RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO44 (Homo sapiens)

Ensembl gene IDs: ENSG00000132879

Ensembl transcript IDs: ENST00000251546.8, ENST00000251547.10, ENST00000376760.5, ENST00000376762.8, ENST00000376768.5, ENST00000376770.5, ENST00000425796.5, ENST00000471895.1, ENST00000475435.5

Found 507 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCTGTGGCTGGGCCTCCAGAGGAAGCCAGCAGTACTGGACGGCTaGCAGGTGAGATACCTGCAGCTCACTGAGGGGTCTGCCCATGAA +
Preference number: 1 (lower is better)
Translates to: SLWLGLQRKPAVLDG*QVRYLQLTEGSAHE
Trigger: TTCATGGGCAGACCCCTCAGTGAGCTGCAGGTATCTCACCTGGCAGCCGTCCAGTACTGCTGGCTTCCTCTGGAGGCCCAGCCACAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR TCA 90 bp GGCTGGGCCTCCAGAGGAAGCCAGCAGTACTGGACGGCTGCCAGGTaGGATACCTGCAGCTCACTGAGGGGTCTGCCCATGAACCTGTTT +
Preference number: 1 (lower is better)
Translates to: GWASRGSQQYWTAAR*DTCSSLRGLPMNLF
Trigger: AAACAGGTTCATGGGCAGACCCCTCAGTGAGCTGCAGGTATCTCACCTGGCAGCCGTCCAGTACTGCTGGCTTCCTCTGGAGGCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR CCA 90 bp TCAGTCCTCTGGGAACCTAACCCCACCTGGTACCCATCTAGCTTCTaGGGCTCCACTGACAGTGAGGACAGTCCACACCCGACCTGGACC +
Preference number: 1 (lower is better)
Translates to: SVLWEPNPTWYPSSF*GSTDSEDSPHPTWT
Trigger: GGTCCAGGTCGGGTGTGGACTGTCCTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTTCCCAGAGGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR GCA 90 bp CACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTaGTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGGGG +
Preference number: 1 (lower is better)
Translates to: HHQGSCKLASCLACP*SEGQRTQVEWSQEG
Trigger: CCCCTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR GCA 90 bp CCTGCACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTaGCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTC +
Preference number: 1 (lower is better)
Translates to: PAPAPSGQLQACQLS*LSLLRGSKNTGRMV
Trigger: GACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR GCA 90 bp CACCCTCCACTTCCCAGATTGGTCAGAGTTACATGGTCACCTCCCTaGACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTG +
Preference number: 1 (lower is better)
Translates to: HPPLPRLVRVTWSPP*TCTIRAAASLPVVL
Trigger: CAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGTGCAGGGAGGTGACCATGTAACTCTGACCAATCTGGGAAGTGGAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR GCA 90 bp TCATCCAGGGCTCATGTGTCCAGCTGTCAGAGCAGGTCCCAATCCTaGTCCCCATCTACCCTGGGACATCCTGTACAGGATTCCCTCAGT +
Preference number: 1 (lower is better)
Translates to: SSRAHVSSCQSRSQS*SPSTLGHPVQDSLS
Trigger: ACTGAGGGAATCCTGTACAGGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGACACATGAGCCCTGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR CCA 90 bp TGTCCAGCTGTCAGAGCAGGTCCCAATCCTGCTCCCCATCTACCCTaGGACATCCTGTACAGGATTCCCTCAGTCCTCTGGGAACCTAAC +
Preference number: 1 (lower is better)
Translates to: CPAVRAGPNPAPHLP*DILYRIPSVLWEPN
Trigger: GTTAGGTTCCCAGAGGACTGAGGGAATCCTGTACAGGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR CCA 90 bp CTATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTaGGAGACAGAGGTCTTGGGAATGGCAGTTCTAGGGGTGGGGTGG +
Preference number: 1 (lower is better)
Translates to: LSFQQDKRQVPRVVG*ETEVLGMAVLGVGW
Trigger: CCACCCCACCCCTAGAACTGCCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR GCA 90 bp CCAACCCCTCTGTACCTTAGACAGAAGCCATGCCATTGTACCATCTaGAGGTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGA +
Preference number: 1 (lower is better)
Translates to: PTPLYLRQKPCHCTI*RSRQDHLKSAFPSR
Trigger: TCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGACCTGCAGATGGTACAATGGCATGGCTTCTGTCTAAGGTACAGAGGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR CCA 90 bp CAGCTCACTGAGGGGTCTGCCCATGAACCTGTTTCTGTGATGGCCTaGTTCCTGAAATGCCAACCCCTCTGTACCTTAGACAGAAGCCAT +
Preference number: 1 (lower is better)
Translates to: QLTEGSAHEPVSVMA*FLKCQPLCTLDRSH
Trigger: ATGGCTTCTGTCTAAGGTACAGAGGGGTTGGCATTTCAGGAACCAGGCCATCACAGAAACAGGTTCATGGGCAGACCCCTCAGTGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR GCA 90 bp CTGGTTCCTGAAATGCCAACCCCTCTGTACCTTAGACAGAAGCCATaGCATTGTACCATCTGCAGGTCCAGGCAGGACCACCTAAAGTCT +
Preference number: 1 (lower is better)
Translates to: LVPEMPTPLYLRQKP*HCTICRSRQDHLKS
Trigger: AGACTTTAGGTGGTCCTGCCTGGACCTGCAGATGGTACAATGGCATGGCTTCTGTCTAAGGTACAGAGGGGTTGGCATTTCAGGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR GCA 90 bp ACCTTTTATTTGGCTGCATGCAGTAGGGCGAAGTCAGGAGAACACTaGTATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTG +
Preference number: 1 (lower is better)
Translates to: TFYLAACSRAKSGEH*YLSSRTRGKFQGWL
Trigger: CAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTTCGCCCTACTGCATGCAGCCAAATAAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR CCA 90 bp TCCAGAAACCACAGGGCACAGGTTAGACTGGGCACACCTTTTATTTaGCTGCATGCAGTAGGGCGAAGTCAGGAGAACACTGCTATCTTT +
Preference number: 1 (lower is better)
Translates to: SRNHRAQVRLGTPFI*LHAVGRSQENTAIF
Trigger: AAAGATAGCAGTGTTCTCCTGACTTCGCCCTACTGCATGCAGCCAAATAAAAGGTGTGCCCAGTCTAACCTGTGCCCTGTGGTTTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR-3UTR TCA 90 bp GAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGGATCTCAGTCCCGGCCTaGGCCTCTGGGCCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: ECSPSQRGPGLDLGGGQGISVPA*ASGPKP
Trigger: TGGCTTTGGCCCAGAGGCTCAGGCCGGGACTGAGAT...CCCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp GAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGGGGCAGAGCGAGAGACTaGGAGCAGCAGACAGGGGCA +
Preference number: 2 (lower is better)
Translates to: ECSPSQRGPGLDLGGGQGGRARD*EQQTGA
Trigger: TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCC...CCCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp GGGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGCCCGGCCTGAGCCTCTaGGCCAAAGCCACCTCTTCT +
Preference number: 2 (lower is better)
Translates to: GAWNALQARGGRAWIWEVPGLSL*AKATSS
Trigger: AGAAGAGGTGGCTTTGGCCCAGAGGCTCAGGCCGGG...CACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR TCA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCACAGGTGCTCCGTCTCTaGAAGGGGCACACGCAGGCT +
Preference number: 2 (lower is better)
Translates to: TSSEQAGRARDWEQQTGAQVLRL*KGHTQA
Trigger: AGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTG...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR GCA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCATCACCTCCCTGCACCTaGACCATCAGGGCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: TSSEQAGRARDWEQQTGASPPCT*TIRAAA
Trigger: TGCAGCTGCCCTGATGGTGCAGGTGCAGGGAGGTGA...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp GGGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGATTCCCTCAGTCCTCTaGGAACCTAACCCCACCTGG +
Preference number: 2 (lower is better)
Translates to: GAWNALQARGGRAWIWEVIPSVL*EPNPTW
Trigger: CCAGGTGGGGTTAGGTTCCCAGAGGACTGAGGGAAT...CACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp GGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGATTCCCTCAGTCCTCTaGGAACCTAACCCCACCTGG +
Preference number: 2 (lower is better)
Translates to: GLGMLSKPEGAGPGFGRWIPSVL*EPNPTW
Trigger: CCAGGTGGGGTTAGGTTCCCAGAGGACTGAGGGAAT...CCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR GCA 90 bp GTCCAGCTGTCAGAGCAGGTCCCAATCCTGCTCCCCATCTACCCTGGGACATCCTCACCTCCCTGCACCTaGACCATCAGGGCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: VQLSEQVPILLPIYPGTSSPPCT*TIRAAA
Trigger: TGCAGCTGCCCTGATGGTGCAGGTGCAGGGAGGTGA...GGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp GGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGGAACCTAACCCCACCTaGTACCCATCTAGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: GLGMLSKPEGAGPGFGRWEPNPT*YPSSFW
Trigger: CCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTTC...CCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp GGGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGAACCTAACCCCACCTaGTACCCATCTAGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: GAWNALQARGGRAWIWEVEPNPT*YPSSFW
Trigger: CCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTTC...CACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR TCA 90 bp CTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGCAGGTGCTCCGTCTCTaGAAGGGGCACACGCAGGCT +
Preference number: 2 (lower is better)
Translates to: LACPCSEGQRTQVEWSQEQVLRL*KGHTQA
Trigger: AGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTG...CTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR GCA 90 bp CCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCTCCCACATCTCAGGTaGTCCGTCTCTGAAAGGGGC +
Preference number: 2 (lower is better)
Translates to: PAPSGQLQACQLSCLSLLLPHLR*SVSERG
Trigger: GCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAG...GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR GCA 90 bp TGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGCCCAGGGGAACATGCTaGACCTCCCACATCTCAGGT +
Preference number: 2 (lower is better)
Translates to: CTIRAAASLPVVLPVPAPPRGTC*TSHISG
Trigger: ACCTGAGATGTGGGAGGTGCAGCATGTTCCCCTGGG...CGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGCCTTTCGGGGAGAGCTaGCCCGACCCCAGCATGCGA +
Preference number: 2 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWPFGES*PDPSMR
Trigger: TCGCATGCTGGGGTCGGGCCAGCTCTCCCCGAAAGG...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGAGAGGGGGCCGGGCCTaGATTTGGGAGGTGGACAGG +
Preference number: 2 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWRGGRA*IWEVDR
Trigger: CCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCT...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR CAA 90 bp CACCTCCCTGCACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTaGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGA +
Preference number: 2 (lower is better)
Translates to: HLPAPAPSGQLQACQ*SCLSLLRGSKNTGR
Trigger: TCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGTGCAGGGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR TCA 90 bp AGAGCACGGCCCATGAGCCCACCCTCCACTTCCCAGATTGGTCAGAGTTACATGCCAAGCTCGACTTTCTaGGGGGCCCAGGGGAACATG +
Preference number: 2 (lower is better)
Translates to: RARPMSPPSTSQIGQSYMPSSTF*GAQGNM
Trigger: CATGTTCCCCTGGGCCCCTCAGAAAGTCGAGCTTGG...CATGTAACTCTGACCAATCTGGGAAGTGGAGGGTGGGCTCATGGGCCGTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR GCA 90 bp ACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCTCCCACATCTCAGGTaGTCCGTCTCTGAAAGGGGC +
Preference number: 2 (lower is better)
Translates to: TCTIRAAASLPVVLPVPALPHLR*SVSERG
Trigger: GCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAG...AGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR GCA 90 bp ACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCCAGGGGAACATGCTaGACCTCCCACATCTCAGGT +
Preference number: 2 (lower is better)
Translates to: TCTIRAAASLPVVLPVPAPRGTC*TSHISG
Trigger: ACCTGAGATGTGGGAGGTGCAGCATGTTCCCCTGGG...AGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR GCA 90 bp AACCTAACCCCACCTGGTACCCATCTAGCTTCTGGGGCTCCACTGACAGTGAGGGCTTGCCAGTTGTCTTaGCTGTCCCTGCTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: NLTPPGTHLASGAPLTVRACQLS*LSLLRG
Trigger: CCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGC...CCTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR GCA 90 bp GTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACAGGGCACAGGTGGGGGCTTGGAATaGTCTCCAAGCCAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: VQAGPPKVCLSFQKPQGTGGGLE*SPSQRG
Trigger: CCCCCTCTGGCTTGGAGAGCATTCCAAGCCCCCACC...TGTGCCCTGTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR-3UTR GCA 90 bp CTGCTATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGGGTGGGGGCTTGGAATaGTCTCCAAGCCAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: LLSFQQDKRQVPRVVGWEGGGLE*SPSQRG
Trigger: CCCCCTCTGGCTTGGAGAGCATTCCAAGCCCCCACC...CTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp CAGCTCACTGAGGGGTCTGCCCATGAACCTGTTTCTGTGATGGCCTGGTTCCTGCAAGGGTTAGAGGTCTaGGGACACCTGGCCTCCACC +
Preference number: 2 (lower is better)
Translates to: QLTEGSAHEPVSVMAWFLQGLEV*GHLAST
Trigger: GGTGGAGGCCAGGTGTCCCCAGACCTCTAACCCTTG...CAGGAACCAGGCCATCACAGAAACAGGTTCATGGGCAGACCCCTCAGTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR-3UTR CCA 90 bp GTCCAGCTGTCAGAGCAGGTCCCAATCCTGCTCCCCATCTACCCTGGGACATCCGAGACAGATCCAGGCTaGCCTCCAAGCTCGACTTTC +
Preference number: 2 (lower is better)
Translates to: VQLSEQVPILLPIYPGTSETDPG*PPSSTF
Trigger: GAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTC...GGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp AGACAGGGGCAGAGCACGGCCCATGAGCCCACCCTCCACTTCCCAGATTGGTCAAGAACACAGGTAGAATaGTCCCAGGAGGGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: RQGQSTAHEPTLHFPDWSRTQVE*SQEGKG
Trigger: TCCCTTCCCCTCCTGGGACCATTCTACCTGTGTTCT...TGACCAATCTGGGAAGTGGAGGGTGGGCTCATGGGCCGTGCTCTGCCCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGCCCGGCCTGAGCCTCTaGGCCAAAGCCACCTCTTCT +
Preference number: 2 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWPGLSL*AKATSS
Trigger: AGAAGAGGTGGCTTTGGCCCAGAGGCTCAGGCCGGG...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR TCA 90 bp AGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACAGGGCACAGGTTCAGGTGCTCCGTCTCTaGAAGGGGCACACGCAGGCT +
Preference number: 2 (lower is better)
Translates to: RQDHLKSAFPSRNHRAQVQVLRL*KGHTQA
Trigger: AGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTG...AACCTGTGCCCTGTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR-3UTR TCA 90 bp TATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGCAGGTGCTCCGTCTCTaGAAGGGGCACACGCAGGCT +
Preference number: 2 (lower is better)
Translates to: YLSSRTRGKFQGWLAGRQQVLRL*KGHTQA
Trigger: AGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTG...CTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR TCA 90 bp TGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCATCTCAGTCCCGGCCTaGGCCTCTGGGCCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: WTGDSSNPLPYSSRAHVSISVPA*ASGPKP
Trigger: TGGCTTTGGCCCAGAGGCTCAGGCCGGGACTGAGAT...GGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR TCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCCCGTCACATTCAAGATaGGATGTGGGTGGGGACACA +
Preference number: 2 (lower is better)
Translates to: VEGEGEATTFFTWRQEGAPSHSR*DVGGDT
Trigger: TGTGTCCCCACCCACATCTCATCTTGAATGTGACGG...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471895.1
3UTR-3UTR GCA 90 bp AACCTAACCCCACCTGGTACCCATCTAGCTTCTGGGGCTCCACTGACAGTGAGGACATGGTCACCTCCCTaGACCTGCACCATCAGGGCA +
Preference number: 2 (lower is better)
Translates to: NLTPPGTHLASGAPLTVRTWSPP*TCTIRA
Trigger: TGCCCTGATGGTGCAGGTGCAGGGAGGTGACCATGT...CCTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGCAAGGGTTAGAGGTCTaGGGACACCTGGCCTCCACC +
Preference number: 2 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWQGLEV*GHLAST
Trigger: GGTGGAGGCCAGGTGTCCCCAGACCTCTAACCCTTG...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp CCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCAGAACACAGGTAGAATaGTCCCAGGAGGGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: PAPSGQLQACQLSCLSLLRTQVE*SQEGKG
Trigger: TCCCTTCCCCTCCTGGGACCATTCTACCTGTGTTCT...GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp TGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCGGCAGAGCGAGAGACTaGGAGCAGCAGACAGGGGCA +
Preference number: 2 (lower is better)
Translates to: WTGDSSNPLPYSSRAHVSGRARD*EQQTGA
Trigger: TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCC...GGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGGGTGGGGTGGGGGCTTaGAATGCTCTCCAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWGGVGA*NALQAR
Trigger: TCTGGCTTGGAGAGCATTCCAAGCCCCCACCCCACC...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR TCA 90 bp GGATTTGGGAGGTGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGCAAAGCCACCTCTTCTaGGCAGGCAGGCAGAGCGAG +
Preference number: 2 (lower is better)
Translates to: GFGRWTGDSSNPLPYSSRQSHLF*AGRQSE
Trigger: CTCGCTCTGCCTGCCTGCTCAGAAGAGGTGGCTTTG...CCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCCAAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp CAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCAAGGGTTAGAGGTCTaGGGACACCTGGCCTCCACC +
Preference number: 2 (lower is better)
Translates to: QLSCLSLLRGSKNTGRMVQGLEV*GHLAST
Trigger: GGTGGAGGCCAGGTGTCCCCAGACCTCTAACCCTTG...GACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp CATCTACCCTGGGACATCCTGTACAGGATTCCCTCAGTCCTCTGGGAACCTAACCAAGGGTTAGAGGTCTaGGGACACCTGGCCTCCACC +
Preference number: 2 (lower is better)
Translates to: HLPWDILYRIPSVLWEPNQGLEV*GHLAST
Trigger: GGTGGAGGCCAGGTGTCCCCAGACCTCTAACCCTTG...GTTAGGTTCCCAGAGGACTGAGGGAATCCTGTACAGGATGTCCCAGGGTAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp AGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACAGGGCACAGGTTGGTGGGGTGGGGGCTTaGAATGCTCTCCAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: RQDHLKSAFPSRNHRAQVGGVGA*NALQAR
Trigger: TCTGGCTTGGAGAGCATTCCAAGCCCCCACCCCACC...AACCTGTGCCCTGTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR-3UTR CCA 90 bp TATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGGGTGGGGTGGGGGCTTaGAATGCTCTCCAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: YLSSRTRGKFQGWLAGRQGGVGA*NALQAR
Trigger: TCTGGCTTGGAGAGCATTCCAAGCCCCCACCCCACC...CTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp ATCTGCAGGTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACGGTGGGGTGGGGGCTTaGAATGCTCTCCAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: ICRSRQDHLKSAFPSRNHGGVGA*NALQAR
Trigger: TCTGGCTTGGAGAGCATTCCAAGCCCCCACCCCACC...GTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGACCTGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR-3UTR CCA 90 bp CTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGAGCTTGCAGTAGGAACTTACAATCATaGTGGTGGAAGGTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: LQRLRQVNGANLGGRACSRNLQS*WWKVKG
Trigger: CCCCTTCACCTTCCACCACCATGATTGTAAGTTCCT...ACTGCAAGCTCTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
3UTR-3UTR TCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCCCCTGGCCAACATGGTaGAACTCCATCTCTAAATCA +
Preference number: 2 (lower is better)
Translates to: VEGEGEATTFFTWRQEGAPWPTW*NSISKS
Trigger: TGATTTAGAGATGGAGTTTCACCATGTTGGCCAGGG...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471895.1
3UTR-3UTR GCA 90 bp GGATTTGGGAGGTGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGCTCCCACATCTCAGGTaGTCCGTCTCTGAAAGGGGC +
Preference number: 2 (lower is better)
Translates to: GFGRWTGDSSNPLPYSSRLPHLR*SVSERG
Trigger: GCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAG...CCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCCAAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR GCA 90 bp TGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCGGGCAGCTGCAAGCTTaGCAGTTGTCTTGCCTGTCC +
Preference number: 2 (lower is better)
Translates to: WTGDSSNPLPYSSRAHVSGQLQA*QLSCLS
Trigger: GGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCC...GGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR GCA 90 bp CATCTACCCTGGGACATCCTGTACAGGATTCCCTCAGTCCTCTGGGAACCTAACACATGGTCACCTCCCTaGACCTGCACCATCAGGGCA +
Preference number: 2 (lower is better)
Translates to: HLPWDILYRIPSVLWEPNTWSPP*TCTIRA
Trigger: TGCCCTGATGGTGCAGGTGCAGGGAGGTGACCATGT...GTTAGGTTCCCAGAGGACTGAGGGAATCCTGTACAGGATGTCCCAGGGTAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp CAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGCTGTCAGAGCAGGTGAGACAGATCCAGGCTaGCCTCCAAGCTCGACTTTC +
Preference number: 2 (lower is better)
Translates to: QTPYHTHPGLMCPAVRAGETDPG*PPSSTF
Trigger: GAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTC...ACCTGCTCTGACAGCTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp GGGAGGTGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGAGACAGATCCAGGCTaGCCTCCAAGCTCGACTTTC +
Preference number: 2 (lower is better)
Translates to: GRWTGDSSNPLPYSSRAHETDPG*PPSSTF
Trigger: GAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTC...ATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp CAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGATTGGTCAGAGTTACATaGTCACCTCCCTGCACCTGC +
Preference number: 2 (lower is better)
Translates to: QDKRQVPRVVGWETEVLGLVRVT*SPPCTC
Trigger: GCAGGTGCAGGGAGGTGACCATGTAACTCTGACCAA...TCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp GTCCAGCTGTCAGAGCAGGTCCCAATCCTGCTCCCCATCTACCCTGGGACATCCCTCCACTTCCCAGATTaGTCAGAGTTACATGGTCAC +
Preference number: 2 (lower is better)
Translates to: VQLSEQVPILLPIYPGTSLHFPD*SELHGH
Trigger: GTGACCATGTAACTCTGACCAATCTGGGAAGTGGAG...GGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp GTTCCTGAAATGCCAACCCCTCTGTACCTTAGACAGAAGCCATGCCATTGTACCCCCGGCCTGAGCCTCTaGGCCAAAGCCACCTCTTCT +
Preference number: 2 (lower is better)
Translates to: VPEMPTPLYLRQKPCHCTPGLSL*AKATSS
Trigger: AGAAGAGGTGGCTTTGGCCCAGAGGCTCAGGCCGGG...GGTACAATGGCATGGCTTCTGTCTAAGGTACAGAGGGGTTGGCATTTCAGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR-3UTR GCA 90 bp GTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACAGGGCACATGTCTTGCCTGTCCCTaGTCCGAGGGTCAAAGAACA +
Preference number: 2 (lower is better)
Translates to: VQAGPPKVCLSFQKPQGTCLACP*SEGQRT
Trigger: TGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACA...TGTGCCCTGTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR-3UTR GCA 90 bp CTGCTATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGCACCATCAGGGCAGCTaGAAGCTTGCCAGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: LLSFQQDKRQVPRVVGWEHHQGS*KLASCL
Trigger: AAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTG...CTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp CTGCTATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGTACCCATCTAGCTTCTaGGGCTCCACTGACAGTGAG +
Preference number: 2 (lower is better)
Translates to: LLSFQQDKRQVPRVVGWEYPSSF*GSTDSE
Trigger: CTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTA...CTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCTCTAAATCATGGTGGTaGAAGGTGAAGGGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: VEGEGEATTFFTWRQEGASKSWW*KVKGKQ
Trigger: TTGCTTCCCCTTCACCTTCCACCACCATGATTTAGA...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471895.1
3UTR-3UTR CCA 90 bp GTAGGGCGAAGTCAGGAGAACACTGCTATCTTTCCAGCAGGACAAGAGGCAAGTGAGACAGATCCAGGCTaGCCTCCAAGCTCGACTTTC +
Preference number: 2 (lower is better)
Translates to: VGRSQENTAIFPAGQEASETDPG*PPSSTF
Trigger: GAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTC...ACTTGCCTCTTGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTTCGCCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp CATCTACCCTGGGACATCCTGTACAGGATTCCCTCAGTCCTCTGGGAACCTAACTTGGTCAGAGTTACATaGTCACCTCCCTGCACCTGC +
Preference number: 2 (lower is better)
Translates to: HLPWDILYRIPSVLWEPNLVRVT*SPPCTC
Trigger: GCAGGTGCAGGGAGGTGACCATGTAACTCTGACCAA...GTTAGGTTCCCAGAGGACTGAGGGAATCCTGTACAGGATGTCCCAGGGTAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGCCTGGATTTGGGAGGTaGACAGGGGATTCTTCAAAC +
Preference number: 2 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWPGFGR*TGDSSN
Trigger: GTTTGAAGAATCCCCTGTCCACCTCCCAAATCCAGG...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR TCA 90 bp ATCTGCAGGTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACAGCCCAGCCCTTTTCTaGCAGCAGTTGTTTACCAGT +
Preference number: 2 (lower is better)
Translates to: ICRSRQDHLKSAFPSRNHSPALF*QQLFTS
Trigger: ACTGGTAAACAACTGCTGTCAGAAAAGGGCTGGGCT...GTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGACCTGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR-3UTR TCA 90 bp TATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGCCCAGCCCTTTTCTaGCAGCAGTTGTTTACCAGT +
Preference number: 2 (lower is better)
Translates to: YLSSRTRGKFQGWLAGRQSPALF*QQLFTS
Trigger: ACTGGTAAACAACTGCTGTCAGAAAAGGGCTGGGCT...CTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR-3UTR GCA 90 bp CATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGCACCATCAGGGCAGCTaGAAGCTTGCCAGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: HENSMGENRSHNPITSHQHHQGS*KLASCL
Trigger: AAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTG...CTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR-3UTR CCA 90 bp GTAGGGCGAAGTCAGGAGAACACTGCTATCTTTCCAGCAGGACAAGAGGCAAGTGAACCTAACCCCACCTaGTACCCATCTAGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: VGRSQENTAIFPAGQEASEPNPT*YPSSFW
Trigger: CCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTTC...ACTTGCCTCTTGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTTCGCCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGTCCATCTCTAAATCATaGTGGTGGAAGGTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQSISKS*WWKVKG
Trigger: CCCCTTCACCTTCCACCACCATGATTTAGAGATGGA...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471895.1
3UTR-3UTR CCA 90 bp GACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGCTCCACTTCCCAGATTaGTCAGAGTTACATGGTCAC +
Preference number: 2 (lower is better)
Translates to: DRGFFKPPTILIQGSCVQLHFPD*SELHGH
Trigger: GTGACCATGTAACTCTGACCAATCTGGGAAGTGGAG...CTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CCA 90 bp TCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCAAGAACACAGGTAGAATaGTCCCAGGAGGGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: SLTIMRTAWGKTAPIIQSRTQVE*SQEGKG
Trigger: TCCCTTCCCCTCCTGGGACCATTCTACCTGTGTTCT...TGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR-3UTR CCA 90 bp TTGACTTATAGTTCCATATGGCTGGGGAAGCCTCAAGAAACAATCGCTGGGCGCATCTCTAAATCATGGTaGTGGAAGGTGAAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: LTYSSIWLGKPQETIAGRISKSW*WKVKGK
Trigger: CTTCCCCTTCACCTTCCACCACCATGATTTAGAGAT...GCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471895.1
3UTR-3UTR TCA 90 bp TCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCAGATTACCATTCAAGATaGGATGTGGGTGGGGACACA +
Preference number: 2 (lower is better)
Translates to: SLTIMRTAWGKTAPIIQSDYHSR*DVGGDT
Trigger: TGTGTCCCCACCCACATCTCATCTTGAATGGTAATC...TGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
3UTR CCA 72 bp CGGCCATCATTCAGGTCAAGACCTTTCGGGGAGAGCTaGCCCGACCCCAGCATGCGAGGGCTGCCCACACTG +
Preference number: 3 (lower is better)
Translates to: RPSFRSRPFGES*PDPSMRGLPTL
Trigger: CAGTGTGGGCAGCCCTCGCATGCTGGGGTCGGGCCAGCTCTCCCCGAAAGGTCTTGACCTGAATGATGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CAA 90 bp GGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGAGCTTGCCAGTTGTCTaGCCTGTCCCTGCTCCGAGG +
Preference number: 3 (lower is better)
Translates to: GMLSKPEGAGPGFGRWTGSLPVV*PVPAPR
Trigger: CCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCT...CCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR GCA 72 bp GCCCAGGGGAACATGCTGCACCTCCCACATCTCAGGTaGTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCC +
Preference number: 3 (lower is better)
Translates to: AQGNMLHLPHLR*SVSERGTRRLP
Trigger: GGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAGGTGCAGCATGTTCCCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR CCA 72 bp CCTGGGTCTGTCCATCTCAGTCCCGGCCTGAGCCTCTaGGCCAAAGCCACCTCTTCTGAGCAGGCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: PGSVHLSPGLSL*AKATSSEQAGR
Trigger: TCTGCCTGCCTGCTCAGAAGAGGTGGCTTTGGCCCAGAGGCTCAGGCCGGGACTGAGATGGACAGACCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CAA 90 bp GGGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGCTGCAAGCTTGCCAGTaGTCTTGCCTGTCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: GAWNALQARGGRAWIWEVLQACQ*SCLSLL
Trigger: GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAG...CACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR GCA 72 bp CTCCCTGCACCTGCACCATCAGGGCAGCTGCAAGCTTaGCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCA +
Preference number: 3 (lower is better)
Translates to: LPAPAPSGQLQA*QLSCLSLLRGS
Trigger: TGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGTGCAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR GCA 72 bp CTGGGCCTCCAGAGGAAGCCAGCAGTACTGGACGGCTaGCAGGTGAGATACCTGCAGCTCACTGAGGGGTCT +
Preference number: 3 (lower is better)
Translates to: LGLQRKPAVLDG*QVRYLQLTEGS
Trigger: AGACCCCTCAGTGAGCTGCAGGTATCTCACCTGGCAGCCGTCCAGTACTGCTGGCTTCCTCTGGAGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR TCA 72 bp CATGCTGCACCTCCCACATCTCAGGTGCTCCGTCTCTaGAAGGGGCACACGCAGGCTTCCCCGGCCATCATT +
Preference number: 3 (lower is better)
Translates to: HAAPPTSQVLRL*KGHTQASPAII
Trigger: AATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAGGTGCAGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR TCA 72 bp TCCAGAGGAAGCCAGCAGTACTGGACGGCTGCCAGGTaGGATACCTGCAGCTCACTGAGGGGTCTGCCCATG +
Preference number: 3 (lower is better)
Translates to: SRGSQQYWTAAR*DTCSSLRGLPM
Trigger: CATGGGCAGACCCCTCAGTGAGCTGCAGGTATCTCACCTGGCAGCCGTCCAGTACTGCTGGCTTCCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR-3UTR CAA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGGGGTGGGGTGGGGGCTaGGAATGCTCTCCAAGCCAG +
Preference number: 3 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWGWGGG*ECSPSQ
Trigger: CTGGCTTGGAGAGCATTCCAAGCCCCCACCCCACCC...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR CCA 72 bp TGGGAACCTAACCCCACCTGGTACCCATCTAGCTTCTaGGGCTCCACTGACAGTGAGGACAGTCCACACCCG +
Preference number: 3 (lower is better)
Translates to: WEPNPTWYPSSF*GSTDSEDSPHP
Trigger: CGGGTGTGGACTGTCCTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR CCA 72 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATaGCGGCAGGAGGGAGCCGGGGAAACCGTCACTTGT +
Preference number: 3 (lower is better)
Translates to: VEGEGEATTFFT*RQEGAGETVTC
Trigger: ACAAGTGACGGTTTCCCCGGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
3UTR CCA 72 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATaGCGGCAGGAGGGAGCCGGGGAAACCGTCACATTC +
Preference number: 3 (lower is better)
Translates to: VEGEGEATTFFT*RQEGAGETVTF
Trigger: GAATGTGACGGTTTCCCCGGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471895.1
3UTR GCA 72 bp GCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTaGCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGT +
Preference number: 3 (lower is better)
Translates to: APSGQLQACQLS*LSLLRGSKNTG
Trigger: ACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CAA 90 bp TGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGCTTGCCAGTTGTCTaGCCTGTCCCTGCTCCGAGG +
Preference number: 3 (lower is better)
Translates to: WTGDSSNPLPYSSRAHVSSLPVV*PVPAPR
Trigger: CCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCT...GGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CAA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGCTGCAAGCTTGCCAGTaGTCTTGCCTGTCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWLQACQ*SCLSLL
Trigger: GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAG...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR GCA 72 bp GGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTaGTCCGAGGGTCAAAGAACACAGGTAGAATGGTCC +
Preference number: 3 (lower is better)
Translates to: GSCKLASCLACP*SEGQRTQVEWS
Trigger: GGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR CCA 72 bp CCCTGGGACATCCTGTACAGGATTCCCTCAGTCCTCTaGGAACCTAACCCCACCTGGTACCCATCTAGCTTC +
Preference number: 3 (lower is better)
Translates to: PWDILYRIPSVL*EPNPTWYPSSF
Trigger: GAAGCTAGATGGGTACCAGGTGGGGTTAGGTTCCCAGAGGACTGAGGGAATCCTGTACAGGATGTCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR CCA 72 bp CAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTaGGAGACAGAGGTCTTGGGAATGGCAGTTCTAGGG +
Preference number: 3 (lower is better)
Translates to: QQDKRQVPRVVG*ETEVLGMAVLG
Trigger: CCCTAGAACTGCCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR-3UTR CAA 90 bp GACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGCTGCAAGCTTGCCAGTaGTCTTGCCTGTCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: DRGFFKPPTILIQGSCVQLQACQ*SCLSLL
Trigger: GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAG...CTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
3UTR GCA 72 bp GAAATGCCAACCCCTCTGTACCTTAGACAGAAGCCATaGCATTGTACCATCTGCAGGTCCAGGCAGGACCAC +
Preference number: 3 (lower is better)
Translates to: EMPTPLYLRQKP*HCTICRSRQDH
Trigger: GTGGTCCTGCCTGGACCTGCAGATGGTACAATGGCATGGCTTCTGTCTAAGGTACAGAGGGGTTGGCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR GCA 72 bp CTGTACCTTAGACAGAAGCCATGCCATTGTACCATCTaGAGGTCCAGGCAGGACCACCTAAAGTCTGCCTTT +
Preference number: 3 (lower is better)
Translates to: LYLRQKPCHCTI*RSRQDHLKSAF
Trigger: AAAGGCAGACTTTAGGTGGTCCTGCCTGGACCTGCAGATGGTACAATGGCATGGCTTCTGTCTAAGGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR CCA 72 bp TCTCGTGAGAACTCACTCACTATCATGAGAACAGCATaGGGGAAAACCGCTCCCATAATCCAATCACTTCCC +
Preference number: 3 (lower is better)
Translates to: SRENSLTIMRTA*GKTAPIIQSLP
Trigger: GGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGAGTTCTCACGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR TCA 90 bp GGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGGCCTCCTCGGTCCGCTaGGGAACCCGCAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GMLSKPEGAGPGFGRWTGASSVR*GTRSPG
Trigger: CCCGGGGCTGCGGGTTCCTCAGCGGACCGAGGAGGC...CCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251546.8
CDS-3UTR CCA 90 bp GGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGCCTCGAGCAGACTGCTaGGACTGCGGGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GMLSKPEGAGPGFGRWTGPRADC*DCGAAG
Trigger: CCCGGCCGCCCCGCAGTCCCAGCAGTCTGCTCGAGG...CCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251546.8
CDS-3UTR CCA 90 bp GAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGGGGACCTGCGCTTGCCTaGAAAGCGAGGCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ECSPSQRGPGLDLGGGQGGPALA*KARPRP
Trigger: GGGGCGGGGCCTCGCTTTCCAGGCAAGCGCAGGTCC...CCCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000376770.5
CDS-3UTR GCA 90 bp GTCCAGCTGTCAGAGCAGGTCCCAATCCTGCTCCCCATCTACCCTGGGACATCCGGGCCTCGAGCAGACTaGTGGGACTGCGGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VQLSEQVPILLPIYPGTSGPRAD*WDCGAA
Trigger: GGCCGCCCCGCAGTCCCAGCAGTCTGCTCGAGGCCC...GGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251546.8
CDS-3UTR CCA 90 bp GGTGCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTGTCGCCGGGTCTGGCTaGAAGGTCCCCAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: GAPSLKGAHAGFPGHHSGVAGSG*KVPRGA
Trigger: CGCGCCTCTGGGGACCTTCCAGCCAGACCCGGCGAC...ACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GTCTCAGCTACTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGGTCGCCGGGTCTGGCTaGAAGGTCCCCAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: VSATPEAEAGEWREPGRQVAGSG*KVPRGA
Trigger: CGCGCCTCTGGGGACCTTCCAGCCAGACCCGGCGAC...CTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAGTAGCTGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp GGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGCCTTTCGGGGAGAGCTaGCCCGACCCCAGCATGCGA +
Preference number: 4 (lower is better)
Translates to: GMLSKPEGAGPGFGRWTGPFGES*PDPSMR
Trigger: TCGCATGCTGGGGTCGGGCCAGCTCTCCCCGAAAGG...CCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GTCCAGCTGTCAGAGCAGGTCCCAATCCTGCTCCCCATCTACCCTGGGACATCCGTCGCCGGGTCTGGCTaGAAGGTCCCCAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: VQLSEQVPILLPIYPGTSVAGSG*KVPRGA
Trigger: CGCGCCTCTGGGGACCTTCCAGCCAGACCCGGCGAC...GGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCGTCGCCGGGTCTGGCTaGAAGGTCCCCAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: HLHHQGSCKLASCLACPCVAGSG*KVPRGA
Trigger: CGCGCCTCTGGGGACCTTCCAGCCAGACCCGGCGAC...GCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGCGCTCTTCTGCTGGATaGTCGCCGGGTCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GLGMLSKPEGAGPGFGRWRSSAG*SPGLAG
Trigger: TCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCG...CCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGGCCCGGCCTGAGCCTCTaGGCCAAAGCCACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ECSPSQRGPGLDLGGGQGPGLSL*AKATSS
Trigger: AGAAGAGGTGGCTTTGGCCCAGAGGCTCAGGCCGGG...CCCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp GAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGGTCTCGGGCAGCTCGTTaGTGTTCCCCACAGCCATGG +
Preference number: 4 (lower is better)
Translates to: ECSPSQRGPGLDLGGGQGSRAAR*CSPQPW
Trigger: CCATGGCTGTGGGGAACATCAACGAGCTGCCCGAGA...CCCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp GGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGCAAAGCCACCTCTTCTaGGCAGGCAGGCAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: GLGMLSKPEGAGPGFGRWQSHLF*AGRQSE
Trigger: CTCGCTCTGCCTGCCTGCTCAGAAGAGGTGGCTTTG...CCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp CACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCGCCTGGACCTGCGCTTaGCTGGAAAGCGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: HLHHQGSCKLASCLACPCAWTCA*LESEAP
Trigger: CGGGGCCTCGCTTTCCAGGCAAGCGCAGGTCCAGGC...GCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376770.5
CDS-3UTR CCA 90 bp CCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGGATGGTCGCCGGGTCTaGCTGGAAGGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PSGQLQACQLSCLSLLRGDGRRV*LEGPQR
Trigger: CCTCTGGGGACCTTCCAGCCAGACCCGGCGACCATC...CCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCACCTTTCGGGGAGAGCTaGCCCGACCCCAGCATGCGA +
Preference number: 4 (lower is better)
Translates to: TSSEQAGRARDWEQQTGAPFGES*PDPSMR
Trigger: TCGCATGCTGGGGTCGGGCCAGCTCTCCCCGAAAGG...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGGGTGGGGTGGGGGCTTaGAATGCTCTCCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GMLSKPEGAGPGFGRWTGGGVGA*NALQAR
Trigger: TCTGGCTTGGAGAGCATTCCAAGCCCCCACCCCACC...CCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCGCGGCACGATCCGTTaGGCCGCCCAAGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: TCTIRAAASLPVVLPVPARGTIR*AAQAAP
Trigger: CGGTGCAGCTTGGGCGGCCCAACGGATCGTGCCGCG...AGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp GGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGCTCCCACATCTCAGGTaGTCCGTCTCTGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GLGMLSKPEGAGPGFGRWLPHLR*SVSERG
Trigger: GCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAG...CCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp AGACAGGGGCAGAGCACGGCCCATGAGCCCACCCTCCACTTCCCAGATTGGTCAGGTGGGGGCTTGGAATaGTCTCCAAGCCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RQGQSTAHEPTLHFPDWSGGGLE*SPSQRG
Trigger: CCCCCTCTGGCTTGGAGAGCATTCCAAGCCCCCACC...TGACCAATCTGGGAAGTGGAGGGTGGGCTCATGGGCCGTGCTCTGCCCCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp GGTGCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTGGTGGGGGCTTGGAATaGTCTCCAAGCCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GAPSLKGAHAGFPGHHSGGGGLE*SPSQRG
Trigger: CCCCCTCTGGCTTGGAGAGCATTCCAAGCCCCCACC...ACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp GGGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGCAGTACTGGACGGCTaGCAGGTGAGATACCTGCAG +
Preference number: 4 (lower is better)
Translates to: GAWNALQARGGRAWIWEVAVLDG*QVRYLQ
Trigger: CTGCAGGTATCTCACCTGGCAGCCGTCCAGTACTGC...CACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp TGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGGATGGTCGCCGGGTCTaGCTGGAAGGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CTIRAAASLPVVLPVPAPDGRRV*LEGPQR
Trigger: CCTCTGGGGACCTTCCAGCCAGACCCGGCGACCATC...CGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCGATGGTCGCCGGGTCTaGCTGGAAGGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VEGEGEATTFFTWRQEGADGRRV*LEGPQR
Trigger: CCTCTGGGGACCTTCCAGCCAGACCCGGCGACCATC...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CCA 90 bp CCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGGGCAGAGCGAGAGACTaGGAGCAGCAGACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PSGQLQACQLSCLSLLRGGRARD*EQQTGA
Trigger: TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCC...CCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCAGAGGGGGCCGGGCCTaGATTTGGGAGGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: HLHHQGSCKLASCLACPCRGGRA*IWEVDR
Trigger: CCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCT...GCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ATGCTGCACCTCCCACATCTCAGGTGCTCCGTCTCTGAAAGGGGCACACGCAGGAGAGGGGGCCGGGCCTaGATTTGGGAGGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: MLHLPHLRCSVSERGTRRRGGRA*IWEVDR
Trigger: CCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCT...CCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAGGTGCAGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp GGTGCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTTCTCGGGCAGCTCGTTaGTGTTCCCCACAGCCATGG +
Preference number: 4 (lower is better)
Translates to: GAPSLKGAHAGFPGHHSGSRAAR*CSPQPW
Trigger: CCATGGCTGTGGGGAACATCAACGAGCTGCCCGAGA...ACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCAGCGGACGACAGGAGCTaGACGCACAGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: TSSEQAGRARDWEQQTGAADDRS*THSWYL
Trigger: CAAGTACCAGCTGTGCGTTCAGCTCCTGTCGTCCGC...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp GCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAACAGGTGCTCCGTCTCTaGAAGGGGCACACGCAGGCT +
Preference number: 4 (lower is better)
Translates to: APSLKGAHAGFPGHHSGQQVLRL*KGHTQA
Trigger: AGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTG...TTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp GAAGGGAGAGACAGATCCAGGCTGGCCTCCAAGCTCGACTTTCTGAGGGGCCCACAGGTGCTCCGTCTCTaGAAGGGGCACACGCAGGCT +
Preference number: 4 (lower is better)
Translates to: EGRDRSRLASKLDFLRGPQVLRL*KGHTQA
Trigger: AGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTG...TGGGCCCCTCAGAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTCTCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp GTCTCAGCTACTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGCAAAGCCACCTCTTCTaGGCAGGCAGGCAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: VSATPEAEAGEWREPGRQQSHLF*AGRQSE
Trigger: CTCGCTCTGCCTGCCTGCTCAGAAGAGGTGGCTTTG...CTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAGTAGCTGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp ATGCTGCACCTCCCACATCTCAGGTGCTCCGTCTCTGAAAGGGGCACACGCAGGATCTCAGTCCCGGCCTaGGCCTCTGGGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: MLHLPHLRCSVSERGTRRISVPA*ASGPKP
Trigger: TGGCTTTGGCCCAGAGGCTCAGGCCGGGACTGAGAT...CCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAGGTGCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp GGTGCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCCTGGGTGGCACTGCTaGTCTGGCACAAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: GAPSLKGAHAGFPGHHSGPGWHC*SGTRWT
Trigger: AGTCCACCTTGTGCCAGATCAGCAGTGCCACCCAGG...ACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp CCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGGCTTGCCAGTTGTCTTaGCTGTCCCTGCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: PSGQLQACQLSCLSLLRGACQLS*LSLLRG
Trigger: CCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGC...CCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp GCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGGTGGGGGCTTGGAATaGTCTCCAAGCCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: APSLKGAHAGFPGHHSGQGGGLE*SPSQRG
Trigger: CCCCCTCTGGCTTGGAGAGCATTCCAAGCCCCCACC...TTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGTGTTCCCCACAGCCATaGCTTGTGGCTTCTGGACAC +
Preference number: 4 (lower is better)
Translates to: GLGMLSKPEGAGPGFGRWCSPQP*LVASGH
Trigger: GTGTCCAGAAGCCACAAGCCATGGCTGTGGGGAACA...CCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGAGCTTGCTTGGACCCGCAATCTaGCCTGGCTGCGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: ATPEAEAGEWREPGRQSLLGPAI*PGCEPG
Trigger: ACCAGGTTCGCAGCCAGGCCAGATTGCGGGTCCAAG...CAAGCTCTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475435.5
CDS-3UTR CCA 90 bp CCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGCGCACAGCTGGTACTTaGACCCGCAATCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSGQLQACQLSCLSLLRGRTAGT*TRNLAW
Trigger: CCAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCG...CCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGAGCTTGCAGTCGCACAGCTGGTACTTaGACCCGCAATCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LQRLRQVNGANLGGRACSRTAGT*TRNLAW
Trigger: CCAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCG...ACTGCAAGCTCTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGTCGCCGGGTCTGGCTaGAAGGTCCCCAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQVAGSG*KVPRGA
Trigger: CGCGCCTCTGGGGACCTTCCAGCCAGACCCGGCGAC...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCCGCTCTTCTGCTGGATaGTCGCCGGGTCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VEGEGEATTFFTWRQEGARSSAG*SPGLAG
Trigger: TCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCG...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CCA 90 bp TGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGGCATCGCTCTTCTGCTaGATGGTCGCCGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: CTIRAAASLPVVLPVPAPASLFC*MVAGSG
Trigger: GCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGC...CGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGGAGACCTCCCTCCACTTaGCATCGCTCTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ECSPSQRGPGLDLGGGQGRPPST*HRSSAG
Trigger: TCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCT...CCCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCACGCCGGGCGGGTAGTTaGAGAATGTGTGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: TSSEQAGRARDWEQQTGARRAGS*RMCGRP
Trigger: AGGTCTCCCACACATTCTCCAACTACCCGCCCGGCG...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGCGCCGGGCGGGTAGTTaGAGAATGTGTGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: PSGQLQACQLSCLSLLRGRRAGS*RMCGRP
Trigger: AGGTCTCCCACACATTCTCCAACTACCCGCCCGGCG...CCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGAGCTTGTCAGGGTTCAGCAGATaGGGGCTCAGGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: ATPEAEAGEWREPGRQSLSGFSR*GLRGCQ
Trigger: CTGACACCCCCTGAGCCCCCATCTGCTGAACCCTGA...CAAGCTCTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAGTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp GGGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGAGACAGATCCAGGCTaGCCTCCAAGCTCGACTTTC +
Preference number: 4 (lower is better)
Translates to: GAWNALQARGGRAWIWEVETDPG*PPSSTF
Trigger: GAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTC...CACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GAAGGGAGAGACAGATCCAGGCTGGCCTCCAAGCTCGACTTTCTGAGGGGCCCAGGCAGAGCGAGAGACTaGGAGCAGCAGACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: EGRDRSRLASKLDFLRGPGRARD*EQQTGA
Trigger: TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCC...TGGGCCCCTCAGAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTCTCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCGGCAGAGCGAGAGACTaGGAGCAGCAGACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: HLHHQGSCKLASCLACPCGRARD*EQQTGA
Trigger: TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCC...GCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp CCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCTCTCGGGCAGCTCGTTaGTGTTCCCCACAGCCATGG +
Preference number: 4 (lower is better)
Translates to: PAPSGQLQACQLSCLSLLSRAAR*CSPQPW
Trigger: CCATGGCTGTGGGGAACATCAACGAGCTGCCCGAGA...GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp GAAGGGAGAGACAGATCCAGGCTGGCCTCCAAGCTCGACTTTCTGAGGGGCCCAGCGGACGACAGGAGCTaGACGCACAGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: EGRDRSRLASKLDFLRGPADDRS*THSWYL
Trigger: CAAGTACCAGCTGTGCGTTCAGCTCCTGTCGTCCGC...TGGGCCCCTCAGAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTCTCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp CCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCGCGGACGACAGGAGCTaGACGCACAGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: PAPSGQLQACQLSCLSLLADDRS*THSWYL
Trigger: CAAGTACCAGCTGTGCGTTCAGCTCCTGTCGTCCGC...GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp GAAGGGAGAGACAGATCCAGGCTGGCCTCCAAGCTCGACTTTCTGAGGGGCCCACCAAGCTCGACTTTCTaGGGGGCCCAGGGGAACATG +
Preference number: 4 (lower is better)
Translates to: EGRDRSRLASKLDFLRGPPSSTF*GAQGNM
Trigger: CATGTTCCCCTGGGCCCCTCAGAAAGTCGAGCTTGG...TGGGCCCCTCAGAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTCTCCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp GTCTCAGCTACTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGAATACCCTTCGGCCTTaGGGTCCACCACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: VSATPEAEAGEWREPGRQNTLRP*GPPPGT
Trigger: AGTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATT...CTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAGTAGCTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp GCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAATGGACGGCTGCCAGGTaGGATACCTGCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: APSLKGAHAGFPGHHSGQWTAAR*DTCSSL
Trigger: CAGTGAGCTGCAGGTATCTCACCTGGCAGCCGTCCA...TTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp GAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGGCCCATCCTCAGAACATaGTGGGAGGAGGAGGCTAAT +
Preference number: 4 (lower is better)
Translates to: ECSPSQRGPGLDLGGGQGPILRT*WEEEAN
Trigger: ATTAGCCTCCTCCTCCCATCATGTTCTGAGGATGGG...CCCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376770.5
CDS-3UTR GCA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCATTGGCATCGCTCTTCTaGTGGATGGTCGCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: TSSEQAGRARDWEQQTGALASLF*WMVAGS
Trigger: AGACCCGGCGACCATCCAGCAGAAGAGCGATGCCAA...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp GAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGGCACCATCAGGGCAGCTaGAAGCTTGCCAGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: ECSPSQRGPGLDLGGGQGHHQGS*KLASCL
Trigger: AAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTG...CCCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp ATGCTGCACCTCCCACATCTCAGGTGCTCCGTCTCTGAAAGGGGCACACGCAGGTCACCTCCCTGCACCTaGACCATCAGGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: MLHLPHLRCSVSERGTRRSPPCT*TIRAAA
Trigger: TGCAGCTGCCCTGATGGTGCAGGTGCAGGGAGGTGA...CCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAGGTGCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp CAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGCTGTCAGAGCAGGTGAGGACATGATCTCCTaGCTGCGCTCGGCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: QTPYHTHPGLMCPAVRAGEDMIS*LRSAAA
Trigger: CGCGGCGGCCGAGCGCAGGCAGGAGATCATGTCCTC...ACCTGCTCTGACAGCTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376770.5
CDS-3UTR CCA 90 bp GAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGGGGGAATTCCTTCCTCTaGTCTCGAGAGAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: ECSPSQRGPGLDLGGGQGGNSFL*SRERSS
Trigger: GGAGGATCTCTCTCGAGACCAGAGGAAGGAATTCCC...CCCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCCGCACAGCTGGTACTTaGACCCGCAATCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HLHHQGSCKLASCLACPCRTAGT*TRNLAW
Trigger: CCAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCG...GCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ATCTGCAGGTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACGTCGCCGGGTCTGGCTaGAAGGTCCCCAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: ICRSRQDHLKSAFPSRNHVAGSG*KVPRGA
Trigger: CGCGCCTCTGGGGACCTTCCAGCCAGACCCGGCGAC...GTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGACCTGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp CCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCTCAGGGTTCAGCAGATaGGGGCTCAGGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: PAPSGQLQACQLSCLSLLSGFSR*GLRGCQ
Trigger: CTGACACCCCCTGAGCCCCCATCTGCTGAACCCTGA...GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCTCAGGGTTCAGCAGATaGGGGCTCAGGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VEGEGEATTFFTWRQEGASGFSR*GLRGCQ
Trigger: CTGACACCCCCTGAGCCCCCATCTGCTGAACCCTGA...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CCA 90 bp CCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCAAGGGTTAGAGGTCTaGGGACACCTGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PAPSGQLQACQLSCLSLLQGLEV*GHLAST
Trigger: GGTGGAGGCCAGGTGTCCCCAGACCTCTAACCCTTG...GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ATGCTGCACCTCCCACATCTCAGGTGCTCCGTCTCTGAAAGGGGCACACGCAGGGGTGGGGTGGGGGCTTaGAATGCTCTCCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: MLHLPHLRCSVSERGTRRGGVGA*NALQAR
Trigger: TCTGGCTTGGAGAGCATTCCAAGCCCCCACCCCACC...CCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAGGTGCAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCACCAAGGGTGGTTGGCTaGGAGACAGAGGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: TSSEQAGRARDWEQQTGAPRVVG*ETEVLG
Trigger: TCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGG...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGAGCTTGGGAGGTCGAGGTGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ATPEAEAGEWREPGRQSLGGRGG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCACCTCGACCTCC...CAAGCTCTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGGTAATCTCAGCACTTTaGGAGGTCGAGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GLGMLSKPEGAGPGFGRWVISAL*EVEVGG
Trigger: TCCACCCACCTCGACCTCCCAAAGTGCTGAGATTAC...CCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp AACCTAACCCCACCTGGTACCCATCTAGCTTCTGGGGCTCCACTGACAGTGAGGCAGGTGCTCCGTCTCTaGAAGGGGCACACGCAGGCT +
Preference number: 4 (lower is better)
Translates to: NLTPPGTHLASGAPLTVRQVLRL*KGHTQA
Trigger: AGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTG...CCTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp AGAGCACGGCCCATGAGCCCACCCTCCACTTCCCAGATTGGTCAGAGTTACATGCAGGTGCTCCGTCTCTaGAAGGGGCACACGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RARPMSPPSTSQIGQSYMQVLRL*KGHTQA
Trigger: AGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTG...CATGTAACTCTGACCAATCTGGGAAGTGGAGGGTGGGCTCATGGGCCGTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp CTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGATCTCAGTCCCGGCCTaGGCCTCTGGGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LACPCSEGQRTQVEWSQEISVPA*ASGPKP
Trigger: TGGCTTTGGCCCAGAGGCTCAGGCCGGGACTGAGAT...CTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp CAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATCTCAGTCCCGGCCTaGGCCTCTGGGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QDKRQVPRVVGWETEVLGISVPA*ASGPKP
Trigger: TGGCTTTGGCCCAGAGGCTCAGGCCGGGACTGAGAT...TCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp GTCCAGCTGTCAGAGCAGGTCCCAATCCTGCTCCCCATCTACCCTGGGACATCCAGGCAGAGCTTGCAGTaGGCTGAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: VQLSEQVPILLPIYPGTSRQSLQ*AEIAPL
Trigger: CAGTGGCGCAATCTCAGCTCACTGCAAGCTCTGCCT...GGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp ATGCTGCACCTCCCACATCTCAGGTGCTCCGTCTCTGAAAGGGGCACACGCAGGCCCAGGGGAACATGCTaGACCTCCCACATCTCAGGT +
Preference number: 4 (lower is better)
Translates to: MLHLPHLRCSVSERGTRRPRGTC*TSHISG
Trigger: ACCTGAGATGTGGGAGGTGCAGCATGTTCCCCTGGG...CCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAGGTGCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp GCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGGGGGGGCAGCTGCAAGCTTaGCAGTTGTCTTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ACPCSEGQRTQVEWSQEGGQLQA*QLSCLS
Trigger: GGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCC...CCCCTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp ACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTTCACCTCCCTGCACCTaGACCATCAGGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TCTIRAAASLPVVLPVPASPPCT*TIRAAA
Trigger: TGCAGCTGCCCTGATGGTGCAGGTGCAGGGAGGTGA...AGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp GTCCAGCTGTCAGAGCAGGTCCCAATCCTGCTCCCCATCTACCCTGGGACATCCACATGGTCACCTCCCTaGACCTGCACCATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VQLSEQVPILLPIYPGTSTWSPP*TCTIRA
Trigger: TGCCCTGATGGTGCAGGTGCAGGGAGGTGACCATGT...GGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp CAGCTCACTGAGGGGTCTGCCCATGAACCTGTTTCTGTGATGGCCTGGTTCCTGGGTGGGGGCTTGGAATaGTCTCCAAGCCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QLTEGSAHEPVSVMAWFLGGGLE*SPSQRG
Trigger: CCCCCTCTGGCTTGGAGAGCATTCCAAGCCCCCACC...CAGGAACCAGGCCATCACAGAAACAGGTTCATGGGCAGACCCCTCAGTGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp GGATTTGGGAGGTGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGTTGGGCCGCCCAAGCTaGACCGCCTGGACCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GFGRWTGDSSNPLPYSSRLGRPS*TAWTCA
Trigger: AGCGCAGGTCCAGGCGGTGCAGCTTGGGCGGCCCAA...CCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCCAAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCGCAATCTGGCCTGGCTaGGAACCAGTCCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: VEGEGEATTFFTWRQEGAAIWPG*EPVLDL
Trigger: GAGGTCAAGGACTGGTTCGCAGCCAGGCCAGATTGC...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR GCA 90 bp GCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGCAGTACTGGACGGCTaGCAGGTGAGATACCTGCAG +
Preference number: 4 (lower is better)
Translates to: APSLKGAHAGFPGHHSGQAVLDG*QVRYLQ
Trigger: CTGCAGGTATCTCACCTGGCAGCCGTCCAGTACTGC...TTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp CAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGCTGTCAGAGCAGGTACCCCAGGCCTCCGGTaGCGTCACCATCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QTPYHTHPGLMCPAVRAGTPGLR*RHHPLS
Trigger: GGAGAGAGGATGGTGACGGCACCGGAGGCCTGGGGT...ACCTGCTCTGACAGCTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376770.5
CDS-3UTR CCA 90 bp TGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGCACAGCCATGGCTTGTaGCTTCTGGACACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: CTIRAAASLPVVLPVPAPHSHGL*LLDTLL
Trigger: CAGGAGGGTGTCCAGAAGCCACAAGCCATGGCTGTG...CGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GAAGGGAGAGACAGATCCAGGCTGGCCTCCAAGCTCGACTTTCTGAGGGGCCCAACCCGCAATCTGGCCTaGCTGCGAACCTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: EGRDRSRLASKLDFLRGPTRNLA*LRTWSL
Trigger: CAATGACCAGGTTCGCAGCCAGGCCAGATTGCGGGT...TGGGCCCCTCAGAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTCTCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251546.8
ENST00000376762.8
CDS-3UTR CCA 90 bp GTCCAGCTGTCAGAGCAGGTCCCAATCCTGCTCCCCATCTACCCTGGGACATCCACCCGCAATCTGGCCTaGCTGCGAACCTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: VQLSEQVPILLPIYPGTSTRNLA*LRTWSL
Trigger: CAATGACCAGGTTCGCAGCCAGGCCAGATTGCGGGT...GGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251546.8
ENST00000376762.8
CDS-3UTR CCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGATGGTCGCCGGGTCTaGCTGGAAGGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQDGRRV*LEGPQR
Trigger: CCTCTGGGGACCTTCCAGCCAGACCCGGCGACCATC...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CCA 90 bp AGACAGGGGCAGAGCACGGCCCATGAGCCCACCCTCCACTTCCCAGATTGGTCAAGACCTCCCTCCACTTaGCATCGCTCTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RQGQSTAHEPTLHFPDWSRPPST*HRSSAG
Trigger: TCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCT...TGACCAATCTGGGAAGTGGAGGGTGGGCTCATGGGCCGTGCTCTGCCCCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCGCCGGGCGGGTAGTTaGAGAATGTGTGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: TCTIRAAASLPVVLPVPARRAGS*RMCGRP
Trigger: AGGTCTCCCACACATTCTCCAACTACCCGCCCGGCG...AGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGACCTTTCGCAAGGGTTAGAGGTCTaGGGACACCTGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LKGAHAGFPGHHSGQDLSQGLEV*GHLAST
Trigger: GGTGGAGGCCAGGTGTCCCCAGACCTCTAACCCTTG...CGAAAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCAGAGACAGATCCAGGCTaGCCTCCAAGCTCGACTTTC +
Preference number: 4 (lower is better)
Translates to: TSSEQAGRARDWEQQTGAETDPG*PPSSTF
Trigger: GAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTC...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCAATTCCCTCAGTCCTCTaGGAACCTAACCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: TSSEQAGRARDWEQQTGAIPSVL*EPNPTW
Trigger: CCAGGTGGGGTTAGGTTCCCAGAGGACTGAGGGAAT...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GGGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGCCTGGATTTGGGAGGTaGACAGGGGATTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GAWNALQARGGRAWIWEVPGFGR*TGDSSN
Trigger: GTTTGAAGAATCCCCTGTCCACCTCCCAAATCCAGG...CACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGCTGTCAGAGCAGGTAGAGGGGGCCGGGCCTaGATTTGGGAGGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: QTPYHTHPGLMCPAVRAGRGGRA*IWEVDR
Trigger: CCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCT...ACCTGCTCTGACAGCTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GAAGGGAGAGACAGATCCAGGCTGGCCTCCAAGCTCGACTTTCTGAGGGGCCCACCAAGGGTGGTTGGCTaGGAGACAGAGGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: EGRDRSRLASKLDFLRGPPRVVG*ETEVLG
Trigger: TCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGG...TGGGCCCCTCAGAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTCTCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp AACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGGTCTCTCGCGGCACGATCCGTTaGGCCGCCCAAGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: NSMGENRSHNPITSHQVSRGTIR*AAQAAP
Trigger: CGGTGCAGCTTGGGCGGCCCAACGGATCGTGCCGCG...AGAGACCTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACAGGGCACAACCCCAGCCTGTGGCTaGGCCTCCAGAGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VQAGPPKVCLSFQKPQGTTPACG*ASRGSQ
Trigger: CTGGCTTCCTCTGGAGGCCCAGCCACAGGCTGGGGT...TGTGCCCTGTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCGGAGGTCGAGGTGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VEGEGEATTFFTWRQEGAGGRGG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCACCTCGACCTCC...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR CCA 90 bp ATGCTGCACCTCCCACATCTCAGGTGCTCCGTCTCTGAAAGGGGCACACGCAGGTTTGGGAGGTCGAGGTaGGTGGATCACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: MLHLPHLRCSVSERGTRRFGRSR*VDHEVR
Trigger: CCTGACCTCGTGATCCACCCACCTCGACCTCCCAAA...CCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAGGTGCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp AGCCTGGGTGGCACTGCTGATCTGGCACAAGGTGGACTCAAGAGCTGCCCAGAGTTTGGGAGGTCGAGGTaGGTGGATCACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SLGGTADLAQGGLKSCPEFGRSR*VDHEVR
Trigger: CCTGACCTCGTGATCCACCCACCTCGACCTCCCAAA...CTCTGGGCAGCTCTTGAGTCCACCTTGTGCCAGATCAGCAGTGCCACCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
3UTR CAA 72 bp GCACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTaGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: APAPSGQLQACQ*SCLSLLRGSKN
Trigger: GTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp CAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACTCTCGGGCAGCTCGTTaGTGTTCCCCACAGCCATGG +
Preference number: 4 (lower is better)
Translates to: QLQACQLSCLSLLRGSKNSRAAR*CSPQPW
Trigger: CCATGGCTGTGGGGAACATCAACGAGCTGCCCGAGA...GTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp AACCTAACCCCACCTGGTACCCATCTAGCTTCTGGGGCTCCACTGACAGTGAGGCCAAGCTCGACTTTCTaGGGGGCCCAGGGGAACATG +
Preference number: 4 (lower is better)
Translates to: NLTPPGTHLASGAPLTVRPSSTF*GAQGNM
Trigger: CATGTTCCCCTGGGCCCCTCAGAAAGTCGAGCTTGG...CCTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp CAGCTCACTGAGGGGTCTGCCCATGAACCTGTTTCTGTGATGGCCTGGTTCCTGCCAAGCTCGACTTTCTaGGGGGCCCAGGGGAACATG +
Preference number: 4 (lower is better)
Translates to: QLTEGSAHEPVSVMAWFLPSSTF*GAQGNM
Trigger: CATGTTCCCCTGGGCCCCTCAGAAAGTCGAGCTTGG...CAGGAACCAGGCCATCACAGAAACAGGTTCATGGGCAGACCCCTCAGTGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp CAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACCAAAGCCACCTCTTCTaGGCAGGCAGGCAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: QLQACQLSCLSLLRGSKNQSHLF*AGRQSE
Trigger: CTCGCTCTGCCTGCCTGCTCAGAAGAGGTGGCTTTG...GTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp GGGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGATTACCATTCAAGATaGGATGTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: GAWNALQARGGRAWIWEVDYHSR*DVGGDT
Trigger: TGTGTCCCCACCCACATCTCATCTTGAATGGTAATC...CACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCCATGGTGGTGGAAGGTaGAGGGGAAGCAACGACCTT +
Preference number: 4 (lower is better)
Translates to: VEGEGEATTFFTWRQEGAHGGGR*RGSNDL
Trigger: AAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATG...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR TCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCACGAGGTCAGGAGATTaGGACCACCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: VEGEGEATTFFTWRQEGATRSGD*DHPGQH
Trigger: ATGTTGGCCAGGGTGGTCTCAATCTCCTGACCTCGT...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR GCA 90 bp CTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGACCTTTCGGCAATCTGGCCTGGCTaGGAACCTGGTCATTGGGGA +
Preference number: 4 (lower is better)
Translates to: LKGAHAGFPGHHSGQDLSAIWPG*EPGHWG
Trigger: TCCCCAATGACCAGGTTCGCAGCCAGGCCAGATTGC...CGAAAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251546.8
ENST00000376762.8
CDS-3UTR GCA 90 bp CTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGACCTTTCGCCCAGGGGAACATGCTaGACCTCCCACATCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LKGAHAGFPGHHSGQDLSPRGTC*TSHISG
Trigger: ACCTGAGATGTGGGAGGTGCAGCATGTTCCCCTGGG...CGAAAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCATGTCTTGCCTGTCCCTaGTCCGAGGGTCAAAGAACA +
Preference number: 4 (lower is better)
Translates to: TSSEQAGRARDWEQQTGACLACP*SEGQRT
Trigger: TGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACA...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp CAGCTCACTGAGGGGTCTGCCCATGAACCTGTTTCTGTGATGGCCTGGTTCCTGGCTTGCCAGTTGTCTTaGCTGTCCCTGCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: QLTEGSAHEPVSVMAWFLACQLS*LSLLRG
Trigger: CCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGC...CAGGAACCAGGCCATCACAGAAACAGGTTCATGGGCAGACCCCTCAGTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp GGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGCTTAGACAGAAGCCATaGCATTGTACCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLGMLSKPEGAGPGFGRWLRQKP*HCTICR
Trigger: CCTGCAGATGGTACAATGGCATGGCTTCTGTCTAAG...CCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp CTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGACCTTTCGCACAGCCATGGCTTGTaGCTTCTGGACACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LKGAHAGFPGHHSGQDLSHSHGL*LLDTLL
Trigger: CAGGAGGGTGTCCAGAAGCCACAAGCCATGGCTGTG...CGAAAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGGGGTGTTCCCCACAGCCATaGCTTGTGGCTTCTGGACAC +
Preference number: 4 (lower is better)
Translates to: ACPCSEGQRTQVEWSQEGCSPQP*LVASGH
Trigger: GTGTCCAGAAGCCACAAGCCATGGCTGTGGGGAACA...CCCCTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGAGCTTGGGGAATTCCTTCCTCTaGTCTCGAGAGAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: ATPEAEAGEWREPGRQSLGNSFL*SRERSS
Trigger: GGAGGATCTCTCTCGAGACCAGAGGAAGGAATTCCC...CAAGCTCTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCGCCTGGCTGCGAACCTaGTCATTGGGGAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: VEGEGEATTFFTWRQEGAAWLRT*SLGNSF
Trigger: GAAGGAATTCCCCAATGACCAGGTTCGCAGCCAGGC...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475435.5
CDS-3UTR CCA 90 bp CAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGACTTGGACCCGCAATCTaGCCTGGCTGCGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: QDKRQVPRVVGWETEVLGLGPAI*PGCEPG
Trigger: ACCAGGTTCGCAGCCAGGCCAGATTGCGGGTCCAAG...TCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251546.8
ENST00000376762.8
CDS-3UTR CCA 90 bp CCATTGTACCATCTGCAGGTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCGATGGTCGCCGGGTCTaGCTGGAAGGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PLYHLQVQAGPPKVCLSFDGRRV*LEGPQR
Trigger: CCTCTGGGGACCTTCCAGCCAGACCCGGCGACCATC...GAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGACCTGCAGATGGTACAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp CAGGAGGGAGCCGGGGAAACCGTCACTTGTAAAACCATCAGATCTCGTGAGAACGATGGTCGCCGGGTCTaGCTGGAAGGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: QEGAGETVTCKTIRSRENDGRRV*LEGPQR
Trigger: CCTCTGGGGACCTTCCAGCCAGACCCGGCGACCATC...GTTCTCACGAGATCTGATGGTTTTACAAGTGACGGTTTCCCCGGCTCCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGCGCTCTTCTGCTGGATaGTCGCCGGGTCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWRSSAG*SPGLAG
Trigger: TCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCG...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGCTGTCAGAGCAGGTCGCTCTTCTGCTGGATaGTCGCCGGGTCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QTPYHTHPGLMCPAVRAGRSSAG*SPGLAG
Trigger: TCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCG...ACCTGCTCTGACAGCTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGCATCGCTCTTCTGCTaGATGGTCGCCGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQASLFC*MVAGSG
Trigger: GCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGC...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CCA 90 bp AACCTAACCCCACCTGGTACCCATCTAGCTTCTGGGGCTCCACTGACAGTGAGGCGCCGGGCGGGTAGTTaGAGAATGTGTGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: NLTPPGTHLASGAPLTVRRRAGS*RMCGRP
Trigger: AGGTCTCCCACACATTCTCCAACTACCCGCCCGGCG...CCTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACTCAGGGTTCAGCAGATaGGGGCTCAGGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: QLQACQLSCLSLLRGSKNSGFSR*GLRGCQ
Trigger: CTGACACCCCCTGAGCCCCCATCTGCTGAACCCTGA...GTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp AGAGCACGGCCCATGAGCCCACCCTCCACTTCCCAGATTGGTCAGAGTTACATGTCAGGGTTCAGCAGATaGGGGCTCAGGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RARPMSPPSTSQIGQSYMSGFSR*GLRGCQ
Trigger: CTGACACCCCCTGAGCCCCCATCTGCTGAACCCTGA...CATGTAACTCTGACCAATCTGGGAAGTGGAGGGTGGGCTCATGGGCCGTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GGATTTGGGAGGTGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGCCTTTCGGGGAGAGCTaGCCCGACCCCAGCATGCGA +
Preference number: 4 (lower is better)
Translates to: GFGRWTGDSSNPLPYSSRPFGES*PDPSMR
Trigger: TCGCATGCTGGGGTCGGGCCAGCTCTCCCCGAAAGG...CCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCCAAATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGGGGGAGACAGATCCAGGCTaGCCTCCAAGCTCGACTTTC +
Preference number: 4 (lower is better)
Translates to: ACPCSEGQRTQVEWSQEGETDPG*PPSSTF
Trigger: GAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTC...CCCCTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GTCTCAGCTACTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGTTGGTCAGAGTTACATaGTCACCTCCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: VSATPEAEAGEWREPGRQLVRVT*SPPCTC
Trigger: GCAGGTGCAGGGAGGTGACCATGTAACTCTGACCAA...CTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAGTAGCTGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGCTCCACTTCCCAGATTaGTCAGAGTTACATGGTCAC +
Preference number: 4 (lower is better)
Translates to: GLGMLSKPEGAGPGFGRWLHFPD*SELHGH
Trigger: GTGACCATGTAACTCTGACCAATCTGGGAAGTGGAG...CCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGGCAGAGCGAGAGACTaGGAGCAGCAGACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQGRARD*EQQTGA
Trigger: TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCC...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GGTGCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTTACCCATCTAGCTTCTaGGGCTCCACTGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: GAPSLKGAHAGFPGHHSGYPSSF*GSTDSE
Trigger: CTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTA...ACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp AGACAGGGGCAGAGCACGGCCCATGAGCCCACCCTCCACTTCCCAGATTGGTCATACCCATCTAGCTTCTaGGGCTCCACTGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: RQGQSTAHEPTLHFPDWSYPSSF*GSTDSE
Trigger: CTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTA...TGACCAATCTGGGAAGTGGAGGGTGGGCTCATGGGCCGTGCTCTGCCCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp TGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGATTCCCTCAGTCCTCTaGGAACCTAACCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: CTIRAAASLPVVLPVPAPIPSVL*EPNPTW
Trigger: CCAGGTGGGGTTAGGTTCCCAGAGGACTGAGGGAAT...CGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGAGCTTGGCTCCCCATCTACCCTaGGACATCCTGTACAGGATT +
Preference number: 4 (lower is better)
Translates to: ATPEAEAGEWREPGRQSLAPHLP*DILYRI
Trigger: AATCCTGTACAGGATGTCCCAGGGTAGATGGGGAGC...CAAGCTCTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGAGAGGGGGCCGGGCCTaGATTTGGGAGGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: DRGFFKPPTILIQGSCVQRGGRA*IWEVDR
Trigger: CCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCT...CTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CTGCCCACACTGAGAGGCTCCACAAAGAAGAGGCTGCTAGGGGCAAGGGTTAGAGGTGGGGTGGGGGCTTaGAATGCTCTCCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LPTLRGSTKKRLLGARVRGGVGA*NALQAR
Trigger: TCTGGCTTGGAGAGCATTCCAAGCCCCCACCCCACC...TCTAACCCTTGCCCCTAGCAGCCTCTTCTTTGTGGAGCCTCTCAGTGTGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCAAGTTCCAAGGGTGGTTaGCTGGGAGACAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: TSSEQAGRARDWEQQTGASSKGG*LGDRGL
Trigger: AAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACT...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GGTGCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTAGTTCCAAGGGTGGTTaGCTGGGAGACAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GAPSLKGAHAGFPGHHSGSSKGG*LGDRGL
Trigger: AAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACT...ACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGACCCCAGCCTGTGGCTaGGCCTCCAGAGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: DRGFFKPPTILIQGSCVQTPACG*ASRGSQ
Trigger: CTGGCTTCCTCTGGAGGCCCAGCCACAGGCTGGGGT...CTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GGTGCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTGTGGCACTGCTGATCTaGCACAAGGTGGACTCAAGA +
Preference number: 4 (lower is better)
Translates to: GAPSLKGAHAGFPGHHSGVALLI*HKVDSR
Trigger: TCTTGAGTCCACCTTGTGCCAGATCAGCAGTGCCAC...ACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGGAGGAACTTACAATCATaGTGGTGGAAGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: ECSPSQRGPGLDLGGGQGRNLQS*WWKVKG
Trigger: CCCCTTCACCTTCCACCACCATGATTGTAAGTTCCT...CCCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGGCGGACGACAGGAGCTaGACGCACAGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWADDRS*THSWYL
Trigger: CAAGTACCAGCTGTGCGTTCAGCTCCTGTCGTCCGC...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp AGACAGGGGCAGAGCACGGCCCATGAGCCCACCCTCCACTTCCCAGATTGGTCAAGCCCAGCCCTTTTCTaGCAGCAGTTGTTTACCAGT +
Preference number: 4 (lower is better)
Translates to: RQGQSTAHEPTLHFPDWSSPALF*QQLFTS
Trigger: ACTGGTAAACAACTGCTGTCAGAAAAGGGCTGGGCT...TGACCAATCTGGGAAGTGGAGGGTGGGCTCATGGGCCGTGCTCTGCCCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp CAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCATCTCAGTCCCGGCCTaGGCCTCTGGGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QLSCLSLLRGSKNTGRMVISVPA*ASGPKP
Trigger: TGGCTTTGGCCCAGAGGCTCAGGCCGGGACTGAGAT...GACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGCCTGGGTGGCACTGCTaGTCTGGCACAAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQPGWHC*SGTRWT
Trigger: AGTCCACCTTGTGCCAGATCAGCAGTGCCACCCAGG...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp CTGCCCACACTGAGAGGCTCCACAAAGAAGAGGCTGCTAGGGGCAAGGGTTAGACTCCCACATCTCAGGTaGTCCGTCTCTGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LPTLRGSTKKRLLGARVRLPHLR*SVSERG
Trigger: GCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAG...TCTAACCCTTGCCCCTAGCAGCCTCTTCTTTGTGGAGCCTCTCAGTGTGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp TCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGACCTTCTCCCACATCTCAGGTaGTCCGTCTCTGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: SLKGAHAGFPGHHSGQDLLPHLR*SVSERG
Trigger: GCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAG...AAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp CAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACCCCAGGGGAACATGCTaGACCTCCCACATCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QLQACQLSCLSLLRGSKNPRGTC*TSHISG
Trigger: ACCTGAGATGTGGGAGGTGCAGCATGTTCCCCTGGG...GTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp GCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGGGGTGTCTTGCCTGTCCCTaGTCCGAGGGTCAAAGAACA +
Preference number: 4 (lower is better)
Translates to: ACPCSEGQRTQVEWSQEGCLACP*SEGQRT
Trigger: TGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACA...CCCCTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp AACCTAACCCCACCTGGTACCCATCTAGCTTCTGGGGCTCCACTGACAGTGAGGGGGCAGCTGCAAGCTTaGCAGTTGTCTTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: NLTPPGTHLASGAPLTVRGQLQA*QLSCLS
Trigger: GGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCC...CCTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp TGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGCACCATCAGGGCAGCTaGAAGCTTGCCAGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: CTIRAAASLPVVLPVPAPHHQGS*KLASCL
Trigger: AAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTG...CGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp TCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGACCTTACATGGTCACCTCCCTaGACCTGCACCATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SLKGAHAGFPGHHSGQDLTWSPP*TCTIRA
Trigger: TGCCCTGATGGTGCAGGTGCAGGGAGGTGACCATGT...AAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp CTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGACATGGTCACCTCCCTaGACCTGCACCATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LACPCSEGQRTQVEWSQETWSPP*TCTIRA
Trigger: TGCCCTGATGGTGCAGGTGCAGGGAGGTGACCATGT...CTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp TTGACTTATAGTTCCATATGGCTGGGGAAGCCTCAAGAAACAATCGCTGGGCGCTTGGGCCGCCCAAGCTaGACCGCCTGGACCTGCGCT +
Preference number: 4 (lower is better)
Translates to: LTYSSIWLGKPQETIAGRLGRPS*TAWTCA
Trigger: AGCGCAGGTCCAGGCGGTGCAGCTTGGGCGGCCCAA...GCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp CAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACGCAATCTGGCCTGGCTaGGAACCAGTCCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: QLQACQLSCLSLLRGSKNAIWPG*EPVLDL
Trigger: GAGGTCAAGGACTGGTTCGCAGCCAGGCCAGATTGC...GTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCATGCGAACCTGGTCATTaGGGAATTCCTTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TSSEQAGRARDWEQQTGACEPGH*GIPSSG
Trigger: ACCAGAGGAAGGAATTCCCCAATGACCAGGTTCGCA...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251546.8
ENST00000376762.8
CDS-3UTR CCA 90 bp CAGGAGGGAGCCGGGGAAACCGTCACTTGTAAAACCATCAGATCTCGTGAGAACCGCTCTTCTGCTGGATaGTCGCCGGGTCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QEGAGETVTCKTIRSRENRSSAG*SPGLAG
Trigger: TCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCG...GTTCTCACGAGATCTGATGGTTTTACAAGTGACGGTTTCCCCGGCTCCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp CTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGACCTTTCGAGACCTCCCTCCACTTaGCATCGCTCTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LKGAHAGFPGHHSGQDLSRPPST*HRSSAG
Trigger: TCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCT...CGAAAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGCGCCGGGCGGGTAGTTaGAGAATGTGTGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQRRAGS*RMCGRP
Trigger: AGGTCTCCCACACATTCTCCAACTACCCGCCCGGCG...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CCA 90 bp CAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGCTGTCAGAGCAGGTCAAGGGTTAGAGGTCTaGGGACACCTGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: QTPYHTHPGLMCPAVRAGQGLEV*GHLAST
Trigger: GGTGGAGGCCAGGTGTCCCCAGACCTCTAACCCTTG...ACCTGCTCTGACAGCTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGCCTTTCGGGGAGAGCTaGCCCGACCCCAGCATGCGA +
Preference number: 4 (lower is better)
Translates to: HENSMGENRSHNPITSHQPFGES*PDPSMR
Trigger: TCGCATGCTGGGGTCGGGCCAGCTCTCCCCGAAAGG...CTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp CATCTACCCTGGGACATCCTGTACAGGATTCCCTCAGTCCTCTGGGAACCTAACCCCGGCCTGAGCCTCTaGGCCAAAGCCACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HLPWDILYRIPSVLWEPNPGLSL*AKATSS
Trigger: AGAAGAGGTGGCTTTGGCCCAGAGGCTCAGGCCGGG...GTTAGGTTCCCAGAGGACTGAGGGAATCCTGTACAGGATGTCCCAGGGTAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGCCCGGCCTGAGCCTCTaGGCCAAAGCCACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DRGFFKPPTILIQGSCVQPGLSL*AKATSS
Trigger: AGAAGAGGTGGCTTTGGCCCAGAGGCTCAGGCCGGG...CTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGCTCCCCATCTACCCTaGGACATCCTGTACAGGATT +
Preference number: 4 (lower is better)
Translates to: APSLKGAHAGFPGHHSGQAPHLP*DILYRI
Trigger: AATCCTGTACAGGATGTCCCAGGGTAGATGGGGAGC...TTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGGGGGCTCCCCATCTACCCTaGGACATCCTGTACAGGATT +
Preference number: 4 (lower is better)
Translates to: ACPCSEGQRTQVEWSQEGAPHLP*DILYRI
Trigger: AATCCTGTACAGGATGTCCCAGGGTAGATGGGGAGC...CCCCTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGCCTGGATTTGGGAGGTaGACAGGGGATTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: PSGQLQACQLSCLSLLRGPGFGR*TGDSSN
Trigger: GTTTGAAGAATCCCCTGTCCACCTCCCAAATCCAGG...CCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACCCAAGGGTGGTTGGCTaGGAGACAGAGGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: QLQACQLSCLSLLRGSKNPRVVG*ETEVLG
Trigger: TCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGG...GTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp TCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGACCTTCCAAGGGTGGTTGGCTaGGAGACAGAGGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SLKGAHAGFPGHHSGQDLPRVVG*ETEVLG
Trigger: TCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGG...AAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCAGGCACACCTTTTATTTaGCTGCATGCAGTAGGGCGA +
Preference number: 4 (lower is better)
Translates to: TSSEQAGRARDWEQQTGAGTPFI*LHAVGR
Trigger: TCGCCCTACTGCATGCAGCCAAATAAAAGGTGTGCC...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGCTTGGACCCGCAATCTaGCCTGGCTGCGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQLGPAI*PGCEPV
Trigger: GACTGGTTCGCAGCCAGGCCAGATTGCGGGTCCAAG...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR CCA 90 bp GCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGTAATCTCAGCACTTTaGGAGGTCGAGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: APSLKGAHAGFPGHHSGQVISAL*EVEVGG
Trigger: TCCACCCACCTCGACCTCCCAAAGTGCTGAGATTAC...TTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCGTAATCTCAGCACTTTaGGAGGTCGAGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VEGEGEATTFFTWRQEGAVISAL*EVEVGG
Trigger: TCCACCCACCTCGACCTCCCAAAGTGCTGAGATTAC...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
3UTR CAA 72 bp TGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTaGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGG +
Preference number: 4 (lower is better)
Translates to: CTIRAAASLPVV*PVPAPRVKEHR
Trigger: CCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp CCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCAGCCCAGCCCTTTTCTaGCAGCAGTTGTTTACCAGT +
Preference number: 4 (lower is better)
Translates to: PAPSGQLQACQLSCLSLLSPALF*QQLFTS
Trigger: ACTGGTAAACAACTGCTGTCAGAAAAGGGCTGGGCT...GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp TGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCCCAAGCTCGACTTTCTaGGGGGCCCAGGGGAACATG +
Preference number: 4 (lower is better)
Translates to: WTGDSSNPLPYSSRAHVSPSSTF*GAQGNM
Trigger: CATGTTCCCCTGGGCCCCTCAGAAAGTCGAGCTTGG...GGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp CAGGAGGGAGCCGGGGAAACCGTCACTTGTAAAACCATCAGATCTCGTGAGAACTGGACGGCTGCCAGGTaGGATACCTGCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QEGAGETVTCKTIRSRENWTAAR*DTCSSL
Trigger: CAGTGAGCTGCAGGTATCTCACCTGGCAGCCGTCCA...GTTCTCACGAGATCTGATGGTTTTACAAGTGACGGTTTCCCCGGCTCCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp GTCTCAGCTACTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGGATTACCATTCAAGATaGGATGTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: VSATPEAEAGEWREPGRQDYHSR*DVGGDT
Trigger: TGTGTCCCCACCCACATCTCATCTTGAATGGTAATC...CTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAGTAGCTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR TCA 90 bp CTGCCCACACTGAGAGGCTCCACAAAGAAGAGGCTGCTAGGGGCAAGGGTTAGACATGGTGGTGGAAGGTaGAGGGGAAGCAACGACCTT +
Preference number: 4 (lower is better)
Translates to: LPTLRGSTKKRLLGARVRHGGGR*RGSNDL
Trigger: AAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATG...TCTAACCCTTGCCCCTAGCAGCCTCTTCTTTGTGGAGCCTCTCAGTGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp CAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAACGAGGTCAGGAGATTaGGACCACCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: QDKRQVPRVVGWETEVLGTRSGD*DHPGQH
Trigger: ATGTTGGCCAGGGTGGTCTCAATCTCCTGACCTCGT...TCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGAGATCTCAGAGGACATaGTCTCCTGCCTGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQRSQRT*SPACAR
Trigger: CCGAGCGCAGGCAGGAGATCATGTCCTCTGAGATCT...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376770.5
CDS-3UTR GCA 90 bp CTGCTATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGGCAATCTGGCCTGGCTaGGAACCTGGTCATTGGGGA +
Preference number: 4 (lower is better)
Translates to: LLSFQQDKRQVPRVVGWEAIWPG*EPGHWG
Trigger: TCCCCAATGACCAGGTTCGCAGCCAGGCCAGATTGC...CTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251546.8
ENST00000376762.8
CDS-3UTR GCA 90 bp TGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCGCTTGCCAGTTGTCTTaGCTGTCCCTGCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: WTGDSSNPLPYSSRAHVSACQLS*LSLLRG
Trigger: CCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGC...GGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp GGGAGGTGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGGGCAGCTGCAAGCTTaGCAGTTGTCTTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GRWTGDSSNPLPYSSRAHGQLQA*QLSCLS
Trigger: GGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCC...ATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp GACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGTCACCTCCCTGCACCTaGACCATCAGGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DRGFFKPPTILIQGSCVQSPPCT*TIRAAA
Trigger: TGCAGCTGCCCTGATGGTGCAGGTGCAGGGAGGTGA...CTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp CAGCTCACTGAGGGGTCTGCCCATGAACCTGTTTCTGTGATGGCCTGGTTCCTGTGCCATTGTACCATCTaGAGGTCCAGGCAGGACCAC +
Preference number: 4 (lower is better)
Translates to: QLTEGSAHEPVSVMAWFLCHCTI*RSRQDH
Trigger: GTGGTCCTGCCTGGACCTGCAGATGGTACAATGGCA...CAGGAACCAGGCCATCACAGAAACAGGTTCATGGGCAGACCCCTCAGTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp CTGCCCACACTGAGAGGCTCCACAAAGAAGAGGCTGCTAGGGGCAAGGGTTAGATGCCATTGTACCATCTaGAGGTCCAGGCAGGACCAC +
Preference number: 4 (lower is better)
Translates to: LPTLRGSTKKRLLGARVRCHCTI*RSRQDH
Trigger: GTGGTCCTGCCTGGACCTGCAGATGGTACAATGGCA...TCTAACCCTTGCCCCTAGCAGCCTCTTCTTTGTGGAGCCTCTCAGTGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp ATGCTGCACCTCCCACATCTCAGGTGCTCCGTCTCTGAAAGGGGCACACGCAGGGCCTGGTTCCTGAAATaGCAACCCCTCTGTACCTTA +
Preference number: 4 (lower is better)
Translates to: MLHLPHLRCSVSERGTRRAWFLK*QPLCTL
Trigger: TAAGGTACAGAGGGGTTGGCATTTCAGGAACCAGGC...CCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAGGTGCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp AACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGGTCTCTTGCACCGCCTGGACCTaGGCTTGCCTGGAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: NSMGENRSHNPITSHQVSCTAWT*ACLESE
Trigger: CTCGCTTTCCAGGCAAGCGCAGGTCCAGGCGGTGCA...AGAGACCTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376770.5
CDS-3UTR CCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGCACAGCCATGGCTTGTaGCTTCTGGACACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQHSHGL*LLDTLL
Trigger: CAGGAGGGTGTCCAGAAGCCACAAGCCATGGCTGTG...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp AGAGCACGGCCCATGAGCCCACCCTCCACTTCCCAGATTGGTCAGAGTTACATGTGTTCCCCACAGCCATaGCTTGTGGCTTCTGGACAC +
Preference number: 4 (lower is better)
Translates to: RARPMSPPSTSQIGQSYMCSPQP*LVASGH
Trigger: GTGTCCAGAAGCCACAAGCCATGGCTGTGGGGAACA...CATGTAACTCTGACCAATCTGGGAAGTGGAGGGTGGGCTCATGGGCCGTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGACCTTTCGGGGAATTCCTTCCTCTaGTCTCGAGAGAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: LKGAHAGFPGHHSGQDLSGNSFL*SRERSS
Trigger: GGAGGATCTCTCTCGAGACCAGAGGAAGGAATTCCC...CGAAAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCTGCGAACCTGGTCATTaGGGAATTCCTTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: VEGEGEATTFFTWRQEGACEPGH*GIPSSG
Trigger: ACCAGAGGAAGGAATTCCCCAATGACCAGGTTCGCA...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475435.5
CDS-3UTR CCA 90 bp CTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGGCCTGGCTGCGAACCTaGTCATTGGGGAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: LACPCSEGQRTQVEWSQEAWLRT*SLGNSF
Trigger: GAAGGAATTCCCCAATGACCAGGTTCGCAGCCAGGC...CTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251546.8
ENST00000376762.8
CDS-3UTR CCA 90 bp TATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGCTTGGACCCGCAATCTaGCCTGGCTGCGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: YLSSRTRGKFQGWLAGRQLGPAI*PGCEPG
Trigger: ACCAGGTTCGCAGCCAGGCCAGATTGCGGGTCCAAG...CTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251546.8
ENST00000376762.8
CDS-3UTR CCA 90 bp AACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGGTCTCTCGCTCTTCTGCTGGATaGTCGCCGGGTCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: NSMGENRSHNPITSHQVSRSSAG*SPGLAG
Trigger: TCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCG...AGAGACCTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp GTAGGGCGAAGTCAGGAGAACACTGCTATCTTTCCAGCAGGACAAGAGGCAAGTGCATCGCTCTTCTGCTaGATGGTCGCCGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: VGRSQENTAIFPAGQEASASLFC*MVAGSG
Trigger: GCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGC...ACTTGCCTCTTGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTTCGCCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGACCTTTCGTTGGTCAGAGTTACATaGTCACCTCCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: LKGAHAGFPGHHSGQDLSLVRVT*SPPCTC
Trigger: GCAGGTGCAGGGAGGTGACCATGTAACTCTGACCAA...CGAAAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp AGACAGGGGCAGAGCACGGCCCATGAGCCCACCCTCCACTTCCCAGATTGGTCACTCCACTTCCCAGATTaGTCAGAGTTACATGGTCAC +
Preference number: 4 (lower is better)
Translates to: RQGQSTAHEPTLHFPDWSLHFPD*SELHGH
Trigger: GTGACCATGTAACTCTGACCAATCTGGGAAGTGGAG...TGACCAATCTGGGAAGTGGAGGGTGGGCTCATGGGCCGTGCTCTGCCCCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGGGGCCTGGATTTGGGAGGTaGACAGGGGATTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: ACPCSEGQRTQVEWSQEGPGFGR*TGDSSN
Trigger: GTTTGAAGAATCCCCTGTCCACCTCCCAAATCCAGG...CCCCTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GGATTTGGGAGGTGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGGTGGGGTGGGGGCTTaGAATGCTCTCCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GFGRWTGDSSNPLPYSSRGGVGA*NALQAR
Trigger: TCTGGCTTGGAGAGCATTCCAAGCCCCCACCCCACC...CCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCCAAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ATGCTGCACCTCCCACATCTCAGGTGCTCCGTCTCTGAAAGGGGCACACGCAGGGGCACACCTTTTATTTaGCTGCATGCAGTAGGGCGA +
Preference number: 4 (lower is better)
Translates to: MLHLPHLRCSVSERGTRRGTPFI*LHAVGR
Trigger: TCGCCCTACTGCATGCAGCCAAATAAAAGGTGTGCC...CCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAGGTGCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCGGCACACCTTTTATTTaGCTGCATGCAGTAGGGCGA +
Preference number: 4 (lower is better)
Translates to: PAPSGQLQACQLSCLSLLGTPFI*LHAVGR
Trigger: TCGCCCTACTGCATGCAGCCAAATAAAAGGTGTGCC...GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp AACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGGTCTCTCCAAGCTGCACCGCCTaGACCTGCGCTTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: NSMGENRSHNPITSHQVSPSCTA*TCACLE
Trigger: TTCCAGGCAAGCGCAGGTCCAGGCGGTGCAGCTTGG...AGAGACCTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp CAGGAGGGAGCCGGGGAAACCGTCACTTGTAAAACCATCAGATCTCGTGAGAACCTTGGACCCGCAATCTaGCCTGGCTGCGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: QEGAGETVTCKTIRSRENLGPAI*PGCEPV
Trigger: GACTGGTTCGCAGCCAGGCCAGATTGCGGGTCCAAG...GTTCTCACGAGATCTGATGGTTTTACAAGTGACGGTTTCCCCGGCTCCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp CATCTACCCTGGGACATCCTGTACAGGATTCCCTCAGTCCTCTGGGAACCTAACCTTGGACCCGCAATCTaGCCTGGCTGCGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: HLPWDILYRIPSVLWEPNLGPAI*PGCEPV
Trigger: GACTGGTTCGCAGCCAGGCCAGATTGCGGGTCCAAG...GTTAGGTTCCCAGAGGACTGAGGGAATCCTGTACAGGATGTCCCAGGGTAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp TGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGGTTTCTGTGATGGCCTaGTTCCTGAAATGCCAACCC +
Preference number: 4 (lower is better)
Translates to: CTIRAAASLPVVLPVPAPVSVMA*FLKCQP
Trigger: GGGTTGGCATTTCAGGAACCAGGCCATCACAGAAAC...CGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACAGGGACTTATAGTTCCATATaGCTGGGGAAGCCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: GMLSKPEGAGPGFGRWTGTYSSI*LGKPQE
Trigger: TTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGT...CCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp CATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGGCGGACGACAGGAGCTaGACGCACAGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: HENSMGENRSHNPITSHQADDRS*THSWYL
Trigger: CAAGTACCAGCTGTGCGTTCAGCTCCTGTCGTCCGC...CTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR TCA 90 bp CCTTCCCAAGCCCAGCCCTTTTCTGACAGCAGTTGTTTACCAGTCAGGGTTCAGAATACCCTTCGGCCTTaGGGTCCACCACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: PSQAQPFSDSSCLPVRVQNTLRP*GPPPGT
Trigger: AGTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATT...CTGAACCCTGACTGGTAAACAACTGCTGTCAGAAAAGGGCTGGGCTTGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGCATGGTGGTGGAAGGTaGAGGGGAAGCAACGACCTT +
Preference number: 4 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWHGGGR*RGSNDL
Trigger: AAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATG...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp GTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACAGGGCACAACGAGGTCAGGAGATTaGGACCACCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: VQAGPPKVCLSFQKPQGTTRSGD*DHPGQH
Trigger: ATGTTGGCCAGGGTGGTCTCAATCTCCTGACCTCGT...TGTGCCCTGTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp CAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACTGTCTTGCCTGTCCCTaGTCCGAGGGTCAAAGAACA +
Preference number: 4 (lower is better)
Translates to: QLQACQLSCLSLLRGSKNCLACP*SEGQRT
Trigger: TGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACA...GTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp AGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACAGGGCACAGGTTGGGCAGCTGCAAGCTTaGCAGTTGTCTTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RQDHLKSAFPSRNHRAQVGQLQA*QLSCLS
Trigger: GGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCC...AACCTGTGCCCTGTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp CAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACCACCATCAGGGCAGCTaGAAGCTTGCCAGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: QLQACQLSCLSLLRGSKNHHQGS*KLASCL
Trigger: AAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTG...GTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp AACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGGTCTCTTCACCTCCCTGCACCTaGACCATCAGGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NSMGENRSHNPITSHQVSSPPCT*TIRAAA
Trigger: TGCAGCTGCCCTGATGGTGCAGGTGCAGGGAGGTGA...AGAGACCTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp TATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGACATGGTCACCTCCCTaGACCTGCACCATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: YLSSRTRGKFQGWLAGRQTWSPP*TCTIRA
Trigger: TGCCCTGATGGTGCAGGTGCAGGGAGGTGACCATGT...CTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp CTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGAGCTTGCAGTAAGTCAGGAGAACACTaGTATCTTTCCAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LQRLRQVNGANLGGRACSKSGEH*YLSSRT
Trigger: TGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTT...ACTGCAAGCTCTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp CAGGAGGGAGCCGGGGAAACCGTCACTTGTAAAACCATCAGATCTCGTGAGAACGCAATCTGGCCTGGCTaGGAACCAGTCCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: QEGAGETVTCKTIRSRENAIWPG*EPVLDL
Trigger: GAGGTCAAGGACTGGTTCGCAGCCAGGCCAGATTGC...GTTCTCACGAGATCTGATGGTTTTACAAGTGACGGTTTCCCCGGCTCCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp GTCCAGCTGTCAGAGCAGGTCCCAATCCTGCTCCCCATCTACCCTGGGACATCCGGACCACCTAAAGTCTaGCTTTCCTTCCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: VQLSEQVPILLPIYPGTSGPPKV*LSFQKP
Trigger: TGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCC...GGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGGCCTGGCTGCGAACCTaGTCATTGGGGAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWAWLRT*SLGNSF
Trigger: GAAGGAATTCCCCAATGACCAGGTTCGCAGCCAGGC...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251546.8
ENST00000376762.8
CDS-3UTR CCA 90 bp CAGGAGGGAGCCGGGGAAACCGTCACTTGTAAAACCATCAGATCTCGTGAGAACACCCGCAATCTGGCCTaGCTGCGAACCTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: QEGAGETVTCKTIRSRENTRNLA*LRTWSL
Trigger: CAATGACCAGGTTCGCAGCCAGGCCAGATTGCGGGT...GTTCTCACGAGATCTGATGGTTTTACAAGTGACGGTTTCCCCGGCTCCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475435.5
CDS-3UTR CCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGAGACCTCCCTCCACTTaGCATCGCTCTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQRPPST*HRSSAG
Trigger: TCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCT...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CCA 90 bp CATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGTCAGGGTTCAGCAGATaGGGGCTCAGGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: HENSMGENRSHNPITSHQSGFSR*GLRGCQ
Trigger: CTGACACCCCCTGAGCCCCCATCTGCTGAACCCTGA...CTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp GTAGGGCGAAGTCAGGAGAACACTGCTATCTTTCCAGCAGGACAAGAGGCAAGTCAAGGGTTAGAGGTCTaGGGACACCTGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: VGRSQENTAIFPAGQEASQGLEV*GHLAST
Trigger: GGTGGAGGCCAGGTGTCCCCAGACCTCTAACCCTTG...ACTTGCCTCTTGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTTCGCCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp TCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGACCTTTTGGTCAGAGTTACATaGTCACCTCCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: SLKGAHAGFPGHHSGQDLLVRVT*SPPCTC
Trigger: GCAGGTGCAGGGAGGTGACCATGTAACTCTGACCAA...AAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CTGCCCACACTGAGAGGCTCCACAAAGAAGAGGCTGCTAGGGGCAAGGGTTAGATACCCATCTAGCTTCTaGGGCTCCACTGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: LPTLRGSTKKRLLGARVRYPSSF*GSTDSE
Trigger: CTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTA...TCTAACCCTTGCCCCTAGCAGCCTCTTCTTTGTGGAGCCTCTCAGTGTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGGAACCTAACCCCACCTaGTACCCATCTAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LACPCSEGQRTQVEWSQEEPNPT*YPSSFW
Trigger: CCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTTC...CTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CTGCCCACACTGAGAGGCTCCACAAAGAAGAGGCTGCTAGGGGCAAGGGTTAGAGAACCTAACCCCACCTaGTACCCATCTAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LPTLRGSTKKRLLGARVREPNPT*YPSSFW
Trigger: CCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTTC...TCTAACCCTTGCCCCTAGCAGCCTCTTCTTTGTGGAGCCTCTCAGTGTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGCTGTCAGAGCAGGTATTCCCTCAGTCCTCTaGGAACCTAACCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: QTPYHTHPGLMCPAVRAGIPSVL*EPNPTW
Trigger: CCAGGTGGGGTTAGGTTCCCAGAGGACTGAGGGAAT...ACCTGCTCTGACAGCTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GTTCCTGAAATGCCAACCCCTCTGTACCTTAGACAGAAGCCATGCCATTGTACCCCAAGCTGCACCGCCTaGACCTGCGCTTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: VPEMPTPLYLRQKPCHCTPSCTA*TCACLE
Trigger: TTCCAGGCAAGCGCAGGTCCAGGCGGTGCAGCTTGG...GGTACAATGGCATGGCTTCTGTCTAAGGTACAGAGGGGTTGGCATTTCAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GGTGCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTAACTTACAATCATGGTaGTGGAAGGTGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GAPSLKGAHAGFPGHHSGNLQSW*WKVKGK
Trigger: CTTCCCCTTCACCTTCCACCACCATGATTGTAAGTT...ACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp TGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGAACTTACAATCATaGTGGTGGAAGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: CTIRAAASLPVVLPVPAPRNLQS*WWKVKG
Trigger: CCCCTTCACCTTCCACCACCATGATTGTAAGTTCCT...CGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCAGGAACTTACAATCATaGTGGTGGAAGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: VEGEGEATTFFTWRQEGARNLQS*WWKVKG
Trigger: CCCCTTCACCTTCCACCACCATGATTGTAAGTTCCT...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR TCA 90 bp TTGACTTATAGTTCCATATGGCTGGGGAAGCCTCAAGAAACAATCGCTGGGCGCGCGGACGACAGGAGCTaGACGCACAGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LTYSSIWLGKPQETIAGRADDRS*THSWYL
Trigger: CAAGTACCAGCTGTGCGTTCAGCTCCTGTCGTCCGC...GCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR TCA 90 bp CATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGAGGCAGAGCTTGCAGTaGGCTGAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: HENSMGENRSHNPITSHQRQSLQ*AEIAPL
Trigger: CAGTGGCGCAATCTCAGCTCACTGCAAGCTCTGCCT...CTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR TCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGCCGTCACATTCAAGATaGGATGTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQPSHSR*DVGGDT
Trigger: TGTGTCCCCACCCACATCTCATCTTGAATGTGACGG...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471895.1
CDS-3UTR GCA 90 bp GTAGGGCGAAGTCAGGAGAACACTGCTATCTTTCCAGCAGGACAAGAGGCAAGTCTCCCACATCTCAGGTaGTCCGTCTCTGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VGRSQENTAIFPAGQEASLPHLR*SVSERG
Trigger: GCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAG...ACTTGCCTCTTGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTTCGCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp CATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGCCCAGGGGAACATGCTaGACCTCCCACATCTCAGGT +
Preference number: 4 (lower is better)
Translates to: HENSMGENRSHNPITSHQPRGTC*TSHISG
Trigger: ACCTGAGATGTGGGAGGTGCAGCATGTTCCCCTGGG...CTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp CACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTTTTATTTGGCTGCATaGAGTAGGGCGAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: HLHHQGSCKLASCLACPCFYLAA*SRAKSG
Trigger: TCCTGACTTCGCCCTACTGCATGCAGCCAAATAAAA...GCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp GTCCAGCTGTCAGAGCAGGTCCCAATCCTGCTCCCCATCTACCCTGGGACATCCTTTTATTTGGCTGCATaGAGTAGGGCGAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: VQLSEQVPILLPIYPGTSFYLAA*SRAKSG
Trigger: TCCTGACTTCGCCCTACTGCATGCAGCCAAATAAAA...GGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ATCTGCAGGTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACTGTTCCCCACAGCCATaGCTTGTGGCTTCTGGACAC +
Preference number: 4 (lower is better)
Translates to: ICRSRQDHLKSAFPSRNHCSPQP*LVASGH
Trigger: GTGTCCAGAAGCCACAAGCCATGGCTGTGGGGAACA...GTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGACCTGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp TCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGACCTTTGCGAACCTGGTCATTaGGGAATTCCTTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLKGAHAGFPGHHSGQDLCEPGH*GIPSSG
Trigger: ACCAGAGGAAGGAATTCCCCAATGACCAGGTTCGCA...AAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251546.8
ENST00000376762.8
CDS-3UTR CCA 90 bp TTGACTTATAGTTCCATATGGCTGGGGAAGCCTCAAGAAACAATCGCTGGGCGCCGCACAGCTGGTACTTaGACCCGCAATCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LTYSSIWLGKPQETIAGRRTAGT*TRNLAW
Trigger: CCAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCG...GCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR CCA 90 bp ATCTGCAGGTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACGAGACAGATCCAGGCTaGCCTCCAAGCTCGACTTTC +
Preference number: 4 (lower is better)
Translates to: ICRSRQDHLKSAFPSRNHETDPG*PPSSTF
Trigger: GAAAGTCGAGCTTGGAGGCCAGCCTGGATCTGTCTC...GTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGACCTGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGAGAACACAGGTAGAATaGTCCCAGGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQRTQVE*SQEGKG
Trigger: TCCCTTCCCCTCCTGGGACCATTCTACCTGTGTTCT...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GGGAGGTGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATAGAACACAGGTAGAATaGTCCCAGGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GRWTGDSSNPLPYSSRAHRTQVE*SQEGKG
Trigger: TCCCTTCCCCTCCTGGGACCATTCTACCTGTGTTCT...ATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGTTGGTCAGAGTTACATaGTCACCTCCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWLVRVT*SPPCTC
Trigger: GCAGGTGCAGGGAGGTGACCATGTAACTCTGACCAA...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GGGAGGTGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATTACCCATCTAGCTTCTaGGGCTCCACTGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: GRWTGDSSNPLPYSSRAHYPSSF*GSTDSE
Trigger: CTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTA...ATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp AACCTAACCCCACCTGGTACCCATCTAGCTTCTGGGGCTCCACTGACAGTGAGGGGCACACCTTTTATTTaGCTGCATGCAGTAGGGCGA +
Preference number: 4 (lower is better)
Translates to: NLTPPGTHLASGAPLTVRGTPFI*LHAVGR
Trigger: TCGCCCTACTGCATGCAGCCAAATAAAAGGTGTGCC...CCTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGGTTTCTGTGATGGCCTaGTTCCTGAAATGCCAACCC +
Preference number: 4 (lower is better)
Translates to: LACPCSEGQRTQVEWSQEVSVMA*FLKCQP
Trigger: GGGTTGGCATTTCAGGAACCAGGCCATCACAGAAAC...CTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp CAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAGCGGTCCAAGGAGCTTaGGACACATCAGGTACTTTA +
Preference number: 4 (lower is better)
Translates to: QDKRQVPRVVGWETEVLGAVQGA*DTSGTL
Trigger: TAAAGTACCTGATGTGTCCCAAGCTCCTTGGACCGC...TCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376770.5
CDS-3UTR TCA 90 bp CAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGCTGTCAGAGCAGGTAGCCCAGCCCTTTTCTaGCAGCAGTTGTTTACCAGT +
Preference number: 4 (lower is better)
Translates to: QTPYHTHPGLMCPAVRAGSPALF*QQLFTS
Trigger: ACTGGTAAACAACTGCTGTCAGAAAAGGGCTGGGCT...ACCTGCTCTGACAGCTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp CATCTACCCTGGGACATCCTGTACAGGATTCCCTCAGTCCTCTGGGAACCTAACCCACCACCTGGGACTTaGGGCAGGTGTAATATGAAG +
Preference number: 4 (lower is better)
Translates to: HLPWDILYRIPSVLWEPNPPPGT*GRCNMK
Trigger: CTTCATATTACACCTGCCTCAAGTCCCAGGTGGTGG...GTTAGGTTCCCAGAGGACTGAGGGAATCCTGTACAGGATGTCCCAGGGTAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp TGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCCCACCACCTGGGACTTaGGGCAGGTGTAATATGAAG +
Preference number: 4 (lower is better)
Translates to: WTGDSSNPLPYSSRAHVSPPPGT*GRCNMK
Trigger: CTTCATATTACACCTGCCTCAAGTCCCAGGTGGTGG...GGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp TTGACTTATAGTTCCATATGGCTGGGGAAGCCTCAAGAAACAATCGCTGGGCGCAATACCCTTCGGCCTTaGGGTCCACCACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: LTYSSIWLGKPQETIAGRNTLRP*GPPPGT
Trigger: AGTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATT...GCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR GCA 90 bp CATCTACCCTGGGACATCCTGTACAGGATTCCCTCAGTCCTCTGGGAACCTAACTGTCTTGCCTGTCCCTaGTCCGAGGGTCAAAGAACA +
Preference number: 4 (lower is better)
Translates to: HLPWDILYRIPSVLWEPNCLACP*SEGQRT
Trigger: TGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACA...GTTAGGTTCCCAGAGGACTGAGGGAATCCTGTACAGGATGTCCCAGGGTAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp CAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCACCATCAGGGCAGCTaGAAGCTTGCCAGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: QLSCLSLLRGSKNTGRMVHHQGS*KLASCL
Trigger: AAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTG...GACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GTTCCTGAAATGCCAACCCCTCTGTACCTTAGACAGAAGCCATGCCATTGTACCCACAGCCATGGCTTGTaGCTTCTGGACACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VPEMPTPLYLRQKPCHCTHSHGL*LLDTLL
Trigger: CAGGAGGGTGTCCAGAAGCCACAAGCCATGGCTGTG...GGTACAATGGCATGGCTTCTGTCTAAGGTACAGAGGGGTTGGCATTTCAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GGATTTGGGAGGTGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGGGAATTCCTTCCTCTaGTCTCGAGAGAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: GFGRWTGDSSNPLPYSSRGNSFL*SRERSS
Trigger: GGAGGATCTCTCTCGAGACCAGAGGAAGGAATTCCC...CCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCCAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCACGCACAGCTGGTACTTaGACCCGCAATCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSMGENRSHNPRTAGT*TRNLAW
Trigger: CCAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCG...TGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp TCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCAGCATCGCTCTTCTGCTaGATGGTCGCCGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLTIMRTAWGKTAPIIQSASLFC*MVAGSG
Trigger: GCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGC...TGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp AACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGGTCTCTAGACCTCCCTCCACTTaGCATCGCTCTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NSMGENRSHNPITSHQVSRPPST*HRSSAG
Trigger: TCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCT...AGAGACCTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCACGCCGGGCGGGTAGTTaGAGAATGTGTGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSMGENRSHNPRRAGS*RMCGRP
Trigger: AGGTCTCCCACACATTCTCCAACTACCCGCCCGGCG...TGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp GGATTTGGGAGGTGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGAGAACACAGGTAGAATaGTCCCAGGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GFGRWTGDSSNPLPYSSRRTQVE*SQEGKG
Trigger: TCCCTTCCCCTCCTGGGACCATTCTACCTGTGTTCT...CCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCCAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGAGAACACAGGTAGAATaGTCCCAGGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: DRGFFKPPTILIQGSCVQRTQVE*SQEGKG
Trigger: TCCCTTCCCCTCCTGGGACCATTCTACCTGTGTTCT...CTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CATCTACCCTGGGACATCCTGTACAGGATTCCCTCAGTCCTCTGGGAACCTAACGAACCTAACCCCACCTaGTACCCATCTAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: HLPWDILYRIPSVLWEPNEPNPT*YPSSFW
Trigger: CCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTTC...GTTAGGTTCCCAGAGGACTGAGGGAATCCTGTACAGGATGTCCCAGGGTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CCTTCCCAAGCCCAGCCCTTTTCTGACAGCAGTTGTTTACCAGTCAGGGTTCAGGCTCCCCATCTACCCTaGGACATCCTGTACAGGATT +
Preference number: 4 (lower is better)
Translates to: PSQAQPFSDSSCLPVRVQAPHLP*DILYRI
Trigger: AATCCTGTACAGGATGTCCCAGGGTAGATGGGGAGC...CTGAACCCTGACTGGTAAACAACTGCTGTCAGAAAAGGGCTGGGCTTGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp TGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGTTCCAAGGGTGGTTaGCTGGGAGACAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: WTGDSSNPLPYSSRAHVSSSKGG*LGDRGL
Trigger: AAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACT...GGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp ACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGAATGGGGGCACAGGTTAGACTaGGCACACCTTTTATTTGGC +
Preference number: 4 (lower is better)
Translates to: TRGKFQGWLAGRQRSWEWGHRLD*AHLLFG
Trigger: GCCAAATAAAAGGTGTGCCCAGTCTAACCTGTGCCC...CCATTCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp ACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTAACTTACAATCATGGTaGTGGAAGGTGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TCTIRAAASLPVVLPVPANLQSW*WKVKGK
Trigger: CTTCCCCTTCACCTTCCACCACCATGATTGTAAGTT...AGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp TTGACTTATAGTTCCATATGGCTGGGGAAGCCTCAAGAAACAATCGCTGGGCGCGGAGGTCGAGGTGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LTYSSIWLGKPQETIAGRGGRGG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCACCTCGACCTCC...GCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR CCA 90 bp TTGACTTATAGTTCCATATGGCTGGGGAAGCCTCAAGAAACAATCGCTGGGCGCTTTGGGAGGTCGAGGTaGGTGGATCACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LTYSSIWLGKPQETIAGRFGRSR*VDHEVR
Trigger: CCTGACCTCGTGATCCACCCACCTCGACCTCCCAAA...GCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR CCA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCACTTATAGTTCCATATaGCTGGGGAAGCCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: VEGEGEATTFFTWRQEGATYSSI*LGKPQE
Trigger: TTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGT...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR TCA 90 bp GGTGCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTGAGGCAGGTGTAATATaGAGTAACGAAGTATTTCTT +
Preference number: 4 (lower is better)
Translates to: GAPSLKGAHAGFPGHHSGEAGVI*SNEVFL
Trigger: AAGAAATACTTCGTTACTTCATATTACACCTGCCTC...ACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp GAACTCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAAGGCAGAGCTTGCAGTaGGCTGAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSMGENRSHNPRQSLQ*AEIAPL
Trigger: CAGTGGCGCAATCTCAGCTCACTGCAAGCTCTGCCT...TGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR GCA 90 bp GAACTCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAGCAATCTGGCCTGGCTaGGAACCTGGTCATTGGGGA +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSMGENRSHNPAIWPG*EPGHWG
Trigger: TCCCCAATGACCAGGTTCGCAGCCAGGCCAGATTGC...TGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475435.5
CDS-3UTR GCA 90 bp AACCTAACCCCACCTGGTACCCATCTAGCTTCTGGGGCTCCACTGACAGTGAGGAAGTCAGGAGAACACTaGTATCTTTCCAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: NLTPPGTHLASGAPLTVRKSGEH*YLSSRT
Trigger: TGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTT...CCTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp AGAGCACGGCCCATGAGCCCACCCTCCACTTCCCAGATTGGTCAGAGTTACATGAAGTCAGGAGAACACTaGTATCTTTCCAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: RARPMSPPSTSQIGQSYMKSGEH*YLSSRT
Trigger: TGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTT...CATGTAACTCTGACCAATCTGGGAAGTGGAGGGTGGGCTCATGGGCCGTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp CATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGGAGGCTAATTATCACTaGCTCCCGCGGAGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: HENSMGENRSHNPITSHQEANYH*LPRRSK
Trigger: TTTGGACCTCCGCGGGAGGCAGTGATAATTAGCCTC...CTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376770.5
CDS-3UTR CCA 90 bp GAAATGCCAACCCCTCTGTACCTTAGACAGAAGCCATGCCATTGTACCATCTGCATTCCCTCAGTCCTCTaGGAACCTAACCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: EMPTPLYLRQKPCHCTICIPSVL*EPNPTW
Trigger: CCAGGTGGGGTTAGGTTCCCAGAGGACTGAGGGAAT...GCAGATGGTACAATGGCATGGCTTCTGTCTAAGGTACAGAGGGGTTGGCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp TATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGCCTGGATTTGGGAGGTaGACAGGGGATTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: YLSSRTRGKFQGWLAGRQPGFGR*TGDSSN
Trigger: GTTTGAAGAATCCCCTGTCCACCTCCCAAATCCAGG...CTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp CATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGAGTTCCAAGGGTGGTTaGCTGGGAGACAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: HENSMGENRSHNPITSHQSSKGG*LGDRGL
Trigger: AAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACT...CTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp GTAGGGCGAAGTCAGGAGAACACTGCTATCTTTCCAGCAGGACAAGAGGCAAGTAGCCCAGCCCTTTTCTaGCAGCAGTTGTTTACCAGT +
Preference number: 4 (lower is better)
Translates to: VGRSQENTAIFPAGQEASSPALF*QQLFTS
Trigger: ACTGGTAAACAACTGCTGTCAGAAAAGGGCTGGGCT...ACTTGCCTCTTGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTTCGCCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR TCA 90 bp GAACTCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCACATGGTGGTGGAAGGTaGAGGGGAAGCAACGACCTT +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSMGENRSHNPHGGGR*RGSNDL
Trigger: AAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATG...TGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR GCA 90 bp CTGCTATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGTTTTATTTGGCTGCATaGAGTAGGGCGAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LLSFQQDKRQVPRVVGWEFYLAA*SRAKSG
Trigger: TCCTGACTTCGCCCTACTGCATGCAGCCAAATAAAA...CTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR GCA 90 bp TATCTTTCCAGCAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGGGACCACCTAAAGTCTaGCTTTCCTTCCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: YLSSRTRGKFQGWLAGRQGPPKV*LSFQKP
Trigger: TGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCC...CTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp CAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCAGAGGTGGAAGGCACTaGCCAAGGTCAAAAATAAGG +
Preference number: 4 (lower is better)
Translates to: QLSCLSLLRGSKNTGRMVRGGRH*PRSKIR
Trigger: CCTTATTTTTGACCTTGGGCAGTGCCTTCCACCTCT...GACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376770.5
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAAGACCTCCCTCCACTTaGCATCGCTCTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSMGENRSHNPRPPST*HRSSAG
Trigger: TCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCT...TGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp GTTCCTGAAATGCCAACCCCTCTGTACCTTAGACAGAAGCCATGCCATTGTACCGTGGCACTGCTGATCTaGCACAAGGTGGACTCAAGA +
Preference number: 4 (lower is better)
Translates to: VPEMPTPLYLRQKPCHCTVALLI*HKVDSR
Trigger: TCTTGAGTCCACCTTGTGCCAGATCAGCAGTGCCAC...GGTACAATGGCATGGCTTCTGTCTAAGGTACAGAGGGGTTGGCATTTCAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGTCTAAATCATGGTGGTaGAAGGTGAAGGGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQSKSWW*KVKGKQ
Trigger: TTGCTTCCCCTTCACCTTCCACCACCATGATTTAGA...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471895.1
CDS-3UTR CCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGATCTCTAAATCATGGTaGTGGAAGGTGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQISKSW*WKVKGK
Trigger: CTTCCCCTTCACCTTCCACCACCATGATTTAGAGAT...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471895.1
CDS-3UTR GCA 90 bp ATCTGCAGGTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACTTTTATTTGGCTGCATaGAGTAGGGCGAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: ICRSRQDHLKSAFPSRNHFYLAA*SRAKSG
Trigger: TCCTGACTTCGCCCTACTGCATGCAGCCAAATAAAA...GTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGACCTGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAGGGAATTCCTTCCTCTaGTCTCGAGAGAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSMGENRSHNPGNSFL*SRERSS
Trigger: GGAGGATCTCTCTCGAGACCAGAGGAAGGAATTCCC...TGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CCA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGATAGTTCCATATGGCTaGGGAAGCCTCAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQIVPYG*GSLKKQ
Trigger: TTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTAT...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR TCA 90 bp CTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGGAGGCAGGTGTAATATaGAGTAACGAAGTATTTCTT +
Preference number: 4 (lower is better)
Translates to: LACPCSEGQRTQVEWSQEEAGVI*SNEVFL
Trigger: AAGAAATACTTCGTTACTTCATATTACACCTGCCTC...CTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR TCA 90 bp TTGACTTATAGTTCCATATGGCTGGGGAAGCCTCAAGAAACAATCGCTGGGCGCCCCTGGCCAACATGGTaGAACTCCATCTCTAAATCA +
Preference number: 4 (lower is better)
Translates to: LTYSSIWLGKPQETIAGRPWPTW*NSISKS
Trigger: TGATTTAGAGATGGAGTTTCACCATGTTGGCCAGGG...GCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471895.1
CDS-3UTR GCA 90 bp GTAGGGCGAAGTCAGGAGAACACTGCTATCTTTCCAGCAGGACAAGAGGCAAGTAAGTCAGGAGAACACTaGTATCTTTCCAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: VGRSQENTAIFPAGQEASKSGEH*YLSSRT
Trigger: TGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTT...ACTTGCCTCTTGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTTCGCCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CCA 90 bp GAAATGCCAACCCCTCTGTACCTTAGACAGAAGCCATGCCATTGTACCATCTGCCTCCACTTCCCAGATTaGTCAGAGTTACATGGTCAC +
Preference number: 4 (lower is better)
Translates to: EMPTPLYLRQKPCHCTICLHFPD*SELHGH
Trigger: GTGACCATGTAACTCTGACCAATCTGGGAAGTGGAG...GCAGATGGTACAATGGCATGGCTTCTGTCTAAGGTACAGAGGGGTTGGCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAGGGCACAGGTTAGACTaGGCACACCTTTTATTTGGC +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSMGENRSHNPGHRLD*AHLLFG
Trigger: GCCAAATAAAAGGTGTGCCCAGTCTAACCTGTGCCC...TGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp CATCTACCCTGGGACATCCTGTACAGGATTCCCTCAGTCCTCTGGGAACCTAACATAGTTCCATATGGCTaGGGAAGCCTCAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: HLPWDILYRIPSVLWEPNIVPYG*GSLKKQ
Trigger: TTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTAT...GTTAGGTTCCCAGAGGACTGAGGGAATCCTGTACAGGATGTCCCAGGGTAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp CATCTACCCTGGGACATCCTGTACAGGATTCCCTCAGTCCTCTGGGAACCTAACACTTATAGTTCCATATaGCTGGGGAAGCCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: HLPWDILYRIPSVLWEPNTYSSI*LGKPQE
Trigger: TTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGT...GTTAGGTTCCCAGAGGACTGAGGGAATCCTGTACAGGATGTCCCAGGGTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp TTGACTTATAGTTCCATATGGCTGGGGAAGCCTCAAGAAACAATCGCTGGGCGCTCCATCTCTAAATCATaGTGGTGGAAGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LTYSSIWLGKPQETIAGRSISKS*WWKVKG
Trigger: CCCCTTCACCTTCCACCACCATGATTTAGAGATGGA...GCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471895.1
CDS-3UTR CCA 90 bp CATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGATAGTTCCATATGGCTaGGGAAGCCTCAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: HENSMGENRSHNPITSHQIVPYG*GSLKKQ
Trigger: TTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTAT...CTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR GCA 90 bp TCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTAGACAGAAGCCATaGCATTGTACCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLTIMRTAWGKTAPIIQSLRQKP*HCTICR
Trigger: CCTGCAGATGGTACAATGGCATGGCTTCTGTCTAAG...TGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAAACTTACAATCATGGTaGTGGAAGGTGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSMGENRSHNPNLQSW*WKVKGK
Trigger: CTTCCCCTTCACCTTCCACCACCATGATTGTAAGTT...TGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS GCA 90 bp GCCTGCGCTCGGCCGCCGCGGCACGATCCGTTGGGCCGCCCAAGCTaGACCGCCTGGACCTGCGCTTGCCTGGAAAGCGAGGCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: ACARPPRHDPLGRPS*TAWTCACLESEAPP
Trigger: GGGCGGGGCCTCGCTTTCCAGGCAAGCGCAGGTCCAGGCGGTGCAGCTTGGGCGGCCCAACGGATCGTGCCGCGGCGGCCGAGCGCAGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376770.5
ENST00000425796.5
CDS CCA 90 bp GGACACCCTCCTGTAGCTGCGCTCGGCCGCCGCGGCACGATCCGTTaGGCCGCCCAAGCTGCACCGCCTGGACCTGCGCTTGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: GHPPVAALGRRGTIR*AAQAAPPGPALAWK
Trigger: TTTCCAGGCAAGCGCAGGTCCAGGCGGTGCAGCTTGGGCGGCCCAACGGATCGTGCCGCGGCGGCCGAGCGCAGCTACAGGAGGGTGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251547.10
CDS CCA 90 bp GGACATGATCTCCTGCCTGCGCTCGGCCGCCGCGGCACGATCCGTTaGGCCGCCCAAGCTGCACCGCCTGGACCTGCGCTTGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: GHDLLPALGRRGTIR*AAQAAPPGPALAWK
Trigger: TTTCCAGGCAAGCGCAGGTCCAGGCGGTGCAGCTTGGGCGGCCCAACGGATCGTGCCGCGGCGGCCGAGCGCAGGCAGGAGATCATGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376770.5
ENST00000425796.5
CDS TCA 90 bp GCTTCTGGACACCCTCCTGTAGCTTTCCCAGCCTCCTCGGTCCGCTaGGGAACCCGCAGCCCCGGGCCTCGAGCAGACTGCTGGGACTGC +
Preference number: 5 (lower is better)
Translates to: ASGHPPVAFPASSVR*GTRSPGPRADCWDC
Trigger: GCAGTCCCAGCAGTCTGCTCGAGGCCCGGGGCTGCGGGTTCCTCAGCGGACCGAGGAGGCTGGGAAAGCTACAGGAGGGTGTCCAGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251546.8
CDS CCA 90 bp CTCCCTCCACTTGGCATCGCTCTTCTGCTGGATGGTCGCCGGGTCTaGCTGGAAGGTCCCCAGAGGCGCGTGCGCGGACGACAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LPPLGIALLLDGRRV*LEGPQRRVRGRQEL
Trigger: CAGCTCCTGTCGTCCGCGCACGCGCCTCTGGGGACCTTCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGCCAAGTGGAGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376760.5
ENST00000376762.8
ENST00000376768.5
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CAA 90 bp GCTACTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGAGCTTGCCGCGGCACGATCCGTaGGGCCGCCCAAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: ATPEAEAGEWREPGRQSLPRHDP*GRPSCT
Trigger: GGTGCAGCTTGGGCGGCCCAACGGATCGTGCCGCGG...CAAGCTCTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAGTAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS TCA 90 bp TCTGGCTGGAAGGTCCCCAGAGGCGCGTGCGCGGACGACAGGAGCTaGACGCACAGCTGGTACTTGGACCCGCAATCTGGCCTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: SGWKVPRGACADDRS*THSWYLDPQSGLAA
Trigger: CGCAGCCAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCGTTCAGCTCCTGTCGTCCGCGCACGCGCCTCTGGGGACCTTCCAGCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376760.5
ENST00000376762.8
ENST00000376768.5
ENST00000376770.5
ENST00000425796.5
ENST00000471895.1
ENST00000475435.5
CDS CCA 90 bp ATGTGTGGGAGACCTCCCTCCACTTGGCATCGCTCTTCTGCTGGATaGTCGCCGGGTCTGGCTGGAAGGTCCCCAGAGGCGCGTGCGCGG +
Preference number: 5 (lower is better)
Translates to: MCGRPPSTWHRSSAG*SPGLAGRSPEARAR
Trigger: CCGCGCACGCGCCTCTGGGGACCTTCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCTCCCACACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376760.5
ENST00000376762.8
ENST00000376768.5
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CAA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCACGCCTGGACCTGCGCTaGCCTGGAAAGCGAGGCCCC +
Preference number: 5 (lower is better)
Translates to: TSSEQAGRARDWEQQTGARLDLR*PGKRGP
Trigger: GGGGCCTCGCTTTCCAGGCAAGCGCAGGTCCAGGCG...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376770.5
CDS CCA 90 bp GAGAATGTGTGGGAGACCTCCCTCCACTTGGCATCGCTCTTCTGCTaGATGGTCGCCGGGTCTGGCTGGAAGGTCCCCAGAGGCGCGTGC +
Preference number: 5 (lower is better)
Translates to: ENVWETSLHLASLFC*MVAGSGWKVPRGAC
Trigger: GCACGCGCCTCTGGGGACCTTCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCTCCCACACATTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376760.5
ENST00000376762.8
ENST00000376768.5
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CAA 90 bp GGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGACGCACAGCTGGTACTaGGACCCGCAATCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: GLGMLSKPEGAGPGFGRWTHSWY*DPQSGL
Trigger: CAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCGT...CCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp GGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGGAGACCTCCCTCCACTaGGCATCGCTCTTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GLGMLSKPEGAGPGFGRWETSLH*ASLFCW
Trigger: CCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCTC...CCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp CTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGAGCTTGCAGTGGGTGGGGTGGGGGCTaGGAATGCTCTCCAAGCCAG +
Preference number: 5 (lower is better)
Translates to: LQRLRQVNGANLGGRACSGWGGG*ECSPSQ
Trigger: CTGGCTTGGAGAGCATTCCAAGCCCCCACCCCACCC...ACTGCAAGCTCTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS CCA 90 bp GAGGCGCGTGCGCGGACGACAGGAGCTGAACGCACAGCTGGTACTTaGACCCGCAATCTGGCCTGGCTGCGAACCTGGTCATTGGGGAAT +
Preference number: 5 (lower is better)
Translates to: EARARTTGAERTAGT*TRNLAWLRTWSLGN
Trigger: ATTCCCCAATGACCAGGTTCGCAGCCAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCGTTCAGCTCCTGTCGTCCGCGCACGCGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251546.8
ENST00000376760.5
ENST00000376762.8
ENST00000425796.5
ENST00000475435.5
CDS-3UTR CAA 90 bp ATGCTGCACCTCCCACATCTCAGGTGCTCCGTCTCTGAAAGGGGCACACGCAGGCCCCACAGCCATGGCTaGTGGCTTCTGGACACCCTC +
Preference number: 5 (lower is better)
Translates to: MLHLPHLRCSVSERGTRRPHSHG*WLLDTL
Trigger: GAGGGTGTCCAGAAGCCACAAGCCATGGCTGTGGGG...CCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAGGTGCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp GCTACTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGAGCTTGACGCACAGCTGGTACTaGGACCCGCAATCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: ATPEAEAGEWREPGRQSLTHSWY*DPQSGL
Trigger: CAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCGT...CAAGCTCTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CAA 90 bp CCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGGAGACCTCCCTCCACTaGGCATCGCTCTTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PSGQLQACQLSCLSLLRGETSLH*ASLFCW
Trigger: CCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCTC...CCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp AGACAGGGGCAGAGCACGGCCCATGAGCCCACCCTCCACTTCCCAGATTGGTCAATGGTGATGCTGCTGTaGGTGACCCTCGGGCCGTAC +
Preference number: 5 (lower is better)
Translates to: RQGQSTAHEPTLHFPDWSMVMLL*VTLGPY
Trigger: GTACGGCCCGAGGGTCACCAACAGCAGCATCACCAT...TGACCAATCTGGGAAGTGGAGGGTGGGCTCATGGGCCGTGCTCTGCCCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp CCTTCCCAAGCCCAGCCCTTTTCTGACAGCAGTTGTTTACCAGTCAGGGTTCAGCCGCGGCACGATCCGTaGGGCCGCCCAAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: PSQAQPFSDSSCLPVRVQPRHDP*GRPSCT
Trigger: GGTGCAGCTTGGGCGGCCCAACGGATCGTGCCGCGG...CTGAACCCTGACTGGTAAACAACTGCTGTCAGAAAAGGGCTGGGCTTGGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp GCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAACGCACAGCTGGTACTaGGACCCGCAATCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: APSLKGAHAGFPGHHSGQTHSWY*DPQSGL
Trigger: CAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCGT...TTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp CCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCATGGTGATGCTGCTGTaGGTGACCCTCGGGCCGTAC +
Preference number: 5 (lower is better)
Translates to: PAPSGQLQACQLSCLSLLMVMLL*VTLGPY
Trigger: GTACGGCCCGAGGGTCACCAACAGCAGCATCACCAT...GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp GCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCCAGGAGGGGAGCTTGCCAGTTGTCTaGCCTGTCCCTGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: ACPCSEGQRTQVEWSQEGSLPVV*PVPAPR
Trigger: CCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCT...CCCCTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp CACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCAGCTTGCCAGTTGTCTaGCCTGTCCCTGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: HLHHQGSCKLASCLACPCSLPVV*PVPAPR
Trigger: CCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCT...GCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp TGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGCTTGCCAGTTGTCTaGCCTGTCCCTGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: CTIRAAASLPVVLPVPAPSLPVV*PVPAPR
Trigger: CCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCT...CGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp CCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGCTGCAAGCTTGCCAGTaGTCTTGCCTGTCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: PSGQLQACQLSCLSLLRGLQACQ*SCLSLL
Trigger: GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAG...CCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp GTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGGGAGCCCAATACCCTTCGGCCTaGAGGTCCACCACCTGGGAC +
Preference number: 5 (lower is better)
Translates to: VEGEGEATTFFTWRQEGAQYPSA*RSTTWD
Trigger: GTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATTG...GGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR CAA 90 bp GGGCTTGGAATGCTCTCCAAGCCAGAGGGGGCCGGGCCTGGATTTGGGAGGTGGAAGCCCGGATCTTCTTaGATTCCAGGGCCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: GLGMLSKPEGAGPGFGRWKPGSS*IPGPAF
Trigger: AAAGGCTGGCCCTGGAATCAAAGAAGATCCGGGCTT...CCACCTCCCAAATCCAGGCCCGGCCCCCTCTGGCTTGGAGAGCATTCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376770.5
CDS-3UTR CAA 90 bp CAGGACAAGAGGCAAGTTCCAAGGGTGGTTGGCTGGGAGACAGAGGTCTTGGGACCCCACAGCCATGGCTaGTGGCTTCTGGACACCCTC +
Preference number: 5 (lower is better)
Translates to: QDKRQVPRVVGWETEVLGPHSHG*WLLDTL
Trigger: GAGGGTGTCCAGAAGCCACAAGCCATGGCTGTGGGG...TCCCAAGACCTCTGTCTCCCAGCCAACCACCCTTGGAACTTGCCTCTTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp GCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAATTCTCGGGCAGCTCGTaGATGTTCCCCACAGCCATG +
Preference number: 5 (lower is better)
Translates to: APSLKGAHAGFPGHHSGQFSGSS*MFPTAM
Trigger: CATGGCTGTGGGGAACATCAACGAGCTGCCCGAGAA...TTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp ATGCTGCACCTCCCACATCTCAGGTGCTCCGTCTCTGAAAGGGGCACACGCAGGCTGCAAGCTTGCCAGTaGTCTTGCCTGTCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: MLHLPHLRCSVSERGTRRLQACQ*SCLSLL
Trigger: GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAG...CCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAGGTGCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp ACCTCTTCTGAGCAGGCAGGCAGAGCGAGAGACTGGGAGCAGCAGACAGGGGCATGGGAGACAGAGGTCTaGGGAATGGCAGTTCTAGGG +
Preference number: 5 (lower is better)
Translates to: TSSEQAGRARDWEQQTGAWETEV*GMAVLG
Trigger: CCCTAGAACTGCCATTCCCAAGACCTCTGTCTCCCA...TGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp CTCCAGAGGCTGAGGCAGGTGAATGGCGCGAACCTGGGAGGCAGAGCTTGCAGTGGGCACACCTTTTATTaGGCTGCATGCAGTAGGGCG +
Preference number: 5 (lower is better)
Translates to: LQRLRQVNGANLGGRACSGHTFY*AACSRA
Trigger: CGCCCTACTGCATGCAGCCAAATAAAAGGTGTGCCC...ACTGCAAGCTCTGCCTCCCAGGTTCGCGCCATTCACCTGCCTCAGCCTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp GCTCCGTCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAACTGCGAACCTGGTCATaGGGGAATTCCTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: APSLKGAHAGFPGHHSGQLRTWS*GNSFLW
Trigger: CCAGAGGAAGGAATTCCCCAATGACCAGGTTCGCAG...TTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251546.8
ENST00000376762.8
CDS-3UTR CAA 90 bp TCTCTGAAAGGGGCACACGCAGGCTTCCCCGGCCATCATTCAGGTCAAGACCTTGAGACCTCCCTCCACTaGGCATCGCTCTTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SLKGAHAGFPGHHSGQDLETSLH*ASLFCW
Trigger: CCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCTC...AAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp CAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACGAGACCTCCCTCCACTaGGCATCGCTCTTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: QLQACQLSCLSLLRGSKNETSLH*ASLFCW
Trigger: CCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCTC...GTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp AACCTAACCCCACCTGGTACCCATCTAGCTTCTGGGGCTCCACTGACAGTGAGGAGCTTGCCAGTTGTCTaGCCTGTCCCTGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: NLTPPGTHLASGAPLTVRSLPVV*PVPAPR
Trigger: CCTCGGAGCAGGGACAGGCAAGACAACTGGCAAGCT...CCTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp GACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCAGGGGTGGGGTGGGGGCTaGGAATGCTCTCCAAGCCAG +
Preference number: 5 (lower is better)
Translates to: DRGFFKPPTILIQGSCVQGWGGG*ECSPSQ
Trigger: CTGGCTTGGAGAGCATTCCAAGCCCCCACCCCACCC...CTGGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp TGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCGGGTGGGGTGGGGGCTaGGAATGCTCTCCAAGCCAG +
Preference number: 5 (lower is better)
Translates to: WTGDSSNPLPYSSRAHVSGWGGG*ECSPSQ
Trigger: CTGGCTTGGAGAGCATTCCAAGCCCCCACCCCACCC...GGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp CAGGAGGGAGCCGGGGAAACCGTCACTTGTAAAACCATCAGATCTCGTGAGAACGGGTGGGGTGGGGGCTaGGAATGCTCTCCAAGCCAG +
Preference number: 5 (lower is better)
Translates to: QEGAGETVTCKTIRSRENGWGGG*ECSPSQ
Trigger: CTGGCTTGGAGAGCATTCCAAGCCCCCACCCCACCC...GTTCTCACGAGATCTGATGGTTTTACAAGTGACGGTTTCCCCGGCTCCCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp GTCCAGCTGTCAGAGCAGGTCCCAATCCTGCTCCCCATCTACCCTGGGACATCCTGGGAGACAGAGGTCTaGGGAATGGCAGTTCTAGGG +
Preference number: 5 (lower is better)
Translates to: VQLSEQVPILLPIYPGTSWETEV*GMAVLG
Trigger: CCCTAGAACTGCCATTCCCAAGACCTCTGTCTCCCA...GGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp CCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCGGCGGTCCAAGGAGCTaGGGACACATCAGGTACTTT +
Preference number: 5 (lower is better)
Translates to: PAPSGQLQACQLSCLSLLGGPRS*GHIRYF
Trigger: AAAGTACCTGATGTGTCCCAAGCTCCTTGGACCGCC...GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376770.5
CDS-3UTR CAA 90 bp ATCTGCAGGTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACCCCCACAGCCATGGCTaGTGGCTTCTGGACACCCTC +
Preference number: 5 (lower is better)
Translates to: ICRSRQDHLKSAFPSRNHPHSHG*WLLDTL
Trigger: GAGGGTGTCCAGAAGCCACAAGCCATGGCTGTGGGG...GTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGACCTGCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp ACCTGCACCATCAGGGCAGCTGCAAGCTTGCCAGTTGTCTTGCCTGTCCCTGCTCTGCGAACCTGGTCATaGGGGAATTCCTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: TCTIRAAASLPVVLPVPALRTWS*GNSFLW
Trigger: CCAGAGGAAGGAATTCCCCAATGACCAGGTTCGCAG...AGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAGCTGCCCTGATGGTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251546.8
ENST00000376762.8
CDS-3UTR CAA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGACGCACAGCTGGTACTaGGACCCGCAATCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQTHSWY*DPQSGL
Trigger: CAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCGT...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CAA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGGAGACCTCCCTCCACTaGGCATCGCTCTTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQETSLH*ASLFCW
Trigger: CCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCTC...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CAA 90 bp ATCATGGTGGTGGAAGGTGAAGGGGAAGCAACGACCTTCTTCACATGGCGGCAGATGGTGATGCTGCTGTaGGTGACCCTCGGGCCGTAC +
Preference number: 5 (lower is better)
Translates to: IMVVEGEGEATTFFTWRQMVMLL*VTLGPY
Trigger: GTACGGCCCGAGGGTCACCAACAGCAGCATCACCAT...CTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS-3UTR CAA 90 bp GGGAGGTGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATTTCTCGGGCAGCTCGTaGATGTTCCCCACAGCCATG +
Preference number: 5 (lower is better)
Translates to: GRWTGDSSNPLPYSSRAHFSGSS*MFPTAM
Trigger: CATGGCTGTGGGGAACATCAACGAGCTGCCCGAGAA...ATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp CATCTACCCTGGGACATCCTGTACAGGATTCCCTCAGTCCTCTGGGAACCTAACATGGTGATGCTGCTGTaGGTGACCCTCGGGCCGTAC +
Preference number: 5 (lower is better)
Translates to: HLPWDILYRIPSVLWEPNMVMLL*VTLGPY
Trigger: GTACGGCCCGAGGGTCACCAACAGCAGCATCACCAT...GTTAGGTTCCCAGAGGACTGAGGGAATCCTGTACAGGATGTCCCAGGGTAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp ATCTGCAGGTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACATGGTGATGCTGCTGTaGGTGACCCTCGGGCCGTAC +
Preference number: 5 (lower is better)
Translates to: ICRSRQDHLKSAFPSRNHMVMLL*VTLGPY
Trigger: GTACGGCCCGAGGGTCACCAACAGCAGCATCACCAT...GTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGACCTGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp ATGCTGCACCTCCCACATCTCAGGTGCTCCGTCTCTGAAAGGGGCACACGCAGGTTCTTGACCTGGTCATaGGGGAATTCCTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: MLHLPHLRCSVSERGTRRFLTWS*GNSFLW
Trigger: CCAGAGGAAGGAATTCCCCAATGACCAGGTCAAGAA...CCTGCGTGTGCCCCTTTCAGAGACGGAGCACCTGAGATGTGGGAGGTGCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp GTCCAGCTGTCAGAGCAGGTCCCAATCCTGCTCCCCATCTACCCTGGGACATCCTTCTTGACCTGGTCATaGGGGAATTCCTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: VQLSEQVPILLPIYPGTSFLTWS*GNSFLW
Trigger: CCAGAGGAAGGAATTCCCCAATGACCAGGTCAAGAA...GGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp TGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGTGTCCCAATACCCTTCGGCCTaGAGGTCCACCACCTGGGAC +
Preference number: 5 (lower is better)
Translates to: WTGDSSNPLPYSSRAHVSQYPSA*RSTTWD
Trigger: GTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATTG...GGACACATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp CAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCCAATACCCTTCGGCCTaGAGGTCCACCACCTGGGAC +
Preference number: 5 (lower is better)
Translates to: QLSCLSLLRGSKNTGRMVQYPSA*RSTTWD
Trigger: GTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATTG...GACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS CCA 90 bp AATCTGGCCTGGCTGCGAACCTGGTCATTGGGGAATTCCTTCCTCTaGTCTCGAGAGAGATCCTCCACCTTCCACTCATCGCCTCCATTC +
Preference number: 5 (lower is better)
Translates to: NLAWLRTWSLGNSFL*SRERSSTFHSSPPF
Trigger: GAATGGAGGCGATGAGTGGAAGGTGGAGGATCTCTCTCGAGACCAGAGGAAGGAATTCCCCAATGACCAGGTTCGCAGCCAGGCCAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251546.8
ENST00000376760.5
ENST00000376762.8
ENST00000425796.5
ENST00000475435.5
CDS-3UTR CAA 90 bp GTAGGGCGAAGTCAGGAGAACACTGCTATCTTTCCAGCAGGACAAGAGGCAAGTACGCACAGCTGGTACTaGGACCCGCAATCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: VGRSQENTAIFPAGQEASTHSWY*DPQSGL
Trigger: CAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCGT...ACTTGCCTCTTGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTTCGCCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp AGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACAGGGCACAGGTTCTGCAAGCTTGCCAGTaGTCTTGCCTGTCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: RQDHLKSAFPSRNHRAQVLQACQ*SCLSLL
Trigger: GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAG...AACCTGTGCCCTGTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp GGGAGGTGGACAGGGGATTCTTCAAACCCCCTACCATACTCATCCAGGGCTCATGGGCACACCTTTTATTaGGCTGCATGCAGTAGGGCG +
Preference number: 5 (lower is better)
Translates to: GRWTGDSSNPLPYSSRAHGHTFY*AACSRA
Trigger: CGCCCTACTGCATGCAGCCAAATAAAAGGTGTGCCC...ATGAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp AACCTAACCCCACCTGGTACCCATCTAGCTTCTGGGGCTCCACTGACAGTGAGGACAGAAGCCATGCCATaGTACCATCTGCAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: NLTPPGTHLASGAPLTVRTEAMP*YHLQVQ
Trigger: CTGGACCTGCAGATGGTACAATGGCATGGCTTCTGT...CCTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp GTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCCAGAAACCACAGGGCACATGTAATCTCAGCACTTaGGGAGGTCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: VQAGPPKVCLSFQKPQGTCNLST*GGRGGW
Trigger: CCACCCACCTCGACCTCCCAAAGTGCTGAGATTACA...TGTGCCCTGTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp CAGGAGGGAGCCGGGGAAACCGTCACTTGTAAAACCATCAGATCTCGTGAGAACCTGCGAACCTGGTCATaGGGGAATTCCTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: QEGAGETVTCKTIRSRENLRTWS*GNSFLW
Trigger: CCAGAGGAAGGAATTCCCCAATGACCAGGTTCGCAG...GTTCTCACGAGATCTGATGGTTTTACAAGTGACGGTTTCCCCGGCTCCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475435.5
CDS-3UTR CAA 90 bp TTGACTTATAGTTCCATATGGCTGGGGAAGCCTCAAGAAACAATCGCTGGGCGCACGCACAGCTGGTACTaGGACCCGCAATCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: LTYSSIWLGKPQETIAGRTHSWY*DPQSGL
Trigger: CAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCGT...GCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR CAA 90 bp TTGACTTATAGTTCCATATGGCTGGGGAAGCCTCAAGAAACAATCGCTGGGCGCGAGACCTCCCTCCACTaGGCATCGCTCTTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LTYSSIWLGKPQETIAGRETSLH*ASLFCW
Trigger: CCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCTC...GCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR CAA 90 bp CAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCGGGCACACCTTTTATTaGGCTGCATGCAGTAGGGCG +
Preference number: 5 (lower is better)
Translates to: QLSCLSLLRGSKNTGRMVGHTFY*AACSRA
Trigger: CGCCCTACTGCATGCAGCCAAATAAAAGGTGTGCCC...GACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376762.8
ENST00000376770.5
CDS-3UTR CAA 90 bp CCATTGTACCATCTGCAGGTCCAGGCAGGACCACCTAAAGTCTGCCTTTCCTTCGGGCACACCTTTTATTaGGCTGCATGCAGTAGGGCG +
Preference number: 5 (lower is better)
Translates to: PLYHLQVQAGPPKVCLSFGHTFY*AACSRA
Trigger: CGCCCTACTGCATGCAGCCAAATAAAAGGTGTGCCC...GAAGGAAAGGCAGACTTTAGGTGGTCCTGCCTGGACCTGCAGATGGTACAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp TTGACTTATAGTTCCATATGGCTGGGGAAGCCTCAAGAAACAATCGCTGGGCGCCTGCAAGCTTGCCAGTaGTCTTGCCTGTCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LTYSSIWLGKPQETIAGRLQACQ*SCLSLL
Trigger: GAGCAGGGACAGGCAAGACAACTGGCAAGCTTGCAG...GCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp CATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGTGGGAGACAGAGGTCTaGGGAATGGCAGTTCTAGGG +
Preference number: 5 (lower is better)
Translates to: HENSMGENRSHNPITSHQWETEV*GMAVLG
Trigger: CCCTAGAACTGCCATTCCCAAGACCTCTGTCTCCCA...CTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp AACAGCATGGGGGAAAACCGCTCCCATAATCCAATCACTTCCCACCAGGTCTCTTGTAATCTCAGCACTTaGGGAGGTCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: NSMGENRSHNPITSHQVSCNLST*GGRGGW
Trigger: CCACCCACCTCGACCTCCCAAAGTGCTGAGATTACA...AGAGACCTGGTGGGAAGTGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp TCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAATCAATGGTGATGCTGCTGTaGGTGACCCTCGGGCCGTAC +
Preference number: 5 (lower is better)
Translates to: SLTIMRTAWGKTAPIIQSMVMLL*VTLGPY
Trigger: GTACGGCCCGAGGGTCACCAACAGCAGCATCACCAT...TGATTGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000475435.5
CDS-3UTR CAA 90 bp GTTCCTGAAATGCCAACCCCTCTGTACCTTAGACAGAAGCCATGCCATTGTACCTGGGAGACAGAGGTCTaGGGAATGGCAGTTCTAGGG +
Preference number: 5 (lower is better)
Translates to: VPEMPTPLYLRQKPCHCTWETEV*GMAVLG
Trigger: CCCTAGAACTGCCATTCCCAAGACCTCTGTCTCCCA...GGTACAATGGCATGGCTTCTGTCTAAGGTACAGAGGGGTTGGCATTTCAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp GTAGGGCGAAGTCAGGAGAACACTGCTATCTTTCCAGCAGGACAAGAGGCAAGTACAGAAGCCATGCCATaGTACCATCTGCAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: VGRSQENTAIFPAGQEASTEAMP*YHLQVQ
Trigger: CTGGACCTGCAGATGGTACAATGGCATGGCTTCTGT...ACTTGCCTCTTGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTTCGCCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp TTGACTTATAGTTCCATATGGCTGGGGAAGCCTCAAGAAACAATCGCTGGGCGCTGTAATCTCAGCACTTaGGGAGGTCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LTYSSIWLGKPQETIAGRCNLST*GGRGGW
Trigger: CCACCCACCTCGACCTCCCAAAGTGCTGAGATTACA...GCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376770.5
ENST00000471895.1
CDS-3UTR CAA 90 bp CAGTTGTCTTGCCTGTCCCTGCTCCGAGGGTCAAAGAACACAGGTAGAATGGTCATGTCCGTAAAGCTGTaGGCAAAGAGTAACACCAGG +
Preference number: 5 (lower is better)
Translates to: QLSCLSLLRGSKNTGRMVMSVKL*AKSNTR
Trigger: CCTGGTGTTACTCTTTGCCAACAGCTTTACGGACAT...GACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS CCA 90 bp GTAACGAAGTATTTCTTGACCTGGTCATTGGGGAATTCCTTCCTCTaGTCTCGAGAGAGATCCTCCACCTTCCACTCATCGCCTCCATTC +
Preference number: 5 (lower is better)
Translates to: VTKYFLTWSLGNSFL*SRERSSTFHSSPPF
Trigger: GAATGGAGGCGATGAGTGGAAGGTGGAGGATCTCTCTCGAGACCAGAGGAAGGAATTCCCCAATGACCAGGTCAAGAAATACTTCGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp CAGGAGGGAGCCGGGGAAACCGTCACTTGTAAAACCATCAGATCTCGTGAGAACGTAACGAAGTATTTCTaGACCTGGTCATTGGGGAAT +
Preference number: 5 (lower is better)
Translates to: QEGAGETVTCKTIRSRENVTKYF*TWSLGN
Trigger: ATTCCCCAATGACCAGGTCAAGAAATACTTCGTTAC...GTTCTCACGAGATCTGATGGTTTTACAAGTGACGGTTTCCCCGGCTCCCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp GTTCCTGAAATGCCAACCCCTCTGTACCTTAGACAGAAGCCATGCCATTGTACCATGTCCGTAAAGCTGTaGGCAAAGAGTAACACCAGG +
Preference number: 5 (lower is better)
Translates to: VPEMPTPLYLRQKPCHCTMSVKL*AKSNTR
Trigger: CCTGGTGTTACTCTTTGCCAACAGCTTTACGGACAT...GGTACAATGGCATGGCTTCTGTCTAAGGTACAGAGGGGTTGGCATTTCAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS-3UTR CAA 90 bp GAACTCACTCACTATCATGAGAACAGCATGGGGGAAAACCGCTCCCATAATCCAGTAACGAAGTATTTCTaGACCTGGTCATTGGGGAAT +
Preference number: 5 (lower is better)
Translates to: ELTHYHENSMGENRSHNPVTKYF*TWSLGN
Trigger: ATTCCCCAATGACCAGGTCAAGAAATACTTCGTTAC...TGGATTATGGGAGCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5
CDS CCA 72 bp CGGCACGATCCGTTGGGCCGCCCAAGCTGCACCGCCTaGACCTGCGCTTGCCTGGAAAGCGAGGCCCCGCCC +
Preference number: 6 (lower is better)
Translates to: RHDPLGRPSCTA*TCACLESEAPP
Trigger: GGGCGGGGCCTCGCTTTCCAGGCAAGCGCAGGTCCAGGCGGTGCAGCTTGGGCGGCCCAACGGATCGTGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376770.5
ENST00000425796.5
CDS CAA 90 bp TGGACACCCTCCTGTAGCTGCGCTCGGCCGCCGCGGCACGATCCGTaGGGCCGCCCAAGCTGCACCGCCTGGACCTGCGCTTGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: WTPSCSCARPPRHDP*GRPSCTAWTCACLE
Trigger: TTCCAGGCAAGCGCAGGTCCAGGCGGTGCAGCTTGGGCGGCCCAACGGATCGTGCCGCGGCGGCCGAGCGCAGCTACAGGAGGGTGTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251547.10
CDS TCA 72 bp CACCCTCCTGTAGCTTTCCCAGCCTCCTCGGTCCGCTaGGGAACCCGCAGCCCCGGGCCTCGAGCAGACTGC +
Preference number: 6 (lower is better)
Translates to: HPPVAFPASSVR*GTRSPGPRADC
Trigger: GCAGTCTGCTCGAGGCCCGGGGCTGCGGGTTCCTCAGCGGACCGAGGAGGCTGGGAAAGCTACAGGAGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251546.8
CDS CCA 72 bp GCATCGCTCTTCTGCTGGATGGTCGCCGGGTCTGGCTaGAAGGTCCCCAGAGGCGCGTGCGCGGACGACAGG +
Preference number: 6 (lower is better)
Translates to: ASLFCWMVAGSG*KVPRGACADDR
Trigger: CCTGTCGTCCGCGCACGCGCCTCTGGGGACCTTCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376760.5
ENST00000376762.8
ENST00000376768.5
ENST00000376770.5
ENST00000425796.5
ENST00000471895.1
ENST00000475435.5
CDS CCA 72 bp CTTGGCATCGCTCTTCTGCTGGATGGTCGCCGGGTCTaGCTGGAAGGTCCCCAGAGGCGCGTGCGCGGACGA +
Preference number: 6 (lower is better)
Translates to: LGIALLLDGRRV*LEGPQRRVRGR
Trigger: TCGTCCGCGCACGCGCCTCTGGGGACCTTCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376760.5
ENST00000376762.8
ENST00000376768.5
ENST00000376770.5
ENST00000425796.5
ENST00000471895.1
ENST00000475435.5
CDS TCA 72 bp AAGGTCCCCAGAGGCGCGTGCGCGGACGACAGGAGCTaGACGCACAGCTGGTACTTGGACCCGCAATCTGGC +
Preference number: 6 (lower is better)
Translates to: KVPRGACADDRS*THSWYLDPQSG
Trigger: GCCAGATTGCGGGTCCAAGTACCAGCTGTGCGTTCAGCTCCTGTCGTCCGCGCACGCGCCTCTGGGGACCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376760.5
ENST00000376762.8
ENST00000376768.5
ENST00000376770.5
ENST00000425796.5
ENST00000471895.1
ENST00000475435.5
CDS GCA 72 bp GTGTGGGAGACCTCCCTCCACTTGGCATCGCTCTTCTaGTGGATGGTCGCCGGGTCTGGCTGGAAGGTCCCC +
Preference number: 6 (lower is better)
Translates to: VWETSLHLASLF*WMVAGSGWKVP
Trigger: GGGGACCTTCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCTCCCACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376760.5
ENST00000376762.8
ENST00000376768.5
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS CCA 72 bp AGACCTCCCTCCACTTGGCATCGCTCTTCTGCTGGATaGTCGCCGGGTCTGGCTGGAAGGTCCCCAGAGGCG +
Preference number: 6 (lower is better)
Translates to: RPPSTWHRSSAG*SPGLAGRSPEA
Trigger: CGCCTCTGGGGACCTTCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376760.5
ENST00000376762.8
ENST00000376768.5
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS CCA 72 bp TCGTTGATGTTCCCCACAGCCATGGCTTGTGGCTTCTaGACACCCTCCTGTAGCTGCGCTCGGCCGCCGCGG +
Preference number: 6 (lower is better)
Translates to: SLMFPTAMACGF*TPSCSCARPPR
Trigger: CCGCGGCGGCCGAGCGCAGCTACAGGAGGGTGTCCAGAAGCCACAAGCCATGGCTGTGGGGAACATCAACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251547.10
ENST00000376762.8
ENST00000376768.5
CDS CCA 72 bp GCGCGGACGACAGGAGCTGAACGCACAGCTGGTACTTaGACCCGCAATCTGGCCTGGCTGCGAACCTGGTCA +
Preference number: 6 (lower is better)
Translates to: ARTTGAERTAGT*TRNLAWLRTWS
Trigger: TGACCAGGTTCGCAGCCAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCGTTCAGCTCCTGTCGTCCGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251546.8
ENST00000376760.5
ENST00000376762.8
ENST00000425796.5
ENST00000475435.5
CDS CCA 72 bp TGGGAGACCTCCCTCCACTTGGCATCGCTCTTCTGCTaGATGGTCGCCGGGTCTGGCTGGAAGGTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: WETSLHLASLFC*MVAGSGWKVPR
Trigger: TCTGGGGACCTTCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251546.8
ENST00000251547.10
ENST00000376760.5
ENST00000376762.8
ENST00000376768.5
ENST00000376770.5
ENST00000471895.1
ENST00000475435.5
CDS CCA 72 bp GCGCGGACGACAGGAGCTGAACGCACAGCTGGTACTTaGACCCGCAATCTGGCCTGGCTGCGAACCAGTCCT +
Preference number: 6 (lower is better)
Translates to: ARTTGAERTAGT*TRNLAWLRTSP
Trigger: AGGACTGGTTCGCAGCCAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCGTTCAGCTCCTGTCGTCCGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376768.5
ENST00000376770.5
ENST00000471895.1
CDS CCA 72 bp GGCTTCTGGACACCCTCCTGTAGCTCCAGGGGTCACTaGGGCGGTCCAAGGAGCTTGGGACACATCAGGTAC +
Preference number: 6 (lower is better)
Translates to: GFWTPSCSSRGH*GGPRSLGHIRY
Trigger: GTACCTGATGTGTCCCAAGCTCCTTGGACCGCCCCAGTGACCCCTGGAGCTACAGGAGGGTGTCCAGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376770.5
ENST00000425796.5
CDS CCA 72 bp GAGCTGAACGCACAGCTGGTACTTGGACCCGCAATCTaGCCTGGCTGCGAACCAGTCCTTGACCTCGATGTC +
Preference number: 6 (lower is better)
Translates to: ELNAQLVLGPAI*PGCEPVLDLDV
Trigger: GACATCGAGGTCAAGGACTGGTTCGCAGCCAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCGTTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251547.10
ENST00000376768.5
ENST00000376770.5
ENST00000471895.1
CDS CCA 72 bp GAGCTGAACGCACAGCTGGTACTTGGACCCGCAATCTaGCCTGGCTGCGAACCTGGTCATTGGGGAATTCCT +
Preference number: 6 (lower is better)
Translates to: ELNAQLVLGPAI*PGCEPGHWGIP
Trigger: AGGAATTCCCCAATGACCAGGTTCGCAGCCAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCGTTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251546.8
ENST00000376760.5
ENST00000376762.8
ENST00000425796.5
ENST00000475435.5
CDS CAA 72 bp CAATACCCTTCGGCCTTGAGGTCCACCACCTGGGACTaGAGGCAGGTGCTGGTCATTGGGGAATTCCTTCCT +
Preference number: 6 (lower is better)
Translates to: QYPSALRSTTWD*RQVLVIGEFLP
Trigger: AGGAAGGAATTCCCCAATGACCAGCACCTGCCTCAAGTCCCAGGTGGTGGACCTCAAGGCCGAAGGGTATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376768.5
CDS CCA 72 bp TGGCTGCGAACCTGGTCATTGGGGAATTCCTTCCTCTaGTCTCGAGAGAGATCCTCCACCTTCCACTCATCG +
Preference number: 6 (lower is better)
Translates to: WLRTWSLGNSFL*SRERSSTFHSS
Trigger: CGATGAGTGGAAGGTGGAGGATCTCTCTCGAGACCAGAGGAAGGAATTCCCCAATGACCAGGTTCGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251546.8
ENST00000376760.5
ENST00000376762.8
ENST00000425796.5
ENST00000475435.5
CDS TCA 72 bp AATAAGGGCAGAGGGGGAAGAAGCCCGGATCTTCTTTaGTTCCAGGGCCAGCCTTTTTCAGTAGGCCAGTCT +
Preference number: 6 (lower is better)
Translates to: NKGRGGRSPDLL*FQGQPFSVGQS
Trigger: AGACTGGCCTACTGAAAAAGGCTGGCCCTGGAATCAAAGAAGATCCGGGCTTCTTCCCCCTCTGCCCTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376770.5
ENST00000425796.5
CDS CCA 72 bp TATTTCTTGACCTGGTCATTGGGGAATTCCTTCCTCTaGTCTCGAGAGAGATCCTCCACCTTCCACTCATCG +
Preference number: 6 (lower is better)
Translates to: YFLTWSLGNSFL*SRERSSTFHSS
Trigger: CGATGAGTGGAAGGTGGAGGATCTCTCTCGAGACCAGAGGAAGGAATTCCCCAATGACCAGGTCAAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251547.10
ENST00000376770.5