RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO41 (Homo sapiens)

Ensembl gene IDs: ENSG00000163013

Ensembl transcript IDs: ENST00000295133.9, ENST00000519873.1, ENST00000520186.1, ENST00000520530.3, ENST00000521871.5

Found 1067 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATGCTGGCAGTGGCAGAGGAGGCTTGGCCTCACGGTGGGGAGCCTaGCTGATTGTCAGGGCAGCCTTGGGACTGGCTGAGGTCCCAAGG +
Preference number: 1 (lower is better)
Translates to: HAGSGRGGLASRWGA*LIVRAALGLAEVPR
Trigger: CCTTGGGACCTCAGCCAGTCCCAAGGCTGCCCTGACAATCAGGCAGGCTCCCCACCGTGAGGCCAAGCCTCCTCTGCCACTGCCAGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp CTTACGGGTGACATGGAGCAAAGTGCTGGGATGGCGATGCCTGGGTaGGGCAGAGAAGTGTGGCCAGGGAAGGCCCCCTGGGGGCTGGAG +
Preference number: 1 (lower is better)
Translates to: LTGDMEQSAGMAMPG*GREVWPGKAPWGLE
Trigger: CTCCAGCCCCCAGGGGGCCTTCCCTGGCCACACTTCTCTGCCCCACCCAGGCATCGCCATCCCAGCACTTTGCTCCATGTCACCCGTAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR TCA 90 bp CTGGCAGTGGCAGAGGAGGCTTGGCCTCACGGTGGGGAGCCTGCCTaGTTGTCAGGGCAGCCTTGGGACTGGCTGAGGTCCCAAGGGTTT +
Preference number: 1 (lower is better)
Translates to: LAVAEEAWPHGGEPA*LSGQPWDWLRSQGF
Trigger: AAACCCTTGGGACCTCAGCCAGTCCCAAGGCTGCCCTGACAATCAGGCAGGCTCCCCACCGTGAGGCCAAGCCTCCTCTGCCACTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR TCA 90 bp CCTCAGGCCTCTGCCCTGGATACAAGACCCTTGTCAGGGCAGAGCTaGGGCTGGCAAGCCCAAGGCCAAGCCTCCCTTGGGCCATGCTGG +
Preference number: 1 (lower is better)
Translates to: PQASALDTRPLSGQS*GWQAQGQASLGPCW
Trigger: CCAGCATGGCCCAAGGGAGGCTTGGCCTTGGGCTTGCCAGCCTCAGCTCTGCCCTGACAAGGGTCTTGTATCCAGGGCAGAGGCCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp GAGGGCAGCTTCTGTCCAAGCCCCTGTACTGGGGAGGCAGTGCCCTaGGTCAGGCCTGTTGCTCTGCTGCTCCAGGAGGAGGACAGGAGA +
Preference number: 1 (lower is better)
Translates to: EGSFCPSPCTGEAVP*VRPVALLLQEEDRR
Trigger: TCTCCTGTCCTCCTCCTGGAGCAGCAGAGCAACAGGCCTGACCCAGGGCACTGCCTCCCCAGTACAGGGGCTTGGACAGAAGCTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR GCA 90 bp GCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTaGAGTTGGCAAGGCAGGACCAAGAAATCCAAGGCAGCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: AAPLVLGSQGAGATG*SWQGRTKKSKAARP
Trigger: GGGCCTGGCTGCCTTGGATTTCTTGGTCCTGCCTTGCCAACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp TGGGCCTCAGGAAGGAGAGGCCAGCCAGAACAGCTGAGGAGCCACTaGGTGGTTATTGCAGATCCTCCAGGTGATGACACCAGGCGCTGG +
Preference number: 1 (lower is better)
Translates to: WASGRRGQPEQLRSH*VVIADPPGDDTRRW
Trigger: CCAGCGCCTGGTGTCATCACCTGGAGGATCTGCAATAACCACCCAGTGGCTCCTCAGCTGTTCTGGCTGGCCTCTCCTTCCTGAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp GCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTaGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCC +
Preference number: 1 (lower is better)
Translates to: AMGAGCAAAPMGSQL*RTLYKVTWGRVFMS
Trigger: GGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR GCA 90 bp CTCTGGGGTAGGAGGCAAGGGGTGCCACACACAGCCAAGGCTTTGTaGAGGACTGGGCAGGGAGTTGCCAGCATGACACCCTTGGTATTT +
Preference number: 1 (lower is better)
Translates to: LWGRRQGVPHTAKAL*RTGQGVASMTPLVF
Trigger: AAATACCAAGGGTGTCATGCTGGCAACTCCCTGCCCAGTCCTGCACAAAGCCTTGGCTGTGTGTGGCACCCCTTGCCTCCTACCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp GCATCCCTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTaGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTGGC +
Preference number: 1 (lower is better)
Translates to: ASLCALSRRQGRQHL*FWGHREQELQGAVG
Trigger: GCCAACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAGGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR TCA 90 bp GGAAAAGTCAGCAATGATAGCAAAAGCTGGGACAGAGCTAGGGAGTaGCGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCA +
Preference number: 1 (lower is better)
Translates to: GKVSNDSKSWDRARE*RHGSWVCCCAHGIP
Trigger: TGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCGTCACTCCCTAGCTCTGTCCCAGCTTTTGCTATCATTGCTGACTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTaGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTGGCAAGGCA +
Preference number: 1 (lower is better)
Translates to: LCALSRRQGRQHLWF*GHREQELQGAVGKA
Trigger: TGCCTTGCCAACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp CTGATTGTCAGGGCAGCCTTGGGACTGGCTGAGGTCCCAAGGGTTTaGGGAGGGAGTCGTTGCCTTAGCTGGCCCTGGTATTCTGATCTT +
Preference number: 1 (lower is better)
Translates to: LIVRAALGLAEVPRV*GGSRCLSWPWYSDL
Trigger: AAGATCAGAATACCAGGGCCAGCTAAGGCAACGACTCCCTCCCCAAACCCTTGGGACCTCAGCCAGTCCCAAGGCTGCCCTGACAATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR TCA 90 bp TACACAGCAATATATACAGAAATGCAGGCCGGGCACAAGGCTGGGTaGGAAAGCATGGCCACTGGGTTGGAGAGAAGGGCCAGGCCCCCA +
Preference number: 1 (lower is better)
Translates to: YTAIYTEMQAGHKAG*ESMATGLERRARPP
Trigger: TGGGGGCCTGGCCCTTCTCTCCAACCCAGTGGCCATGCTTTCTCACCCAGCCTTGTGCCCGGCCTGCATTTCTGTATATATTGCTGTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR GCA 90 bp CCTCCCTCCCAGACAGCCTTGGTGACCCGAAGGCCATCGGGTTCCTaGCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAAC +
Preference number: 1 (lower is better)
Translates to: PPSQTALVTRRPSGS*PSTWIRRKFLKDRN
Trigger: GTTCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATGGCCTTCGGGTCACCAAGGCTGTCTGGGAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR GCA 90 bp GCCTTGGGACTGGCTGAGGTCCCAAGGGTTTGGGGAGGGAGTCGTTaGCTTAGCTGGCCCTGGTATTCTGATCTTTACCCAATCCTAAAC +
Preference number: 1 (lower is better)
Translates to: ALGLAEVPRVWGGSR*LSWPWYSDLYPILN
Trigger: GTTTAGGATTGGGTAAAGATCAGAATACCAGGGCCAGCTAAGGCAACGACTCCCTCCCCAAACCCTTGGGACCTCAGCCAGTCCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp GCGCCCATGGGATCCCAGCTCTGGAGGACTCTTTACAAGGTAACCTaGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTG +
Preference number: 1 (lower is better)
Translates to: APMGSQLWRTLYKVT*GRVFMSKPGCVRKL
Trigger: CAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGCTGGGATCCCATGGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp AAGGCTAGGGGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATaGAATACTCTGACCTCTCATTCTTGCTGCAAAGGATTGGGCCTG +
Preference number: 1 (lower is better)
Translates to: KARGHKSVSPRVRVQ*NTLTSHSCCKGLGL
Trigger: CAGGCCCAATCCTTTGCAGCAAGAATGAGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCCCCTAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp GTGTACCACCCAGAGAGAAGTTGCCTAGAGCCTTGTATTCAGGGATaGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTC +
Preference number: 1 (lower is better)
Translates to: VYHPERSCLEPCIQG*KVPGAEKILQLGRL
Trigger: GAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCCCTGAATACAAGGCTCTAGGCAACTTCTCTCTGGGTGGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp GGCTGGGACAGGTCCCATGGGTTCGAGTTAACTTCTCTGGGCATTTaGGCCTTACACCCACTCACCATCTCCTGTTTTTACCCCAAGTCC +
Preference number: 1 (lower is better)
Translates to: GWDRSHGFELTSLGI*ALHPLTISCFYPKS
Trigger: GGACTTGGGGTAAAAACAGGAGATGGTGAGTGGGTGTAAGGCCCAAATGCCCAGAGAAGTTAACTCGAACCCATGGGACCTGTCCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp ACAATACACAGCAATATATACAGAAATGCAGGCCGGGCACAAGGCTaGGTGAGAAAGCATGGCCACTGGGTTGGAGAGAAGGGCCAGGCC +
Preference number: 1 (lower is better)
Translates to: TIHSNIYRNAGRAQG*VRKHGHWVGEKGQA
Trigger: GGCCTGGCCCTTCTCTCCAACCCAGTGGCCATGCTTTCTCACCCAGCCTTGTGCCCGGCCTGCATTTCTGTATATATTGCTGTGTATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp ACATACACTCAGGTACATTCAGCAAAGGGCATCTTACGGGTGACATaGAGCAAAGTGCTGGGATGGCGATGCCTGGGTGGGGCAGAGAAG +
Preference number: 1 (lower is better)
Translates to: TYTQVHSAKGILRVT*SKVLGWRCLGGAEK
Trigger: CTTCTCTGCCCCACCCAGGCATCGCCATCCCAGCACTTTGCTCCATGTCACCCGTAAGATGCCCTTTGCTGAATGTACCTGAGTGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR TCA 90 bp GTTCTGAGACCTGATCCTTTGGGGACTGCAAAGGCCAGTGAAAAGTaGATCCTGTGGCTTCTAAGCCAAGTGGCTCCAGCTCAGGTCCAG +
Preference number: 1 (lower is better)
Translates to: VLRPDPLGTAKASEK*ILWLLSQVAPAQVQ
Trigger: CTGGACCTGAGCTGGAGCCACTTGGCTTAGAAGCCACAGGATTCACTTTTCACTGGCCTTTGCAGTCCCCAAAGGATCAGGTCTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR GCA 90 bp CCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTCATTCTTGCTaGAAAGGATTGGGCCTGCTCACACACATCCTTCACACACAGCCA +
Preference number: 1 (lower is better)
Translates to: PRVRVQWNTLTSHSC*KGLGLLTHILHTQP
Trigger: TGGCTGTGTGTGAAGGATGTGTGTGAGCAGGCCCAATCCTTTGCAGCAAGAATGAGAGGTCAGAGTATTCCATTGCACACGCACCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR GCA 90 bp AGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTCATTCTTaGTGCAAAGGATTGGGCCTGCTCACACACATCCTTCACACACAG +
Preference number: 1 (lower is better)
Translates to: SPRVRVQWNTLTSHS*CKGLGLLTHILHTQ
Trigger: CTGTGTGTGAAGGATGTGTGTGAGCAGGCCCAATCCTTTGCAGCAAGAATGAGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp GTATTCAGGGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTaGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTTTGTCTA +
Preference number: 1 (lower is better)
Translates to: VFRDGRSLGQRKSFS*AGSSQAGHPFVLCL
Trigger: TAGACAAAGCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCCCTGAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp AGAGAGAAGTTGCCTAGAGCCTTGTATTCAGGGATGGAAGGTCCCTaGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAG +
Preference number: 1 (lower is better)
Translates to: REKLPRALYSGMEGP*GRENPSVGQAQAKQ
Trigger: CTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCCCTGAATACAAGGCTCTAGGCAACTTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp AGGAAGTTACACTCATCAGGGACTGACAGGCTGGGACAGGTCCCATaGGTTCGAGTTAACTTCTCTGGGCATTTGGGCCTTACACCCACT +
Preference number: 1 (lower is better)
Translates to: RKLHSSGTDRLGQVP*VRVNFSGHLGLTPT
Trigger: AGTGGGTGTAAGGCCCAAATGCCCAGAGAAGTTAACTCGAACCCATGGGACCTGTCCCAGCCTGTCAGTCCCTGATGAGTGTAACTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp CTGGCTGAGGTCCCAAGGGTTTGGGGAGGGAGTCGTTGCCTTAGCTaGCCCTGGTATTCTGATCTTTACCCAATCCTAAACCTTATCCTC +
Preference number: 1 (lower is better)
Translates to: LAEVPRVWGGSRCLS*PWYSDLYPILNLIL
Trigger: GAGGATAAGGTTTAGGATTGGGTAAAGATCAGAATACCAGGGCCAGCTAAGGCAACGACTCCCTCCCCAAACCCTTGGGACCTCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp CACCCACTCACCATCTCCTGTTTTTACCCCAAGTCCAACAGGAACTaGGACTTTGGCACCAATAGTCACTCTGGGAAGGCCTCCTTCAAC +
Preference number: 1 (lower is better)
Translates to: HPLTISCFYPKSNRN*DFGTNSHSGKASFN
Trigger: GTTGAAGGAGGCCTTCCCAGAGTGACTATTGGTGCCAAAGTCCCAGTTCCTGTTGGACTTGGGGTAAAAACAGGAGATGGTGAGTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp GAGGTCCCAAGGGTTTGGGGAGGGAGTCGTTGCCTTAGCTGGCCCTaGTATTCTGATCTTTACCCAATCCTAAACCTTATCCTCAGGCAA +
Preference number: 1 (lower is better)
Translates to: EVPRVWGGSRCLSWP*YSDLYPILNLILRQ
Trigger: TTGCCTGAGGATAAGGTTTAGGATTGGGTAAAGATCAGAATACCAGGGCCAGCTAAGGCAACGACTCCCTCCCCAAACCCTTGGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp TCTTGCATCTTACTGGGTATGAGATGTGAAGGGATCCCGTTTGGGTaGGTAAAGATGGATGAAGTGCTTCTAGGGATAGCCAGGCCCTCT +
Preference number: 1 (lower is better)
Translates to: SCILLGMRCEGIPFG*VKMDEVLLGIARPS
Trigger: AGAGGGCCTGGCTATCCCTAGAAGCACTTCATCCATCTTTACCCACCCAAACGGGATCCCTTCACATCTCATACCCAGTAAGATGCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR TCA 90 bp TATAAGTGCACCTTCATTTCCTGCCGGTGCTGTGGGGAAGCAGCCTaGATAAAGCATGAAGTACTTAAGCCAAGTACACCAACCTCCCAG +
Preference number: 1 (lower is better)
Translates to: YKCTFISCRCCGEAA*IKHEVLKPSTPTSQ
Trigger: CTGGGAGGTTGGTGTACTTGGCTTAAGTACTTCATGCTTTATTCAGGCTGCTTCCCCACAGCACCGGCAGGAAATGAAGGTGCACTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 90 bp GATAGATCTAGTTTAGATGTTCGAAAGAACTTTCCAAATGAAAGTTaGCAGGACCCCCGGCCTCTGAGCTACTGTGGGAGTTCTGAGAGG +
Preference number: 1 (lower is better)
Translates to: DRSSLDVRKNFPNES*QDPRPLSYCGSSER
Trigger: CCTCTCAGAACTCCCACAGTAGCTCAGAGGCCGGGGGTCCTGCCAACTTTCATTTGGAAAGTTCTTTCGAACATCTAAACTAGATCTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGAGGTCCAAAGAGAGTaGCCTGGTGTGGGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDEVQRE*PGVGLA
Trigger: TGCCAGCCCCACACCAGGGCACTCTCTTTGGACCTC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGCTCCTCACTGGCTGTaGCAGAGGCTACTCCAGCCG +
Preference number: 2 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAAPHWL*QRLLQP
Trigger: CGGCTGGAGTAGCCTCTGGCACAGCCAGTGAGGAGC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACTGTGGATCCACAGCCTaGGCAGGCTGTCTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDCGSTA*AGCLKG
Trigger: CCCCTTCAGACAGCCTGCCCAGGCTGTGGATCCACA...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGGCCCCAGATGCTCCTaGCCAGGAGGCTGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSGPRCS*PGGWAS
Trigger: TGAGGCCCAGCCTCCTGGTCAGGAGCATCTGGGGCC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACAACTACTTCTCACTGTaGCAGGGCTGCCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDNYFSL*QGCLGL
Trigger: CAGCCCCAGGCAGCCCTGTCACAGTGAGAAGTAGTT...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGAGGTCCAAAGAGAGTaGCCTGGTGTGGGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAEVQRE*PGVGLA
Trigger: TGCCAGCCCCACACCAGGGCACTCTCTTTGGACCTC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGTGCCCCCAGAAGGCTaGAGCAAGGTTGAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDVPPEG*SKVEEK
Trigger: CTTCTCCTCAACCTTGCTGCAGCCTTCTGGGGGCAC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCATGGGAGCTGGGTGTaGTGCTGCGCCCATGGGATC +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPHGSWV*CCAHGI
Trigger: GATCCCATGGGCGCAGCAGCACACCCAGCTCCCATG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAGAGAGTGCCCTGGTGTaGGGCTGGCAGGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPESALV*GWQGPC
Trigger: GCAGGGCCCCTGCCAGCCCCACACCAGGGCACTCTC...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCGAGAGTGCCCTGGTGTaGGGCTGGCAGGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPESALV*GWQGPC
Trigger: GCAGGGCCCCTGCCAGCCCCACACCAGGGCACTCTC...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCTGTGACAGGGCTGCCTaGGGCTGGGACCTTGACCCT +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPCDRAA*GWDLDP
Trigger: AGGGTCAAGGTCCCAGCCCCAGGCAGCCCTGTCACA...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGGCCCCAGATGCTCCTaGCCAGGAGGCTGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWGPRCS*PGGWAS
Trigger: TGAGGCCCAGCCTCCTGGTCAGGAGCATCTGGGGCC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGAGGTCCAAAGAGAGTaGCCTGGTGTGGGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPEVQRE*PGVGLA
Trigger: TGCCAGCCCCACACCAGGGCACTCTCTTTGGACCTC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCTGGGTCAGGCCTGTTaGTCTGCTGCTCCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPLGQAC*SAAPGG
Trigger: TCCTCCTGGAGCAGCAGAGCAACAGGCCTGACCCAG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATAGGGCTGCCTGGGGCTaGGACCTTGACCCTCTGGAG +
Preference number: 2 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDRAAWG*DLDPLE
Trigger: CTCCAGAGGGTCAAGGTCCCAGCCCCAGGCAGCCCT...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGCAGGGAGAAGCCAATaGAGCCAGCTGCTCTGGGGT +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPAGRSQ*SQLLWG
Trigger: ACCCCAGAGCAGCTGGCTCCATTGGCTTCTCCCTGC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGCGTCAAGGGGCTGGTaGGGCAGGGGCTGCAAAGCT +
Preference number: 2 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDASRGW*GRGCKA
Trigger: AGCTTTGCAGCCCCTGCCCCACCAGCCCCTTGACGC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CAA 90 bp GGGTCAGGCCTGTTGCTCTGCTGCTCCAGGAGGAGGACAGGAGACTaGACAGTCCCCCTCCAGAAGCCAGGGATAACACTCGGCCTCCAA +
Preference number: 2 (lower is better)
Translates to: GSGLLLCCSRRRTGD*TVPLQKPGITLGLQ
Trigger: TTGGAGGCCGAGTGTTATCCCTGGCTTCTGGAGGGGGACTGTCAAGTCTCCTGTCCTCCTCCTGGAGCAGCAGAGCAACAGGCCTGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCAAACCAGGGTCCCTCTaGGGTCCAAAGAGAGTGCCC +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPKPGSL*GPKRVP
Trigger: GGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTT...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACCTTGGTTCTGAGACCTaGTCCTTTGGGGACTGCAAA +
Preference number: 2 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDLGSET*SFGDCK
Trigger: TTTGCAGTCCCCAAAGGATCAGGTCTCAGAACCAAG...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCTGTGCTGCTTTTTCCTaGCCCCTGAGGACAGGGCTG +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPCAAFS*PLRTGL
Trigger: CAGCCCTGTCCTCAGGGGTCAGGAAAAAGCAGCACA...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGTGCTTGGGCATGCATaGAGGCTAGGGGGCACAAGT +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPVLGHA*RLGGTS
Trigger: ACTTGTGCCCCCTAGCCTTCATGCATGCCCAAGCAC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGGCTGTCTGAAGGGGTaGCCCCAGAAGGCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDGCLKG*PQKAAA
Trigger: TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGGGAGCTGGGTGTGCTaGTGCGCCCATGGGATCCCA +
Preference number: 2 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRGSWVC*CAHGIP
Trigger: TGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGTAGGAGGCAAGGGGTaGCACACACAGCCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPVGGKG*HTQPRL
Trigger: AAGCCTTGGCTGTGTGTGGCACCCCTTGCCTCCTAC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCAGGGGCTGCAAAGCTaGCAGTGCTTGGGCATGCAT +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPQGLQS*QCLGMH
Trigger: ATGCATGCCCAAGCACTGGCAGCTTTGCAGCCCCTG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATGAGAGTGCCCTGGTGTaGGGCTGGCAGGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDESALV*GWQGPC
Trigger: GCAGGGCCCCTGCCAGCCCCACACCAGGGCACTCTC...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTGCTGCCCCCAGCTTTTaGCTGACCACGTGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSAAPSF*LTTCPG
Trigger: GCCTGGGCACGTGGTCAGCCAAAAGCTGGGGGCAGC...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGCCCAGACAGCCTTGGTaGCCCGAAGGCCATCGGGTT +
Preference number: 2 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRPRQPW*PEGHRV
Trigger: AACCCGATGGCCTTCGGGTCACCAAGGCTGTCTGGG...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGACAGAGCTAGGGAGTaGCGCCATGGGAGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRDRARE*RHGSWV
Trigger: CACCCAGCTCCCATGGCGTCACTCCCTAGCTCTGTC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGGGAGCTGGGTGTGCTaGTGCGCCCATGGGATCCCA +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLGSWVC*CAHGIP
Trigger: TGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGCATGGGAGCTGGGTGTaGTGCTGCGCCCATGGGATC +
Preference number: 2 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRHGSWV*CCAHGI
Trigger: GATCCCATGGGCGCAGCAGCACACCCAGCTCCCATG...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGCAGGAGCTACAGGGTaGAGTTGGCAAGGCAGGACC +
Preference number: 2 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDAGATG*SWQGRT
Trigger: GGTCCTGCCTTGCCAACTGCACCCTGTAGCTCCTGC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCTGCAAAGCTGCCAGTaGTTGGGCATGCATGAAGGC +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPLQSCQ*LGMHEG
Trigger: GCCTTCATGCATGCCCAAGCACTGGCAGCTTTGCAG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCCAAAGAGAGTGCCCTaGTGTGGGGCTGGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHPKRVP*CGAGRG
Trigger: GCCCCTGCCAGCCCCACACCAGGGCACTCTCTTTGG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTACCCCCAGGAAATGTaGATCCACAGCCTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSYPQEM*IHSLGR
Trigger: CCTGCCCAGGCTGTGGATCCACATTTCCTGGGGGTA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACAGGGCTGCCTGGGGCTaGGACCTTGACCCTCTGGAG +
Preference number: 2 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHRAAWG*DLDPLE
Trigger: CTCCAGAGGGTCAAGGTCCCAGCCCCAGGCAGCCCT...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTAGTCCACGGGGCCCGTaGAGACCAAGGAAGGGGGAG +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLSPRGP*RPRKGE
Trigger: CTCCCCCTTCCTTGGTCTCCACGGGCCCCGTGGACT...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGTCCCTGGGAAGGACTaGGTAACGAGGGGACCCCAT +
Preference number: 2 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDVPGKD*VTRGPH
Trigger: ATGGGGTCCCCTCGTTACCCAGTCCTTCCCAGGGAC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTGTGCTGCTGCGCCCATaGGATCCCAGCTCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSVLLRP*DPSSGG
Trigger: TCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCAC...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAGTGCTGCTGCGCCCATaGGATCCCAGCTCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPVLLRP*DPSSGG
Trigger: TCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCAC...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGTGGAGCCAGCTGCTCTaGGGTAGGAGGCAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRWSQLL*GRRQGV
Trigger: CACCCCTTGCCTCCTACCCCAGAGCAGCTGGCTCCA...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CAA 90 bp ACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTaGGCAAGGCAGGACCAAGAAATCCAAGGCAGCCAGGCCCTTACT +
Preference number: 2 (lower is better)
Translates to: TSGSGVTGSRSYRVQ*ARQDQEIQGSQALT
Trigger: AGTAAGGGCCTGGCTGCCTTGGATTTCTTGGTCCTGCCTTGCCAACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGGAGGACAGGAGACTTaGCAGTCCCCCTCCAGAAGC +
Preference number: 2 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWGGQET*QSPSRS
Trigger: GCTTCTGGAGGGGGACTGTCAAGTCTCCTGTCCTCC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGGCCCCAGATGCTCCTaGCCAGGAGGCTGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTGPRCS*PGGWAS
Trigger: TGAGGCCCAGCCTCCTGGTCAGGAGCATCTGGGGCC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCTTGGAGCCTTGGTTCTaGGACCTGATCCTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPLEPWF*DLILWG
Trigger: TCCCCAAAGGATCAGGTCTCAGAACCAAGGCTCCAA...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGACAGAGCTAGGGAGTaGCGCCATGGGAGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLDRARE*RHGSWV
Trigger: CACCCAGCTCCCATGGCGTCACTCCCTAGCTCTGTC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATTGTGCTGCTTTTTCCTaGCCCCTGAGGACAGGGCTG +
Preference number: 2 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDCAAFS*PLRTGL
Trigger: CAGCCCTGTCCTCAGGGGTCAGGAAAAAGCAGCACA...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACGCTCCTCACTGGCTGTaGCAGAGGCTACTCCAGCCG +
Preference number: 2 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHAPHWL*QRLLQP
Trigger: CGGCTGGAGTAGCCTCTGGCACAGCCAGTGAGGAGC...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACGGCTGTCTGAAGGGGTaGCCCCAGAAGGCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHGCLKG*PQKAAA
Trigger: TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCC...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCCCAAAGAGAGTGCCCTaGTGTGGGGCTGGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCPKRVP*CGAGRG
Trigger: GCCCCTGCCAGCCCCACACCAGGGCACTCTCTTTGG...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATTACCCCCAGGAAATGTaGATCCACAGCCTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDYPQEM*IHSLGR
Trigger: CCTGCCCAGGCTGTGGATCCACATTTCCTGGGGGTA...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATGCTGCCCCCAGCTTTTaGCTGACCACGTGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDAAPSF*LTTCPG
Trigger: GCCTGGGCACGTGGTCAGCCAAAAGCTGGGGGCAGC...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGCTGCCCCCAGCTTTTaGCTGACCACGTGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCAAPSF*LTTCPG
Trigger: GCCTGGGCACGTGGTCAGCCAAAAGCTGGGGGCAGC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTAGGGTGGTCTCATCCTaGGGAGAAGTTCTGGGTGAC +
Preference number: 2 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSRVVSS*GEVLGD
Trigger: GTCACCCAGAACTTCTCCCCAGGATGAGACCACCCT...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CAA 90 bp CTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTTaGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCAC +
Preference number: 2 (lower is better)
Translates to: LQLGRLKPSRASLCA*SRRQGRQHLWFWGH
Trigger: GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACGCCAGCCAGAACAGCTaGGGAGCCACTGGGTGGTTA +
Preference number: 2 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHASQNS*GATGWL
Trigger: TAACCACCCAGTGGCTCCTCAGCTGTTCTGGCTGGC...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATCCCAGACAGCCTTGGTaGCCCGAAGGCCATCGGGTT +
Preference number: 2 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDPRQPW*PEGHRV
Trigger: AACCCGATGGCCTTCGGGTCACCAAGGCTGTCTGGG...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAGGACCCCCGGCCTCTaGGCTACTGTGGGAGTTCTG +
Preference number: 2 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCRTPGL*ATVGVL
Trigger: CAGAACTCCCACAGTAGCTCAGAGGCCGGGGGTCCT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGCTAGGGCTGGGAGCTaGTCCTATCTAGGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSARAGS*SYLGEK
Trigger: TTTCTCTCCTAGATAGGATCAGCTCCCAGCCCTAGC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGACAGAGCTAGGGAGTaGCGCCATGGGAGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCDRARE*RHGSWV
Trigger: CACCCAGCTCCCATGGCGTCACTCCCTAGCTCTGTC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCAGGGAGTTGCCAGCATaGCACCCTTGGTATTTTAGG +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPRELPA*HPWYFR
Trigger: CCTAAAATACCAAGGGTGTCATGCTGGCAACTCCCT...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCTTTTTCCTGACCCCTaGGGACAGGGCTGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHLFPDP*GQGWCR
Trigger: CCTGCACCAGCCCTGTCCTCAGGGGTCAGGAAAAAG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGCATCTTACTGGGTATaGGATGTGAAGGGATCCCGT +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPASYWV*DVKGSR
Trigger: ACGGGATCCCTTCACATCTCATACCCAGTAAGATGC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTGTGCCCCCAGAAGGCTaGAGCAAGGTTGAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSVPPEG*SKVEEK
Trigger: CTTCTCCTCAACCTTGCTGCAGCCTTCTGGGGGCAC...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCCTGGGGAGAAGTTCTaGGTGACTGTTTCCTTTCCA +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPPGEKF*VTVSFP
Trigger: TGGAAAGGAAACAGTCACCCAGAACTTCTCCCCAGG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGAGCTCTGGTGTGCGGTaGGGTATGAGGTTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRSSGVR*GMRLGG
Trigger: TCCTCCCAACCTCATACCCCACCGCACACCAGAGCT...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGAGCTCTGGTGTGCGGTaGGGTATGAGGTTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWSSGVR*GMRLGG
Trigger: TCCTCCCAACCTCATACCCCACCGCACACCAGAGCT...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTGTGACAGGGCTGCCTaGGGCTGGGACCTTGACCCT +
Preference number: 2 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCCDRAA*GWDLDP
Trigger: AGGGTCAAGGTCCCAGCCCCAGGCAGCCCTGTCACA...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTTTCCAAATGAAAGTTaGCAGGACCCCCGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSFPNES*QDPRPL
Trigger: CAGAGGCCGGGGGTCCTGCCAACTTTCATTTGGAAA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATTGGAGCCAGCTGCTCTaGGGTAGGAGGCAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDWSQLL*GRRQGV
Trigger: CACCCCTTGCCTCCTACCCCAGAGCAGCTGGCTCCA...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCCTTGTATTCAGGGATaGAAGGTCCCTGGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDPCIQG*KVPGAE
Trigger: CTCTGCCCCAGGGACCTTCCATCCCTGAATACAAGG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCAAACCAGGGTCCCTCTaGGGTCCAAAGAGAGTGCCC +
Preference number: 2 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAKPGSL*GPKRVP
Trigger: GGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTT...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATGGAGGACAGGAGACTTaGCAGTCCCCCTCCAGAAGC +
Preference number: 2 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDGGQET*QSPSRS
Trigger: GCTTCTGGAGGGGGACTGTCAAGTCTCCTGTCCTCC...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGCCAGCCAGAACAGCTaGGGAGCCACTGGGTGGTTA +
Preference number: 2 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCASQNS*GATGWL
Trigger: TAACCACCCAGTGGCTCCTCAGCTGTTCTGGCTGGC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACTACTGTGGGAGTTCTaGGAGGAGGAACTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPLLWEF*EEELGR
Trigger: TCTCCCCAGTTCCTCCTCTCAGAACTCCCACAGTAG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTAGGGAGTTGCCAGCATaGCACCCTTGGTATTTTAGG +
Preference number: 2 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSRELPA*HPWYFR
Trigger: CCTAAAATACCAAGGGTGTCATGCTGGCAACTCCCT...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATCTGGGTCAGGCCTGTTaGTCTGCTGCTCCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDLGQAC*SAAPGG
Trigger: TCCTCCTGGAGCAGCAGAGCAACAGGCCTGACCCAG...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGCTCCTCACTGGCTGTaGCAGAGGCTACTCCAGCCG +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTAPHWL*QRLLQP
Trigger: CGGCTGGAGTAGCCTCTGGCACAGCCAGTGAGGAGC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCATTGCCAAGTCTGAGCTaGCTTGTGGAGCCCCCATTG +
Preference number: 2 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPLPSLS*LVEPPL
Trigger: CAATGGGGGCTCCACAAGGCAGCTCAGACTTGGCAA...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGTGCCCCCAGAAGGCTaGAGCAAGGTTGAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLVPPEG*SKVEEK
Trigger: CTTCTCCTCAACCTTGCTGCAGCCTTCTGGGGGCAC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTAGGCCATCGGGTTCCTaGCCAAGCACCTGGATTAGA +
Preference number: 2 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSRPSGS*PSTWIR
Trigger: TCTAATCCAGGTGCTTGGGCAGGAACCCGATGGCCT...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGTAGGAGGCAAGGGGTaGCACACACAGCCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLVGGKG*HTQPRL
Trigger: AAGCCTTGGCTGTGTGTGGCACCCCTTGCCTCCTAC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATCCAAGCCCCTGTACTaGGGAGGCAGTGCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTSKPLY*GGSALG
Trigger: ACCCAGGGCACTGCCTCCCCAGTACAGGGGCTTGGA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCAGCTGAGGAGCCACTaGGTGGTTATTGCAGATCCT +
Preference number: 2 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDQLRSH*VVIADP
Trigger: AGGATCTGCAATAACCACCCAGTGGCTCCTCAGCTG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCTACCCCCAGGAAATGTaGATCCACAGCCTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAYPQEM*IHSLGR
Trigger: CCTGCCCAGGCTGTGGATCCACATTTCCTGGGGGTA...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACGGCAATCCCCCACCTTaGAAGGGTGGTCTCATCCTG +
Preference number: 2 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHGNPPP*KGGLIL
Trigger: CAGGATGAGACCACCCTTCCAAGGTGGGGGATTGCC...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGGCAATCCCCCACCTTaGAAGGGTGGTCTCATCCTG +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLGNPPP*KGGLIL
Trigger: CAGGATGAGACCACCCTTCCAAGGTGGGGGATTGCC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGGCAATCCCCCACCTTaGAAGGGTGGTCTCATCCTG +
Preference number: 2 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPGNPPP*KGGLIL
Trigger: CAGGATGAGACCACCCTTCCAAGGTGGGGGATTGCC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTTGTGACAGGGCTGCCTaGGGCTGGGACCTTGACCCT +
Preference number: 2 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLCDRAA*GWDLDP
Trigger: AGGGTCAAGGTCCCAGCCCCAGGCAGCCCTGTCACA...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAAAGCCACCCTCCTCCTaGCTTCCTCCACGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTKPPSS*LPPRPQ
Trigger: CTGAGGCCGTGGAGGAAGCCAGGAGGAGGGTGGCTT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAGGAGACCTCAGCCTTTaGAGCCTTGGTTCTGAGACC +
Preference number: 2 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPGDLSL*SLGSET
Trigger: GGTCTCAGAACCAAGGCTCCAAAGGCTGAGGTCTCC...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGGAGACCTCAGCCTTTaGAGCCTTGGTTCTGAGACC +
Preference number: 2 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWGDLSL*SLGSET
Trigger: GGTCTCAGAACCAAGGCTCCAAAGGCTGAGGTCTCC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGTCTGAGAGGAGGAACTaGGGAGACCTCAGCCTTTGG +
Preference number: 2 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRSERRN*GDLSLW
Trigger: CCAAAGGCTGAGGTCTCCCCAGTTCCTCCTCTCAGA...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCATCTGAGAGGAGGAACTaGGGAGACCTCAGCCTTTGG +
Preference number: 2 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPSERRN*GDLSLW
Trigger: CCAAAGGCTGAGGTCTCCCCAGTTCCTCCTCTCAGA...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCATGGGATCCCAGCTCTaGAGGACTCTTTACAAGGTA +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPMGSQL*RTLYKV
Trigger: TACCTTGTAAAGAGTCCTCCAGAGCTGGGATCCCAT...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACGGCTTTGTGCAGGACTaGGCAGGGAGTTGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHGFVQD*AGSCQH
Trigger: ATGCTGGCAACTCCCTGCCCAGTCCTGCACAAAGCC...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATTCCCTTCCAGGCCTCTaGAGGAGAGGAAAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDSLPGL*RRGKKA
Trigger: AGCTTTCTTTCCTCTCCTCCAGAGGCCTGGAAGGGA...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTACAGCCAGAACAGGGTaGAGGACTGAGGGGCTTTCC +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLTARTG*RTEGLS
Trigger: GGAAAGCCCCTCAGTCCTCCACCCTGTTCTGGCTGT...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CAA 90 bp TGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGGAGCTGCCTaGATCCTTAGGTGGTCTCTCCTGGCTGGGGAAAGGCTGTGGTGC +
Preference number: 2 (lower is better)
Translates to: WLRLECHRTKKTGAA*ILRWSLLAGERLWC
Trigger: GCACCACAGCCTTTCCCCAGCCAGGAGAGACCACCTAAGGATCAAGGCAGCTCCTGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGACTGCAAAGGCCAGTaGAAAGTGAATCCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDDCKGQ*KVNPVA
Trigger: AGCCACAGGATTCACTTTTCACTGGCCTTTGCAGTC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCTACTGTGGGAGTTCTaGGAGGAGGAACTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHLLWEF*EEELGR
Trigger: TCTCCCCAGTTCCTCCTCTCAGAACTCCCACAGTAG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCTAGGGCTGGGAGCTaGTCCTATCTAGGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRARAGS*SYLGEK
Trigger: TTTCTCTCCTAGATAGGATCAGCTCCCAGCCCTAGC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACACTTTTTCCTGACCCCTaGGGACAGGGCTGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTLFPDP*GQGWCR
Trigger: CCTGCACCAGCCCTGTCCTCAGGGGTCAGGAAAAAG...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATTCAGGCCTGTTGCTCTaGTGCTCCAGGAGGAGGACA +
Preference number: 2 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDSGLLL*CSRRRT
Trigger: TGTCCTCCTCCTGGAGCAGCAGAGCAACAGGCCTGA...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACACTGGGTCAGGCCTGTTaGTCTGCTGCTCCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTLGQAC*SAAPGG
Trigger: TCCTCCTGGAGCAGCAGAGCAACAGGCCTGACCCAG...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTAGGCCATCGGGTTCCTaGCCAAGCACCTGGATTAGA +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLRPSGS*PSTWIR
Trigger: TCTAATCCAGGTGCTTGGGCAGGAACCCGATGGCCT...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCATGGGTCTGGCTCCCTaGCAAGGCCACATCTTCAAG +
Preference number: 2 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPMGLAP*QGHIFK
Trigger: CTTGAAGATGTGGCCTTGGCAGGGAGCCAGACCCAT...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTATGGGTCTGGCTCCCTaGCAAGGCCACATCTTCAAG +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLMGLAP*QGHIFK
Trigger: CTTGAAGATGTGGCCTTGGCAGGGAGCCAGACCCAT...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGACTGGGCAGGGAGTTaGCAGCATGACACCCTTGGT +
Preference number: 2 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCDWAGS*QHDTLG
Trigger: ACCAAGGGTGTCATGCTGGCAACTCCCTGCCCAGTC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGCAAAGGATTGGGCCTaGTCACACACATCCTTCACA +
Preference number: 2 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDAKDWA*SHTSFT
Trigger: TGTGAAGGATGTGTGTGAGCAGGCCCAATCCTTTGC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTTCCAAGCCCCTGTACTaGGGAGGCAGTGCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: SGGSLRNECRYRNVRLSASKPLY*GGSALG
Trigger: ACCCAGGGCACTGCCTCCCCAGTACAGGGGCTTGGA...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGTGACAGCTCCTCACTaGCTGTGCCAGAGGCTACTC +
Preference number: 2 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCVTAPH*LCQRLL
Trigger: GAGTAGCCTCTGGCACAGCCAGTGAGGAGCTGTCAC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCAGGGTGGTCTCATCCTaGGGAGAAGTTCTGGGTGAC +
Preference number: 2 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQARVVSS*GEVLGD
Trigger: GTCACCCAGAACTTCTCCCCAGGATGAGACCACCCT...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGGCTTTGTGCAGGACTaGGCAGGGAGTTGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCGFVQD*AGSCQH
Trigger: ATGCTGGCAACTCCCTGCCCAGTCCTGCACAAAGCC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGCAGGGAGAAGCCAATaGAGCCAGCTGCTCTGGGGT +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTAGRSQ*SQLLWG
Trigger: ACCCCAGAGCAGCTGGCTCCATTGGCTTCTCCCTGC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCTACAGGGTGCAGTTaGCAAGGCAGGACCAAGAAA +
Preference number: 2 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRATGCS*QGRTKK
Trigger: TTTCTTGGTCCTGCCTTGCCAACTGCACCCTGTAGC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGGAAGGCAGCACCTCTaGTTCTGGGGTCACAGGGAG +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTGRQHL*FWGHRE
Trigger: CTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTTCC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAAAACCAGGGTCCCTCTaGGGTCCAAAGAGAGTGCCC +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTKPGSL*GPKRVP
Trigger: GGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACTTGGTTCTGAGACCTaGTCCTTTGGGGACTGCAAA +
Preference number: 2 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPLGSET*SFGDCK
Trigger: TTTGCAGTCCCCAAAGGATCAGGTCTCAGAACCAAG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGTGACAGCTCCTCACTaGCTGTGCCAGAGGCTACTC +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTVTAPH*LCQRLL
Trigger: GAGTAGCCTCTGGCACAGCCAGTGAGGAGCTGTCAC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTCAGCTGAGGAGCCACTaGGTGGTTATTGCAGATCCT +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLQLRSH*VVIADP
Trigger: AGGATCTGCAATAACCACCCAGTGGCTCCTCAGCTG...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTTGTGGATCCACAGCCTaGGCAGGCTGTCTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: SGGSLRNECRYRNVRLSACGSTA*AGCLKG
Trigger: CCCCTTCAGACAGCCTGCCCAGGCTGTGGATCCACA...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAGGAAGTTGGGTCCCTaGGAAGGACTGGGTAACGAG +
Preference number: 2 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCRKLGP*EGLGNE
Trigger: CTCGTTACCCAGTCCTTCCCAGGGACCCAACTTCCT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CAA 90 bp TGTATTCAGGGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTaGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTTTGTCT +
Preference number: 2 (lower is better)
Translates to: CIQGWKVPGAEKILQ*GRLKPSRASLCALS
Trigger: AGACAAAGCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCCCTGAATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CAA 90 bp AGGCTGGGACAGGTCCCATGGGTTCGAGTTAACTTCTCTGGGCATTaGGGCCTTACACCCACTCACCATCTCCTGTTTTTACCCCAAGTC +
Preference number: 2 (lower is better)
Translates to: RLGQVPWVRVNFSGH*GLTPTHHLLFLPQV
Trigger: GACTTGGGGTAAAAACAGGAGATGGTGAGTGGGTGTAAGGCCCAAATGCCCAGAGAAGTTAACTCGAACCCATGGGACCTGTCCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGCATCTTACTGGGTATaGGATGTGAAGGGATCCCGT +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLASYWV*DVKGSR
Trigger: ACGGGATCCCTTCACATCTCATACCCAGTAAGATGC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGATCAGGCCTGTTGCTCTaGTGCTCCAGGAGGAGGACA +
Preference number: 2 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGSGLLL*CSRRRT
Trigger: TGTCCTCCTCCTGGAGCAGCAGAGCAACAGGCCTGA...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTGAAAGAAAGCTGTGCTaGTTTTTCCTGACCCCTGAG +
Preference number: 2 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSERKLC*FFLTPE
Trigger: CTCAGGGGTCAGGAAAAAGCAGCACAGCTTTCTTTC...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATGCACCTTCATTTCCTaGCGGTGCTGTGGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTCTFIS*RCCGEA
Trigger: TGCTTCCCCACAGCACCGGCAGGAAATGAAGGTGCA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCCCTGGGGAGAAGTTCTaGGTGACTGTTTCCTTTCCA +
Preference number: 2 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAPGEKF*VTVSFP
Trigger: TGGAAAGGAAACAGTCACCCAGAACTTCTCCCCAGG...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATTTTCCAAATGAAAGTTaGCAGGACCCCCGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDFPNES*QDPRPL
Trigger: CAGAGGCCGGGGGTCCTGCCAACTTTCATTTGGAAA...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTCTTTACAAGGTAACCTaGGGGAGGGTCTTCATGTCC +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLLYKVT*GRVFMS
Trigger: GGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAG...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCCTTGGTTCTGAGACCTaGTCCTTTGGGGACTGCAAA +
Preference number: 2 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCLGSET*SFGDCK
Trigger: TTTGCAGTCCCCAAAGGATCAGGTCTCAGAACCAAG...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCAAAGAACTTTCCAAATaGAAGTTGGCAGGACCCCCG +
Preference number: 2 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAKELSK*KLAGPP
Trigger: CGGGGGTCCTGCCAACTTTCATTTGGAAAGTTCTTT...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAACTGGGTATGAGATGTaGAGGGATCCCGTTTGGGTG +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTTGYEM*RDPVWV
Trigger: CACCCAAACGGGATCCCTTCACATCTCATACCCAGT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGAAAGAAAGCTGTGCTaGTTTTTCCTGACCCCTGAG +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLERKLC*FFLTPE
Trigger: CTCAGGGGTCAGGAAAAAGCAGCACAGCTTTCTTTC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCAGATATTCCTTTCTTaGATCTTACTGGGTATGAGA +
Preference number: 2 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPQIFLS*ILLGMR
Trigger: TCTCATACCCAGTAAGATGCAAGAAAGGAATATCTG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTTGGAGCAGGGCTGCTTaGTCTCAGATATTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLWSRAA*SQIFLS
Trigger: AGAAAGGAATATCTGAGAGCAAGCAGCCCTGCTCCA...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAAGGGTGGTCTCATCCTaGGGAGAAGTTCTGGGTGAC +
Preference number: 2 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGRVVSS*GEVLGD
Trigger: GTCACCCAGAACTTCTCCCCAGGATGAGACCACCCT...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCCTTTACAAGGTAACCTaGGGGAGGGTCTTCATGTCC +
Preference number: 2 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCLYKVT*GRVFMS
Trigger: GGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAG...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATTCCTGCCGGTGCTGTaGGGAAGCAGCCTGAATAAA +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTFLPVL*GSSLNK
Trigger: TTTATTCAGGCTGCTTCCCCACAGCACCGGCAGGAA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGACAGCTGAGGAGCCACTaGGTGGTTATTGCAGATCCT +
Preference number: 2 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGQLRSH*VVIADP
Trigger: AGGATCTGCAATAACCACCCAGTGGCTCCTCAGCTG...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTCCTGGGGAGAAGTTCTaGGTGACTGTTTCCTTTCCA +
Preference number: 2 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLPGEKF*VTVSFP
Trigger: TGGAAAGGAAACAGTCACCCAGAACTTCTCCCCAGG...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR TCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATTGCAATGGAATACTCTaGCCTCTCATTCTTGCTGCA +
Preference number: 2 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDCNGIL*PLILAA
Trigger: TGCAGCAAGAATGAGAGGTCAGAGTATTCCATTGCA...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATGGAGCAGGGCTGCTTaGTCTCAGATATTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTWSRAA*SQIFLS
Trigger: AGAAAGGAATATCTGAGAGCAAGCAGCCCTGCTCCA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAAGAAAATCCTTCAGTTaGGCAGGCTCAAGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTRKSFS*AGSSQA
Trigger: TGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAAGGGTGCGTGTGCAATaGAATACTCTGACCTCTCAT +
Preference number: 2 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTRVRVQ*NTLTSH
Trigger: ATGAGAGGTCAGAGTATTCCATTGCACACGCACCCT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR GCA 72 bp AGTGGCAGAGGAGGCTTGGCCTCACGGTGGGGAGCCTaGCTGATTGTCAGGGCAGCCTTGGGACTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: SGRGGLASRWGA*LIVRAALGLAE
Trigger: CTCAGCCAGTCCCAAGGCTGCCCTGACAATCAGGCAGGCTCCCCACCGTGAGGCCAAGCCTCCTCTGCCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCCCTCCCAGACAGCCTaGGTGACCCGAAGGCCATCG +
Preference number: 3 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPPSQTA*VTRRPS
Trigger: CGATGGCCTTCGGGTCACCAAGGCTGTCTGGGAGGG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp GCTGGTGCAGGGAGAAGCCAATGGAGCCAGCTGCTCTaGGGTAGGAGGCAAGGGGTGCCACACACAGCCAAG +
Preference number: 3 (lower is better)
Translates to: AGAGRSQWSQLL*GRRQGVPHTAK
Trigger: CTTGGCTGTGTGTGGCACCCCTTGCCTCCTACCCCAGAGCAGCTGGCTCCATTGGCTTCTCCCTGCACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCTGCTCTTCCTCTTCCTaGGCCCCATGGGTCTGGCTC +
Preference number: 3 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPCSSSS*APWVWL
Trigger: GAGCCAGACCCATGGGGCCAAGGAAGAGGAAGAGCA...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGGGGGAGTGAGTCTATaGAGGATGCTCTTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDGGVSL*RMLFLF
Trigger: GAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp GCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTaGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTC +
Preference number: 3 (lower is better)
Translates to: AGCAAAPMGSQL*RTLYKVTWGRV
Trigger: GACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp CCAGACTGGATGGCAGGGGGTGGTAGAAACACCAAGTaGCCACCCCCACTGGGCCTCTACACATACCTGGGG +
Preference number: 3 (lower is better)
Translates to: PDWMAGGGRNTK*PPPLGLYTYLG
Trigger: CCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACCACCCCCTGCCATCCAGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCTGGCAATCCCCCACCTaGGAAGGGTGGTCTCATCCT +
Preference number: 3 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPWQSPT*EGWSHP
Trigger: AGGATGAGACCACCCTTCCAAGGTGGGGGATTGCCA...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGCCCTCCCAGACAGCCTaGGTGACCCGAAGGCCATCG +
Preference number: 3 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWPSQTA*VTRRPS
Trigger: CGATGGCCTTCGGGTCACCAAGGCTGTCTGGGAGGG...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR TCA 72 bp GCTGGGCCTCAGGAAGGAGAGGCCAGCCAGAACAGCTaGGGAGCCACTGGGTGGTTATTGCAGATCCTCCAG +
Preference number: 3 (lower is better)
Translates to: AGPQEGEASQNS*GATGWLLQILQ
Trigger: CTGGAGGATCTGCAATAACCACCCAGTGGCTCCTCAGCTGTTCTGGCTGGCCTCTCCTTCCTGAGGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR GCA 72 bp TGTGGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTaGCCCCAGAAGGCTGCAGCAAGGTTGAGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: CGSTAWAGCLKG*PQKAAARLRRR
Trigger: TCTTCTCCTCAACCTTGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGCCACTGGGTGGTTATaGCAGATCCTCCAGGTGATG +
Preference number: 3 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPATGWL*QILQVM
Trigger: CATCACCTGGAGGATCTGCAATAACCACCCAGTGGC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp ATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTaGGAAGGACTGGGTAACGAGGGGACCCCATCCCCC +
Preference number: 3 (lower is better)
Translates to: MSKPGCVRKLGP*EGLGNEGTPSP
Trigger: GGGGGATGGGGTCCCCTCGTTACCCAGTCCTTCCCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGCCACTGGGTGGTTATaGCAGATCCTCCAGGTGATG +
Preference number: 3 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSATGWL*QILQVM
Trigger: CATCACCTGGAGGATCTGCAATAACCACCCAGTGGC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCCCCTCCCAGACAGCCTaGGTGACCCGAAGGCCATCG +
Preference number: 3 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCPSQTA*VTRRPS
Trigger: CGATGGCCTTCGGGTCACCAAGGCTGTCTGGGAGGG...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGCCACTGGGTGGTTATaGCAGATCCTCCAGGTGATG +
Preference number: 3 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDATGWL*QILQVM
Trigger: CATCACCTGGAGGATCTGCAATAACCACCCAGTGGC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGGAGAAGAGCCCTCCTaGCCAAGTCTGAGCTGCCTT +
Preference number: 3 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWGEEPS*PSLSCL
Trigger: AAGGCAGCTCAGACTTGGCAAGGAGGGCTCTTCTCC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGGGGGAGTGAGTCTATaGAGGATGCTCTTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSGGVSL*RMLFLF
Trigger: GAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCTGAGACCTGATCCTTaGGGGACTGCAAAGGCCAGT +
Preference number: 3 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDLRPDP*GTAKAS
Trigger: ACTGGCCTTTGCAGTCCCCAAAGGATCAGGTCTCAG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCTCTGACCTCTCATTCTaGCTGCAAAGGATTGGGCCT +
Preference number: 3 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPSDLSF*LQRIGP
Trigger: AGGCCCAATCCTTTGCAGCAAGAATGAGAGGTCAGA...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR GCA 72 bp CTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTaGAGTTGGCAAGGCAGGACCAAGAAATCCAAGGCA +
Preference number: 3 (lower is better)
Translates to: LVLGSQGAGATG*SWQGRTKKSKA
Trigger: TGCCTTGGATTTCTTGGTCCTGCCTTGCCAACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp TGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTaGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGT +
Preference number: 3 (lower is better)
Translates to: CALSRRQGRQHL*FWGHREQELQG
Trigger: ACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGGAGAAGAGCCCTCCTaGCCAAGTCTGAGCTGCCTT +
Preference number: 3 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPGEEPS*PSLSCL
Trigger: AAGGCAGCTCAGACTTGGCAAGGAGGGCTCTTCTCC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACTGGCAATCCCCCACCTaGGAAGGGTGGTCTCATCCT +
Preference number: 3 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHWQSPT*EGWSHP
Trigger: AGGATGAGACCACCCTTCCAAGGTGGGGGATTGCCA...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGTGCGCCTTTCAGCTTaGAATTTAGCTCTGGTGTGC +
Preference number: 3 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSVRLSA*NLALVC
Trigger: GCACACCAGAGCTAAATTCAAAGCTGAAAGGCGCAC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACTGAGACCTGATCCTTaGGGGACTGCAAAGGCCAGT +
Preference number: 3 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPLRPDP*GTAKAS
Trigger: ACTGGCCTTTGCAGTCCCCAAAGGATCAGGTCTCAG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGCATCCCTTTGTGCTTaGTCTAGGAGACAGGGAAGG +
Preference number: 3 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDASLCA*SRRQGR
Trigger: CCTTCCCTGTCTCCTAGACAAAGCACAAAGGGATGC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR GCA 72 bp CTGGCTGAGGTCCCAAGGGTTTGGGGAGGGAGTCGTTaGCTTAGCTGGCCCTGGTATTCTGATCTTTACCCA +
Preference number: 3 (lower is better)
Translates to: LAEVPRVWGGSR*LSWPWYSDLYP
Trigger: TGGGTAAAGATCAGAATACCAGGGCCAGCTAAGGCAACGACTCCCTCCCCAAACCCTTGGGACCTCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp GATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTaGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTG +
Preference number: 3 (lower is better)
Translates to: DGRSLGQRKSFS*AGSSQAGHPFV
Trigger: CACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp CAGGTACATTCAGCAAAGGGCATCTTACGGGTGACATaGAGCAAAGTGCTGGGATGGCGATGCCTGGGTGGG +
Preference number: 3 (lower is better)
Translates to: QVHSAKGILRVT*SKVLGWRCLGG
Trigger: CCCACCCAGGCATCGCCATCCCAGCACTTTGCTCCATGTCACCCGTAAGATGCCCTTTGCTGAATGTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTGAGAAAATCCTTCAGTaGGGCAGGCTCAAGCCAAGC +
Preference number: 3 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSEKILQ*GRLKPS
Trigger: GCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTC...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCCACCCAGAGAGAAGTaGCCTAGAGCCTTGTATTCA +
Preference number: 3 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDPPREK*PRALYS
Trigger: TGAATACAAGGCTCTAGGCAACTTCTCTCTGGGTGG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp CACTCATCAGGGACTGACAGGCTGGGACAGGTCCCATaGGTTCGAGTTAACTTCTCTGGGCATTTGGGCCTT +
Preference number: 3 (lower is better)
Translates to: HSSGTDRLGQVP*VRVNFSGHLGL
Trigger: AAGGCCCAAATGCCCAGAGAAGTTAACTCGAACCCATGGGACCTGTCCCAGCCTGTCAGTCCCTGATGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGTGCGCCTTTCAGCTTaGAATTTAGCTCTGGTGTGC +
Preference number: 3 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRVRLSA*NLALVC
Trigger: GCACACCAGAGCTAAATTCAAAGCTGAAAGGCGCAC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR TCA 72 bp ACACTCAGGTACATTCAGCAAAGGGCATCTTACGGGTaGCATGGAGCAAAGTGCTGGGATGGCGATGCCTGG +
Preference number: 3 (lower is better)
Translates to: TLRYIQQRASYG*HGAKCWDGDAW
Trigger: CCAGGCATCGCCATCCCAGCACTTTGCTCCATGTCACCCGTAAGATGCCCTTTGCTGAATGTACCTGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR GCA 72 bp CAGACAGCCTTGGTGACCCGAAGGCCATCGGGTTCCTaGCCAAGCACCTGGATTAGAAGGAAATTCCTTAAG +
Preference number: 3 (lower is better)
Translates to: QTALVTRRPSGS*PSTWIRRKFLK
Trigger: CTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATGGCCTTCGGGTCACCAAGGCTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp ACCTTGGAAGGGTGGTCTCATCCTGGGGAGAAGTTCTaGGTGACTGTTTCCTTTCCAAACCCACCCCCACTA +
Preference number: 3 (lower is better)
Translates to: TLEGWSHPGEKF*VTVSFPNPPPL
Trigger: TAGTGGGGGTGGGTTTGGAAAGGAAACAGTCACCCAGAACTTCTCCCCAGGATGAGACCACCCTTCCAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp GGATCCCAGCTCTGGAGGACTCTTTACAAGGTAACCTaGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTT +
Preference number: 3 (lower is better)
Translates to: GSQLWRTLYKVT*GRVFMSKPGCV
Trigger: AACACAACCTGGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGCTGGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATaGAATACTCTGACCTCTCATTCTTGCTGCAAAGGA +
Preference number: 3 (lower is better)
Translates to: GHKSVSPRVRVQ*NTLTSHSCCKG
Trigger: TCCTTTGCAGCAAGAATGAGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCGTGCGCCTTTCAGCTTaGAATTTAGCTCTGGTGTGC +
Preference number: 3 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAVRLSA*NLALVC
Trigger: GCACACCAGAGCTAAATTCAAAGCTGAAAGGCGCAC...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTTCTGACCTCTCATTCTaGCTGCAAAGGATTGGGCCT +
Preference number: 3 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLSDLSF*LQRIGP
Trigger: AGGCCCAATCCTTTGCAGCAAGAATGAGAGGTCAGA...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR TCA 72 bp CCTGATCCTTTGGGGACTGCAAAGGCCAGTGAAAAGTaGATCCTGTGGCTTCTAAGCCAAGTGGCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: PDPLGTAKASEK*ILWLLSQVAPA
Trigger: AGCTGGAGCCACTTGGCTTAGAAGCCACAGGATTCACTTTTCACTGGCCTTTGCAGTCCCCAAAGGATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp TTGCCTAGAGCCTTGTATTCAGGGATGGAAGGTCCCTaGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAA +
Preference number: 3 (lower is better)
Translates to: LPRALYSGMEGP*GRENPSVGQAQ
Trigger: TTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCCCTGAATACAAGGCTCTAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp AGCAATATATACAGAAATGCAGGCCGGGCACAAGGCTaGGTGAGAAAGCATGGCCACTGGGTTGGAGAGAAG +
Preference number: 3 (lower is better)
Translates to: SNIYRNAGRAQG*VRKHGHWVGEK
Trigger: CTTCTCTCCAACCCAGTGGCCATGCTTTCTCACCCAGCCTTGTGCCCGGCCTGCATTTCTGTATATATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp GTCCCAAGGGTTTGGGGAGGGAGTCGTTGCCTTAGCTaGCCCTGGTATTCTGATCTTTACCCAATCCTAAAC +
Preference number: 3 (lower is better)
Translates to: VPRVWGGSRCLS*PWYSDLYPILN
Trigger: GTTTAGGATTGGGTAAAGATCAGAATACCAGGGCCAGCTAAGGCAACGACTCCCTCCCCAAACCCTTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGCATCCCTTTGTGCTTaGTCTAGGAGACAGGGAAGG +
Preference number: 3 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTASLCA*SRRQGR
Trigger: CCTTCCCTGTCTCCTAGACAAAGCACAAAGGGATGC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp ACCATCTCCTGTTTTTACCCCAAGTCCAACAGGAACTaGGACTTTGGCACCAATAGTCACTCTGGGAAGGCC +
Preference number: 3 (lower is better)
Translates to: TISCFYPKSNRN*DFGTNSHSGKA
Trigger: GGCCTTCCCAGAGTGACTATTGGTGCCAAAGTCCCAGTTCCTGTTGGACTTGGGGTAAAAACAGGAGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR GCA 72 bp GTGCGTGTGCAATGGAATACTCTGACCTCTCATTCTTaGTGCAAAGGATTGGGCCTGCTCACACACATCCTT +
Preference number: 3 (lower is better)
Translates to: VRVQWNTLTSHS*CKGLGLLTHIL
Trigger: AAGGATGTGTGTGAGCAGGCCCAATCCTTTGCAGCAAGAATGAGAGGTCAGAGTATTCCATTGCACACGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp AGGTCCCATGGGTTCGAGTTAACTTCTCTGGGCATTTaGGCCTTACACCCACTCACCATCTCCTGTTTTTAC +
Preference number: 3 (lower is better)
Translates to: RSHGFELTSLGI*ALHPLTISCFY
Trigger: GTAAAAACAGGAGATGGTGAGTGGGTGTAAGGCCCAAATGCCCAGAGAAGTTAACTCGAACCCATGGGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp AGGGTTTGGGGAGGGAGTCGTTGCCTTAGCTGGCCCTaGTATTCTGATCTTTACCCAATCCTAAACCTTATC +
Preference number: 3 (lower is better)
Translates to: RVWGGSRCLSWP*YSDLYPILNLI
Trigger: GATAAGGTTTAGGATTGGGTAAAGATCAGAATACCAGGGCCAGCTAAGGCAACGACTCCCTCCCCAAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CCA 72 bp TTACTGGGTATGAGATGTGAAGGGATCCCGTTTGGGTaGGTAAAGATGGATGAAGTGCTTCTAGGGATAGCC +
Preference number: 3 (lower is better)
Translates to: LLGMRCEGIPFG*VKMDEVLLGIA
Trigger: GGCTATCCCTAGAAGCACTTCATCCATCTTTACCCACCCAAACGGGATCCCTTCACATCTCATACCCAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR-3UTR CAA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATCAGATATTCCTTTCTaGCATCTTACTGGGTATGAG +
Preference number: 3 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTSDIPF*HLTGYE
Trigger: CTCATACCCAGTAAGATGCAAGAAAGGAATATCTGA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGGGCTGGGACCGCTCTaGGCCCCCGTTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDGLGPL*APVGSL
Trigger: CAGGCTGCCAACGGGGGCTCAGAGCGGTCCCAGCCC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCACGCATAGCGCGCTGCTaGGGCGGGCACAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAARIARC*GGHKAR
Trigger: CCGGGCCTTGTGCCCGCCGCAGCAGCGCGCTATGCG...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCACAGCCTGGGCCCGTGTaGCCAAGCCCCCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAQPGPV*PSPQGH
Trigger: GTGGCCCTGGGGGCTTGGGCACACGGGCCCAGGCTG...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACCGGCTGGCACACGGCTaGAGGCCCCTGTGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDRLAHG*RPLCSE
Trigger: CTCCGAGCACAGGGGCCTCCAGCCGTGTGCCAGCCG...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGGGGCTGACCCTCTCTaGTCGCCGACCCCGCCCACT +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAGADPL*SPTPPT
Trigger: AGTGGGCGGGGTCGGCGAGCAGAGAGGGTCAGCCCC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACCCAGGCAGCCCCGGGTaGTCCGGGCATACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDPGSPG*SGHTPP
Trigger: AGGAGGAGTATGCCCGGAGCACCCGGGGCTGCCTGG...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACAGGGGCCCCCTCCTCTaGCCTGGGCAGCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDRGPLL*PGQLQT
Trigger: AGTCTGGAGCTGCCCAGGCCAGAGGAGGGGGCCCCT...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGCTGCCAGTTCTGGATaGCCTGGCGCCGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDAASSG*PGAAGL
Trigger: CAGGCCTGCGGCGCCAGGCCATCCAGAACTGGCAGC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACCCCAGGGCCCGCAGGTaGGGCCAACAGCGACCAATC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDPRARR*GQQRPI
Trigger: GATTGGTCGCTGTTGGCCCCACCTGCGGGCCCTGGG...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGGGCTGGGACCGCTCTaGGCCCCCGTTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPGLGPL*APVGSL
Trigger: CAGGCTGCCAACGGGGGCTCAGAGCGGTCCCAGCCC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACTGGCACTCCTGTACGTaGCAGCCTGCAGGGCACGGC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDWHSCT*QPAGHG
Trigger: GCCGTGCCCTGCAGGCTGTCACGTACAGGAGTGCCA...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGCAGGCAGCGGTTACTaGAGCGTGTGGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDAGSGY*SVWAAG
Trigger: GCCAGCAGCCCACACGCTTCAGTAACCGCTGCCTGC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGCAGTTTCTCGCGAGTaGTGCCAGGCCCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDAVSRE*CQALHP
Trigger: GGGGTGCAGGGCCTGGCATCACTCGCGAGAAACTGC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCACCAGTTCGGCCGCCTTaGGCTCCAGCTCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAPVRPP*APARPA
Trigger: TGCAGGCCGAGCTGGAGCGCAAGGCGGCCGAACTGG...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGGCCCAGGCTGGCGCTaGGCGTGCTGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPGPGWR*ACCHSC
Trigger: GCAGCTGTGGCAGCACGCCCAGCGCCAGCCTGGGCC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCTGGGCCCCGGGCATTaGGTCCAGCACCACCGCCCC +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPLGPGH*VQHHRP
Trigger: GGGGCGGTGGTGCTGGACCCAATGCCCGGGGCCCAG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGGGCCATGCTGGCAGTaGCAGAGGAGGCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDGPCWQ*QRRLGL
Trigger: GAGGCCAAGCCTCCTCTGCCACTGCCAGCATGGCCC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACCCCAGACAGCCTTGGTaGCCCGAAGGCCATCGGGTT +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDPRQPW*PEGHRV
Trigger: AACCCGATGGCCTTCGGGTCACCAAGGCTGTCTGGG...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACTTGTCAGGGCAGAGCTaGGGCTGGCAAGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDLSGQS*GWQAQG
Trigger: GCCTTGGGCTTGCCAGCCTCAGCTCTGCCCTGACAA...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCTCCGGAAGCGCTTGTaGTCCCCGCAGCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPLRKRL*SPQRGQ
Trigger: CTGCCCCCGCTGCGGGGAGCACAAGCGCTTCCGGAG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCACCTCTTCCCCCTCAGTaGTGTGTCGGCGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAPLPPQ*CVGGVC
Trigger: GCAGACCCCGCCGACACAGCACTGAGGGGGAAGAGG...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACTTCTCGCATTCTGCCTaGGCCCCGGGCATTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDFSHSA*APGIGS
Trigger: GGACCCAATGCCCGGGGCCCAGGCAGAATGCGAGAA...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGTCCAGACTGCGGGGTaGCGGGCCACGAAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPVQTAG*RATKRQ
Trigger: CTGGCGCTTCGTGGCCCGCCACCCCGCAGTCTGGAC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGAGAGTGCCCTGGTGTaGGGCTGGCAGGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPESALV*GWQGPC
Trigger: GCAGGGCCCCTGCCAGCCCCACACCAGGGCACTCTC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGGCTTGGCCTCACGGTaGGGAGCCTGCCTGATTGTC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDGLASR*GACLIV
Trigger: GACAATCAGGCAGGCTCCCCACCGTGAGGCCAAGCC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGACCTCATTGGAGCGTaGGGGGCTGACCCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAADLIGA*GADPLC
Trigger: GCAGAGAGGGTCAGCCCCTCACGCTCCAATGAGGTC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGGCCCCAGATGCTCCTaGCCAGGAGGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPGPRCS*PGGWAS
Trigger: TGAGGCCCAGCCTCCTGGTCAGGAGCATCTGGGGCC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCATGGTGGGGCAGGGGCTaGAAAGCTGCCAGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAWWGRG*KAASAW
Trigger: CCAAGCACTGGCAGCTTTGCAGCCCCTGCCCCACCA...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCAGGGGCCCCCTCCTCTaGCCTGGGCAGCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPRGPLL*PGQLQT
Trigger: AGTCTGGAGCTGCCCAGGCCAGAGGAGGGGGCCCCT...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACCTGGCAGGGGTGAAGTaGTGCCACTTGGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDLAGVK*CHLEGD
Trigger: GTCTCCCTCCAAGTGGCACCACTTCACCCCTGCCAG...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCATCCAAGCCCCTGTACTaGGGAGGCAGTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAASKPLY*GGSALG
Trigger: ACCCAGGGCACTGCCTCCCCAGTACAGGGGCTTGGA...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAAAGCCACCCTCCTCCTaGCTTCCTCCACGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAKPPSS*LPPRPQ
Trigger: CTGAGGCCGTGGAGGAAGCCAGGAGGAGGGTGGCTT...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGTCCCTGGGAAGGACTaGGTAACGAGGGGACCCCAT +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDVPGKD*VTRGPH
Trigger: ATGGGGTCCCCTCGTTACCCAGTCCTTCCCAGGGAC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGTGCTGCTGCGCCCATaGGATCCCAGCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAVLLRP*DPSSGG
Trigger: TCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCAC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACCAGGGACTGACAGGCTaGGACAGGTCCCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDQGLTG*DRSHGF
Trigger: GAACCCATGGGACCTGTCCCAGCCTGTCAGTCCCTG...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGGCTTGGCCTCACGGTaGGGAGCCTGCCTGATTGTC +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAGLASR*GACLIV
Trigger: GACAATCAGGCAGGCTCCCCACCGTGAGGCCAAGCC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTCGGGCCCTCAGCCTCTaGCTCAGTGGTTCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSRALSL*LSGSGA
Trigger: GGCTCCCGAACCACTGAGTCAGAGGCTGAGGGCCCG...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGCGTGTCCAGGTAGGTaGAGATGCAGAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDACPGR*RCRRGQ
Trigger: CTGCCCTCTTCTGCATCTTCACCTACCTGGACACGC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGTGCTTGGGCATGCATaGAGGCTAGGGGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDVLGHA*RLGGTS
Trigger: ACTTGTGCCCCCTAGCCTTCATGCATGCCCAAGCAC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCACCACCTCCTGCTGCTTaGGGCTCAGCTCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAPPPAA*GSAPVP
Trigger: AGGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGG...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCATGCACCACCTCCTGCTaGTTGCGGCTCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAACTTSC*LRLSSC
Trigger: ACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGGTGCA...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCCAGCCTGGGCCCGTGTaGCCAAGCCCCCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPQPGPV*PSPQGH
Trigger: GTGGCCCTGGGGGCTTGGGCACACGGGCCCAGGCTG...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTCGGCGGGGTCTGCGCTaGCAGTTCTGGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSRRGLR*QFWMAW
Trigger: CCAGGCCATCCAGAACTGGCAGCGCAGACCCCGCCG...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCCTCTTCCCCCTCAGTaGTGTGTCGGCGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPPLPPQ*CVGGVC
Trigger: GCAGACCCCGCCGACACAGCACTGAGGGGGAAGAGG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGAGAGTGGGCCTGGGTaGACCACTGAGCCAGCATTG +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAESGPG*TTEPAL
Trigger: CAATGCTGGCTCAGTGGTGCACCCAGGCCCACTCTC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACTCCTTCTTTCCCCGCTaGCGGGGCTTCAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDSFFPR*RGFKFC
Trigger: GCAGAACTTGAAGCCCCGGCAGCGGGGAAAGAAGGA...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCATTCCCGGCAGACCTCTaGTGCCACCTCCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAFPADL*CHLLGD
Trigger: ATCACCCAGGAGGTGGCAGCAGAGGTCTGCCGGGAA...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGGCTGGCAGGGGCCCTaGCGCCCCCTACCCGGGTTA +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRGWQGP*RPLPGL
Trigger: TAACCCGGGTAGGGGGCGGCAGGGCCCCTGCCAGCC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCGGGCGAGGCCCCCTaGGGGGTCAGGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRAGEAP*GVRKAQ
Trigger: CTGAGCCTTCCTGACCCCGCAGGGGGCCTCGCCCGC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGGCCCAGGCTGGCGCTaGGCGTGCTGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWGPGWR*ACCHSC
Trigger: GCAGCTGTGGCAGCACGCCCAGCGCCAGCCTGGGCC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGCTGGGCCCCGGGCATTaGGTCCAGCACCACCGCCCC +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVLGPGH*VQHHRP
Trigger: GGGGCGGTGGTGCTGGACCCAATGCCCGGGGCCCAG...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAGAGCTGCGAGGGGGCTaGGACCGCTCTGAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPELRGG*DRSEPP
Trigger: CGGGGGCTCAGAGCGGTCCCAGCCCCCTCGCAGCTC...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGCAGGGAGAAGCCAATaGAGCCAGCTGCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAAGRSQ*SQLLWG
Trigger: ACCCCAGAGCAGCTGGCTCCATTGGCTTCTCCCTGC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGGGCAGCCTTGGGACTaGCTGAGGTCCCAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAGQPWD*LRSQGF
Trigger: AAACCCTTGGGACCTCAGCCAGTCCCAAGGCTGCCC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCTGGGGCAGAGAAGTGTaGCCAGGGAAGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPWGREV*PGKAPW
Trigger: CCAGGGGGCCTTCCCTGGCCACACTTCTCTGCCCCA...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACCAGCGCGCGGATCTTaGGGCGCGCCAGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPPARGS*GAPGPL
Trigger: AAGAGGGCCTGGCGCGCCTCAAGATCCGCGCGCTGG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACGGGCTGGGACCGCTCTaGGCCCCCGTTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHGLGPL*APVGSL
Trigger: CAGGCTGCCAACGGGGGCTCAGAGCGGTCCCAGCCC...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGGCTGCTGGCAGGGGTaGAGTGGTGCCACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSGCWQG*SGATWR
Trigger: CCTCCAAGTGGCACCACTTCACCCCTGCCAGCAGCC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAAACTACTTCTCACTGTaGCAGGGCTGCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAANYFSL*QGCLGL
Trigger: CAGCCCCAGGCAGCCCTGTCACAGTGAGAAGTAGTT...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACCTACTGTGGGAGTTCTaGGAGGAGGAACTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDLLWEF*EEELGR
Trigger: TCTCCCCAGTTCCTCCTCTCAGAACTCCCACAGTAG...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGCTCCGGAAGCGCTTGTaGTCCCCGCAGCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVLRKRL*SPQRGQ
Trigger: CTGCCCCCGCTGCGGGGAGCACAAGCGCTTCCGGAG...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTGGCTGTACTCCAGGTaGGCGCGCAGCGACGACAGG +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSWLYSR*ARSDDR
Trigger: CCTGTCGTCGCTGCGCGCGCACCTGGAGTACAGCCA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCGCATAGCGCGCTGCTaGGGCGGGCACAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHRIARC*GGHKAR
Trigger: CCGGGCCTTGTGCCCGCCGCAGCAGCGCGCTATGCG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCAGCCTCGCACTCTCCTaGCGCGCAGTCTCCAGTTCG +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPSLALS*RAVSSS
Trigger: CGAACTGGAGACTGCGCGGCAGGAGAGTGCGAGGCT...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCATCCTCAATGAACTGCTaGAGCCGCAGCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAASSMNC*SRSLAL
Trigger: CAGCGCCAAGCTGCGGCTGCAGCAGTTCATTGAGGA...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACCTCGGAGAGGAGCCATaGCGTGACACTGCATATGTG +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDLGEEP*RDTAYV
Trigger: CACATATGCAGTGTCACGGCATGGCTCCTCTCCGAG...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTGGGGCTGACCCTCTCTaGTCGCCGACCCCGCCCACT +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSGADPL*SPTPPT
Trigger: AGTGGGCGGGGTCGGCGAGCAGAGAGGGTCAGCCCC...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACTTGGACAGTGGGAGATaGGCAGGATCAGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDLDSGR*AGSAGS
Trigger: GGAACCTGCTGATCCTGCGCATCTCCCACTGTCCAA...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACTCAAGCTCCAGGACCTaGAGCCGCATGCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDSSSRT*SRMQFL
Trigger: GAGAAACTGCATGCGGCTGCAGGTCCTGGAGCTTGA...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCGGCTGGCAGGGGCCCTaGCGCCCCCTACCCGGGTTA +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAGWQGP*RPLPGL
Trigger: TAACCCGGGTAGGGGGCGGCAGGGCCCCTGCCAGCC...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCATCAGGCCTGTTGCTCTaGTGCTCCAGGAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAASGLLL*CSRRRT
Trigger: TGTCCTCCTCCTGGAGCAGCAGAGCAACAGGCCTGA...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGGCTGTCTGAAGGGGTaGCCCCAGAAGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPGCLKG*PQKAAA
Trigger: TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACATGGGTCTGGCTCCCTaGCAAGGCCACATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDMGLAP*QGHIFK
Trigger: CTTGAAGATGTGGCCTTGGCAGGGAGCCAGACCCAT...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACCTGCAAAGCTGCCAGTaGTTGGGCATGCATGAAGGC +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDLQSCQ*LGMHEG
Trigger: GCCTTCATGCATGCCCAAGCACTGGCAGCTTTGCAG...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGTCACCTCAGGCCTCTaGCCTGGATACAAGACCCTT +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDVTSGL*PGYKTL
Trigger: AAGGGTCTTGTATCCAGGGCAGAGGCCTGAGGTGAC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGCGGGCGAGGCCCCCTaGGGGGTCAGGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPAGEAP*GVRKAQ
Trigger: CTGAGCCTTCCTGACCCCGCAGGGGGCCTCGCCCGC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGCCTGCTCCTTGCCCTaGAAGGAAGTGCTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAACSLP*KEVLSK
Trigger: CTTCGAGAGCACTTCCTTCCAGGGCAAGGAGCAGGC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATTGCAGCCGGCCCACCTaGCCCGCGATCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDCSRPT*PAIFCS
Trigger: GGAGCAGAAGATCGCGGGCCAGGTGGGCCGGCTGCA...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCTGGGCCCCGGGCATTaGGTCCAGCACCACCGCCCC +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHLGPGH*VQHHRP
Trigger: GGGGCGGTGGTGCTGGACCCAATGCCCGGGGCCCAG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCACGGCCGGGCCCACGTaGTGTTCTCGCATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPTAGPT*CSRILP
Trigger: AGGCAGAATGCGAGAACACCACGTGGGCCCGGCCGT...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCCGGCTGGCACACGGCTaGAGGCCCCTGTGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPRLAHG*RPLCSE
Trigger: CTCCGAGCACAGGGGCCTCCAGCCGTGTGCCAGCCG...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCTCTGGGATGCGGCTaGCACACGGCTGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRALGCG*HTAGGP
Trigger: GGGGCCTCCAGCCGTGTGCCAGCCGCATCCCAGAGC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGGCTCTGGGATGCGGCTaGCACACGGCTGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVALGCG*HTAGGP
Trigger: GGGGCCTCCAGCCGTGTGCCAGCCGCATCCCAGAGC...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGTCCAGACTGCGGGGTaGCGGGCCACGAAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRVQTAG*RATKRQ
Trigger: CTGGCGCTTCGTGGCCCGCCACCCCGCAGTCTGGAC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTCACGGCAGTAGCAGCTaGCCAGCCAGAGCGAGCGGT +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSHGSSS*PARASG
Trigger: ACCGCTCGCTCTGGCTGGCCAGCTGCTACTGCCGTG...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTAGTCCACGGGGCCCGTaGAGACCAAGGAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSSPRGP*RPRKGE
Trigger: CTCCCCCTTCCTTGGTCTCCACGGGCCCCGTGGACT...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGCGTCAAGGGGCTGGTaGGGCAGGGGCTGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSASRGW*GRGCKA
Trigger: AGCTTTGCAGCCCCTGCCCCACCAGCCCCTTGACGC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGCCTTGATCCTTAGGTaGTCTCTCCTGGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDALILR*SLLAGE
Trigger: TTCCCCAGCCAGGAGAGACCACCTAAGGATCAAGGC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGGCCGGGCACAAGGCTaGGTGAGAAAGCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPGRAQG*VRKHGH
Trigger: GTGGCCATGCTTTCTCACCCAGCCTTGTGCCCGGCC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGACGCAGGGCCGCCTTaGGGCCTCGGATCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDDAGPP*GLGSRS
Trigger: GGAACGAGATCCGAGGCCCCAAGGCGGCCCTGCGTC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGTGGAGCGTGAGGGGCTaGCCCTCTCTGCTCGCCGAC +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRWSVRG*PSLLAD
Trigger: GTCGGCGAGCAGAGAGGGTCAGCCCCTCACGCTCCA...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGCGCCCAGGGCCCAAATaGCCTCATGGCCCACGGGGT +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVRPGPK*PHGPRG
Trigger: ACCCCGTGGGCCATGAGGTCATTTGGGCCCTGGGCG...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGGCCCCAGATGCTCCTaGCCAGGAGGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRGPRCS*PGGWAS
Trigger: TGAGGCCCAGCCTCCTGGTCAGGAGCATCTGGGGCC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAGGCCCCAGATGCTCCTaGCCAGGAGGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPGPRCS*PGGWAS
Trigger: TGAGGCCCAGCCTCCTGGTCAGGAGCATCTGGGGCC...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGGATTGGGGCCCGGGTaGCTCCCCACTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCGLGPG*LPTGGP
Trigger: GGGGCCACCAGTGGGGAGTCACCCGGGCCCCAATCC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTTGTCAGGGCAGAGCTaGGGCTGGCAAGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSLSGQS*GWQAQG
Trigger: GCCTTGGGCTTGCCAGCCTCAGCTCTGCCCTGACAA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCCTCCGGAAGCGCTTGTaGTCCCCGCAGCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPLRKRL*SPQRGQ
Trigger: CTGCCCCCGCTGCGGGGAGCACAAGCGCTTCCGGAG...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCGGCGCCGTCGCAGATaGTGTTGGTCTTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPRRRRR*CWSWRG
Trigger: TCCTCTCCAAGACCAACAGCATCTGCGACGGCGCCG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCCAGCGCATAGCGCGCTaGTGCGGCGGGCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPQRIAR*CGGHKA
Trigger: GGCCTTGTGCCCGCCGCAGCAGCGCGCTATGCGCTG...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACCAGTTCGGCCGCCTTaGGCTCCAGCTCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPPVRPP*APARPA
Trigger: TGCAGGCCGAGCTGGAGCGCAAGGCGGCCGAACTGG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCACTCGGAGAGGAGCCATaGCGTGACACTGCATATGTG +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAALGEEP*RDTAYV
Trigger: CACATATGCAGTGTCACGGCATGGCTCCTCTCCGAG...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGGGCTGGAGGCCCCTGTaGTCGGAGAGGAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVGWRPL*SERSHA
Trigger: GGCATGGCTCCTCTCCGAGCACAGGGGCCTCCAGCC...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAGGCTGGAGGCCCCTGTaGTCGGAGAGGAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPGWRPL*SERSHA
Trigger: GGCATGGCTCCTCTCCGAGCACAGGGGCCTCCAGCC...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGGCTGGAGGCCCCTGTaGTCGGAGAGGAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRGWRPL*SERSHA
Trigger: GGCATGGCTCCTCTCCGAGCACAGGGGCCTCCAGCC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCGGGGCTTCAAGTTCTaGAGCGTCAGAGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPRGFKF*SVREWA
Trigger: GGCCCACTCTCTGACGCTGCAGAACTTGAAGCCCCG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTCCAGGCAGCCCCGGGTaGTCCGGGCATACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSPGSPG*SGHTPP
Trigger: AGGAGGAGTATGCCCGGAGCACCCGGGGCTGCCTGG...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGCCAGGCAGCCCCGGGTaGTCCGGGCATACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRPGSPG*SGHTPP
Trigger: AGGAGGAGTATGCCCGGAGCACCCGGGGCTGCCTGG...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTCCGGCAGACCTCTGCTaGCACCTCCTGGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSPADLC*HLLGDL
Trigger: GAGATCACCCAGGAGGTGGCAGCAGAGGTCTGCCGG...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGCTCCTCACTGGCTGTaGCAGAGGCTACTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSAPHWL*QRLLQP
Trigger: CGGCTGGAGTAGCCTCTGGCACAGCCAGTGAGGAGC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAATGGGTCTGGCTCCCTaGCAAGGCCACATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAMGLAP*QGHIFK
Trigger: CTTGAAGATGTGGCCTTGGCAGGGAGCCAGACCCAT...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTCATGGGAGCTGGGTGTaGTGCTGCGCCCATGGGATC +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSHGSWV*CCAHGI
Trigger: GATCCCATGGGCGCAGCAGCACACCCAGCTCCCATG...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCAGAAGAGCCCCCGCGTaGCCGGTCCAGACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPRRAPA*PVQTQG
Trigger: GCCCTGCGTCTGGACCGGGCACGCGGGGGCTCTTCT...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGTGCAGCCGGCCCACCTaGCCCGCGATCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVCSRPT*PAIFCS
Trigger: GGAGCAGAAGATCGCGGGCCAGGTGGGCCGGCTGCA...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATGGCCCAGGCTGGCGCTaGGCGTGCTGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDGPGWR*ACCHSC
Trigger: GCAGCTGTGGCAGCACGCCCAGCGCCAGCCTGGGCC...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGCTCTGGGATGCGGCTaGCACACGGCTGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLALGCG*HTAGGP
Trigger: GGGGCCTCCAGCCGTGTGCCAGCCGCATCCCAGAGC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCCCCCCGTTGGCAGCCTaGGCCCGTGTGCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCPPLAA*ARVPKP
Trigger: GGGCTTGGGCACACGGGCCCAGGCTGCCAACGGGGG...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAGCTGCCAGTTCTGGATaGCCTGGCGCCGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPAASSG*PGAAGL
Trigger: CAGGCCTGCGGCGCCAGGCCATCCAGAACTGGCAGC...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACCCAGGGCCCGCAGGTaGGGCCAACAGCGACCAATC +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPPRARR*GQQRPI
Trigger: GATTGGTCGCTGTTGGCCCCACCTGCGGGCCCTGGG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGTGATCTCTGACACGTaGTCAAGCTCCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAVISDT*SSSRTC
Trigger: GCAGGTCCTGGAGCTTGACCACGTGTCAGAGATCAC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCGAGAGTGCCCTGGTGTaGGGCTGGCAGGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAESALV*GWQGPC
Trigger: GCAGGGCCCCTGCCAGCCCCACACCAGGGCACTCTC...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAAGGGTGGTCTCATCCTaGGGAGAAGTTCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAARVVSS*GEVLGD
Trigger: GTCACCCAGAACTTCTCCCCAGGATGAGACCACCCT...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTAAGCCACCCTCCTCCTaGCTTCCTCCACGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSKPPSS*LPPRPQ
Trigger: CTGAGGCCGTGGAGGAAGCCAGGAGGAGGGTGGCTT...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATAGTCCACGGGGCCCGTaGAGACCAAGGAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDSPRGP*RPRKGE
Trigger: CTCCCCCTTCCTTGGTCTCCACGGGCCCCGTGGACT...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGGAGACCTCAGCCTTTaGAGCCTTGGTTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAGDLSL*SLGSET
Trigger: GGTCTCAGAACCAAGGCTCCAAAGGCTGAGGTCTCC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGTCCCTGGGAAGGACTaGGTAACGAGGGGACCCCAT +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPVPGKD*VTRGPH
Trigger: ATGGGGTCCCCTCGTTACCCAGTCCTTCCCAGGGAC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGCCTTGATCCTTAGGTaGTCTCTCCTGGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAALILR*SLLAGE
Trigger: TTCCCCAGCCAGGAGAGACCACCTAAGGATCAAGGC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATTGGGGCAGAGAAGTGTaGCCAGGGAAGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDWGREV*PGKAPW
Trigger: CCAGGGGGCCTTCCCTGGCCACACTTCTCTGCCCCA...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTCCCCTCCGCAGCCTTaGGTGGCCGCCGCGGCTAGC +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCSPPQP*VAAAAS
Trigger: GCTAGCCGCGGCGGCCACCCAAGGCTGCGGAGGGGA...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATTCCCCTCCGCAGCCTTaGGTGGCCGCCGCGGCTAGC +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDSPPQP*VAAAAS
Trigger: GCTAGCCGCGGCGGCCACCCAAGGCTGCGGAGGGGA...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATAGGGCGCCCGCGGCCTaGGGCGAGGAGGCCTTACCT +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDRAPAA*GEEALP
Trigger: AGGTAAGGCCTCCTCGCCCCAGGCCGCGGGCGCCCT...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521871.5
CDS-3UTR TCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTACTGTCATAGCAGCCTaGGCTCTGGGATGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSTVIAA*ALGCGW
Trigger: CCAGCCGCATCCCAGAGCTCAGGCTGCTATGACAGT...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCGGGCCCTCAGCCTCTaGCTCAGTGGTTCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHRALSL*LSGSGA
Trigger: GGCTCCCGAACCACTGAGTCAGAGGCTGAGGGCCCG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCCGGGCCCTCAGCCTCTaGCTCAGTGGTTCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQARALSL*LSGSGA
Trigger: GGCTCCCGAACCACTGAGTCAGAGGCTGAGGGCCCG...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTTGGAGCGTGAGGGGCTaGCCCTCTCTGCTCGCCGAC +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLWSVRG*PSLLAD
Trigger: GTCGGCGAGCAGAGAGGGTCAGCCCCTCACGCTCCA...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGCGTGTCCAGGTAGGTaGAGATGCAGAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPACPGR*RCRRGQ
Trigger: CTGCCCTCTTCTGCATCTTCACCTACCTGGACACGC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTTGGCACTCCTGTACGTaGCAGCCTGCAGGGCACGGC +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSWHSCT*QPAGHG
Trigger: GCCGTGCCCTGCAGGCTGTCACGTACAGGAGTGCCA...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCGCCCAGGGCCCAAATaGCCTCATGGCCCACGGGGT +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHRPGPK*PHGPRG
Trigger: ACCCCGTGGGCCATGAGGTCATTTGGGCCCTGGGCG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCCGCCCAGGGCCCAAATaGCCTCATGGCCCACGGGGT +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQARPGPK*PHGPRG
Trigger: ACCCCGTGGGCCATGAGGTCATTTGGGCCCTGGGCG...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCGCAGGCAGCGGTTACTaGAGCGTGTGGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPAGSGY*SVWAAG
Trigger: GCCAGCAGCCCACACGCTTCAGTAACCGCTGCCTGC...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCGCAGTTTCTCGCGAGTaGTGCCAGGCCCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPAVSRE*CQALHP
Trigger: GGGGTGCAGGGCCTGGCATCACTCGCGAGAAACTGC...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCTGCCACCTCCTGGGTaGTCTCTGACACGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPLPPPG*SLTRGQ
Trigger: TTGACCACGTGTCAGAGATCACCCAGGAGGTGGCAG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCCCAGACAGCCTTGGTaGCCCGAAGGCCATCGGGTT +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDPRQPW*PEGHRV
Trigger: AACCCGATGGCCTTCGGGTCACCAAGGCTGTCTGGG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACGCATCTTACTGGGTATaGGATGTGAAGGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDASYWV*DVKGSR
Trigger: ACGGGATCCCTTCACATCTCATACCCAGTAAGATGC...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGATTGGGGCCCGGGTaGCTCCCCACTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLGLGPG*LPTGGP
Trigger: GGGGCCACCAGTGGGGAGTCACCCGGGCCCCAATCC...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGGATTGGGGCCCGGGTaGCTCCCCACTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTGLGPG*LPTGGP
Trigger: GGGGCCACCAGTGGGGAGTCACCCGGGCCCCAATCC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGGGCACAAGGCTGGGTaGGAAAGCATGGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDGHKAG*ESMATG
Trigger: CCCAGTGGCCATGCTTTCTCACCCAGCCTTGTGCCC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCTGGCTGTACTCCAGGTaGGCGCGCAGCGACGACAGG +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPWLYSR*ARSDDR
Trigger: CCTGTCGTCGCTGCGCGCGCACCTGGAGTACAGCCA...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCTGCCCTGGAAGGAAGTaGTCTCGAAGACCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPCPGRK*SRRPLA
Trigger: GGCGAGAGGTCTTCGAGAGCACTTCCTTCCAGGGCA...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATCAGCGCATAGCGCGCTaGTGCGGCGGGCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDQRIAR*CGGHKA
Trigger: GGCCTTGTGCCCGCCGCAGCAGCGCGCTATGCGCTG...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGGACGCCACGGACTTaGGGGCGAACAGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPRTPRT*GRTAPP
Trigger: TGGGGGAGCTGTTCGCCCGCAAGTCCGTGGCGTCCT...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCCAGTTCGGCCGCCTTaGGCTCCAGCTCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHPVRPP*APARPA
Trigger: TGCAGGCCGAGCTGGAGCGCAAGGCGGCCGAACTGG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACACAGCCTGGGCCCGTGTaGCCAAGCCCCCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTQPGPV*PSPQGH
Trigger: GTGGCCCTGGGGGCTTGGGCACACGGGCCCAGGCTG...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCGGCGGGGTCTGCGCTaGCAGTTCTGGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHRRGLR*QFWMAW
Trigger: CCAGGCCATCCAGAACTGGCAGCGCAGACCCCGCCG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCCCTCTTCCCCCTCAGTaGTGTGTCGGCGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPPLPPQ*CVGGVC
Trigger: GCAGACCCCGCCGACACAGCACTGAGGGGGAAGAGG...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCGGGAGACGATCTCTCTaGAGCCTGCGCCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAGRRSL*SLRPGP
Trigger: GGGCCCTGGGCGCAGGCTGCAGAGAGATCGTCTCCC...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGGGAGACGATCTCTCTaGAGCCTGCGCCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPGRRSL*SLRPGP
Trigger: GGGCCCTGGGCGCAGGCTGCAGAGAGATCGTCTCCC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGAGGTCCAAAGAGAGTaGCCTGGTGTGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSEVQRE*PGVGLA
Trigger: TGCCAGCCCCACACCAGGGCACTCTCTTTGGACCTC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGTGCCCCCAGAAGGCTaGAGCAAGGTTGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPVPPEG*SKVEEK
Trigger: CTTCTCCTCAACCTTGCTGCAGCCTTCTGGGGGCAC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTACGCTCACGTCCACCTaGCGGGAGAGCTCAGACGCG +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSTLTST*RESSDA
Trigger: CGCGTCTGAGCTCTCCCGCCAGGTGGACGTGAGCGT...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGACGCTCACGTCCACCTaGCGGGAGAGCTCAGACGCG +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWTLTST*RESSDA
Trigger: CGCGTCTGAGCTCTCCCGCCAGGTGGACGTGAGCGT...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACACCCCCGTTGGCAGCCTaGGCCCGTGTGCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTPPLAA*ARVPKP
Trigger: GGGCTTGGGCACACGGGCCCAGGCTGCCAACGGGGG...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATGTCCAGACTGCGGGGTaGCGGGCCACGAAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDVQTAG*RATKRQ
Trigger: CTGGCGCTTCGTGGCCCGCCACCCCGCAGTCTGGAC...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTGTGGATCCACAGCCTaGGCAGGCTGTCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSCGSTA*AGCLKG
Trigger: CCCCTTCAGACAGCCTGCCCAGGCTGTGGATCCACA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCGCTGCCCCCAGCTTTTaGCTGACCACGTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPAAPSF*LTTCPG
Trigger: GCCTGGGCACGTGGTCAGCCAAAAGCTGGGGGCAGC...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCAGCTCTGGTGTGCGGTaGGGTATGAGGTTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPSSGVR*GMRLGG
Trigger: TCCTCCCAACCTCATACCCCACCGCACACCAGAGCT...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTAGGGCTGCCTGGGGCTaGGACCTTGACCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSRAAWG*DLDPLE
Trigger: CTCCAGAGGGTCAAGGTCCCAGCCCCAGGCAGCCCT...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGAGGGCTGCCTGGGGCTaGGACCTTGACCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVRAAWG*DLDPLE
Trigger: CTCCAGAGGGTCAAGGTCCCAGCCCCAGGCAGCCCT...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGTGCTGCTGCGCCCATaGGATCCCAGCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDVLLRP*DPSSGG
Trigger: TCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCAC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCATCCCTTCCAGGCCTCTaGAGGAGAGGAAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAASLPGL*RRGKKA
Trigger: AGCTTTCTTTCCTCTCCTCCAGAGGCCTGGAAGGGA...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCACAGCCAGAACAGGGTaGAGGACTGAGGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPTARTG*RTEGLS
Trigger: GGAAAGCCCCTCAGTCCTCCACCCTGTTCTGGCTGT...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGTGGTCTCTCCTGGCTaGGGAAAGGCTGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSVVSPG*GKAVVL
Trigger: CAGCACCACAGCCTTTCCCCAGCCAGGAGAGACCAC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGATGGAGCCAAACCTTaGAGTAGCAGGCCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAADGAKP*SSRPWE
Trigger: TTCCCAAGGCCTGCTACTCCAAGGTTTGGCTCCATC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAGTGGCAGAGGAGGCTTaGCCTCACGGTGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPVAEEA*PHGGEP
Trigger: AGGCTCCCCACCGTGAGGCCAAGCCTCCTCTGCCAC...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCCAGGGAAGGCCCCCTaGGGGCTGGAGGTACAGGCA +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHPGKAP*GLEVQA
Trigger: TGCCTGTACCTCCAGCCCCCAGGGGGCCTTCCCTGG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCCCAGGGAAGGCCCCCTaGGGGCTGGAGGTACAGGCA +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPPGKAP*GLEVQA
Trigger: TGCCTGTACCTCCAGCCCCCAGGGGGCCTTCCCTGG...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTTGGGGCAGAGAAGTGTaGCCAGGGAAGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSWGREV*PGKAPW
Trigger: CCAGGGGGCCTTCCCTGGCCACACTTCTCTGCCCCA...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACATCTTACGGGTGACATaGAGCAAAGTGCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDILRVT*SKVLGW
Trigger: CCATCCCAGCACTTTGCTCCATGTCACCCGTAAGAT...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACACCAGCGCGCGGATCTTaGGGCGCGCCAGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTPARGS*GAPGPL
Trigger: AAGAGGGCCTGGCGCGCCTCAAGATCCGCGCGCTGG...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTCCAGCGCGCGGATCTTaGGGCGCGCCAGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLPARGS*GAPGPL
Trigger: AAGAGGGCCTGGCGCGCCTCAAGATCCGCGCGCTGG...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGGCTGCTGGCAGGGGTaGAGTGGTGCCACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLGCWQG*SGATWR
Trigger: CCTCCAAGTGGCACCACTTCACCCCTGCCAGCAGCC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACGGCTGCTGGCAGGGGTaGAGTGGTGCCACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHGCWQG*SGATWR
Trigger: CCTCCAAGTGGCACCACTTCACCCCTGCCAGCAGCC...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGGACCACAATGGACTTaGGGTTCCGGCAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPGPQWT*GSGRCC
Trigger: ACAGCATCTGCCGGAACCTCAAGTCCATTGTGGTCC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCAGGACCCCCGGCCTCTaGGCTACTGTGGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPRTPGL*ATVGVL
Trigger: CAGAACTCCCACAGTAGCTCAGAGGCCGGGGGTCCT...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGACAGAGCTAGGGAGTaGCGCCATGGGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWDRARE*RHGSWV
Trigger: CACCCAGCTCCCATGGCGTCACTCCCTAGCTCTGTC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGGGGCACAAGGCTGGGTaGGAAAGCATGGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVGHKAG*ESMATG
Trigger: CCCAGTGGCCATGCTTTCTCACCCAGCCTTGTGCCC...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGTTGTCAGGGCAGAGCTaGGGCTGGCAAGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRLSGQS*GWQAQG
Trigger: GCCTTGGGCTTGCCAGCCTCAGCTCTGCCCTGACAA...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTGCCCTGGAAGGAAGTaGTCTCGAAGACCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSCPGRK*SRRPLA
Trigger: GGCGAGAGGTCTTCGAGAGCACTTCCTTCCAGGGCA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACGGCCGCCTGCTCCTTaGCCTGGAAGGAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPRPPAP*PGRKCS
Trigger: AGAGCACTTCCTTCCAGGGCAAGGAGCAGGCGGCCG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGGTGTTCTCGCATTCTaGCTGGGCCCCGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWGVLAF*LGPGHW
Trigger: CCAATGCCCGGGGCCCAGGCAGAATGCGAGAACACC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTTGTGTCGGCGGGGTCTaGGCTGCCAGTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSCVGGV*AASSGW
Trigger: CCATCCAGAACTGGCAGCGCAGACCCCGCCGACACA...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGTGTGTCGGCGGGGTCTaGGCTGCCAGTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRCVGGV*AASSGW
Trigger: CCATCCAGAACTGGCAGCGCAGACCCCGCCGACACA...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGGGGCTGACCCTCTCTaGTCGCCGACCCCGCCCACT +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTGADPL*SPTPPT
Trigger: AGTGGGCGGGGTCGGCGAGCAGAGAGGGTCAGCCCC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGCAGACCTCGGCAGCATaGAGCAGTGTGCGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVQTSAA*SSVRVS
Trigger: GGACACGCGCACACTGCTGCATGCTGCCGAGGTCTG...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCCACTGAGCCAGCATTaGCAGGAACTTGGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPPLSQH*QELGAD
Trigger: GTCTGCTCCAAGTTCCTGGCAATGCTGGCTCAGTGG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGGACCTGCAGCCGCATaGAGTTTCTCGCGAGTGATG +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSGPAAA*SFSRVM
Trigger: CATCACTCGCGAGAAACTGCATGCGGCTGCAGGTCC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGGCTGGCAGGGGCCCTaGCGCCCCCTACCCGGGTTA +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGGWQGP*RPLPGL
Trigger: TAACCCGGGTAGGGGGCGGCAGGGCCCCTGCCAGCC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTCAGGCCTGTTGCTCTaGTGCTCCAGGAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSSGLLL*CSRRRT
Trigger: TGTCCTCCTCCTGGAGCAGCAGAGCAACAGGCCTGA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGGCTCCTCACTGGCTGTaGCAGAGGCTACTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVAPHWL*QRLLQP
Trigger: CGGCTGGAGTAGCCTCTGGCACAGCCAGTGAGGAGC...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGACTGGGCAGGGAGTTaGCAGCATGACACCCTTGGT +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSDWAGS*QHDTLG
Trigger: ACCAAGGGTGTCATGCTGGCAACTCCCTGCCCAGTC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACCACCCAGAGAGAAGTTaGCTAGAGCCTTGTATTCAG +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDHPERS*LEPCIQ
Trigger: CTGAATACAAGGCTCTAGGCAACTTCTCTCTGGGTG...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACCAATATATACAGAAATaGAGGCCGGGCACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDQYIQK*RPGTRL
Trigger: CAGCCTTGTGCCCGGCCTGCATTTCTGTATATATTG...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTAGAAGAGCCCCCGCGTaGCCGGTCCAGACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLRRAPA*PVQTQG
Trigger: GCCCTGCGTCTGGACCGGGCACGCGGGGGCTCTTCT...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCACGTCGCAGATGCTGTTaGTCTTGGAGAGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAARRRCC*SWRGCR
Trigger: TCTACATCCTCTCCAAGACCAACAGCATCTGCGACG...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGTCTCCTTCAGGAACTaGTCGATCTGCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPVSFRN*SICTTS
Trigger: GGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGAC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCATTCTCGCATTCTGCCTaGGCCCCGGGCATTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPFSHSA*APGIGS
Trigger: GGACCCAATGCCCGGGGCCCAGGCAGAATGCGAGAA...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGACGGCCGGGCCCACGTaGTGTTCTCGCATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWTAGPT*CSRILP
Trigger: AGGCAGAATGCGAGAACACCACGTGGGCCCGGCCGT...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATAGGGGCCCCCTCCTCTaGCCTGGGCAGCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDRGPLL*PGQLQT
Trigger: AGTCTGGAGCTGCCCAGGCCAGAGGAGGGGGCCCCT...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGACCCCCGTTGGCAGCCTaGGCCCGTGTGCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGPPLAA*ARVPKP
Trigger: GGGCTTGGGCACACGGGCCCAGGCTGCCAACGGGGG...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTGAGCTGCGAGGGGGCTaGGACCGCTCTGAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAELRGG*DRSEPP
Trigger: CGGGGGCTCAGAGCGGTCCCAGCCCCCTCGCAGCTC...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTCACGGCAGTAGCAGCTaGCCAGCCAGAGCGAGCGGT +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLHGSSS*PARASG
Trigger: ACCGCTCGCTCTGGCTGGCCAGCTGCTACTGCCGTG...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGCCCAAATGACCTCATaGCCCACGGGGTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDAQMTS*PTGSVA
Trigger: TGCCACAGACCCCGTGGGCCATGAGGTCATTTGGGC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCTGGCAGGGGTGAAGTaGTGCCACTTGGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDLAGVK*CHLEGD
Trigger: GTCTCCCTCCAAGTGGCACCACTTCACCCCTGCCAG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGTGATCTCTGACACGTaGTCAAGCTCCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPVISDT*SSSRTC
Trigger: GCAGGTCCTGGAGCTTGACCACGTGTCAGAGATCAC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGAGAGTGCCCTGGTGTaGGGCTGGCAGGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTESALV*GWQGPC
Trigger: GCAGGGCCCCTGCCAGCCCCACACCAGGGCACTCTC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTCCAAAGAGAGTGCCCTaGTGTGGGGCTGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLPKRVP*CGAGRG
Trigger: GCCCCTGCCAGCCCCACACCAGGGCACTCTCTTTGG...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGTCCAAGCCCCTGTACTaGGGAGGCAGTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRSKPLY*GGSALG
Trigger: ACCCAGGGCACTGCCTCCCCAGTACAGGGGCTTGGA...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCTGTGACAGGGCTGCCTaGGGCTGGGACCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPCDRAA*GWDLDP
Trigger: AGGGTCAAGGTCCCAGCCCCAGGCAGCCCTGTCACA...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCATGTGACAGGGCTGCCTaGGGCTGGGACCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPCDRAA*GWDLDP
Trigger: AGGGTCAAGGTCCCAGCCCCAGGCAGCCCTGTCACA...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCTGGAGCCAGCTGCTCTaGGGTAGGAGGCAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPWSQLL*GRRQGV
Trigger: CACCCCTTGCCTCCTACCCCAGAGCAGCTGGCTCCA...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGTGGAGCCAGCTGCTCTaGGGTAGGAGGCAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWWSQLL*GRRQGV
Trigger: CACCCCTTGCCTCCTACCCCAGAGCAGCTGGCTCCA...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCAGCACCTCTGGTTCTaGGGTCACAGGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDQHLWF*GHREQE
Trigger: CTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGCGTCAAGGGGCTGGTaGGGCAGGGGCTGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLASRGW*GRGCKA
Trigger: AGCTTTGCAGCCCCTGCCCCACCAGCCCCTTGACGC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGGGATCCCGTTTGGGTaGGTAAAGATGGATGAAGTG +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAGIPFG*VKMDEV
Trigger: CACTTCATCCATCTTTACCCACCCAAACGGGATCCC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCACTGGGACAGGTCCCATaGGTTCGAGTTAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAALGQVP*VRVNFS
Trigger: AGAGAAGTTAACTCGAACCCATGGGACCTGTCCCAG...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCGCATGGCCACTGGGTTaGAGAGAAGGGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAAWPLG*REGPGP
Trigger: GGGGCCTGGCCCTTCTCTCCAACCCAGTGGCCATGC...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACTGCCTTAGCTGGCCCTaGTATTCTGATCTTTACCCA +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDCLSWP*YSDLYP
Trigger: TGGGTAAAGATCAGAATACCAGGGCCAGCTAAGGCA...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCGTGGCAGAGGAGGCTTaGCCTCACGGTGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAVAEEA*PHGGEP
Trigger: AGGCTCCCCACCGTGAGGCCAAGCCTCCTCTGCCAC...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGTGGCAGAGGAGGCTTaGCCTCACGGTGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLVAEEA*PHGGEP
Trigger: AGGCTCCCCACCGTGAGGCCAAGCCTCCTCTGCCAC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGGGCCATGCTGGCAGTaGCAGAGGAGGCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLGPCWQ*QRRLGL
Trigger: GAGGCCAAGCCTCCTCTGCCACTGCCAGCATGGCCC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTAGGCCCCCTGGGGGCTaGAGGTACAGGCACCACTTC +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLRPPGG*RYRHHF
Trigger: GAAGTGGTGCCTGTACCTCCAGCCCCCAGGGGGCCT...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATCCAGGGAAGGCCCCCTaGGGGCTGGAGGTACAGGCA +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDPGKAP*GLEVQA
Trigger: TGCCTGTACCTCCAGCCCCCAGGGGGCCTTCCCTGG...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATAGCAAAGTGCTGGGATaGCGATGCCTGGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDSKVLG*RCLGGA
Trigger: TGCCCCACCCAGGCATCGCCATCCCAGCACTTTGCT...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CAA 72 bp TCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTaGGCAAGGCAGGACCAAGAAATCCAAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SGVTGSRSYRVQ*ARQDQEIQGSQ
Trigger: CTGGCTGCCTTGGATTTCTTGGTCCTGCCTTGCCAACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTCAGGTCCTGCTTGAGTaGGGCCAGCAGCTCTACGCT +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSQVLLE*GQQLYA
Trigger: AGCGTAGAGCTGCTGGCCTCACTCAAGCAGGACCTG...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGCAGGTCCTGCTTGAGTaGGGCCAGCAGCTCTACGCT +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWQVLLE*GQQLYA
Trigger: AGCGTAGAGCTGCTGGCCTCACTCAAGCAGGACCTG...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCAAGGAGCTCCTCAATaGACTGCTGCAGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDQGAPQ*TAAAAA
Trigger: AGCTGCGGCTGCAGCAGTTCATTGAGGAGCTCCTTG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGACTGTCATAGCAGCCTaGGCTCTGGGATGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWTVIAA*ALGCGW
Trigger: CCAGCCGCATCCCAGAGCTCAGGCTGCTATGACAGT...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATGGAGCGTGAGGGGCTaGCCCTCTCTGCTCGCCGAC +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTWSVRG*PSLLAD
Trigger: GTCGGCGAGCAGAGAGGGTCAGCCCCTCACGCTCCA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGACCTCATTGGAGCGTaGGGGGCTGACCCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLDLIGA*GADPLC
Trigger: GCAGAGAGGGTCAGCCCCTCACGCTCCAATGAGGTC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATGCAGGCAGCGGTTACTaGAGCGTGTGGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDAGSGY*SVWAAG
Trigger: GCCAGCAGCCCACACGCTTCAGTAACCGCTGCCTGC...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCTGCCACCTCCTGGGTaGTCTCTGACACGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDLPPPG*SLTRGQ
Trigger: TTGACCACGTGTCAGAGATCACCCAGGAGGTGGCAG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCGGAGGACAGGAGACTTaGCAGTCCCCCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPGGQET*QSPSRS
Trigger: GCTTCTGGAGGGGGACTGTCAAGTCTCCTGTCCTCC...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGGCCAGCCAGAACAGCTaGGGAGCCACTGGGTGGTTA +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVASQNS*GATGWL
Trigger: TAACCACCCAGTGGCTCCTCAGCTGTTCTGGCTGGC...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCCCCAGACAGCCTTGGTaGCCCGAAGGCCATCGGGTT +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPPRQPW*PEGHRV
Trigger: AACCCGATGGCCTTCGGGTCACCAAGGCTGTCTGGG...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAAAAGAACTTTCCAAATaGAAGTTGGCAGGACCCCCG +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAKELSK*KLAGPP
Trigger: CGGGGGTCCTGCCAACTTTCATTTGGAAAGTTCTTT...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCGCTAGGGCTGGGAGCTaGTCCTATCTAGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPARAGS*SYLGEK
Trigger: TTTCTCTCCTAGATAGGATCAGCTCCCAGCCCTAGC...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGCTTTTTCCTGACCCCTaGGGACAGGGCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWLFPDP*GQGWCR
Trigger: CCTGCACCAGCCCTGTCCTCAGGGGTCAGGAAAAAG...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGGGCACAAGGCTGGGTaGGAAAGCATGGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPGHKAG*ESMATG
Trigger: CCCAGTGGCCATGCTTTCTCACCCAGCCTTGTGCCC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCCGGCCGCCTGCTCCTTaGCCTGGAAGGAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQARPPAP*PGRKCS
Trigger: AGAGCACTTCCTTCCAGGGCAAGGAGCAGGCGGCCG...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCAGCGCATAGCGCGCTaGTGCGGCGGGCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAQRIAR*CGGHKA
Trigger: GGCCTTGTGCCCGCCGCAGCAGCGCGCTATGCGCTG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACAGCCTCGCACTCTCCTaGCGCGCAGTCTCCAGTTCG +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHSLALS*RAVSSS
Trigger: CGAACTGGAGACTGCGCGGCAGGAGAGTGCGAGGCT...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCAGCTCCTGTTCCTTGTaGACCAGGTCCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPSSCSL*TRSCLS
Trigger: ACTCAAGCAGGACCTGGTGCACAAGGAACAGGAGCT...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGCCACCTCCTGCTGCTTaGGGCTCAGCTCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWPPPAA*GSAPVP
Trigger: AGGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGG...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTCTCGGAGAGGAGCCATaGCGTGACACTGCATATGTG +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSLGEEP*RDTAYV
Trigger: CACATATGCAGTGTCACGGCATGGCTCCTCTCCGAG...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACACGGCGGGGTCTGCGCTaGCAGTTCTGGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTRRGLR*QFWMAW
Trigger: CCAGGCCATCCAGAACTGGCAGCGCAGACCCCGCCG...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCCAGACCTCGGCAGCATaGAGCAGTGTGCGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPQTSAA*SSVRVS
Trigger: GGACACGCGCACACTGCTGCATGCTGCCGAGGTCTG...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCCAGACCTCGGCAGCATaGAGCAGTGTGCGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAQTSAA*SSVRVS
Trigger: GGACACGCGCACACTGCTGCATGCTGCCGAGGTCTG...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAGAGAGTGGGCCTGGGTaGACCACTGAGCCAGCATTG +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPESGPG*TTEPAL
Trigger: CAATGCTGGCTCAGTGGTGCACCCAGGCCCACTCTC...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCCGGGGCTTCAAGTTCTaGAGCGTCAGAGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPRGFKF*SVREWA
Trigger: GGCCCACTCTCTGACGCTGCAGAACTTGAAGCCCCG...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATTCCTTCTTTCCCCGCTaGCGGGGCTTCAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDSFFPR*RGFKFC
Trigger: GCAGAACTTGAAGCCCCGGCAGCGGGGAAAGAAGGA...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGGAGACGATCTCTCTaGAGCCTGCGCCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLGRRSL*SLRPGP
Trigger: GGGCCCTGGGCGCAGGCTGCAGAGAGATCGTCTCCC...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTCCGGCAGACCTCTGCTaGCACCTCCTGGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLPADLC*HLLGDL
Trigger: GAGATCACCCAGGAGGTGGCAGCAGAGGTCTGCCGG...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCACCTTCCACCTTGATGTaGAGAATCTTAGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAPSTLM*RILEKP
Trigger: CGGCTTCTCTAAGATTCTGCACATCAAGGTGGAAGG...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGAGGTCCAAAGAGAGTaGCCTGGTGTGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWEVQRE*PGVGLA
Trigger: TGCCAGCCCCACACCAGGGCACTCTCTTTGGACCTC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTCTGGGTCAGGCCTGTTaGTCTGCTGCTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSLGQAC*SAAPGG
Trigger: TCCTCCTGGAGCAGCAGAGCAACAGGCCTGACCCAG...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGTGCCCCCAGAAGGCTaGAGCAAGGTTGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDVPPEG*SKVEEK
Trigger: CTTCTCCTCAACCTTGCTGCAGCCTTCTGGGGGCAC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGGGAGCTGGGTGTGCTaGTGCGCCCATGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCGSWVC*CAHGIP
Trigger: TGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGACTGGGCAGGGAGTTaGCAGCATGACACCCTTGGT +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDDWAGS*QHDTLG
Trigger: ACCAAGGGTGTCATGCTGGCAACTCCCTGCCCAGTC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGAAAGAAAGCTGTGCTaGTTTTTCCTGACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAERKLC*FFLTPE
Trigger: CTCAGGGGTCAGGAAAAAGCAGCACAGCTTTCTTTC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAGCAGGAGCTACAGGGTaGAGTTGGCAAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPAGATG*SWQGRT
Trigger: GGTCCTGCCTTGCCAACTGCACCCTGTAGCTCCTGC...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTGCCAGTGCTTGGGCATaGATGAAGGCTAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSASAWA*MKARGH
Trigger: GTGCCCCCTAGCCTTCATGCATGCCCAAGCACTGGC...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCGCCAGTGCTTGGGCATaGATGAAGGCTAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPASAWA*MKARGH
Trigger: GTGCCCCCTAGCCTTCATGCATGCCCAAGCACTGGC...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTCTGCAAAGCTGCCAGTaGTTGGGCATGCATGAAGGC +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSLQSCQ*LGMHEG
Trigger: GCCTTCATGCATGCCCAAGCACTGGCAGCTTTGCAG...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCAGGGGCTGCAAAGCTaGCAGTGCTTGGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDQGLQS*QCLGMH
Trigger: ATGCATGCCCAAGCACTGGCAGCTTTGCAGCCCCTG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTGCACCTTCATTTCCTaGCGGTGCTGTGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSCTFIS*RCCGEA
Trigger: TGCTTCCCCACAGCACCGGCAGGAAATGAAGGTGCA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCTCACGGTGGGGAGCCTaGCTGATTGTCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPSRWGA*LIVRAA
Trigger: GGCTGCCCTGACAATCAGGCAGGCTCCCCACCGTGA...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGTTGCCCACCAGTGGTaGCCACTAGAACCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDVAHQW*PLEPSL
Trigger: CAGGCTTGGTTCTAGTGGGCACCACTGGTGGGCAAC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTTGCAGCCGGCCCACCTaGCCCGCGATCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLCSRPT*PAIFCS
Trigger: GGAGCAGAAGATCGCGGGCCAGGTGGGCCGGCTGCA...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGACGGCTGGCACACGGCTaGAGGCCCCTGTGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGRLAHG*RPLCSE
Trigger: CTCCGAGCACAGGGGCCTCCAGCCGTGTGCCAGCCG...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGCAGCCTCTGACTCAGTaGTTCGGGAGCCAACGTCGG +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRQPLTQ*FGSQRR
Trigger: CCGACGTTGGCTCCCGAACCACTGAGTCAGAGGCTG...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCAGGATGTTTGGACAGTaGGAGATGCGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPRMFGQ*EMRRIS
Trigger: GCTGATCCTGCGCATCTCCCACTGTCCAAACATCCT...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGCTGGCAGGGGTGAAGTaGTGCCACTTGGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVLAGVK*CHLEGD
Trigger: GTCTCCCTCCAAGTGGCACCACTTCACCCCTGCCAG...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTCCCAGGGCCCGCAGGTaGGGCCAACAGCGACCAATC +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLPRARR*GQQRPI
Trigger: GATTGGTCGCTGTTGGCCCCACCTGCGGGCCCTGGG...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGTCCTCAAACAGCTTCTaGGCCTCAGGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWSSNSF*ASGLLG
Trigger: GCCCAGCAGCCCTGAGGCCCAGAAGCTGTTTGAGGA...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGTGTGGATCCACAGCCTaGGCAGGCTGTCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRCGSTA*AGCLKG
Trigger: CCCCTTCAGACAGCCTGCCCAGGCTGTGGATCCACA...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGGCAATCCCCCACCTTaGAAGGGTGGTCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDGNPPP*KGGLIL
Trigger: CAGGATGAGACCACCCTTCCAAGGTGGGGGATTGCC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATAGTCCACGGGGCCCGTaGAGACCAAGGAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDSPRGP*RPRKGE
Trigger: CTCCCCCTTCCTTGGTCTCCACGGGCCCCGTGGACT...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGGAGACCTCAGCCTTTaGAGCCTTGGTTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSGDLSL*SLGSET
Trigger: GGTCTCAGAACCAAGGCTCCAAAGGCTGAGGTCTCC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCTGGAGCCAGCTGCTCTaGGGTAGGAGGCAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAWSQLL*GRRQGV
Trigger: CACCCCTTGCCTCCTACCCCAGAGCAGCTGGCTCCA...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGCAGCACCTCTGGTTCTaGGGTCACAGGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRQHLWF*GHREQE
Trigger: CTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTG...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGGGAAGGCAGCACCTCTaGTTCTGGGGTCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVGRQHL*FWGHRE
Trigger: CTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTTCC...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGGTAGAAACACCAAGTaGCCACCCCCACTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWGRNTK*PPPLGL
Trigger: GAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTGGTAGAAACACCAAGTaGCCACCCCCACTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSGRNTK*PPPLGL
Trigger: GAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCGTACTGGGGCCAGACTaGATGGCAGGGGGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPVLGPD*MAGGGR
Trigger: TCTACCACCCCCTGCCATCCAGTCTGGCCCCAGTAC...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGGTGGTCTCTCCTGGCTaGGGAAAGGCTGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVVVSPG*GKAVVL
Trigger: CAGCACCACAGCCTTTCCCCAGCCAGGAGAGACCAC...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGGCCGGGCACAAGGCTaGGTGAGAAAGCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPGRAQG*VRKHGH
Trigger: GTGGCCATGCTTTCTCACCCAGCCTTGTGCCCGGCC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGGCTTGGCCTCACGGTaGGGAGCCTGCCTGATTGTC +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLGLASR*GACLIV
Trigger: GACAATCAGGCAGGCTCCCCACCGTGAGGCCAAGCC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGATGGCGATGCCTGGGTaGGGCAGAGAAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWMAMPG*GREVWP
Trigger: TGGCCACACTTCTCTGCCCCACCCAGGCATCGCCAT...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCAGCAAAGTGCTGGGATaGCGATGCCTGGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPSKVLG*RCLGGA
Trigger: TGCCCCACCCAGGCATCGCCATCCCAGCACTTTGCT...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACGCACCAGGTCCTGCTTaGGTGAGGCCAGCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHAPGPA*VRPAAL
Trigger: TAGAGCTGCTGGCCTCACTCAAGCAGGACCTGGTGC...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGCAAGGAGCTCCTCAATaGACTGCTGCAGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWQGAPQ*TAAAAA
Trigger: AGCTGCGGCTGCAGCAGTTCATTGAGGAGCTCCTTG...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTAGAGGAGCCATGCCGTaGCACTGCATATGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSRGAMP*HCICVR
Trigger: CCTAACACATATGCAGTGTCACGGCATGGCTCCTCT...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTACTGTCATAGCAGCCTaGGCTCTGGGATGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLTVIAA*ALGCGW
Trigger: CCAGCCGCATCCCAGAGCTCAGGCTGCTATGACAGT...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGACCTCATTGGAGCGTaGGGGGCTGACCCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCDLIGA*GADPLC
Trigger: GCAGAGAGGGTCAGCCCCTCACGCTCCAATGAGGTC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATGGCACTCCTGTACGTaGCAGCCTGCAGGGCACGGC +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTWHSCT*QPAGHG
Trigger: GCCGTGCCCTGCAGGCTGTCACGTACAGGAGTGCCA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACTCCTGGGTGATCTCTaGCACGTGGTCAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPLLGDL*HVVKLQ
Trigger: CTGGAGCTTGACCACGTGTCAGAGATCACCCAGGAG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGAAACCAGGGTCCCTCTaGGGTCCAAAGAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRKPGSL*GPKRVP
Trigger: GGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTT...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGGAGGACAGGAGACTTaGCAGTCCCCCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPGGQET*QSPSRS
Trigger: GCTTCTGGAGGGGGACTGTCAAGTCTCCTGTCCTCC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGAACTACTTCTCACTGTaGCAGGGCTGCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVNYFSL*QGCLGL
Trigger: CAGCCCCAGGCAGCCCTGTCACAGTGAGAAGTAGTT...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCTACTGTGGGAGTTCTaGGAGGAGGAACTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDLLWEF*EEELGR
Trigger: TCTCCCCAGTTCCTCCTCTCAGAACTCCCACAGTAG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCTGTGCTGCTTTTTCCTaGCCCCTGAGGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPCAAFS*PLRTGL
Trigger: CAGCCCTGTCCTCAGGGGTCAGGAAAAAGCAGCACA...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCATGTGCTGCTTTTTCCTaGCCCCTGAGGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPCAAFS*PLRTGL
Trigger: CAGCCCTGTCCTCAGGGGTCAGGAAAAAGCAGCACA...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGTGCTTGGGCATGCATaGAGGCTAGGGGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWVLGHA*RLGGTS
Trigger: ACTTGTGCCCCCTAGCCTTCATGCATGCCCAAGCAC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATAGGGCATCTTACGGGTaGCATGGAGCAAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDRASYG*HGAKCW
Trigger: CCAGCACTTTGCTCCATGTCACCCGTAAGATGCCCT...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTCGGCGCCGTCGCAGATaGTGTTGGTCTTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLRRRRR*CWSWRG
Trigger: TCCTCTCCAAGACCAACAGCATCTGCGACGGCGCCG...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATCGGCCGCCTGCTCCTTaGCCTGGAAGGAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDRPPAP*PGRKCS
Trigger: AGAGCACTTCCTTCCAGGGCAAGGAGCAGGCGGCCG...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAAGGACGCCACGGACTTaGGGGCGAACAGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTRTPRT*GRTAPP
Trigger: TGGGGGAGCTGTTCGCCCGCAAGTCCGTGGCGTCCT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAGCCTCGCACTCTCCTaGCGCGCAGTCTCCAGTTCG +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCSLALS*RAVSSS
Trigger: CGAACTGGAGACTGCGCGGCAGGAGAGTGCGAGGCT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCCCACCTCCTGCTGCTTaGGGCTCAGCTCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPPPPAA*GSAPVP
Trigger: AGGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGG...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACTGCACCACCTCCTGCTaGTTGCGGCTCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHCTTSC*LRLSSC
Trigger: ACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGGTGCA...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTTGCACCACCTCCTGCTaGTTGCGGCTCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLCTTSC*LRLSSC
Trigger: ACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGGTGCA...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGTCCTCAATGAACTGCTaGAGCCGCAGCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWSSMNC*SRSLAL
Trigger: CAGCGCCAAGCTGCGGCTGCAGCAGTTCATTGAGGA...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATTGTGTCGGCGGGGTCTaGGCTGCCAGTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDCVGGV*AASSGW
Trigger: CCATCCAGAACTGGCAGCGCAGACCCCGCCGACACA...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCGGGGCTTCAAGTTCTaGAGCGTCAGAGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHRGFKF*SVREWA
Trigger: GGCCCACTCTCTGACGCTGCAGAACTTGAAGCCCCG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGTCCTTCTTTCCCCGCTaGCGGGGCTTCAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVSFFPR*RGFKFC
Trigger: GCAGAACTTGAAGCCCCGGCAGCGGGGAAAGAAGGA...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGGACCTGCAGCCGCATaGAGTTTCTCGCGAGTGATG +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRGPAAA*SFSRVM
Trigger: CATCACTCGCGAGAAACTGCATGCGGCTGCAGGTCC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATTCAAGCTCCAGGACCTaGAGCCGCATGCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDSSSRT*SRMQFL
Trigger: GAGAAACTGCATGCGGCTGCAGGTCCTGGAGCTTGA...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCCCGGCAGACCTCTGCTaGCACCTCCTGGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCPADLC*HLLGDL
Trigger: GAGATCACCCAGGAGGTGGCAGCAGAGGTCTGCCGG...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGAGGTCCAAAGAGAGTaGCCTGGTGTGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLEVQRE*PGVGLA
Trigger: TGCCAGCCCCACACCAGGGCACTCTCTTTGGACCTC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCATCAGGCCTGTTGCTCTaGTGCTCCAGGAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPSGLLL*CSRRRT
Trigger: TGTCCTCCTCCTGGAGCAGCAGAGCAACAGGCCTGA...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCCTGGGTCAGGCCTGTTaGTCTGCTGCTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQALGQAC*SAAPGG
Trigger: TCCTCCTGGAGCAGCAGAGCAACAGGCCTGACCCAG...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATGCTCCTCACTGGCTGTaGCAGAGGCTACTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDAPHWL*QRLLQP
Trigger: CGGCTGGAGTAGCCTCTGGCACAGCCAGTGAGGAGC...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGTGCCCCCAGAAGGCTaGAGCAAGGTTGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRVPPEG*SKVEEK
Trigger: CTTCTCCTCAACCTTGCTGCAGCCTTCTGGGGGCAC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGGAGCTGGGTGTGCTaGTGCGCCCATGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLGSWVC*CAHGIP
Trigger: TGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCC...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGGACTGGGCAGGGAGTTaGCAGCATGACACCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVDWAGS*QHDTLG
Trigger: ACCAAGGGTGTCATGCTGGCAACTCCCTGCCCAGTC...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCTGTCAGCCCCAGGGTaGGTGTGCAATGGAATACTC +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDLSAPG*VCNGIL
Trigger: GAGTATTCCATTGCACACGCACCCTGGGGCTGACAG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCGCCAGTGCTTGGGCATaGATGAAGGCTAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAASAWA*MKARGH
Trigger: GTGCCCCCTAGCCTTCATGCATGCCCAAGCACTGGC...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTGGTGGGGCAGGGGCTaGAAAGCTGCCAGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCWWGRG*KAASAW
Trigger: CCAAGCACTGGCAGCTTTGCAGCCCCTGCCCCACCA...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTTGGGGAGGGAGTCGTTaGCTTAGCTGGCCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSWGGSR*LSWPWY
Trigger: ATACCAGGGCCAGCTAAGGCAACGACTCCCTCCCCA...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATTCACGGTGGGGAGCCTaGCTGATTGTCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDSRWGA*LIVRAA
Trigger: GGCTGCCCTGACAATCAGGCAGGCTCCCCACCGTGA...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTCACGGTGGGGAGCCTaGCTGATTGTCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCSRWGA*LIVRAA
Trigger: GGCTGCCCTGACAATCAGGCAGGCTCCCCACCGTGA...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGTTGCCCACCAGTGGTaGCCACTAGAACCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRVAHQW*PLEPSL
Trigger: CAGGCTTGGTTCTAGTGGGCACCACTGGTGGGCAAC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCGCCAGTTATGGAGGTTaGCCACCAGTGGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPASYGG*PPVVPT
Trigger: AGTGGGCACCACTGGTGGGCAACCTCCATAACTGGC...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAACGCTCACGTCCACCTaGCGGGAGAGCTCAGACGCG +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTTLTST*RESSDA
Trigger: CGCGTCTGAGCTCTCCCGCCAGGTGGACGTGAGCGT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATACGGCCGGGCCCACGTaGTGTTCTCGCATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDTAGPT*CSRILP
Trigger: AGGCAGAATGCGAGAACACCACGTGGGCCCGGCCGT...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTGCTGCCAGTTCTGGATaGCCTGGCGCCGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAAASSG*PGAAGL
Trigger: CAGGCCTGCGGCGCCAGGCCATCCAGAACTGGCAGC...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGCATTGCCAGGAACTTaGAGCAGACACGGGCATTCT +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSALPGT*SRHGHS
Trigger: AGAATGCCCGTGTCTGCTCCAAGTTCCTGGCAATGC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTCACGGCAGTAGCAGCTaGCCAGCCAGAGCGAGCGGT +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLHGSSS*PARASG
Trigger: ACCGCTCGCTCTGGCTGGCCAGCTGCTACTGCCGTG...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTTCCTCAAACAGCTTCTaGGCCTCAGGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLSSNSF*ASGLLG
Trigger: GCCCAGCAGCCCTGAGGCCCAGAAGCTGTTTGAGGA...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACACCAAAGAGAGTGCCCTaGTGTGGGGCTGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTPKRVP*CGAGRG
Trigger: GCCCCTGCCAGCCCCACACCAGGGCACTCTCTTTGG...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTCCAAGCCCCTGTACTaGGGAGGCAGTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCSKPLY*GGSALG
Trigger: ACCCAGGGCACTGCCTCCCCAGTACAGGGGCTTGGA...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAGTGACAGCTCCTCACTaGCTGTGCCAGAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPVTAPH*LCQRLL
Trigger: GAGTAGCCTCTGGCACAGCCAGTGAGGAGCTGTCAC...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACTGTGGATCCACAGCCTaGGCAGGCTGTCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHCGSTA*AGCLKG
Trigger: CCCCTTCAGACAGCCTGCCCAGGCTGTGGATCCACA...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGTACCCCCAGGAAATGTaGATCCACAGCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVYPQEM*IHSLGR
Trigger: CCTGCCCAGGCTGTGGATCCACATTTCCTGGGGGTA...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGGGCTTTGTGCAGGACTaGGCAGGGAGTTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVGFVQD*AGSCQH
Trigger: ATGCTGGCAACTCCCTGCCCAGTCCTGCACAAAGCC...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTGGCTTTGTGCAGGACTaGGCAGGGAGTTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSGFVQD*AGSCQH
Trigger: ATGCTGGCAACTCCCTGCCCAGTCCTGCACAAAGCC...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGGAAGGCAGCACCTCTaGTTCTGGGGTCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLGRQHL*FWGHRE
Trigger: CTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTTCC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACGGAAGGCAGCACCTCTaGTTCTGGGGTCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHGRQHL*FWGHRE
Trigger: CTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTTCC...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGGGATGGAAGGTCCCTaGGGCAGAGAAAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSGMEGP*GRENPS
Trigger: TGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCCC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTTGGGGCCAGACTGGATaGCAGGGGGTGGTAGAAACA +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSWGQTG*QGVVET
Trigger: TGTTTCTACCACCCCCTGCCATCCAGTCTGGCCCCA...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGTGGGGCCAGACTGGATaGCAGGGGGTGGTAGAAACA +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWWGQTG*QGVVET
Trigger: TGTTTCTACCACCCCCTGCCATCCAGTCTGGCCCCA...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGTACTGGGGCCAGACTaGATGGCAGGGGGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPVLGPD*MAGGGR
Trigger: TCTACCACCCCCTGCCATCCAGTCTGGCCCCAGTAC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTTCCTGCCGGTGCTGTaGGGAAGCAGCCTGAATAAA +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSFLPVL*GSSLNK
Trigger: TTTATTCAGGCTGCTTCCCCACAGCACCGGCAGGAA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCAATTCCTGAGGGGCTaGCTCAGACTCGAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDQFLRG*LRLECH
Trigger: GTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCCAGGGACTGACAGGCTaGGACAGGTCCCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPQGLTG*DRSHGF
Trigger: GAACCCATGGGACCTGTCCCAGCCTGTCAGTCCCTG...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGCATGGCCACTGGGTTaGAGAGAAGGGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTAWPLG*REGPGP
Trigger: GGGGCCTGGCCCTTCTCTCCAACCCAGTGGCCATGC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGGCCGGGCACAAGGCTaGGTGAGAAAGCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCGRAQG*VRKHGH
Trigger: GTGGCCATGCTTTCTCACCCAGCCTTGTGCCCGGCC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAGAGGTCCCAAGGGTTTaGGGAGGGAGTCGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPEVPRV*GGSRCL
Trigger: AAGGCAACGACTCCCTCCCCAAACCCTTGGGACCTC...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCGGGCAGCCTTGGGACTaGCTGAGGTCCCAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAGQPWD*LRSQGF
Trigger: AAACCCTTGGGACCTCAGCCAGTCCCAAGGCTGCCC...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGGGCCATGCTGGCAGTaGCAGAGGAGGCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTGPCWQ*QRRLGL
Trigger: GAGGCCAAGCCTCCTCTGCCACTGCCAGCATGGCCC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCCTAAGGGCCAGTTATaGAGGTTGCCCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDPKGQL*RLPTSG
Trigger: ACCACTGGTGGGCAACCTCCATAACTGGCCCTTAGG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACATGGAGCAAAGTGCTaGGATGGCGATGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPHGAKC*DGDAWV
Trigger: CACCCAGGCATCGCCATCCCAGCACTTTGCTCCATG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGACGCAGGGCCGCCTTaGGGCCTCGGATCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGDAGPP*GLGSRS
Trigger: GGAACGAGATCCGAGGCCCCAAGGCGGCCCTGCGTC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520530.3
ENST00000521871.5
3UTR CAA 72 bp CTGTTGCTCTGCTGCTCCAGGAGGAGGACAGGAGACTaGACAGTCCCCCTCCAGAAGCCAGGGATAACACTC +
Preference number: 4 (lower is better)
Translates to: LLLCCSRRRTGD*TVPLQKPGITL
Trigger: GAGTGTTATCCCTGGCTTCTGGAGGGGGACTGTCAAGTCTCCTGTCCTCCTCCTGGAGCAGCAGAGCAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTCAAGGAGCTCCTCAATaGACTGCTGCAGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLQGAPQ*TAAAAA
Trigger: AGCTGCGGCTGCAGCAGTTCATTGAGGAGCTCCTTG...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATAGAGGAGCCATGCCGTaGCACTGCATATGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDRGAMP*HCICVR
Trigger: CCTAACACATATGCAGTGTCACGGCATGGCTCCTCT...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGCGTGTCCAGGTAGGTaGAGATGCAGAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPACPGR*RCRRGQ
Trigger: CTGCCCTCTTCTGCATCTTCACCTACCTGGACACGC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAGAGCGAGCGGTCGGTaGGGATGTTTGGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCRASGR*GCLDSG
Trigger: CCCACTGTCCAAACATCCTCACCGACCGCTCGCTCT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCCTCCTGGGTGATCTCTaGCACGTGGTCAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPLLGDL*HVVKLQ
Trigger: CTGGAGCTTGACCACGTGTCAGAGATCACCCAGGAG...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTAAACCAGGGTCCCTCTaGGGTCCAAAGAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLKPGSL*GPKRVP
Trigger: GGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTT...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGACAGAGCTAGGGAGTaGCGCCATGGGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTDRARE*RHGSWV
Trigger: CACCCAGCTCCCATGGCGTCACTCCCTAGCTCTGTC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGTGCTTGGGCATGCATaGAGGCTAGGGGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPVLGHA*RLGGTS
Trigger: ACTTGTGCCCCCTAGCCTTCATGCATGCCCAAGCAC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCTGCCCTGGAAGGAAGTaGTCTCGAAGACCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQACPGRK*SRRPLA
Trigger: GGCGAGAGGTCTTCGAGAGCACTTCCTTCCAGGGCA...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTAGGACGCCACGGACTTaGGGGCGAACAGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSARTPRT*GRTAPP
Trigger: TGGGGGAGCTGTTCGCCCGCAAGTCCGTGGCGTCCT...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACTCCTCAATGAACTGCTaGAGCCGCAGCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHSSMNC*SRSLAL
Trigger: CAGCGCCAAGCTGCGGCTGCAGCAGTTCATTGAGGA...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGGTGTTCTCGCATTCTaGCTGGGCCCCGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTGVLAF*LGPGHW
Trigger: CCAATGCCCGGGGCCCAGGCAGAATGCGAGAACACC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGTTGGACAGTGGGAGATaGGCAGGATCAGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWLDSGR*AGSAGS
Trigger: GGAACCTGCTGATCCTGCGCATCTCCCACTGTCCAA...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGTCAAGCTCCAGGACCTaGAGCCGCATGCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRSSSRT*SRMQFL
Trigger: GAGAAACTGCATGCGGCTGCAGGTCCTGGAGCTTGA...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATTTCCCGGCAGACCTCTaGTGCCACCTCCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDFPADL*CHLLGD
Trigger: ATCACCCAGGAGGTGGCAGCAGAGGTCTGCCGGGAA...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGGCTGTCTGAAGGGGTaGCCCCAGAAGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTGCLKG*PQKAAA
Trigger: TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGGCCATCGGGTTCCTaGCCAAGCACCTGGATTAGA +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPRPSGS*PSTWIR
Trigger: TCTAATCCAGGTGCTTGGGCAGGAACCCGATGGCCT...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACGTAGGAGGCAAGGGGTaGCACACACAGCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHVGGKG*HTQPRL
Trigger: AAGCCTTGGCTGTGTGTGGCACCCCTTGCCTCCTAC...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACTGTCAGCCCCAGGGTaGGTGTGCAATGGAATACTC +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPLSAPG*VCNGIL
Trigger: GAGTATTCCATTGCACACGCACCCTGGGGCTGACAG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATGGTGGGGCAGGGGCTaGAAAGCTGCCAGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTWWGRG*KAASAW
Trigger: CCAAGCACTGGCAGCTTTGCAGCCCCTGCCCCACCA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCTGGAGCAGGGCTGCTTaGTCTCAGATATTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPWSRAA*SQIFLS
Trigger: AGAAAGGAATATCTGAGAGCAAGCAGCCCTGCTCCA...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCTGGGGAGGGAGTCGTTaGCTTAGCTGGCCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPWGGSR*LSWPWY
Trigger: ATACCAGGGCCAGCTAAGGCAACGACTCCCTCCCCA...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGTCACCTCAGGCCTCTaGCCTGGATACAAGACCCTT +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWVTSGL*PGYKTL
Trigger: AAGGGTCTTGTATCCAGGGCAGAGGCCTGAGGTGAC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGCCAGTTATGGAGGTTaGCCACCAGTGGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLASYGG*PPVVPT
Trigger: AGTGGGCACCACTGGTGGGCAACCTCCATAACTGGC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATGCCCAAATGACCTCATaGCCCACGGGGTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDAQMTS*PTGSVA
Trigger: TGCCACAGACCCCGTGGGCCATGAGGTCATTTGGGC...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTCCGCAATCCCAATCTaGACCACAATGGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSSAIPI*TTMDLR
Trigger: CCTCAAGTCCATTGTGGTCCAGATTGGGATTGCGGA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACTCCGTCGCAGAGCCTaGAGTTTTGTCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPLRRRA*SFVTMS
Trigger: GGACATGGTGACAAAACTCCAGGCTCTGCGACGGAG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCCAAAGAGAGTGCCCTaGTGTGGGGCTGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAPKRVP*CGAGRG
Trigger: GCCCCTGCCAGCCCCACACCAGGGCACTCTCTTTGG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTAGGGTGGTCTCATCCTaGGGAGAAGTTCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSRVVSS*GEVLGD
Trigger: GTCACCCAGAACTTCTCCCCAGGATGAGACCACCCT...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACAGCTCTGGTGTGCGGTaGGGTATGAGGTTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHSSGVR*GMRLGG
Trigger: TCCTCCCAACCTCATACCCCACCGCACACCAGAGCT...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTAGGGCTGCCTGGGGCTaGGACCTTGACCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSARAAWG*DLDPLE
Trigger: CTCCAGAGGGTCAAGGTCCCAGCCCCAGGCAGCCCT...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGTCTGAGAGGAGGAACTaGGGAGACCTCAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWSERRN*GDLSLW
Trigger: CCAAAGGCTGAGGTCTCCCCAGTTCCTCCTCTCAGA...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCAGGAAGTTGGGTCCCTaGGAAGGACTGGGTAACGAG +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPRKLGP*EGLGNE
Trigger: CTCGTTACCCAGTCCTTCCCAGGGACCCAACTTCCT...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGTGCTGCTGCGCCCATaGGATCCCAGCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLVLLRP*DPSSGG
Trigger: TCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCAC...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCCAGCACCTCTGGTTCTaGGGTCACAGGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCQHLWF*GHREQE
Trigger: CTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTG...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCAGAAAATCCTTCAGTTaGGCAGGCTCAAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPRKSFS*AGSSQA
Trigger: TGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCT...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGCCTTGTATTCAGGGATaGAAGGTCCCTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVPCIQG*KVPGAE
Trigger: CTCTGCCCCAGGGACCTTCCATCCCTGAATACAAGG...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACCTTGTATTCAGGGATaGAAGGTCCCTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPPCIQG*KVPGAE
Trigger: CTCTGCCCCAGGGACCTTCCATCCCTGAATACAAGG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATTTCCTGCCGGTGCTGTaGGGAAGCAGCCTGAATAAA +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDFLPVL*GSSLNK
Trigger: TTTATTCAGGCTGCTTCCCCACAGCACCGGCAGGAA...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGCCTTGATCCTTAGGTaGTCTCTCCTGGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWALILR*SLLAGE
Trigger: TTCCCCAGCCAGGAGAGACCACCTAAGGATCAAGGC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCCAATTCCTGAGGGGCTaGCTCAGACTCGAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPQFLRG*LRLECH
Trigger: GTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTG...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTCTGGGACAGGTCCCATaGGTTCGAGTTAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSLGQVP*VRVNFS
Trigger: AGAGAAGTTAACTCGAACCCATGGGACCTGTCCCAG...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCTGGGTGAGAAAGCATaGCCACTGGGTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDLGEKA*PLGWRE
Trigger: TTCTCTCCAACCCAGTGGCCATGCTTTCTCACCCAG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGAGGTCCCAAGGGTTTaGGGAGGGAGTCGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLEVPRV*GGSRCL
Trigger: AAGGCAACGACTCCCTCCCCAAACCCTTGGGACCTC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTCTCAGGCCTCTGCCCTaGATACAAGACCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSLRPLP*IQDPCQ
Trigger: CTGACAAGGGTCTTGTATCCAGGGCAGAGGCCTGAG...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAAGGCCCCCTGGGGGCTaGAGGTACAGGCACCACTTC +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGRPPGG*RYRHHF
Trigger: GAAGTGGTGCCTGTACCTCCAGCCCCCAGGGGGCCT...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATATGGCGATGCCTGGGTaGGGCAGAGAAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDMAMPG*GREVWP
Trigger: TGGCCACACTTCTCTGCCCCACCCAGGCATCGCCAT...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAGCAAAGTGCTGGGATaGCGATGCCTGGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCSKVLG*RCLGGA
Trigger: TGCCCCACCCAGGCATCGCCATCCCAGCACTTTGCT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCATGGAGCAAAGTGCTaGGATGGCGATGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHHGAKC*DGDAWV
Trigger: CACCCAGGCATCGCCATCCCAGCACTTTGCTCCATG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTCATGGAGCAAAGTGCTaGGATGGCGATGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLHGAKC*DGDAWV
Trigger: CACCCAGGCATCGCCATCCCAGCACTTTGCTCCATG...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGCACCAGGTCCTGCTTaGGTGAGGCCAGCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTAPGPA*VRPAAL
Trigger: TAGAGCTGCTGGCCTCACTCAAGCAGGACCTGGTGC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGGACCACAATGGACTTaGGGTTCCGGCAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPGPQWT*GSGRCC
Trigger: ACAGCATCTGCCGGAACCTCAAGTCCATTGTGGTCC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAAACCAGGGTCCCTCTaGGGTCCAAAGAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCKPGSL*GPKRVP
Trigger: GGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCATTGGAGCCTTGGTTCTaGGACCTGATCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPLEPWF*DLILWG
Trigger: TCCCCAAAGGATCAGGTCTCAGAACCAAGGCTCCAA...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAAGGACCCCCGGCCTCTaGGCTACTGTGGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGRTPGL*ATVGVL
Trigger: CAGAACTCCCACAGTAGCTCAGAGGCCGGGGGTCCT...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGCTAGGGCTGGGAGCTaGTCCTATCTAGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWARAGS*SYLGEK
Trigger: TTTCTCTCCTAGATAGGATCAGCTCCCAGCCCTAGC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTCTTTTTCCTGACCCCTaGGGACAGGGCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLLFPDP*GQGWCR
Trigger: CCTGCACCAGCCCTGTCCTCAGGGGTCAGGAAAAAG...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTGTGCTGCTTTTTCCTaGCCCCTGAGGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCCAAFS*PLRTGL
Trigger: CAGCCCTGTCCTCAGGGGTCAGGAAAAAGCAGCACA...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAACTGGGTATGAGATGTaGAGGGATCCCGTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPTGYEM*RDPVWV
Trigger: CACCCAAACGGGATCCCTTCACATCTCATACCCAGT...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGACTGGGTATGAGATGTaGAGGGATCCCGTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRTGYEM*RDPVWV
Trigger: CACCCAAACGGGATCCCTTCACATCTCATACCCAGT...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACAGGGCATCTTACGGGTaGCATGGAGCAAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHRASYG*HGAKCW
Trigger: CCAGCACTTTGCTCCATGTCACCCGTAAGATGCCCT...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCAGCTCCTGTTCCTTGTaGACCAGGTCCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPSSCSL*TRSCLS
Trigger: ACTCAAGCAGGACCTGGTGCACAAGGAACAGGAGCT...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGAGCTCCTGTTCCTTGTaGACCAGGTCCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVSSCSL*TRSCLS
Trigger: ACTCAAGCAGGACCTGGTGCACAAGGAACAGGAGCT...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCAGGAACTGGTCGATCTaGACCACCTCCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQARNWSI*TTSCCL
Trigger: CAAGCAGCAGGAGGTGGTGCAGATCGACCAGTTCCT...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTGGTGTTCTCGCATTCTaGCTGGGCCCCGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAGVLAF*LGPGHW
Trigger: CCAATGCCCGGGGCCCAGGCAGAATGCGAGAACACC...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTCCACTGAGCCAGCATTaGCAGGAACTTGGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLPLSQH*QELGAD
Trigger: GTCTGCTCCAAGTTCCTGGCAATGCTGGCTCAGTGG...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCCAGCGACCAATCATCTaGAGGCAGCGGTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPQRPII*RQRLLK
Trigger: CTTCAGTAACCGCTGCCTGCAGATGATTGGTCGCTG...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACAGCGACCAATCATCTaGAGGCAGCGGTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPQRPII*RQRLLK
Trigger: CTTCAGTAACCGCTGCCTGCAGATGATTGGTCGCTG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTTTCCCGGCAGACCTCTaGTGCCACCTCCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLFPADL*CHLLGD
Trigger: ATCACCCAGGAGGTGGCAGCAGAGGTCTGCCGGGAA...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTTTGCCAAGTCTGAGCTaGCTTGTGGAGCCCCCATTG +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLLPSLS*LVEPPL
Trigger: CAATGGGGGCTCCACAAGGCAGCTCAGACTTGGCAA...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCTTGCCAAGTCTGAGCTaGCTTGTGGAGCCCCCATTG +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQALPSLS*LVEPPL
Trigger: CAATGGGGGCTCCACAAGGCAGCTCAGACTTGGCAA...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGGCTGTCTGAAGGGGTaGCCCCAGAAGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGGCLKG*PQKAAA
Trigger: TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCATGGGAGCTGGGTGTaGTGCTGCGCCCATGGGATC +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAHGSWV*CCAHGI
Trigger: GATCCCATGGGCGCAGCAGCACACCCAGCTCCCATG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGCAGGAGCTACAGGGTaGAGTTGGCAAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLAGATG*SWQGRT
Trigger: GGTCCTGCCTTGCCAACTGCACCCTGTAGCTCCTGC...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCTGCAAAGCTGCCAGTaGTTGGGCATGCATGAAGGC +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHLQSCQ*LGMHEG
Trigger: GCCTTCATGCATGCCCAAGCACTGGCAGCTTTGCAG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACCAGATATTCCTTTCTTaGATCTTACTGGGTATGAGA +
Preference number: 4 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDQIFLS*ILLGMR
Trigger: TCTCATACCCAGTAAGATGCAAGAAAGGAATATCTG...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTGGAGCAGGGCTGCTTaGTCTCAGATATTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSWSRAA*SQIFLS
Trigger: AGAAAGGAATATCTGAGAGCAAGCAGCCCTGCTCCA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCTGCACCTTCATTTCCTaGCGGTGCTGTGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPCTFIS*RCCGEA
Trigger: TGCTTCCCCACAGCACCGGCAGGAAATGAAGGTGCA...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTTGCACCTTCATTTCCTaGCGGTGCTGTGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLCTFIS*RCCGEA
Trigger: TGCTTCCCCACAGCACCGGCAGGAAATGAAGGTGCA...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTGGGGAGGGAGTCGTTaGCTTAGCTGGCCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCWGGSR*LSWPWY
Trigger: ATACCAGGGCCAGCTAAGGCAACGACTCCCTCCCCA...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGCCAGTTATGGAGGTTaGCCACCAGTGGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCASYGG*PPVVPT
Trigger: AGTGGGCACCACTGGTGGGCAACCTCCATAACTGGC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGTCTCCTTCAGGAACTaGTCGATCTGCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPVSFRN*SICTTS
Trigger: GGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGAC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGATTCTCGCATTCTGCCTaGGCCCCGGGCATTGGGTCC +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGFSHSA*APGIGS
Trigger: GGACCCAATGCCCGGGGCCCAGGCAGAATGCGAGAA...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACACAGCCTCTGACTCAGTaGTTCGGGAGCCAACGTCGG +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTQPLTQ*FGSQRR
Trigger: CCGACGTTGGCTCCCGAACCACTGAGTCAGAGGCTG...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTGCATTGCCAGGAACTTaGAGCAGACACGGGCATTCT +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSALPGT*SRHGHS
Trigger: AGAATGCCCGTGTCTGCTCCAAGTTCCTGGCAATGC...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCAGGATGTTTGGACAGTaGGAGATGCGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPRMFGQ*EMRRIS
Trigger: GCTGATCCTGCGCATCTCCCACTGTCCAAACATCCT...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGTCGGTGAGGATGTTTaGACAGTGGGAGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPVGEDV*TVGDAQ
Trigger: CTGCGCATCTCCCACTGTCCAAACATCCTCACCGAC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGCAGCTGAGGAGCCACTaGGTGGTTATTGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVQLRSH*VVIADP
Trigger: AGGATCTGCAATAACCACCCAGTGGCTCCTCAGCTG...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAAAGCCACCCTCCTCCTaGCTTCCTCCACGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGKPPSS*LPPRPQ
Trigger: CTGAGGCCGTGGAGGAAGCCAGGAGGAGGGTGGCTT...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTTCTGAGAGGAGGAACTaGGGAGACCTCAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLSERRN*GDLSLW
Trigger: CCAAAGGCTGAGGTCTCCCCAGTTCCTCCTCTCAGA...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCAGGAAGTTGGGTCCCTaGGAAGGACTGGGTAACGAG +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPRKLGP*EGLGNE
Trigger: CTCGTTACCCAGTCCTTCCCAGGGACCCAACTTCCT...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGCTACAGGGTGCAGTTaGCAAGGCAGGACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWATGCS*QGRTKK
Trigger: TTTCTTGGTCCTGCCTTGCCAACTGCACCCTGTAGC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGGGATGGAAGGTCCCTaGGGCAGAGAAAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRGMEGP*GRENPS
Trigger: TGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCCC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGGTAGAAACACCAAGTaGCCACCCCCACTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTGRNTK*PPPLGL
Trigger: GAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGTACTGGGGCCAGACTaGATGGCAGGGGGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTVLGPD*MAGGGR
Trigger: TCTACCACCCCCTGCCATCCAGTCTGGCCCCAGTAC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTTTCCTGCCGGTGCTGTaGGGAAGCAGCCTGAATAAA +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSFLPVL*GSSLNK
Trigger: TTTATTCAGGCTGCTTCCCCACAGCACCGGCAGGAA...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGACTTCTCTGGGCATTTaGGCCTTACACCCACTCACC +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVTSLGI*ALHPLT
Trigger: GGTGAGTGGGTGTAAGGCCCAAATGCCCAGAGAAGT...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGACTTCTCTGGGCATTTaGGCCTTACACCCACTCACC +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRTSLGI*ALHPLT
Trigger: GGTGAGTGGGTGTAAGGCCCAAATGCCCAGAGAAGT...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCAGAAAGCATGGCCACTaGGTTGGAGAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPRKHGH*VGEKGQ
Trigger: CTGGCCCTTCTCTCCAACCCAGTGGCCATGCTTTCT...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCCCTAAGGGCCAGTTATaGAGGTTGCCCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAPKGQL*RLPTSG
Trigger: ACCACTGGTGGGCAACCTCCATAACTGGCCCTTAGG...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTATGGCGATGCCTGGGTaGGGCAGAGAAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLMAMPG*GREVWP
Trigger: TGGCCACACTTCTCTGCCCCACCCAGGCATCGCCAT...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATATCTTACGGGTGACATaGAGCAAAGTGCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDILRVT*SKVLGW
Trigger: CCATCCCAGCACTTTGCTCCATGTCACCCGTAAGAT...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTGCACCAGGTCCTGCTTaGGTGAGGCCAGCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAAPGPA*VRPAAL
Trigger: TAGAGCTGCTGGCCTCACTCAAGCAGGACCTGGTGC...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCAGAGGAGCCATGCCGTaGCACTGCATATGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPRGAMP*HCICVR
Trigger: CCTAACACATATGCAGTGTCACGGCATGGCTCCTCT...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAAGAGCGAGCGGTCGGTaGGGATGTTTGGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGRASGR*GCLDSG
Trigger: CCCACTGTCCAAACATCCTCACCGACCGCTCGCTCT...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGGACCACAATGGACTTaGGGTTCCGGCAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCGPQWT*GSGRCC
Trigger: ACAGCATCTGCCGGAACCTCAAGTCCATTGTGGTCC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGGCTGCTGGGCTCTTTaGAATAATCCGCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRGCWAL*NNPQSQ
Trigger: TTGGGATTGCGGATTATTTCAAAGAGCCCAGCAGCC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGGCTGCTGGGCTCTTTaGAATAATCCGCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWGCWAL*NNPQSQ
Trigger: TTGGGATTGCGGATTATTTCAAAGAGCCCAGCAGCC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGGAGGACAGGAGACTTaGCAGTCCCCCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGGGQET*QSPSRS
Trigger: GCTTCTGGAGGGGGACTGTCAAGTCTCCTGTCCTCC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAAACTACTTCTCACTGTaGCAGGGCTGCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTNYFSL*QGCLGL
Trigger: CAGCCCCAGGCAGCCCTGTCACAGTGAGAAGTAGTT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCGACTGCAAAGGCCAGTaGAAAGTGAATCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPDCKGQ*KVNPVA
Trigger: AGCCACAGGATTCACTTTTCACTGGCCTTTGCAGTC...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGCTTGGTTCTGAGACCTaGTCCTTTGGGGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVLGSET*SFGDCK
Trigger: TTTGCAGTCCCCAAAGGATCAGGTCTCAGAACCAAG...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTCTTGGTTCTGAGACCTaGTCCTTTGGGGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSLGSET*SFGDCK
Trigger: TTTGCAGTCCCCAAAGGATCAGGTCTCAGAACCAAG...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACTTGGAGCCTTGGTTCTaGGACCTGATCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHLEPWF*DLILWG
Trigger: TCCCCAAAGGATCAGGTCTCAGAACCAAGGCTCCAA...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCGCTAGGGCTGGGAGCTaGTCCTATCTAGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAARAGS*SYLGEK
Trigger: TTTCTCTCCTAGATAGGATCAGCTCCCAGCCCTAGC...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCAGGGAGTTGCCAGCATaGCACCCTTGGTATTTTAGG +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPRELPA*HPWYFR
Trigger: CCTAAAATACCAAGGGTGTCATGCTGGCAACTCCCT...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCTTTTTCCTGACCCCTaGGGACAGGGCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSALFPDP*GQGWCR
Trigger: CCTGCACCAGCCCTGTCCTCAGGGGTCAGGAAAAAG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTGCAATGGAATACTCTaGCCTCTCATTCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSCNGIL*PLILAA
Trigger: TGCAGCAAGAATGAGAGGTCAGAGTATTCCATTGCA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTACTGGGTATGAGATGTaGAGGGATCCCGTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLTGYEM*RDPVWV
Trigger: CACCCAAACGGGATCCCTTCACATCTCATACCCAGT...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACGGCAAGGGCTGCAGATaGACACACTTGTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHGKGCR*THLSRN
Trigger: ATTCCTGGACAAGTGTGTTCATCTGCAGCCCTTGCC...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGGCAAGGGCTGCAGATaGACACACTTGTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLGKGCR*THLSRN
Trigger: ATTCCTGGACAAGTGTGTTCATCTGCAGCCCTTGCC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCGGCGCCGTCGCAGATaGTGTTGGTCTTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSARRRRR*CWSWRG
Trigger: TCCTCTCCAAGACCAACAGCATCTGCGACGGCGCCG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAGGAACTGGTCGATCTaGACCACCTCCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCRNWSI*TTSCCL
Trigger: CAAGCAGCAGGAGGTGGTGCAGATCGACCAGTTCCT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTGAGAGTGGGCCTGGGTaGACCACTGAGCCAGCATTG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAESGPG*TTEPAL
Trigger: CAATGCTGGCTCAGTGGTGCACCCAGGCCCACTCTC...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCCAGCGACCAATCATCTaGAGGCAGCGGTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAQRPII*RQRLLK
Trigger: CTTCAGTAACCGCTGCCTGCAGATGATTGGTCGCTG...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGGACCTGCAGCCGCATaGAGTTTCTCGCGAGTGATG +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTGPAAA*SFSRVM
Trigger: CATCACTCGCGAGAAACTGCATGCGGCTGCAGGTCC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTTGCCAAGTCTGAGCTaGCTTGTGGAGCCCCCATTG +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCLPSLS*LVEPPL
Trigger: CAATGGGGGCTCCACAAGGCAGCTCAGACTTGGCAA...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATATGGGTCTGGCTCCCTaGCAAGGCCACATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDMGLAP*QGHIFK
Trigger: CTTGAAGATGTGGCCTTGGCAGGGAGCCAGACCCAT...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGTAGGAGGCAAGGGGTaGCACACACAGCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTVGGKG*HTQPRL
Trigger: AAGCCTTGGCTGTGTGTGGCACCCCTTGCCTCCTAC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTGCAGGAGCTACAGGGTaGAGTTGGCAAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAAGATG*SWQGRT
Trigger: GGTCCTGCCTTGCCAACTGCACCCTGTAGCTCCTGC...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCACCCAGAGAGAAGTTaGCTAGAGCCTTGTATTCAG +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDHPERS*LEPCIQ
Trigger: CTGAATACAAGGCTCTAGGCAACTTCTCTCTGGGTG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCCTGTCAGCCCCAGGGTaGGTGTGCAATGGAATACTC +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCLSAPG*VCNGIL
Trigger: GAGTATTCCATTGCACACGCACCCTGGGGCTGACAG...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGTCACCTCAGGCCTCTaGCCTGGATACAAGACCCTT +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCVTSGL*PGYKTL
Trigger: AAGGGTCTTGTATCCAGGGCAGAGGCCTGAGGTGAC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGCCTGCTCCTTGCCCTaGAAGGAAGTGCTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTACSLP*KEVLSK
Trigger: CTTCGAGAGCACTTCCTTCCAGGGCAAGGAGCAGGC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGTCTCCTTCAGGAACTaGTCGATCTGCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCVSFRN*SICTTS
Trigger: GGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGAC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGTCGGTGAGGATGTTTaGACAGTGGGAGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCVGEDV*TVGDAQ
Trigger: CTGCGCATCTCCCACTGTCCAAACATCCTCACCGAC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTTCCGCAATCCCAATCTaGACCACAATGGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSSAIPI*TTMDLR
Trigger: CCTCAAGTCCATTGTGGTCCAGATTGGGATTGCGGA...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCCTCCGTCGCAGAGCCTaGAGTTTTGTCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCLRRRA*SFVTMS
Trigger: GGACATGGTGACAAAACTCCAGGCTCTGCGACGGAG...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATACCCCCAGGAAATGTaGATCCACAGCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTYPQEM*IHSLGR
Trigger: CCTGCCCAGGCTGTGGATCCACATTTCCTGGGGGTA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCCCTGGGGAGAAGTTCTaGGTGACTGTTTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPPGEKF*VTVSFP
Trigger: TGGAAAGGAAACAGTCACCCAGAACTTCTCCCCAGG...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAGGGTGGTCTCATCCTaGGGAGAAGTTCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCRVVSS*GEVLGD
Trigger: GTCACCCAGAACTTCTCCCCAGGATGAGACCACCCT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTAGCTCTGGTGTGCGGTaGGGTATGAGGTTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLSSGVR*GMRLGG
Trigger: TCCTCCCAACCTCATACCCCACCGCACACCAGAGCT...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTCTGAGAGGAGGAACTaGGGAGACCTCAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCSERRN*GDLSLW
Trigger: CCAAAGGCTGAGGTCTCCCCAGTTCCTCCTCTCAGA...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACTTTCCAAATGAAAGTTaGCAGGACCCCCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHFPNES*QDPRPL
Trigger: CAGAGGCCGGGGGTCCTGCCAACTTTCATTTGGAAA...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTGTCCCTGGGAAGGACTaGGTAACGAGGGGACCCCAT +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAVPGKD*VTRGPH
Trigger: ATGGGGTCCCCTCGTTACCCAGTCCTTCCCAGGGAC...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTCTTTACAAGGTAACCTaGGGGAGGGTCTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSLYKVT*GRVFMS
Trigger: GGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAG...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATATGGGATCCCAGCTCTaGAGGACTCTTTACAAGGTA +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDMGSQL*RTLYKV
Trigger: TACCTTGTAAAGAGTCCTCCAGAGCTGGGATCCCAT...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGGCTTTGTGCAGGACTaGGCAGGGAGTTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTGFVQD*AGSCQH
Trigger: ATGCTGGCAACTCCCTGCCCAGTCCTGCACAAAGCC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTGCAGGGAGAAGCCAATaGAGCCAGCTGCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAAGRSQ*SQLLWG
Trigger: ACCCCAGAGCAGCTGGCTCCATTGGCTTCTCCCTGC...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAACAGCCAGAACAGGGTaGAGGACTGAGGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTTARTG*RTEGLS
Trigger: GGAAAGCCCCTCAGTCCTCCACCCTGTTCTGGCTGT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGTGGTCTCTCCTGGCTaGGGAAAGGCTGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGVVSPG*GKAVVL
Trigger: CAGCACCACAGCCTTTCCCCAGCCAGGAGAGACCAC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCATAAGAGACCAGGAGTaGGGAAATAGGCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPIRDQE*GNRQDP
Trigger: TGGGTCCTGCCTATTTCCCCACTCCTGGTCTCTTAT...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTAAGTCCAACAGGAACTaGGACTTTGGCACCAATAGT +
Preference number: 4 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSKSNRN*DFGTNS
Trigger: ACTATTGGTGCCAAAGTCCCAGTTCCTGTTGGACTT...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCACTTCTCTGGGCATTTaGGCCTTACACCCACTCACC +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPTSLGI*ALHPLT
Trigger: GGTGAGTGGGTGTAAGGCCCAAATGCCCAGAGAAGT...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCAGGGACTGACAGGCTaGGACAGGTCCCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAQGLTG*DRSHGF
Trigger: GAACCCATGGGACCTGTCCCAGCCTGTCAGTCCCTG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATAGAAAGCATGGCCACTaGGTTGGAGAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDRKHGH*VGEKGQ
Trigger: CTGGCCCTTCTCTCCAACCCAGTGGCCATGCTTTCT...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTCTGGGTGAGAAAGCATaGCCACTGGGTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLLGEKA*PLGWRE
Trigger: TTCTCTCCAACCCAGTGGCCATGCTTTCTCACCCAG...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGGGCAGCCTTGGGACTaGCTGAGGTCCCAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGGQPWD*LRSQGF
Trigger: AAACCCTTGGGACCTCAGCCAGTCCCAAGGCTGCCC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCATCTTACGGGTGACATaGAGCAAAGTGCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPILRVT*SKVLGW
Trigger: CCATCCCAGCACTTTGCTCCATGTCACCCGTAAGAT...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CAA 72 bp CTCGAGTGTCACAGAACCAAGAAAACAGGAGCTGCCTaGATCCTTAGGTGGTCTCTCCTGGCTGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LECHRTKKTGAA*ILRWSLLAGER
Trigger: CCTTTCCCCAGCCAGGAGAGACCACCTAAGGATCAAGGCAGCTCCTGTTTTCTTGGTTCTGTGACACTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCTCCTGGGTGATCTCTaGCACGTGGTCAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSALLGDL*HVVKLQ
Trigger: CTGGAGCTTGACCACGTGTCAGAGATCACCCAGGAG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGACTGCCACCTCCTGGGTaGTCTCTGACACGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGLPPPG*SLTRGQ
Trigger: TTGACCACGTGTCAGAGATCACCCAGGAGGTGGCAG...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCGGCTGCTGGGCTCTTTaGAATAATCCGCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAGCWAL*NNPQSQ
Trigger: TTGGGATTGCGGATTATTTCAAAGAGCCCAGCAGCC...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTTGGAGCCTTGGTTCTaGGACCTGATCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCLEPWF*DLILWG
Trigger: TCCCCAAAGGATCAGGTCTCAGAACCAAGGCTCCAA...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTCTACTGTGGGAGTTCTaGGAGGAGGAACTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLLLWEF*EEELGR
Trigger: TCTCCCCAGTTCCTCCTCTCAGAACTCCCACAGTAG...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGAAAGAACTTTCCAAATaGAAGTTGGCAGGACCCCCG +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRKELSK*KLAGPP
Trigger: CGGGGGTCCTGCCAACTTTCATTTGGAAAGTTCTTT...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCAGGGAGTTGCCAGCATaGCACCCTTGGTATTTTAGG +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPRELPA*HPWYFR
Trigger: CCTAAAATACCAAGGGTGTCATGCTGGCAACTCCCT...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGGTGGGTAAAGATGGATaGAGTGCTTCTAGGGATAGC +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVVGKDG*SASRDS
Trigger: GCTATCCCTAGAAGCACTTCATCCATCTTTACCCAC...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTGTGGGTAAAGATGGATaGAGTGCTTCTAGGGATAGC +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSVGKDG*SASRDS
Trigger: GCTATCCCTAGAAGCACTTCATCCATCTTTACCCAC...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGGCAAGGGCTGCAGATaGACACACTTGTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCGKGCR*THLSRN
Trigger: ATTCCTGGACAAGTGTGTTCATCTGCAGCCCTTGCC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATCTGGCCCTGGTATTCTaGTCTTTACCCAATCCTAAA +
Preference number: 4 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDLALVF*SLPNPK
Trigger: TTTAGGATTGGGTAAAGATCAGAATACCAGGGCCAG...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACACCACTGAGCCAGCATTaGCAGGAACTTGGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTPLSQH*QELGAD
Trigger: GTCTGCTCCAAGTTCCTGGCAATGCTGGCTCAGTGG...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTTTGGACAGTGGGAGATaGGCAGGATCAGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLLDSGR*AGSAGS
Trigger: GGAACCTGCTGATCCTGCGCATCTCCCACTGTCCAA...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGGAAAGAAAGCTGTGCTaGTTTTTCCTGACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVERKLC*FFLTPE
Trigger: CTCAGGGGTCAGGAAAAAGCAGCACAGCTTTCTTTC...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCAGGGGCTGCAAAGCTaGCAGTGCTTGGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAQGLQS*QCLGMH
Trigger: ATGCATGCCCAAGCACTGGCAGCTTTGCAGCCCCTG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTTGGAGCAGGGCTGCTTaGTCTCAGATATTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSWSRAA*SQIFLS
Trigger: AGAAAGGAATATCTGAGAGCAAGCAGCCCTGCTCCA...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGAGGGATGCATATAAGTaGACCTTCATTTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVRDAYK*TFISCR
Trigger: CCGGCAGGAAATGAAGGTGCACTTATATGCATCCCT...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGCAATATATACAGAAATaGAGGCCGGGCACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWQYIQK*RPGTRL
Trigger: CAGCCTTGTGCCCGGCCTGCATTTCTGTATATATTG...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGAGATGCTGTTGGTCTTaGAGAGGATGTAGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRRCCWS*RGCRAS
Trigger: AGACGCTCTACATCCTCTCCAAGACCAACAGCATCT...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTAGATGCTGTTGGTCTTaGAGAGGATGTAGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSRCCWS*RGCRAS
Trigger: AGACGCTCTACATCCTCTCCAAGACCAACAGCATCT...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTCGTCGCAGATGCTGTTaGTCTTGGAGAGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLRRRCC*SWRGCR
Trigger: TCTACATCCTCTCCAAGACCAACAGCATCTGCGACG...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTGCCTGCTCCTTGCCCTaGAAGGAAGTGCTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAACSLP*KEVLSK
Trigger: CTTCGAGAGCACTTCCTTCCAGGGCAAGGAGCAGGC...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGCATTGCCAGGAACTTaGAGCAGACACGGGCATTCT +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCALPGT*SRHGHS
Trigger: AGAATGCCCGTGTCTGCTCCAAGTTCCTGGCAATGC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGTGATCTCTGACACGTaGTCAAGCTCCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTVISDT*SSSRTC
Trigger: GCAGGTCCTGGAGCTTGACCACGTGTCAGAGATCAC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTTACCCCCAGGAAATGTaGATCCACAGCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAYPQEM*IHSLGR
Trigger: CCTGCCCAGGCTGTGGATCCACATTTCCTGGGGGTA...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGGCAATCCCCCACCTTaGAAGGGTGGTCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGGNPPP*KGGLIL
Trigger: CAGGATGAGACCACCCTTCCAAGGTGGGGGATTGCC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAATGGGATCCCAGCTCTaGAGGACTCTTTACAAGGTA +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPMGSQL*RTLYKV
Trigger: TACCTTGTAAAGAGTCCTCCAGAGCTGGGATCCCAT...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGCTACAGGGTGCAGTTaGCAAGGCAGGACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCATGCS*QGRTKK
Trigger: TTTCTTGGTCCTGCCTTGCCAACTGCACCCTGTAGC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGAGAAAATCCTTCAGTTaGGCAGGCTCAAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWRKSFS*AGSSQA
Trigger: TGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCT...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATGGGATGGAAGGTCCCTaGGGCAGAGAAAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDGMEGP*GRENPS
Trigger: TGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCCC...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTACAGCCAGAACAGGGTaGAGGACTGAGGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSATARTG*RTEGLS
Trigger: GGAAAGCCCCTCAGTCCTCCACCCTGTTCTGGCTGT...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGATGGGGCCAGACTGGATaGCAGGGGGTGGTAGAAACA +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGWGQTG*QGVVET
Trigger: TGTTTCTACCACCCCCTGCCATCCAGTCTGGCCCCA...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTAGTCGTTGCCTTAGCTaGCCCTGGTATTCTGATCTT +
Preference number: 4 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSSRCLS*PWYSDL
Trigger: AAGATCAGAATACCAGGGCCAGCTAAGGCAACGACT...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGAGGTCCCAAGGGTTTaGGGAGGGAGTCGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGEVPRV*GGSRCL
Trigger: AAGGCAACGACTCCCTCCCCAAACCCTTGGGACCTC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTCTCAGGCCTCTGCCCTaGATACAAGACCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLLRPLP*IQDPCQ
Trigger: CTGACAAGGGTCTTGTATCCAGGGCAGAGGCCTGAG...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCATGCAATGGAATACTCTaGCCTCTCATTCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPCNGIL*PLILAA
Trigger: TGCAGCAAGAATGAGAGGTCAGAGTATTCCATTGCA...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGTGGGTAAAGATGGATaGAGTGCTTCTAGGGATAGC +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPVGKDG*SASRDS
Trigger: GCTATCCCTAGAAGCACTTCATCCATCTTTACCCAC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTAGGGCATCTTACGGGTaGCATGGAGCAAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSARASYG*HGAKCW
Trigger: CCAGCACTTTGCTCCATGTCACCCGTAAGATGCCCT...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCCCTTCCACCTTGATGTaGAGAATCTTAGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAPSTLM*RILEKP
Trigger: CGGCTTCTCTAAGATTCTGCACATCAAGGTGGAAGG...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGAAAGAAAGCTGTGCTaGTTTTTCCTGACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPERKLC*FFLTPE
Trigger: CTCAGGGGTCAGGAAAAAGCAGCACAGCTTTCTTTC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATGCAAAGGATTGGGCCTaGTCACACACATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDAKDWA*SHTSFT
Trigger: TGTGAAGGATGTGTGTGAGCAGGCCCAATCCTTTGC...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACAGGGATGCATATAAGTaGACCTTCATTTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHRDAYK*TFISCR
Trigger: CCGGCAGGAAATGAAGGTGCACTTATATGCATCCCT...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGTCGGTGAGGATGTTTaGACAGTGGGAGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGVGEDV*TVGDAQ
Trigger: CTGCGCATCTCCCACTGTCCAAACATCCTCACCGAC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGACTCCGTCGCAGAGCCTaGAGTTTTGTCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGLRRRA*SFVTMS
Trigger: GGACATGGTGACAAAACTCCAGGCTCTGCGACGGAG...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACACAGCTGAGGAGCCACTaGGTGGTTATTGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTQLRSH*VVIADP
Trigger: AGGATCTGCAATAACCACCCAGTGGCTCCTCAGCTG...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCCCTGGGGAGAAGTTCTaGGTGACTGTTTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCPGEKF*VTVSFP
Trigger: TGGAAAGGAAACAGTCACCCAGAACTTCTCCCCAGG...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGGAGACCTCAGCCTTTaGAGCCTTGGTTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGGDLSL*SLGSET
Trigger: GGTCTCAGAACCAAGGCTCCAAAGGCTGAGGTCTCC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACATGGGATCCCAGCTCTaGAGGACTCTTTACAAGGTA +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHMGSQL*RTLYKV
Trigger: TACCTTGTAAAGAGTCCTCCAGAGCTGGGATCCCAT...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATCCCTTCCAGGCCTCTaGAGGAGAGGAAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTSLPGL*RRGKKA
Trigger: AGCTTTCTTTCCTCTCCTCCAGAGGCCTGGAAGGGA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGCTACAGGGTGCAGTTaGCAAGGCAGGACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLATGCS*QGRTKK
Trigger: TTTCTTGGTCCTGCCTTGCCAACTGCACCCTGTAGC...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCCTTGTATTCAGGGATaGAAGGTCCCTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAPCIQG*KVPGAE
Trigger: CTCTGCCCCAGGGACCTTCCATCCCTGAATACAAGG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCAGGGTGCGTGTGCAATaGAATACTCTGACCTCTCAT +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPRVRVQ*NTLTSH
Trigger: ATGAGAGGTCAGAGTATTCCATTGCACACGCACCCT...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATGGGATCCCGTTTGGGTaGGTAAAGATGGATGAAGTG +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDGIPFG*VKMDEV
Trigger: CACTTCATCCATCTTTACCCACCCAAACGGGATCCC...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCAATTCCTGAGGGGCTaGCTCAGACTCGAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAQFLRG*LRLECH
Trigger: GTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAAGTCCAACAGGAACTaGGACTTTGGCACCAATAGT +
Preference number: 4 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPKSNRN*DFGTNS
Trigger: ACTATTGGTGCCAAAGTCCCAGTTCCTGTTGGACTT...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGAAGTCCAACAGGAACTaGGACTTTGGCACCAATAGT +
Preference number: 4 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRKSNRN*DFGTNS
Trigger: ACTATTGGTGCCAAAGTCCCAGTTCCTGTTGGACTT...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTAGAAAGCATGGCCACTaGGTTGGAGAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSARKHGH*VGEKGQ
Trigger: CTGGCCCTTCTCTCCAACCCAGTGGCCATGCTTTCT...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACTGCCTTAGCTGGCCCTaGTATTCTGATCTTTACCCA +
Preference number: 4 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHCLSWP*YSDLYP
Trigger: TGGGTAAAGATCAGAATACCAGGGCCAGCTAAGGCA...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGACCTAAGGGCCAGTTATaGAGGTTGCCCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGPKGQL*RLPTSG
Trigger: ACCACTGGTGGGCAACCTCCATAACTGGCCCTTAGG...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCTGTGGGGAAGCAGCCTaGATAAAGCATGAAGTACTT +
Preference number: 4 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQACGEAA*IKHEVL
Trigger: AAGTACTTCATGCTTTATTCAGGCTGCTTCCCCACA...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCCTGGCCCTGGTATTCTaGTCTTTACCCAATCCTAAA +
Preference number: 4 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPLALVF*SLPNPK
Trigger: TTTAGGATTGGGTAAAGATCAGAATACCAGGGCCAG...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCCACCCAGAGAGAAGTTaGCTAGAGCCTTGTATTCAG +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCHPERS*LEPCIQ
Trigger: CTGAATACAAGGCTCTAGGCAACTTCTCTCTGGGTG...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGCAAAGGATTGGGCCTaGTCACACACATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLAKDWA*SHTSFT
Trigger: TGTGAAGGATGTGTGTGAGCAGGCCCAATCCTTTGC...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATAGATGCTGTTGGTCTTaGAGAGGATGTAGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDRCCWS*RGCRAS
Trigger: AGACGCTCTACATCCTCTCCAAGACCAACAGCATCT...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAAGGATGTTTGGACAGTaGGAGATGCGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGRMFGQ*EMRRIS
Trigger: GCTGATCCTGCGCATCTCCCACTGTCCAAACATCCT...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTTCCTGCCCAAGCACCTaGATTAGAAGGAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLSCPST*IRRKFL
Trigger: AAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGA...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTCTTTACAAGGTAACCTaGGGGAGGGTCTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLLYKVT*GRVFMS
Trigger: GGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAG...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAGAAAATCCTTCAGTTaGGCAGGCTCAAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCRKSFS*AGSSQA
Trigger: TGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAGGGTGCGTGTGCAATaGAATACTCTGACCTCTCAT +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCRVRVQ*NTLTSH
Trigger: ATGAGAGGTCAGAGTATTCCATTGCACACGCACCCT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGATGGAGCCAAACCTTaGAGTAGCAGGCCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGDGAKP*SSRPWE
Trigger: TTCCCAAGGCCTGCTACTCCAAGGTTTGGCTCCATC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTGATGGAGCCAAACCTTaGAGTAGCAGGCCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSADGAKP*SSRPWE
Trigger: TTCCCAAGGCCTGCTACTCCAAGGTTTGGCTCCATC...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTATAAGAGACCAGGAGTaGGGAAATAGGCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLIRDQE*GNRQDP
Trigger: TGGGTCCTGCCTATTTCCCCACTCCTGGTCTCTTAT...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAATAAGAGACCAGGAGTaGGGAAATAGGCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTIRDQE*GNRQDP
Trigger: TGGGTCCTGCCTATTTCCCCACTCCTGGTCTCTTAT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCTGGGTGAGAAAGCATaGCCACTGGGTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSALGEKA*PLGWRE
Trigger: TTCTCTCCAACCCAGTGGCCATGCTTTCTCACCCAG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAGTCGTTGCCTTAGCTaGCCCTGGTATTCTGATCTT +
Preference number: 4 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCSRCLS*PWYSDL
Trigger: AAGATCAGAATACCAGGGCCAGCTAAGGCAACGACT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CAA 72 bp CCTGTTTTTACCCCAAGTCCAACAGGAACTGGGACTTaGGCACCAATAGTCACTCTGGGAAGGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PVFTPSPTGTGT*APIVTLGRPPS
Trigger: TGAAGGAGGCCTTCCCAGAGTGACTATTGGTGCCAAAGTCCCAGTTCCTGTTGGACTTGGGGTAAAAACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAAAAGAACTTTCCAAATaGAAGTTGGCAGGACCCCCG +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTKELSK*KLAGPP
Trigger: CGGGGGTCCTGCCAACTTTCATTTGGAAAGTTCTTT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTAGGGAGTTGCCAGCATaGCACCCTTGGTATTTTAGG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSARELPA*HPWYFR
Trigger: CCTAAAATACCAAGGGTGTCATGCTGGCAACTCCCT...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGCATCTTACTGGGTATaGGATGTGAAGGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGASYWV*DVKGSR
Trigger: ACGGGATCCCTTCACATCTCATACCCAGTAAGATGC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTCCTTCCACCTTGATGTaGAGAATCTTAGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLPSTLM*RILEKP
Trigger: CGGCTTCTCTAAGATTCTGCACATCAAGGTGGAAGG...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTAGGGATGCATATAAGTaGACCTTCATTTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLRDAYK*TFISCR
Trigger: CCGGCAGGAAATGAAGGTGCACTTATATGCATCCCT...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCTTTACAAGGTAACCTaGGGGAGGGTCTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSALYKVT*GRVFMS
Trigger: GGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTGGGATCCCGTTTGGGTaGGTAAAGATGGATGAAGTG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAGIPFG*VKMDEV
Trigger: CACTTCATCCATCTTTACCCACCCAAACGGGATCCC...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGACTGGGACAGGTCCCATaGGTTCGAGTTAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGLGQVP*VRVNFS
Trigger: AGAGAAGTTAACTCGAACCCATGGGACCTGTCCCAG...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATGCCTTAGCTGGCCCTaGTATTCTGATCTTTACCCA +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTCLSWP*YSDLYP
Trigger: TGGGTAAAGATCAGAATACCAGGGCCAGCTAAGGCA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTAGTCGTTGCCTTAGCTaGCCCTGGTATTCTGATCTT +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLSRCLS*PWYSDL
Trigger: AAGATCAGAATACCAGGGCCAGCTAAGGCAACGACT...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
3UTR CAA 72 bp CAGGTCCCATGGGTTCGAGTTAACTTCTCTGGGCATTaGGGCCTTACACCCACTCACCATCTCCTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: QVPWVRVNFSGH*GLTPTHHLLFL
Trigger: TAAAAACAGGAGATGGTGAGTGGGTGTAAGGCCCAAATGCCCAGAGAAGTTAACTCGAACCCATGGGACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTTGTGGGGAAGCAGCCTaGATAAAGCATGAAGTACTT +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLCGEAA*IKHEVL
Trigger: AAGTACTTCATGCTTTATTCAGGCTGCTTCCCCACA...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGCAGATATTCCTTTCTTaGATCTTACTGGGTATGAGA +
Preference number: 4 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVQIFLS*ILLGMR
Trigger: TCTCATACCCAGTAAGATGCAAGAAAGGAATATCTG...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCAATATATACAGAAATaGAGGCCGGGCACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAQYIQK*RPGTRL
Trigger: CAGCCTTGTGCCCGGCCTGCATTTCTGTATATATTG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATCCTGCCCAAGCACCTaGATTAGAAGGAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTSCPST*IRRKFL
Trigger: AAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CCA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTTCCTGCCCAAGCACCTaGATTAGAAGGAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLSCPST*IRRKFL
Trigger: AAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGA...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGATGCAATGGAATACTCTaGCCTCTCATTCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGCNGIL*PLILAA
Trigger: TGCAGCAAGAATGAGAGGTCAGAGTATTCCATTGCA...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR TCA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGACTGGCCCTGGTATTCTaGTCTTTACCCAATCCTAAA +
Preference number: 4 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGLALVF*SLPNPK
Trigger: TTTAGGATTGGGTAAAGATCAGAATACCAGGGCCAG...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR GCA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCAGATATTCCTTTCTTaGATCTTACTGGGTATGAGA +
Preference number: 4 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAQIFLS*ILLGMR
Trigger: TCTCATACCCAGTAAGATGCAAGAAAGGAATATCTG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS TCA 90 bp CTAGCGGGCACCAGGTCGCCGGGGAAGTGGGCGAGGGGAGCGTGGTaGTGGTGGTGGTGCAGCAGGTGCGGCGCCGCGGGCGACGGCCCG +
Preference number: 5 (lower is better)
Translates to: LAGTRSPGKWARGAW*WWWCSRCGAAGDGP
Trigger: CGGGCCGTCGCCCGCGGCGCCGCACCTGCTGCACCACCACCATCACCACGCTCCCCTCGCCCACTTCCCCGGCGACCTGGTGCCCGCTAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp CCGCGGGCGACGGCCCGGCCGCCTGCTCCTTGCCCTGGAAGGAAGTaGTCTCGAAGACCTCTCGCCGGGCGCCGGGCACGGCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: PRATARPPAPCPGRK*SRRPLAGRRARPAG
Trigger: CCCTGCTGGCCGTGCCCGGCGCCCGGCGAGAGGTCTTCGAGAGCACTTCCTTCCAGGGCAAGGAGCAGGCGGCCGGGCCGTCGCCCGCGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 90 bp AGGTGCGGCGCCGCGGGCGACGGCCCGGCCGCCTGCTCCTTGCCCTaGAAGGAAGTGCTCTCGAAGACCTCTCGCCGGGCGCCGGGCACG +
Preference number: 5 (lower is better)
Translates to: RCGAAGDGPAACSLP*KEVLSKTSRRAPGT
Trigger: CGTGCCCGGCGCCCGGCGAGAGGTCTTCGAGAGCACTTCCTTCCAGGGCAAGGAGCAGGCGGCCGGGCCGTCGCCCGCGGCGCCGCACCT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 90 bp CAGTTCTGGATGGCCTGGCGCCGCAGGCCTGAGCTGCGAGGGGGCTaGGACCGCTCTGAGCCCCCGTTGGCAGCCTGGGCCCGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: QFWMAWRRRPELRGG*DRSEPPLAAWARVP
Trigger: GGGCACACGGGCCCAGGCTGCCAACGGGGGCTCAGAGCGGTCCCAGCCCCCTCGCAGCTCAGGCCTGCGGCGCCAGGCCATCCAGAACTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 90 bp ACGCAGAAGAGCCCCCGCGTGCCCGGTCCAGACGCAGGGCCGCCTTaGGGCCTCGGATCTCGTTCCCCTCCGCAGCCTTGGGTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: TQKSPRVPGPDAGPP*GLGSRSPPQPWVAA
Trigger: GGCGGCCACCCAAGGCTGCGGAGGGGAACGAGATCCGAGGCCCCAAGGCGGCCCTGCGTCTGGACCGGGCACGCGGGGGCTCTTCTGCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000520186.1
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp GTCTGCGCTGCCAGTTCTGGATGGCCTGGCGCCGCAGGCCTGAGCTaGGAGGGGGCTGGGACCGCTCTGAGCCCCCGTTGGCAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: VCAASSGWPGAAGLS*EGAGTALSPRWQPG
Trigger: CCCAGGCTGCCAACGGGGGCTCAGAGCGGTCCCAGCCCCCTCGCAGCTCAGGCCTGCGGCGCCAGGCCATCCAGAACTGGCAGCGCAGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS TCA 90 bp GCAGCTGCCGCTCGGCACGGTCAGCCCGCTCAAGGAGCTCCTCAATaGACTGCTGCAGCCGCAGCTTGGCGCTGGCCTCCCGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: AAAARHGQPAQGAPQ*TAAAAAWRWPPAPP
Trigger: CGGCGGCGCGGGAGGCCAGCGCCAAGCTGCGGCTGCAGCAGTTCATTGAGGAGCTCCTTGAGCGGGCTGACCGTGCCGAGCGGCAGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295133.9
ENST00000519873.1
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp AGGCAGCGGCGGCGGCGGCCGCGGCGGCGGCGGCGCCGTCGCAGATaGTGTTGGTCTTGGAGAGGATGTAGAGCGTCTCGTAGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: RQRRRRPRRRRRRRR*CWSWRGCRASRRCG
Trigger: GCCACACCTACGAGACGCTCTACATCCTCTCCAAGACCAACAGCATCTGCGACGGCGCCGCCGCCGCCGCGGCCGCCGCCGCCGCTGCCT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp CTCCCCCAGCGGGATCTCGATCTCGCGCAGCGCATAGCGCGCTGCTaGGGCGGGCACAAGGCCCGGCTCGGCCAACTCCTCACAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LPQRDLDLAQRIARC*GGHKARLGQLLTGQ
Trigger: CTGCCCTGTGAGGAGTTGGCCGAGCCGGGCCTTGTGCCCGCCGCAGCAGCGCGCTATGCGCTGCGCGAGATCGAGATCCCGCTGGGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp CAGCTCCCCCAGCGGGATCTCGATCTCGCGCAGCGCATAGCGCGCTaGTGCGGCGGGCACAAGGCCCGGCTCGGCCAACTCCTCACAGGG +
Preference number: 5 (lower is better)
Translates to: QLPQRDLDLAQRIAR*CGGHKARLGQLLTG
Trigger: CCCTGTGAGGAGTTGGCCGAGCCGGGCCTTGTGCCCGCCGCAGCAGCGCGCTATGCGCTGCGCGAGATCGAGATCCCGCTGGGGGAGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp TGCCGCGCAGTCTCCAGTTCGGCCGCCTTGCGCTCCAGCTCGGCCTaGAGCCGGCCCACCTGGCCCGCGATCTTCTGCTCCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: CRAVSSSAALRSSSA*SRPTWPAIFCSTSS
Trigger: CGAGGAGGTGGAGCAGAAGATCGCGGGCCAGGTGGGCCGGCTGCAGGCCGAGCTGGAGCGCAAGGCGGCCGAACTGGAGACTGCGCGGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp CGCTCCTCCAGCTCCTCCTTCTCGCGCCCGAGCCTCGCACTCTCCTaGCGCGCAGTCTCCAGTTCGGCCGCCTTGCGCTCCAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: RSSSSSFSRPSLALS*RAVSSSAALRSSSA
Trigger: GGCCGAGCTGGAGCGCAAGGCGGCCGAACTGGAGACTGCGCGGCAGGAGAGTGCGAGGCTCGGGCGCGAGAAGGAGGAGCTGGAGGAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp TGCCGCTCGGCACGGTCAGCCCGCTCAAGGAGCTCCTCAATGAACTaGTGCAGCCGCAGCTTGGCGCTGGCCTCCCGCGCCGCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: CRSARSARSRSSSMN*CSRSLALASRAAVS
Trigger: GGAGACGGCGGCGCGGGAGGCCAGCGCCAAGCTGCGGCTGCAGCAGTTCATTGAGGAGCTCCTTGAGCGGGCTGACCGTGCCGAGCGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295133.9
ENST00000519873.1
ENST00000520530.3
ENST00000521871.5
CDS CCA 90 bp TCAGTGCTGTGTCGGCGGGGTCTGCGCTGCCAGTTCTGGATGGCCTaGCGCCGCAGGCCTGAGCTGCGAGGGGGCTGGGACCGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SVLCRRGLRCQFWMA*RRRPELRGGWDRSE
Trigger: CTCAGAGCGGTCCCAGCCCCCTCGCAGCTCAGGCCTGCGGCGCCAGGCCATCCAGAACTGGCAGCGCAGACCCCGCCGACACAGCACTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACAGGCTCCGGAAGCGCTaGTGCTCCCCGCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDRLRKR*CSPQRG
Trigger: CCCCCGCTGCGGGGAGCACAAGCGCTTCCGGAGCCT...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp CGCTCGGCACGGTCAGCCCGCTCAAGGAGCTCCTCAATGAACTGCTaGAGCCGCAGCTTGGCGCTGGCCTCCCGCGCCGCCGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RSARSARSRSSSMNC*SRSLALASRAAVSF
Trigger: GAAGGAGACGGCGGCGCGGGAGGCCAGCGCCAAGCTGCGGCTGCAGCAGTTCATTGAGGAGCTCCTTGAGCGGGCTGACCGTGCCGAGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295133.9
ENST00000519873.1
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp CCCAGGCTGGCGCTGGGCGTGCTGCCACAGCTGCTGCTGATGACCTaGAGCTGCCGCTCGGCACGGTCAGCCCGCTCAAGGAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PRLALGVLPQLLLMT*SCRSARSARSRSSS
Trigger: TGAGGAGCTCCTTGAGCGGGCTGACCGTGCCGAGCGGCAGCTGCAGGTCATCAGCAGCAGCTGTGGCAGCACGCCCAGCGCCAGCCTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295133.9
ENST00000519873.1
ENST00000520530.3
ENST00000521871.5
CDS CCA 90 bp CGGCGGCGGCGGCCGCGGCGGCGGCGGCGCCGTCGCAGATGCTGTTaGTCTTGGAGAGGATGTAGAGCGTCTCGTAGGTGTGGCTGTACT +
Preference number: 5 (lower is better)
Translates to: RRRRPRRRRRRRRCC*SWRGCRASRRCGCT
Trigger: AGTACAGCCACACCTACGAGACGCTCTACATCCTCTCCAAGACCAACAGCATCTGCGACGGCGCCGCCGCCGCCGCGGCCGCCGCCGCCG
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp ACATCACCCTCTTCCCCCTCAGTGCTGTGTCGGCGGGGTCTGCGCTaGCAGTTCTGGATGGCCTGGCGCCGCAGGCCTGAGCTGCGAGGG +
Preference number: 5 (lower is better)
Translates to: TSPSSPSVLCRRGLR*QFWMAWRRRPELRG
Trigger: CCCTCGCAGCTCAGGCCTGCGGCGCCAGGCCATCCAGAACTGGCAGCGCAGACCCCGCCGACACAGCACTGAGGGGGAAGAGGGTGATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp CGGAGACATCACCCTCTTCCCCCTCAGTGCTGTGTCGGCGGGGTCTaGGCTGCCAGTTCTGGATGGCCTGGCGCCGCAGGCCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RRHHPLPPQCCVGGV*AASSGWPGAAGLSC
Trigger: GCAGCTCAGGCCTGCGGCGCCAGGCCATCCAGAACTGGCAGCGCAGACCCCGCCGACACAGCACTGAGGGGGAAGAGGGTGATGTCTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp CTTGGAGCAGACACGGGCATTCTCAAGCAGCACCCTTGTCCAGACTaGGGGGTGGCGGGCCACGAAGCGCCAGTCCCGGCAGACCTCGGC +
Preference number: 5 (lower is better)
Translates to: LGADTGILKQHPCPD*GVAGHEAPVPADLG
Trigger: GCCGAGGTCTGCCGGGACTGGCGCTTCGTGGCCCGCCACCCCGCAGTCTGGACAAGGGTGCTGCTTGAGAATGCCCGTGTCTGCTCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp GCGCTGGCCTCCCGCGCCGCCGTCTCCTTCAGGAACTGGTCGATCTaGACCACCTCCCTGGGCCCAGAGCAGTCTCTTACCCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: ALASRAAVSFRNWSI*TTSLGPEQSLTPEP
Trigger: AGGCTCTGGGGTAAGAGACTGCTCTGGGCCCAGGGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGACGGCGGCGCGGGAGGCCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519873.1
CDS CCA 90 bp CGGCGGCCGCGGCGGCGGCGGCGCCGTCGCAGATGCTGTTGGTCTTaGAGAGGATGTAGAGCGTCTCGTAGGTGTGGCTGTACTCCAGGT +
Preference number: 5 (lower is better)
Translates to: RRPRRRRRRRRCCWS*RGCRASRRCGCTPG
Trigger: ACCTGGAGTACAGCCACACCTACGAGACGCTCTACATCCTCTCCAAGACCAACAGCATCTGCGACGGCGCCGCCGCCGCCGCGGCCGCCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 90 bp CAGACACGGGCATTCTCAAGCAGCACCCTTGTCCAGACTGCGGGGTaGCGGGCCACGAAGCGCCAGTCCCGGCAGACCTCGGCAGCATGC +
Preference number: 5 (lower is better)
Translates to: QTRAFSSSTLVQTAG*RATKRQSRQTSAAC
Trigger: GCATGCTGCCGAGGTCTGCCGGGACTGGCGCTTCGTGGCCCGCCACCCCGCAGTCTGGACAAGGGTGCTGCTTGAGAATGCCCGTGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 90 bp CGCAGCTTGGCGCTGGCCTCCCGCGCCGCCGTCTCCTTCAGGAACTaGTCGATCTGCACCACCTCCCTGGGCCCAGAGCAGTCTCTTACC +
Preference number: 5 (lower is better)
Translates to: RSLALASRAAVSFRN*SICTTSLGPEQSLT
Trigger: GGTAAGAGACTGCTCTGGGCCCAGGGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGACGGCGGCGCGGGAGGCCAGCGCCAAGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519873.1
CDS-3UTR CAA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTGCTGCAGCCGCAGCTaGGCGCTGGCCTCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSCCSRS*ALASRA
Trigger: GGCGCGGGAGGCCAGCGCCAAGCTGCGGCTGCAGCA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAAGTGGCAGAGGAGGCTaGGCCTCACGGTGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAASGRGG*ASRWGA
Trigger: GGCTCCCCACCGTGAGGCCAAGCCTCCTCTGCCACT...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAAGACGCAGGGCCGCCTaGGGGCCTCGGATCTCGTTC +
Preference number: 5 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAARRRAA*GPRISF
Trigger: GAACGAGATCCGAGGCCCCAAGGCGGCCCTGCGTCT...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520530.3
ENST00000521871.5
CDS TCA 90 bp CATAGCAGGCCCGGGGCGGGGCGCATCCAACGGGCCCTCAGCCTCTaGCTCAGTGGTTCGGGAGCCAACGTCGGAGACATCACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: HSRPGAGRIQRALSL*LSGSGANVGDITLF
Trigger: GAAGAGGGTGATGTCTCCGACGTTGGCTCCCGAACCACTGAGTCAGAGGCTGAGGGCCCGTTGGATGCGCCCCGCCCCGGGCCTGCTATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 90 bp GCGCCGCCGTCTCCTTCAGGAACTGGTCGATCTGCACCACCTCCCTaGGCCCAGAGCAGTCTCTTACCCCAGAGCCTCAGCCTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: APPSPSGTGRSAPPP*AQSSLLPQSLSLPA
Trigger: GGCAGGCAGGCTGAGGCTCTGGGGTAAGAGACTGCTCTGGGCCCAGGGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGACGGCGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519873.1
CDS TCA 90 bp CTCCTCTGGCCTGGGCAGCTCCAGACTGTCACTGTCATAGCAGCCTaGGCTCTGGGATGCGGCTGGCACACGGCTGGAGGCCCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: LLWPGQLQTVTVIAA*ALGCGWHTAGGPCA
Trigger: AGCACAGGGGCCTCCAGCCGTGTGCCAGCCGCATCCCAGAGCTCAGGCTGCTATGACAGTGACAGTCTGGAGCTGCCCAGGCCAGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295133.9
ENST00000519873.1
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp TGGTTCGGGAGCCAACGTCGGAGACATCACCCTCTTCCCCCTCAGTaGTGTGTCGGCGGGGTCTGCGCTGCCAGTTCTGGATGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: WFGSQRRRHHPLPPQ*CVGGVCAASSGWPG
Trigger: GCCAGGCCATCCAGAACTGGCAGCGCAGACCCCGCCGACACAGCACTGAGGGGGAAGAGGGTGATGTCTCCGACGTTGGCTCCCGAACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp GGGGTGAAGTGGTGCCACTTGGAGGGAGACGATCTCTCTGCAGCCTaGGCCCAGGGCCCAAATGACCTCATGGCCCACGGGGTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: GVKWCHLEGDDLSAA*AQGPNDLMAHGVCG
Trigger: GCCACAGACCCCGTGGGCCATGAGGTCATTTGGGCCCTGGGCGCAGGCTGCAGAGAGATCGTCTCCCTCCAAGTGGCACCACTTCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTGAGGACGCCACGGACTaGCGGGCGAACAGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSEDATD*RANSSP
Trigger: GGGGGAGCTGTTCGCCCGCAAGTCCGTGGCGTCCTC...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTTCCAGCGCGCGGATCTaGAGGCGCGCCAGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSSSARI*RRARPS
Trigger: AGAGGGCCTGGCGCGCCTCAAGATCCGCGCGCTGGA...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCATGCTGCAGCCGCAGCTaGGCGCTGGCCTCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPCCSRS*ALASRA
Trigger: GGCGCGGGAGGCCAGCGCCAAGCTGCGGCTGCAGCA...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS TCA 90 bp AGCTCGCATCTTCAGGATCTCTGGGCTGATGACCTCATTGGAGCGTaGGGGGCTGACCCTCTCTGCTCGCCGACCCCGCCCACTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SSHLQDLWADDLIGA*GADPLCSPTPPTAS
Trigger: GGAGGCAGTGGGCGGGGTCGGCGAGCAGAGAGGGTCAGCCCCTCACGCTCCAATGAGGTCATCAGCCCAGAGATCCTGAAGATGCGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS TCA 90 bp GCAGGGCACGGCAGTAGCAGCTGGCCAGCCAGAGCGAGCGGTCGGTaGGGATGTTTGGACAGTGGGAGATGCGCAGGATCAGCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: AGHGSSSWPARASGR*GCLDSGRCAGSAGS
Trigger: GGAACCTGCTGATCCTGCGCATCTCCCACTGTCCAAACATCCTCACCGACCGCTCGCTCTGGCTGGCCAGCTGCTACTGCCGTGCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 90 bp GAGACGATCTCTCTGCAGCCTGCGCCCAGGGCCCAAATGACCTCATaGCCCACGGGGTCTGTGGCACTCCTGTACGTGACAGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ETISLQPAPRAQMTS*PTGSVALLYVTACR
Trigger: CCTGCAGGCTGTCACGTACAGGAGTGCCACAGACCCCGTGGGCCATGAGGTCATTTGGGCCCTGGGCGCAGGCTGCAGAGAGATCGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGAGGCTCCGGAAGCGCTaGTGCTCCCCGCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWRLRKR*CSPQRG
Trigger: CCCCCGCTGCGGGGAGCACAAGCGCTTCCGGAGCCT...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS TCA 90 bp GCTGCTTGCGGCTCAGCTCCTGTTCCTTGTGCACCAGGTCCTGCTTaGGTGAGGCCAGCAGCTCTACGCTCACGTCCACCTGGCGGGAGA +
Preference number: 5 (lower is better)
Translates to: AACGSAPVPCAPGPA*VRPAALRSRPPGGR
Trigger: TCTCCCGCCAGGTGGACGTGAGCGTAGAGCTGCTGGCCTCACTCAAGCAGGACCTGGTGCACAAGGAACAGGAGCTGAGCCGCAAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp TCCTGCTGCTTGCGGCTCAGCTCCTGTTCCTTGTGCACCAGGTCCTaGTTGAGTGAGGCCAGCAGCTCTACGCTCACGTCCACCTGGCGG +
Preference number: 5 (lower is better)
Translates to: SCCLRLSSCSLCTRS*LSEASSSTLTSTWR
Trigger: CCGCCAGGTGGACGTGAGCGTAGAGCTGCTGGCCTCACTCAAGCAGGACCTGGTGCACAAGGAACAGGAGCTGAGCCGCAAGCAGCAGGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp GCCACCTCCTGGGTGATCTCTGACACGTGGTCAAGCTCCAGGACCTaGAGCCGCATGCAGTTTCTCGCGAGTGATGCCAGGCCCTGCACC +
Preference number: 5 (lower is better)
Translates to: ATSWVISDTWSSSRT*SRMQFLASDARPCT
Trigger: GGTGCAGGGCCTGGCATCACTCGCGAGAAACTGCATGCGGCTGCAGGTCCTGGAGCTTGACCACGTGTCAGAGATCACCCAGGAGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACAGGCTCCGGAAGCGCTaGTGCTCCCCGCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHRLRKR*CSPQRG
Trigger: CCCCCGCTGCGGGGAGCACAAGCGCTTCCGGAGCCT...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGAGGACGCCACGGACTaGCGGGCGAACAGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWEDATD*RANSSP
Trigger: GGGGGAGCTGTTCGCCCGCAAGTCCGTGGCGTCCTC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTGAGGACGCCACGGACTaGCGGGCGAACAGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSEDATD*RANSSP
Trigger: GGGGGAGCTGTTCGCCCGCAAGTCCGTGGCGTCCTC...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCTCCAGCGCGCGGATCTaGAGGCGCGCCAGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPSSARI*RRARPS
Trigger: AGAGGGCCTGGCGCGCCTCAAGATCCGCGCGCTGGA...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCACCACCTCCTGCTGCTaGCGGCTCAGCTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPTTSCC*RLSSCS
Trigger: GGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGGT...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCGCTCTGAGCCCCCGTaGGCAGCCTGGGCCCGTGTG +
Preference number: 5 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHRSEPP*AAWARV
Trigger: CACACGGGCCCAGGCTGCCAACGGGGGCTCAGAGCG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACAGCATTGCCAGGAACTaGGAGCAGACACGGGCATTC +
Preference number: 5 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDSIARN*EQTRAF
Trigger: GAATGCCCGTGTCTGCTCCAAGTTCCTGGCAATGCT...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACACCACTGAGCCAGCATaGCCAGGAACTTGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDTTEPA*PGTWSR
Trigger: TCTGCTCCAAGTTCCTGGCAATGCTGGCTCAGTGGT...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACAGCTACAGGGTGCAGTaGGCAAGGCAGGACCAAGAA +
Preference number: 5 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDSYRVQ*ARQDQE
Trigger: TTCTTGGTCCTGCCTTGCCAACTGCACCCTGTAGCT...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGCCGGCCGCCTGCTCCTaGCCCTGGAAGGAAGTGCTC +
Preference number: 5 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVPAACS*PWKEVL
Trigger: GAGCACTTCCTTCCAGGGCAAGGAGCAGGCGGCCGG...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCTCCAGCGCGCGGATCTaGAGGCGCGCCAGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQASSARI*RRARPS
Trigger: AGAGGGCCTGGCGCGCCTCAAGATCCGCGCGCTGGA...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CGCCATGGGAGCTGGGTGTGCTGCTGCGCCCATGGGATCCCAGCTCTGGAGGACTCTTGCTGCAAAGGATaGGGCCTGCTCACACACATC +
Preference number: 5 (lower is better)
Translates to: RHGSWVCCCAHGIPALEDSCCKG*GLLTHI
Trigger: GATGTGTGTGAGCAGGCCCAATCCTTTGCAGCAAGA...GTCCTCCAGAGCTGGGATCCCATGGGCGCAGCAGCACACCCAGCTCCCATGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGAGTGGCAGAGGAGGCTaGGCCTCACGGTGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRSGRGG*ASRWGA
Trigger: GGCTCCCCACCGTGAGGCCAAGCCTCCTCTGCCACT...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 90 bp ATCTGCACCACCTCCTGCTGCTTGCGGCTCAGCTCCTGTTCCTTGTaGACCAGGTCCTGCTTGAGTGAGGCCAGCAGCTCTACGCTCACG +
Preference number: 5 (lower is better)
Translates to: ICTTSCCLRLSSCSL*TRSCLSEASSSTLT
Trigger: CGTGAGCGTAGAGCTGCTGGCCTCACTCAAGCAGGACCTGGTGCACAAGGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGGTGCAGAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGATGCTGCAGCCGCAGCTaGGCGCTGGCCTCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGCCSRS*ALASRA
Trigger: GGCGCGGGAGGCCAGCGCCAAGCTGCGGCTGCAGCA...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACACGCTCTGAGCCCCCGTaGGCAGCCTGGGCCCGTGTG +
Preference number: 5 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTRSEPP*AAWARV
Trigger: CACACGGGCCCAGGCTGCCAACGGGGGCTCAGAGCG...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGCCCTCCCAGACAGCCTaGGTGACCCGAAGGCCATCG +
Preference number: 5 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRPSQTA*VTRRPS
Trigger: CGATGGCCTTCGGGTCACCAAGGCTGTCTGGGAGGG...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGCATCCCTTTGTGCTTaGTCTAGGAGACAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAASLCA*SRRQGR
Trigger: CCTTCCCTGTCTCCTAGACAAAGCACAAAGGGATGC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCCCGGCCGCCTGCTCCTaGCCCTGGAAGGAAGTGCTC +
Preference number: 5 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCPAACS*PWKEVL
Trigger: GAGCACTTCCTTCCAGGGCAAGGAGCAGGCGGCCGG...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTACCACCTCCTGCTGCTaGCGGCTCAGCTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSTTSCC*RLSSCS
Trigger: GGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGGT...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCGGGCTGATGACCTCATaGGAGCGTGAGGGGCTGACC +
Preference number: 5 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPGLMTS*EREGLT
Trigger: GGTCAGCCCCTCACGCTCCAATGAGGTCATCAGCCC...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGTCTCAAGCAGCACCCTaGTCCAGACTGCGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVSQAAP*SRLRGG
Trigger: GCCACCCCGCAGTCTGGACAAGGGTGCTGCTTGAGA...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCAGCATTGCCAGGAACTaGGAGCAGACACGGGCATTC +
Preference number: 5 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPSIARN*EQTRAF
Trigger: GAATGCCCGTGTCTGCTCCAAGTTCCTGGCAATGCT...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAGCAGAGCCTGGAGTTTaGTCACCATGTCCTCAAACA +
Preference number: 5 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAAEPGV*SPCPQT
Trigger: TGTTTGAGGACATGGTGACAAAACTCCAGGCTCTGC...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCCTGAGACCTGATCCTTaGGGGACTGCAAAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPLRPDP*GTAKAS
Trigger: ACTGGCCTTTGCAGTCCCCAAAGGATCAGGTCTCAG...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATAGTGGCAGAGGAGGCTaGGCCTCACGGTGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDSGRGG*ASRWGA
Trigger: GGCTCCCCACCGTGAGGCCAAGCCTCCTCTGCCACT...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCGGCCAGTTATGGAGGTaGCCCACCAGTGGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPGQLWR*PTSGAH
Trigger: GTGGGCACCACTGGTGGGCAACCTCCATAACTGGCC...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAGACGCAGGGCCGCCTaGGGGCCTCGGATCTCGTTC +
Preference number: 5 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCRRRAA*GPRISF
Trigger: GAACGAGATCCGAGGCCCCAAGGCGGCCCTGCGTCT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTCTGAGACCTGATCCTTaGGGGACTGCAAAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSLRPDP*GTAKAS
Trigger: ACTGGCCTTTGCAGTCCCCAAAGGATCAGGTCTCAG...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGATCCACAGCCTGGGCAGGCTGTCTGAAGGGGTGCCCCCAGAAGGCTGCAGCAAAGTTGCCTAGAGCCTaGTATTCAGGGATGGAAGGT +
Preference number: 5 (lower is better)
Translates to: GSTAWAGCLKGCPQKAAAKLPRA*YSGMEG
Trigger: ACCTTCCATCCCTGAATACAAGGCTCTAGGCAACTT...TGCTGCAGCCTTCTGGGGGCACCCCTTCAGACAGCCTGCCCAGGCTGTGGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCGGCCAGTTATGGAGGTaGCCCACCAGTGGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPGQLWR*PTSGAH
Trigger: GTGGGCACCACTGGTGGGCAACCTCCATAACTGGCC...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACGGCCAGTTATGGAGGTaGCCCACCAGTGGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHGQLWR*PTSGAH
Trigger: GTGGGCACCACTGGTGGGCAACCTCCATAACTGGCC...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGGGCTGATGACCTCATaGGAGCGTGAGGGGCTGACC +
Preference number: 5 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCGLMTS*EREGLT
Trigger: GGTCAGCCCCTCACGCTCCAATGAGGTCATCAGCCC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATTGGACCACAATGGACTaGAGGTTCCGGCAGATGCTG +
Preference number: 5 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDWTTMD*RFRQML
Trigger: CAGCATCTGCCGGAACCTCAAGTCCATTGTGGTCCA...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGTGGCAATCCCCCACCTaGGAAGGGTGGTCTCATCCT +
Preference number: 5 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVWQSPT*EGWSHP
Trigger: AGGATGAGACCACCCTTCCAAGGTGGGGGATTGCCA...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACACCCTCCCAGACAGCCTaGGTGACCCGAAGGCCATCG +
Preference number: 5 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTPSQTA*VTRRPS
Trigger: CGATGGCCTTCGGGTCACCAAGGCTGTCTGGGAGGG...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATAGCTACAGGGTGCAGTaGGCAAGGCAGGACCAAGAA +
Preference number: 5 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDSYRVQ*ARQDQE
Trigger: TTCTTGGTCCTGCCTTGCCAACTGCACCCTGTAGCT...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTCTGGAGCAGGGCTGCTaGCTCTCAGATATTCCTTTC +
Preference number: 5 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSLEQGC*LSDIPF
Trigger: GAAAGGAATATCTGAGAGCAAGCAGCCCTGCTCCAG...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCCTCAGCTCCTGTTCCTaGTGCACCAGGTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQALSSCS*CTRSCL
Trigger: CAAGCAGGACCTGGTGCACAAGGAACAGGAGCTGAG...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATCTCAAGCAGCACCCTaGTCCAGACTGCGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTSQAAP*SRLRGG
Trigger: GCCACCCCGCAGTCTGGACAAGGGTGCTGCTTGAGA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAGGCAGCACCTCTGGTTCTGGGGTCACAGGGAGCAGGAGCTACAGGGTGCAGTAAAACAGGAGCTGCCTaGATCCTTAGGTGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: KAAPLVLGSQGAGATGCSKTGAA*ILRWSL
Trigger: GAGAGACCACCTAAGGATCAAGGCAGCTCCTGTTTT...ACTGCACCCTGTAGCTCCTGCTCCCTGTGACCCCAGAACCAGAGGTGCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCCTCAGCTCCTGTTCCTaGTGCACCAGGTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCLSSCS*CTRSCL
Trigger: CAAGCAGGACCTGGTGCACAAGGAACAGGAGCTGAG...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGGGCTGATGACCTCATaGGAGCGTGAGGGGCTGACC +
Preference number: 5 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGGLMTS*EREGLT
Trigger: GGTCAGCCCCTCACGCTCCAATGAGGTCATCAGCCC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTTCTCAAGCAGCACCCTaGTCCAGACTGCGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SGGSLRNECRYRNVRLSASQAAP*SRLRGG
Trigger: GCCACCCCGCAGTCTGGACAAGGGTGCTGCTTGAGA...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCGTGAAGTGGTGCCACTaGGAGGGAGACGATCTCTCT +
Preference number: 5 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAVKWCH*EGDDLS
Trigger: AGAGAGATCGTCTCCCTCCAAGTGGCACCACTTCAC...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGTGAAGTGGTGCCACTaGGAGGGAGACGATCTCTCT +
Preference number: 5 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLVKWCH*EGDDLS
Trigger: AGAGAGATCGTCTCCCTCCAAGTGGCACCACTTCAC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGTTCCGGCAGATGCTGTaGAAGTGCAGTAGGGCCTTA +
Preference number: 5 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRFRQML*KCSRAL
Trigger: TAAGGCCCTACTGCACTTCAACAGCATCTGCCGGAA...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCACAGCCGCCTTCCACCTaGATGTGCAGAATCTTAGAG +
Preference number: 5 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPQPPST*MCRILE
Trigger: CTCTAAGATTCTGCACATCAAGGTGGAAGGCGGCTG...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGCAGCCGCCTTCCACCTaGATGTGCAGAATCTTAGAG +
Preference number: 5 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWQPPST*MCRILE
Trigger: CTCTAAGATTCTGCACATCAAGGTGGAAGGCGGCTG...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCGCCACTGGGTGGTTATaGCAGATCCTCCAGGTGATG +
Preference number: 5 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQAATGWL*QILQVM
Trigger: CATCACCTGGAGGATCTGCAATAACCACCCAGTGGC...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGGAGAAGAGCCCTCCTaGCCAAGTCTGAGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCGEEPS*PSLSCL
Trigger: AAGGCAGCTCAGACTTGGCAAGGAGGGCTCTTCTCC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATGTGCGCCTTTCAGCTTaGAATTTAGCTCTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDVRLSA*NLALVC
Trigger: GCACACCAGAGCTAAATTCAAAGCTGAAAGGCGCAC...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATGCTCTTCCTCTTCCTaGGCCCCATGGGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTCSSSS*APWVWL
Trigger: GAGCCAGACCCATGGGGCCAAGGAAGAGGAAGAGCA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGGCACAAGTCTGTCAGCCCCAGGGTGCGTGTGCAATGGAATACTCTGACCTCTGGGGGAGTGAGTCTATaGAGGATGCTCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GHKSVSPRVRVQWNTLTSGGVSL*RMLFLF
Trigger: GAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCC...AGAGGTCAGAGTATTCCATTGCACACGCACCCTGGGGCTGACAGACTTGTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGGGGGAGTGAGTCTATaGAGGATGCTCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWGGVSL*RMLFLF
Trigger: GAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACCTGAGACCTGATCCTTaGGGGACTGCAAAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHLRPDP*GTAKAS
Trigger: ACTGGCCTTTGCAGTCCCCAAAGGATCAGGTCTCAG...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CAGAAGCCAGGGATAACACTCGGCCTCCAAAGGTCTAGTCCAAACCAGGGTCCCTCAGCCTTTGGAGCCTaGGTTCTGAGACCTGATCCT +
Preference number: 5 (lower is better)
Translates to: QKPGITLGLQRSSPNQGPSAFGA*VLRPDP
Trigger: AGGATCAGGTCTCAGAACCAAGGCTCCAAAGGCTGA...GGGACCCTGGTTTGGACTAGACCTTTGGAGGCCGAGTGTTATCCCTGGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGGTCTAGTCCAAACCAGGGTCCCTCTGAGGTCCAAAGAGAGTGCCCTGGTGTGTCAGCCTTTGGAGCCTaGGTTCTGAGACCTGATCCT +
Preference number: 5 (lower is better)
Translates to: RSSPNQGPSEVQRECPGVSAFGA*VLRPDP
Trigger: AGGATCAGGTCTCAGAACCAAGGCTCCAAAGGCTGA...CACACCAGGGCACTCTCTTTGGACCTCAGAGGGACCCTGGTTTGGACTAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGAGAAAATCCTTCAGTaGGGCAGGCTCAAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: KVPGAEKILQLGRLKPSREKILQ*GRLKPS
Trigger: GCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTC...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGAGAAAATCCTTCAGTaGGGCAGGCTCAAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWEKILQ*GRLKPS
Trigger: GCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAAGGCTGTGGTGCTGGGCTGGGCAGGCCACCCACTCTTTATTCCTGCAGGGATACAGGAACTGGGACTTaGGCACCAATAGTCACTCTG +
Preference number: 5 (lower is better)
Translates to: KGCGAGLGRPPTLYSCRDTGTGT*APIVTL
Trigger: CAGAGTGACTATTGGTGCCAAAGTCCCAGTTCCTGT...ATCCCTGCAGGAATAAAGAGTGGGTGGCCTGCCCAGCCCAGCACCACAGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAGCATTGCCAGGAACTaGGAGCAGACACGGGCATTC +
Preference number: 5 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCSIARN*EQTRAF
Trigger: GAATGCCCGTGTCTGCTCCAAGTTCCTGGCAATGCT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCACCACTGAGCCAGCATaGCCAGGAACTTGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCTTEPA*PGTWSR
Trigger: TCTGCTCCAAGTTCCTGGCAATGCTGGCTCAGTGGT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATGTGAAGTGGTGCCACTaGGAGGGAGACGATCTCTCT +
Preference number: 5 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDVKWCH*EGDDLS
Trigger: AGAGAGATCGTCTCCCTCCAAGTGGCACCACTTCAC...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp TGGGGGAGGGTCTTCATGTCCAAGCCAGGTTGTGTTAGGAAGTTGGGTCCCTGGGTGCGCCTTTCAGCTTaGAATTTAGCTCTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: WGRVFMSKPGCVRKLGPWVRLSA*NLALVC
Trigger: GCACACCAGAGCTAAATTCAAAGCTGAAAGGCGCAC...CCAGGGACCCAACTTCCTAACACAACCTGGCTTGGACATGAAGACCCTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTTGCTCTTCCTCTTCCTaGGCCCCATGGGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SGGSLRNECRYRNVRLSACSSSS*APWVWL
Trigger: GAGCCAGACCCATGGGGCCAAGGAAGAGGAAGAGCA...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGCATCCCTTTGTGCTTaGTCTAGGAGACAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLASLCA*SRRQGR
Trigger: CCTTCCCTGTCTCCTAGACAAAGCACAAAGGGATGC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACTCTTGCTGCAAAGGATaGGGCCTGCTCACACACATC +
Preference number: 5 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHSCCKG*GLLTHI
Trigger: GATGTGTGTGAGCAGGCCCAATCCTTTGCAGCAAGA...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGTCTGACCTCTCATTCTaGCTGCAAAGGATTGGGCCT +
Preference number: 5 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRSDLSF*LQRIGP
Trigger: AGGCCCAATCCTTTGCAGCAAGAATGAGAGGTCAGA...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCATCTGACCTCTCATTCTaGCTGCAAAGGATTGGGCCT +
Preference number: 5 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPSDLSF*LQRIGP
Trigger: AGGCCCAATCCTTTGCAGCAAGAATGAGAGGTCAGA...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCCTGGAGCAGGGCTGCTaGCTCTCAGATATTCCTTTC +
Preference number: 5 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQALEQGC*LSDIPF
Trigger: GAAAGGAATATCTGAGAGCAAGCAGCCCTGCTCCAG...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTCTGGAGCAGGGCTGCTaGCTCTCAGATATTCCTTTC +
Preference number: 5 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLLEQGC*LSDIPF
Trigger: GAAAGGAATATCTGAGAGCAAGCAGCCCTGCTCCAG...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGATGGAAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAACAGGAACTGGGACTTaGGCACCAATAGTCACTCTG +
Preference number: 5 (lower is better)
Translates to: GWKVPGAEKILQLGRLKPTGTGT*APIVTL
Trigger: CAGAGTGACTATTGGTGCCAAAGTCCCAGTTCCTGT...TGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTTCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTAACTTCTCTGGGCATTaGGGCCTTACACCCACTCAC +
Preference number: 5 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLNFSGH*GLTPTH
Trigger: GTGAGTGGGTGTAAGGCCCAAATGCCCAGAGAAGTT...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GCTCTGGAGGACTCTTTACAAGGTAACCTGGGGGAGGGTCTTCATGTCCAAGCCAACTTCTCTGGGCATTaGGGCCTTACACCCACTCAC +
Preference number: 5 (lower is better)
Translates to: ALEDSLQGNLGEGLHVQANFSGH*GLTPTH
Trigger: GTGAGTGGGTGTAAGGCCCAAATGCCCAGAGAAGTT...GGCTTGGACATGAAGACCCTCCCCCAGGTTACCTTGTAAAGAGTCCTCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGACTCAGCTCCTGTTCCTaGTGCACCAGGTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGLSSCS*CTRSCL
Trigger: CAAGCAGGACCTGGTGCACAAGGAACAGGAGCTGAG...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATTTCCGGCAGATGCTGTaGAAGTGCAGTAGGGCCTTA +
Preference number: 5 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDFRQML*KCSRAL
Trigger: TAAGGCCCTACTGCACTTCAACAGCATCTGCCGGAA...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTGCAGAGCCTGGAGTTTaGTCACCATGTCCTCAAACA +
Preference number: 5 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLAEPGV*SPCPQT
Trigger: TGTTTGAGGACATGGTGACAAAACTCCAGGCTCTGC...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CTTTGTGCTTTGTCTAGGAGACAGGGAAGGCAGCACCTCTGGTTCTGGGGTCACGCAGAGCCTGGAGTTTaGTCACCATGTCCTCAAACA +
Preference number: 5 (lower is better)
Translates to: LCALSRRQGRQHLWFWGHAEPGV*SPCPQT
Trigger: TGTTTGAGGACATGGTGACAAAACTCCAGGCTCTGC...GTGACCCCAGAACCAGAGGTGCTGCCTTCCCTGTCTCCTAGACAAAGCACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAGCCACTGGGTGGTTATaGCAGATCCTCCAGGTGATG +
Preference number: 5 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTATGWL*QILQVM
Trigger: CATCACCTGGAGGATCTGCAATAACCACCCAGTGGC...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTGGAGAAGAGCCCTCCTaGCCAAGTCTGAGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAGEEPS*PSLSCL
Trigger: AAGGCAGCTCAGACTTGGCAAGGAGGGCTCTTCTCC...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGGAGAAGAGCCCTCCTaGCCAAGTCTGAGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGGEEPS*PSLSCL
Trigger: AAGGCAGCTCAGACTTGGCAAGGAGGGCTCTTCTCC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGATGGCAATCCCCCACCTaGGAAGGGTGGTCTCATCCT +
Preference number: 5 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGWQSPT*EGWSHP
Trigger: AGGATGAGACCACCCTTCCAAGGTGGGGGATTGCCA...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAAGCTACAGGGTGCAGTaGGCAAGGCAGGACCAAGAA +
Preference number: 5 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTSYRVQ*ARQDQE
Trigger: TTCTTGGTCCTGCCTTGCCAACTGCACCCTGTAGCT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCGCATCCCTTTGTGCTTaGTCTAGGAGACAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCASLCA*SRRQGR
Trigger: CCTTCCCTGTCTCCTAGACAAAGCACAAAGGGATGC...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCCCACCCAGAGAGAAGTaGCCTAGAGCCTTGTATTCA +
Preference number: 5 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPPPREK*PRALYS
Trigger: TGAATACAAGGCTCTAGGCAACTTCTCTCTGGGTGG...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCTCTTGCTGCAAAGGATaGGGCCTGCTCACACACATC +
Preference number: 5 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCSCCKG*GLLTHI
Trigger: GATGTGTGTGAGCAGGCCCAATCCTTTGCAGCAAGA...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GGTAGAAACACCAAGTGGCCACCCCCACTGGGCCTCTACACATACCTGGGGCCCTCAGATATTCCTTTCTaGCATCTTACTGGGTATGAG +
Preference number: 5 (lower is better)
Translates to: GRNTKWPPPLGLYTYLGPSDIPF*HLTGYE
Trigger: CTCATACCCAGTAAGATGCAAGAAAGGAATATCTGA...GGGCCCCAGGTATGTGTAGAGGCCCAGTGGGGGTGGCCACTTGGTGTTTCTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACATTCCGGCAGATGCTGTaGAAGTGCAGTAGGGCCTTA +
Preference number: 5 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTFRQML*KCSRAL
Trigger: TAAGGCCCTACTGCACTTCAACAGCATCTGCCGGAA...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGATGGACCACAATGGACTaGAGGTTCCGGCAGATGCTG +
Preference number: 5 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGWTTMD*RFRQML
Trigger: CAGCATCTGCCGGAACCTCAAGTCCATTGTGGTCCA...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTTGGACCACAATGGACTaGAGGTTCCGGCAGATGCTG +
Preference number: 5 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAWTTMD*RFRQML
Trigger: CAGCATCTGCCGGAACCTCAAGTCCATTGTGGTCCA...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGGGGAGTGAGTCTATaGAGGATGCTCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLGGVSL*RMLFLF
Trigger: GAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCC...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp ACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTGGCCCCAAGTTGCCTAGAGCCTaGTATTCAGGGATGGAAGGT +
Preference number: 5 (lower is better)
Translates to: TKEGGVSLLRMLFLFLGPKLPRA*YSGMEG
Trigger: ACCTTCCATCCCTGAATACAAGGCTCTAGGCAACTT...GGGGCCAAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp ACCAGGAGTGGGGAAATAGGCAGGACCCAAAGGCAAGGGATGGAGCCAAACCTTAAGTTGCCTAGAGCCTaGTATTCAGGGATGGAAGGT +
Preference number: 5 (lower is better)
Translates to: TRSGEIGRTQRQGMEPNLKLPRA*YSGMEG
Trigger: ACCTTCCATCCCTGAATACAAGGCTCTAGGCAACTT...AAGGTTTGGCTCCATCCCTTGCCTTTGGGTCCTGCCTATTTCCCCACTCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp GTACTTAAGCCAAGTACACCAACCTCCCAGGTAGGTACTGGGGCCAGACTGGATCCACCCAGAGAGAAGTaGCCTAGAGCCTTGTATTCA +
Preference number: 5 (lower is better)
Translates to: VLKPSTPTSQVGTGARLDPPREK*PRALYS
Trigger: TGAATACAAGGCTCTAGGCAACTTCTCTCTGGGTGG...ATCCAGTCTGGCCCCAGTACCTACCTGGGAGGTTGGTGTACTTGGCTTAAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGGCATCCCTTTGTGCAAAACAGGAGCTGCCTaGATCCTTAGGTGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: RENPSVGQAQAKQGIPLCKTGAA*ILRWSL
Trigger: GAGAGACCACCTAAGGATCAAGGCAGCTCCTGTTTT...GCACAAAGGGATGCCCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAAACTTCTCTGGGCATTaGGGCCTTACACCCACTCAC +
Preference number: 5 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTNFSGH*GLTPTH
Trigger: GTGAGTGGGTGTAAGGCCCAAATGCCCAGAGAAGTT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 90 bp CTTTCCAACGGCCTCAGTAAGGTCCAACAAGCAAGAGACACACTCTaGTTGAAAGGAGCCCATCATTCAGTCAAGCATGTGGACCACGGT +
Preference number: 5 (lower is better)
Translates to: LSNGLSKVQQARDTL*LKGAHHSVKHVDHG
Trigger: ACCGTGGTCCACATGCTTGACTGAATGATGGGCTCCTTTCAACCAGAGTGTGTCTCTTGCTTGTTGGACCTTACTGAGGCCGTTGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520186.1
CDS-3UTR CAA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGACAGCCGCCTTCCACCTaGATGTGCAGAATCTTAGAG +
Preference number: 5 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGQPPST*MCRILE
Trigger: CTCTAAGATTCTGCACATCAAGGTGGAAGGCGGCTG...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGATCAGCCTTTGGAGCCTaGGTTCTGAGACCTGATCCT +
Preference number: 5 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGSAFGA*VLRPDP
Trigger: AGGATCAGGTCTCAGAACCAAGGCTCCAAAGGCTGA...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAGAGAAAATCCTTCAGTaGGGCAGGCTCAAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGEKILQ*GRLKPS
Trigger: GCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTC...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AGGCAATTCCTGAGGGGCTGGCTCAGACTCGAGTGTCACAGAACCAAGAAAACAAAAACAGGAGCTGCCTaGATCCTTAGGTGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: RQFLRGWLRLECHRTKKTKTGAA*ILRWSL
Trigger: GAGAGACCACCTAAGGATCAAGGCAGCTCCTGTTTT...TGTTTTCTTGGTTCTGTGACACTCGAGTCTGAGCCAGCCCCTCAGGAATTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp TCTGGAGGGTCCCTCAGGAATGAATGTAGGTATAGAAACGTGCGCCTTTCAGCTCCACCCAGAGAGAAGTaGCCTAGAGCCTTGTATTCA +
Preference number: 5 (lower is better)
Translates to: SGGSLRNECRYRNVRLSAPPREK*PRALYS
Trigger: TGAATACAAGGCTCTAGGCAACTTCTCTCTGGGTGG...AGCTGAAAGGCGCACGTTTCTATACCTACATTCATTCCTGAGGGACCCTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp AAGGTCCCTGGGGCAGAGAAAATCCTTCAGTTGGGCAGGCTCAAGCCAAGCAGGTCAGATATTCCTTTCTaGCATCTTACTGGGTATGAG +
Preference number: 5 (lower is better)
Translates to: KVPGAEKILQLGRLKPSRSDIPF*HLTGYE
Trigger: CTCATACCCAGTAAGATGCAAGAAAGGAATATCTGA...CCTGCTTGGCTTGAGCCTGCCCAACTGAAGGATTTTCTCTGCCCCAGGGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS-3UTR CAA 90 bp CATCGGGTTCCTGCCCAAGCACCTGGATTAGAAGGAAATTCCTTAAGGACAGGAACAGGAACTGGGACTTaGGCACCAATAGTCACTCTG +
Preference number: 5 (lower is better)
Translates to: HRVPAQAPGLEGNSLRTGTGTGT*APIVTL
Trigger: CAGAGTGACTATTGGTGCCAAAGTCCCAGTTCCTGT...TCCTGTCCTTAAGGAATTTCCTTCTAATCCAGGTGCTTGGGCAGGAACCCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 90 bp ACCATAGGGAACCATCCTTCCCCACTTTCTCAGTCCACATGGTCTTaGGGATATGACATAGACCTGGCAAATCAGTCGTGGGGTAAACAT +
Preference number: 5 (lower is better)
Translates to: TIGNHPSPLSQSTWS*GYDIDLANQSWGKH
Trigger: ATGTTTACCCCACGACTGATTTGCCAGGTCTATGTCATATCCCCAAGACCATGTGGACTGAGAAAGTGGGGAAGGATGGTTCCCTATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520186.1
CDS-3UTR CAA 90 bp GTGGAGACCAAGGAAGGGGGAGTGAGTCTATTGAGGATGCTCTTCCTCTTCCTTTCAGATATTCCTTTCTaGCATCTTACTGGGTATGAG +
Preference number: 5 (lower is better)
Translates to: VETKEGGVSLLRMLFLFLSDIPF*HLTGYE
Trigger: CTCATACCCAGTAAGATGCAAGAAAGGAATATCTGA...AAGGAAGAGGAAGAGCATCCTCAATAGACTCACTCCCCCTTCCTTGGTCTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CAA 90 bp CCGGGGCCAGGCGGCGGCGTCGAGCACGCCGAGGACGCCACGGACTaGCGGGCGAACAGCTCCCCCAGCGGGATCTCGATCTCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: PGPGGGVEHAEDATD*RANSSPSGISISRS
Trigger: GCTGCGCGAGATCGAGATCCCGCTGGGGGAGCTGTTCGCCCGCAAGTCCGTGGCGTCCTCGGCGTGCTCGACGCCGCCGCCTGGCCCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp GCGGCGCCGCGGGCGACGGCCCGGCCGCCTGCTCCTTaGCCTGGAAGGAAGTGCTCTCGAAGACCTCTCGCC +
Preference number: 6 (lower is better)
Translates to: AAPRATARPPAP*PGRKCSRRPLA
Trigger: GGCGAGAGGTCTTCGAGAGCACTTCCTTCCAGGGCAAGGAGCAGGCGGCCGGGCCGTCGCCCGCGGCGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 72 bp GCCGCGGGCGACGGCCCGGCCGCCTGCTCCTTGCCCTaGAAGGAAGTGCTCTCGAAGACCTCTCGCCGGGCG +
Preference number: 6 (lower is better)
Translates to: AAGDGPAACSLP*KEVLSKTSRRA
Trigger: CGCCCGGCGAGAGGTCTTCGAGAGCACTTCCTTCCAGGGCAAGGAGCAGGCGGCCGGGCCGTCGCCCGCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 72 bp AGCCCCCGCGTGCCCGGTCCAGACGCAGGGCCGCCTTaGGGCCTCGGATCTCGTTCCCCTCCGCAGCCTTGG +
Preference number: 6 (lower is better)
Translates to: SPRVPGPDAGPP*GLGSRSPPQPW
Trigger: CCAAGGCTGCGGAGGGGAACGAGATCCGAGGCCCCAAGGCGGCCCTGCGTCTGGACCGGGCACGCGGGGGCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000520186.1
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp ACGGCCCGGCCGCCTGCTCCTTGCCCTGGAAGGAAGTaGTCTCGAAGACCTCTCGCCGGGCGCCGGGCACGG +
Preference number: 6 (lower is better)
Translates to: TARPPAPCPGRK*SRRPLAGRRAR
Trigger: CCGTGCCCGGCGCCCGGCGAGAGGTCTTCGAGAGCACTTCCTTCCAGGGCAAGGAGCAGGCGGCCGGGCCGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 72 bp AGCGGGAGGGGCGCACGAACCCGGCGGGAGGAAGGATaGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: SGRGARTRREEG*RRRRRRRGRRG
Trigger: CCCCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCCATCCTTCCTCCCGCCGGGTTCGTGCGCCCCTCCCGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000520186.1
ENST00000520530.3
ENST00000521871.5
CDS CAA 72 bp TGCGGCGCCGCGGGCGACGGCCCGGCCGCCTGCTCCTaGCCCTGGAAGGAAGTGCTCTCGAAGACCTCTCGC +
Preference number: 6 (lower is better)
Translates to: CGAAGDGPAACS*PWKEVLSKTSR
Trigger: GCGAGAGGTCTTCGAGAGCACTTCCTTCCAGGGCAAGGAGCAGGCGGCCGGGCCGTCGCCCGCGGCGCCGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp CGGCGGCGGCCGCGGCGGCGGCGGCGCCGTCGCAGATaGTGTTGGTCTTGGAGAGGATGTAGAGCGTCTCGT +
Preference number: 6 (lower is better)
Translates to: RRRPRRRRRRRR*CWSWRGCRASR
Trigger: ACGAGACGCTCTACATCCTCTCCAAGACCAACAGCATCTGCGACGGCGCCGCCGCCGCCGCGGCCGCCGCCG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp CGGGATCTCGATCTCGCGCAGCGCATAGCGCGCTGCTaGGGCGGGCACAAGGCCCGGCTCGGCCAACTCCTC +
Preference number: 6 (lower is better)
Translates to: RDLDLAQRIARC*GGHKARLGQLL
Trigger: GAGGAGTTGGCCGAGCCGGGCCTTGTGCCCGCCGCAGCAGCGCGCTATGCGCTGCGCGAGATCGAGATCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp GCGGCGGCGTCGAGCACGCCGAGGACGCCACGGACTTaGGGGCGAACAGCTCCCCCAGCGGGATCTCGATCT +
Preference number: 6 (lower is better)
Translates to: AAASSTPRTPRT*GRTAPPAGSRS
Trigger: AGATCGAGATCCCGCTGGGGGAGCTGTTCGCCCGCAAGTCCGTGGCGTCCTCGGCGTGCTCGACGCCGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 72 bp TGCTGTGTCGGCGGGGTCTGCGCTGCCAGTTCTGGATaGCCTGGCGCCGCAGGCCTGAGCTGCGAGGGGGCT +
Preference number: 6 (lower is better)
Translates to: CCVGGVCAASSG*PGAAGLSCEGA
Trigger: AGCCCCCTCGCAGCTCAGGCCTGCGGCGCCAGGCCATCCAGAACTGGCAGCGCAGACCCCGCCGACACAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp AGCTCCTCCTTCTCGCGCCCGAGCCTCGCACTCTCCTaGCGCGCAGTCTCCAGTTCGGCCGCCTTGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SSSFSRPSLALS*RAVSSSAALRS
Trigger: GGAGCGCAAGGCGGCCGAACTGGAGACTGCGCGGCAGGAGAGTGCGAGGCTCGGGCGCGAGAAGGAGGAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp CGGTCAGCCCGCTCAAGGAGCTCCTCAATGAACTGCTaGAGCCGCAGCTTGGCGCTGGCCTCCCGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: RSARSRSSSMNC*SRSLALASRAA
Trigger: GGCGGCGCGGGAGGCCAGCGCCAAGCTGCGGCTGCAGCAGTTCATTGAGGAGCTCCTTGAGCGGGCTGACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295133.9
ENST00000519873.1
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp GCGCTGGGCGTGCTGCCACAGCTGCTGCTGATGACCTaGAGCTGCCGCTCGGCACGGTCAGCCCGCTCAAGG +
Preference number: 6 (lower is better)
Translates to: ALGVLPQLLLMT*SCRSARSARSR
Trigger: CCTTGAGCGGGCTGACCGTGCCGAGCGGCAGCTGCAGGTCATCAGCAGCAGCTGTGGCAGCACGCCCAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295133.9
ENST00000519873.1
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp CACCCTCTTCCCCCTCAGTGCTGTGTCGGCGGGGTCTaGGCTGCCAGTTCTGGATGGCCTGGCGCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: HPLPPQCCVGGV*AASSGWPGAAG
Trigger: GCCTGCGGCGCCAGGCCATCCAGAACTGGCAGCGCAGACCCCGCCGACACAGCACTGAGGGGGAAGAGGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 72 bp TCAGTGCTGTGTCGGCGGGGTCTGCGCTGCCAGTTCTaGATGGCCTGGCGCCGCAGGCCTGAGCTGCGAGGG +
Preference number: 6 (lower is better)
Translates to: SVLCRRGLRCQF*MAWRRRPELRG
Trigger: CCCTCGCAGCTCAGGCCTGCGGCGCCAGGCCATCCAGAACTGGCAGCGCAGACCCCGCCGACACAGCACTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 72 bp GCGCTGGCCTCCCGCGCCGCCGTCTCCTTCAGGAACTaGTCGATCTGCACCACCTCCCTGGGCCCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: ALASRAAVSFRN*SICTTSLGPEQ
Trigger: CTGCTCTGGGCCCAGGGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGACGGCGGCGCGGGAGGCCAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519873.1
CDS TCA 72 bp CCCGGGGCGGGGCGCATCCAACGGGCCCTCAGCCTCTaGCTCAGTGGTTCGGGAGCCAACGTCGGAGACATC +
Preference number: 6 (lower is better)
Translates to: PGAGRIQRALSL*LSGSGANVGDI
Trigger: GATGTCTCCGACGTTGGCTCCCGAACCACTGAGTCAGAGGCTGAGGGCCCGTTGGATGCGCCCCGCCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp TCTTCCCCCTCAGTGCTGTGTCGGCGGGGTCTGCGCTaGCAGTTCTGGATGGCCTGGCGCCGCAGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: SSPSVLCRRGLR*QFWMAWRRRPE
Trigger: CTCAGGCCTGCGGCGCCAGGCCATCCAGAACTGGCAGCGCAGACCCCGCCGACACAGCACTGAGGGGGAAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 72 bp GCGCTGGCCTCCCGCGCCGCCGTCTCCTTCAGGAACTaGTCGATCTGCACCACCTCCTGCTGCTTGCGGCTC +
Preference number: 6 (lower is better)
Translates to: ALASRAAVSFRN*SICTTSCCLRL
Trigger: GAGCCGCAAGCAGCAGGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGACGGCGGCGCGGGAGGCCAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS TCA 72 bp GCTCGGCACGGTCAGCCCGCTCAAGGAGCTCCTCAATaGACTGCTGCAGCCGCAGCTTGGCGCTGGCCTCCC +
Preference number: 6 (lower is better)
Translates to: ARHGQPAQGAPQ*TAAAAAWRWPP
Trigger: GGGAGGCCAGCGCCAAGCTGCGGCTGCAGCAGTTCATTGAGGAGCTCCTTGAGCGGGCTGACCGTGCCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295133.9
ENST00000519873.1
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp GACACGGGCATTCTCAAGCAGCACCCTTGTCCAGACTaGGGGGTGGCGGGCCACGAAGCGCCAGTCCCGGCA +
Preference number: 6 (lower is better)
Translates to: DTGILKQHPCPD*GVAGHEAPVPA
Trigger: TGCCGGGACTGGCGCTTCGTGGCCCGCCACCCCGCAGTCTGGACAAGGGTGCTGCTTGAGAATGCCCGTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 72 bp GCATTCTCAAGCAGCACCCTTGTCCAGACTGCGGGGTaGCGGGCCACGAAGCGCCAGTCCCGGCAGACCTCG +
Preference number: 6 (lower is better)
Translates to: AFSSSTLVQTAG*RATKRQSRQTS
Trigger: CGAGGTCTGCCGGGACTGGCGCTTCGTGGCCCGCCACCCCGCAGTCTGGACAAGGGTGCTGCTTGAGAATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CAA 90 bp TCAGCCCGCTCAAGGAGCTCCTCAATGAACTGCTGCAGCCGCAGCTaGGCGCTGGCCTCCCGCGCCGCCGTCTCCTTCAGGAACTGGTCG +
Preference number: 6 (lower is better)
Translates to: SARSRSSSMNCCSRS*ALASRAAVSFRNWS
Trigger: CGACCAGTTCCTGAAGGAGACGGCGGCGCGGGAGGCCAGCGCCAAGCTGCGGCTGCAGCAGTTCATTGAGGAGCTCCTTGAGCGGGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295133.9
ENST00000519873.1
ENST00000520530.3
ENST00000521871.5
CDS CCA 72 bp TTGAGTGAGGCCAGCAGCTCTACGCTCACGTCCACCTaGCGGGAGAGCTCAGACGCGCGCTCCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LSEASSSTLTST*RESSDARSSSS
Trigger: GGAGCTGGAGGAGCGCGCGTCTGAGCTCTCCCGCCAGGTGGACGTGAGCGTAGAGCTGCTGGCCTCACTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CAA 72 bp TCAAGGAGCTCCTCAATGAACTGCTGCAGCCGCAGCTaGGCGCTGGCCTCCCGCGCCGCCGTCTCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: SRSSSMNCCSRS*ALASRAAVSFR
Trigger: CCTGAAGGAGACGGCGGCGCGGGAGGCCAGCGCCAAGCTGCGGCTGCAGCAGTTCATTGAGGAGCTCCTTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295133.9
ENST00000519873.1
ENST00000520530.3
ENST00000521871.5
CDS CAA 72 bp GCGTGTGGGCTGCTGGCAGGGGTGAAGTGGTGCCACTaGGAGGGAGACGATCTCTCTGCAGCCTGCGCCCAG +
Preference number: 6 (lower is better)
Translates to: ACGLLAGVKWCH*EGDDLSAACAQ
Trigger: CTGGGCGCAGGCTGCAGAGAGATCGTCTCCCTCCAAGTGGCACCACTTCACCCCTGCCAGCAGCCCACACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CAA 90 bp TTGCCAGGAACTTGGAGCAGACACGGGCATTCTCAAGCAGCACCCTaGTCCAGACTGCGGGGTGGCGGGCCACGAAGCGCCAGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: LPGTWSRHGHSQAAP*SRLRGGGPRSASPG
Trigger: GCCGGGACTGGCGCTTCGTGGCCCGCCACCCCGCAGTCTGGACAAGGGTGCTGCTTGAGAATGCCCGTGTCTGCTCCAAGTTCCTGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS TCA 72 bp CCTGGGCAGCTCCAGACTGTCACTGTCATAGCAGCCTaGGCTCTGGGATGCGGCTGGCACACGGCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: PGQLQTVTVIAA*ALGCGWHTAGG
Trigger: GCCTCCAGCCGTGTGCCAGCCGCATCCCAGAGCTCAGGCTGCTATGACAGTGACAGTCTGGAGCTGCCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295133.9
ENST00000519873.1
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp TGGTGCCACTTGGAGGGAGACGATCTCTCTGCAGCCTaGGCCCAGGGCCCAAATGACCTCATGGCCCACGGG +
Preference number: 6 (lower is better)
Translates to: WCHLEGDDLSAA*AQGPNDLMAHG
Trigger: CCCGTGGGCCATGAGGTCATTTGGGCCCTGGGCGCAGGCTGCAGAGAGATCGTCTCCCTCCAAGTGGCACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp TCCCGCGCCGCCGTCTCCTTCAGGAACTGGTCGATCTaGACCACCTCCCTGGGCCCAGAGCAGTCTCTTACC +
Preference number: 6 (lower is better)
Translates to: SRAAVSFRNWSI*TTSLGPEQSLT
Trigger: GGTAAGAGACTGCTCTGGGCCCAGGGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGACGGCGGCGCGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519873.1
CDS CCA 72 bp CGGCGGCGGCGGCGCCGTCGCAGATGCTGTTGGTCTTaGAGAGGATGTAGAGCGTCTCGTAGGTGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: RRRRRRRRCCWS*RGCRASRRCGC
Trigger: ACAGCCACACCTACGAGACGCTCTACATCCTCTCCAAGACCAACAGCATCTGCGACGGCGCCGCCGCCGCCG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CAA 72 bp ACTTGGAGCAGACACGGGCATTCTCAAGCAGCACCCTaGTCCAGACTGCGGGGTGGCGGGCCACGAAGCGCC +
Preference number: 6 (lower is better)
Translates to: TWSRHGHSQAAP*SRLRGGGPRSA
Trigger: GGCGCTTCGTGGCCCGCCACCCCGCAGTCTGGACAAGGGTGCTGCTTGAGAATGCCCGTGTCTGCTCCAAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS TCA 72 bp AGACGATCTCTCTGCAGCCTGCGCCCAGGGCCCAAATaGCCTCATGGCCCACGGGGTCTGTGGCACTCCTGT +
Preference number: 6 (lower is better)
Translates to: RRSLCSLRPGPK*PHGPRGLWHSC
Trigger: ACAGGAGTGCCACAGACCCCGTGGGCCATGAGGTCATTTGGGCCCTGGGCGCAGGCTGCAGAGAGATCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp AGCCAACGTCGGAGACATCACCCTCTTCCCCCTCAGTaGTGTGTCGGCGGGGTCTGCGCTGCCAGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: SQRRRHHPLPPQ*CVGGVCAASSG
Trigger: TCCAGAACTGGCAGCGCAGACCCCGCCGACACAGCACTGAGGGGGAAGAGGGTGATGTCTCCGACGTTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 72 bp GGGGCGCATCCAACGGGCCCTCAGCCTCTGACTCAGTaGTTCGGGAGCCAACGTCGGAGACATCACCCTCTT +
Preference number: 6 (lower is better)
Translates to: GAHPTGPQPLTQ*FGSQRRRHHPL
Trigger: AAGAGGGTGATGTCTCCGACGTTGGCTCCCGAACCACTGAGTCAGAGGCTGAGGGCCCGTTGGATGCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 72 bp TCTCTGCAGCCTGCGCCCAGGGCCCAAATGACCTCATaGCCCACGGGGTCTGTGGCACTCCTGTACGTGACA +
Preference number: 6 (lower is better)
Translates to: SLQPAPRAQMTS*PTGSVALLYVT
Trigger: TGTCACGTACAGGAGTGCCACAGACCCCGTGGGCCATGAGGTCATTTGGGCCCTGGGCGCAGGCTGCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CAA 90 bp TGCTGCTTGCGGCTCAGCTCCTGTTCCTTGTGCACCAGGTCCTGCTaGAGTGAGGCCAGCAGCTCTACGCTCACGTCCACCTGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: CCLRLSSCSLCTRSC*SEASSSTLTSTWRE
Trigger: CTCCCGCCAGGTGGACGTGAGCGTAGAGCTGCTGGCCTCACTCAAGCAGGACCTGGTGCACAAGGAACAGGAGCTGAGCCGCAAGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CAA 90 bp AAGAGGGCAGCTCGCATCTTCAGGATCTCTGGGCTGATGACCTCATaGGAGCGTGAGGGGCTGACCCTCTCTGCTCGCCGACCCCGCCCA +
Preference number: 6 (lower is better)
Translates to: KRAARIFRISGLMTS*EREGLTLSARRPRP
Trigger: TGGGCGGGGTCGGCGAGCAGAGAGGGTCAGCCCCTCACGCTCCAATGAGGTCATCAGCCCAGAGATCCTGAAGATGCGAGCTGCCCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS TCA 72 bp GGCAGTAGCAGCTGGCCAGCCAGAGCGAGCGGTCGGTaGGGATGTTTGGACAGTGGGAGATGCGCAGGATCA +
Preference number: 6 (lower is better)
Translates to: GSSSWPARASGR*GCLDSGRCAGS
Trigger: TGATCCTGCGCATCTCCCACTGTCCAAACATCCTCACCGACCGCTCGCTCTGGCTGGCCAGCTGCTACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CAA 72 bp CGGCTCAGCTCCTGTTCCTTGTGCACCAGGTCCTGCTaGAGTGAGGCCAGCAGCTCTACGCTCACGTCCACC +
Preference number: 6 (lower is better)
Translates to: RLSSCSLCTRSC*SEASSSTLTST
Trigger: GGTGGACGTGAGCGTAGAGCTGCTGGCCTCACTCAAGCAGGACCTGGTGCACAAGGAACAGGAGCTGAGCCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp TTGCGGCTCAGCTCCTGTTCCTTGTGCACCAGGTCCTaGTTGAGTGAGGCCAGCAGCTCTACGCTCACGTCC +
Preference number: 6 (lower is better)
Translates to: LRLSSCSLCTRS*LSEASSSTLTS
Trigger: GGACGTGAGCGTAGAGCTGCTGGCCTCACTCAAGCAGGACCTGGTGCACAAGGAACAGGAGCTGAGCCGCAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp ACCTCCTGCTGCTTGCGGCTCAGCTCCTGTTCCTTGTaGACCAGGTCCTGCTTGAGTGAGGCCAGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: TSCCLRLSSCSL*TRSCLSEASSS
Trigger: AGAGCTGCTGGCCTCACTCAAGCAGGACCTGGTGCACAAGGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS CCA 72 bp TCTCCTTCAGGAACTGGTCGATCTGCACCACCTCCCTaGGCCCAGAGCAGTCTCTTACCCCAGAGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: SPSGTGRSAPPP*AQSSLLPQSLS
Trigger: GCTGAGGCTCTGGGGTAAGAGACTGCTCTGGGCCCAGGGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519873.1
CDS CAA 72 bp GCTCGCATCTTCAGGATCTCTGGGCTGATGACCTCATaGGAGCGTGAGGGGCTGACCCTCTCTGCTCGCCGA +
Preference number: 6 (lower is better)
Translates to: ARIFRISGLMTS*EREGLTLSARR
Trigger: TCGGCGAGCAGAGAGGGTCAGCCCCTCACGCTCCAATGAGGTCATCAGCCCAGAGATCCTGAAGATGCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp TGGGTGATCTCTGACACGTGGTCAAGCTCCAGGACCTaGAGCCGCATGCAGTTTCTCGCGAGTGATGCCAGG +
Preference number: 6 (lower is better)
Translates to: WVISDTWSSSRT*SRMQFLASDAR
Trigger: CCTGGCATCACTCGCGAGAAACTGCATGCGGCTGCAGGTCCTGGAGCTTGACCACGTGTCAGAGATCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295133.9
ENST00000520530.3
ENST00000521871.5
CDS GCA 72 bp GCCCAGCATCCAGTCCTCCTCCTGGTAACAGCACCCTaGTTTGACCATAGGGAACCATCCTTCCCCACTTTC +
Preference number: 6 (lower is better)
Translates to: AQHPVLLLVTAP*FDHREPSFPTF
Trigger: GAAAGTGGGGAAGGATGGTTCCCTATGGTCAAAGCAGGGTGCTGTTACCAGGAGGAGGACTGGATGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520186.1
CDS CAA 90 bp TCCAACGGCCTCAGTAAGGTCCAACAAGCAAGAGACACACTCTGGTaGAAAGGAGCCCATCATTCAGTCAAGCATGTGGACCACGGTCCA +
Preference number: 6 (lower is better)
Translates to: SNGLSKVQQARDTLW*KGAHHSVKHVDHGP
Trigger: TGGACCGTGGTCCACATGCTTGACTGAATGATGGGCTCCTTTCAACCAGAGTGTGTCTCTTGCTTGTTGGACCTTACTGAGGCCGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520186.1
CDS TCA 72 bp CAAATCAGTCGTGGGGTAAACATAGAGCACCAAAGTTaGGCCAGTGAGCCCCAGGACTGTTCTGGAATGACT +
Preference number: 6 (lower is better)
Translates to: QISRGVNIEHQS*ASEPQDCSGMT
Trigger: AGTCATTCCAGAACAGTCCTGGGGCTCACTGGCTCAACTTTGGTGCTCTATGTTTACCCCACGACTGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520186.1
CDS CCA 72 bp GGCCTCAGTAAGGTCCAACAAGCAAGAGACACACTCTaGTTGAAAGGAGCCCATCATTCAGTCAAGCATGTG +
Preference number: 6 (lower is better)
Translates to: GLSKVQQARDTL*LKGAHHSVKHV
Trigger: CACATGCTTGACTGAATGATGGGCTCCTTTCAACCAGAGTGTGTCTCTTGCTTGTTGGACCTTACTGAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520186.1
CDS CCA 72 bp AACCATCCTTCCCCACTTTCTCAGTCCACATGGTCTTaGGGATATGACATAGACCTGGCAAATCAGTCGTGG +
Preference number: 6 (lower is better)
Translates to: NHPSPLSQSTWS*GYDIDLANQSW
Trigger: CCACGACTGATTTGCCAGGTCTATGTCATATCCCCAAGACCATGTGGACTGAGAAAGTGGGGAAGGATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520186.1
CDS TCA 72 bp TCAGTAAGGTCCAACAAGCAAGAGACACACTCTGGTTaGAAGGAGCCCATCATTCAGTCAAGCATGTGGACC +
Preference number: 6 (lower is better)
Translates to: SVRSNKQETHSG*KEPIIQSSMWT
Trigger: GGTCCACATGCTTGACTGAATGATGGGCTCCTTTCAACCAGAGTGTGTCTCTTGCTTGTTGGACCTTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520186.1
CDS TCA 72 bp AAAGTTGAGCCAGTGAGCCCCAGGACTGTTCTGGAATaGCTGAGGGAAAGCATTGTCTTTGGGATCAGGTTT +
Preference number: 6 (lower is better)
Translates to: KVEPVSPRTVLE*LRESIVFGIRF
Trigger: AAACCTGATCCCAAAGACAATGCTTTCCCTCAGTCATTCCAGAACAGTCCTGGGGCTCACTGGCTCAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520186.1
CDS CAA 72 bp CTCAGTAAGGTCCAACAAGCAAGAGACACACTCTGGTaGAAAGGAGCCCATCATTCAGTCAAGCATGTGGAC +
Preference number: 6 (lower is better)
Translates to: LSKVQQARDTLW*KGAHHSVKHVD
Trigger: GTCCACATGCTTGACTGAATGATGGGCTCCTTTCAACCAGAGTGTGTCTCTTGCTTGTTGGACCTTACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520186.1