RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO38 (Homo sapiens)

Ensembl gene IDs: ENSG00000145868

Ensembl transcript IDs: ENST00000296701.10, ENST00000340253.10, ENST00000394370.7, ENST00000502571.1, ENST00000502629.1, ENST00000503613.5, ENST00000504447.1, ENST00000504971.1, ENST00000505399.2, ENST00000508176.1, ENST00000508326.5, ENST00000508485.2, ENST00000508670.1, ENST00000509273.6, ENST00000509411.5, ENST00000509699.6, ENST00000511080.5, ENST00000513826.1, ENST00000514832.1, ENST00000521160.5

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCAAACCGAGCCAGGACCTCCCAACTGCATGCCTCAAGTCCCTGTaGAGCACTCTGGCAGCTGGATGGCCCTACTTGCTTTCTGACAAA +
Preference number: 1 (lower is better)
Translates to: SKPSQDLPTACLKSL*STLAAGWPYLLSDK
Trigger: TTTGTCAGAAAGCAAGTAGGGCCATCCAGCTGCCAGAGTGCTCCACAGGGACTTGAGGCATGCAGTTGGGAGGTCCTGGCTCGGTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR CCA 90 bp CCAACTGCATGCCTCAAGTCCCTGTGGAGCACTCTGGCAGCTGGATaGCCCTACTTGCTTTCTGACAAAATAGCTGGAAAGGAGGAGGGA +
Preference number: 1 (lower is better)
Translates to: PTACLKSLWSTLAAG*PYLLSDKIAGKEEG
Trigger: TCCCTCCTCCTTTCCAGCTATTTTGTCAGAAAGCAAGTAGGGCCATCCAGCTGCCAGAGTGCTCCACAGGGACTTGAGGCATGCAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGCCCTGTGGAGCACTCTaGCAGCTGGATGGCCCTACT +
Preference number: 2 (lower is better)
Translates to: RCSLYIPYIANRARTSQLPCGAL*QLDGPT
Trigger: AGTAGGGCCATCCAGCTGCCAGAGTGCTCCACAGGG...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTGCCTCAAGTCCCTGTaGAGCACTCTGGCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: RCSLYIPYIANRARTSQLCLKSL*STLAAG
Trigger: TCCAGCTGCCAGAGTGCTCCACAGGGACTTGAGGCA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCCCCTGTGGAGCACTCTaGCAGCTGGATGGCCCTACT +
Preference number: 2 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLPCGAL*QLDGPT
Trigger: AGTAGGGCCATCCAGCTGCCAGAGTGCTCCACAGGG...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCATGCCTCAAGTCCCTGTaGAGCACTCTGGCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPCLKSL*STLAAG
Trigger: TCCAGCTGCCAGAGTGCTCCACAGGGACTTGAGGCA...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGAGCACTCTGGCAGCTaGATGGCCCTACTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPEHSGS*MALLAF
Trigger: GAAAGCAAGTAGGGCCATCCAGCTGCCAGAGTGCTC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTGCCTCAAGTCCCTGTaGAGCACTCTGGCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRCLKSL*STLAAG
Trigger: TCCAGCTGCCAGAGTGCTCCACAGGGACTTGAGGCA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCGAGCACTCTGGCAGCTaGATGGCCCTACTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLEHSGS*MALLAF
Trigger: GAAAGCAAGTAGGGCCATCCAGCTGCCAGAGTGCTC...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGACTCTGGCAGCTGGATaGCCCTACTTGCTTTCTGAC +
Preference number: 2 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRTLAAG*PYLLSD
Trigger: GTCAGAAAGCAAGTAGGGCCATCCAGCTGCCAGAGT...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCACTCTGGCAGCTGGATaGCCCTACTTGCTTTCTGAC +
Preference number: 2 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLTLAAG*PYLLSD
Trigger: GTCAGAAAGCAAGTAGGGCCATCCAGCTGCCAGAGT...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCCCCTGTGGAGCACTCTaGCAGCTGGATGGCCCTACT +
Preference number: 2 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAPCGAL*QLDGPT
Trigger: AGTAGGGCCATCCAGCTGCCAGAGTGCTCCACAGGG...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTGCCTCAAGTCCCTGTaGAGCACTCTGGCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: CIQFRCSLYIPYIANRARCLKSL*STLAAG
Trigger: TCCAGCTGCCAGAGTGCTCCACAGGGACTTGAGGCA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCGAGCACTCTGGCAGCTaGATGGCCCTACTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAEHSGS*MALLAF
Trigger: GAAAGCAAGTAGGGCCATCCAGCTGCCAGAGTGCTC...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR CCA 72 bp AGCCAGGACCTCCCAACTGCATGCCTCAAGTCCCTGTaGAGCACTCTGGCAGCTGGATGGCCCTACTTGCTT +
Preference number: 3 (lower is better)
Translates to: SQDLPTACLKSL*STLAAGWPYLL
Trigger: AAGCAAGTAGGGCCATCCAGCTGCCAGAGTGCTCCACAGGGACTTGAGGCATGCAGTTGGGAGGTCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CAA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGGCTGGATGGCCCTACTaGCTTTCTGACAAAATAGCT +
Preference number: 3 (lower is better)
Translates to: RCSLYIPYIANRARTSQLAGWPY*LSDKIA
Trigger: AGCTATTTTGTCAGAAAGCAAGTAGGGCCATCCAGC...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CAA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGCTGGATGGCCCTACTaGCTTTCTGACAAAATAGCT +
Preference number: 3 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPAGWPY*LSDKIA
Trigger: AGCTATTTTGTCAGAAAGCAAGTAGGGCCATCCAGC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CAA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGGCTGGATGGCCCTACTaGCTTTCTGACAAAATAGCT +
Preference number: 3 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRAGWPY*LSDKIA
Trigger: AGCTATTTTGTCAGAAAGCAAGTAGGGCCATCCAGC...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCGCTGGATGGCCCTACTaGCTTTCTGACAAAATAGCT +
Preference number: 3 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAAGWPY*LSDKIA
Trigger: AGCTATTTTGTCAGAAAGCAAGTAGGGCCATCCAGC...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
3UTR CAA 72 bp TCCCTGTGGAGCACTCTGGCAGCTGGATGGCCCTACTaGCTTTCTGACAAAATAGCTGGAAAGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SLWSTLAAGWPY*LSDKIAGKEEG
Trigger: TCCCTCCTCCTTTCCAGCTATTTTGTCAGAAAGCAAGTAGGGCCATCCAGCTGCCAGAGTGCTCCACAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCGGCCTCAGAGTCCTCTaGCCCACCGGGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLGLRVL*PTGGAG
Trigger: GCCTGCTCCCCCGGTGGGTCAGAGGACTCTGAGGCC...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR GCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTGGAGTTTCCCACTGTaGTGGCGGTGGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLWSFPL*WRWCCC
Trigger: GCAGCAGCACCACCGCCAGCACAGTGGGAAACTCCA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR TCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGGGCCTCAGAGTCCTCTaGCCCACCGGGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARGLRVL*PTGGAG
Trigger: GCCTGCTCCCCCGGTGGGTCAGAGGACTCTGAGGCC...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR TCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGACAGGCTCGGCTGGTTaGAGGACGTTCCTCATCAGA +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLTGSAG*RTFLIR
Trigger: TCTGATGAGGAACGTCCTTCAACCAGCCGAGCCTGT...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGCTCCGCCTGTTATTGTaGTTGAGAGGGAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLLRLLL*LRGRDA
Trigger: AGCGTCCCTCCCTCTCAACCACAATAACAGGCGGAG...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000340253.10
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAGGGACAGTCTGCTCCTaGCCCTGGTTAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRGTVCS*PWLGAS
Trigger: GGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTCCC...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGGATACCAGCAGTACATaGGACAGTCTGCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLDTSST*DSLLLA
Trigger: GGCCAGGAGCAGACTGTCCCATGTACTGCTGGTATC...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS-3UTR TCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTTGGGCGTAGGTATATaGTGCGGTTTCTCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLLGVGI*CGFSRV
Trigger: CACCCGAGAGAAACCGCATCATATACCTACGCCCAA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTTCCCACCACCGCCCTaGACAGAGATCTACAACTCT +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLFPPPP*TEIYNS
Trigger: AGAGTTGTAGATCTCTGTGCAGGGCGGTGGTGGGAA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTGCTGCTCTCCTGGCTaGAGATCTTGCCGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLCCSPG*RSCRKS
Trigger: TGACTTTCGGCAAGATCTGCAGCCAGGAGAGCAGCA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGGGGAGCAGGCACACTaGCTGGACACATCCACTTCT +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPGEQAH*LDTSTS
Trigger: AGAAGTGGATGTGTCCAGGCAGTGTGCCTGCTCCCC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGACTCTGGCAGCTGGATaGCCCTACTTGCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLTLAAG*PYLLSD
Trigger: GTCAGAAAGCAAGTAGGGCCATCCAGCTGCCAGAGT...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGGTCTGCTCCTGGCCCTaGTTAGGGGCCTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARVCSWP*LGASEG
Trigger: ACCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGAC...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS-3UTR TCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGCCTGTTATTGTGGTTaGGAGGGAGGGACGCTACAG +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPACYCG*EGGTLQ
Trigger: CTGTAGCGTCCCTCCCTCTCAACCACAATAACAGGC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000340253.10
CDS-3UTR TCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGGTCATTCTCCTCGTCTaGGTCATCTGGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLVILLV*VIWMMV
Trigger: CACCATCATCCAGATGACTCAGACGAGGAGAATGAC...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTTCGACTGGCCCATCTaGTGGGAGTTGTACCTCTTT +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLFDWPI*WELYLF
Trigger: AAAGAGGTACAACTCCCATCAGATGGGCCAGTCGAA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR GCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGGTGGCCCCATTGTTGTaGAGTCTCCAGTATCAACGA +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLVAPLL*SLQYQR
Trigger: TCGTTGATACTGGAGACTGCACAACAATGGGGCCAC...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCATGGCGGTGGTGCTGCTaGAGCTGGGATAAACATCCT +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPWRWCC*SWDKHP
Trigger: AGGATGTTTATCCCAGCTGCAGCAGCACCACCGCCA...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR GCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATGGAGTTTCCCACTGTaGTGGCGGTGGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRWSFPL*WRWCCC
Trigger: GCAGCAGCACCACCGCCAGCACAGTGGGAAACTCCA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR GCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGCAGACAGAACTCTCTaGATCTCCCTCCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPADRTL*ISLLHG
Trigger: GCCATGGAGGAGGGAGATGCAGAGAGTTCTGTCTGC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCACTCCGCCTGTTATTGTaGTTGAGAGGGAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPLRLLL*LRGRDA
Trigger: AGCGTCCCTCCCTCTCAACCACAATAACAGGCGGAG...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000340253.10
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGATGCTAAAAGCCTCATaGCCCCTTACTCTTCGCCTC +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLMLKAS*PLTLRL
Trigger: GAGGCGAAGAGTAAGGGGCCATGAGGCTTTTAGCAT...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGACCCTGTGGAGCACTCTaGCAGCTGGATGGCCCTACT +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRPCGAL*QLDGPT
Trigger: AGTAGGGCCATCCAGCTGCCAGAGTGCTCCACAGGG...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGGCCTGTTATTGTGGTTaGGAGGGAGGGACGCTACAG +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRACYCG*EGGTLQ
Trigger: CTGTAGCGTCCCTCCCTCTCAACCACAATAACAGGC...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000340253.10
CDS-3UTR TCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTCAAGGTATCGAGGGTaGAGGCCATATAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLSRYRG*RPYSCS
Trigger: TGAACAGCTATATGGCCTTCACCCTCGATACCTTGA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAGCGTCAGCTGCAAACTaGTGCTCTCCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRASAAN*CSPGCR
Trigger: TCTGCAGCCAGGAGAGCAGCAGTTTGCAGCTGACGC...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGATCCACAGGAATAATTaGCTGGCTGTGAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLIHRNN*LAVSWS
Trigger: ACTCCAGCTCACAGCCAGGCAATTATTCCTGTGGAT...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTGGCGGTGGTGCTGCTaGAGCTGGGATAAACATCCT +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRWRWCC*SWDKHP
Trigger: AGGATGTTTATCCCAGCTGCAGCAGCACCACCGCCA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR GCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAGGGGAGCAGGCACACTaGCTGGACACATCCACTTCT +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRGEQAH*LDTSTS
Trigger: AGAAGTGGATGTGTCCAGGCAGTGTGCCTGCTCCCC...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGCACACTTTTCTTTCGTaGCCCCATTGTTGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLHTFLS*PHCCAV
Trigger: GACTGCACAACAATGGGGCCACGAAAGAAAAGTGTG...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTGCCTGGCTGTGAGCTaGAGTATTATTTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLCLAVS*SIISTL
Trigger: GAGAGTGGAAATAATACTCCAGCTCACAGCCAGGCA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCACACGCTGAAGACCACTaGGTCCTGCTTGTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPHAEDH*VLLVPH
Trigger: ATGAGGAACAAGCAGGACCCAGTGGTCTTCAGCGTG...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGCTTCTGACAATTCTCTaGACTGCACTGACTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLLLTIL*TALTLQ
Trigger: CTGGAGAGTCAGTGCAGTCCAGAGAATTGTCAGAAG...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000513826.1
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTCTGGCAGCTGGATaGCCCTACTTGCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPTLAAG*PYLLSD
Trigger: GTCAGAAAGCAAGTAGGGCCATCCAGCTGCCAGAGT...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGGAGCACTCTGGCAGCTaGATGGCCCTACTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKREHSGS*MALLAF
Trigger: GAAAGCAAGTAGGGCCATCCAGCTGCCAGAGTGCTC...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATGCCTCAAGTCCCTGTaGAGCACTCTGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRCLKSL*STLAAG
Trigger: TCCAGCTGCCAGAGTGCTCCACAGGGACTTGAGGCA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCACAGTGTTGTGTGAGCTaGAGTTTCCCACTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPQCCVS*SFPLCW
Trigger: CCAGCACAGTGGGAAACTCCAGCTCACACAACACTG...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR TCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGGCACCGTACTAGGTTaGTATCAACCAATCGAGTCC +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPGTVLG*YQPIES
Trigger: GGACTCGATTGGTTGATATCAACCTAGTACGGTGCC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGTCATTCTCCTCGTCTaGGTCATCTGGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPVILLV*VIWMMV
Trigger: CACCATCATCCAGATGACTCAGACGAGGAGAATGAC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGATTGCCACTACTCGCTaGAATACACCCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLIATTR*NTPFFI
Trigger: GATGAAGAAGGGTGTATTTCAGCGAGTAGTGGCAAT...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAACAGGCTCGGCTGGTTaGAGGACGTTCCTCATCAGA +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRTGSAG*RTFLIR
Trigger: TCTGATGAGGAACGTCCTTCAACCAGCCGAGCCTGT...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR GCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCACCAATTCCTGTGCCTaGACTCAGACCAACTCGAGC +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLTNSCA*TQTNSS
Trigger: GCTCGAGTTGGTCTGAGTGCAGGCACAGGAATTGGT...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGACCAATTCCTGTGCCTaGACTCAGACCAACTCGAGC +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRTNSCA*TQTNSS
Trigger: GCTCGAGTTGGTCTGAGTGCAGGCACAGGAATTGGT...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCTGCTGCTCTCCTGGCTaGAGATCTTGCCGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLCCSPG*RSCRKS
Trigger: TGACTTTCGGCAAGATCTGCAGCCAGGAGAGCAGCA...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTGCTGCTCTCCTGGCTaGAGATCTTGCCGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRCCSPG*RSCRKS
Trigger: TGACTTTCGGCAAGATCTGCAGCCAGGAGAGCAGCA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGGCGTCAGCTGCAAACTaGTGCTCTCCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARASAAN*CSPGCR
Trigger: TCTGCAGCCAGGAGAGCAGCAGTTTGCAGCTGACGC...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGTTAGAGTGTCCACCTaGTGCATTGGGCGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPVRVST*CIGRRY
Trigger: ATACCTACGCCCAATGCAGCAGGTGGACACTCTAAC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTCCAGCTTCAAAGCATaGCACCGTACTAGGTTGATA +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLSSFKA*HRTRLI
Trigger: TATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGCTGCACCTGGTAGCATaGATGAACATCATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLLHLVA*MNIIFG
Trigger: TCCAAAGATGATGTTCATCCATGCTACCAGGTGCAG...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCATCGAGCGAAGCTGTTaGGCTCTGCAGCTCGTAATG +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLIERSC*ALQLVM
Trigger: CATTACGAGCTGCAGAGCCCAACAGCTTCGCTCGAT...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGCAGTGTTGTGTGAGCTaGAGTTTCCCACTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRQCCVS*SFPLCW
Trigger: CCAGCACAGTGGGAAACTCCAGCTCACACAACACTG...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCCAACACAGGCTCGGCTaGTTGAAGGACGTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLQHRLG*LKDVPH
Trigger: ATGAGGAACGTCCTTCAACCAGCCGAGCCTGTGTTG...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTCACAACTCTCAGGCTaGGAGCTCCCCCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRASQLSG*ELPLLS
Trigger: GGACAGGAGGGGGAGCTCCCAGCCTGAGAGTTGTGA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS-3UTR TCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCGTCATTCTCCTCGTCTaGGTCATCTGGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLVILLV*VIWMMV
Trigger: CACCATCATCCAGATGACTCAGACGAGGAGAATGAC...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGATAATTGCCTGGCTGTaGGCTGGAGTATTATTTCCA +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLIIAWL*AGVLFP
Trigger: TGGAAATAATACTCCAGCTCACAGCCAGGCAATTAT...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATTGGGCGTAGGTATATaGTGCGGTTTCTCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRLGVGI*CGFSRV
Trigger: CACCCGAGAGAAACCGCATCATATACCTACGCCCAA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTGCTCACTGGTGACCTaGCAGCCTTTCTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARCSLVT*QPFSQL
Trigger: CAGCTGTGAGAAAGGCTGTCAGGTCACCAGTGAGCA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR TCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAGAAGCAGTGTTGTGTaGGCTGGAGTTTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLRSSVV*AGVSHC
Trigger: ACAGTGGGAAACTCCAGCTCACACAACACTGCTTCT...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR GCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGGTGGCCCCATTGTTGTaGAGTCTCCAGTATCAACGA +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRVAPLL*SLQYQR
Trigger: TCGTTGATACTGGAGACTGCACAACAATGGGGCCAC...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAAAACACCAATTCCTGTaGCTGCACTCAGACCAACTC +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPKHQFL*LHSDQL
Trigger: GAGTTGGTCTGAGTGCAGGCACAGGAATTGGTGTTT...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATGCTGCTCTCCTGGCTaGAGATCTTGCCGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRCCSPG*RSCRKS
Trigger: TGACTTTCGGCAAGATCTGCAGCCAGGAGAGCAGCA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCGCGTCAGCTGCAAACTaGTGCTCTCCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAASAAN*CSPGCR
Trigger: TCTGCAGCCAGGAGAGCAGCAGTTTGCAGCTGACGC...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAATCCACAGGAATAATTaGCTGGCTGTGAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPIHRNN*LAVSWS
Trigger: ACTCCAGCTCACAGCCAGGCAATTATTCCTGTGGAT...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGACTAGTGGATTTATCTaGTGTCCGCTTCCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLTSGFI*CPLPFH
Trigger: ATGAAACGGAAGCGGACAGCAGATAAATCCACTAGT...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGGTTAGAGTGTCCACCTaGTGCATTGGGCGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRVRVST*CIGRRY
Trigger: ATACCTACGCCCAATGCAGCAGGTGGACACTCTAAC...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCGTTAGAGTGTCCACCTaGTGCATTGGGCGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLVRVST*CIGRRY
Trigger: ATACCTACGCCCAATGCAGCAGGTGGACACTCTAAC...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGACCATCCAGCTGCGAATaGGCACCTTATTCCGGACAT +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRPSSCE*APYSGH
Trigger: ATGTCCGGAATAAGGTGCGCATTCGCAGCTGGATGG...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCGTACATGGGACAGTCTaGTCCTGGCCCTGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAVHGTV*SWPWLG
Trigger: CCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTAC...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGATTTCAAGGAATTTGTaGGTCCTGCACAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLISRNL*VLHSSS
Trigger: TGAGGAACTGTGCAGGACCCACAAATTCCTTGAAAT...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGCGAGTCCATCTTGAGTaGTCTGAGATCCAATTGTAT +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLRVHLE*SEIQLY
Trigger: ATACAATTGGATCTCAGACCACTCAAGATGGACTCG...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAAGCACAACCCTTGGGTaGTTCACGAAACATCTGATC +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPSTTLG*FTKHLI
Trigger: GATCAGATGTTTCGTGAACCACCCAAGGGTTGTGCT...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGCTCGAGCACAACCCTTaGGTGGTTCACGAAACATCT +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRLEHNP*VVHETS
Trigger: AGATGTTTCGTGAACCACCCAAGGGTTGTGCTCGAG...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCCTCGAGCACAACCCTTaGGTGGTTCACGAAACATCT +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLLEHNP*VVHETS
Trigger: AGATGTTTCGTGAACCACCCAAGGGTTGTGCTCGAG...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGACACGCTGAAGACCACTaGGTCCTGCTTGTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRHAEDH*VLLVPH
Trigger: ATGAGGAACAAGCAGGACCCAGTGGTCTTCAGCGTG...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGGACGTGGCTTTGTTTTaGCTACTTCTGACAATTCTC +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLDVALF*LLLTIL
Trigger: GAGAATTGTCAGAAGTAGCCAAAACAAAGCCACGTC...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCTCCGCTTCCGTTTCATaGCGTGACGTGGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLSASVS*RDVALF
Trigger: AAACAAAGCCACGTCACGCCATGAAACGGAAGCGGA...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACAAGAACCTGCACATaGTCATCCTCGATCACAGGA +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPTRTCT*SSSITG
Trigger: TCCTGTGATCGAGGATGACCATGTGCAGGTTCTTGT...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGGTAGTCATCTTCAACTaGCTCTCCATTGACATCACA +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLVVIFN*LSIDIT
Trigger: TGTGATGTCAATGGAGAGCCAGTTGAAGATGACTAC...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCTCAAGGTATCGAGGGTaGAGGCCATATAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLSRYRG*RPYSCS
Trigger: TGAACAGCTATATGGCCTTCACCCTCGATACCTTGA...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCATCTACCAACTCCAAATaGGAAGTTTCCACACCCACT +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPSTNSK*EVSTPT
Trigger: AGTGGGTGTGGAAACTTCTCATTTGGAGTTGGTAGA...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAGGCACCGTACTAGGTTaGTATCAACCAATCGAGTCC +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRGTVLG*YQPIES
Trigger: GGACTCGATTGGTTGATATCAACCTAGTACGGTGCC...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTTGGGCGTAGGTATATaGTGCGGTTTCTCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARLGVGI*CGFSRV
Trigger: CACCCGAGAGAAACCGCATCATATACCTACGCCCAA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGGCCTTTTCCACTTACTaGCAATTCTCTGGACTGCAC +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRAFSTY*QFSGLH
Trigger: GTGCAGTCCAGAGAATTGTCAGTAAGTGGAAAAGGC...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR TCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTGCTCACTGGTGACCTaGCAGCCTTTCTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRACSLVT*QPFSQL
Trigger: CAGCTGTGAGAAAGGCTGTCAGGTCACCAGTGAGCA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR TCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAACAAAGTCGGGGCTTTaGGAAGCAGTGTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRTKSGL*EAVLCE
Trigger: CTCACACAACACTGCTTCTCAAAGCCCCGACTTTGT...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR GCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAGTGGCCCCATTGTTGTaGAGTCTCCAGTATCAACGA +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRVAPLL*SLQYQR
Trigger: TCGTTGATACTGGAGACTGCACAACAATGGGGCCAC...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCAATTCCTGTGCCTaGACTCAGACCAACTCGAGC +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARTNSCA*TQTNSS
Trigger: GCTCGAGTTGGTCTGAGTGCAGGCACAGGAATTGGT...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGATCCACAGGAATAATTaGCTGGCTGTGAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRIHRNN*LAVSWS
Trigger: ACTCCAGCTCACAGCCAGGCAATTATTCCTGTGGAT...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCATCCACAGGAATAATTaGCTGGCTGTGAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLIHRNN*LAVSWS
Trigger: ACTCCAGCTCACAGCCAGGCAATTATTCCTGTGGAT...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGCAGTTTCTTGCACTGTaGATAGTCAAATCGGTTTAC +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLQFLAL*IVKSVY
Trigger: GTAAACCGATTTGACTATGCACAGTGCAAGAAACTG...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGCCATGTTCAGTTTCTTaGACTGTGCATAGTCAAATC +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLPCSVS*TVHSQI
Trigger: GATTTGACTATGCACAGTGCAAGAAACTGAACATGG...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGCCATCCAGCTGCGAATaGGCACCTTATTCCGGACAT +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARPSSCE*APYSGH
Trigger: ATGTCCGGAATAAGGTGCGCATTCGCAGCTGGATGG...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAGCCTTTCTCACAGCTaGTTTCCTCGAGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRSLSHS*FPRGET
Trigger: AGTTTCCCCTCGAGGAAAGCAGCTGTGAGAAAGGCT...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR GCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTGCTGGCGGTGGTGCTaGTGCAGCTGGGATAAACAT +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRACWRWC*CSWDKH
Trigger: ATGTTTATCCCAGCTGCAGCAGCACCACCGCCAGCA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR GCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCGCAGACAGAACTCTCTaGATCTCCCTCCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAADRTL*ISLLHG
Trigger: GCCATGGAGGAGGGAGATGCAGAGAGTTCTGTCTGC...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGCACACTTTTCTTTCGTaGCCCCATTGTTGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRHTFLS*PHCCAV
Trigger: GACTGCACAACAATGGGGCCACGAAAGAAAAGTGTG...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCATCCAGCTTCAAAGCATaGCACCGTACTAGGTTGATA +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPSSFKA*HRTRLI
Trigger: TATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGA...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGAGCACAACCCTTGGGTaGTTCACGAAACATCTGATC +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRSTTLG*FTKHLI
Trigger: GATCAGATGTTTCGTGAACCACCCAAGGGTTGTGCT...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTCATTGTTGGAGTTCTaGTTGCTAACAAGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLSLLEF*LLTRAD
Trigger: ATCAGCTCTTGTTAGCAACCAGAACTCCAACAATGA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGCACGCTGAAGACCACTaGGTCCTGCTTGTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARHAEDH*VLLVPH
Trigger: ATGAGGAACAAGCAGGACCCAGTGGTCTTCAGCGTG...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCATTTCATGGCGTGACGTaGCTTTGTTTTGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPFHGVT*LCFGYF
Trigger: GAAGTAGCCAAAACAAAGCCACGTCACGCCATGAAA...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATCCGCTTCCGTTTCATaGCGTGACGTGGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRSASVS*RDVALF
Trigger: AAACAAAGCCACGTCACGCCATGAAACGGAAGCGGA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCATCCCCCAGGGGTACTTaGGGTATTTCTTTAAGTCTT +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPSPRGT*GISLSL
Trigger: AAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGA...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGATCGAGCGAAGCTGTTaGGCTCTGCAGCTCGTAATG +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARIERSC*ALQLVM
Trigger: CATTACGAGCTGCAGAGCCCAACAGCTTCGCTCGAT...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCATCCCTTTTGTTTACTTaGGTTCAAAGTACCTACGCC +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPSLLFT*VQSTYA
Trigger: GGCGTAGGTACTTTGAACTCAAGTAAACAAAAGGGA...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
CDS-3UTR TCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCTCTACCAACTCCAAATaGGAAGTTTCCACACCCACT +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLSTNSK*EVSTPT
Trigger: AGTGGGTGTGGAAACTTCTCATTTGGAGTTGGTAGA...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTTGGGCGTAGGTATATaGTGCGGTTTCTCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRALGVGI*CGFSRV
Trigger: CACCCGAGAGAAACCGCATCATATACCTACGCCCAA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCACATCTGACGCATCTCTaGAATTTCCTCTCCTATTGT +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPHLTHL*NFLSYC
Trigger: ACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATG...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGACACCCTTCTTCATCTaGCGCATCTCTGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRTPFFI*RISEIS
Trigger: GGAAATTTCAGAGATGCGTCAGATGAAGAAGGGTGT...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGATTGCCACTACTCGCTaGAATACACCCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRIATTR*NTPFFI
Trigger: GATGAAGAAGGGTGTATTTCAGCGAGTAGTGGCAAT...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCATTGCCACTACTCGCTaGAATACACCCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLIATTR*NTPFFI
Trigger: GATGAAGAAGGGTGTATTTCAGCGAGTAGTGGCAAT...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGAGAAGCAGTGTTGTGTaGGCTGGAGTTTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARRSSVV*AGVSHC
Trigger: ACAGTGGGAAACTCCAGCTCACACAACACTGCTTCT...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR TCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTGTTTTGGCTACTTCTaGCTCAGATACCAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRCFGYF*LRYQQY
Trigger: GTACTGCTGGTATCTGAGTCAGAAGTAGCCAAAACA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS-3UTR GCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCACCAATTCCTGTGCCTaGACTCAGACCAACTCGAGC +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRATNSCA*TQTNSS
Trigger: GCTCGAGTTGGTCTGAGTGCAGGCACAGGAATTGGT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAACACCAATTCCTGTaGCTGCACTCAGACCAACTC +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRKHQFL*LHSDQL
Trigger: GAGTTGGTCTGAGTGCAGGCACAGGAATTGGTGTTT...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAGACCACTGGGTCCTaGTTGTTCCTCATCAACATC +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRKTTGS*LFLINI
Trigger: GATGTTGATGAGGAACAAGCAGGACCCAGTGGTCTT...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTAGTGGATTTATCTaGTGTCCGCTTCCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPTSGFI*CPLPFH
Trigger: ATGAAACGGAAGCGGACAGCAGATAAATCCACTAGT...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCACCACTAAATAGCTTCTaGTCCAAAGTTAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPPLNSF*SKVRVS
Trigger: GGACACTCTAACTTTGGAGCAGAAGCTATTTAGTGG...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCCCATCCAGCTGCGAATaGGCACCTTATTCCGGACAT +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAPSSCE*APYSGH
Trigger: ATGTCCGGAATAAGGTGCGCATTCGCAGCTGGATGG...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCTTCCATACAGATGTCTaGAGACAGCTGTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLFHTDV*RQLSFP
Trigger: AGGAAAGGACAGCTGTCTGCAGACATCTGTATGGAA...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGAAGGAAGTCTTTAAATaGCTGTGGTTTAGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLKEVFK*LWFSES
Trigger: AGACTCACTAAACCACAGCCATTTAAAGACTTCCTT...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTCTTCAACAACATGTTaGATAAGACCTCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLSSTTC*IRPPRK
Trigger: TTTCCTTGGAGGTCTTATCCAACATGTTGTTGAAGA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCACGAGTCCATCTTGAGTaGTCTGAGATCCAATTGTAT +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPRVHLE*SEIQLY
Trigger: ATACAATTGGATCTCAGACCACTCAAGATGGACTCG...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCTCCAGCTTCAAAGCATaGCACCGTACTAGGTTGATA +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLSSFKA*HRTRLI
Trigger: TATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGA...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATGCCTGGCTGTGAGCTaGAGTATTATTTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRCLAVS*SIISTL
Trigger: GAGAGTGGAAATAATACTCCAGCTCACAGCCAGGCA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCCACGCTGAAGACCACTaGGTCCTGCTTGTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAHAEDH*VLLVPH
Trigger: ATGAGGAACAAGCAGGACCCAGTGGTCTTCAGCGTG...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGACGTGGCTTTGTTTTaGCTACTTCTGACAATTCTC +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPDVALF*LLLTIL
Trigger: GAGAATTGTCAGAAGTAGCCAAAACAAAGCCACGTC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000513826.1
CDS-3UTR CCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTCCGCTTCCGTTTCATaGCGTGACGTGGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARSASVS*RDVALF
Trigger: AAACAAAGCCACGTCACGCCATGAAACGGAAGCGGA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCCTGCACCTGGTAGCATaGATGAACATCATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLLHLVA*MNIIFG
Trigger: TCCAAAGATGATGTTCATCCATGCTACCAGGTGCAG...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGCTGCACCTGGTAGCATaGATGAACATCATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRLHLVA*MNIIFG
Trigger: TCCAAAGATGATGTTCATCCATGCTACCAGGTGCAG...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTCCCCCAGGGGTACTTaGGGTATTTCTTTAAGTCTT +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRSPRGT*GISLSL
Trigger: AAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGGAAGTCAGAAATCATaGAATATGGAGCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPGSQKS*NMELHP
Trigger: TGGATGGAGCTCCATATTCCATGATTTCTGACTTCC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCACTCTGGCAGCTGGATaGCCCTACTTGCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRATLAAG*PYLLSD
Trigger: GTCAGAAAGCAAGTAGGGCCATCCAGCTGCCAGAGT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCGTACCTCTTTCGAAGTaGAGTCTTGCCTTTTCCACT +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLVPLSK*SLAFST
Trigger: AGTGGAAAAGGCAAGACTCCACTTCGAAAGAGGTAC...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR TCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTCCCTTTTGTTTACTTaGGTTCAAAGTACCTACGCC +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRSLLFT*VQSTYA
Trigger: GGCGTAGGTACTTTGAACTCAAGTAAACAAAAGGGA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
CDS-3UTR TCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAATTTCTAAAACCACCTaGTCTCCAACTGTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPISKTT*SPTVFN
Trigger: GTTGAAGACAGTTGGAGATCAGGTGGTTTTAGAAAT...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCGGCACCGTACTAGGTTaGTATCAACCAATCGAGTCC +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAGTVLG*YQPIES
Trigger: GGACTCGATTGGTTGATATCAACCTAGTACGGTGCC...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGGTTCACGAAACATCTaGTCCAGTGAAATAAACTCT +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPGSRNI*SSEINS
Trigger: AGAGTTTATTTCACTGGATCAGATGTTTCGTGAACC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCGTCATTCTCCTCGTCTaGGTCATCTGGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAVILLV*VIWMMV
Trigger: CACCATCATCCAGATGACTCAGACGAGGAGAATGAC...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGATAATTGCCTGGCTGTaGGCTGGAGTATTATTTCCA +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRIIAWL*AGVLFP
Trigger: TGGAAATAATACTCCAGCTCACAGCCAGGCAATTAT...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATGTTTTGGCTACTTCTaGCAATTCTCTGGACTGCAC +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRCFGYF*QFSGLH
Trigger: GTGCAGTCCAGAGAATTGTCAGAAGTAGCCAAAACA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000513826.1
CDS-3UTR TCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCATCTGGTCTAGTACCTaGTCCATGTTCAGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLIWSST*SMFSFL
Trigger: CAAGAAACTGAACATGGATCAGGTACTAGACCAGAT...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGATCTGGTCTAGTACCTaGTCCATGTTCAGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRIWSST*SMFSFL
Trigger: CAAGAAACTGAACATGGATCAGGTACTAGACCAGAT...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCCATCTGACGCATCTCTaGAATTTCCTCTCCTATTGT +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLHLTHL*NFLSYC
Trigger: ACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATG...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTTCGACTGGCCCATCTaGTGGGAGTTGTACCTCTTT +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAFDWPI*WELYLF
Trigger: AAAGAGGTACAACTCCCATCAGATGGGCCAGTCGAA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR TCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCACAAAGTCGGGGCTTTaGGAAGCAGTGTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRATKSGL*EAVLCE
Trigger: CTCACACAACACTGCTTCTCAAAGCCCCGACTTTGT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR GCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCGTGGCCCCATTGTTGTaGAGTCTCCAGTATCAACGA +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAVAPLL*SLQYQR
Trigger: TCGTTGATACTGGAGACTGCACAACAATGGGGCCAC...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGAAACACCAATTCCTGTaGCTGCACTCAGACCAACTC +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARKHQFL*LHSDQL
Trigger: GAGTTGGTCTGAGTGCAGGCACAGGAATTGGTGTTT...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCACAGTTTCTTGCACTGTaGATAGTCAAATCGGTTTAC +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPQFLAL*IVKSVY
Trigger: GTAAACCGATTTGACTATGCACAGTGCAAGAAACTG...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCACCATGTTCAGTTTCTTaGACTGTGCATAGTCAAATC +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPPCSVS*TVHSQI
Trigger: GATTTGACTATGCACAGTGCAAGAAACTGAACATGG...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGCCACTAAATAGCTTCTaGTCCAAAGTTAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRPLNSF*SKVRVS
Trigger: GGACACTCTAACTTTGGAGCAGAAGCTATTTAGTGG...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCCCACTAAATAGCTTCTaGTCCAAAGTTAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLPLNSF*SKVRVS
Trigger: GGACACTCTAACTTTGGAGCAGAAGCTATTTAGTGG...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATTCCATACAGATGTCTaGAGACAGCTGTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRFHTDV*RQLSFP
Trigger: AGGAAAGGACAGCTGTCTGCAGACATCTGTATGGAA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGATAGTGGATAAAAATTaGCACTACTCGCTGAAATAC +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLIVDKN*HYSLKY
Trigger: GTATTTCAGCGAGTAGTGGCAATTTTTATCCACTAT...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTTCGAAGTGGAGTCTTaGCTTTTCCACTTACTGACA +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRFEVES*LFHLLT
Trigger: TGTCAGTAAGTGGAAAAGGCAAGACTCCACTTCGAA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR GCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGCCTTTCTCACAGCTaGTTTCCTCGAGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRASLSHS*FPRGET
Trigger: AGTTTCCCCTCGAGGAAAGCAGCTGTGAGAAAGGCT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CCA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGGCATATATGTCCAAATaGATTCTACCAACTCCAAAT +
Preference number: 4 (lower is better)
Translates to: RCSLYIPYIANRARTSQLAYMSK*ILPTPN
Trigger: ATTTGGAGTTGGTAGAATCCATTTGGACATATATGC...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGTCTTTAAATGGCTGTaGTTTAGTGAGTCTTACCCA +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPVFKWL*FSESYP
Trigger: TGGGTAAGACTCACTAAACCACAGCCATTTAAAGAC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGCGAGTCCATCTTGAGTaGTCTGAGATCCAATTGTAT +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRRVHLE*SEIQLY
Trigger: ATACAATTGGATCTCAGACCACTCAAGATGGACTCG...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCCTCGAGCACAACCCTTaGGTGGTTCACGAAACATCT +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRALEHNP*VVHETS
Trigger: AGATGTTTCGTGAACCACCCAAGGGTTGTGCTCGAG...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGCTTCTGACAATTCTCTaGACTGCACTGACTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARLLTIL*TALTLQ
Trigger: CTGGAGAGTCAGTGCAGTCCAGAGAATTGTCAGAAG...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATTTCATGGCGTGACGTaGCTTTGTTTTGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRFHGVT*LCFGYF
Trigger: GAAGTAGCCAAAACAAAGCCACGTCACGCCATGAAA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAGAAATCATGGAATATaGAGCTCCATCCACAACACC +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLRNHGI*SSIHNT
Trigger: GGTGTTGTGGATGGAGCTCCATATTCCATGATTTCT...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCGGAAGTCAGAAATCATaGAATATGGAGCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLGSQKS*NMELHP
Trigger: TGGATGGAGCTCCATATTCCATGATTTCTGACTTCC...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCGTAGTCATCTTCAACTaGCTCTCCATTGACATCACA +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLVVIFN*LSIDIT
Trigger: TGTGATGTCAATGGAGAGCCAGTTGAAGATGACTAC...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGGTAGTCATCTTCAACTaGCTCTCCATTGACATCACA +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRVVIFN*LSIDIT
Trigger: TGTGATGTCAATGGAGAGCCAGTTGAAGATGACTAC...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAGTACCTCTTTCGAAGTaGAGTCTTGCCTTTTCCACT +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRVPLSK*SLAFST
Trigger: AGTGGAAAAGGCAAGACTCCACTTCGAAAGAGGTAC...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATGGTGCTGCTGCAGCTaGGATAAACATCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRWCCCS*DKHPCF
Trigger: AAAACAAGGATGTTTATCCCAGCTGCAGCAGCACCA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCGACGTGGCTTTGTTTTaGCTACTTCATCCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRADVALF*LLHPGH
Trigger: ATGGCCCGGATGAAGTAGCCAAAACAAAGCCACGTC...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394370.7
CDS-3UTR TCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTCAAGGTATCGAGGGTaGAGGCCATATAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRASRYRG*RPYSCS
Trigger: TGAACAGCTATATGGCCTTCACCCTCGATACCTTGA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGATTTCTAAAACCACCTaGTCTCCAACTGTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRISKTT*SPTVFN
Trigger: GTTGAAGACAGTTGGAGATCAGGTGGTTTTAGAAAT...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGGGTTCACGAAACATCTaGTCCAGTGAAATAAACTCT +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRGSRNI*SSEINS
Trigger: AGAGTTTATTTCACTGGATCAGATGTTTCGTGAACC...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAATAATTGCCTGGCTGTaGGCTGGAGTATTATTTCCA +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRIIAWL*AGVLFP
Trigger: TGGAAATAATACTCCAGCTCACAGCCAGGCAATTAT...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACACCCTTCTTCATCTaGCGCATCTCTGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARTPFFI*RISEIS
Trigger: GGAAATTTCAGAGATGCGTCAGATGAAGAAGGGTGT...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGATTGCCACTACTCGCTaGAATACACCCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARIATTR*NTPFFI
Trigger: GATGAAGAAGGGTGTATTTCAGCGAGTAGTGGCAAT...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAAACACCAATTCCTGTaGCTGCACTCAGACCAACTC +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAKHQFL*LHSDQL
Trigger: GAGTTGGTCTGAGTGCAGGCACAGGAATTGGTGTTT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAAGACCACTGGGTCCTaGTTGTTCCTCATCAACATC +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAKTTGS*LFLINI
Trigger: GATGTTGATGAGGAACAAGCAGGACCCAGTGGTCTT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTTTAATACAAGAACCTaGACATGGTCATCCTCGATC +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRFNTRT*TWSSSI
Trigger: GATCGAGGATGACCATGTGCAGGTTCTTGTATTAAA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGCAGTTTCTTGCACTGTaGATAGTCAAATCGGTTTAC +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRQFLAL*IVKSVY
Trigger: GTAAACCGATTTGACTATGCACAGTGCAAGAAACTG...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTTCCATACAGATGTCTaGAGACAGCTGTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARFHTDV*RQLSFP
Trigger: AGGAAAGGACAGCTGTCTGCAGACATCTGTATGGAA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGGTCTTTAAATGGCTGTaGTTTAGTGAGTCTTACCCA +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRVFKWL*FSESYP
Trigger: TGGGTAAGACTCACTAAACCACAGCCATTTAAAGAC...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAATTTCAAGGAATTTGTaGGTCCTGCACAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRISRNL*VLHSSS
Trigger: TGAGGAACTGTGCAGGACCCACAAATTCCTTGAAAT...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGACGAGTCCATCTTGAGTaGTCTGAGATCCAATTGTAT +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRRVHLE*SEIQLY
Trigger: ATACAATTGGATCTCAGACCACTCAAGATGGACTCG...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGCACAACCCTTGGGTaGTTCACGAAACATCTGATC +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRASTTLG*FTKHLI
Trigger: GATCAGATGTTTCGTGAACCACCCAAGGGTTGTGCT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCTCATTGTTGGAGTTCTaGTTGCTAACAAGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLSLLEF*LLTRAD
Trigger: ATCAGCTCTTGTTAGCAACCAGAACTCCAACAATGA...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTGCCTGGCTGTGAGCTaGAGTATTATTTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRACLAVS*SIISTL
Trigger: GAGAGTGGAAATAATACTCCAGCTCACAGCCAGGCA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCACAAGAACCTGCACATaGTCATCCTCGATCACAGGA +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRATRTCT*SSSITG
Trigger: TCCTGTGATCGAGGATGACCATGTGCAGGTTCTTGT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTCCCCCAGGGGTACTTaGGGTATTTCTTTAAGTCTT +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARSPRGT*GISLSL
Trigger: AAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAGTAGTCATCTTCAACTaGCTCTCCATTGACATCACA +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRVVIFN*LSIDIT
Trigger: TGTGATGTCAATGGAGAGCCAGTTGAAGATGACTAC...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTCCCTTTTGTTTACTTaGGTTCAAAGTACCTACGCC +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARSLLFT*VQSTYA
Trigger: GGCGTAGGTACTTTGAACTCAAGTAAACAAAAGGGA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
CDS-3UTR TCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGATCTGGTCTAGTACCTaGTCCATGTTCAGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARIWSST*SMFSFL
Trigger: CAAGAAACTGAACATGGATCAGGTACTAGACCAGAT...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGCATCTGACGCATCTCTaGAATTTCCTCTCCTATTGT +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARHLTHL*NFLSYC
Trigger: ACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATG...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATTTAATACAAGAACCTaGACATGGTCATCCTCGATC +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRFNTRT*TWSSSI
Trigger: GATCGAGGATGACCATGTGCAGGTTCTTGTATTAAA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGACAGTTTCTTGCACTGTaGATAGTCAAATCGGTTTAC +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRQFLAL*IVKSVY
Trigger: GTAAACCGATTTGACTATGCACAGTGCAAGAAACTG...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGCCACTAAATAGCTTCTaGTCCAAAGTTAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARPLNSF*SKVRVS
Trigger: GGACACTCTAACTTTGGAGCAGAAGCTATTTAGTGG...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTTCGAAGTGGAGTCTTaGCTTTTCCACTTACTGACA +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARFEVES*LFHLLT
Trigger: TGTCAGTAAGTGGAAAAGGCAAGACTCCACTTCGAA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CCA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGCATATATGTCCAAATaGATTCTACCAACTCCAAAT +
Preference number: 4 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPAYMSK*ILPTPN
Trigger: ATTTGGAGTTGGTAGAATCCATTTGGACATATATGC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAGTCTTTAAATGGCTGTaGTTTAGTGAGTCTTACCCA +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRVFKWL*FSESYP
Trigger: TGGGTAAGACTCACTAAACCACAGCCATTTAAAGAC...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGAAGGAAGTCTTTAAATaGCTGTGGTTTAGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRKEVFK*LWFSES
Trigger: AGACTCACTAAACCACAGCCATTTAAAGACTTCCTT...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTCCAGCTTCAAAGCATaGCACCGTACTAGGTTGATA +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRASSFKA*HRTRLI
Trigger: TATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATCATTGTTGGAGTTCTaGTTGCTAACAAGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRSLLEF*LLTRAD
Trigger: ATCAGCTCTTGTTAGCAACCAGAACTCCAACAATGA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTTTCATGGCGTGACGTaGCTTTGTTTTGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAFHGVT*LCFGYF
Trigger: GAAGTAGCCAAAACAAAGCCACGTCACGCCATGAAA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCCTGCACCTGGTAGCATaGATGAACATCATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRALHLVA*MNIIFG
Trigger: TCCAAAGATGATGTTCATCCATGCTACCAGGTGCAG...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGAGAAATCATGGAATATaGAGCTCCATCCACAACACC +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARRNHGI*SSIHNT
Trigger: GGTGTTGTGGATGGAGCTCCATATTCCATGATTTCT...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTGGTGCTGCTGCAGCTaGGATAAACATCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAWCCCS*DKHPCF
Trigger: AAAACAAGGATGTTTATCCCAGCTGCAGCAGCACCA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR TCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCATAATTGCCTGGCTGTaGGCTGGAGTATTATTTCCA +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAIIAWL*AGVLFP
Trigger: TGGAAATAATACTCCAGCTCACAGCCAGGCAATTAT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR TCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCCATCTGACGCATCTCTaGAATTTCCTCTCCTATTGT +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAHLTHL*NFLSYC
Trigger: ACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATG...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCACTAGTGGATTTATCTaGTGTCCGCTTCCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRATSGFI*CPLPFH
Trigger: ATGAAACGGAAGCGGACAGCAGATAAATCCACTAGT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCGCATATATGTCCAAATaGATTCTACCAACTCCAAAT +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLAYMSK*ILPTPN
Trigger: ATTTGGAGTTGGTAGAATCCATTTGGACATATATGC...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGATTTTCAGGAGGAATTaGAAAAGCTCCATTACGATT +
Preference number: 4 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRIFRRN*KSSITI
Trigger: AATCGTAATGGAGCTTTTCCAATTCCTCCTGAAAAT...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCATTTTCAGGAGGAATTaGAAAAGCTCCATTACGATT +
Preference number: 4 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLIFRRN*KSSITI
Trigger: AATCGTAATGGAGCTTTTCCAATTCCTCCTGAAAAT...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCATTTCAAGGAATTTGTaGGTCCTGCACAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAISRNL*VLHSSS
Trigger: TGAGGAACTGTGCAGGACCCACAAATTCCTTGAAAT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATCTTCAACAACATGTTaGATAAGACCTCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRSSTTC*IRPPRK
Trigger: TTTCCTTGGAGGTCTTATCCAACATGTTGTTGAAGA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCGGAAGTCAGAAATCATaGAATATGGAGCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAGSQKS*NMELHP
Trigger: TGGATGGAGCTCCATATTCCATGATTTCTGACTTCC...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCGACGTGGCTTTGTTTTaGCTACTTCTGACTCAGATA +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRADVALF*LLLTQI
Trigger: TATCTGAGTCAGAAGTAGCCAAAACAAAGCCACGTC...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS-3UTR GCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCCCATGTTCAGTTTCTTaGACTGTGCATAGTCAAATC +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAPCSVS*TVHSQI
Trigger: GATTTGACTATGCACAGTGCAAGAAACTGAACATGG...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAATAGTGGATAAAAATTaGCACTACTCGCTGAAATAC +
Preference number: 4 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRIVDKN*HYSLKY
Trigger: GTATTTCAGCGAGTAGTGGCAATTTTTATCCACTAT...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGAATATCCCTAGCTaGTTTCATATCGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRARNIPS*FHIGFD
Trigger: ATCAAAGCCGATATGAAAGCAGCTAGGGATATTCCT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGAAGGAAGTCTTTAAATaGCTGTGGTTTAGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARKEVFK*LWFSES
Trigger: AGACTCACTAAACCACAGCCATTTAAAGACTTCCTT...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTCTTCAACAACATGTTaGATAAGACCTCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARSSTTC*IRPPRK
Trigger: TTTCCTTGGAGGTCTTATCCAACATGTTGTTGAAGA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR GCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGATAGTGGATAAAAATTaGCACTACTCGCTGAAATAC +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARIVDKN*HYSLKY
Trigger: GTATTTCAGCGAGTAGTGGCAATTTTTATCCACTAT...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGATTTTCAGGAGGAATTaGAAAAGCTCCATTACGATT +
Preference number: 4 (lower is better)
Translates to: CIQFRCSLYIPYIANRARIFRRN*KSSITI
Trigger: AATCGTAATGGAGCTTTTCCAATTCCTCCTGAAAAT...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTCTTCAACAACATGTTaGATAAGACCTCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRASSTTC*IRPPRK
Trigger: TTTCCTTGGAGGTCTTATCCAACATGTTGTTGAAGA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CCA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCATTTTCAGGAGGAATTaGAAAAGCTCCATTACGATT +
Preference number: 4 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAIFRRN*KSSITI
Trigger: AATCGTAATGGAGCTTTTCCAATTCCTCCTGAAAAT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS CCA 90 bp AGCAGCATCTGGGGCAGACAGAACTCTCTGCATCTCCCTCCTCCATaGCCTCAGAGTCCTCTGACCCACCGGGGGAGCAGGCACACTGCC +
Preference number: 5 (lower is better)
Translates to: SSIWGRQNSLHLPPP*PQSPLTHRGSRHTA
Trigger: GGCAGTGTGCCTGCTCCCCCGGTGGGTCAGAGGACTCTGAGGCCATGGAGGAGGGAGATGCAGAGAGTTCTGTCTGCCCCAGATGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS TCA 90 bp TTGAGTTCAAAGTACCTACGCCGACCCTCCGCCTGTTATTGTGGTTaGGAGGGAGGGACGCTACAGACACTTCCCCGGCCCCTACCGCTG +
Preference number: 5 (lower is better)
Translates to: LSSKYLRRPSACYCG*EGGTLQTLPRPLPL
Trigger: CAGCGGTAGGGGCCGGGGAAGTGTCTGTAGCGTCCCTCCCTCTCAACCACAATAACAGGCGGAGGGTCGGCGTAGGTACTTTGAACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000503613.5
CDS TCA 90 bp TCGGAAGAGCCGCCGCTGTTCACCGTCCTTACAAAGTCGGGGCTTTaGGAAGCAGTGTTGTGTGAGCTGGAGTTTCCCACTGTGCTGGCG +
Preference number: 5 (lower is better)
Translates to: SEEPPLFTVLTKSGL*EAVLCELEFPTVLA
Trigger: CGCCAGCACAGTGGGAAACTCCAGCTCACACAACACTGCTTCTCAAAGCCCCGACTTTGTAAGGACGGTGAACAGCGGCGGCTCTTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS TCA 90 bp GTTCACCGTCCTTACAAAGTCGGGGCTTTGAGAAGCAGTGTTGTGTaGGCTGGAGTTTCCCACTGTGCTGGCGGTGGTGCTGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: VHRPYKVGALRSSVV*AGVSHCAGGGAAAA
Trigger: AGCTGCAGCAGCACCACCGCCAGCACAGTGGGAAACTCCAGCTCACACAACACTGCTTCTCAAAGCCCCGACTTTGTAAGGACGGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS TCA 90 bp GGATCTCGTACCATCCGGGCCATTCACAACACAGGCTCGGCTGGTTaGAGGACGTTCCTCATCAGAACACCTGCTAGTTCTCCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: GSRTIRAIHNTGSAG*RTFLIRTPASSPLG
Trigger: TCCCAAAGGAGAACTAGCAGGTGTTCTGATGAGGAACGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCCCGGATGGTACGAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS GCA 90 bp CGGGGCTTTGAGAAGCAGTGTTGTGTGAGCTGGAGTTTCCCACTGTaGTGGCGGTGGTGCTGCTGCAGCTGGGATAAACATCCTTGTTTT +
Preference number: 5 (lower is better)
Translates to: RGFEKQCCVSWSFPL*WRWCCCSWDKHPCF
Trigger: AAAACAAGGATGTTTATCCCAGCTGCAGCAGCACCACCGCCAGCACAGTGGGAAACTCCAGCTCACACAACACTGCTTCTCAAAGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS TCA 90 bp TCACAGCTGCTTTCCTCGAGGGGAAACTGCTTCGACTGGCCCATCTaGTGGGAGTTGTACCTCTTTCGAAGTGGAGTCTTGCCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: SQLLSSRGNCFDWPI*WELYLFRSGVLPFP
Trigger: TGGAAAAGGCAAGACTCCACTTCGAAAGAGGTACAACTCCCATCAGATGGGCCAGTCGAAGCAGTTTCCCCTCGAGGAAAGCAGCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS CCA 90 bp TTAGGGAAGGCTGGATCCGAACTTCATGTAACAGTTCCACATGGCTaGGGAGGCCTCACGAACATGGCTGAAGGCAAAAAGGAGCAAGTC +
Preference number: 5 (lower is better)
Translates to: LGKAGSELHVTVPHG*GGLTNMAEGKKEQV
Trigger: GACTTGCTCCTTTTTGCCTTCAGCCATGTTCGTGAGGCCTCCCCAGCCATGTGGAACTGTTACATGAAGTTCGGATCCAGCCTTCCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508670.1
CDS CCA 90 bp GCCATCTTTAGGGCAGAAAAGACACCATCTTTGGTTAGGGAAGGCTaGATCCGAACTTCATGTAACAGTTCCACATGGCTGGGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: AIFRAEKTPSLVREG*IRTSCNSSTWLGRP
Trigger: AGGCCTCCCCAGCCATGTGGAACTGTTACATGAAGTTCGGATCCAGCCTTCCCTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508670.1
CDS TCA 90 bp ATAAAGAACTACAATGGCAGGCAAAACTGTGGCCGCCCTAAGAACTaGACAGTCCCGCTGATTACTAGGCCTGCCCTGAAAGAACAGCAT +
Preference number: 5 (lower is better)
Translates to: IKNYNGRQNCGRPKN*TVPLITRPALKEQH
Trigger: ATGCTGTTCTTTCAGGGCAGGCCTAGTAATCAGCGGGACTGTTCAGTTCTTAGGGCGGCCACAGTTTTGCCTGCCATTGTAGTTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514832.1
CDS CCA 90 bp GAAACTCCAACTCTGCCATCTTTAGGGCAGAAAAGACACCATCTTTaGTTAGGGAAGGCTGGATCCGAACTTCATGTAACCTACGGGCAG +
Preference number: 5 (lower is better)
Translates to: ETPTLPSLGQKRHHL*LGKAGSELHVTYGQ
Trigger: CTGCCCGTAGGTTACATGAAGTTCGGATCCAGCCTTCCCTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAGTTGGAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000502571.1
ENST00000513826.1
CDS-3UTR CAA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACCCTCCGCCTGTTATaGTGGTTGAGAGGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPTLRLL*WLRGRD
Trigger: GTCCCTCCCTCTCAACCACAATAACAGGCGGAGGGT...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000340253.10
CDS-3UTR CAA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGCCACACCCACTAAGTTaGGGCATGCCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: RCSLYIPYIANRARTSQLPHPLS*GMPAKL
Trigger: AAGCTTTGCAGGCATGCCCAAACTTAGTGGGTGTGG...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCACCTGCTAGTTCTCCTTaGGGATTCCTGGGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPPASSP*GFLGPV
Trigger: CACAGGCCCCAGGAATCCCAAAGGAGAACTAGCAGG...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CAA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTTCGTGGCCCCATTGTaGTGCAGTCTCCAGTATCAA +
Preference number: 5 (lower is better)
Translates to: RCSLYIPYIANRARTSQLFVAPL*CSLQYQ
Trigger: TTGATACTGGAGACTGCACAACAATGGGGCCACGAA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTCTTTCGTGGCCCCATaGTTGTGCAGTCTCCAGTAT +
Preference number: 5 (lower is better)
Translates to: RCSLYIPYIANRARTSQLSFVAP*LCSLQY
Trigger: ATACTGGAGACTGCACAACAATGGGGCCACGAAAGA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGGCTTTCATATCGGCTTaGATCTGCTCACTGGTGACC +
Preference number: 5 (lower is better)
Translates to: RCSLYIPYIANRARTSQLAFISA*ICSLVT
Trigger: GGTCACCAGTGAGCAGATCAAAGCCGATATGAAAGC...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS CCA 90 bp AATTACTTTCTTCATCGTCTTCAAAGTCGTATCGAGCGAAGCTGTTaGGCTCTGCAGCTCGTAATGACCTCAGCCAAGGGAAGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: NYFLHRLQSRIERSC*ALQLVMTSAKGSQK
Trigger: TTTCTGACTTCCCTTGGCTGAGGTCATTACGAGCTGCAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGAAAGTAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505399.2
ENST00000508176.1
CDS-3UTR CAA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGCGCCTGTTATTGTGGTaGAGAGGGAGGGACGCTACA +
Preference number: 5 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRRLLLW*RGRDAT
Trigger: TGTAGCGTCCCTCCCTCTCAACCACAATAACAGGCG...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000340253.10
CDS-3UTR CAA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAACCCTCCGCCTGTTATaGTGGTTGAGAGGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRTLRLL*WLRGRD
Trigger: GTCCCTCCCTCTCAACCACAATAACAGGCGGAGGGT...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000340253.10
CDS-3UTR CAA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTGGCACCGTACTAGGTaGATATCAACCAATCGAGTC +
Preference number: 5 (lower is better)
Translates to: RCSLYIPYIANRARTSQLWHRTR*ISTNRV
Trigger: GACTCGATTGGTTGATATCAACCTAGTACGGTGCCA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTCGAGCACAACCCTaGGGTGGTTCACGAAACATC +
Preference number: 5 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPTRAQP*GGSRNI
Trigger: GATGTTTCGTGAACCACCCAAGGGTTGTGCTCGAGT...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCATCCTGGCTGCAGATCTaGCCGAAAGTCATTCTCCTC +
Preference number: 5 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPSWLQI*PKVILL
Trigger: GAGGAGAATGACTTTCGGCAAGATCTGCAGCCAGGA...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACCACTGGGTCCTGCTaGTTCCTCATCAACATCCAC +
Preference number: 5 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPTTGSC*FLINIH
Trigger: GTGGATGTTGATGAGGAACAAGCAGGACCCAGTGGT...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS CCA 90 bp GAAACTCCAACTCTGCCATCTTTAGGGCAGAAAAGACACCATCTTTaGTTAGGGAAGGCTGGATCCGAACTTCATGTAACAGTTCCACAT +
Preference number: 5 (lower is better)
Translates to: ETPTLPSLGQKRHHL*LGKAGSELHVTVPH
Trigger: ATGTGGAACTGTTACATGAAGTTCGGATCCAGCCTTCCCTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAGTTGGAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508670.1
CDS-3UTR CAA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCATCTTTCGTGGCCCCATaGTTGTGCAGTCTCCAGTAT +
Preference number: 5 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPSFVAP*LCSLQY
Trigger: ATACTGGAGACTGCACAACAATGGGGCCACGAAAGA...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGACTCGAGCACAACCCTaGGGTGGTTCACGAAACATC +
Preference number: 5 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRTRAQP*GGSRNI
Trigger: GATGTTTCGTGAACCACCCAAGGGTTGTGCTCGAGT...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCTCCTGGCTGCAGATCTaGCCGAAAGTCATTCTCCTC +
Preference number: 5 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLSWLQI*PKVILL
Trigger: GAGGAGAATGACTTTCGGCAAGATCTGCAGCCAGGA...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTCCTGGCTGCAGATCTaGCCGAAAGTCATTCTCCTC +
Preference number: 5 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRSWLQI*PKVILL
Trigger: GAGGAGAATGACTTTCGGCAAGATCTGCAGCCAGGA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCACCACTGGGTCCTGCTaGTTCCTCATCAACATCCAC +
Preference number: 5 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLTTGSC*FLINIH
Trigger: GTGGATGTTGATGAGGAACAAGCAGGACCCAGTGGT...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGCTTTCATATCGGCTTaGATCTGCTCACTGGTGACC +
Preference number: 5 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPAFISA*ICSLVT
Trigger: GGTCACCAGTGAGCAGATCAAAGCCGATATGAAAGC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS TCA 90 bp TGCCACTACTCGCTGAAATACACCCTTCTTCATCTGACGCATCTCTaGAATTTCCTCTCCTATTGTTTCCATACAGATGTCTGCAGACAG +
Preference number: 5 (lower is better)
Translates to: CHYSLKYTLLHLTHL*NFLSYCFHTDVCRQ
Trigger: CTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATGAAGAAGGGTGTATTTCAGCGAGTAGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS TCA 90 bp ACTGGCCAAAAGAGTCCAGCTTCAAAGCATGGCACCGTACTAGGTTaGTATCAACCAATCGAGTCCATCTTGAGTGGTCTAAAAATATGG +
Preference number: 5 (lower is better)
Translates to: TGQKSPASKHGTVLG*YQPIESILSGLKIW
Trigger: CCATATTTTTAGACCACTCAAGATGGACTCGATTGGTTGATATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGACTCTTTTGGCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511080.5
CDS CCA 90 bp GCTCTGCAGCTCGTAATGACCTCAGCCAAGGGAAGTCAGAAATCATaGAATATGGAGCTCCATCCACAACACCTTCTAAAGTATAGATTT +
Preference number: 5 (lower is better)
Translates to: ALQLVMTSAKGSQKS*NMELHPQHLLKYRF
Trigger: AAATCTATACTTTAGAAGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCTGACTTCCCTTGGCTGAGGTCATTACGAGCTGCAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000505399.2
ENST00000508176.1
ENST00000513826.1
CDS CCA 90 bp ACTTCTAACTCAAACACATGCCACTGGGCTTTAGTGCCTACTCTCTaGTCACAAACTAGGGGTTTGGGAATAAGTAAAGGAGGATCCTTT +
Preference number: 5 (lower is better)
Translates to: TSNSNTCHWALVPTL*SQTRGLGISKGGSF
Trigger: AAAGGATCCTCCTTTACTTATTCCCAAACCCCTAGTTTGTGACCAGAGAGTAGGCACTAAAGCCCAGTGGCATGTGTTTGAGTTAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509273.6
CDS-3UTR CAA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGCGCCTGTTATTGTGGTaGAGAGGGAGGGACGCTACA +
Preference number: 5 (lower is better)
Translates to: CIQFRCSLYIPYIANRARRLLLW*RGRDAT
Trigger: TGTAGCGTCCCTCCCTCTCAACCACAATAACAGGCG...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000340253.10
CDS-3UTR CAA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTTCGTGGCCCCATTGTaGTGCAGTCTCCAGTATCAA +
Preference number: 5 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRFVAPL*CSLQYQ
Trigger: TTGATACTGGAGACTGCACAACAATGGGGCCACGAA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGACCACACCCACTAAGTTaGGGCATGCCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRPHPLS*GMPAKL
Trigger: AAGCTTTGCAGGCATGCCCAAACTTAGTGGGTGTGG...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGGTCTTCAACAACATGTaGGATAAGACCTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: RCSLYIPYIANRARTSQLVFNNM*DKTSKE
Trigger: TTCCTTGGAGGTCTTATCCAACATGTTGTTGAAGAC...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTTGTTGGAGTTCTGGTaGCTAACAAGAGCTGATGAA +
Preference number: 5 (lower is better)
Translates to: RCSLYIPYIANRARTSQLLLEFW*LTRADE
Trigger: TTCATCAGCTCTTGTTAGCAACCAGAACTCCAACAA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTGGCGTGACGTGGCTTaGTTTTGGCTACTTCTGACA +
Preference number: 5 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRWRDVA*FWLLLT
Trigger: TGTCAGAAGTAGCCAAAACAAAGCCACGTCACGCCA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000513826.1
CDS-3UTR CAA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCTGGCGTGACGTGGCTTaGTTTTGGCTACTTCTGACA +
Preference number: 5 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLWRDVA*FWLLLT
Trigger: TGTCAGAAGTAGCCAAAACAAAGCCACGTCACGCCA...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000513826.1
CDS-3UTR CAA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTCTGTGATTCCACAATaGGTCATAGTGACTCCAACA +
Preference number: 5 (lower is better)
Translates to: RCSLYIPYIANRARTSQLSVIPQ*VIVTPT
Trigger: TGTTGGAGTCACTATGACCAATTGTGGAATCACAGA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATATCGAGCGAAGCTGTaGGGCTCTGCAGCTCGTAAT +
Preference number: 5 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRYRAKL*GSAARN
Trigger: ATTACGAGCTGCAGAGCCCAACAGCTTCGCTCGATA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCCCTGCTAGTTCTCCTTaGGGATTCCTGGGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAPASSP*GFLGPV
Trigger: CACAGGCCCCAGGAATCCCAAAGGAGAACTAGCAGG...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCCACAGGCTCGGCTGGTaGAAGGACGTTCCTCATCAG +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAHRLGW*KDVPHQ
Trigger: CTGATGAGGAACGTCCTTCAACCAGCCGAGCCTGTG...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CAA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATTCGTGGCCCCATTGTaGTGCAGTCTCCAGTATCAA +
Preference number: 5 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRFVAPL*CSLQYQ
Trigger: TTGATACTGGAGACTGCACAACAATGGGGCCACGAA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCTGGCACCGTACTAGGTaGATATCAACCAATCGAGTC +
Preference number: 5 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLWHRTR*ISTNRV
Trigger: GACTCGATTGGTTGATATCAACCTAGTACGGTGCCA...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATGGCGTGACGTGGCTTaGTTTTGGCTACTTCTGACT +
Preference number: 5 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRWRDVA*FWLLLT
Trigger: AGTCAGAAGTAGCCAAAACAAAGCCACGTCACGCCA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS-3UTR CAA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTGGCGTGACGTGGCTTaGTTTTGGCTACTTCATCCG +
Preference number: 5 (lower is better)
Translates to: CIQFRCSLYIPYIANRARWRDVA*FWLLHP
Trigger: CGGATGAAGTAGCCAAAACAAAGCCACGTCACGCCA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394370.7
CDS GCA 90 bp ATCTTCAACTGGCTCTCCATTGACATCACAATAGTGGATAAAAATTaGCACTACTCGCTGAAATACACCCTTCTTCATCTGACGCATCTC +
Preference number: 5 (lower is better)
Translates to: IFNWLSIDITIVDKN*HYSLKYTLLHLTHL
Trigger: GAGATGCGTCAGATGAAGAAGGGTGTATTTCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGATGTCAATGGAGAGCCAGTTGAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTCTTTCGTGGCCCCATaGTTGTGCAGTCTCCAGTAT +
Preference number: 5 (lower is better)
Translates to: CIQFRCSLYIPYIANRARSFVAP*LCSLQY
Trigger: ATACTGGAGACTGCACAACAATGGGGCCACGAAAGA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCCCACACCCACTAAGTTaGGGCATGCCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAPHPLS*GMPAKL
Trigger: AAGCTTTGCAGGCATGCCCAAACTTAGTGGGTGTGG...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTATTTTCAGGAGGAATaGGAAAAGCTCCATTACGAT +
Preference number: 5 (lower is better)
Translates to: RCSLYIPYIANRARTSQLYFQEE*EKLHYD
Trigger: ATCGTAATGGAGCTTTTCCAATTCCTCCTGAAAATA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAAAAGGTGCCTTAGCATaGGGATACAAGGAATTTCAG +
Preference number: 5 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPKGALA*GYKEFQ
Trigger: CTGAAATTCCTTGTATCCCAATGCTAAGGCACCTTT...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGCATATTTCAAGGAATTaGTGGGTCCTGCACAGTTCC +
Preference number: 5 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRHISRN*WVLHSS
Trigger: GGAACTGTGCAGGACCCACAAATTCCTTGAAATATG...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAGTCTTCAACAACATGTaGGATAAGACCTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPVFNNM*DKTSKE
Trigger: TTCCTTGGAGGTCTTATCCAACATGTTGTTGAAGAC...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCACTCGAGCACAACCCTaGGGTGGTTCACGAAACATC +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRATRAQP*GGSRNI
Trigger: GATGTTTCGTGAACCACCCAAGGGTTGTGCTCGAGT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCAACTGTTATTATCGTCATTGTaGGAGTTCTGGTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: RCSLYIPYIANRARTSQLLLSSL*EFWLLT
Trigger: TGTTAGCAACCAGAACTCCAACAATGACGATAATAA...CAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCACCACTGGGTCCTGCTaGTTCCTCATCAACATCCAC +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRATTGSC*FLINIH
Trigger: GTGGATGTTGATGAGGAACAAGCAGGACCCAGTGGT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTATCGAGCGAAGCTGTaGGGCTCTGCAGCTCGTAAT +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAYRAKL*GSAARN
Trigger: ATTACGAGCTGCAGAGCCCAACAGCTTCGCTCGATA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTTCGTGGCCCCATTGTaGTGCAGTCTCCAGTATCAA +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAFVAPL*CSLQYQ
Trigger: TTGATACTGGAGACTGCACAACAATGGGGCCACGAA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTCTTTCGTGGCCCCATaGTTGTGCAGTCTCCAGTAT +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRASFVAP*LCSLQY
Trigger: ATACTGGAGACTGCACAACAATGGGGCCACGAAAGA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGACATATTTCAAGGAATTaGTGGGTCCTGCACAGTTCC +
Preference number: 5 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRHISRN*WVLHSS
Trigger: GGAACTGTGCAGGACCCACAAATTCCTTGAAATATG...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGGTCTTCAACAACATGTaGGATAAGACCTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRVFNNM*DKTSKE
Trigger: TTCCTTGGAGGTCTTATCCAACATGTTGTTGAAGAC...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTGGCACCGTACTAGGTaGATATCAACCAATCGAGTC +
Preference number: 5 (lower is better)
Translates to: CIQFRCSLYIPYIANRARWHRTR*ISTNRV
Trigger: GACTCGATTGGTTGATATCAACCTAGTACGGTGCCA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCTTGTTGGAGTTCTGGTaGCTAACAAGAGCTGATGAA +
Preference number: 5 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLLLEFW*LTRADE
Trigger: TTCATCAGCTCTTGTTAGCAACCAGAACTCCAACAA...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTCTGTGATTCCACAATaGGTCATAGTGACTCCAACA +
Preference number: 5 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRSVIPQ*VIVTPT
Trigger: TGTTGGAGTCACTATGACCAATTGTGGAATCACAGA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATTTCGAAGTGGAGTCTaGCCTTTTCCACTTACTGAC +
Preference number: 5 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRFRSGV*PFPLTD
Trigger: GTCAGTAAGTGGAAAAGGCAAGACTCCACTTCGAAA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS TCA 90 bp CCGGAAAACATGCATCAGACAGTAAAGGACACACAGTGTCTAATGTaGTACACATATACTCAATTAACCAAAGGCTCATGTTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: PENMHQTVKDTQCLM*YTYTQLTKGSCSPI
Trigger: GATTGGAGAACATGAGCCTTTGGTTAATTGAGTATATGTGTATCACATTAGACACTGTGTGTCCTTTACTGTCTGATGCATGTTTTCCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509411.5
CDS-3UTR CAA 90 bp ATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGACCTCCCATTATTATCGTCATTGTaGGAGTTCTGGTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: ISMFLIYSLYSKPSQDLPLLSSL*EFWLLT
Trigger: TGTTAGCAACCAGAACTCCAACAATGACGATAATAA...TGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp AAAGCACAAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCGCATTATTATCGTCATaGTTGGAGTTCTGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: KAQKTQTLFNRFTQTASLALLSS*LEFWLL
Trigger: TAGCAACCAGAACTCCAACAATGACGATAATAATGC...GAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTTGTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGGCATTATTATCGTCATaGTTGGAGTTCTGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRALLSS*LEFWLL
Trigger: TAGCAACCAGAACTCCAACAATGACGATAATAATGC...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATCTGTGATTCCACAATaGGTCATAGTGACTCCAACA +
Preference number: 5 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRSVIPQ*VIVTPT
Trigger: TGTTGGAGTCACTATGACCAATTGTGGAATCACAGA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTTTCGAAGTGGAGTCTaGCCTTTTCCACTTACTGAC +
Preference number: 5 (lower is better)
Translates to: CIQFRCSLYIPYIANRARFRSGV*PFPLTD
Trigger: GTCAGTAAGTGGAAAAGGCAAGACTCCACTTCGAAA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CAA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGATTCCCTTTTGTTTACTaGAGTTCAAAGTACCTACGC +
Preference number: 5 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRFPFVY*SSKYLR
Trigger: GCGTAGGTACTTTGAACTCAAGTAAACAAAAGGGAA...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
CDS-3UTR CAA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTATTTTCAGGAGGAATaGGAAAAGCTCCATTACGAT +
Preference number: 5 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRYFQEE*EKLHYD
Trigger: ATCGTAATGGAGCTTTTCCAATTCCTCCTGAAAATA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGAAAGGTGCCTTAGCATaGGGATACAAGGAATTTCAG +
Preference number: 5 (lower is better)
Translates to: CIQFRCSLYIPYIANRARKGALA*GYKEFQ
Trigger: CTGAAATTCCTTGTATCCCAATGCTAAGGCACCTTT...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCCATATTTCAAGGAATTaGTGGGTCCTGCACAGTTCC +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAHISRN*WVLHSS
Trigger: GGAACTGTGCAGGACCCACAAATTCCTTGAAATATG...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGTTATTATCGTCATTGTaGGAGTTCTGGTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRLLSSL*EFWLLT
Trigger: TGTTAGCAACCAGAACTCCAACAATGACGATAATAA...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTCTGTGATTCCACAATaGGTCATAGTGACTCCAACA +
Preference number: 5 (lower is better)
Translates to: CIQFRCSLYIPYIANRARSVIPQ*VIVTPT
Trigger: TGTTGGAGTCACTATGACCAATTGTGGAATCACAGA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAAAGGAAATTTCCTCTCCTATaGTTTCCATACAGATGTCTG +
Preference number: 5 (lower is better)
Translates to: HKHSSTGLLKQLRSRRKRKFPLL*FPYRCL
Trigger: CAGACATCTGTATGGAAACAATAGGAGAGGAAATTT...CCTTTTTCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS TCA 90 bp ATCCTGCAGAGGGAGGTACCTAAAAATATGGCAAAGTACTTCATGTaGAAGTTGATTCATATAGTCCTTTGTTTCATCTGCTGTCATTTC +
Preference number: 5 (lower is better)
Translates to: ILQREVPKNMAKYFM*KLIHIVLCFICCHF
Trigger: GAAATGACAGCAGATGAAACAAAGGACTATATGAATCAACTTTCACATGAAGTACTTTGCCATATTTTTAGGTACCTCCCTCTGCAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000508326.5
ENST00000509411.5
ENST00000509699.6
ENST00000513826.1
CDS TCA 90 bp CTCGTCCCTCTTCTTACCCCTAAAAATATGGCAAAGTACTTCATGTaGAAGTTGATTCATATAGTCCTTTGTTTCATCTGCTGTCATTTC +
Preference number: 5 (lower is better)
Translates to: LVPLLTPKNMAKYFM*KLIHIVLCFICCHF
Trigger: GAAATGACAGCAGATGAAACAAAGGACTATATGAATCAACTTTCACATGAAGTACTTTGCCATATTTTTAGGGGTAAGAAGAGGGACGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503613.5
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAAAGGTGCCTTAGCATaGGGATACAAGGAATTTCAG +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAKGALA*GYKEFQ
Trigger: CTGAAATTCCTTGTATCCCAATGCTAAGGCACCTTT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCGTCTTCAACAACATGTaGGATAAGACCTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAVFNNM*DKTSKE
Trigger: TTCCTTGGAGGTCTTATCCAACATGTTGTTGAAGAC...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTTGTTGGAGTTCTGGTaGCTAACAAGAGCTGATGAA +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRALLEFW*LTRADE
Trigger: TTCATCAGCTCTTGTTAGCAACCAGAACTCCAACAA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGGCATTATTATCGTCATaGTTGGAGTTCTGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: CIQFRCSLYIPYIANRARALLSS*LEFWLL
Trigger: TAGCAACCAGAACTCCAACAATGACGATAATAATGC...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp AAAAGACACAAACACTCTTCAACAGGTTTACTCAAACAGCTTCGCTCAAGAAGAAAATTTCCTCTCCTATaGTTTCCATACAGATGTCTG +
Preference number: 5 (lower is better)
Translates to: KRHKHSSTGLLKQLRSRRKFPLL*FPYRCL
Trigger: CAGACATCTGTATGGAAACAATAGGAGAGGAAATTT...TCTTCTTGAGCGAAGCTGTTTGAGTAAACCTGTTGAAGAGTGTTTGTGTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS TCA 90 bp CGAGTCCATCTTGAGTGGTCTAAAAATATGGCAAAGTACTTCATGTaGAAGTTGATTCATATAGTCCTTTGTTTCATCTGCTGTCATTTC +
Preference number: 5 (lower is better)
Translates to: RVHLEWSKNMAKYFM*KLIHIVLCFICCHF
Trigger: GAAATGACAGCAGATGAAACAAAGGACTATATGAATCAACTTTCACATGAAGTACTTTGCCATATTTTTAGACCACTCAAGATGGACTCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511080.5
CDS-3UTR CAA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGTATTTTCAGGAGGAATaGGAAAAGCTCCATTACGAT +
Preference number: 5 (lower is better)
Translates to: CIQFRCSLYIPYIANRARYFQEE*EKLHYD
Trigger: ATCGTAATGGAGCTTTTCCAATTCCTCCTGAAAATA...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCGCATTATTATCGTCATaGTTGGAGTTCTGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAALLSS*LEFWLL
Trigger: TAGCAACCAGAACTCCAACAATGACGATAATAATGC...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp TGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAGGAAATTTCCTCTCCTATaGTTTCCATACAGATGTCTG +
Preference number: 5 (lower is better)
Translates to: CIQFRCSLYIPYIANRARKFPLL*FPYRCL
Trigger: CAGACATCTGTATGGAAACAATAGGAGAGGAAATTT...CCTGGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTATTTTCAGGAGGAATaGGAAAAGCTCCATTACGAT +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAYFQEE*EKLHYD
Trigger: ATCGTAATGGAGCTTTTCCAATTCCTCCTGAAAATA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCTTATTATCGTCATTGTaGGAGTTCTGGTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRALLSSL*EFWLLT
Trigger: TGTTAGCAACCAGAACTCCAACAATGACGATAATAA...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS-3UTR CAA 90 bp CTTTGTATACAATTTCGATGTTCCTTATATATTCCCTATATAGCAAACCGAGCCAAATTTCCTCTCCTATaGTTTCCATACAGATGTCTG +
Preference number: 5 (lower is better)
Translates to: LCIQFRCSLYIPYIANRAKFPLL*FPYRCL
Trigger: CAGACATCTGTATGGAAACAATAGGAGAGGAAATTT...GGCTCGGTTTGCTATATAGGGAATATATAAGGAACATCGAAATTGTATACAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS GCA 72 bp TCAGAGTCCTCTGACCCACCGGGGGAGCAGGCACACTaGCTGGACACATCCACTTCTGTAGGGCTAGGCTCG +
Preference number: 6 (lower is better)
Translates to: SESSDPPGEQAH*LDTSTSVGLGS
Trigger: CGAGCCTAGCCCTACAGAAGTGGATGTGTCCAGGCAGTGTGCCTGCTCCCCCGGTGGGTCAGAGGACTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS CAA 72 bp AAAGTACCTACGCCGACCCTCCGCCTGTTATTGTGGTaGAGAGGGAGGGACGCTACAGACACTTCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: KVPTPTLRLLLW*RGRDATDTSPA
Trigger: GGCCGGGGAAGTGTCTGTAGCGTCCCTCCCTCTCAACCACAATAACAGGCGGAGGGTCGGCGTAGGTACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000503613.5
CDS GCA 72 bp CTTCTGACTCAGATACCAGCAGTACATGGGACAGTCTaGTCCTGGCCCTGGTTAGGGGCCTCCGAGGGTAGT +
Preference number: 6 (lower is better)
Translates to: LLTQIPAVHGTV*SWPWLGASEGS
Trigger: ACTACCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTACTGCTGGTATCTGAGTCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS CCA 72 bp CAAAGTCGGGGCTTTGAGAAGCAGTGTTGTGTGAGCTaGAGTTTCCCACTGTGCTGGCGGTGGTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: QSRGFEKQCCVS*SFPLCWRWCCC
Trigger: GCAGCAGCACCACCGCCAGCACAGTGGGAAACTCCAGCTCACACAACACTGCTTCTCAAAGCCCCGACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS CCA 72 bp TTCAAAGTACCTACGCCGACCCTCCGCCTGTTATTGTaGTTGAGAGGGAGGGACGCTACAGACACTTCCCCG +
Preference number: 6 (lower is better)
Translates to: FKVPTPTLRLLL*LRGRDATDTSP
Trigger: CGGGGAAGTGTCTGTAGCGTCCCTCCCTCTCAACCACAATAACAGGCGGAGGGTCGGCGTAGGTACTTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000503613.5
CDS CCA 72 bp ACTCAGATACCAGCAGTACATGGGACAGTCTGCTCCTaGCCCTGGTTAGGGGCCTCCGAGGGTAGTCTTCAT +
Preference number: 6 (lower is better)
Translates to: TQIPAVHGTVCS*PWLGASEGSLH
Trigger: ATGAAGACTACCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTACTGCTGGTATCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS TCA 72 bp CCTTACAAAGTCGGGGCTTTGAGAAGCAGTGTTGTGTaGGCTGGAGTTTCCCACTGTGCTGGCGGTGGTGCT +
Preference number: 6 (lower is better)
Translates to: PYKVGALRSSVV*AGVSHCAGGGA
Trigger: AGCACCACCGCCAGCACAGTGGGAAACTCCAGCTCACACAACACTGCTTCTCAAAGCCCCGACTTTGTAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS TCA 72 bp CCGCCGCTGTTCACCGTCCTTACAAAGTCGGGGCTTTaGGAAGCAGTGTTGTGTGAGCTGGAGTTTCCCACT +
Preference number: 6 (lower is better)
Translates to: PPLFTVLTKSGL*EAVLCELEFPT
Trigger: AGTGGGAAACTCCAGCTCACACAACACTGCTTCTCAAAGCCCCGACTTTGTAAGGACGGTGAACAGCGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS GCA 72 bp GAGAAGCAGTGTTGTGTGAGCTGGAGTTTCCCACTGTaGTGGCGGTGGTGCTGCTGCAGCTGGGATAAACAT +
Preference number: 6 (lower is better)
Translates to: EKQCCVSWSFPL*WRWCCCSWDKH
Trigger: ATGTTTATCCCAGCTGCAGCAGCACCACCGCCAGCACAGTGGGAAACTCCAGCTCACACAACACTGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS CCA 72 bp GTTTTGGCTACTTCTGACTCAGATACCAGCAGTACATaGGACAGTCTGCTCCTGGCCCTGGTTAGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: VLATSDSDTSST*DSLLLALVRGL
Trigger: GAGGCCCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTACTGCTGGTATCTGAGTCAGAAGTAGCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS TCA 72 bp ACCATCCGGGCCATTCACAACACAGGCTCGGCTGGTTaGAGGACGTTCCTCATCAGAACACCTGCTAGTTCT +
Preference number: 6 (lower is better)
Translates to: TIRAIHNTGSAG*RTFLIRTPASS
Trigger: AGAACTAGCAGGTGTTCTGATGAGGAACGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCCCGGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS CAA 72 bp CTGCTGTCCGCTTCCGTTTCATGGCGTGACGTGGCTTaGTTTTGGCTACTTCATCCGGGCCATTCACAACAC +
Preference number: 6 (lower is better)
Translates to: LLSASVSWRDVA*FWLLHPGHSQH
Trigger: GTGTTGTGAATGGCCCGGATGAAGTAGCCAAAACAAAGCCACGTCACGCCATGAAACGGAAGCGGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394370.7
ENST00000505399.2
CDS TCA 72 bp CTTTCCTCGAGGGGAAACTGCTTCGACTGGCCCATCTaGTGGGAGTTGTACCTCTTTCGAAGTGGAGTCTTG +
Preference number: 6 (lower is better)
Translates to: LSSRGNCFDWPI*WELYLFRSGVL
Trigger: CAAGACTCCACTTCGAAAGAGGTACAACTCCCATCAGATGGGCCAGTCGAAGCAGTTTCCCCTCGAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340253.10
ENST00000394370.7
CDS TCA 72 bp TTCATCCGGGCCATTCACAACACAGGCTCGGCTGGTTaGAGGACGTTCCTCATCAGAACACCTGCTAGTTCT +
Preference number: 6 (lower is better)
Translates to: FIRAIHNTGSAG*RTFLIRTPASS
Trigger: AGAACTAGCAGGTGTTCTGATGAGGAACGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCCCGGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394370.7
ENST00000505399.2
CDS CCA 72 bp CTTCATCGTCTTCAAAGTCGTATCGAGCGAAGCTGTTaGGCTCTGCAGCTCGTAATGACCTCAGCCAAGGGA +
Preference number: 6 (lower is better)
Translates to: LHRLQSRIERSC*ALQLVMTSAKG
Trigger: TCCCTTGGCTGAGGTCATTACGAGCTGCAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000505399.2
ENST00000508176.1
ENST00000513826.1
CDS CCA 72 bp GCTGGATCCGAACTTCATGTAACAGTTCCACATGGCTaGGGAGGCCTCACGAACATGGCTGAAGGCAAAAAG +
Preference number: 6 (lower is better)
Translates to: AGSELHVTVPHG*GGLTNMAEGKK
Trigger: CTTTTTGCCTTCAGCCATGTTCGTGAGGCCTCCCCAGCCATGTGGAACTGTTACATGAAGTTCGGATCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508670.1
CDS CAA 72 bp TCTTCATCGTCTTCAAAGTCGTATCGAGCGAAGCTGTaGGGCTCTGCAGCTCGTAATGACCTCAGCCAAGGG +
Preference number: 6 (lower is better)
Translates to: SSSSSKSYRAKL*GSAARNDLSQG
Trigger: CCCTTGGCTGAGGTCATTACGAGCTGCAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000505399.2
ENST00000508176.1
ENST00000513826.1
CDS CAA 90 bp TGCCTCAAGTCCCTGTGGAGCACTCTGGCAGCTGGATGGCCCTACTaGCTTTCTGACAAAATAGCTGGAAAGGAGGAGGGACCAATTAAA +
Preference number: 6 (lower is better)
Translates to: CLKSLWSTLAAGWPY*LSDKIAGKEEGPIK
Trigger: TTTAATTGGTCCCTCCTCCTTTCCAGCTATTTTGTCAGAAAGCAAGTAGGGCCATCCAGCTGCCAGAGTGCTCCACAGGGACTTGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS GCA 72 bp CCACTTACCACTTGGCATGTATTCCCACCACCGCCCTaGACAGAGATCTACAACTCTCACAACTCGCAGATA +
Preference number: 6 (lower is better)
Translates to: PLTTWHVFPPPP*TEIYNSHNSQI
Trigger: TATCTGCGAGTTGTGAGAGTTGTAGATCTCTGTGCAGGGCGGTGGTGGGAATACATGCCAAGTGGTAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509411.5
CDS CAA 72 bp CTGCTGTCCGCTTCCGTTTCATGGCGTGACGTGGCTTaGTTTTGGCTACTTCTGACAATTCTCTGGACTGCA +
Preference number: 6 (lower is better)
Translates to: LLSASVSWRDVA*FWLLLTILWTA
Trigger: TGCAGTCCAGAGAATTGTCAGAAGTAGCCAAAACAAAGCCACGTCACGCCATGAAACGGAAGCGGACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296701.10
ENST00000513826.1
CDS CAA 72 bp CTGCTGTCCGCTTCCGTTTCATGGCGTGACGTGGCTTaGTTTTGGCTACTTCTGACTCAGATACCAGCAGTA +
Preference number: 6 (lower is better)
Translates to: LLSASVSWRDVA*FWLLLTQIPAV
Trigger: TACTGCTGGTATCTGAGTCAGAAGTAGCCAAAACAAAGCCACGTCACGCCATGAAACGGAAGCGGACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340253.10
CDS CAA 90 bp GGAAACTCCAACTCTGCCATCTTTAGGGCAGAAAAGACACCATCTTaGGTTAGGGAAGGCTGGATCCGAACTTCATGTAACCTACGGGCA +
Preference number: 6 (lower is better)
Translates to: GNSNSAIFRAEKTPS*VREGWIRTSCNLRA
Trigger: TGCCCGTAGGTTACATGAAGTTCGGATCCAGCCTTCCCTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAGTTGGAGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000502571.1
ENST00000513826.1
CDS CAA 90 bp ATAGTGCTTTCTTCATCGTCTTCAAAGTCGTATCGAGCGAAGCTGTaGGGCTCTGCAGCTCGTAATGACCTCAGCCAAGGGAAGTCAGAA +
Preference number: 6 (lower is better)
Translates to: IVLSSSSSKSYRAKL*GSAARNDLSQGKSE
Trigger: TTCTGACTTCCCTTGGCTGAGGTCATTACGAGCTGCAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGAAAGCACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS TCA 72 bp TTAGAGTGTCCACCTGCTGCATTGGGCGTAGGTATATaGTGCGGTTTCTCTCGGGTGGCATTCTTAGTATCT +
Preference number: 6 (lower is better)
Translates to: LECPPAALGVGI*CGFSRVAFLVS
Trigger: AGATACTAAGAATGCCACCCGAGAGAAACCGCATCATATACCTACGCCCAATGCAGCAGGTGGACACTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000505399.2
ENST00000513826.1
CDS TCA 72 bp TGGCTGAAGGCAAAAAGGAGCAAGTCACATCTTGACTaGTGGCAGCAAGTCACATTTTTGCCTGATGGCAGC +
Preference number: 6 (lower is better)
Translates to: WLKAKRSKSHLD*WQQVTFLPDGS
Trigger: GCTGCCATCAGGCAAAAATGTGACTTGCTGCCATCAGTCAAGATGTGACTTGCTCCTTTTTGCCTTCAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508670.1
CDS GCA 72 bp AAATACAGAGCAGTTATACACTTGAGGCCCAACCGCTaGTTCCCTCAAAAACCATGCCCAAGTCACACAGCT +
Preference number: 6 (lower is better)
Translates to: KYRAVIHLRPNR*FPQKPCPSHTA
Trigger: AGCTGTGTGACTTGGGCATGGTTTTTGAGGGAAGCAGCGGTTGGGCCTCAAGTGTATAACTGCTCTGTATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504447.1
CDS CCA 72 bp ACTACTGTACTTCACAGACTAAATCCACTTACCACTTaGCATGTATTCCCACCACCGCCCTGCACAGAGATC +
Preference number: 6 (lower is better)
Translates to: TTVLHRLNPLTT*HVFPPPPCTEI
Trigger: GATCTCTGTGCAGGGCGGTGGTGGGAATACATGCCAAGTGGTAAGTGGATTTAGTCTGTGAAGTACAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509411.5
CDS CAA 90 bp GGAAACTCCAACTCTGCCATCTTTAGGGCAGAAAAGACACCATCTTaGGTTAGGGAAGGCTGGATCCGAACTTCATGTAACAGTTCCACA +
Preference number: 6 (lower is better)
Translates to: GNSNSAIFRAEKTPS*VREGWIRTSCNSST
Trigger: TGTGGAACTGTTACATGAAGTTCGGATCCAGCCTTCCCTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAGTTGGAGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508670.1
CDS CCA 72 bp ACTCTGCCATCTTTAGGGCAGAAAAGACACCATCTTTaGTTAGGGAAGGCTGGATCCGAACTTCATGTAACC +
Preference number: 6 (lower is better)
Translates to: TLPSLGQKRHHL*LGKAGSELHVT
Trigger: GGTTACATGAAGTTCGGATCCAGCCTTCCCTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000502571.1
ENST00000513826.1
CDS CAA 90 bp AACTGGCCAAAAGAGTCCAGCTTCAAAGCATGGCACCGTACTAGGTaGATATCAACCAATCGAGTCCATCTTGAGTGGTCTTTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: NWPKESSFKAWHRTR*ISTNRVHLEWSLRR
Trigger: TCTTCTCAAAGACCACTCAAGATGGACTCGATTGGTTGATATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGACTCTTTTGGCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508485.2
CDS TCA 72 bp AAGAGTCCAGCTTCAAAGCATGGCACCGTACTAGGTTaGTATCAACCAATCGAGTCCATCTTGAGTGGTCTT +
Preference number: 6 (lower is better)
Translates to: KSPASKHGTVLG*YQPIESILSGL
Trigger: AAGACCACTCAAGATGGACTCGATTGGTTGATATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGACTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508485.2
CDS TCA 72 bp AAGAGTCCAGCTTCAAAGCATGGCACCGTACTAGGTTaGTATCAACCAATCGAGTCCATCTTGAGTGGTCTA +
Preference number: 6 (lower is better)
Translates to: KSPASKHGTVLG*YQPIESILSGL
Trigger: TAGACCACTCAAGATGGACTCGATTGGTTGATATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGACTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511080.5
CDS CCA 72 bp CTCGTAATGACCTCAGCCAAGGGAAGTCAGAAATCATaGAATATGGAGCTCCATCCACAACACCTTCTAAAG +
Preference number: 6 (lower is better)
Translates to: LVMTSAKGSQKS*NMELHPQHLLK
Trigger: CTTTAGAAGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCTGACTTCCCTTGGCTGAGGTCATTACGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000505399.2
ENST00000508176.1
ENST00000513826.1
CDS CCA 72 bp TCAAACACATGCCACTGGGCTTTAGTGCCTACTCTCTaGTCACAAACTAGGGGTTTGGGAATAAGTAAAGGA +
Preference number: 6 (lower is better)
Translates to: SNTCHWALVPTL*SQTRGLGISKG
Trigger: TCCTTTACTTATTCCCAAACCCCTAGTTTGTGACCAGAGAGTAGGCACTAAAGCCCAGTGGCATGTGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509273.6
CDS CCA 72 bp ACTCTGCCATCTTTAGGGCAGAAAAGACACCATCTTTaGTTAGGGAAGGCTGGATCCGAACTTCATGTAACA +
Preference number: 6 (lower is better)
Translates to: TLPSLGQKRHHL*LGKAGSELHVT
Trigger: TGTTACATGAAGTTCGGATCCAGCCTTCCCTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508670.1
CDS CAA 72 bp AACTCTGCCATCTTTAGGGCAGAAAAGACACCATCTTaGGTTAGGGAAGGCTGGATCCGAACTTCATGTAAC +
Preference number: 6 (lower is better)
Translates to: NSAIFRAEKTPS*VREGWIRTSCN
Trigger: GTTACATGAAGTTCGGATCCAGCCTTCCCTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000502571.1
ENST00000508670.1
ENST00000513826.1
CDS CAA 90 bp TGCCACTGGGCTTTAGTGCCTACTCTCTGGTCACAAACTAGGGGTTaGGGAATAAGTAAAGGAGGATCCTTTATTCTAGATCATGTCACT +
Preference number: 6 (lower is better)
Translates to: CHWALVPTLWSQTRG*GISKGGSFILDHVT
Trigger: AGTGACATGATCTAGAATAAAGGATCCTCCTTTACTTATTCCCAAACCCCTAGTTTGTGACCAGAGAGTAGGCACTAAAGCCCAGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509273.6
CDS TCA 72 bp GGCATATATGTCCAAATGGATTCTACCAACTCCAAATaGGAAGTTTCCACACCCACTAAGTTTGGGCATGCC +
Preference number: 6 (lower is better)
Translates to: GIYVQMDSTNSK*EVSTPTKFGHA
Trigger: GGCATGCCCAAACTTAGTGGGTGTGGAAACTTCTCATTTGGAGTTGGTAGAATCCATTTGGACATATATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000502629.1
ENST00000508326.5
ENST00000509699.6
ENST00000513826.1
ENST00000521160.5
CDS TCA 72 bp ACTCGAGCACAACCCTTGGGTGGTTCACGAAACATCTaGTCCAGTGAAATAAACTCTAGGCTGGGTAATAAT +
Preference number: 6 (lower is better)
Translates to: TRAQPLGGSRNI*SSEINSRLGNN
Trigger: ATTATTACCCAGCCTAGAGTTTATTTCACTGGATCAGATGTTTCGTGAACCACCCAAGGGTTGTGCTCGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000508485.2
ENST00000511080.5
ENST00000513826.1
CDS CAA 90 bp AACTGGCCAAAAGAGTCCAGCTTCAAAGCATGGCACCGTACTAGGTaGATATCAACCAATCGAGTCCATCTTGAGTGGTCTAAAAATATG +
Preference number: 6 (lower is better)
Translates to: NWPKESSFKAWHRTR*ISTNRVHLEWSKNM
Trigger: CATATTTTTAGACCACTCAAGATGGACTCGATTGGTTGATATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGACTCTTTTGGCCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511080.5
CDS TCA 72 bp AAAACCATTGGATCTAGTGAGACTTATTCACTATCATaGGGACAGCATGGGAAAGACCACCCCCATGATTCA +
Preference number: 6 (lower is better)
Translates to: KTIGSSETYSLS*GQHGKDHPHDS
Trigger: TGAATCATGGGGGTGGTCTTTCCCATGCTGTCCTCATGATAGTGAATAAGTCTCACTAGATCCAATGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508670.1
CDS GCA 72 bp TGTATAAAACAAAGTTTTCTGGACAGAGCTTCTCATTaGACAGGAACCTTCCTAAGTGACCAGTTGCCCTTG +
Preference number: 6 (lower is better)
Translates to: CIKQSFLDRASH*TGTFLSDQLPL
Trigger: CAAGGGCAACTGGTCACTTAGGAAGGTTCCTGTGCAATGAGAAGCTCTGTCCAGAAAACTTTGTTTTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504971.1
CDS CCA 72 bp AAACCACCTGATCTCCAACTGTCTTCAACAACATGTTaGATAAGACCTCCAAGGAAAGGAACTCGAACCATT +
Preference number: 6 (lower is better)
Translates to: KPPDLQLSSTTC*IRPPRKGTRTI
Trigger: AATGGTTCGAGTTCCTTTCCTTGGAGGTCTTATCCAACATGTTGTTGAAGACAGTTGGAGATCAGGTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000502571.1
ENST00000509699.6
ENST00000513826.1
CDS CCA 72 bp CTTCTAAAGTATAGATTTCTCTCCCCCAGGGGTACTTaGGGTATTTCTTTAAGTCTTCTTCACTTCGAGTGG +
Preference number: 6 (lower is better)
Translates to: LLKYRFLSPRGT*GISLSLLHFEW
Trigger: CCACTCGAAGTGAAGAAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGAGAGAAATCTATACTTTAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000505399.2
ENST00000508176.1
ENST00000513826.1
CDS CAA 72 bp TCTTCATCTGACGCATCTCTGAAATTTCCTCTCCTATaGTTTCCATACAGATGTCTGCAGACAGCTGTCCTT +
Preference number: 6 (lower is better)
Translates to: SSSDASLKFPLL*FPYRCLQTAVL
Trigger: AAGGACAGCTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS CAA 72 bp TTAATCATCTCAATCAAATACAGAGCAGTTATACACTaGAGGCCCAACCGCTGCTTCCCTCAAAAACCATGC +
Preference number: 6 (lower is better)
Translates to: LIISIKYRAVIH*RPNRCFPQKPC
Trigger: GCATGGTTTTTGAGGGAAGCAGCGGTTGGGCCTCAAGTGTATAACTGCTCTGTATTTGATTGAGATGATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504447.1
CDS GCA 72 bp TGGCTCTCCATTGACATCACAATAGTGGATAAAAATTaGCACTACTCGCTGAAATACACCCTTCTTCATCTG +
Preference number: 6 (lower is better)
Translates to: WLSIDITIVDKN*HYSLKYTLLHL
Trigger: CAGATGAAGAAGGGTGTATTTCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGATGTCAATGGAGAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000513826.1
CDS CCA 72 bp GTTCCCAGTGGAATACAGTTACATTGGTATTTCCAGTaGATTGTTTCAAAACAGGATCACCCTCCATTACTT +
Preference number: 6 (lower is better)
Translates to: VPSGIQLHWYFQ*IVSKQDHPPLL
Trigger: AAGTAATGGAGGGTGATCCTGTTTTGAAACAATCCACTGGAAATACCAATGTAACTGTATTCCACTGGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504447.1
CDS CCA 72 bp TTCAAAGTACCCTCCAGACTGGACCTCCTCCTTCCCTaGGAAAATCATGGCTTTATAGAACTATTATTTTAT +
Preference number: 6 (lower is better)
Translates to: FKVPSRLDLLLP*ENHGFIELLFY
Trigger: ATAAAATAATAGTTCTATAAAGCCATGATTTTCCCAGGGAAGGAGGAGGTCCAGTCTGGAGGGTACTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504971.1
CDS TCA 72 bp CTCTTGTATAATATGGGCCCAAATACATACCATGGATaGACATCATCTTTGGACAGTCTTTTAGCACTAGAT +
Preference number: 6 (lower is better)
Translates to: LLYNMGPNTYHG*TSSLDSLLALD
Trigger: ATCTAGTGCTAAAAGACTGTCCAAAGATGATGTTCATCCATGGTATGTATTTGGGCCCATATTATACAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504447.1
CDS TCA 72 bp GTAACCATTAATAACTTGGGTGGTTCACGAAACATCTaGTCCAGTGAAATAAACTCTAGGCTGGGTAATAAT +
Preference number: 6 (lower is better)
Translates to: VTINNLGGSRNI*SSEINSRLGNN
Trigger: ATTATTACCCAGCCTAGAGTTTATTTCACTGGATCAGATGTTTCGTGAACCACCCAAGTTATTAATGGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509273.6
CDS TCA 72 bp ATGCATCAGACAGTAAAGGACACACAGTGTCTAATGTaGTACACATATACTCAATTAACCAAAGGCTCATGT +
Preference number: 6 (lower is better)
Translates to: MHQTVKDTQCLM*YTYTQLTKGSC
Trigger: ACATGAGCCTTTGGTTAATTGAGTATATGTGTATCACATTAGACACTGTGTGTCCTTTACTGTCTGATGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509411.5
CDS CAA 90 bp TCACATACGTATGAACATAATCAAGGTAATTCCCAAATCTACAATTaGGTTCCCAGTGGAATACAGTTACATTGGTATTTCCAGTGGATT +
Preference number: 6 (lower is better)
Translates to: SHTYEHNQGNSQIYN*VPSGIQLHWYFQWI
Trigger: AATCCACTGGAAATACCAATGTAACTGTATTCCACTGGGAACCAAATTGTAGATTTGGGAATTACCTTGATTATGTTCATACGTATGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504447.1
CDS TCA 72 bp AGGGAGGTACCTAAAAATATGGCAAAGTACTTCATGTaGAAGTTGATTCATATAGTCCTTTGTTTCATCTGC +
Preference number: 6 (lower is better)
Translates to: REVPKNMAKYFM*KLIHIVLCFIC
Trigger: GCAGATGAAACAAAGGACTATATGAATCAACTTTCACATGAAGTACTTTGCCATATTTTTAGGTACCTCCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296701.10
ENST00000340253.10
ENST00000394370.7
ENST00000508326.5
ENST00000509411.5
ENST00000509699.6
ENST00000513826.1
CDS TCA 72 bp CTTCTTACCCCTAAAAATATGGCAAAGTACTTCATGTaGAAGTTGATTCATATAGTCCTTTGTTTCATCTGC +
Preference number: 6 (lower is better)
Translates to: LLTPKNMAKYFM*KLIHIVLCFIC
Trigger: GCAGATGAAACAAAGGACTATATGAATCAACTTTCACATGAAGTACTTTGCCATATTTTTAGGGGTAAGAAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503613.5
CDS TCA 72 bp CTTGAGTGGTCTAAAAATATGGCAAAGTACTTCATGTaGAAGTTGATTCATATAGTCCTTTGTTTCATCTGC +
Preference number: 6 (lower is better)
Translates to: LEWSKNMAKYFM*KLIHIVLCFIC
Trigger: GCAGATGAAACAAAGGACTATATGAATCAACTTTCACATGAAGTACTTTGCCATATTTTTAGACCACTCAAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511080.5