Pregenerated sensors for FBXO36-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000231534Ensembl transcript IDs: ENST00000432957.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCACATCTAGCGGTAATGCCTAGCTGGCTGTGGAGGCTCAAACAGTaGCACAGAGGCCCCACCTCTCTTTCACCTATTGGCTCCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SHLAVMPSWLWRLKQ*HRGPTSLSPIGSCP Trigger: GGGACAGGAGCCAATAGGTGAAAGAGAGGTGGGGCCTCTGTGGCACTGTTTGAGCCTCCACAGCCAGCTAGGCATTACCGCTAGATGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CCA 90 bp | ATAGACCGGCTTGACTGTGGGAAAAAGCTCCCAAACAGGGCAGAGTaGCTGAATGAGAGCGTCACATCCTCTCGTGAGAGGAAATGGAAC | + |
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Preference number: 5 (lower is better) Translates to: IDRLDCGKKLPNRAE*LNESVTSSRERKWN Trigger: GTTCCATTTCCTCTCACGAGAGGATGTGACGCTCTCATTCAGCCACTCTGCCCTGTTTGGGAGCTTTTTCCCACAGTCAAGCCGGTCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CCA 90 bp | GAGGCGGGTGGTAAAAACATCAGCTCCTACCACATGATCCAAGGATaGGCAATAGACCGGCTTGACTGTGGGAAAAAGCTCCCAAACAGG | + |
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Preference number: 5 (lower is better) Translates to: EAGGKNISSYHMIQG*AIDRLDCGKKLPNR Trigger: CCTGTTTGGGAGCTTTTTCCCACAGTCAAGCCGGTCTATTGCCCATCCTTGGATCATGTGGTAGGAGCTGATGTTTTTACCACCCGCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CCA 90 bp | ATATTGTTTACCGCTTCACATCTAGCGGTAATGCCTAGCTGGCTGTaGAGGCTCAAACAGTGCCACAGAGGCCCCACCTCTCTTTCACCT | + |
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Preference number: 5 (lower is better) Translates to: ILFTASHLAVMPSWL*RLKQCHRGPTSLSP Trigger: AGGTGAAAGAGAGGTGGGGCCTCTGTGGCACTGTTTGAGCCTCCACAGCCAGCTAGGCATTACCGCTAGATGTGAAGCGGTAAACAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS TCA 90 bp | TTGGCTTGGATTGGGGAGTGGACCCATCTCTGCATTACTAGACACTaGGGATGGTGGATCCATATGAGACTATTTGGACCATACAAAATA | + |
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Preference number: 5 (lower is better) Translates to: LAWIGEWTHLCITRH*GWWIHMRLFGPYKI Trigger: TATTTTGTATGGTCCAAATAGTCTCATATGGATCCACCATCCTCAGTGTCTAGTAATGCAGAGATGGGTCCACTCCCCAATCCAAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS GCA 72 bp | GCGGTAATGCCTAGCTGGCTGTGGAGGCTCAAACAGTaGCACAGAGGCCCCACCTCTCTTTCACCTATTGGC | + |
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Preference number: 6 (lower is better) Translates to: AVMPSWLWRLKQ*HRGPTSLSPIG Trigger: GCCAATAGGTGAAAGAGAGGTGGGGCCTCTGTGGCACTGTTTGAGCCTCCACAGCCAGCTAGGCATTACCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CCA 72 bp | ACCGCTTCACATCTAGCGGTAATGCCTAGCTGGCTGTaGAGGCTCAAACAGTGCCACAGAGGCCCCACCTCT | + |
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Preference number: 6 (lower is better) Translates to: TASHLAVMPSWL*RLKQCHRGPTS Trigger: AGAGGTGGGGCCTCTGTGGCACTGTTTGAGCCTCCACAGCCAGCTAGGCATTACCGCTAGATGTGAAGCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CCA 72 bp | TTGTTTACCGCTTCACATCTAGCGGTAATGCCTAGCTaGCTGTGGAGGCTCAAACAGTGCCACAGAGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LFTASHLAVMPS*LWRLKQCHRGP Trigger: GGGGCCTCTGTGGCACTGTTTGAGCCTCCACAGCCAGCTAGGCATTACCGCTAGATGTGAAGCGGTAAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CCA 72 bp | CTTGACTGTGGGAAAAAGCTCCCAAACAGGGCAGAGTaGCTGAATGAGAGCGTCACATCCTCTCGTGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LDCGKKLPNRAE*LNESVTSSRER Trigger: CCTCTCACGAGAGGATGTGACGCTCTCATTCAGCCACTCTGCCCTGTTTGGGAGCTTTTTCCCACAGTCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS TCA 72 bp | CTACCACATGATCCAAGGATGGGCAATAGACCGGCTTaGCTGTGGGAAAAAGCTCCCAAACAGGGCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: LPHDPRMGNRPA*LWEKAPKQGRV Trigger: CACTCTGCCCTGTTTGGGAGCTTTTTCCCACAGTCAAGCCGGTCTATTGCCCATCCTTGGATCATGTGGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CAA 72 bp | ACCTCTCTTTCACCTATTGGCTCCTGTCCCTCCACATaGGCTGCATCTGTAGGTAGGTTGTCTCTGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TSLSPIGSCPST*AASVGRLSLVL Trigger: CAGCACCAGAGACAACCTACCTACAGATGCAGCCAATGTGGAGGGACAGGAGCCAATAGGTGAAAGAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS TCA 72 bp | ACTGTGGGAAAAAGCTCCCAAACAGGGCAGAGTGGCTaGATGAGAGCGTCACATCCTCTCGTGAGAGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: TVGKSSQTGQSG*MRASHPLVRGN Trigger: ATTTCCTCTCACGAGAGGATGTGACGCTCTCATTCAGCCACTCTGCCCTGTTTGGGAGCTTTTTCCCACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CCA 72 bp | CCTGTGGAAAACCAGGGCACTGTAACCACAAGAAGATaGACAGAGGCGGGTGGTAAAAACATCAGCTCCTAC | + |
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Preference number: 6 (lower is better) Translates to: PVENQGTVTTRR*TEAGGKNISSY Trigger: GTAGGAGCTGATGTTTTTACCACCCGCCTCTGTCCATCTTCTTGTGGTTACAGTGCCCTGGTTTTCCACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CCA 72 bp | GGTAAAAACATCAGCTCCTACCACATGATCCAAGGATaGGCAATAGACCGGCTTGACTGTGGGAAAAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: GKNISSYHMIQG*AIDRLDCGKKL Trigger: GAGCTTTTTCCCACAGTCAAGCCGGTCTATTGCCCATCCTTGGATCATGTGGTAGGAGCTGATGTTTTTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CCA 72 bp | CTATTTGGACCATACAAAATAAGGGTGAGGGAGGCATaGCTTTCCTGTGGAAAACCAGGGCACTGTAACCAC | + |
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Preference number: 6 (lower is better) Translates to: LFGPYKIRVREA*LSCGKPGHCNH Trigger: GTGGTTACAGTGCCCTGGTTTTCCACAGGAAAGCCATGCCTCCCTCACCCTTATTTTGTATGGTCCAAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CCA 72 bp | GTTGTCTCTGGTGCTGACAGCATGACTGCTGGACCCTaGTTAACATCACTACAACCAAGTTCAGGGATAAAG | + |
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Preference number: 6 (lower is better) Translates to: VVSGADSMTAGP*LTSLQPSSGIK Trigger: CTTTATCCCTGAACTTGGTTGTAGTGATGTTAACCAGGGTCCAGCAGTCATGCTGTCAGCACCAGAGACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CAA 72 bp | AGGGATAAAGGAAGTGCGCCTTTCTTAAGCATCTCATaGGCTTGGATTGGGGAGTGGACCCATCTCTGCATT | + |
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Preference number: 6 (lower is better) Translates to: RDKGSAPFLSIS*AWIGEWTHLCI Trigger: AATGCAGAGATGGGTCCACTCCCCAATCCAAGCCAATGAGATGCTTAAGAAAGGCGCACTTCCTTTATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CAA 90 bp | ACCAAGTTCAGGGATAAAGGAAGTGCGCCTTTCTTAAGCATCTCATaGGCTTGGATTGGGGAGTGGACCCATCTCTGCATTACTAGACAC | + |
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Preference number: 6 (lower is better) Translates to: TKFRDKGSAPFLSIS*AWIGEWTHLCITRH Trigger: GTGTCTAGTAATGCAGAGATGGGTCCACTCCCCAATCCAAGCCAATGAGATGCTTAAGAAAGGCGCACTTCCTTTATCCCTGAACTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS TCA 72 bp | ATTGGGGAGTGGACCCATCTCTGCATTACTAGACACTaGGGATGGTGGATCCATATGAGACTATTTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: IGEWTHLCITRH*GWWIHMRLFGP Trigger: TGGTCCAAATAGTCTCATATGGATCCACCATCCTCAGTGTCTAGTAATGCAGAGATGGGTCCACTCCCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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| CDS CCA 72 bp | AAAGGAAGTGCGCCTTTCTTAAGCATCTCATTGGCTTaGATTGGGGAGTGGACCCATCTCTGCATTACTAGA | + |
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Preference number: 6 (lower is better) Translates to: KGSAPFLSISLA*IGEWTHLCITR Trigger: TCTAGTAATGCAGAGATGGGTCCACTCCCCAATCCAAGCCAATGAGATGCTTAAGAAAGGCGCACTTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432957.1 |
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