RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO34 (Homo sapiens)

Ensembl gene IDs: ENSG00000178974

Ensembl transcript IDs: ENST00000313833.5, ENST00000440021.1, ENST00000554940.1, ENST00000555087.1, ENST00000555280.1, ENST00000557647.5, ENST00000679934.1, ENST00000680658.1, ENST00000680682.1, ENST00000681074.1, ENST00000681400.1, ENST00000681904.1

Found 998 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGGTCAGGGCCCTTTGAAGTACGAGCAGACCTTGAGGAGTCCATaGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTC +
Preference number: 1 (lower is better)
Translates to: TGQGPLKYEQTLRSP*NLWIPELLSPSLAF
Trigger: GAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACTCCTCAAGGTCTGCTCGTACTTCAAAGGGCCCTGACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
3UTR TCA 90 bp CCAGATCAAGAGTGGCTGATCTGCAGCATCTGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTGAGTCTTCATCCTTTGAGGATGGGT +
Preference number: 1 (lower is better)
Translates to: PDQEWLICSICSELF*MSWMVVSLHPLRMG
Trigger: ACCCATCCTCAAAGGATGAAGACTCACCACCATCCAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAGATCAGCCACTCTTGATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
3UTR TCA 90 bp CAGTCACAGCTTTGTGTCCCACATGAAAACCAGATCAAGAGTGGCTaGTCTGCAGCATCTGCAGTGAACTCTTCTGAATGTCCTGGATGG +
Preference number: 1 (lower is better)
Translates to: QSQLCVPHENQIKSG*SAASAVNSSECPGW
Trigger: CCATCCAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAGATCAGCCACTCTTGATCTGGTTTTCATGTGGGACACAAAGCTGTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
3UTR TCA 90 bp CACATGAAAACCAGATCAAGAGTGGCTGATCTGCAGCATCTGCAGTaGACTCTTCTGAATGTCCTGGATGGTGGTGAGTCTTCATCCTTT +
Preference number: 1 (lower is better)
Translates to: HMKTRSRVADLQHLQ*TLLNVLDGGESSSF
Trigger: AAAGGATGAAGACTCACCACCATCCAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAGATCAGCCACTCTTGATCTGGTTTTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
3UTR TCA 90 bp GTTCTTCTACACTGCTGGGATCTCTGTTTTAAGTGCTCAGCTTCATaGTTGATTGCTGGGCTTCCATTTTCCCATCCAGTTCTGGAGTTC +
Preference number: 1 (lower is better)
Translates to: VLLHCWDLCFKCSAS*LIAGLPFSHPVLEF
Trigger: GAACTCCAGAACTGGATGGGAAAATGGAAGCCCAGCAATCAATCATGAAGCTGAGCACTTAAAACAGAGATCCCAGCAGTGTAGAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR TCA 90 bp AAGTCAAAGCCTTACCCAGAACAACGCCCTATCTCTTTAATTCTCTaGTGGTTGAGAGAAGTGAGGAAGCTGCAGAAGGAAAGTCAAAAG +
Preference number: 1 (lower is better)
Translates to: KSKPYPEQRPISLIL*WLREVRKLQKESQK
Trigger: CTTTTGACTTTCCTTCTGCAGCTTCCTCACTTCTCTCAACCATCAGAGAATTAAAGAGATAGGGCGTTGTTCTGGGTAAGGCTTTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555280.1
3UTR GCA 90 bp TATGTGATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTaGCATGCCCCAGCTTCTTTTCTCATCATAATAATTGTAGTTGAT +
Preference number: 1 (lower is better)
Translates to: YVIGMIAPLINHSEV*HAPASFLIIIIVVD
Trigger: ATCAACTACAATTATTATGATGAGAAAAGAAGCTGGGGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATCACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR CAA 90 bp CCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTCCTaGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCC +
Preference number: 2 (lower is better)
Translates to: PGVAEPLLSFQFTPS*GLDHPLGRGEVNHS
Trigger: GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681074.1
3UTR CAA 90 bp GAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTCCTaGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCC +
Preference number: 2 (lower is better)
Translates to: EAVSEPLLSFQFTPS*GLDHPLGRGEVNHS
Trigger: GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555280.1
3UTR CAA 90 bp AGAGATGAAGCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTCCTaGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCC +
Preference number: 2 (lower is better)
Translates to: RDEAEPLLSFQFTPS*GLDHPLGRGEVNHS
Trigger: GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGCTTCATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680682.1
3UTR CAA 90 bp CATTGTCTGCACACAGGTCAGGGCCCTTTGAAGTACGAGCAGACCTaGAGGAGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCC +
Preference number: 2 (lower is better)
Translates to: HCLHTGQGPLKYEQT*RSPWNLWIPELLSP
Trigger: GGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACTCCTCAAGGTCTGCTCGTACTTCAAAGGGCCCTGACCTGTGTGCAGACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681074.1
3UTR-3UTR CCA 90 bp AGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATCTCCTTCCTTGGGTCTaGACCATCCACTGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: SPWNLWIPELLSPSLAFNLLPWV*TIHWAG
Trigger: CCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAG...ATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
3UTR-3UTR CCA 90 bp CCTGGGTTCAAGCAATTCTTCCATCTCAACCTCCCGAGTAGCTGGGATTATAGGGCGCCCGGCCCCTTATaGGTTCTTCTACACTGCTGG +
Preference number: 2 (lower is better)
Translates to: PGFKQFFHLNLPSSWDYRAPGPL*VLLHCW
Trigger: CCAGCAGTGTAGAAGAACCCATAAGGGGCCGGGCGC...CCTATAATCCCAGCTACTCGGGAGGTTGAGATGGAAGAATTGCTTGAACCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR TCA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGTGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTG +
Preference number: 2 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALCSELF*MSWMVV
Trigger: CACCACCATCCAGGACATTCAGAAGAGTTCACTGCA...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
3UTR-3UTR TCA 90 bp CCGCGCCCGGCCCCTTATGGGTTCTTCTACACTGCTGGGATCTCTGTTTTAAGTCTGCAGCATCTGCAGTaGACTCTTCTGAATGTCCTG +
Preference number: 2 (lower is better)
Translates to: PRPAPYGFFYTAGISVLSLQHLQ*TLLNVL
Trigger: CAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAG...ACTTAAAACAGAGATCCCAGCAGTGTAGAAGAACCCATAAGGGGCCGGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR TCA 90 bp CCGCGCCCGGCCCCTTATGGGTTCTTCTACACTGCTGGGATCTCTGTTTTAAGTACCCGGGTTCAAACATaGGATGCCACTATAAACAAC +
Preference number: 2 (lower is better)
Translates to: PRPAPYGFFYTAGISVLSTRVQT*DATINN
Trigger: GTTGTTTATAGTGGCATCTCATGTTTGAACCCGGGT...ACTTAAAACAGAGATCCCAGCAGTGTAGAAGAACCCATAAGGGGCCGGGCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR TCA 90 bp GGTTGGCTCATGAGGTGTAAGAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATGGGGCTACGCTCATTTaGACGGTGTATCTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: GWLMRCKKLSLSPSLAFNGATLI*TVYLGV
Trigger: AACACCTAGATACACCGTTCAAATGAGCGTAGCCCC...ATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTCTTACACCTCATGAGCCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555280.1
3UTR-3UTR TCA 90 bp CCTGGGTTCAAGCAATTCTTCCATCTCAACCTCCCGAGTAGCTGGGATTATAGGGGGGCTACGCTCATTTaGACGGTGTATCTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: PGFKQFFHLNLPSSWDYRGATLI*TVYLGV
Trigger: AACACCTAGATACACCGTTCAAATGAGCGTAGCCCC...CCTATAATCCCAGCTACTCGGGAGGTTGAGATGGAAGAATTGCTTGAACCCAGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR TCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAACCCGGGTTCAAACATaGGATGCCACTATAAACAAC +
Preference number: 2 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTTRVQT*DATINN
Trigger: GTTGTTTATAGTGGCATCTCATGTTTGAACCCGGGT...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
3UTR-3UTR TCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTTGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTG +
Preference number: 2 (lower is better)
Translates to: PATNINLTGSSIRGLRWGCSELF*MSWMVV
Trigger: CACCACCATCCAGGACATTCAGAAGAGTTCACTGCA...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR TCA 90 bp GATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCCAGCGGGGCTACGCTCATTTaGACGGTGTATCTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: DWHDSTSDKSFRGLPCPSGATLI*TVYLGV
Trigger: AACACCTAGATACACCGTTCAAATGAGCGTAGCCCC...GCTGGGGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR TCA 90 bp GAGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAAACCCGGGTTCAAACATaGGATGCCACTATAAACAAC +
Preference number: 2 (lower is better)
Translates to: ESMEFVDPGVAEPLLSFQTRVQT*DATINN
Trigger: GTTGTTTATAGTGGCATCTCATGTTTGAACCCGGGT...TTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
3UTR-3UTR TCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACCTGCAGCATCTGCAGTaGACTCTTCTGAATGTCCTG +
Preference number: 2 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYLQHLQ*TLLNVL
Trigger: CAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAG...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR TCA 90 bp AGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGCTCAGGTTTAACGTGCACTTTCTGCAGCATCTGCAGTaGACTCTTCTGAATGTCCTG +
Preference number: 2 (lower is better)
Translates to: RGQSTHLKVKALRFNVHFLQHLQ*TLLNVL
Trigger: CAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAG...AAAGTGCACGTTAAACCTGAGCGCCTTTACCTTTAGATGAGTGCTTTGGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR TCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGGGCTACGCTCATTTaGACGGTGTATCTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHGATLI*TVYLGV
Trigger: AACACCTAGATACACCGTTCAAATGAGCGTAGCCCC...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR TCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCGGGGCTACGCTCATTTaGACGGTGTATCTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSGATLI*TVYLGV
Trigger: AACACCTAGATACACCGTTCAAATGAGCGTAGCCCC...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR TCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCTGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTG +
Preference number: 2 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSCSELF*MSWMVV
Trigger: CACCACCATCCAGGACATTCAGAAGAGTTCACTGCA...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR TCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTACCCGGGTTCAAACATaGGATGCCACTATAAACAAC +
Preference number: 2 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTTRVQT*DATINN
Trigger: GTTGTTTATAGTGGCATCTCATGTTTGAACCCGGGT...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR TCA 90 bp ATGAGGTGTAAGAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTGGTTTTTGCTTCAGATaGTCAAGTAAGGGTGTGCCC +
Preference number: 2 (lower is better)
Translates to: MRCKKLSLSPSLAFNSLLGFCFR*SSKGVP
Trigger: GGGCACACCCTTACTTGATCATCTGAAGCAAAAACC...AAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTCTTACACCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555280.1
3UTR-3UTR TCA 90 bp TCAGGTGAGGGCCTTCAGGAAGATGGCATATTTTCTGGTGTTGAGAATGGTTGTGGTTTTTGCTTCAGATaGTCAAGTAAGGGTGTGCCC +
Preference number: 2 (lower is better)
Translates to: SGEGLQEDGIFSGVENGCGFCFR*SSKGVP
Trigger: GGGCACACCCTTACTTGATCATCTGAAGCAAAAACC...ACAACCATTCTCAACACCAGAAAATATGCCATCTTCCTGAAGGCCCTCACCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681074.1
3UTR-3UTR TCA 90 bp GATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCCAGCGCTCAGCTTCATGATTaGTTGCTGGGCTTCCATTTT +
Preference number: 2 (lower is better)
Translates to: DWHDSTSDKSFRGLPCPSAQLHD*LLGFHF
Trigger: AAAATGGAAGCCCAGCAATCAATCATGAAGCTGAGC...GCTGGGGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR GCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAAAAATGCCTGAGCAATaGAGTCCTGATGATGTACAG +
Preference number: 2 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLKMPEQ*SPDDVQ
Trigger: CTGTACATCATCAGGACTGCATTGCTCAGGCATTTT...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR GCA 90 bp CCTGGGTTCAAGCAATTCTTCCATCTCAACCTCCCGAGTAGCTGGGATTATAGGAAAATGCCTGAGCAATaGAGTCCTGATGATGTACAG +
Preference number: 2 (lower is better)
Translates to: PGFKQFFHLNLPSSWDYRKMPEQ*SPDDVQ
Trigger: CTGTACATCATCAGGACTGCATTGCTCAGGCATTTT...CCTATAATCCCAGCTACTCGGGAGGTTGAGATGGAAGAATTGCTTGAACCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR GCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTTAGAGTTTAGAAAATaGCTGAGCAATGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHLEFRK*LSNAVL
Trigger: CAGGACTGCATTGCTCAGGCATTTTCTAAACTCTAA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR GCA 90 bp CCTGGGTTCAAGCAATTCTTCCATCTCAACCTCCCGAGTAGCTGGGATTATAGGTGGGTTCTTCTACACTaGTGGGATCTCTGTTTTAAG +
Preference number: 2 (lower is better)
Translates to: PGFKQFFHLNLPSSWDYRWVLLH*WDLCFK
Trigger: CTTAAAACAGAGATCCCAGCAGTGTAGAAGAACCCA...CCTATAATCCCAGCTACTCGGGAGGTTGAGATGGAAGAATTGCTTGAACCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR CAA 90 bp TATTTTCTGGTGTTGAGAATGGTTGTTATCCTAAAGAGACCCTCATaGTCTGCACACAGGTCAGGGCCCTTTGAAGTACGAGCAGACCTT +
Preference number: 2 (lower is better)
Translates to: YFLVLRMVVILKRPS*SAHRSGPFEVRADL
Trigger: AAGGTCTGCTCGTACTTCAAAGGGCCCTGACCTGTGTGCAGACAATGAGGGTCTCTTTAGGATAACAACCATTCTCAACACCAGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
3UTR-3UTR TCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTACCCGGGTTCAAACATaGGATGCCACTATAAACAAC +
Preference number: 2 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSTRVQT*DATINN
Trigger: GTTGTTTATAGTGGCATCTCATGTTTGAACCCGGGT...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR TCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCTGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTG +
Preference number: 2 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGCSELF*MSWMVV
Trigger: CACCACCATCCAGGACATTCAGAAGAGTTCACTGCA...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR TCA 90 bp GATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCCAGCCCTCTTATGAAACCATaGATGAGAGATGAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: DWHDSTSDKSFRGLPCPSPLMKP*MRDEAA
Trigger: TGCAGCTTCATCTCTCATTCATGGTTTCATAAGAGG...GCTGGGGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680658.1
3UTR-3UTR TCA 90 bp TGGCTCTATGAATTTTCCATGAAAGGAGGAAGTAGGCTTTTCTCGTTGTGGGTGAAGTGCTCAGCTTCATaGTTGATTGCTGGGCTTCCA +
Preference number: 2 (lower is better)
Translates to: WLYEFSMKGGSRLFSLWVKCSAS*LIAGLP
Trigger: TGGAAGCCCAGCAATCAATCATGAAGCTGAGCACTT...CACCCACAACGAGAAAAGCCTACTTCCTCCTTTCATGGAAAATTCATAGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR GCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTAAAATGCCTGAGCAATaGAGTCCTGATGATGTACAG +
Preference number: 2 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTKMPEQ*SPDDVQ
Trigger: CTGTACATCATCAGGACTGCATTGCTCAGGCATTTT...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR GCA 90 bp GATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCCAGCAGGCACCTGCCATCATaGCCAGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: DWHDSTSDKSFRGLPCPSRHLPS*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGATGGCAGGTGCCT...GCTGGGGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR CCA 90 bp TATGTGATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCAATTCACTCCTTCCTTaGGTCTGGACCATCCACTGG +
Preference number: 2 (lower is better)
Translates to: YVIGMIAPLINHSEVCHANSLLP*VWTIHW
Trigger: CCAGTGGATGGTCCAGACCCAAGGAAGGAGTGAATT...GGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATCACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680682.1
3UTR-3UTR TCA 90 bp TGGCTCTATGAATTTTCCATGAAAGGAGGAAGTAGGCTTTTCTCGTTGTGGGTGACCCGGGTTCAAACATaGGATGCCACTATAAACAAC +
Preference number: 2 (lower is better)
Translates to: WLYEFSMKGGSRLFSLWVTRVQT*DATINN
Trigger: GTTGTTTATAGTGGCATCTCATGTTTGAACCCGGGT...CACCCACAACGAGAAAAGCCTACTTCCTCCTTTCATGGAAAATTCATAGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR TCA 90 bp GTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCTAATGGTAAGTGCTCAGCTTCATaGTTGATTGCTGGGCTTCCA +
Preference number: 2 (lower is better)
Translates to: VVDTLPPSPRCYIAFANGKCSAS*LIAGLP
Trigger: TGGAAGCCCAGCAATCAATCATGAAGCTGAGCACTT...ACCATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR GCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGTTAGAGTTTAGAAAATaGCTGAGCAATGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMLEFRK*LSNAVL
Trigger: CAGGACTGCATTGCTCAGGCATTTTCTAAACTCTAA...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR GCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTCAAATATGTTGCCAGTaGTCAAAACATTTCTGGAAC +
Preference number: 2 (lower is better)
Translates to: PATNINLTGSSIRGLRWGQICCQ*SKHFWN
Trigger: GTTCCAGAAATGTTTTGAGCACTGGCAACATATTTG...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR TCA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTCAGATCAAGAGTGGCTaGTCTGCAGCATCTGCAGTG +
Preference number: 2 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFQIKSG*SAASAV
Trigger: CACTGCAGATGCTGCAGATCAGCCACTCTTGATCTG...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680682.1
3UTR-3UTR TCA 90 bp GTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCTAATGGTGCTCAGCTTCATGATTaGTTGCTGGGCTTCCATTTT +
Preference number: 2 (lower is better)
Translates to: VVDTLPPSPRCYIAFANGAQLHD*LLGFHF
Trigger: AAAATGGAAGCCCAGCAATCAATCATGAAGCTGAGC...ACCATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR GCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTTTAGAGTTTAGAAAATaGCTGAGCAATGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSLEFRK*LSNAVL
Trigger: CAGGACTGCATTGCTCAGGCATTTTCTAAACTCTAA...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR GCA 90 bp ATGAGGTGTAAGAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTTTAGAGTTTAGAAAATaGCTGAGCAATGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: MRCKKLSLSPSLAFNSLLLEFRK*LSNAVL
Trigger: CAGGACTGCATTGCTCAGGCATTTTCTAAACTCTAA...AAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTCTTACACCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555280.1
3UTR-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTTAGAGTTTAGAAAATaGCTGAGCAATGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHLEFRK*LSNAVL
Trigger: CAGGACTGCATTGCTCAGGCATTTTCTAAACTCTAA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR CCA 90 bp ATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAGTCACAAAGGATTTGGAGCTTGGTaGTGGAGACTGACTTCAGCT +
Preference number: 2 (lower is better)
Translates to: IVLGRVAERSLFLSGSHKGFGAW*WRLTSA
Trigger: AGCTGAAGTCAGTCTCCACCACCAAGCTCCAAATCC...TTTGTGACTACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR CCA 90 bp GCATATTTTCTGGTGTTGAGAATGGTTGTTATCCTAAAGAGACCCTCATTGTCTACCTTGAGGAGTCCATaGAATTTGTGGATCCCGGAG +
Preference number: 2 (lower is better)
Translates to: AYFLVLRMVVILKRPSLSTLRSP*NLWIPE
Trigger: CTCCGGGATCCACAAATTCCATGGACTCCTCAAGGT...AGACAATGAGGGTCTCTTTAGGATAACAACCATTCTCAACACCAGAAAATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
3UTR-3UTR TCA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGACCCGGGTTCAAACATaGGATGCCACTATAAACAAC +
Preference number: 2 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGTRVQT*DATINN
Trigger: GTTGTTTATAGTGGCATCTCATGTTTGAACCCGGGT...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR TCA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTTGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTG +
Preference number: 2 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFCSELF*MSWMVV
Trigger: CACCACCATCCAGGACATTCAGAAGAGTTCACTGCA...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR GCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTCAAATATGTTGCCAGTaGTCAAAACATTTCTGGAAC +
Preference number: 2 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSQICCQ*SKHFWN
Trigger: GTTCCAGAAATGTTTTGAGCACTGGCAACATATTTG...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR CCA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATTTTGGAGCTTGGTGGTaGAGACTGACTTCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYFGAWW*RLTSAE
Trigger: CTCAGCTGAAGTCAGTCTCCACCACCAAGCTCCAAA...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR CCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTTGTAAGAGTGGGATTTaGAGCTTGGTGGTGGAGACT +
Preference number: 2 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGCKSGI*SLVVET
Trigger: AGTCTCCACCACCAAGCTCCAAATCCCACTCTTACA...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR TCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTCTGCAGCATCTGCAGTaGACTCTTCTGAATGTCCTG +
Preference number: 2 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFLQHLQ*TLLNVL
Trigger: CAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAG...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR GCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCATTAGAGTTTAGAAAATaGCTGAGCAATGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPLEFRK*LSNAVL
Trigger: CAGGACTGCATTGCTCAGGCATTTTCTAAACTCTAA...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR TCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTACCATGAATGAGAGATaGAGCTGCAGCATCTGCAGT +
Preference number: 2 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFTMNER*SCSICS
Trigger: ACTGCAGATGCTGCAGCTTCATCTCTCATTCATGGT...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680658.1
3UTR-3UTR GCA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGTTAGAGTTTAGAAAATaGCTGAGCAATGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGLEFRK*LSNAVL
Trigger: CAGGACTGCATTGCTCAGGCATTTTCTAAACTCTAA...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR GCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCCAAATATGTTGCCAGTaGTCAAAACATTTCTGGAAC +
Preference number: 2 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGQICCQ*SKHFWN
Trigger: GTTCCAGAAATGTTTTGAGCACTGGCAACATATTTG...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR CCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCTGCTCAAAACATTTCTaGAACCCATTTTTGAGGACT +
Preference number: 2 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGCSKHF*NPFLRT
Trigger: AGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCA...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR CCA 90 bp TATGTGATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCATATCTTATGTGATTaGCATGATAGCACCTCTGAT +
Preference number: 2 (lower is better)
Translates to: YVIGMIAPLINHSEVCHAHILCD*HDSTSD
Trigger: ATCAGAGGTGCTATCATGCCAATCACATAAGATATG...GGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATCACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR GCA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTAAAATGCCTGAGCAATaGAGTCCTGATGATGTACAG +
Preference number: 2 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFKMPEQ*SPDDVQ
Trigger: CTGTACATCATCAGGACTGCATTGCTCAGGCATTTT...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR GCA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATAGGCACCTGCCATCATaGCCAGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYRHLPS*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGATGGCAGGTGCCT...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR GCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCAAAATGCCTGAGCAATaGAGTCCTGATGATGTACAG +
Preference number: 2 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCKMPEQ*SPDDVQ
Trigger: CTGTACATCATCAGGACTGCATTGCTCAGGCATTTT...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR GCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTTGGGTTCTTCTACACTaGTGGGATCTCTGTTTTAAG +
Preference number: 2 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFWVLLH*WDLCFK
Trigger: CTTAAAACAGAGATCCCAGCAGTGTAGAAGAACCCA...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR GCA 90 bp ACCATTATTTGGTATCCTTTGAGCAGGTTAGCCTTTCAACTATTTAGAGTTTCTCAAATATGTTGCCAGTaGTCAAAACATTTCTGGAAC +
Preference number: 2 (lower is better)
Translates to: TIIWYPLSRLAFQLFRVSQICCQ*SKHFWN
Trigger: GTTCCAGAAATGTTTTGAGCACTGGCAACATATTTG...AGAAACTCTAAATAGTTGAAAGGCTAACCTGCTCAAAGGATACCAAATAATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
3UTR-3UTR CAA 90 bp CCGCGCCCGGCCCCTTATGGGTTCTTCTACACTGCTGGGATCTCTGTTTTAAGTAGTGGGATTTGGAGCTaGGTGGTGGAGACTGACTTC +
Preference number: 3 (lower is better)
Translates to: PRPAPYGFFYTAGISVLSSGIWS*VVETDF
Trigger: GAAGTCAGTCTCCACCACCAAGCTCCAAATCCCACT...ACTTAAAACAGAGATCCCAGCAGTGTAGAAGAACCCATAAGGGGCCGGGCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR CCA 72 bp AAGTACGAGCAGACCTTGAGGAGTCCATGGAATTTGTaGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTC +
Preference number: 3 (lower is better)
Translates to: KYEQTLRSPWNL*IPELLSPSLAF
Trigger: GAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACTCCTCAAGGTCTGCTCGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
3UTR-3UTR CAA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACGGGGGCTACGCTCATTaGAACGGTGTATCTAGGTGT +
Preference number: 3 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHGGYAH*NGVSRC
Trigger: ACACCTAGATACACCGTTCAAATGAGCGTAGCCCCC...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR CAA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGGGGGGCTACGCTCATTaGAACGGTGTATCTAGGTGT +
Preference number: 3 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGGGYAH*NGVSRC
Trigger: ACACCTAGATACACCGTTCAAATGAGCGTAGCCCCC...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
51% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR CAA 90 bp CCTGGGTTCAAGCAATTCTTCCATCTCAACCTCCCGAGTAGCTGGGATTATAGGGGGGGCTACGCTCATTaGAACGGTGTATCTAGGTGT +
Preference number: 3 (lower is better)
Translates to: PGFKQFFHLNLPSSWDYRGGYAH*NGVSRC
Trigger: ACACCTAGATACACCGTTCAAATGAGCGTAGCCCCC...CCTATAATCCCAGCTACTCGGGAGGTTGAGATGGAAGAATTGCTTGAACCCAGG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR CCA 72 bp GAAGCTGCAGAAGGAAAGTCAAAAGCTAGCAGAGGTTaGCTCATGAGGTGTAAGAAGCTGTCTCTGAGCCCC +
Preference number: 3 (lower is better)
Translates to: EAAEGKSKASRG*LMRCKKLSLSP
Trigger: GGGGCTCAGAGACAGCTTCTTACACCTCATGAGCCAACCTCTGCTAGCTTTTGACTTTCCTTCTGCAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555280.1
3UTR TCA 72 bp GAGTGGCTGATCTGCAGCATCTGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTGAGTCTTCATCCTTTG +
Preference number: 3 (lower is better)
Translates to: EWLICSICSELF*MSWMVVSLHPL
Trigger: CAAAGGATGAAGACTCACCACCATCCAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAGATCAGCCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
3UTR TCA 72 bp GAACCCATTTTTGAGGACTACCTGCAGCATCTGCAGTaGACTCTTCTGAATGTCCTGGATGGTGGTGAGTCT +
Preference number: 3 (lower is better)
Translates to: EPIFEDYLQHLQ*TLLNVLDGGES
Trigger: AGACTCACCACCATCCAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAGGTAGTCCTCAAAAATGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR TCA 72 bp TCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATaGTCAAGTAAGGGTGTGCCCTCTGCTCTTGGTCAC +
Preference number: 3 (lower is better)
Translates to: SSSFPGSGFCFR*SSKGVPSALGH
Trigger: GTGACCAAGAGCAGAGGGCACACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
3UTR-3UTR CAA 90 bp TATGTGATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCGTGTGCCCTCTGCTCTaGGTCACTTTAACCCCTCAC +
Preference number: 3 (lower is better)
Translates to: YVIGMIAPLINHSEVCHAVCPLL*VTLTPH
Trigger: GTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACAC...GGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680682.1
3UTR-3UTR CAA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGGGGGCTACGCTCATTaGAACGGTGTATCTAGGTGT +
Preference number: 3 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGGGYAH*NGVSRC
Trigger: ACACCTAGATACACCGTTCAAATGAGCGTAGCCCCC...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR-3UTR CAA 90 bp TATGTGATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCAATTCACTCCTTCCTaGGGTCTGGACCATCCACTG +
Preference number: 3 (lower is better)
Translates to: YVIGMIAPLINHSEVCHAQFTPS*GLDHPL
Trigger: CAGTGGATGGTCCAGACCCAAGGAAGGAGTGAATTG...GGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATCACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680682.1
3UTR-3UTR CAA 90 bp GTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCTAATGGTAGTGGGATTTGGAGCTaGGTGGTGGAGACTGACTTC +
Preference number: 3 (lower is better)
Translates to: VVDTLPPSPRCYIAFANGSGIWS*VVETDF
Trigger: GAAGTCAGTCTCCACCACCAAGCTCCAAATCCCACT...ACCATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR TCA 72 bp GCTGGGATCTCTGTTTTAAGTGCTCAGCTTCATGATTaGTTGCTGGGCTTCCATTTTCCCATCCAGTTCTGG +
Preference number: 3 (lower is better)
Translates to: AGISVLSAQLHD*LLGFHFPIQFW
Trigger: CCAGAACTGGATGGGAAAATGGAAGCCCAGCAATCAATCATGAAGCTGAGCACTTAAAACAGAGATCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR CAA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGGGGGGCTACGCTCATTaGAACGGTGTATCTAGGTGT +
Preference number: 3 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGGGYAH*NGVSRC
Trigger: ACACCTAGATACACCGTTCAAATGAGCGTAGCCCCC...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
46% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR TCA 72 bp CTTTGTGTCCCACATGAAAACCAGATCAAGAGTGGCTaGTCTGCAGCATCTGCAGTGAACTCTTCTGAATGT +
Preference number: 3 (lower is better)
Translates to: LCVPHENQIKSG*SAASAVNSSEC
Trigger: ACATTCAGAAGAGTTCACTGCAGATGCTGCAGATCAGCCACTCTTGATCTGGTTTTCATGTGGGACACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
3UTR TCA 72 bp CCTTACCCAGAACAACGCCCTATCTCTTTAATTCTCTaGTGGTTGAGAGAAGTGAGGAAGCTGCAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: PYPEQRPISLIL*WLREVRKLQKE
Trigger: TTCCTTCTGCAGCTTCCTCACTTCTCTCAACCATCAGAGAATTAAAGAGATAGGGCGTTGTTCTGGGTAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555280.1
3UTR TCA 72 bp AGGCGCTCAGGTTTAACGTGCACTTTCATAGCCCCATaGAAACACAACCATTATATACACTGTAAACACCAC +
Preference number: 3 (lower is better)
Translates to: RRSGLTCTFIAP*KHNHYIHCKHH
Trigger: GTGGTGTTTACAGTGTATATAATGGTTGTGTTTTCATGGGGCTATGAAAGTGCACGTTAAACCTGAGCGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
3UTR TCA 72 bp TGCCCCAGCTTCTTTTCTCATCATAATAATTGTAGTTaGTACTTTGCCTCCAAGTCCGAGGTGCTATATAGC +
Preference number: 3 (lower is better)
Translates to: CPSFFSHHNNCS*YFASKSEVLYS
Trigger: GCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAAAGAAGCTGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR GCA 72 bp GATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATaGCCCAGCTTCTTTTCTCATCATAATAATTGTAGT +
Preference number: 3 (lower is better)
Translates to: DSTSDKSFRGLP*PSFFSHHNNCS
Trigger: ACTACAATTATTATGATGAGAAAAGAAGCTGGGGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR-3UTR CAA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGTGTTTTGTATAGTTTaGGGTAGAGTTGCAGAACGG +
Preference number: 3 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFVFCIV*GRVAER
Trigger: CCGTTCTGCAACTCTACCCAAAACTATACAAAACAC...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR GCA 72 bp CAGGACAATATTCACTTATTTCAAATATGTTGCCAGTaGTCAAAACATTTCTGGAACCCATTTTTGAGGACT +
Preference number: 3 (lower is better)
Translates to: QDNIHLFQICCQ*SKHFWNPFLRT
Trigger: AGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp ACTCCTTCCTTGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCCCCAGGGAATCCTTTCTaGGACCGGTGGCAGCACATC +
Preference number: 4 (lower is better)
Translates to: TPSLGLDHPLGRGEVNHSPGNPF*DRWQHI
Trigger: GATGTGCTGCCACCGGTCTCAGAAAGGATTCCCTGG...GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR TCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCTCACTCCCCACCGCTaGGTCGGACCGAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHLTPHR*VGPSTQ
Trigger: CTGGGTGCTCGGTCCGACTCAGCGGTGGGGAGTGAG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGGCTCACGCTGGCCCTaGCGCTTCAGGCACTCAGAC +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTGSRWP*RFRHSD
Trigger: GTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCC...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp CCTGGGTTCAAGCAATTCTTCCATCTCAACCTCCCGAGTAGCTGGGATTATAGGACCAGCCCGACGCAGTaGTGGCGGCAGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PGFKQFFHLNLPSSWDYRTSPTQ*WRQQRW
Trigger: CCACCGCTGCTGCCGCCACCACTGCGTCGGGCTGGT...CCTATAATCCCAGCTACTCGGGAGGTTGAGATGGAAGAATTGCTTGAACCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp CCGCGCCCGGCCCCTTATGGGTTCTTCTACACTGCTGGGATCTCTGTTTTAAGTCCTGGCAATAGGGCTTaGGGTGCCATCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: PRPAPYGFFYTAGISVLSPGNRA*GAIGTG
Trigger: CCCTGTGCCGATGGCACCCCAAGCCCTATTGCCAGG...ACTTAAAACAGAGATCCCAGCAGTGTAGAAGAACCCATAAGGGGCCGGGCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGCTCACTCCCCACCGCTaGGTCGGACCGAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGLTPHR*VGPSTQ
Trigger: CTGGGTGCTCGGTCCGACTCAGCGGTGGGGAGTGAG...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTACTCACTCCCCACCGCTaGGTCGGACCGAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLLTPHR*VGPSTQ
Trigger: CTGGGTGCTCGGTCCGACTCAGCGGTGGGGAGTGAG...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCGGCTCACGCTGGCCCTaGCGCTTCAGGCACTCAGAC +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAGSRWP*RFRHSD
Trigger: GTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCC...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTACTCCCAGGCTCACGCTaGCCCTGCCGCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLLPGSR*PCRFRH
Trigger: GTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAG...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
3UTR CAA 72 bp GCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTCCTaGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: AEPLLSFQFTPS*GLDHPLGRGEV
Trigger: CACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680682.1
ENST00000681074.1
CDS-3UTR TCA 90 bp ACTCCTTCCTTGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCCTGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TPSLGLDHPLGRGEVNHSCSELF*MSWMVV
Trigger: CACCACCATCCAGGACATTCAGAAGAGTTCACTGCA...GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR TCA 90 bp ACTCCTTCCTTGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCCCTGCAGCATCTGCAGTaGACTCTTCTGAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: TPSLGLDHPLGRGEVNHSLQHLQ*TLLNVL
Trigger: CAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAG...GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR TCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCTCACTCCCCACCGCTaGGTCGGACCGAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMLTPHR*VGPSTQ
Trigger: CTGGGTGCTCGGTCCGACTCAGCGGTGGGGAGTGAG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp ACTCCTTCCTTGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCCAGAGCACTGGCTCTTTaGTCCAAGAAGGCAACCATC +
Preference number: 4 (lower is better)
Translates to: TPSLGLDHPLGRGEVNHSRALAL*SKKATI
Trigger: GATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCT...GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR GCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTAACAGATCAAGCACCTaGGCTCCTGCCCCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGNRSST*APAPAA
Trigger: CGCGGCCGGGGCAGGAGCGCAGGTGCTTGATCTGTT...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679934.1
ENST00000681400.1
CDS-3UTR GCA 90 bp AGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGCTCAGGTTTAACGTGCACTTTACAACCTGCAACCACTaGGCTCCTGCCCCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: RGQSTHLKVKALRFNVHFTTCNH*APAPAA
Trigger: CGCGGCCGGGGCAGGAGCGCAGTGGTTGCAGGTTGT...AAAGTGCACGTTAAACCTGAGCGCCTTTACCTTTAGATGAGTGCTTTGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATACCAGCCCGACGCAGTaGTGGCGGCAGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHTSPTQ*WRQQRW
Trigger: CCACCGCTGCTGCCGCCACCACTGCGTCGGGCTGGT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCACCAGCCCGACGCAGTaGTGGCGGCAGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSTSPTQ*WRQQRW
Trigger: CCACCGCTGCTGCCGCCACCACTGCGTCGGGCTGGT...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGACCAGCCCGACGCAGTaGTGGCGGCAGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVTSPTQ*WRQQRW
Trigger: CCACCGCTGCTGCCGCCACCACTGCGTCGGGCTGGT...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp TCAGGTGAGGGCCTTCAGGAAGATGGCATATTTTCTGGTGTTGAGAATGGTTGTACCAGCCCGACGCAGTaGTGGCGGCAGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SGEGLQEDGIFSGVENGCTSPTQ*WRQQRW
Trigger: CCACCGCTGCTGCCGCCACCACTGCGTCGGGCTGGT...ACAACCATTCTCAACACCAGAAAATATGCCATCTTCCTGAAGGCCCTCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp ACTCCTTCCTTGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCCAGCCCAGATATCAAGTaGTCCTTCTTCTTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: TPSLGLDHPLGRGEVNHSSPDIK*SFFFAL
Trigger: CAGGGCGAAGAAGAAGGACCACTTGATATCTGGGCT...GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACCTCCCAGGCTCACGCTaGCCCTGCCGCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYLPGSR*PCRFRH
Trigger: GTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAG...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCTCCCAGGCTCACGCTaGCCCTGCCGCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMLPGSR*PCRFRH
Trigger: GTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTCTCCCAGGCTCACGCTaGCCCTGCCGCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTLPGSR*PCRFRH
Trigger: GTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAG...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACACACTCCTGCTGGCAATaGGGGGCAGTCCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTHSCWQ*GAVLRS
Trigger: GCTTCTCAGGACTGCCCCCCATTGCCAGCAGGAGTG...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp ACTCCTTCCTTGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCCTCTGCACTGTCTATGTaGAAACTCACTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TPSLGLDHPLGRGEVNHSSALSM*KLTPAG
Trigger: GCCAGCAGGAGTGAGTTTCCACATAGACAGTGCAGA...GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCCTGGCAATAGGGCTTaGGGTGCCATCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHPGNRA*GAIGTG
Trigger: CCCTGTGCCGATGGCACCCCAAGCCCTATTGCCAGG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp ACTCCTTCCTTGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCCAATTCACTCCTTCCTTaGGTCTGGACCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: TPSLGLDHPLGRGEVNHSNSLLP*VWTIHW
Trigger: CCAGTGGATGGTCCAGACCCAAGGAAGGAGTGAATT...GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
3UTR CAA 72 bp TCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTCCTaGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SEPLLSFQFTPS*GLDHPLGRGEV
Trigger: CACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR TCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCTCACTCCCCACCGCTaGGTCGGACCGAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHLTPHR*VGPSTQ
Trigger: CTGGGTGCTCGGTCCGACTCAGCGGTGGGGAGTGAG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGGCTCACGCTGGCCCTaGCGCTTCAGGCACTCAGAC +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMGSRWP*RFRHSD
Trigger: GTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCC...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGGTCAAGGACACGGACTaGTTCGCTCTGTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALVKDTD*FALWFT
Trigger: GGTGAACCACAGAGCGAACCAGTCCGTGTCCTTGAC...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTCTCCCAGGCTCACGCTaGCCCTGCCGCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSLPGSR*PCRFRH
Trigger: GTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAG...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGCTCCCAGGCTCACGCTaGCCCTGCCGCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVLPGSR*PCRFRH
Trigger: GTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAG...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp TCAGGTGAGGGCCTTCAGGAAGATGGCATATTTTCTGGTGTTGAGAATGGTTGTCTCCCAGGCTCACGCTaGCCCTGCCGCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SGEGLQEDGIFSGVENGCLPGSR*PCRFRH
Trigger: GTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAG...ACAACCATTCTCAACACCAGAAAATATGCCATCTTCCTGAAGGCCCTCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCACTCCTGCTGGCAATaGGGGGCAGTCCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHHSCWQ*GAVLRS
Trigger: GCTTCTCAGGACTGCCCCCCATTGCCAGCAGGAGTG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGCCTGGCAATAGGGCTTaGGGTGCCATCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGPGNRA*GAIGTG
Trigger: CCCTGTGCCGATGGCACCCCAAGCCCTATTGCCAGG...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCCCACAGGATTCACCTaGGTGTCAGGTGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHPTGFT*VSGASK
Trigger: CTTGGAGGCACCTGACACTCAGGTGAATCCTGTGGG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCCAGGGAATCCTTTCTaGGACCGGTGGCAGCACATC +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHPGNPF*DRWQHI
Trigger: GATGTGCTGCCACCGGTCTCAGAAAGGATTCCCTGG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGCTCACGCTGGCCCTaGCGCTTCAGGCACTCAGAC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHGSRWP*RFRHSD
Trigger: GTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCC...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTGGCTCACGCTGGCCCTaGCGCTTCAGGCACTCAGAC +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSGSRWP*RFRHSD
Trigger: GTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCC...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAACAGATCAAGCACCTaGGCTCCTGCCCCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSNRSST*APAPAA
Trigger: CGCGGCCGGGGCAGGAGCGCAGGTGCTTGATCTGTT...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679934.1
ENST00000681400.1
CDS-3UTR GCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAGGAATGAATGGGGTGTaGGGCGTCCCTCATCCCCTC +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLGMNGV*GVPHPL
Trigger: GAGGGGATGAGGGACGCCGCACACCCCATTCATTCC...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp ACTCCTTCCTTGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCCGGGTGCTCTTTCTTCTaGAGCTTCCAATATGGCTTT +
Preference number: 4 (lower is better)
Translates to: TPSLGLDHPLGRGEVNHSGCSFF*SFQYGF
Trigger: AAAGCCATATTGGAAGCTCCAGAAGAAAGAGCACCC...GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGTCAAGGACACGGACTaGTTCGCTCTGTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTVKDTD*FALWFT
Trigger: GGTGAACCACAGAGCGAACCAGTCCGTGTCCTTGAC...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGCACTCCTGCTGGCAATaGGGGGCAGTCCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGHSCWQ*GAVLRS
Trigger: GCTTCTCAGGACTGCCCCCCATTGCCAGCAGGAGTG...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTCACTCCTGCTGGCAATaGGGGGCAGTCCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGHSCWQ*GAVLRS
Trigger: GCTTCTCAGGACTGCCCCCCATTGCCAGCAGGAGTG...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCACCTGGCAATAGGGCTTaGGGTGCCATCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAPGNRA*GAIGTG
Trigger: CCCTGTGCCGATGGCACCCCAAGCCCTATTGCCAGG...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTACTCCTTCCTTGGGTCTaGACCATCCACTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLLLPWV*TIHWAG
Trigger: CCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAG...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR TCA 90 bp CCTGGGTTCAAGCAATTCTTCCATCTCAACCTCCCGAGTAGCTGGGATTATAGGCCCACAGGATTCACCTaGGTGTCAGGTGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PGFKQFFHLNLPSSWDYRPTGFT*VSGASK
Trigger: CTTGGAGGCACCTGACACTCAGGTGAATCCTGTGGG...CCTATAATCCCAGCTACTCGGGAGGTTGAGATGGAAGAATTGCTTGAACCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTACCCACAGGATTCACCTaGGTGTCAGGTGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLPTGFT*VSGASK
Trigger: CTTGGAGGCACCTGACACTCAGGTGAATCCTGTGGG...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGACAACGATCAGCTCTTaGAGGGCCACAATCCACAGA +
Preference number: 4 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALTTISS*RATIHR
Trigger: TCTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGT...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR TCA 90 bp CCGCGCCCGGCCCCTTATGGGTTCTTCTACACTGCTGGGATCTCTGTTTTAAGTACAACGATCAGCTCTTaGAGGGCCACAATCCACAGA +
Preference number: 4 (lower is better)
Translates to: PRPAPYGFFYTAGISVLSTTISS*RATIHR
Trigger: TCTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGT...ACTTAAAACAGAGATCCCAGCAGTGTAGAAGAACCCATAAGGGGCCGGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCACCTCATCCCCTCAGGTaGGGGCCTTCAGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAPHPLR*GPSGRW
Trigger: CCATCTTCCTGAAGGCCCTCACCTGAGGGGATGAGG...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR GCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCGGCTCACGCTGGCCCTaGCGCTTCAGGCACTCAGAC +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAGSRWP*RFRHSD
Trigger: GTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCC...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGGCCCATAGGGCAATaGCTGGCAATAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGWPIGQ*LAIGLG
Trigger: CCCAAGCCCTATTGCCAGGCATTGCCCTATGGGCCA...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTATGGCCCATAGGGCAATaGCTGGCAATAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLWPIGQ*LAIGLG
Trigger: CCCAAGCCCTATTGCCAGGCATTGCCCTATGGGCCA...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACATCTTCTTCGCCCTGGTaGATCGTTGCAGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTSSSPW*IVADGA
Trigger: TGCACCATCTGCAACGATCCACCAGGGCGAAGAAGA...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACGTCAAGGACACGGACTaGTTCGCTCTGTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHVKDTD*FALWFT
Trigger: GGTGAACCACAGAGCGAACCAGTCCGTGTCCTTGAC...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAGCACCGTCCCAGGCCTaGTCCTCCTTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLAPSQA*SSLGEQ
Trigger: TTGTTCTCCTAAGGAGGACCAGGCCTGGGACGGTGC...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTACACTCCTGCTGGCAATaGGGGGCAGTCCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALHSCWQ*GAVLRS
Trigger: GCTTCTCAGGACTGCCCCCCATTGCCAGCAGGAGTG...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCAGCATCTTCAAGCTaGCTGGCCTCTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTAASSS*LASEDS
Trigger: AGAGTCTTCAGAGGCCAGCCAGCTTGAAGATGCTGC...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGGGCTGGCAGTACAAATaGCTCAGCAGACCCACTTTT +
Preference number: 4 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALGWQYK*LSRPTF
Trigger: AAAAGTGGGTCTGCTGAGCCATTTGTACTGCCAGCC...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACCCTGGCAATAGGGCTTaGGGTGCCATCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDPGNRA*GAIGTG
Trigger: CCCTGTGCCGATGGCACCCCAAGCCCTATTGCCAGG...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGCGCCCGGCCCCTTATaGGTTCTTCTACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALAPGPL*VLLHCW
Trigger: CCAGCAGTGTAGAAGAACCCATAAGGGGCCGGGCGC...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR CAA 72 bp TTGAAGTACGAGCAGACCTTGAGGAGTCCATGGAATTaGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: LKYEQTLRSPWN*WIPELLSPSLA
Trigger: AGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACTCCTCAAGGTCTGCTCGTACTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR TCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCCCACAGGATTCACCTaGGTGTCAGGTGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMPTGFT*VSGASK
Trigger: CTTGGAGGCACCTGACACTCAGGTGAATCCTGTGGG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCCAACTGGGAATAGTCTaGCAAGTGCTGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAQLGIV*QVLTRW
Trigger: CCACCTGGTCAGCACTTGTCAGACTATTCCCAGTTG...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCCAGGGAATCCTTTCTaGGACCGGTGGCAGCACATC +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMPGNPF*DRWQHI
Trigger: GATGTGCTGCCACCGGTCTCAGAAAGGATTCCCTGG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGGGTTTTTGCTTCAGATaGTCAAGTAAGGGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALGFCFR*SSKGVP
Trigger: GGGCACACCCTTACTTGATCATCTGAAGCAAAAACC...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR GCA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGAGCCTGAGTGCTATTTaGAAGCAATACTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALSLSAI*KQYSAH
Trigger: GTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCT...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR GCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGTCTCCAGGAAGTCATaGGACACCTGCTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTVSRKS*DTCFFQ
Trigger: TTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAGAC...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR GCA 90 bp ACTCCTTCCTTGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCCTTTTCTTGCACTGTTTaGAAGGATCCTCTCTATAGC +
Preference number: 4 (lower is better)
Translates to: TPSLGLDHPLGRGEVNHSFSCTV*KDPLYS
Trigger: GCTATAGAGAGGATCCTTGCAAACAGTGCAAGAAAA...GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTCTTCTTCGCCCTGGTaGATCGTTGCAGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHSSSPW*IVADGA
Trigger: TGCACCATCTGCAACGATCCACCAGGGCGAAGAAGA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCCCTTCTTCTTCGCCCTaGTGGATCGTTGCAGATGGT +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAPSSSP*WIVADG
Trigger: ACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGG...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCCTTCTTCTTCGCCCTaGTGGATCGTTGCAGATGGT +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHPSSSP*WIVADG
Trigger: ACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCTGCAGGCACACCTCTaGATTGGCCAGAAAACCTCA +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHLQAHL*IGQKTS
Trigger: TGAGGTTTTCTGGCCAATCCAGAGGTGTGCCTGCAG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGGTCAAGGACACGGACTaGTTCGCTCTGTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGVKDTD*FALWFT
Trigger: GGTGAACCACAGAGCGAACCAGTCCGTGTCCTTGAC...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTGCACCGTCCCAGGCCTaGTCCTCCTTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTAPSQA*SSLGEQ
Trigger: TTGTTCTCCTAAGGAGGACCAGGCCTGGGACGGTGC...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGCACCGTCCCAGGCCTaGTCCTCCTTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALAPSQA*SSLGEQ
Trigger: TTGTTCTCCTAAGGAGGACCAGGCCTGGGACGGTGC...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGCACCGTCCCAGGCCTaGTCCTCCTTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMAPSQA*SSLGEQ
Trigger: TTGTTCTCCTAAGGAGGACCAGGCCTGGGACGGTGC...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCACCGTCCCAGGCCTaGTCCTCCTTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAAPSQA*SSLGEQ
Trigger: TTGTTCTCCTAAGGAGGACCAGGCCTGGGACGGTGC...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGCTCAGGTTTAACGTGCACTTTGCACCGTCCCAGGCCTaGTCCTCCTTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: RGQSTHLKVKALRFNVHFAPSQA*SSLGEQ
Trigger: TTGTTCTCCTAAGGAGGACCAGGCCTGGGACGGTGC...AAAGTGCACGTTAAACCTGAGCGCCTTTACCTTTAGATGAGTGCTTTGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGAATCAACAGCATCTGTaGGCAATTCAGAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALNQQHL*AIQRLG
Trigger: CCCAAGCCTCTGAATTGCCCACAGATGCTGTTGATT...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGCATCTTCAAGCTGGCTaGCCTCTGAAGACTCTTTTG +
Preference number: 4 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALHLQAG*PLKTLL
Trigger: CAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATG...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACACCTGCTTCTTCCAACTaGATGCCTCAAGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTPASSN*MPQALV
Trigger: TACCAGTGCTTGAGGCATCCAGTTGGAAGAAGCAGG...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGGGCTCCAAAAGCTGCTaGATTTTAAACCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALGSKSC*ILNLVS
Trigger: GGAGACCAGGTTTAAAATCCAGCAGCTTTTGGAGCC...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCACATCCAATACCCTaGCCCATAGGGCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGAHPIP*PIGQCL
Trigger: CAGGCATTGCCCTATGGGCCAGGGTATTGGATGTGC...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCTCCTTCCTTGGGTCTaGACCATCCACTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHLLPWV*TIHWAG
Trigger: CCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGGCGCCCGGCCCCTTATaGGTTCTTCTACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVAPGPL*VLLHCW
Trigger: CCAGCAGTGTAGAAGAACCCATAAGGGGCCGGGCGC...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680682.1
CDS-3UTR CCA 90 bp AATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTGACTTGGGGAATGAATaGGGTGTGCGGCGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: NLWIPELLSPSLAFNSLLDLGNE*GVRRPS
Trigger: TGAGGGACGCCGCACACCCCATTCATTCCCCAAGTC...AAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR TCA 90 bp CCGCGCCCGGCCCCTTATGGGTTCTTCTACACTGCTGGGATCTCTGTTTTAAGTTTGCCTTCATCAGCCTaGGTGCTATTTGCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: PRPAPYGFFYTAGISVLSLPSSA*VLFASN
Trigger: ATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAA...ACTTAAAACAGAGATCCCAGCAGTGTAGAAGAACCCATAAGGGGCCGGGCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACCCCACAGGATTCACCTaGGTGTCAGGTGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDPTGFT*VSGASK
Trigger: CTTGGAGGCACCTGACACTCAGGTGAATCCTGTGGG...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GAGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAAACAACGATCAGCTCTTaGAGGGCCACAATCCACAGA +
Preference number: 4 (lower is better)
Translates to: ESMEFVDPGVAEPLLSFQTTISS*RATIHR
Trigger: TCTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGT...TTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR TCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTCAACTGGGAATAGTCTaGCAAGTGCTGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGQLGIV*QVLTRW
Trigger: CCACCTGGTCAGCACTTGTCAGACTATTCCCAGTTG...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTACAACTGGGAATAGTCTaGCAAGTGCTGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLQLGIV*QVLTRW
Trigger: CCACCTGGTCAGCACTTGTCAGACTATTCCCAGTTG...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAAAAGCCATGTACTGCTaGGGCTCCAAAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLKAMYC*GSKSCW
Trigger: CCAGCAGCTTTTGGAGCCTCAGCAGTACATGGCTTT...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACCCAGGGAATCCTTTCTaGGACCGGTGGCAGCACATC +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDPGNPF*DRWQHI
Trigger: GATGTGCTGCCACCGGTCTCAGAAAGGATTCCCTGG...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCGGGGCTACGCTCATTTaGACGGTGTATCTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAGATLI*TVYLGV
Trigger: AACACCTAGATACACCGTTCAAATGAGCGTAGCCCC...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHCSELF*MSWMVV
Trigger: CACCACCATCCAGGACATTCAGAAGAGTTCACTGCA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCTGCAGCATCTGCAGTaGACTCTTCTGAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHLQHLQ*TLLNVL
Trigger: CAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATCAGATCAAGAGTGGCTaGTCTGCAGCATCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SPWNLWIPELLSPSLAFNQIKSG*SAASAV
Trigger: CACTGCAGATGCTGCAGATCAGCCACTCTTGATCTG...ATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR TCA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGGCTCAGCTTCATGATTaGTTGCTGGGCTTCCATTTT +
Preference number: 4 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALAQLHD*LLGFHF
Trigger: AAAATGGAAGCCCAGCAATCAATCATGAAGCTGAGC...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680682.1
CDS-3UTR TCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCCTCAGAAGGCTGAGGTaGGAAGATCACTTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGALRRLR*EDHLSL
Trigger: TAGGCTCAAGTGATCTTCTCACCTCAGCCTTCTGAG...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679934.1
ENST00000681400.1
CDS-3UTR GCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACAGAGCACTGGCTCTTTaGTCCAAGAAGGCAACCATC +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHRALAL*SKKATI
Trigger: GATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCT...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCATAGGACTCAGACACTaGAGGCACACCTCTGGATTG +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAIGLRH*RHTSGL
Trigger: CAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTAT...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACAAGTCATGCGACACCTaGTTCTTCCAACTGGATGCC +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHKSCDT*FFQLDA
Trigger: GGCATCCAGTTGGAAGAAGCAGGTGTCGCATGACTT...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTGGCCCATAGGGCAATaGCTGGCAATAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHWPIGQ*LAIGLG
Trigger: CCCAAGCCCTATTGCCAGGCATTGCCCTATGGGCCA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACTGGCCCATAGGGCAATaGCTGGCAATAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDWPIGQ*LAIGLG
Trigger: CCCAAGCCCTATTGCCAGGCATTGCCCTATGGGCCA...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCTGGCCCATAGGGCAATaGCTGGCAATAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSWPIGQ*LAIGLG
Trigger: CCCAAGCCCTATTGCCAGGCATTGCCCTATGGGCCA...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCGCGCCCGGCCCCTTATGGGTTCTTCTACACTGCTGGGATCTCTGTTTTAAGTAGCTTCAGTCCCTTTTaGTTTCTTATGGATTGCCCG +
Preference number: 4 (lower is better)
Translates to: PRPAPYGFFYTAGISVLSSFSPF*FLMDCP
Trigger: CGGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCT...ACTTAAAACAGAGATCCCAGCAGTGTAGAAGAACCCATAAGGGGCCGGGCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGTTCAGAGGTTTGCCATaGCCCAGCTTCTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALFRGLP*PSFFSH
Trigger: ATGAGAAAAGAAGCTGGGGCATGGCAAACCTCTGAA...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680682.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACAGCCCAGATATCAAGTaGTCCTTCTTCTTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHSPDIK*SFFFAL
Trigger: CAGGGCGAAGAAGAAGGACCACTTGATATCTGGGCT...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTACTGCAGGCACACCTCTaGATTGGCCAGAAAACCTCA +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLLQAHL*IGQKTS
Trigger: TGAGGTTTTCTGGCCAATCCAGAGGTGTGCCTGCAG...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGACTGGTTCGCTCTGTaGTTCACCAACCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTDWFAL*FTNLKI
Trigger: AATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTC...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp AGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGCTCAGGTTTAACGTGCACTTTGTCAAGGACACGGACTaGTTCGCTCTGTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: RGQSTHLKVKALRFNVHFVKDTD*FALWFT
Trigger: GGTGAACCACAGAGCGAACCAGTCCGTGTCCTTGAC...AAAGTGCACGTTAAACCTGAGCGCCTTTACCTTTAGATGAGTGCTTTGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTCTGCACTGTCTATGTaGAAACTCACTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGASALSM*KLTPAG
Trigger: GCCAGCAGGAGTGAGTTTCCACATAGACAGTGCAGA...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGGCAGCATCTTCAAGCTaGCTGGCCTCTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGAASSS*LASEDS
Trigger: AGAGTCTTCAGAGGCCAGCCAGCTTGAAGATGCTGC...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAGCAGCATCTTCAAGCTaGCTGGCCTCTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLAASSS*LASEDS
Trigger: AGAGTCTTCAGAGGCCAGCCAGCTTGAAGATGCTGC...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCAGCATCTTCAAGCTaGCTGGCCTCTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGAASSS*LASEDS
Trigger: AGAGTCTTCAGAGGCCAGCCAGCTTGAAGATGCTGC...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTTCCACAGAAGAGGCTaGCAGTACAAATGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHFHRRG*QYKWLS
Trigger: GCTGAGCCATTTGTACTGCCAGCCTCTTCTGTGGAA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACACCAGCGAGAATCTGCTaGCCTGATATTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTPARIC*PDIVVL
Trigger: GAGTACTACAATATCAGGCCAGCAGATTCTCGCTGG...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCTGGCAATAGGGCTTaGGGTGCCATCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPPGNRA*GAIGTG
Trigger: CCCTGTGCCGATGGCACCCCAAGCCCTATTGCCAGG...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTGCACATCCAATACCCTaGCCCATAGGGCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTAHPIP*PIGQCL
Trigger: CAGGCATTGCCCTATGGGCCAGGGTATTGGATGTGC...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGCACATCCAATACCCTaGCCCATAGGGCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMAHPIP*PIGQCL
Trigger: CAGGCATTGCCCTATGGGCCAGGGTATTGGATGTGC...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCACATCCAATACCCTaGCCCATAGGGCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAAHPIP*PIGQCL
Trigger: CAGGCATTGCCCTATGGGCCAGGGTATTGGATGTGC...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAAACCTCCCGAGTAGCTaGGATTATAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLNLPSS*DYRHLP
Trigger: TGGCAGGTGCCTATAATCCCAGCTACTCGGGAGGTT...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR CAA 72 bp GCTTCAGATGATCAAGTAAGGGTGTGCCCTCTGCTCTaGGTCACTTTAACCCCTCACGCAGTCACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: ASDDQVRVCPLL*VTLTPHAVTAL
Trigger: CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTGATCATCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR TCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCCCCACAGGATTCACCTaGGTGTCAGGTGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAPTGFT*VSGASK
Trigger: CTTGGAGGCACCTGACACTCAGGTGAATCCTGTGGG...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAAAGCTGGCTGGCCTCTaGAGACTCTTTTGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLKLAGL*RLFCCA
Trigger: AGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTT...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCCCAGGGAATCCTTTCTaGGACCGGTGGCAGCACATC +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAPGNPF*DRWQHI
Trigger: GATGTGCTGCCACCGGTCTCAGAAAGGATTCCCTGG...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TGGCTCTATGAATTTTCCATGAAAGGAGGAAGTAGGCTTTTCTCGTTGTGGGTGCCAGGGAATCCTTTCTaGGACCGGTGGCAGCACATC +
Preference number: 4 (lower is better)
Translates to: WLYEFSMKGGSRLFSLWVPGNPF*DRWQHI
Trigger: GATGTGCTGCCACCGGTCTCAGAAAGGATTCCCTGG...CACCCACAACGAGAAAAGCCTACTTCCTCCTTTCATGGAAAATTCATAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAGGGGCTACGCTCATTTaGACGGTGTATCTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLGATLI*TVYLGV
Trigger: AACACCTAGATACACCGTTCAAATGAGCGTAGCCCC...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGGGGCTACGCTCATTTaGACGGTGTATCTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGGATLI*TVYLGV
Trigger: AACACCTAGATACACCGTTCAAATGAGCGTAGCCCC...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTATGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLCSELF*MSWMVV
Trigger: CACCACCATCCAGGACATTCAGAAGAGTTCACTGCA...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCAGATCAAGAGTGGCTaGTCTGCAGCATCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMQIKSG*SAASAV
Trigger: CACTGCAGATGCTGCAGATCAGCCACTCTTGATCTG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR GCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTTCATAGGAGTTCTCTaGGTTTCCCTGCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHFIGVL*VSLLTS
Trigger: GGAAGTCAGCAGGGAAACGCAGAGAACTCCTATGAA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACGTGCTCAATGCCACATaGAAAAGGCTCAGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHVLNAT*KRLRLV
Trigger: TACCAACCTGAGCCTTTTGCATGTGGCATTGAGCAC...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCAGAACAGTGCTCAATaGCACATGCAAAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHQNSAQ*HMQKAQ
Trigger: CTGAGCCTTTTGCATGTGGCATTGAGCACTGTTCTG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAATAGGACTCAGACACTaGAGGCACACCTCTGGATTG +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLIGLRH*RHTSGL
Trigger: CAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTAT...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGATAGGACTCAGACACTaGAGGCACACCTCTGGATTG +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGIGLRH*RHTSGL
Trigger: CAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTAT...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTTGCAAGCAATACTCTaGCCACATTTCGACGGAAGC +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHLQAIL*PHFDGS
Trigger: GCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACAGCCTGAGTGCTATTTaGAAGCAATACTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHSLSAI*KQYSAH
Trigger: GTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCT...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGAAGTCATGCGACACCTaGTTCTTCCAACTGGATGCC +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGKSCDT*FFQLDA
Trigger: GGCATCCAGTTGGAAGAAGCAGGTGTCGCATGACTT...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCTGGGTTCAAGCAATTCTTCCATCTCAACCTCCCGAGTAGCTGGGATTATAGGGTCTCCAGGAAGTCATaGGACACCTGCTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PGFKQFFHLNLPSSWDYRVSRKS*DTCFFQ
Trigger: TTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAGAC...CCTATAATCCCAGCTACTCGGGAGGTTGAGATGGAAGAATTGCTTGAACCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTGGCCCATAGGGCAATaGCTGGCAATAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAWPIGQ*LAIGLG
Trigger: CCCAAGCCCTATTGCCAGGCATTGCCCTATGGGCCA...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACGGGATTATAGGCACCTaGCATCATGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHGIIGT*HHAQLI
Trigger: AATTAGCTGGGCATGATGGCAGGTGCCTATAATCCC...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGTCACCACAAACAGTaGCTCGTACCCCTCAGTATC +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGCHHKQ*LVPLSI
Trigger: GATACTGAGGGGTACGAGGCACTGTTTGTGGTGACA...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681904.1
CDS-3UTR CCA 90 bp AGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGCTCAGGTTTAACGTGCACTTTTCTTCTTCGCCCTGGTaGATCGTTGCAGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: RGQSTHLKVKALRFNVHFSSSPW*IVADGA
Trigger: TGCACCATCTGCAACGATCCACCAGGGCGAAGAAGA...AAAGTGCACGTTAAACCTGAGCGCCTTTACCTTTAGATGAGTGCTTTGGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACTCTTCTTCGCCCTGGTaGATCGTTGCAGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYSSSPW*IVADGA
Trigger: TGCACCATCTGCAACGATCCACCAGGGCGAAGAAGA...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTACCTTCTTCTTCGCCCTaGTGGATCGTTGCAGATGGT +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALPSSSP*WIVADG
Trigger: ACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGG...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCGCGCCCGGCCCCTTATGGGTTCTTCTACACTGCTGGGATCTCTGTTTTAAGTATCCTGTTACTACACTaGTGGGATGCAAAGAATGCA +
Preference number: 4 (lower is better)
Translates to: PRPAPYGFFYTAGISVLSILLLH*WDAKNA
Trigger: TGCATTCTTTGCATCCCACCAGTGTAGTAACAGGAT...ACTTAAAACAGAGATCCCAGCAGTGTAGAAGAACCCATAAGGGGCCGGGCGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACGGCACACCTCTGGATTaGCCAGAAAACCTCACAATT +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHGTPLD*PENLTI
Trigger: AATTGTGAGGTTTTCTGGCCAATCCAGAGGTGTGCC...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCACTGCAGGCACACCTCTaGATTGGCCAGAAAACCTCA +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFALQAHL*IGQKTS
Trigger: TGAGGTTTTCTGGCCAATCCAGAGGTGTGCCTGCAG...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTACTGCAGGCACACCTCTaGATTGGCCAGAAAACCTCA +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALLQAHL*IGQKTS
Trigger: TGAGGTTTTCTGGCCAATCCAGAGGTGTGCCTGCAG...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTTCTTCACAAGCTCCTaGGGCAGAATAGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHFFTSS*GRIGLR
Trigger: TCTGAGTCCTATTCTGCCCCAGGAGCTTGTGAAGAA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTGTCAAGGACACGGACTaGTTCGCTCTGTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSVKDTD*FALWFT
Trigger: GGTGAACCACAGAGCGAACCAGTCCGTGTCCTTGAC...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCGTCAAGGACACGGACTaGTTCGCTCTGTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSVKDTD*FALWFT
Trigger: GGTGAACCACAGAGCGAACCAGTCCGTGTCCTTGAC...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCGCACCGTCCCAGGCCTaGTCCTCCTTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAAPSQA*SSLGEQ
Trigger: TTGTTCTCCTAAGGAGGACCAGGCCTGGGACGGTGC...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCCACTCCTGCTGGCAATaGGGGGCAGTCCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGHSCWQ*GAVLRS
Trigger: GCTTCTCAGGACTGCCCCCCATTGCCAGCAGGAGTG...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTCTGCACTGTCTATGTaGAAACTCACTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGSALSM*KLTPAG
Trigger: GCCAGCAGGAGTGAGTTTCCACATAGACAGTGCAGA...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCATCTTCAAGCTGGCTaGCCTCTGAAGACTCTTTTG +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHHLQAG*PLKTLL
Trigger: CAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCCATCTTCAAGCTGGCTaGCCTCTGAAGACTCTTTTG +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAHLQAG*PLKTLL
Trigger: CAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATG...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGGCTGGCAGTACAAATaGCTCAGCAGACCCACTTTT +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGGWQYK*LSRPTF
Trigger: AAAAGTGGGTCTGCTGAGCCATTTGTACTGCCAGCC...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTATTCCACAGAAGAGGCTaGCAGTACAAATGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLFHRRG*QYKWLS
Trigger: GCTGAGCCATTTGTACTGCCAGCCTCTTCTGTGGAA...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTATCCTCTCTATAGCGTaGATCTCGAACCCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGILSIA*ISNPAR
Trigger: TCTCGCTGGGTTCGAGATCCACGCTATAGAGAGGAT...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GGTTGGCTCATGAGGTGTAAGAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATATCCTCTCTATAGCGTaGATCTCGAACCCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: GWLMRCKKLSLSPSLAFNILSIA*ISNPAR
Trigger: TCTCGCTGGGTTCGAGATCCACGCTATAGAGAGGAT...ATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTCTTACACCTCATGAGCCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAATCCTCTCTATAGCGTaGATCTCGAACCCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLILSIA*ISNPAR
Trigger: TCTCGCTGGGTTCGAGATCCACGCTATAGAGAGGAT...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATATCCTCTCTATAGCGTaGATCTCGAACCCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: SPWNLWIPELLSPSLAFNILSIA*ISNPAR
Trigger: TCTCGCTGGGTTCGAGATCCACGCTATAGAGAGGAT...ATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCACATCCAATACCCTaGCCCATAGGGCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHAHPIP*PIGQCL
Trigger: CAGGCATTGCCCTATGGGCCAGGGTATTGGATGTGC...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACGCACATCCAATACCCTaGCCCATAGGGCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDAHPIP*PIGQCL
Trigger: CAGGCATTGCCCTATGGGCCAGGGTATTGGATGTGC...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACTCCTTCCTTGGGTCTaGACCATCCACTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPLLPWV*TIHWAG
Trigger: CCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAG...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp AGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATAATTCACTCCTTCCTTaGGTCTGGACCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: SPWNLWIPELLSPSLAFNNSLLP*VWTIHW
Trigger: CCAGTGGATGGTCCAGACCCAAGGAAGGAGTGAATT...ATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR TCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAAAATGGCTTTCGAGATaGTGCTTTACCGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLKWLSR*CFTERG
Trigger: GCCTCTCTCGGTAAAGCATCATCTCGAAAGCCATTT...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTTGCCTTCATCAGCCTaGGTGCTATTTGCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGALPSSA*VLFASN
Trigger: ATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAA...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGCTCAGGTTTAACGTGCACTTTACAACGATCAGCTCTTaGAGGGCCACAATCCACAGA +
Preference number: 4 (lower is better)
Translates to: RGQSTHLKVKALRFNVHFTTISS*RATIHR
Trigger: TCTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGT...AAAGTGCACGTTAAACCTGAGCGCCTTTACCTTTAGATGAGTGCTTTGGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGACAACGATCAGCTCTTaGAGGGCCACAATCCACAGA +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMTTISS*RATIHR
Trigger: TCTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCAACTGGGAATAGTCTaGCAAGTGCTGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHQLGIV*QVLTRW
Trigger: CCACCTGGTCAGCACTTGTCAGACTATTCCCAGTTG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAAAGCTGGCTGGCCTCTaGAGACTCTTTTGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALKLAGL*RLFCCA
Trigger: AGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTT...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TGGCTCATGAGGTGTAAGAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATTCAAAGCTGGCTGGCCTCTaGAGACTCTTTTGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: WLMRCKKLSLSPSLAFNSKLAGL*RLFCCA
Trigger: AGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTT...TGAATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTCTTACACCTCATGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR TCA 90 bp AGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGCTCAGGTTTAACGTGCACTTTAAGCTGGCTGGCCTCTaGAGACTCTTTTGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: RGQSTHLKVKALRFNVHFKLAGL*RLFCCA
Trigger: AGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTT...AAAGTGCACGTTAAACCTGAGCGCCTTTACCTTTAGATGAGTGCTTTGGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAAGCTGGCTGGCCTCTaGAGACTCTTTTGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMKLAGL*RLFCCA
Trigger: AGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACAAAGCCATGTACTGCTaGGGCTCCAAAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDKAMYC*GSKSCW
Trigger: CCAGCAGCTTTTGGAGCCTCAGCAGTACATGGCTTT...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATAAAGCCATGTACTGCTaGGGCTCCAAAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHKAMYC*GSKSCW
Trigger: CCAGCAGCTTTTGGAGCCTCAGCAGTACATGGCTTT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCAGGGAATCCTTTCTaGGACCGGTGGCAGCACATC +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPPGNPF*DRWQHI
Trigger: GATGTGCTGCCACCGGTCTCAGAAAGGATTCCCTGG...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGGGGCTACGCTCATTTaGACGGTGTATCTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALGATLI*TVYLGV
Trigger: AACACCTAGATACACCGTTCAAATGAGCGTAGCCCC...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGGGGCTACGCTCATTTaGACGGTGTATCTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMGATLI*TVYLGV
Trigger: AACACCTAGATACACCGTTCAAATGAGCGTAGCCCC...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTATGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALCSELF*MSWMVV
Trigger: CACCACCATCCAGGACATTCAGAAGAGTTCACTGCA...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTTGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NLWIPELLSPSLAFNSLLCSELF*MSWMVV
Trigger: CACCACCATCCAGGACATTCAGAAGAGTTCACTGCA...AAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR TCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGTGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMCSELF*MSWMVV
Trigger: CACCACCATCCAGGACATTCAGAAGAGTTCACTGCA...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCTGCAGCATCTGCAGTaGACTCTTCTGAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMLQHLQ*TLLNVL
Trigger: CAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAAGTGGTCTAGATAGATaGAACCAGCCACATTACCTT +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTSGLDR*NQPHYL
Trigger: AAGGTAATGTGGCTGGTTTCATCTATCTAGACCACT...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR GCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAGCCCTGGTGGATCGTTaGAGATGGTGCATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLALVDR*RWCILF
Trigger: AAAAAGAATGCACCATCTGCAACGATCCACCAGGGC...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTAGAGCACTGGCTCTTTaGTCCAAGAAGGCAACCATC +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTRALAL*SKKATI
Trigger: GATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCT...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGAGCACTGGCTCTTTaGTCCAAGAAGGCAACCATC +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMRALAL*SKKATI
Trigger: GATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAAGAGCACTGGCTCTTTaGTCCAAGAAGGCAACCATC +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALRALAL*SKKATI
Trigger: GATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCT...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAAGAGCACTGGCTCTTTaGTCCAAGAAGGCAACCATC +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFARALAL*SKKATI
Trigger: GATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCT...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATGGCTCACGCTGGCCCTaGCGCTTCAGGCACTCAGAC +
Preference number: 4 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYGSRWP*RFRHSD
Trigger: GTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCC...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTATTGCAAGCAATACTCTaGCCACATTTCGACGGAAGC +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLLQAIL*PHFDGS
Trigger: GCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAA...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTATTTTTCACGGCAGTTTaGGAACCCGGCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLFFTAV*EPGSNS
Trigger: AGAGTTAGAGCCGGGTTCGCAAACTGCCGTGAAAAA...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATTTTTTCACGGCAGTTTaGGAACCCGGCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: SPWNLWIPELLSPSLAFNFFTAV*EPGSNS
Trigger: AGAGTTAGAGCCGGGTTCGCAAACTGCCGTGAAAAA...ATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR GCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAAAGTCATGCGACACCTaGTTCTTCCAACTGGATGCC +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALKSCDT*FFQLDA
Trigger: GGCATCCAGTTGGAAGAAGCAGGTGTCGCATGACTT...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTGTCTCCAGGAAGTCATaGGACACCTGCTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTVSRKS*DTCFFQ
Trigger: TTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAGAC...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TGGCTCATGAGGTGTAAGAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATTCAGTCTCCAGGAAGTCATaGGACACCTGCTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: WLMRCKKLSLSPSLAFNSVSRKS*DTCFFQ
Trigger: TTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAGAC...TGAATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTCTTACACCTCATGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR GCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGTCTCCAGGAAGTCATaGGACACCTGCTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMVSRKS*DTCFFQ
Trigger: TTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAGAC...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGTCTCCAGGAAGTCATaGGACACCTGCTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALVSRKS*DTCFFQ
Trigger: TTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAGAC...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCAACCCAGCGAGAATCTaGTGGCCTGATATTGTAGTA +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGANPARI*WPDIVV
Trigger: TACTACAATATCAGGCCAGCAGATTCTCGCTGGGTT...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCTGGCCCATAGGGCAATaGCTGGCAATAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGWPIGQ*LAIGLG
Trigger: CCCAAGCCCTATTGCCAGGCATTGCCCTATGGGCCA...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAAAAATGCCTGAGCAATaGAGTCCTGATGATGTACAG +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTKMPEQ*SPDDVQ
Trigger: CTGTACATCATCAGGACTGCATTGCTCAGGCATTTT...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR GCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCGAGACCCTCATTGTCTaGACACAGGTCAGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAETLIV*TQVRAL
Trigger: AAGGGCCCTGACCTGTGTGCAGACAATGAGGGTCTC...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTCTTCTTCGCCCTGGTaGATCGTTGCAGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHSSSPW*IVADGA
Trigger: TGCACCATCTGCAACGATCCACCAGGGCGAAGAAGA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGCCTTCTTCTTCGCCCTaGTGGATCGTTGCAGATGGT +
Preference number: 4 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVPSSSP*WIVADG
Trigger: ACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGG...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTCCTTCTTCTTCGCCCTaGTGGATCGTTGCAGATGGT +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSPSSSP*WIVADG
Trigger: ACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGG...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGCCCAGATATCAAGTaGTCCTTCTTCTTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMSPDIK*SFFFAL
Trigger: CAGGGCGAAGAAGAAGGACCACTTGATATCTGGGCT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACAGCCCAGATATCAAGTaGTCCTTCTTCTTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYSPDIK*SFFFAL
Trigger: CAGGGCGAAGAAGAAGGACCACTTGATATCTGGGCT...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGGGCACACCTCTGGATTaGCCAGAAAACCTCACAATT +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGGTPLD*PENLTI
Trigger: AATTGTGAGGTTTTCTGGCCAATCCAGAGGTGTGCC...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACCTGCAGGCACACCTCTaGATTGGCCAGAAAACCTCA +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDLQAHL*IGQKTS
Trigger: TGAGGTTTTCTGGCCAATCCAGAGGTGTGCCTGCAG...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTATTCTTCACAAGCTCCTaGGGCAGAATAGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLFFTSS*GRIGLR
Trigger: TCTGAGTCCTATTCTGCCCCAGGAGCTTGTGAAGAA...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGGACTGGTTCGCTCTGTaGTTCACCAACCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGDWFAL*FTNLKI
Trigger: AATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTC...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GGTTGGCTCATGAGGTGTAAGAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATGACTGGTTCGCTCTGTaGTTCACCAACCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: GWLMRCKKLSLSPSLAFNDWFAL*FTNLKI
Trigger: AATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTC...ATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTCTTACACCTCATGAGCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR CCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGACTCAGACTCCAACTTaGCTACCATGTCAAGGACAC +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGTQTPT*LPCQGH
Trigger: GTGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGT...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCCTCCCAGGCTCACGCTaGCCCTGCCGCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCLPGSR*PCRFRH
Trigger: GTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAG...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAGCACCGTCCCAGGCCTaGTCCTCCTTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPAPSQA*SSLGEQ
Trigger: TTGTTCTCCTAAGGAGGACCAGGCCTGGGACGGTGC...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACTCTGCACTGTCTATGTaGAAACTCACTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYSALSM*KLTPAG
Trigger: GCCAGCAGGAGTGAGTTTCCACATAGACAGTGCAGA...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGCTCAGGTTTAACGTGCACTTTTCTGCACTGTCTATGTaGAAACTCACTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGQSTHLKVKALRFNVHFSALSM*KLTPAG
Trigger: GCCAGCAGGAGTGAGTTTCCACATAGACAGTGCAGA...AAAGTGCACGTTAAACCTGAGCGCCTTTACCTTTAGATGAGTGCTTTGGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGTCTGCACTGTCTATGTaGAAACTCACTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMSALSM*KLTPAG
Trigger: GCCAGCAGGAGTGAGTTTCCACATAGACAGTGCAGA...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAAATCAACAGCATCTGTaGGCAATTCAGAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLNQQHL*AIQRLG
Trigger: CCCAAGCCTCTGAATTGCCCACAGATGCTGTTGATT...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGCACAGGAGTTTAAAATaGAAGGCTGGTCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALHRSLK*KAGLCL
Trigger: TAGACAAAGACCAGCCTTCCATTTTAAACTCCTGTG...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTACATCTTCAAGCTGGCTaGCCTCTGAAGACTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLHLQAG*PLKTLL
Trigger: CAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATG...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGGCAGCATCTTCAAGCTaGCTGGCCTCTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVAASSS*LASEDS
Trigger: AGAGTCTTCAGAGGCCAGCCAGCTTGAAGATGCTGC...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACGCAGCATCTTCAAGCTaGCTGGCCTCTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDAASSS*LASEDS
Trigger: AGAGTCTTCAGAGGCCAGCCAGCTTGAAGATGCTGC...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGGCTGGCAGTACAAATaGCTCAGCAGACCCACTTTT +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYGWQYK*LSRPTF
Trigger: AAAAGTGGGTCTGCTGAGCCATTTGTACTGCCAGCC...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGGCTGGCAGTACAAATaGCTCAGCAGACCCACTTTT +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALGWQYK*LSRPTF
Trigger: AAAAGTGGGTCTGCTGAGCCATTTGTACTGCCAGCC...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTGGCTGGCAGTACAAATaGCTCAGCAGACCCACTTTT +
Preference number: 4 (lower is better)
Translates to: NLWIPELLSPSLAFNSLLGWQYK*LSRPTF
Trigger: AAAAGTGGGTCTGCTGAGCCATTTGTACTGCCAGCC...AAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGTTCCACAGAAGAGGCTaGCAGTACAAATGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMFHRRG*QYKWLS
Trigger: GCTGAGCCATTTGTACTGCCAGCCTCTTCTGTGGAA...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTATTCCACAGAAGAGGCTaGCAGTACAAATGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALFHRRG*QYKWLS
Trigger: GCTGAGCCATTTGTACTGCCAGCCTCTTCTGTGGAA...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGGCTCCAAAAGCTGCTaGATTTTAAACCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGGSKSC*ILNLVS
Trigger: GGAGACCAGGTTTAAAATCCAGCAGCTTTTGGAGCC...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GGTTGGCTCATGAGGTGTAAGAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATGGCTCCAAAAGCTGCTaGATTTTAAACCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GWLMRCKKLSLSPSLAFNGSKSC*ILNLVS
Trigger: GGAGACCAGGTTTAAAATCCAGCAGCTTTTGGAGCC...ATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTCTTACACCTCATGAGCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAATCCTCTCTATAGCGTaGATCTCGAACCCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALILSIA*ISNPAR
Trigger: TCTCGCTGGGTTCGAGATCCACGCTATAGAGAGGAT...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGTTGTTGCCTCTCACATaGACTTTAGTATTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALLLPLT*TLVFLF
Trigger: GAAGAGGAATACTAAAGTCCATGTGAGAGGCAACAA...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp GATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCCAGCGTGGGATTTGGAGCTTaGTGGTGGAGACTGACTTCA +
Preference number: 4 (lower is better)
Translates to: DWHDSTSDKSFRGLPCPSVGFGA*WWRLTS
Trigger: TGAAGTCAGTCTCCACCACCAAGCTCCAAATCCCAC...GCTGGGGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAACCTTGAGGAGTCCATaGAATTTGTGGATCCCGGAG +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFATLRSP*NLWIPE
Trigger: CTCCGGGATCCACAAATTCCATGGACTCCTCAAGGT...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR TCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAAAATGGCTTTCGAGATaGTGCTTTACCGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALKWLSR*CFTERG
Trigger: GCCTCTCTCGGTAAAGCATCATCTCGAAAGCCATTT...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTATTGCCTTCATCAGCCTaGGTGCTATTTGCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLLPSSA*VLFASN
Trigger: ATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAA...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCACAACGATCAGCTCTTaGAGGGCCACAATCCACAGA +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSTTISS*RATIHR
Trigger: TCTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGT...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACACAACGATCAGCTCTTaGAGGGCCACAATCCACAGA +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDTTISS*RATIHR
Trigger: TCTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGT...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGAAGCTGGCTGGCCTCTaGAGACTCTTTTGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVKLAGL*RLFCCA
Trigger: AGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTT...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR TCA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGCCAGGGAATCCTTTCTaGGACCGGTGGCAGCACATC +
Preference number: 4 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGPGNPF*DRWQHI
Trigger: GATGTGCTGCCACCGGTCTCAGAAAGGATTCCCTGG...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACGGGGCTACGCTCATTTaGACGGTGTATCTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDGATLI*TVYLGV
Trigger: AACACCTAGATACACCGTTCAAATGAGCGTAGCCCC...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCTGCAGCATCTGCAGTaGACTCTTCTGAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHLQHLQ*TLLNVL
Trigger: CAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACCTGCAGCATCTGCAGTaGACTCTTCTGAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDLQHLQ*TLLNVL
Trigger: CAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAG...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCCTCTTATGAAACCATaGATGAGAGATGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHPLMKP*MRDEAA
Trigger: TGCAGCTTCATCTCTCATTCATGGTTTCATAAGAGG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680658.1
CDS-3UTR GCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTTTCATAGGAGTTCTCTaGGTTTCCCTGCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTFIGVL*VSLLTS
Trigger: GGAAGTCAGCAGGGAAACGCAGAGAACTCCTATGAA...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGCCCTGGTGGATCGTTaGAGATGGTGCATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYALVDR*RWCILF
Trigger: AAAAAGAATGCACCATCTGCAACGATCCACCAGGGC...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCCCTGGTGGATCGTTaGAGATGGTGCATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAALVDR*RWCILF
Trigger: AAAAAGAATGCACCATCTGCAACGATCCACCAGGGC...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTGTGCTCAATGCCACATaGAAAAGGCTCAGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTVLNAT*KRLRLV
Trigger: TACCAACCTGAGCCTTTTGCATGTGGCATTGAGCAC...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGTGCTCAATGCCACATaGAAAAGGCTCAGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMVLNAT*KRLRLV
Trigger: TACCAACCTGAGCCTTTTGCATGTGGCATTGAGCAC...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTGTGCTCAATGCCACATaGAAAAGGCTCAGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: NLWIPELLSPSLAFNSLLVLNAT*KRLRLV
Trigger: TACCAACCTGAGCCTTTTGCATGTGGCATTGAGCAC...AAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR GCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACCAGAACAGTGCTCAATaGCACATGCAAAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYQNSAQ*HMQKAQ
Trigger: CTGAGCCTTTTGCATGTGGCATTGAGCACTGTTCTG...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATAGAGCACTGGCTCTTTaGTCCAAGAAGGCAACCATC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHRALAL*SKKATI
Trigger: GATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp ATGAGGTGTAAGAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTATAGGACTCAGACACTaGAGGCACACCTCTGGATTG +
Preference number: 4 (lower is better)
Translates to: MRCKKLSLSPSLAFNSLLIGLRH*RHTSGL
Trigger: CAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTAT...AAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTCTTACACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR GCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCATAGGACTCAGACACTaGAGGCACACCTCTGGATTG +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSIGLRH*RHTSGL
Trigger: CAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTAT...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGGCTCACGCTGGCCCTaGCGCTTCAGGCACTCAGAC +
Preference number: 4 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFGSRWP*RFRHSD
Trigger: GTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCC...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCATTGCAAGCAATACTCTaGCCACATTTCGACGGAAGC +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFALQAIL*PHFDGS
Trigger: GCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAA...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGTTGCAAGCAATACTCTaGCCACATTTCGACGGAAGC +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMLQAIL*PHFDGS
Trigger: GCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAA...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAAGCCTGAGTGCTATTTaGAAGCAATACTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALSLSAI*KQYSAH
Trigger: GTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCT...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTATTTTTCACGGCAGTTTaGGAACCCGGCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALFFTAV*EPGSNS
Trigger: AGAGTTAGAGCCGGGTTCGCAAACTGCCGTGAAAAA...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGCTCAGGTTTAACGTGCACTTTTTTTTCACGGCAGTTTaGGAACCCGGCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: RGQSTHLKVKALRFNVHFFFTAV*EPGSNS
Trigger: AGAGTTAGAGCCGGGTTCGCAAACTGCCGTGAAAAA...AAAGTGCACGTTAAACCTGAGCGCCTTTACCTTTAGATGAGTGCTTTGGCCCCT
48% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCATTTTTCACGGCAGTTTaGGAACCCGGCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAFFTAV*EPGSNS
Trigger: AGAGTTAGAGCCGGGTTCGCAAACTGCCGTGAAAAA...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGTCATGCGACACCTaGTTCTTCCAACTGGATGCC +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSKSCDT*FFQLDA
Trigger: GGCATCCAGTTGGAAGAAGCAGGTGTCGCATGACTT...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGAAGTCATGCGACACCTaGTTCTTCCAACTGGATGCC +
Preference number: 4 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVKSCDT*FFQLDA
Trigger: GGCATCCAGTTGGAAGAAGCAGGTGTCGCATGACTT...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATAAGTCATGCGACACCTaGTTCTTCCAACTGGATGCC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHKSCDT*FFQLDA
Trigger: GGCATCCAGTTGGAAGAAGCAGGTGTCGCATGACTT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTGTCTCCAGGAAGTCATaGGACACCTGCTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSVSRKS*DTCFFQ
Trigger: TTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAGAC...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTGCTTTCTTATGGATTaGCCGATTAAAGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHCFLMD*PIKAVA
Trigger: TGCCACAGCTTTAATCGGGCAATCCATAAGAAAGCA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCAAAATGCCTGAGCAATaGAGTCCTGATGATGTACAG +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAKMPEQ*SPDDVQ
Trigger: CTGTACATCATCAGGACTGCATTGCTCAGGCATTTT...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTTCGATTCAAATCCACTaGGATTCCAAGCGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTSIQIH*DSKRSW
Trigger: CCACGAACGCTTGGAATCGCAGTGGATTTGAATCGA...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440021.1
CDS-3UTR CCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGGGGTGCTCTTTCTTCTaGAGCTTCCAATATGGCTTT +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGGCSFF*SFQYGF
Trigger: AAAGCCATATTGGAAGCTCCAGAAGAAAGAGCACCC...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAGGGTGCTCTTTCTTCTaGAGCTTCCAATATGGCTTT +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLGCSFF*SFQYGF
Trigger: AAAGCCATATTGGAAGCTCCAGAAGAAAGAGCACCC...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTTTACAGCCTTTTGGTaGTTCATAGGAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHFTAFW*FIGVLC
Trigger: GCAGAGAACTCCTATGAACCACCAAAAGGCTGTAAA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACACTGCACAGAACATTTaGAGAAAGGATCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHTAQNI*RKDPKW
Trigger: CCATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGT...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TGGCTCTATGAATTTTCCATGAAAGGAGGAAGTAGGCTTTTCTCGTTGTGGGTGTCTTCTTCGCCCTGGTaGATCGTTGCAGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: WLYEFSMKGGSRLFSLWVSSSPW*IVADGA
Trigger: TGCACCATCTGCAACGATCCACCAGGGCGAAGAAGA...CACCCACAACGAGAAAAGCCTACTTCCTCCTTTCATGGAAAATTCATAGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCAGCCCAGATATCAAGTaGTCCTTCTTCTTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSSPDIK*SFFFAL
Trigger: CAGGGCGAAGAAGAAGGACCACTTGATATCTGGGCT...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATAGCCCAGATATCAAGTaGTCCTTCTTCTTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHSPDIK*SFFFAL
Trigger: CAGGGCGAAGAAGAAGGACCACTTGATATCTGGGCT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCATCCTGTTACTACACTaGTGGGATGCAAAGAATGCA +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAILLLH*WDAKNA
Trigger: TGCATTCTTTGCATCCCACCAGTGTAGTAACAGGAT...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGGCACACCTCTGGATTaGCCAGAAAACCTCACAATT +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALGTPLD*PENLTI
Trigger: AATTGTGAGGTTTTCTGGCCAATCCAGAGGTGTGCC...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCCTGCAGGCACACCTCTaGATTGGCCAGAAAACCTCA +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVALQAHL*IGQKTS
Trigger: TGAGGTTTTCTGGCCAATCCAGAGGTGTGCCTGCAG...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCATTCTTCACAAGCTCCTaGGGCAGAATAGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAFFTSS*GRIGLR
Trigger: TCTGAGTCCTATTCTGCCCCAGGAGCTTGTGAAGAA...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACTTCTTCACAAGCTCCTaGGGCAGAATAGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYFFTSS*GRIGLR
Trigger: TCTGAGTCCTATTCTGCCCCAGGAGCTTGTGAAGAA...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGACTGGTTCGCTCTGTaGTTCACCAACCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMDWFAL*FTNLKI
Trigger: AATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTC...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGACTGGTTCGCTCTGTaGTTCACCAACCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYDWFAL*FTNLKI
Trigger: AATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTC...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGACTCAGACTCCAACTTaGCTACCATGTCAAGGACAC +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMTQTPT*LPCQGH
Trigger: GTGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAACTCAGACTCCAACTTaGCTACCATGTCAAGGACAC +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALTQTPT*LPCQGH
Trigger: GTGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGT...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTCACTCCTGCTGGCAATaGGGGGCAGTCCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGHSCWQ*GAVLRS
Trigger: GCTTCTCAGGACTGCCCCCCATTGCCAGCAGGAGTG...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp GCATATTTTCTGGTGTTGAGAATGGTTGTTATCCTAAAGAGACCCTCATTGTCTCACTCCTGCTGGCAATaGGGGGCAGTCCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: AYFLVLRMVVILKRPSLSHSCWQ*GAVLRS
Trigger: GCTTCTCAGGACTGCCCCCCATTGCCAGCAGGAGTG...AGACAATGAGGGTCTCTTTAGGATAACAACCATTCTCAACACCAGAAAATATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp TTGAGAATGGTTGTTATCCTAAAGAGACCCTCATTGTCTGCACACAGGTCAGGGTCTGCACTGTCTATGTaGAAACTCACTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LRMVVILKRPSLSAHRSGSALSM*KLTPAG
Trigger: GCCAGCAGGAGTGAGTTTCCACATAGACAGTGCAGA...CCCTGACCTGTGTGCAGACAATGAGGGTCTCTTTAGGATAACAACCATTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAATCAACAGCATCTGTaGGCAATTCAGAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMNQQHL*AIQRLG
Trigger: CCCAAGCCTCTGAATTGCCCACAGATGCTGTTGATT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAAATCAACAGCATCTGTaGGCAATTCAGAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFANQQHL*AIQRLG
Trigger: CCCAAGCCTCTGAATTGCCCACAGATGCTGTTGATT...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACAATCAACAGCATCTGTaGGCAATTCAGAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYNQQHL*AIQRLG
Trigger: CCCAAGCCTCTGAATTGCCCACAGATGCTGTTGATT...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAAATCAACAGCATCTGTaGGCAATTCAGAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALNQQHL*AIQRLG
Trigger: CCCAAGCCTCTGAATTGCCCACAGATGCTGTTGATT...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACATTTAAAATGGAAGGCTaGTCTTTGTCTACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTFKMEG*SLSTLD
Trigger: GTCCAAGGTAGACAAAGACCAGCCTTCCATTTTAAA...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCATCTTCAAGCTGGCTaGCCTCTGAAGACTCTTTTG +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMHLQAG*PLKTLL
Trigger: CAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCGCAGCATCTTCAAGCTaGCTGGCCTCTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAAASSS*LASEDS
Trigger: AGAGTCTTCAGAGGCCAGCCAGCTTGAAGATGCTGC...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCGGCTGGCAGTACAAATaGCTCAGCAGACCCACTTTT +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSGWQYK*LSRPTF
Trigger: AAAAGTGGGTCTGCTGAGCCATTTGTACTGCCAGCC...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTGGCTGGCAGTACAAATaGCTCAGCAGACCCACTTTT +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSGWQYK*LSRPTF
Trigger: AAAAGTGGGTCTGCTGAGCCATTTGTACTGCCAGCC...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTTCCACAGAAGAGGCTaGCAGTACAAATGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHFHRRG*QYKWLS
Trigger: GCTGAGCCATTTGTACTGCCAGCCTCTTCTGTGGAA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAGAATGGTTGTTATCCTAAAGAGACCCTCATTGTCTGCACACAGGTCAGGGTTCCACAGAAGAGGCTaGCAGTACAAATGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LRMVVILKRPSLSAHRSGFHRRG*QYKWLS
Trigger: GCTGAGCCATTTGTACTGCCAGCCTCTTCTGTGGAA...CCCTGACCTGTGTGCAGACAATGAGGGTCTCTTTAGGATAACAACCATTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGCCTGCTTCTTCCAACTaGATGCCTCAAGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVPASSN*MPQALV
Trigger: TACCAGTGCTTGAGGCATCCAGTTGGAAGAAGCAGG...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACCCTGCTTCTTCCAACTaGATGCCTCAAGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDPASSN*MPQALV
Trigger: TACCAGTGCTTGAGGCATCCAGTTGGAAGAAGCAGG...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGGCTCCAAAAGCTGCTaGATTTTAAACCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMGSKSC*ILNLVS
Trigger: GGAGACCAGGTTTAAAATCCAGCAGCTTTTGGAGCC...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTTTACCATAATGTGGTaGGGCAGAAAAGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHFTIMW*GRKAMY
Trigger: GTACATGGCTTTTCTGCCCCACCACATTATGGTAAA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCCAGCGAGAATCTGCTaGCCTGATATTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMPARIC*PDIVVL
Trigger: GAGTACTACAATATCAGGCCAGCAGATTCTCGCTGG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTACCAGCGAGAATCTGCTaGCCTGATATTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALPARIC*PDIVVL
Trigger: GAGTACTACAATATCAGGCCAGCAGATTCTCGCTGG...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCATCCTCTCTATAGCGTaGATCTCGAACCCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSILSIA*ISNPAR
Trigger: TCTCGCTGGGTTCGAGATCCACGCTATAGAGAGGAT...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACATTGTTGCCTCTCACATaGACTTTAGTATTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTLLPLT*TLVFLF
Trigger: GAAGAGGAATACTAAAGTCCATGTGAGAGGCAACAA...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTATGTAAGAGTGGGATTTaGAGCTTGGTGGTGGAGACT +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALCKSGI*SLVVET
Trigger: AGTCTCCACCACCAAGCTCCAAATCCCACTCTTACA...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATAGTCCATGGAATTTGTaGATCCCGGAGTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHSPWNL*IPELLS
Trigger: GCTCAGCAACTCCGGGATCCACAAATTCCATGGACT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCTTCCTCCACTTACTGTaGTCCCAGCTACTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSFLHLL*SQLLRR
Trigger: CCTTCTGAGTAGCTGGGACCACAGTAAGTGGAGGAA...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679934.1
CDS-3UTR TCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCAAATGGCTTTCGAGATaGTGCTTTACCGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSKWLSR*CFTERG
Trigger: GCCTCTCTCGGTAAAGCATCATCTCGAAAGCCATTT...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAATGGCTTTCGAGATaGTGCTTTACCGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSKWLSR*CFTERG
Trigger: GCCTCTCTCGGTAAAGCATCATCTCGAAAGCCATTT...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGTTGCCTTCATCAGCCTaGGTGCTATTTGCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMLPSSA*VLFASN
Trigger: ATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAA...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCATTGCCTTCATCAGCCTaGGTGCTATTTGCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFALPSSA*VLFASN
Trigger: ATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAA...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACAACTGGGAATAGTCTaGCAAGTGCTGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPQLGIV*QVLTRW
Trigger: CCACCTGGTCAGCACTTGTCAGACTATTCCCAGTTG...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TATGTGATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCAACTGGGAATAGTCTaGCAAGTGCTGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YVIGMIAPLINHSEVCHAQLGIV*QVLTRW
Trigger: CCACCTGGTCAGCACTTGTCAGACTATTCCCAGTTG...GGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATCACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCAAGCTGGCTGGCCTCTaGAGACTCTTTTGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAKLAGL*RLFCCA
Trigger: AGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCAAAGCCATGTACTGCTaGGGCTCCAAAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGKAMYC*GSKSCW
Trigger: CCAGCAGCTTTTGGAGCCTCAGCAGTACATGGCTTT...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAAAAGCCATGTACTGCTaGGGCTCCAAAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPKAMYC*GSKSCW
Trigger: CCAGCAGCTTTTGGAGCCTCAGCAGTACATGGCTTT...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTCCAGGGAATCCTTTCTaGGACCGGTGGCAGCACATC +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGPGNPF*DRWQHI
Trigger: GATGTGCTGCCACCGGTCTCAGAAAGGATTCCCTGG...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGACCCGGGTTCAAACATaGGATGCCACTATAAACAAC +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMTRVQT*DATINN
Trigger: GTTGTTTATAGTGGCATCTCATGTTTGAACCCGGGT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACGGTTTTTGCTTCAGATaGTCAAGTAAGGGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDGFCFR*SSKGVP
Trigger: GGGCACACCCTTACTTGATCATCTGAAGCAAAAACC...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR TCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGCTCAGCTTCATGATTaGTTGCTGGGCTTCCATTTT +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMAQLHD*LLGFHF
Trigger: AAAATGGAAGCCCAGCAATCAATCATGAAGCTGAGC...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATAAGTGCTCAGCTTCATaGTTGATTGCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHKCSAS*LIAGLP
Trigger: TGGAAGCCCAGCAATCAATCATGAAGCTGAGCACTT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACTTCATAGGAGTTCTCTaGGTTTCCCTGCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDFIGVL*VSLLTS
Trigger: GGAAGTCAGCAGGGAAACGCAGAGAACTCCTATGAA...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACGCCCTGGTGGATCGTTaGAGATGGTGCATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDALVDR*RWCILF
Trigger: AAAAAGAATGCACCATCTGCAACGATCCACCAGGGC...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTGCCCTGGTGGATCGTTaGAGATGGTGCATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSALVDR*RWCILF
Trigger: AAAAAGAATGCACCATCTGCAACGATCCACCAGGGC...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACGTGCTCAATGCCACATaGAAAAGGCTCAGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDVLNAT*KRLRLV
Trigger: TACCAACCTGAGCCTTTTGCATGTGGCATTGAGCAC...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGTGCTCAATGCCACATaGAAAAGGCTCAGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHVLNAT*KRLRLV
Trigger: TACCAACCTGAGCCTTTTGCATGTGGCATTGAGCAC...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCCAGAACAGTGCTCAATaGCACATGCAAAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSQNSAQ*HMQKAQ
Trigger: CTGAGCCTTTTGCATGTGGCATTGAGCACTGTTCTG...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACCAGAACAGTGCTCAATaGCACATGCAAAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDQNSAQ*HMQKAQ
Trigger: CTGAGCCTTTTGCATGTGGCATTGAGCACTGTTCTG...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCAGAACAGTGCTCAATaGCACATGCAAAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHQNSAQ*HMQKAQ
Trigger: CTGAGCCTTTTGCATGTGGCATTGAGCACTGTTCTG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTCAGAACAGTGCTCAATaGCACATGCAAAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSQNSAQ*HMQKAQ
Trigger: CTGAGCCTTTTGCATGTGGCATTGAGCACTGTTCTG...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCAGAGCACTGGCTCTTTaGTCCAAGAAGGCAACCATC +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVARALAL*SKKATI
Trigger: GATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCATAGGACTCAGACACTaGAGGCACACCTCTGGATTG +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAIGLRH*RHTSGL
Trigger: CAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTAT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCTTGCAAGCAATACTCTaGCCACATTTCGACGGAAGC +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSLQAIL*PHFDGS
Trigger: GCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAA...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCAGCCTGAGTGCTATTTaGAAGCAATACTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSSLSAI*KQYSAH
Trigger: GTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCT...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAGCCTGAGTGCTATTTaGAAGCAATACTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSSLSAI*KQYSAH
Trigger: GTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCT...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGGGACACAAGCTCTCTaGTCATACAATCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMGTQAL*SYNQQH
Trigger: ATGCTGTTGATTGTATGAGCAGAGAGCTTGTGTCCC...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGGGACACAAGCTCTCTaGTCATACAATCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAGTQAL*SYNQQH
Trigger: ATGCTGTTGATTGTATGAGCAGAGAGCTTGTGTCCC...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCAAGTCATGCGACACCTaGTTCTTCCAACTGGATGCC +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAKSCDT*FFQLDA
Trigger: GGCATCCAGTTGGAAGAAGCAGGTGTCGCATGACTT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAACCCAGCGAGAATCTaGTGGCCTGATATTGTAGTA +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMNPARI*WPDIVV
Trigger: TACTACAATATCAGGCCAGCAGATTCTCGCTGGGTT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TGGCTCATGAGGTGTAAGAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATTCAAACCCAGCGAGAATCTaGTGGCCTGATATTGTAGTA +
Preference number: 4 (lower is better)
Translates to: WLMRCKKLSLSPSLAFNSNPARI*WPDIVV
Trigger: TACTACAATATCAGGCCAGCAGATTCTCGCTGGGTT...TGAATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTCTTACACCTCATGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR GCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACATCACATACTTTTTCTTaGACTGTTTGCAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTSHTFS*TVCKDP
Trigger: AGGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGA...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR GCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTTGCTTTCTTATGGATTaGCCGATTAAAGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGCFLMD*PIKAVA
Trigger: TGCCACAGCTTTAATCGGGCAATCCATAAGAAAGCA...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTATGCTTTCTTATGGATTaGCCGATTAAAGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLCFLMD*PIKAVA
Trigger: TGCCACAGCTTTAATCGGGCAATCCATAAGAAAGCA...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAAGCTTCAGTCCCTTTTaGTTTCTTATGGATTGCCCG +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALSFSPF*FLMDCP
Trigger: CGGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCT...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAAGCTTCAGTCCCTTTTaGTTTCTTATGGATTGCCCG +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFASFSPF*FLMDCP
Trigger: CGGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCT...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGCTCAGGTTTAACGTGCACTTTAGCTTCAGTCCCTTTTaGTTTCTTATGGATTGCCCG +
Preference number: 4 (lower is better)
Translates to: RGQSTHLKVKALRFNVHFSFSPF*FLMDCP
Trigger: CGGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCT...AAAGTGCACGTTAAACCTGAGCGCCTTTACCTTTAGATGAGTGCTTTGGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTTAGAGTTTAGAAAATaGCTGAGCAATGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGALEFRK*LSNAVL
Trigger: CAGGACTGCATTGCTCAGGCATTTTCTAAACTCTAA...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGGGTGCTCTTTCTTCTaGAGCTTCCAATATGGCTTT +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAGCSFF*SFQYGF
Trigger: AAAGCCATATTGGAAGCTCCAGAAGAAAGAGCACCC...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTTTACAGCCTTTTGGTaGTTCATAGGAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGFTAFW*FIGVLC
Trigger: GCAGAGAACTCCTATGAACCACCAAAAGGCTGTAAA...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTACTGCACAGAACATTTaGAGAAAGGATCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGTAQNI*RKDPKW
Trigger: CCATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGT...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGACTGCACAGAACATTTaGAGAAAGGATCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGTAQNI*RKDPKW
Trigger: CCATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGT...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCGTGGATCGTTGCAGATaGTGCATTCTTTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAVDRCR*CILFGF
Trigger: AAAACCAAAAAGAATGCACCATCTGCAACGATCCAC...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCCCTTCTTCTTCGCCCTaGTGGATCGTTGCAGATGGT +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGPSSSP*WIVADG
Trigger: ACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGG...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCAGCCCAGATATCAAGTaGTCCTTCTTCTTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVASPDIK*SFFFAL
Trigger: CAGGGCGAAGAAGAAGGACCACTTGATATCTGGGCT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCTGTTACTACACTGGTaGGATGCAAAGAATGCAATT +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHLLLHW*DAKNAI
Trigger: AATTGCATTCTTTGCATCCCACCAGTGTAGTAACAG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAATCCTGTTACTACACTaGTGGGATGCAAAGAATGCA +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLILLLH*WDAKNA
Trigger: TGCATTCTTTGCATCCCACCAGTGTAGTAACAGGAT...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACGGCACACCTCTGGATTaGCCAGAAAACCTCACAATT +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDGTPLD*PENLTI
Trigger: AATTGTGAGGTTTTCTGGCCAATCCAGAGGTGTGCC...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGCACACCTCTGGATTaGCCAGAAAACCTCACAATT +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHGTPLD*PENLTI
Trigger: AATTGTGAGGTTTTCTGGCCAATCCAGAGGTGTGCC...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACTGCAGGCACACCTCTaGATTGGCCAGAAAACCTCA +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPLQAHL*IGQKTS
Trigger: TGAGGTTTTCTGGCCAATCCAGAGGTGTGCCTGCAG...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTTCTTCACAAGCTCCTaGGGCAGAATAGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHFFTSS*GRIGLR
Trigger: TCTGAGTCCTATTCTGCCCCAGGAGCTTGTGAAGAA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGACTGGTTCGCTCTGTaGTTCACCAACCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHDWFAL*FTNLKI
Trigger: AATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTC...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTACTCAGACTCCAACTTaGCTACCATGTCAAGGACAC +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSTQTPT*LPCQGH
Trigger: GTGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGT...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTGCACCGTCCCAGGCCTaGTCCTCCTTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGAPSQA*SSLGEQ
Trigger: TTGTTCTCCTAAGGAGGACCAGGCCTGGGACGGTGC...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TTGAGAATGGTTGTTATCCTAAAGAGACCCTCATTGTCTGCACACAGGTCAGGGAATCAACAGCATCTGTaGGCAATTCAGAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LRMVVILKRPSLSAHRSGNQQHL*AIQRLG
Trigger: CCCAAGCCTCTGAATTGCCCACAGATGCTGTTGATT...CCCTGACCTGTGTGCAGACAATGAGGGTCTCTTTAGGATAACAACCATTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTTTAAAATGGAAGGCTaGTCTTTGTCTACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHFKMEG*SLSTLD
Trigger: GTCCAAGGTAGACAAAGACCAGCCTTCCATTTTAAA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCCACAGGAGTTTAAAATaGAAGGCTGGTCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAHRSLK*KAGLCL
Trigger: TAGACAAAGACCAGCCTTCCATTTTAAACTCCTGTG...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTTCCACAGAAGAGGCTaGCAGTACAAATGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAFHRRG*QYKWLS
Trigger: GCTGAGCCATTTGTACTGCCAGCCTCTTCTGTGGAA...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCCCTGCTTCTTCCAACTaGATGCCTCAAGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAPASSN*MPQALV
Trigger: TACCAGTGCTTGAGGCATCCAGTTGGAAGAAGCAGG...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTTTTACCATAATGTGGTaGGGCAGAAAAGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGFTIMW*GRKAMY
Trigger: GTACATGGCTTTTCTGCCCCACCACATTATGGTAAA...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCCAGCGAGAATCTGCTaGCCTGATATTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHPARIC*PDIVVL
Trigger: GAGTACTACAATATCAGGCCAGCAGATTCTCGCTGG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACCCAGCGAGAATCTGCTaGCCTGATATTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDPARIC*PDIVVL
Trigger: GAGTACTACAATATCAGGCCAGCAGATTCTCGCTGG...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCATCCTCTCTATAGCGTaGATCTCGAACCCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAILSIA*ISNPAR
Trigger: TCTCGCTGGGTTCGAGATCCACGCTATAGAGAGGAT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCCCTGGCAATAGGGCTTaGGGTGCCATCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCPGNRA*GAIGTG
Trigger: CCCTGTGCCGATGGCACCCCAAGCCCTATTGCCAGG...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTTGTTGCCTCTCACATaGACTTTAGTATTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGALLPLT*TLVFLF
Trigger: GAAGAGGAATACTAAAGTCCATGTGAGAGGCAACAA...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCAATTCACTCCTTCCTTaGGTCTGGACCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVANSLLP*VWTIHW
Trigger: CCAGTGGATGGTCCAGACCCAAGGAAGGAGTGAATT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp TGGCTCTATGAATTTTCCATGAAAGGAGGAAGTAGGCTTTTCTCGTTGTGGGTGTTTGGAGCTTGGTGGTaGAGACTGACTTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: WLYEFSMKGGSRLFSLWVFGAWW*RLTSAE
Trigger: CTCAGCTGAAGTCAGTCTCCACCACCAAGCTCCAAA...CACCCACAACGAGAAAAGCCTACTTCCTCCTTTCATGGAAAATTCATAGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TGGCTCTATGAATTTTCCATGAAAGGAGGAAGTAGGCTTTTCTCGTTGTGGGTGGGATTTGGAGCTTGGTaGTGGAGACTGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: WLYEFSMKGGSRLFSLWVGFGAW*WRLTSA
Trigger: AGCTGAAGTCAGTCTCCACCACCAAGCTCCAAATCC...CACCCACAACGAGAAAAGCCTACTTCCTCCTTTCATGGAAAATTCATAGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TGGCTCTATGAATTTTCCATGAAAGGAGGAAGTAGGCTTTTCTCGTTGTGGGTGGTGGGATTTGGAGCTTaGTGGTGGAGACTGACTTCA +
Preference number: 4 (lower is better)
Translates to: WLYEFSMKGGSRLFSLWVVGFGA*WWRLTS
Trigger: TGAAGTCAGTCTCCACCACCAAGCTCCAAATCCCAC...CACCCACAACGAGAAAAGCCTACTTCCTCCTTTCATGGAAAATTCATAGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACACATATCTTATGTGATTaGCATGATAGCACCTCTGAT +
Preference number: 4 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTHILCD*HDSTSD
Trigger: ATCAGAGGTGCTATCATGCCAATCACATAAGATATG...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680682.1
3UTR CAA 72 bp GTGTTGAGAATGGTTGTTATCCTAAAGAGACCCTCATaGTCTGCACACAGGTCAGGGCCCTTTGAAGTACGA +
Preference number: 4 (lower is better)
Translates to: VLRMVVILKRPS*SAHRSGPFEVR
Trigger: TCGTACTTCAAAGGGCCCTGACCTGTGTGCAGACAATGAGGGTCTCTTTAGGATAACAACCATTCTCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR TCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTTGCCTTCATCAGCCTaGGTGCTATTTGCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHLPSSA*VLFASN
Trigger: ATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCTTGCCTTCATCAGCCTaGGTGCTATTTGCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSLPSSA*VLFASN
Trigger: ATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAA...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTTTGCCTTCATCAGCCTaGGTGCTATTTGCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSLPSSA*VLFASN
Trigger: ATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAA...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAACAACGATCAGCTCTTaGAGGGCCACAATCCACAGA +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPTTISS*RATIHR
Trigger: TCTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGT...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGGGGCTACGCTCATTTaGACGGTGTATCTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGGATLI*TVYLGV
Trigger: AACACCTAGATACACCGTTCAAATGAGCGTAGCCCC...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCTAATGGTGGGGCTACGCTCATTTaGACGGTGTATCTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: VVDTLPPSPRCYIAFANGGATLI*TVYLGV
Trigger: AACACCTAGATACACCGTTCAAATGAGCGTAGCCCC...ACCATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATACCCGGGTTCAAACATaGGATGCCACTATAAACAAC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHTRVQT*DATINN
Trigger: GTTGTTTATAGTGGCATCTCATGTTTGAACCCGGGT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCATGCAGTGAACTCTTCTaGATGTCCTGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPCSELF*MSWMVV
Trigger: CACCACCATCCAGGACATTCAGAAGAGTTCACTGCA...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp TATGTGATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCTGCAGCATCTGCAGTaGACTCTTCTGAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: YVIGMIAPLINHSEVCHALQHLQ*TLLNVL
Trigger: CAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAG...GGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATCACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTACCTCTTATGAAACCATaGATGAGAGATGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALPLMKP*MRDEAE
Trigger: CTCAGCTTCATCTCTCATTCATGGTTTCATAAGAGG...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680682.1
CDS-3UTR TCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACTCAGAAGGCTGAGGTaGGAAGATCACTTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPLRRLR*EDHLSL
Trigger: TAGGCTCAAGTGATCTTCTCACCTCAGCCTTCTGAG...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679934.1
ENST00000681400.1
CDS-3UTR TCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCAGTACGAGCAGACCTTaGGGAGTCCATGGAATTTGT +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVASTSRP*GVHGIC
Trigger: ACAAATTCCATGGACTCCTCAAGGTCTGCTCGTACT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR GCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTTCTTCCCACTCATACTaGACAGAACATTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGSSHSY*TEHLEK
Trigger: TTTCTCCAAATGTTCTGTGCAGTATGAGTGGGAAGA...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACGATCGTTGCAGATGGTaGATTCTTTTTGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHDRCRW*ILFGFN
Trigger: GTTAAAACCAAAAAGAATGCACCATCTGCAACGATC...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCGATCGTTGCAGATGGTaGATTCTTTTTGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGADRCRW*ILFGFN
Trigger: GTTAAAACCAAAAAGAATGCACCATCTGCAACGATC...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TGGCTCTATGAATTTTCCATGAAAGGAGGAAGTAGGCTTTTCTCGTTGTGGGTGGCCCTGGTGGATCGTTaGAGATGGTGCATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: WLYEFSMKGGSRLFSLWVALVDR*RWCILF
Trigger: AAAAAGAATGCACCATCTGCAACGATCCACCAGGGC...CACCCACAACGAGAAAAGCCTACTTCCTCCTTTCATGGAAAATTCATAGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCGCCCTGGTGGATCGTTaGAGATGGTGCATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAALVDR*RWCILF
Trigger: AAAAAGAATGCACCATCTGCAACGATCCACCAGGGC...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCGTGCTCAATGCCACATaGAAAAGGCTCAGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAVLNAT*KRLRLV
Trigger: TACCAACCTGAGCCTTTTGCATGTGGCATTGAGCAC...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TGGCTCTATGAATTTTCCATGAAAGGAGGAAGTAGGCTTTTCTCGTTGTGGGTGCAGAACAGTGCTCAATaGCACATGCAAAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WLYEFSMKGGSRLFSLWVQNSAQ*HMQKAQ
Trigger: CTGAGCCTTTTGCATGTGGCATTGAGCACTGTTCTG...CACCCACAACGAGAAAAGCCTACTTCCTCCTTTCATGGAAAATTCATAGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAAGAGCACTGGCTCTTTaGTCCAAGAAGGCAACCATC +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPRALAL*SKKATI
Trigger: GATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCT...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAATAGGACTCAGACACTaGAGGCACACCTCTGGATTG +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPIGLRH*RHTSGL
Trigger: CAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTAT...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTACCACATCATATCTGTTaGTGTTTTTCACGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLPHHIC*CFSRQF
Trigger: AAACTGCCGTGAAAAACAGCAACAGATATGATGTGG...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGGACACAAGCTCTCTaGTCATACAATCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHGTQAL*SYNQQH
Trigger: ATGCTGTTGATTGTATGAGCAGAGAGCTTGTGTCCC...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACGGGACACAAGCTCTCTaGTCATACAATCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDGTQAL*SYNQQH
Trigger: ATGCTGTTGATTGTATGAGCAGAGAGCTTGTGTCCC...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATAACCCAGCGAGAATCTaGTGGCCTGATATTGTAGTA +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHNPARI*WPDIVV
Trigger: TACTACAATATCAGGCCAGCAGATTCTCGCTGGGTT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTTTTCTTGCACTGTTTaGAAGGATCCTCTCTATAGC +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGFSCTV*KDPLYS
Trigger: GCTATAGAGAGGATCCTTGCAAACAGTGCAAGAAAA...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTCACATACTTTTTCTTaGACTGTTTGCAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGASHTFS*TVCKDP
Trigger: AGGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGA...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTATGCTTTCTTATGGATTaGCCGATTAAAGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALCFLMD*PIKAVA
Trigger: TGCCACAGCTTTAATCGGGCAATCCATAAGAAAGCA...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACTGCTTTCTTATGGATTaGCCGATTAAAGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYCFLMD*PIKAVA
Trigger: TGCCACAGCTTTAATCGGGCAATCCATAAGAAAGCA...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAGCTTCAGTCCCTTTTaGTTTCTTATGGATTGCCCG +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSSFSPF*FLMDCP
Trigger: CGGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCT...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACAGCTTCAGTCCCTTTTaGTTTCTTATGGATTGCCCG +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDSFSPF*FLMDCP
Trigger: CGGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCT...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATAGCTTCAGTCCCTTTTaGTTTCTTATGGATTGCCCG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHSFSPF*FLMDCP
Trigger: CGGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTTTAGAGTTTAGAAAATaGCTGAGCAATGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGLEFRK*LSNAVL
Trigger: CAGGACTGCATTGCTCAGGCATTTTCTAAACTCTAA...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTATTAGAGTTTAGAAAATaGCTGAGCAATGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLLEFRK*LSNAVL
Trigger: CAGGACTGCATTGCTCAGGCATTTTCTAAACTCTAA...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCCAACACTATCCTAGCTaGATTGTGGTGATTATATTG +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAQHYPS*IVVIIL
Trigger: CAATATAATCACCACAATGCAGCTAGGATAGTGTTG...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCATGGGTTCTTCTACACTaGTGGGATCTCTGTTTTAAG +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAWVLLH*WDLCFK
Trigger: CTTAAAACAGAGATCCCAGCAGTGTAGAAGAACCCA...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCCTCCAAGTCCGAGGTaGTATATAGCTTTTGCTAAT +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMPPSPR*YIAFAN
Trigger: ATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCATTTACAGCCTTTTGGTaGTTCATAGGAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAFTAFW*FIGVLC
Trigger: GCAGAGAACTCCTATGAACCACCAAAAGGCTGTAAA...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTATCATTTACAGCCTTTTaGTGGTTCATAGGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLSFTAF*WFIGVL
Trigger: GAGAACTCCTATGAACCACCAAAAGGCTGTAAATGA...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACACTGCACAGAACATTTaGAGAAAGGATCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYTAQNI*RKDPKW
Trigger: CCATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGT...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATGTGGATCGTTGCAGATaGTGCATTCTTTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SPWNLWIPELLSPSLAFNVDRCR*CILFGF
Trigger: AAAACCAAAAAGAATGCACCATCTGCAACGATCCAC...ATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAGTGGATCGTTGCAGATaGTGCATTCTTTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLVDRCR*CILFGF
Trigger: AAAACCAAAAAGAATGCACCATCTGCAACGATCCAC...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGTCTTCTTCGCCCTGGTaGATCGTTGCAGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGSSSPW*IVADGA
Trigger: TGCACCATCTGCAACGATCCACCAGGGCGAAGAAGA...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCTGGGTTCAAGCAATTCTTCCATCTCAACCTCCCGAGTAGCTGGGATTATAGGCTGTTACTACACTGGTaGGATGCAAAGAATGCAATT +
Preference number: 4 (lower is better)
Translates to: PGFKQFFHLNLPSSWDYRLLLHW*DAKNAI
Trigger: AATTGCATTCTTTGCATCCCACCAGTGTAGTAACAG...CCTATAATCCCAGCTACTCGGGAGGTTGAGATGGAAGAATTGCTTGAACCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTATCCTGTTACTACACTaGTGGGATGCAAAGAATGCA +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTILLLH*WDAKNA
Trigger: TGCATTCTTTGCATCCCACCAGTGTAGTAACAGGAT...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGATCCTGTTACTACACTaGTGGGATGCAAAGAATGCA +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMILLLH*WDAKNA
Trigger: TGCATTCTTTGCATCCCACCAGTGTAGTAACAGGAT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCGGCACACCTCTGGATTaGCCAGAAAACCTCACAATT +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAGTPLD*PENLTI
Trigger: AATTGTGAGGTTTTCTGGCCAATCCAGAGGTGTGCC...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCACTCAGACTCCAACTTaGCTACCATGTCAAGGACAC +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVATQTPT*LPCQGH
Trigger: GTGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCTGGGTTCAAGCAATTCTTCCATCTCAACCTCCCGAGTAGCTGGGATTATAGGTTTAAAATGGAAGGCTaGTCTTTGTCTACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: PGFKQFFHLNLPSSWDYRFKMEG*SLSTLD
Trigger: GTCCAAGGTAGACAAAGACCAGCCTTCCATTTTAAA...CCTATAATCCCAGCTACTCGGGAGGTTGAGATGGAAGAATTGCTTGAACCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTTTAAAATGGAAGGCTaGTCTTTGTCTACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGFKMEG*SLSTLD
Trigger: GTCCAAGGTAGACAAAGACCAGCCTTCCATTTTAAA...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTCACAGGAGTTTAAAATaGAAGGCTGGTCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGHRSLK*KAGLCL
Trigger: TAGACAAAGACCAGCCTTCCATTTTAAACTCCTGTG...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGCACAGGAGTTTAAAATaGAAGGCTGGTCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGHRSLK*KAGLCL
Trigger: TAGACAAAGACCAGCCTTCCATTTTAAACTCCTGTG...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCCATCTTCAAGCTGGCTaGCCTCTGAAGACTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAHLQAG*PLKTLL
Trigger: CAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATG...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCTAATGGTGGCTGGCAGTACAAATaGCTCAGCAGACCCACTTTT +
Preference number: 4 (lower is better)
Translates to: VVDTLPPSPRCYIAFANGGWQYK*LSRPTF
Trigger: AAAAGTGGGTCTGCTGAGCCATTTGTACTGCCAGCC...ACCATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCTGCTTCTTCCAACTaGATGCCTCAAGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPPASSN*MPQALV
Trigger: TACCAGTGCTTGAGGCATCCAGTTGGAAGAAGCAGG...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCCCTGCTTCTTCCAACTaGATGCCTCAAGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGPASSN*MPQALV
Trigger: TACCAGTGCTTGAGGCATCCAGTTGGAAGAAGCAGG...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCGGCTCCAAAAGCTGCTaGATTTTAAACCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAGSKSC*ILNLVS
Trigger: GGAGACCAGGTTTAAAATCCAGCAGCTTTTGGAGCC...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATTTGTTGCCTCTCACATaGACTTTAGTATTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPWNLWIPELLSPSLAFNLLPLT*TLVFLF
Trigger: GAAGAGGAATACTAAAGTCCATGTGAGAGGCAACAA...ATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTGCTCAAAACATTTCTaGAACCCATTTTTGAGGACT +
Preference number: 4 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHCSKHF*NPFLRT
Trigger: AGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGCTCAAAACATTTCTaGAACCCATTTTTGAGGACT +
Preference number: 4 (lower is better)
Translates to: ATNINLTGSSIRGLRWGACSKHF*NPFLRT
Trigger: AGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCA...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATAAAGCTAGCAGAGGTTaGCTCATGAGGTGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHKASRG*LMRCKK
Trigger: CTTCTTACACCTCATGAGCCAACCTCTGCTAGCTTT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR CCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTCGAAACCCATTTGTTTaGCTAAAACGGAGTGACGTC +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSRNPFV*LKRSDV
Trigger: GACGTCACTCCGTTTTAGCCAAACAAATGGGTTTCG...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681400.1
CDS-3UTR TCA 90 bp GTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCTAATGGTAAATGGCTTTCGAGATaGTGCTTTACCGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VVDTLPPSPRCYIAFANGKWLSR*CFTERG
Trigger: GCCTCTCTCGGTAAAGCATCATCTCGAAAGCCATTT...ACCATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCCCCACAGGATTCACCTaGGTGTCAGGTGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCPTGFT*VSGASK
Trigger: CTTGGAGGCACCTGACACTCAGGTGAATCCTGTGGG...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp ACCATTATTTGGTATCCTTTGAGCAGGTTAGCCTTTCAACTATTTAGAGTTTCTCCCACAGGATTCACCTaGGTGTCAGGTGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TIIWYPLSRLAFQLFRVSPTGFT*VSGASK
Trigger: CTTGGAGGCACCTGACACTCAGGTGAATCCTGTGGG...AGAAACTCTAAATAGTTGAAAGGCTAACCTGCTCAAAGGATACCAAATAATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
CDS-3UTR TCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAGGTTTTTGCTTCAGATaGTCAAGTAAGGGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPGFCFR*SSKGVP
Trigger: GGGCACACCCTTACTTGATCATCTGAAGCAAAAACC...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR TCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAGAGACTGACTTCAGCTaGGAGATGCACAACAGTCAT +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPETDFS*EMHNSH
Trigger: ATGACTGTTGTGCATCTCTCAGCTGAAGTCAGTCTC...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAAAGTGCTCAGCTTCATaGTTGATTGCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPKCSAS*LIAGLP
Trigger: TGGAAGCCCAGCAATCAATCATGAAGCTGAGCACTT...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAACCATGAATGAGAGATaGAGCTGCAGCATCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPTMNER*SCSICS
Trigger: ACTGCAGATGCTGCAGCTTCATCTCTCATTCATGGT...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680658.1
CDS-3UTR GCA 90 bp GTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCTAATGGTTTCATAGGAGTTCTCTaGGTTTCCCTGCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: VVDTLPPSPRCYIAFANGFIGVL*VSLLTS
Trigger: GGAAGTCAGCAGGGAAACGCAGAGAACTCCTATGAA...ACCATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTATCTTCCCACTCATACTaGACAGAACATTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALSSHSY*TEHLEK
Trigger: TTTCTCCAAATGTTCTGTGCAGTATGAGTGGGAAGA...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTTCTTCCCACTCATACTaGACAGAACATTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NLWIPELLSPSLAFNSLLSSHSY*TEHLEK
Trigger: TTTCTCCAAATGTTCTGTGCAGTATGAGTGGGAAGA...AAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR GCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGTCTTCCCACTCATACTaGACAGAACATTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMSSHSY*TEHLEK
Trigger: TTTCTCCAAATGTTCTGTGCAGTATGAGTGGGAAGA...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATGATCGTTGCAGATGGTaGATTCTTTTTGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: SPWNLWIPELLSPSLAFNDRCRW*ILFGFN
Trigger: GTTAAAACCAAAAAGAATGCACCATCTGCAACGATC...ATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR GCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACAGAACAGTGCTCAATaGCACATGCAAAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPQNSAQ*HMQKAQ
Trigger: CTGAGCCTTTTGCATGTGGCATTGAGCACTGTTCTG...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCATTGCAAGCAATACTCTaGCCACATTTCGACGGAAGC +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPLQAIL*PHFDGS
Trigger: GCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAA...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCTTTTTCACGGCAGTTTaGGAACCCGGCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGFFTAV*EPGSNS
Trigger: AGAGTTAGAGCCGGGTTCGCAAACTGCCGTGAAAAA...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTACCACATCATATCTGTTaGTGTTTTTCACGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALPHHIC*CFSRQF
Trigger: AAACTGCCGTGAAAAACAGCAACAGATATGATGTGG...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCCACATCATATCTGTTaGTGTTTTTCACGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMPHHIC*CFSRQF
Trigger: AAACTGCCGTGAAAAACAGCAACAGATATGATGTGG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGGTCTCCAGGAAGTCATaGGACACCTGCTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGVSRKS*DTCFFQ
Trigger: TTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAGAC...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCAACCCAGCGAGAATCTaGTGGCCTGATATTGTAGTA +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVANPARI*WPDIVV
Trigger: TACTACAATATCAGGCCAGCAGATTCTCGCTGGGTT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGTTTTCTTGCACTGTTTaGAAGGATCCTCTCTATAGC +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMFSCTV*KDPLYS
Trigger: GCTATAGAGAGGATCCTTGCAAACAGTGCAAGAAAA...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTTCACATACTTTTTCTTaGACTGTTTGCAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: PATNINLTGSSIRGLRWGSHTFS*TVCKDP
Trigger: AGGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGA...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTATCACATACTTTTTCTTaGACTGTTTGCAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLSHTFS*TVCKDP
Trigger: AGGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGA...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTGCTTTCTTATGGATTaGCCGATTAAAGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHCFLMD*PIKAVA
Trigger: TGCCACAGCTTTAATCGGGCAATCCATAAGAAAGCA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACTGCTTTCTTATGGATTaGCCGATTAAAGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDCFLMD*PIKAVA
Trigger: TGCCACAGCTTTAATCGGGCAATCCATAAGAAAGCA...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCAGCTTCAGTCCCTTTTaGTTTCTTATGGATTGCCCG +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVASFSPF*FLMDCP
Trigger: CGGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAAATGCCTGAGCAATaGAGTCCTGATGATGTACAG +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSKMPEQ*SPDDVQ
Trigger: CTGTACATCATCAGGACTGCATTGCTCAGGCATTTT...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGAAAATGCCTGAGCAATaGAGTCCTGATGATGTACAG +
Preference number: 4 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVKMPEQ*SPDDVQ
Trigger: CTGTACATCATCAGGACTGCATTGCTCAGGCATTTT...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATAAAATGCCTGAGCAATaGAGTCCTGATGATGTACAG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHKMPEQ*SPDDVQ
Trigger: CTGTACATCATCAGGACTGCATTGCTCAGGCATTTT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACAAAATGCCTGAGCAATaGAGTCCTGATGATGTACAG +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDKMPEQ*SPDDVQ
Trigger: CTGTACATCATCAGGACTGCATTGCTCAGGCATTTT...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTATTAGAGTTTAGAAAATaGCTGAGCAATGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALLEFRK*LSNAVL
Trigger: CAGGACTGCATTGCTCAGGCATTTTCTAAACTCTAA...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGCAAATATGTTGCCAGTaGTCAAAACATTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGQICCQ*SKHFWN
Trigger: GTTCCAGAAATGTTTTGAGCACTGGCAACATATTTG...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACTGGGTTCTTCTACACTaGTGGGATCTCTGTTTTAAG +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDWVLLH*WDLCFK
Trigger: CTTAAAACAGAGATCCCAGCAGTGTAGAAGAACCCA...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCGGGTGCTCTTTCTTCTaGAGCTTCCAATATGGCTTT +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAGCSFF*SFQYGF
Trigger: AAAGCCATATTGGAAGCTCCAGAAGAAAGAGCACCC...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACTTTACAGCCTTTTGGTaGTTCATAGGAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDFTAFW*FIGVLC
Trigger: GCAGAGAACTCCTATGAACCACCAAAAGGCTGTAAA...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTTTACAGCCTTTTGGTaGTTCATAGGAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHFTAFW*FIGVLC
Trigger: GCAGAGAACTCCTATGAACCACCAAAAGGCTGTAAA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCATCATTTACAGCCTTTTaGTGGTTCATAGGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFASFTAF*WFIGVL
Trigger: GAGAACTCCTATGAACCACCAAAAGGCTGTAAATGA...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACTCATTTACAGCCTTTTaGTGGTTCATAGGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYSFTAF*WFIGVL
Trigger: GAGAACTCCTATGAACCACCAAAAGGCTGTAAATGA...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACACTGCACAGAACATTTaGAGAAAGGATCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDTAQNI*RKDPKW
Trigger: CCATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGT...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATACTGCACAGAACATTTaGAGAAAGGATCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHTAQNI*RKDPKW
Trigger: CCATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGTGGATCGTTGCAGATaGTGCATTCTTTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMVDRCR*CILFGF
Trigger: AAAACCAAAAAGAATGCACCATCTGCAACGATCCAC...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGTGGATCGTTGCAGATaGTGCATTCTTTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALVDRCR*CILFGF
Trigger: AAAACCAAAAAGAATGCACCATCTGCAACGATCCAC...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTCCTTCTTCTTCGCCCTaGTGGATCGTTGCAGATGGT +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGPSSSP*WIVADG
Trigger: ACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGG...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp ATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAGTCACAAACCTTCTTCTTCGCCCTaGTGGATCGTTGCAGATGGT +
Preference number: 4 (lower is better)
Translates to: IVLGRVAERSLFLSGSHKPSSSP*WIVADG
Trigger: ACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGG...TTTGTGACTACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCTGTTACTACACTGGTaGGATGCAAAGAATGCAATT +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMLLLHW*DAKNAI
Trigger: AATTGCATTCTTTGCATCCCACCAGTGTAGTAACAG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCACTGTTACTACACTGGTaGGATGCAAAGAATGCAATT +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFALLLHW*DAKNAI
Trigger: AATTGCATTCTTTGCATCCCACCAGTGTAGTAACAG...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTCTGTTACTACACTGGTaGGATGCAAAGAATGCAATT +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTLLLHW*DAKNAI
Trigger: AATTGCATTCTTTGCATCCCACCAGTGTAGTAACAG...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAGGCACACCTCTGGATTaGCCAGAAAACCTCACAATT +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPGTPLD*PENLTI
Trigger: AATTGTGAGGTTTTCTGGCCAATCCAGAGGTGTGCC...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCATTCTTCACAAGCTCCTaGGGCAGAATAGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPFFTSS*GRIGLR
Trigger: TCTGAGTCCTATTCTGCCCCAGGAGCTTGTGAAGAA...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGACTGGTTCGCTCTGTaGTTCACCAACCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGDWFAL*FTNLKI
Trigger: AATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTC...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTTTTAAAATGGAAGGCTaGTCTTTGTCTACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: NLWIPELLSPSLAFNSLLFKMEG*SLSTLD
Trigger: GTCCAAGGTAGACAAAGACCAGCCTTCCATTTTAAA...AAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCACACAGGAGTTTAAAATaGAAGGCTGGTCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAHRSLK*KAGLCL
Trigger: TAGACAAAGACCAGCCTTCCATTTTAAACTCCTGTG...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TGGCTCATGAGGTGTAAGAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATTCACACAGGAGTTTAAAATaGAAGGCTGGTCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: WLMRCKKLSLSPSLAFNSHRSLK*KAGLCL
Trigger: TAGACAAAGACCAGCCTTCCATTTTAAACTCCTGTG...TGAATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTCTTACACCTCATGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR CCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAGGCTCCAAAAGCTGCTaGATTTTAAACCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPGSKSC*ILNLVS
Trigger: GGAGACCAGGTTTAAAATCCAGCAGCTTTTGGAGCC...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTTTACCATAATGTGGTaGGGCAGAAAAGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHFTIMW*GRKAMY
Trigger: GTACATGGCTTTTCTGCCCCACCACATTATGGTAAA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACTTTACCATAATGTGGTaGGGCAGAAAAGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDFTIMW*GRKAMY
Trigger: GTACATGGCTTTTCTGCCCCACCACATTATGGTAAA...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TATGTGATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCCAGCGAGAATCTGCTaGCCTGATATTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: YVIGMIAPLINHSEVCHAPARIC*PDIVVL
Trigger: GAGTACTACAATATCAGGCCAGCAGATTCTCGCTGG...GGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATGCACATCCAATACCCTaGCCCATAGGGCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYAHPIP*PIGQCL
Trigger: CAGGCATTGCCCTATGGGCCAGGGTATTGGATGTGC...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTGCACATCCAATACCCTaGCCCATAGGGCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFAHPIP*PIGQCL
Trigger: CAGGCATTGCCCTATGGGCCAGGGTATTGGATGTGC...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTACCTTTTGCTTTCTTATaGATTGCCCGATTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALPFAFL*IARLKL
Trigger: CAGCTTTAATCGGGCAATCCATAAGAAAGCAAAAGG...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCACCTTTTGCTTTCTTATaGATTGCCCGATTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAPFAFL*IARLKL
Trigger: CAGCTTTAATCGGGCAATCCATAAGAAAGCAAAAGG...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTCCTTTTGCTTTCTTATaGATTGCCCGATTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTPFAFL*IARLKL
Trigger: CAGCTTTAATCGGGCAATCCATAAGAAAGCAAAAGG...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCATTGTTGCCTCTCACATaGACTTTAGTATTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFALLPLT*TLVFLF
Trigger: GAAGAGGAATACTAAAGTCCATGTGAGAGGCAACAA...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAACCTCCCGAGTAGCTaGGATTATAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGNLPSS*DYRHLP
Trigger: TGGCAGGTGCCTATAATCCCAGCTACTCGGGAGGTT...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TATGTGATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCGCAACCACCATCTCCTaGGTTCAAGCAATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: YVIGMIAPLINHSEVCHAATTIS*VQAILP
Trigger: TGGAAGAATTGCTTGAACCCAGGAGATGGTGGTTGC...GGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR CAA 72 bp GTGAGGGCCTTCAGGAAGATGGCATATTTTCTGGTGTaGAGAATGGTTGTTATCCTAAAGAGACCCTCATTG +
Preference number: 4 (lower is better)
Translates to: VRAFRKMAYFLV*RMVVILKRPSL
Trigger: CAATGAGGGTCTCTTTAGGATAACAACCATTCTCAACACCAGAAAATATGCCATCTTCCTGAAGGCCCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR TCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAACCCGGGTTCAAACATaGGATGCCACTATAAACAAC +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPTRVQT*DATINN
Trigger: GTTGTTTATAGTGGCATCTCATGTTTGAACCCGGGT...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCTAATGGTACCCGGGTTCAAACATaGGATGCCACTATAAACAAC +
Preference number: 4 (lower is better)
Translates to: VVDTLPPSPRCYIAFANGTRVQT*DATINN
Trigger: GTTGTTTATAGTGGCATCTCATGTTTGAACCCGGGT...ACCATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp ATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAGTCACAAACTGCAGCATCTGCAGTaGACTCTTCTGAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: IVLGRVAERSLFLSGSHKLQHLQ*TLLNVL
Trigger: CAGGACATTCAGAAGAGTTCACTGCAGATGCTGCAG...TTTGTGACTACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATATCTCTTTAATTCTCTaGTGGTTGAGAGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHISLIL*WLREVR
Trigger: CCTCACTTCTCTCAACCATCAGAGAATTAAAGAGAT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR GCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTGATCGTTGCAGATGGTaGATTCTTTTTGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTDRCRW*ILFGFN
Trigger: GTTAAAACCAAAAAGAATGCACCATCTGCAACGATC...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCCAGCGATCGTTGCAGATGGTaGATTCTTTTTGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: DWHDSTSDKSFRGLPCPSDRCRW*ILFGFN
Trigger: GTTAAAACCAAAAAGAATGCACCATCTGCAACGATC...GCTGGGGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGTTTTTCACGGCAGTTTaGGAACCCGGCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGFFTAV*EPGSNS
Trigger: AGAGTTAGAGCCGGGTTCGCAAACTGCCGTGAAAAA...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCCCACATCATATCTGTTaGTGTTTTTCACGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSPHHIC*CFSRQF
Trigger: AAACTGCCGTGAAAAACAGCAACAGATATGATGTGG...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCAACCCAGCGAGAATCTaGTGGCCTGATATTGTAGTA +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGNPARI*WPDIVV
Trigger: TACTACAATATCAGGCCAGCAGATTCTCGCTGGGTT...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACTTTTCTTGCACTGTTTaGAAGGATCCTCTCTATAGC +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDFSCTV*KDPLYS
Trigger: GCTATAGAGAGGATCCTTGCAAACAGTGCAAGAAAA...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTGAGAATGGTTGTTATCCTAAAGAGACCCTCATTGTCTGCACACAGGTCAGGGTTTTCTTGCACTGTTTaGAAGGATCCTCTCTATAGC +
Preference number: 4 (lower is better)
Translates to: LRMVVILKRPSLSAHRSGFSCTV*KDPLYS
Trigger: GCTATAGAGAGGATCCTTGCAAACAGTGCAAGAAAA...CCCTGACCTGTGTGCAGACAATGAGGGTCTCTTTAGGATAACAACCATTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTTTTCTTGCACTGTTTaGAAGGATCCTCTCTATAGC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHFSCTV*KDPLYS
Trigger: GCTATAGAGAGGATCCTTGCAAACAGTGCAAGAAAA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTTTTTCTTGCACTGTTTaGAAGGATCCTCTCTATAGC +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSFSCTV*KDPLYS
Trigger: GCTATAGAGAGGATCCTTGCAAACAGTGCAAGAAAA...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGTCACATACTTTTTCTTaGACTGTTTGCAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMSHTFS*TVCKDP
Trigger: AGGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGA...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAAGCTTCAGTCCCTTTTaGTTTCTTATGGATTGCCCG +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPSFSPF*FLMDCP
Trigger: CGGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCT...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCAAAATGCCTGAGCAATaGAGTCCTGATGATGTACAG +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAKMPEQ*SPDDVQ
Trigger: CTGTACATCATCAGGACTGCATTGCTCAGGCATTTT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACCAAATATGTTGCCAGTaGTCAAAACATTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYQICCQ*SKHFWN
Trigger: GTTCCAGAAATGTTTTGAGCACTGGCAACATATTTG...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAGGGTGCTCTTTCTTCTaGAGCTTCCAATATGGCTTT +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPGCSFF*SFQYGF
Trigger: AAAGCCATATTGGAAGCTCCAGAAGAAAGAGCACCC...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TGGCTCTATGAATTTTCCATGAAAGGAGGAAGTAGGCTTTTCTCGTTGTGGGTGTTTACAGCCTTTTGGTaGTTCATAGGAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: WLYEFSMKGGSRLFSLWVFTAFW*FIGVLC
Trigger: GCAGAGAACTCCTATGAACCACCAAAAGGCTGTAAA...CACCCACAACGAGAAAAGCCTACTTCCTCCTTTCATGGAAAATTCATAGAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TTGAGAATGGTTGTTATCCTAAAGAGACCCTCATTGTCTGCACACAGGTCAGGGTCATTTACAGCCTTTTaGTGGTTCATAGGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: LRMVVILKRPSLSAHRSGSFTAF*WFIGVL
Trigger: GAGAACTCCTATGAACCACCAAAAGGCTGTAAATGA...CCCTGACCTGTGTGCAGACAATGAGGGTCTCTTTAGGATAACAACCATTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCTCATTTACAGCCTTTTaGTGGTTCATAGGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSSFTAF*WFIGVL
Trigger: GAGAACTCCTATGAACCACCAAAAGGCTGTAAATGA...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTACACTTGATGTTATGTaGCTAGCTTTGCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTTLDVM*LALHVS
Trigger: TGAAACATGCAAAGCTAGCCACATAACATCAAGTGT...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAACACTTGATGTTATGTaGCTAGCTTTGCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALTLDVM*LALHVS
Trigger: TGAAACATGCAAAGCTAGCCACATAACATCAAGTGT...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACACACTTGATGTTATGTaGCTAGCTTTGCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYTLDVM*LALHVS
Trigger: TGAAACATGCAAAGCTAGCCACATAACATCAAGTGT...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAACACTTGATGTTATGTaGCTAGCTTTGCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFATLDVM*LALHVS
Trigger: TGAAACATGCAAAGCTAGCCACATAACATCAAGTGT...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTGTGGATCGTTGCAGATaGTGCATTCTTTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSVDRCR*CILFGF
Trigger: AAAACCAAAAAGAATGCACCATCTGCAACGATCCAC...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGCTGTTACTACACTGGTaGGATGCAAAGAATGCAATT +
Preference number: 4 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVLLLHW*DAKNAI
Trigger: AATTGCATTCTTTGCATCCCACCAGTGTAGTAACAG...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGGACTGGTTCGCTCTGTaGTTCACCAACCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGDWFAL*FTNLKI
Trigger: AATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTC...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCGTCAAGGACACGGACTaGTTCGCTCTGTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCVKDTD*FALWFT
Trigger: GGTGAACCACAGAGCGAACCAGTCCGTGTCCTTGAC...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGTCAAGGACACGGACTaGTTCGCTCTGTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFVKDTD*FALWFT
Trigger: GGTGAACCACAGAGCGAACCAGTCCGTGTCCTTGAC...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp ATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAGTCACAAATCTGCACTGTCTATGTaGAAACTCACTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: IVLGRVAERSLFLSGSHKSALSM*KLTPAG
Trigger: GCCAGCAGGAGTGAGTTTCCACATAGACAGTGCAGA...TTTGTGACTACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTTTAAAATGGAAGGCTaGTCTTTGTCTACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHFKMEG*SLSTLD
Trigger: GTCCAAGGTAGACAAAGACCAGCCTTCCATTTTAAA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCTTTAAAATGGAAGGCTaGTCTTTGTCTACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSFKMEG*SLSTLD
Trigger: GTCCAAGGTAGACAAAGACCAGCCTTCCATTTTAAA...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACTTTAAAATGGAAGGCTaGTCTTTGTCTACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDFKMEG*SLSTLD
Trigger: GTCCAAGGTAGACAAAGACCAGCCTTCCATTTTAAA...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACCACAGGAGTTTAAAATaGAAGGCTGGTCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDHRSLK*KAGLCL
Trigger: TAGACAAAGACCAGCCTTCCATTTTAAACTCCTGTG...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTCCTGCTTCTTCCAACTaGATGCCTCAAGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGPASSN*MPQALV
Trigger: TACCAGTGCTTGAGGCATCCAGTTGGAAGAAGCAGG...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTTTACCATAATGTGGTaGGGCAGAAAAGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAFTIMW*GRKAMY
Trigger: GTACATGGCTTTTCTGCCCCACCACATTATGGTAAA...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGCCTTTTGCTTTCTTATaGATTGCCCGATTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVPFAFL*IARLKL
Trigger: CAGCTTTAATCGGGCAATCCATAAGAAAGCAAAAGG...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACCCTTTTGCTTTCTTATaGATTGCCCGATTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDPFAFL*IARLKL
Trigger: CAGCTTTAATCGGGCAATCCATAAGAAAGCAAAAGG...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTTGTTGCCTCTCACATaGACTTTAGTATTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHLLPLT*TLVFLF
Trigger: GAAGAGGAATACTAAAGTCCATGTGAGAGGCAACAA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACTTGTTGCCTCTCACATaGACTTTAGTATTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDLLPLT*TLVFLF
Trigger: GAAGAGGAATACTAAAGTCCATGTGAGAGGCAACAA...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTTTGTTGCCTCTCACATaGACTTTAGTATTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSLLPLT*TLVFLF
Trigger: GAAGAGGAATACTAAAGTCCATGTGAGAGGCAACAA...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTTGCTCAAAACATTTCTaGAACCCATTTTTGAGGACT +
Preference number: 4 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTCSKHF*NPFLRT
Trigger: AGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCA...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCGATTCCAAGCGTTCGTaGAAGACAACTTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVADSKRS*KTTSFF
Trigger: GAAAAAGGAAGTTGTCTTCCACGAACGCTTGGAATC...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440021.1
CDS-3UTR CCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTGGATTTGGAGCTTGGTaGTGGAGACTGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGGFGAW*WRLTSA
Trigger: AGCTGAAGTCAGTCTCCACCACCAAGCTCCAAATCC...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp ACCATTATTTGGTATCCTTTGAGCAGGTTAGCCTTTCAACTATTTAGAGTTTCTCAACTGGGAATAGTCTaGCAAGTGCTGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TIIWYPLSRLAFQLFRVSQLGIV*QVLTRW
Trigger: CCACCTGGTCAGCACTTGTCAGACTATTCCCAGTTG...AGAAACTCTAAATAGTTGAAAGGCTAACCTGCTCAAAGGATACCAAATAATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
CDS-3UTR TCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCAAAGCCATGTACTGCTaGGGCTCCAAAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCKAMYC*GSKSCW
Trigger: CCAGCAGCTTTTGGAGCCTCAGCAGTACATGGCTTT...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTCAGATCAAGAGTGGCTaGTCTGCAGCATCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFQIKSG*SAASAV
Trigger: CACTGCAGATGCTGCAGATCAGCCACTCTTGATCTG...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680682.1
CDS-3UTR TCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCCCAAAAGAAATCCTATaGAAGAGTCCTAACAGGCAT +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAPKEIL*KSPNRH
Trigger: ATGCCTGTTAGGACTCTTTCATAGGATTTCTTTTGG...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTTTCATAGGAGTTCTCTaGGTTTCCCTGCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGFIGVL*VSLLTS
Trigger: GGAAGTCAGCAGGGAAACGCAGAGAACTCCTATGAA...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTTCCCACTCATACTaGACAGAACATTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVASSHSY*TEHLEK
Trigger: TTTCTCCAAATGTTCTGTGCAGTATGAGTGGGAAGA...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGATCGTTGCAGATGGTaGATTCTTTTTGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHDRCRW*ILFGFN
Trigger: GTTAAAACCAAAAAGAATGCACCATCTGCAACGATC...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp ATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAGTCACAAAAGCCTGAGTGCTATTTaGAAGCAATACTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: IVLGRVAERSLFLSGSHKSLSAI*KQYSAH
Trigger: GTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCT...TTTGTGACTACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCTCACATACTTTTTCTTaGACTGTTTGCAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSSHTFS*TVCKDP
Trigger: AGGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGA...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TCAGGTGAGGGCCTTCAGGAAGATGGCATATTTTCTGGTGTTGAGAATGGTTGTTCACATACTTTTTCTTaGACTGTTTGCAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: SGEGLQEDGIFSGVENGCSHTFS*TVCKDP
Trigger: AGGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGA...ACAACCATTCTCAACACCAGAAAATATGCCATCTTCCTGAAGGCCCTCACCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTCACATACTTTTTCTTaGACTGTTTGCAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHSHTFS*TVCKDP
Trigger: AGGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCATGCTTTCTTATGGATTaGCCGATTAAAGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPCFLMD*PIKAVA
Trigger: TGCCACAGCTTTAATCGGGCAATCCATAAGAAAGCA...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCAAATATGTTGCCAGTaGTCAAAACATTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHQICCQ*SKHFWN
Trigger: GTTCCAGAAATGTTTTGAGCACTGGCAACATATTTG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCAACACTATCCTAGCTaGATTGTGGTGATTATATTG +
Preference number: 4 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHQHYPS*IVVIIL
Trigger: CAATATAATCACCACAATGCAGCTAGGATAGTGTTG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAAGGCACCTGCCATCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPRHLPS*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGATGGCAGGTGCCT...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACACACTTGATGTTATGTaGCTAGCTTTGCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDTLDVM*LALHVS
Trigger: TGAAACATGCAAAGCTAGCCACATAACATCAAGTGT...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCTAATGGTACTGCACAGAACATTTaGAGAAAGGATCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: VVDTLPPSPRCYIAFANGTAQNI*RKDPKW
Trigger: CCATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGT...ACCATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTTCTTCTTCGCCCTGGTaGATCGTTGCAGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFSSSPW*IVADGA
Trigger: TGCACCATCTGCAACGATCCACCAGGGCGAAGAAGA...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCATCCTGTTACTACACTaGTGGGATGCAAAGAATGCA +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGILLLH*WDAKNA
Trigger: TGCATTCTTTGCATCCCACCAGTGTAGTAACAGGAT...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAATCCTGTTACTACACTaGTGGGATGCAAAGAATGCA +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPILLLH*WDAKNA
Trigger: TGCATTCTTTGCATCCCACCAGTGTAGTAACAGGAT...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTACTCAGACTCCAACTTaGCTACCATGTCAAGGACAC +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGTQTPT*LPCQGH
Trigger: GTGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGT...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCGCAGCATCTTCAAGCTaGCTGGCCTCTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCAASSS*LASEDS
Trigger: AGAGTCTTCAGAGGCCAGCCAGCTTGAAGATGCTGC...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATTTCCACAGAAGAGGCTaGCAGTACAAATGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYFHRRG*QYKWLS
Trigger: GCTGAGCCATTTGTACTGCCAGCCTCTTCTGTGGAA...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCCCTTTTGCTTTCTTATaGATTGCCCGATTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAPFAFL*IARLKL
Trigger: CAGCTTTAATCGGGCAATCCATAAGAAAGCAAAAGG...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACTGCTCAAAACATTTCTaGAACCCATTTTTGAGGACT +
Preference number: 4 (lower is better)
Translates to: SRCFAALETGPFVASHMDCSKHF*NPFLRT
Trigger: AGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCA...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTGCAACCACCATCTCCTaGGTTCAAGCAATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGATTIS*VQAILP
Trigger: TGGAAGAATTGCTTGAACCCAGGAGATGGTGGTTGC...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTGAGACTGACTTCAGCTaGGAGATGCACAACAGTCAT +
Preference number: 4 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFETDFS*EMHNSH
Trigger: ATGACTGTTGTGCATCTCTCAGCTGAAGTCAGTCTC...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATGTGCTCAATGCCACATaGAAAAGGCTCAGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYVLNAT*KRLRLV
Trigger: TACCAACCTGAGCCTTTTGCATGTGGCATTGAGCAC...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTATAGGACTCAGACACTaGAGGCACACCTCTGGATTG +
Preference number: 4 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFIGLRH*RHTSGL
Trigger: CAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTAT...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTAGCCTGAGTGCTATTTaGAAGCAATACTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFSLSAI*KQYSAH
Trigger: GTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCT...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp ATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAGTCACAAAGGGACACAAGCTCTCTaGTCATACAATCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: IVLGRVAERSLFLSGSHKGTQAL*SYNQQH
Trigger: ATGCTGTTGATTGTATGAGCAGAGAGCTTGTGTCCC...TTTGTGACTACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCGTCTCCAGGAAGTCATaGGACACCTGCTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCVSRKS*DTCFFQ
Trigger: TTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAGAC...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAACCCAGCGAGAATCTaGTGGCCTGATATTGTAGTA +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGNPARI*WPDIVV
Trigger: TACTACAATATCAGGCCAGCAGATTCTCGCTGGGTT...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp GTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCTAATGGTTTTTCTTGCACTGTTTaGAAGGATCCTCTCTATAGC +
Preference number: 4 (lower is better)
Translates to: VVDTLPPSPRCYIAFANGFSCTV*KDPLYS
Trigger: GCTATAGAGAGGATCCTTGCAAACAGTGCAAGAAAA...ACCATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCTTAGAGTTTAGAAAATaGCTGAGCAATGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGLEFRK*LSNAVL
Trigger: CAGGACTGCATTGCTCAGGCATTTTCTAAACTCTAA...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCCAACACTATCCTAGCTaGATTGTGGTGATTATATTG +
Preference number: 4 (lower is better)
Translates to: LNGVSRCFAALETGPFVAQHYPS*IVVIIL
Trigger: CAATATAATCACCACAATGCAGCTAGGATAGTGTTG...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681904.1
CDS-3UTR GCA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATGGGATTATAGGCACCTaGCATCATGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYGIIGT*HHAQLI
Trigger: AATTAGCTGGGCATGATGGCAGGTGCCTATAATCCC...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCATCATTTACAGCCTTTTaGTGGTTCATAGGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPSFTAF*WFIGVL
Trigger: GAGAACTCCTATGAACCACCAAAAGGCTGTAAATGA...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAGTGGATCGTTGCAGATaGTGCATTCTTTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPVDRCR*CILFGF
Trigger: AAAACCAAAAAGAATGCACCATCTGCAACGATCCAC...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCCTGTTACTACACTGGTaGGATGCAAAGAATGCAATT +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGLLLHW*DAKNAI
Trigger: AATTGCATTCTTTGCATCCCACCAGTGTAGTAACAG...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGATCCTGTTACTACACTaGTGGGATGCAAAGAATGCA +
Preference number: 4 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGILLLH*WDAKNA
Trigger: TGCATTCTTTGCATCCCACCAGTGTAGTAACAGGAT...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTGACTGGTTCGCTCTGTaGTTCACCAACCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFDWFAL*FTNLKI
Trigger: AATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTC...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCTCTGCACTGTCTATGTaGAAACTCACTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCSALSM*KLTPAG
Trigger: GCCAGCAGGAGTGAGTTTCCACATAGACAGTGCAGA...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCTTCCACAGAAGAGGCTaGCAGTACAAATGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCFHRRG*QYKWLS
Trigger: GCTGAGCCATTTGTACTGCCAGCCTCTTCTGTGGAA...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGTTTACCATAATGTGGTaGGGCAGAAAAGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGFTIMW*GRKAMY
Trigger: GTACATGGCTTTTCTGCCCCACCACATTATGGTAAA...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCCCTTTTGCTTTCTTATaGATTGCCCGATTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGPFAFL*IARLKL
Trigger: CAGCTTTAATCGGGCAATCCATAAGAAAGCAAAAGG...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTTTTGGAGCTTGGTGGTaGAGACTGACTTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFFGAWW*RLTSAE
Trigger: CTCAGCTGAAGTCAGTCTCCACCACCAAGCTCCAAA...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTTGTAAGAGTGGGATTTaGAGCTTGGTGGTGGAGACT +
Preference number: 4 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFCKSGI*SLVVET
Trigger: AGTCTCCACCACCAAGCTCCAAATCCCACTCTTACA...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp TATGTGATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCGATCGTTGCAGATGGTaGATTCTTTTTGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: YVIGMIAPLINHSEVCHADRCRW*ILFGFN
Trigger: GTTAAAACCAAAAAGAATGCACCATCTGCAACGATC...GGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATCACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCTTTTTCACGGCAGTTTaGGAACCCGGCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCFFTAV*EPGSNS
Trigger: AGAGTTAGAGCCGGGTTCGCAAACTGCCGTGAAAAA...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGCCACATCATATCTGTTaGTGTTTTTCACGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGPHHIC*CFSRQF
Trigger: AAACTGCCGTGAAAAACAGCAACAGATATGATGTGG...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCTCACATACTTTTTCTTaGACTGTTTGCAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGSHTFS*TVCKDP
Trigger: AGGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGA...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAAAATGCCTGAGCAATaGAGTCCTGATGATGTACAG +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGKMPEQ*SPDDVQ
Trigger: CTGTACATCATCAGGACTGCATTGCTCAGGCATTTT...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTACTGCACAGAACATTTaGAGAAAGGATCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGTAQNI*RKDPKW
Trigger: CCATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGT...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp ACCATTATTTGGTATCCTTTGAGCAGGTTAGCCTTTCAACTATTTAGAGTTTCTGGCACACCTCTGGATTaGCCAGAAAACCTCACAATT +
Preference number: 4 (lower is better)
Translates to: TIIWYPLSRLAFQLFRVSGTPLD*PENLTI
Trigger: AATTGTGAGGTTTTCTGGCCAATCCAGAGGTGTGCC...AGAAACTCTAAATAGTTGAAAGGCTAACCTGCTCAAAGGATACCAAATAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
CDS-3UTR CCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTTTCTTCACAAGCTCCTaGGGCAGAATAGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFFFTSS*GRIGLR
Trigger: TCTGAGTCCTATTCTGCCCCAGGAGCTTGTGAAGAA...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCAATCAACAGCATCTGTaGGCAATTCAGAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCNQQHL*AIQRLG
Trigger: CCCAAGCCTCTGAATTGCCCACAGATGCTGTTGATT...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp ACCATTATTTGGTATCCTTTGAGCAGGTTAGCCTTTCAACTATTTAGAGTTTCTCCAGCGAGAATCTGCTaGCCTGATATTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: TIIWYPLSRLAFQLFRVSPARIC*PDIVVL
Trigger: GAGTACTACAATATCAGGCCAGCAGATTCTCGCTGG...AGAAACTCTAAATAGTTGAAAGGCTAACCTGCTCAAAGGATACCAAATAATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
CDS-3UTR CCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCCCAGCGAGAATCTGCTaGCCTGATATTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCPARIC*PDIVVL
Trigger: GAGTACTACAATATCAGGCCAGCAGATTCTCGCTGG...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACATATCTTATGTGATTaGCATGATAGCACCTCTGAT +
Preference number: 4 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPHILCD*HDSTSD
Trigger: ATCAGAGGTGCTATCATGCCAATCACATAAGATATG...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCACCCGGGTTCAAACATaGGATGCCACTATAAACAAC +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCTRVQT*DATINN
Trigger: GTTGTTTATAGTGGCATCTCATGTTTGAACCCGGGT...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR TCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAATTCCTTGGCTCTATaGATTTTCCATGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGNSLAL*IFHERR
Trigger: CCTCCTTTCATGGAAAATTCATAGAGCCAAGGAATT...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTCCACATCATATCTGTTaGTGTTTTTCACGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGPHHIC*CFSRQF
Trigger: AAACTGCCGTGAAAAACAGCAACAGATATGATGTGG...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp ACCATTATTTGGTATCCTTTGAGCAGGTTAGCCTTTCAACTATTTAGAGTTTCTGGGACACAAGCTCTCTaGTCATACAATCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: TIIWYPLSRLAFQLFRVSGTQAL*SYNQQH
Trigger: ATGCTGTTGATTGTATGAGCAGAGAGCTTGTGTCCC...AGAAACTCTAAATAGTTGAAAGGCTAACCTGCTCAAAGGATACCAAATAATGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
CDS-3UTR GCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCGGGACACAAGCTCTCTaGTCATACAATCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCGTQAL*SYNQQH
Trigger: ATGCTGTTGATTGTATGAGCAGAGAGCTTGTGTCCC...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTAACCCAGCGAGAATCTaGTGGCCTGATATTGTAGTA +
Preference number: 4 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFNPARI*WPDIVV
Trigger: TACTACAATATCAGGCCAGCAGATTCTCGCTGGGTT...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp ACCATTATTTGGTATCCTTTGAGCAGGTTAGCCTTTCAACTATTTAGAGTTTCTAACCCAGCGAGAATCTaGTGGCCTGATATTGTAGTA +
Preference number: 4 (lower is better)
Translates to: TIIWYPLSRLAFQLFRVSNPARI*WPDIVV
Trigger: TACTACAATATCAGGCCAGCAGATTCTCGCTGGGTT...AGAAACTCTAAATAGTTGAAAGGCTAACCTGCTCAAAGGATACCAAATAATGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
CDS-3UTR GCA 90 bp ATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAGTCACAAATTTTCTTGCACTGTTTaGAAGGATCCTCTCTATAGC +
Preference number: 4 (lower is better)
Translates to: IVLGRVAERSLFLSGSHKFSCTV*KDPLYS
Trigger: GCTATAGAGAGGATCCTTGCAAACAGTGCAAGAAAA...TTTGTGACTACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATTGCTTTCTTATGGATTaGCCGATTAAAGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYCFLMD*PIKAVA
Trigger: TGCCACAGCTTTAATCGGGCAATCCATAAGAAAGCA...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTTTAGAGTTTAGAAAATaGCTGAGCAATGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGLEFRK*LSNAVL
Trigger: CAGGACTGCATTGCTCAGGCATTTTCTAAACTCTAA...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATCCTCCAAGTCCGAGGTaGTATATAGCTTTTGCTAAT +
Preference number: 4 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYPPSPR*YIAFAN
Trigger: ATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGG...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTTTCAGAGGTTTGCCATaGCCCAGCTTCTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFFRGLP*PSFFSH
Trigger: ATGAGAAAAGAAGCTGGGGCATGGCAAACCTCTGAA...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGGGTGCTCTTTCTTCTaGAGCTTCCAATATGGCTTT +
Preference number: 4 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFGCSFF*SFQYGF
Trigger: AAAGCCATATTGGAAGCTCCAGAAGAAAGAGCACCC...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp ACCATTATTTGGTATCCTTTGAGCAGGTTAGCCTTTCAACTATTTAGAGTTTCTGGGTGCTCTTTCTTCTaGAGCTTCCAATATGGCTTT +
Preference number: 4 (lower is better)
Translates to: TIIWYPLSRLAFQLFRVSGCSFF*SFQYGF
Trigger: AAAGCCATATTGGAAGCTCCAGAAGAAAGAGCACCC...AGAAACTCTAAATAGTTGAAAGGCTAACCTGCTCAAAGGATACCAAATAATGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
CDS-3UTR CCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTCACAGGAGTTTAAAATaGAAGGCTGGTCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGHRSLK*KAGLCL
Trigger: TAGACAAAGACCAGCCTTCCATTTTAAACTCCTGTG...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTTTTACCATAATGTGGTaGGGCAGAAAAGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFFTIMW*GRKAMY
Trigger: GTACATGGCTTTTCTGCCCCACCACATTATGGTAAA...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTTCTATGAATTTTCCATaGAAGGAGGAAGTAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGSMNFP*KEEVGF
Trigger: AAAGCCTACTTCCTCCTTTCATGGAAAATTCATAGA...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATTCTTCCCACTCATACTaGACAGAACATTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYSSHSY*TEHLEK
Trigger: TTTCTCCAAATGTTCTGTGCAGTATGAGTGGGAAGA...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp ACCATTATTTGGTATCCTTTGAGCAGGTTAGCCTTTCAACTATTTAGAGTTTCTTTTACAGCCTTTTGGTaGTTCATAGGAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TIIWYPLSRLAFQLFRVSFTAFW*FIGVLC
Trigger: GCAGAGAACTCCTATGAACCACCAAAAGGCTGTAAA...AGAAACTCTAAATAGTTGAAAGGCTAACCTGCTCAAAGGATACCAAATAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
CDS-3UTR CCA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTTCATTTACAGCCTTTTaGTGGTTCATAGGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFSFTAF*WFIGVL
Trigger: GAGAACTCCTATGAACCACCAAAAGGCTGTAAATGA...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTACACTTGATGTTATGTaGCTAGCTTTGCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGTLDVM*LALHVS
Trigger: TGAAACATGCAAAGCTAGCCACATAACATCAAGTGT...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATCCTTTTGCTTTCTTATaGATTGCCCGATTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYPFAFL*IARLKL
Trigger: CAGCTTTAATCGGGCAATCCATAAGAAAGCAAAAGG...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CCA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATTTGTTGCCTCTCACATaGACTTTAGTATTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYLLPLT*TLVFLF
Trigger: GAAGAGGAATACTAAAGTCCATGTGAGAGGCAACAA...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
3UTR CAA 72 bp GCTTCTTTTCTCATCATAATAATTGTAGTTGATACTTaGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: ASFLIIIIVVDT*PPSPRCYIAFA
Trigger: AGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAAAGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATTCTATGAATTTTCCATaGAAGGAGGAAGTAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYSMNFP*KEEVGF
Trigger: AAAGCCTACTTCCTCCTTTCATGGAAAATTCATAGA...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR TCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTCCAAAAGAAATCCTATaGAAGAGTCCTAACAGGCAT +
Preference number: 4 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFPKEIL*KSPNRH
Trigger: ATGCCTGTTAGGACTCTTTCATAGGATTTCTTTTGG...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR GCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCTCTTCCCACTCATACTaGACAGAACATTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCSSHSY*TEHLEK
Trigger: TTTCTCCAAATGTTCTGTGCAGTATGAGTGGGAAGA...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCCCACATCATATCTGTTaGTGTTTTTCACGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCPHHIC*CFSRQF
Trigger: AAACTGCCGTGAAAAACAGCAACAGATATGATGTGG...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCTTTAAAATGGAAGGCTaGTCTTTGTCTACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCFKMEG*SLSTLD
Trigger: GTCCAAGGTAGACAAAGACCAGCCTTCCATTTTAAA...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCGATCGTTGCAGATGGTaGATTCTTTTTGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCDRCRW*ILFGFN
Trigger: GTTAAAACCAAAAAGAATGCACCATCTGCAACGATC...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR GCA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCCAAATATGTTGCCAGTaGTCAAAACATTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCQICCQ*SKHFWN
Trigger: GTTCCAGAAATGTTTTGAGCACTGGCAACATATTTG...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CCA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTACACTTGATGTTATGTaGCTAGCTTTGCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFTLDVM*LALHVS
Trigger: TGAAACATGCAAAGCTAGCCACATAACATCAAGTGT...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS CCA 90 bp CAGGCTCACGCTGGCCCTGCCGCTTCAGGCACTCAGACTCCAACTTaGCTACCATGTCAAGGACACGGACTGGTTCGCTCTGTGGTTCAC +
Preference number: 5 (lower is better)
Translates to: QAHAGPAASGTQTPT*LPCQGHGLVRSVVH
Trigger: GTGAACCACAGAGCGAACCAGTCCGTGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 90 bp CGGAAGCTGTTATTCCTTGAGAGGCTCCCAGGCTCACGCTGGCCCTaGCGCTTCAGGCACTCAGACTCCAACTTGGCTACCATGTCAAGG +
Preference number: 5 (lower is better)
Translates to: RKLLFLERLPGSRWP*RFRHSDSNLATMSR
Trigger: CCTTGACATGGTAGCCAAGTTGGAGTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAGCCTCTCAAGGAATAACAGCTTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS TCA 90 bp TGCAAGCAATACTCTGCCCACATTTCGACGGAAGCTGTTATTCCTTaGGAGGCTCCCAGGCTCACGCTGGCCCTGCCGCTTCAGGCACTC +
Preference number: 5 (lower is better)
Translates to: CKQYSAHISTEAVIP*EAPRLTLALPLQAL
Trigger: GAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAGCCTCTCAAGGAATAACAGCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 90 bp TTTCGACGGAAGCTGTTATTCCTTGAGAGGCTCCCAGGCTCACGCTaGCCCTGCCGCTTCAGGCACTCAGACTCCAACTTGGCTACCATG +
Preference number: 5 (lower is better)
Translates to: FRRKLLFLERLPGSR*PCRFRHSDSNLATM
Trigger: CATGGTAGCCAAGTTGGAGTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAGCCTCTCAAGGAATAACAGCTTCCGTCGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp ACTCCTTCCTTGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCCCAGAGCACTGGCTCTTaGCTCCAAGAAGGCAACCAT +
Preference number: 5 (lower is better)
Translates to: TPSLGLDHPLGRGEVNHSQSTGS*LQEGNH
Trigger: ATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCTG...GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CAA 90 bp ACTCCTTCCTTGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCCGGGGGCTACGCTCATTaGAACGGTGTATCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: TPSLGLDHPLGRGEVNHSGGYAH*NGVSRC
Trigger: ACACCTAGATACACCGTTCAAATGAGCGTAGCCCCC...GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CAA 90 bp ACTCCTTCCTTGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCCCAATTCACTCCTTCCTaGGGTCTGGACCATCCACTG +
Preference number: 5 (lower is better)
Translates to: TPSLGLDHPLGRGEVNHSQFTPS*GLDHPL
Trigger: CAGTGGATGGTCCAGACCCAAGGAAGGAGTGAATTG...GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS TCA 90 bp ACCGTCCCAGGCCTGGTCCTCCTTAGGAGAACAACGATCAGCTCTTaGAGGGCCACAATCCACAGATACAGACCCCACAGGATTCACCTG +
Preference number: 5 (lower is better)
Translates to: TVPGLVLLRRTTISS*RATIHRYRPHRIHL
Trigger: CAGGTGAATCCTGTGGGGTCTGTATCTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGTTCTCCTAAGGAGGACCAGGCCTGGGACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp ACTCCTTCCTTGGGTCTGGACCATCCACTGGGCAGGGGAGAGGTGAACCACTCCCAGCTTCAGTCCCTTTaGCTTTCTTATGGATTGCCC +
Preference number: 5 (lower is better)
Translates to: TPSLGLDHPLGRGEVNHSQLQSL*LSYGLP
Trigger: GGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCTG...GGAGTGGTTCACCTCTCCCCTGCCCAGTGGATGGTCCAGACCCAAGGAAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS CCA 90 bp ACATCCAATACCCTGGCCCATAGGGCAATGCCTGGCAATAGGGCTTaGGGTGCCATCGGCACAGGGACACATCCCCTTTCACATACTTTT +
Preference number: 5 (lower is better)
Translates to: TSNTLAHRAMPGNRA*GAIGTGTHPLSHTF
Trigger: AAAAGTATGTGAAAGGGGATGTGTCCCTGTGCCGATGGCACCCCAAGCCCTATTGCCAGGCATTGCCCTATGGGCCAGGGTATTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGGAAGCTGTTATTCCTaGAGAGGCTCCCAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTGSCYS*RGSQAH
Trigger: GTGAGCCTGGGAGCCTCTCAAGGAATAACAGCTTCC...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CAA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGGGGGGCTACGCTCATTaGAACGGTGTATCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALGGYAH*NGVSRC
Trigger: ACACCTAGATACACCGTTCAAATGAGCGTAGCCCCC...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS GCA 90 bp TGTGGGTTCTTCACAAGCTCCTGGGGCAGAATAGGACTCAGACACTaGAGGCACACCTCTGGATTGGCCAGAAAACCTCACAATTGCAGG +
Preference number: 5 (lower is better)
Translates to: CGFFTSSWGRIGLRH*RHTSGLARKPHNCR
Trigger: CCTGCAATTGTGAGGTTTTCTGGCCAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTATTCTGCCCCAGGAGCTTGTGAAGAACCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCAAAGCCCCTGCATCTaGGGGCTAATGCGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMQSPCI*GLMRQL
Trigger: CAGCTGGCGCATTAGCCCCAAGATGCAGGGGCTTTG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681904.1
CDS CCA 90 bp AAGCTCCTGGGGCAGAATAGGACTCAGACACTGCAGGCACACCTCTaGATTGGCCAGAAAACCTCACAATTGCAGGTGAGTTTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: KLLGQNRTQTLQAHL*IGQKTSQLQVSLCS
Trigger: ACTGCACAAACTCACCTGCAATTGTGAGGTTTTCTGGCCAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTATTCTGCCCCAGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 90 bp ACCAACCTCAAGATTTCCCCTTTCTGTGGGTTCTTCACAAGCTCCTaGGGCAGAATAGGACTCAGACACTGCAGGCACACCTCTGGATTG +
Preference number: 5 (lower is better)
Translates to: TNLKISPFCGFFTSS*GRIGLRHCRHTSGL
Trigger: CAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTATTCTGCCCCAGGAGCTTGTGAAGAACCCACAGAAAGGGGAAATCTTGAGGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 90 bp CTGGTTCGCTCTGTGGTTCACCAACCTCAAGATTTCCCCTTTCTGTaGGTTCTTCACAAGCTCCTGGGGCAGAATAGGACTCAGACACTG +
Preference number: 5 (lower is better)
Translates to: LVRSVVHQPQDFPFL*VLHKLLGQNRTQTL
Trigger: CAGTGTCTGAGTCCTATTCTGCCCCAGGAGCTTGTGAAGAACCCACAGAAAGGGGAAATCTTGAGGTTGGTGAACCACAGAGCGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 90 bp CAGGCACTCAGACTCCAACTTGGCTACCATGTCAAGGACACGGACTaGTTCGCTCTGTGGTTCACCAACCTCAAGATTTCCCCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: QALRLQLGYHVKDTD*FALWFTNLKISPFC
Trigger: ACAGAAAGGGGAAATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTCCGTGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCGCCCTGGTGGATCGTaGCAGATGGTGCATTCTTTT +
Preference number: 5 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHRPGGS*QMVHSF
Trigger: AAAAGAATGCACCATCTGCAACGATCCACCAGGGCG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCCGCCCTGGTGGATCGTaGCAGATGGTGCATTCTTTT +
Preference number: 5 (lower is better)
Translates to: ATNINLTGSSIRGLRWGARPGGS*QMVHSF
Trigger: AAAAGAATGCACCATCTGCAACGATCCACCAGGGCG...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACACAGCCTGAGTGCTATTaGCAAGCAATACTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTQPECY*QAILCP
Trigger: TGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTG...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS GCA 90 bp GGTGCCATCGGCACAGGGACACATCCCCTTTCACATACTTTTTCTTaGACTGTTTGCAAGGATCCTCTCTATAGCGTGGATCTCGAACCC +
Preference number: 5 (lower is better)
Translates to: GAIGTGTHPLSHTFS*TVCKDPLYSVDLEP
Trigger: GGGTTCGAGATCCACGCTATAGAGAGGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGAAAGGGGATGTGTCCCTGTGCCGATGGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 90 bp CTCCAACTTGGCTACCATGTCAAGGACACGGACTGGTTCGCTCTGTaGTTCACCAACCTCAAGATTTCCCCTTTCTGTGGGTTCTTCACA +
Preference number: 5 (lower is better)
Translates to: LQLGYHVKDTDWFAL*FTNLKISPFCGFFT
Trigger: TGTGAAGAACCCACAGAAAGGGGAAATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTCCGTGTCCTTGACATGGTAGCCAAGTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGCAAAAGGCTCAGGTaGGTAGCACCTGCTGTTAAC +
Preference number: 5 (lower is better)
Translates to: ATNINLTGSSIRGLRWGACKRLR*VAPAVN
Trigger: GTTAACAGCAGGTGCTACCAACCTGAGCCTTTTGCA...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTGCAAAAGGCTCAGGTaGGTAGCACCTGCTGTTAAC +
Preference number: 5 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHCKRLR*VAPAVN
Trigger: GTTAACAGCAGGTGCTACCAACCTGAGCCTTTTGCA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTACAGAGCACTGGCTCTTaGCTCCAAGAAGGCAACCAT +
Preference number: 5 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLQSTGS*LQEGNH
Trigger: ATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCTG...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCACTCAGACTCCAACTaGGCTACCATGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHHSDSN*ATMSRT
Trigger: TGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGTG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGGAAGCTGTTATTCCTaGAGAGGCTCCCAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALGSCYS*RGSQAH
Trigger: GTGAGCCTGGGAGCCTCTCAAGGAATAACAGCTTCC...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGGAAGCTGTTATTCCTaGAGAGGCTCCCAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMGSCYS*RGSQAH
Trigger: GTGAGCCTGGGAGCCTCTCAAGGAATAACAGCTTCC...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCAGCCTGAGTGCTATTaGCAAGCAATACTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHQPECY*QAILCP
Trigger: TGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACATGGAAGGCTGGTCTTaGTCTACCTTGGACACAGTG +
Preference number: 5 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHMEGWS*STLDTV
Trigger: CACTGTGTCCAAGGTAGACAAAGACCAGCCTTCCAT...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGTGTGCCCTCTGCTCTaGGTCACTTTAACCCCTCAC +
Preference number: 5 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALVCPLL*VTLTPH
Trigger: GTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACAC...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS TCA 90 bp ATAACAAAGCCCCTGAGTTTCACAAACACTCAGCAGAGGGCGTGGTaGGGGAAGTTTCAACAATGTTCCTCCACTTACTGTGGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: ITKPLSFTNTQQRAW*GKFQQCSSTYCGPS
Trigger: GCTGGGACCACAGTAAGTGGAGGAACATTGTTGAAACTTCCCTCACCACGCCCTCTGCTGAGTGTTTGTGAAACTCAGGGGCTTTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679934.1
CDS GCA 90 bp GGCTCCAAAAGCTGCTGGATTTTAAACCTGGTCTCCAGGAAGTCATaGGACACCTGCTTCTTCCAACTGGATGCCTCAAGCACTGGTAAT +
Preference number: 5 (lower is better)
Translates to: GSKSCWILNLVSRKS*DTCFFQLDASSTGN
Trigger: ATTACCAGTGCTTGAGGCATCCAGTTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAGACCAGGTTTAAAATCCAGCAGCTTTTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCGCCCTGGTGGATCGTaGCAGATGGTGCATTCTTTT +
Preference number: 5 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMRPGGS*QMVHSF
Trigger: AAAAGAATGCACCATCTGCAACGATCCACCAGGGCG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCACAGAGCACTGGCTCTTaGCTCCAAGAAGGCAACCAT +
Preference number: 5 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAQSTGS*LQEGNH
Trigger: ATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCTG...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTACACTCAGACTCCAACTaGGCTACCATGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLHSDSN*ATMSRT
Trigger: TGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGTG...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGAAGCTGTTATTCCTaGAGAGGCTCCCAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHGSCYS*RGSQAH
Trigger: GTGAGCCTGGGAGCCTCTCAAGGAATAACAGCTTCC...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGGGAAGCTGTTATTCCTaGAGAGGCTCCCAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVGSCYS*RGSQAH
Trigger: GTGAGCCTGGGAGCCTCTCAAGGAATAACAGCTTCC...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CAA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCGGAAGCTGTTATTCCTaGAGAGGCTCCCAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSGSCYS*RGSQAH
Trigger: GTGAGCCTGGGAGCCTCTCAAGGAATAACAGCTTCC...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGATGGAAGGCTGGTCTTaGTCTACCTTGGACACAGTG +
Preference number: 5 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGMEGWS*STLDTV
Trigger: CACTGTGTCCAAGGTAGACAAAGACCAGCCTTCCAT...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCGCGCCCGGCCCCTTATGGGTTCTTCTACACTGCTGGGATCTCTGTTTTAAGTCTGAAGACTCTTTTGTaGTGCTTTCATTCAACTGGG +
Preference number: 5 (lower is better)
Translates to: PRPAPYGFFYTAGISVLSLKTLL*CFHSTG
Trigger: CCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAG...ACTTAAAACAGAGATCCCAGCAGTGTAGAAGAACCCATAAGGGGCCGGGCGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCCAGCTTCAGTCCCTTTaGCTTTCTTATGGATTGCCC +
Preference number: 5 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAQLQSL*LSYGLP
Trigger: GGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCTG...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGGGGGCTACGCTCATTaGAACGGTGTATCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMGGYAH*NGVSRC
Trigger: ACACCTAGATACACCGTTCAAATGAGCGTAGCCCCC...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCCAGCCAATTCACTCCTTCCTaGGGTCTGGACCATCCACTG +
Preference number: 5 (lower is better)
Translates to: DWHDSTSDKSFRGLPCPSQFTPS*GLDHPL
Trigger: CAGTGGATGGTCCAGACCCAAGGAAGGAGTGAATTG...GCTGGGGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680682.1
CDS-3UTR CAA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAAGTGGGATTTGGAGCTaGGTGGTGGAGACTGACTTC +
Preference number: 5 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFASGIWS*VVETDF
Trigger: GAAGTCAGTCTCCACCACCAAGCTCCAAATCCCACT...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGGAGTCCATGGAATTaGTGGATCCCGGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMRSPWN*WIPELL
Trigger: CAGCAACTCCGGGATCCACAAATTCCATGGACTCCT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CAA 90 bp AATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTCTAAAGAGACCCTCATaGTCTGCACACAGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: NLWIPELLSPSLAFNSLLLKRPS*SAHRSG
Trigger: CCCTGACCTGTGTGCAGACAATGAGGGTCTCTTTAG...AAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS GCA 90 bp AGCTGCTGGATTTTAAACCTGGTCTCCAGGAAGTCATGCGACACCTaGTTCTTCCAACTGGATGCCTCAAGCACTGGTAATGTACTTTCC +
Preference number: 5 (lower is better)
Translates to: SCWILNLVSRKSCDT*FFQLDASSTGNVLS
Trigger: GGAAAGTACATTACCAGTGCTTGAGGCATCCAGTTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAGACCAGGTTTAAAATCCAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 90 bp GGCACAGGGACACATCCCCTTTCACATACTTTTTCTTGCACTGTTTaGAAGGATCCTCTCTATAGCGTGGATCTCGAACCCAGCGAGAAT +
Preference number: 5 (lower is better)
Translates to: GTGTHPLSHTFSCTV*KDPLYSVDLEPSEN
Trigger: ATTCTCGCTGGGTTCGAGATCCACGCTATAGAGAGGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGAAAGGGGATGTGTCCCTGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCGCCCTGGTGGATCGTaGCAGATGGTGCATTCTTTT +
Preference number: 5 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHRPGGS*QMVHSF
Trigger: AAAAGAATGCACCATCTGCAACGATCCACCAGGGCG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACCGCCCTGGTGGATCGTaGCAGATGGTGCATTCTTTT +
Preference number: 5 (lower is better)
Translates to: SRCFAALETGPFVASHMDRPGGS*QMVHSF
Trigger: AAAAGAATGCACCATCTGCAACGATCCACCAGGGCG...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTCGCCCTGGTGGATCGTaGCAGATGGTGCATTCTTTT +
Preference number: 5 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSRPGGS*QMVHSF
Trigger: AAAAGAATGCACCATCTGCAACGATCCACCAGGGCG...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACTGCAAAAGGCTCAGGTaGGTAGCACCTGCTGTTAAC +
Preference number: 5 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYCKRLR*VAPAVN
Trigger: GTTAACAGCAGGTGCTACCAACCTGAGCCTTTTGCA...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGTGCAAAAGGCTCAGGTaGGTAGCACCTGCTGTTAAC +
Preference number: 5 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMCKRLR*VAPAVN
Trigger: GTTAACAGCAGGTGCTACCAACCTGAGCCTTTTGCA...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCCAGCTGCAAAAGGCTCAGGTaGGTAGCACCTGCTGTTAAC +
Preference number: 5 (lower is better)
Translates to: DWHDSTSDKSFRGLPCPSCKRLR*VAPAVN
Trigger: GTTAACAGCAGGTGCTACCAACCTGAGCCTTTTGCA...GCTGGGGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCAGAGCACTGGCTCTTaGCTCCAAGAAGGCAACCAT +
Preference number: 5 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHQSTGS*LQEGNH
Trigger: ATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCTG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCACACTCAGACTCCAACTaGGCTACCATGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAHSDSN*ATMSRT
Trigger: TGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGTG...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTCACTCAGACTCCAACTaGGCTACCATGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTHSDSN*ATMSRT
Trigger: TGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGTG...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACCAGCCTGAGTGCTATTaGCAAGCAATACTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYQPECY*QAILCP
Trigger: TGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTG...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTCAGCCTGAGTGCTATTaGCAAGCAATACTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTQPECY*QAILCP
Trigger: TGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTG...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCACAGCCTGAGTGCTATTaGCAAGCAATACTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAQPECY*QAILCP
Trigger: TGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTG...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACAACAACGATCAGCTCTaGAAGGGCCACAATCCACAG +
Preference number: 5 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYNNDQL*KGHNPQ
Trigger: CTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGTT...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAACAACGATCAGCTCTaGAAGGGCCACAATCCACAG +
Preference number: 5 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMNNDQL*KGHNPQ
Trigger: CTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGTT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CAAGTAAGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACATGGTCTTTGTCTACCTaGGACACAGTGATACTAATG +
Preference number: 5 (lower is better)
Translates to: QVRVCPLLLVTLTPHAVTWSLST*DTVILM
Trigger: CATTAGTATCACTGTGTCCAAGGTAGACAAAGACCA...TGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCTTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CAA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACATGGAAGGCTGGTCTTaGTCTACCTTGGACACAGTG +
Preference number: 5 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYMEGWS*STLDTV
Trigger: CACTGTGTCCAAGGTAGACAAAGACCAGCCTTCCAT...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGCCTCTGAAGACTCTTTaGTTGTGCTTTCATTCAACT +
Preference number: 5 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALPLKTL*LCFHST
Trigger: AGTTGAATGAAAGCACAACAAAAGAGTCTTCAGAGG...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CAA 90 bp GAGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAAAAACCGGTCCTTTTGTaGCCTCTCACATGGACTTTA +
Preference number: 5 (lower is better)
Translates to: ESMEFVDPGVAEPLLSFQKPVLL*PLTWTL
Trigger: TAAAGTCCATGTGAGAGGCAACAAAAGGACCGGTTT...TTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CAA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCAAACCGGTCCTTTTGTaGCCTCTCACATGGACTTTA +
Preference number: 5 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAKPVLL*PLTWTL
Trigger: TAAAGTCCATGTGAGAGGCAACAAAAGGACCGGTTT...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGGGGGCTACGCTCATTaGAACGGTGTATCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHGGYAH*NGVSRC
Trigger: ACACCTAGATACACCGTTCAAATGAGCGTAGCCCCC...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTGGGGGCTACGCTCATTaGAACGGTGTATCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSGGYAH*NGVSRC
Trigger: ACACCTAGATACACCGTTCAAATGAGCGTAGCCCCC...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TCAGGTGAGGGCCTTCAGGAAGATGGCATATTTTCTGGTGTTGAGAATGGTTGTGGGGGCTACGCTCATTaGAACGGTGTATCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: SGEGLQEDGIFSGVENGCGGYAH*NGVSRC
Trigger: ACACCTAGATACACCGTTCAAATGAGCGTAGCCCCC...ACAACCATTCTCAACACCAGAAAATATGCCATCTTCCTGAAGGCCCTCACCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CAA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACGGGGGCTACGCTCATTaGAACGGTGTATCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: SRCFAALETGPFVASHMDGGYAH*NGVSRC
Trigger: ACACCTAGATACACCGTTCAAATGAGCGTAGCCCCC...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCAATTCACTCCTTCCTaGGGTCTGGACCATCCACTG +
Preference number: 5 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHQFTPS*GLDHPL
Trigger: CAGTGGATGGTCCAGACCCAAGGAAGGAGTGAATTG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS GCA 90 bp TTGTTTTGCCTTCATCAGCCTGAGTGCTATTTGCAAGCAATACTCTaGCCACATTTCGACGGAAGCTGTTATTCCTTGAGAGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: LFCLHQPECYLQAIL*PHFDGSCYSLRGSQ
Trigger: CTGGGAGCCTCTCAAGGAATAACAGCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGGGTGTGCCCTCTGCTCTTGGTCACTTTAACCCCTCACGCAGTCACAGCTTTGGTTATGTGGCTAGCTTaGCATGTTTCATCATTTACA +
Preference number: 5 (lower is better)
Translates to: RVCPLLLVTLTPHAVTALVMWLA*HVSSFT
Trigger: TGTAAATGATGAAACATGCAAAGCTAGCCACATAAC...CAAAGCTGTGACTGCGTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CAA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTACTGCACAGAACATTaGGAGAAAGGATCCCAAATG +
Preference number: 5 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAYCTEH*EKGSQM
Trigger: CATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGTA...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTTGCAAAAGGCTCAGGTaGGTAGCACCTGCTGTTAAC +
Preference number: 5 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSCKRLR*VAPAVN
Trigger: GTTAACAGCAGGTGCTACCAACCTGAGCCTTTTGCA...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCCAGAGCACTGGCTCTTaGCTCCAAGAAGGCAACCAT +
Preference number: 5 (lower is better)
Translates to: LNGVSRCFAALETGPFVAQSTGS*LQEGNH
Trigger: ATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCTG...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTCAGAAAACCTCACAATaGCAGGTGAGTTTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: PATNINLTGSSIRGLRWGQKTSQ*QVSLCS
Trigger: ACTGCACAAACTCACCTGCAATTGTGAGGTTTTCTG...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGCAGAAAACCTCACAATaGCAGGTGAGTTTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGQKTSQ*QVSLCS
Trigger: ACTGCACAAACTCACCTGCAATTGTGAGGTTTTCTG...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTCACTCAGACTCCAACTaGGCTACCATGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSHSDSN*ATMSRT
Trigger: TGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGTG...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCACTCAGACTCCAACTaGGCTACCATGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHHSDSN*ATMSRT
Trigger: TGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGTG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACCACTCAGACTCCAACTaGGCTACCATGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: SRCFAALETGPFVASHMDHSDSN*ATMSRT
Trigger: TGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGTG...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCGGAAGCTGTTATTCCTaGAGAGGCTCCCAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGGSCYS*RGSQAH
Trigger: GTGAGCCTGGGAGCCTCTCAAGGAATAACAGCTTCC...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTCAGCCTGAGTGCTATTaGCAAGCAATACTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSQPECY*QAILCP
Trigger: TGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTG...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGCAGCCTGAGTGCTATTaGCAAGCAATACTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVQPECY*QAILCP
Trigger: TGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTG...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CAA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACAACAACGATCAGCTCTaGAAGGGCCACAATCCACAG +
Preference number: 5 (lower is better)
Translates to: SRCFAALETGPFVASHMDNNDQL*KGHNPQ
Trigger: CTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGTT...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp ATGAGGTGTAAGAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATTCACTCCTTAACAACGATCAGCTCTaGAAGGGCCACAATCCACAG +
Preference number: 5 (lower is better)
Translates to: MRCKKLSLSPSLAFNSLLNNDQL*KGHNPQ
Trigger: CTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGTT...AAGGAGTGAATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTCTTACACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR CAA 90 bp TTGAGAATGGTTGTTATCCTAAAGAGACCCTCATTGTCTGCACACAGGTCAGGGAACAACGATCAGCTCTaGAAGGGCCACAATCCACAG +
Preference number: 5 (lower is better)
Translates to: LRMVVILKRPSLSAHRSGNNDQL*KGHNPQ
Trigger: CTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGTT...CCCTGACCTGTGTGCAGACAATGAGGGTCTCTTTAGGATAACAACCATTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CAA 90 bp GCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGGTCTTTGTCTACCTaGGACACAGTGATACTAATG +
Preference number: 5 (lower is better)
Translates to: ATNINLTGSSIRGLRWGAWSLST*DTVILM
Trigger: CATTAGTATCACTGTGTCCAAGGTAGACAAAGACCA...GGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTGGTCTTTGTCTACCTaGGACACAGTGATACTAATG +
Preference number: 5 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHWSLST*DTVILM
Trigger: CATTAGTATCACTGTGTCCAAGGTAGACAAAGACCA...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCATGGAAGGCTGGTCTTaGTCTACCTTGGACACAGTG +
Preference number: 5 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSMEGWS*STLDTV
Trigger: CACTGTGTCCAAGGTAGACAAAGACCAGCCTTCCAT...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGATGGAAGGCTGGTCTTaGTCTACCTTGGACACAGTG +
Preference number: 5 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVMEGWS*STLDTV
Trigger: CACTGTGTCCAAGGTAGACAAAGACCAGCCTTCCAT...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CAA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACATGGAAGGCTGGTCTTaGTCTACCTTGGACACAGTG +
Preference number: 5 (lower is better)
Translates to: SRCFAALETGPFVASHMDMEGWS*STLDTV
Trigger: CACTGTGTCCAAGGTAGACAAAGACCAGCCTTCCAT...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTCAGCTTCAGTCCCTTTaGCTTTCTTATGGATTGCCC +
Preference number: 5 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTQLQSL*LSYGLP
Trigger: GGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCTG...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCAGCTTCAGTCCCTTTaGCTTTCTTATGGATTGCCC +
Preference number: 5 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMQLQSL*LSYGLP
Trigger: GGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCTG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCTAATGGTGTGTGCCCTCTGCTCTaGGTCACTTTAACCCCTCAC +
Preference number: 5 (lower is better)
Translates to: VVDTLPPSPRCYIAFANGVCPLL*VTLTPH
Trigger: GTGAGGGGTTAAAGTGACCAAGAGCAGAGGGCACAC...ACCATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680682.1
CDS-3UTR CAA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAAGTACGAGCAGACCTaGAGGAGTCCATGGAATTTG +
Preference number: 5 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMKYEQT*RSPWNL
Trigger: CAAATTCCATGGACTCCTCAAGGTCTGCTCGTACTT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS GCA 90 bp AGCCCAGATATCAAGTGGTCCTTCTTCTTCGCCCTGGTGGATCGTTaGAGATGGTGCATTCTTTTTGGTTTTAACATTCAAGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: SPDIKWSFFFALVDR*RWCILFGFNIQAAL
Trigger: GAGAGCAGCTTGAATGTTAAAACCAAAAAGAATGCACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGGACCACTTGATATCTGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000554940.1
ENST00000555087.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 90 bp AAGGTAACCCAACGAGTTCATCTGTCATTTCCACATCATATCTGTTaGTGTTTTTCACGGCAGTTTGCGAACCCGGCTCTAACTCTGCAC +
Preference number: 5 (lower is better)
Translates to: KVTQRVHLSFPHHIC*CFSRQFANPALTLH
Trigger: GTGCAGAGTTAGAGCCGGGTTCGCAAACTGCCGTGAAAAACAGCAACAGATATGATGTGGAAATGACAGATGAACTCGTTGGGTTACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 90 bp CCTCTCACATGGACTTTAGTATTCCTCTTCAGCTTCAGTCCCTTTTaGTTTCTTATGGATTGCCCGATTAAAGCTGTGGCAGGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: PLTWTLVFLFSFSPF*FLMDCPIKAVAGRN
Trigger: GTTCCTGCCTGCCACAGCTTTAATCGGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCTGAAGAGGAATACTAAAGTCCATGTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 90 bp TTTTTCCTTGGTATTTCCAGGTTTCACAACAGCCCAGATATCAAGTaGTCCTTCTTCTTCGCCCTGGTGGATCGTTGCAGATGGTGCATT +
Preference number: 5 (lower is better)
Translates to: FFLGISRFHNSPDIK*SFFFALVDRCRWCI
Trigger: AATGCACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGGACCACTTGATATCTGGGCTGTTGTGAAACCTGGAAATACCAAGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000554940.1
ENST00000555087.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTTACTGCACAGAACATTaGGAGAAAGGATCCCAAATG +
Preference number: 5 (lower is better)
Translates to: PATNINLTGSSIRGLRWGYCTEH*EKGSQM
Trigger: CATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGTA...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTGCAAAAGGCTCAGGTaGGTAGCACCTGCTGTTAAC +
Preference number: 5 (lower is better)
Translates to: LNGVSRCFAALETGPFVACKRLR*VAPAVN
Trigger: GTTAACAGCAGGTGCTACCAACCTGAGCCTTTTGCA...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCCAGAGCACTGGCTCTTaGCTCCAAGAAGGCAACCAT +
Preference number: 5 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGQSTGS*LQEGNH
Trigger: ATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCTG...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACAGAGCACTGGCTCTTaGCTCCAAGAAGGCAACCAT +
Preference number: 5 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPQSTGS*LQEGNH
Trigger: ATGGTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCTG...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GGGCATGAAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACCAGAAAACCTCACAATaGCAGGTGAGTTTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: GHEIHLQPQTSISQDQAYQKTSQ*QVSLCS
Trigger: ACTGCACAAACTCACCTGCAATTGTGAGGTTTTCTG...GTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTTCATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTACAGAAAACCTCACAATaGCAGGTGAGTTTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALQKTSQ*QVSLCS
Trigger: ACTGCACAAACTCACCTGCAATTGTGAGGTTTTCTG...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCAGAAAACCTCACAATaGCAGGTGAGTTTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMQKTSQ*QVSLCS
Trigger: ACTGCACAAACTCACCTGCAATTGTGAGGTTTTCTG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCCACTCAGACTCCAACTaGGCTACCATGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: LNGVSRCFAALETGPFVAHSDSN*ATMSRT
Trigger: TGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGTG...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCAACAACGATCAGCTCTaGAAGGGCCACAATCCACAG +
Preference number: 5 (lower is better)
Translates to: LNGVSRCFAALETGPFVANNDQL*KGHNPQ
Trigger: CTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGTT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGGTCTTTGTCTACCTaGGACACAGTGATACTAATG +
Preference number: 5 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGWSLST*DTVILM
Trigger: CATTAGTATCACTGTGTCCAAGGTAGACAAAGACCA...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCATGGAAGGCTGGTCTTaGTCTACCTTGGACACAGTG +
Preference number: 5 (lower is better)
Translates to: LNGVSRCFAALETGPFVAMEGWS*STLDTV
Trigger: CACTGTGTCCAAGGTAGACAAAGACCAGCCTTCCAT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACCCTCTGAAGACTCTTTaGTTGTGCTTTCATTCAACT +
Preference number: 5 (lower is better)
Translates to: SQLNPTVGYHPGSNMRCHPLKTL*LCFHST
Trigger: AGTTGAATGAAAGCACAACAAAAGAGTCTTCAGAGG...GTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCAGCTTCAGTCCCTTTaGCTTTCTTATGGATTGCCC +
Preference number: 5 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHQLQSL*LSYGLP
Trigger: GGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCTG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTGAGAATGGTTGTTATCCTAAAGAGACCCTCATTGTCTGCACACAGGTCAGGGCAGCTTCAGTCCCTTTaGCTTTCTTATGGATTGCCC +
Preference number: 5 (lower is better)
Translates to: LRMVVILKRPSLSAHRSGQLQSL*LSYGLP
Trigger: GGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCTG...CCCTGACCTGTGTGCAGACAATGAGGGTCTCTTTAGGATAACAACCATTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CAA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCCAGCTTCAGTCCCTTTaGCTTTCTTATGGATTGCCC +
Preference number: 5 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSQLQSL*LSYGLP
Trigger: GGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCTG...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAAACCGGTCCTTTTGTaGCCTCTCACATGGACTTTA +
Preference number: 5 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMKPVLL*PLTWTL
Trigger: TAAAGTCCATGTGAGAGGCAACAAAAGGACCGGTTT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTAAACCGGTCCTTTTGTaGCCTCTCACATGGACTTTA +
Preference number: 5 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTKPVLL*PLTWTL
Trigger: TAAAGTCCATGTGAGAGGCAACAAAAGGACCGGTTT...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGATTGTAGTTGATACTTaGCCTCCAAGTCCGAGGTGC +
Preference number: 5 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVIVVDT*PPSPRC
Trigger: GCACCTCGGACTTGGAGGCAAAGTATCAACTACAAT...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680682.1
CDS GCA 90 bp ATCAAGTGGTCCTTCTTCTTCGCCCTGGTGGATCGTTGCAGATGGTaGATTCTTTTTGGTTTTAACATTCAAGCTGCTCTCTACAGGACT +
Preference number: 5 (lower is better)
Translates to: IKWSFFFALVDRCRW*ILFGFNIQAALYRT
Trigger: AGTCCTGTAGAGAGCAGCTTGAATGTTAAAACCAAAAAGAATGCACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGGACCACTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000554940.1
ENST00000555087.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 90 bp CAAGACGCCTTTCTTTGTTTTGCCTTCATCAGCCTGAGTGCTATTTaGAAGCAATACTCTGCCCACATTTCGACGGAAGCTGTTATTCCT +
Preference number: 5 (lower is better)
Translates to: QDAFLCFAFISLSAI*KQYSAHISTEAVIP
Trigger: AGGAATAACAGCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAAAACAAAGAAAGGCGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 90 bp TTAGTATTCCTCTTCAGCTTCAGTCCCTTTTGCTTTCTTATGGATTaGCCGATTAAAGCTGTGGCAGGCAGGAACCCAGTGATTGTCATG +
Preference number: 5 (lower is better)
Translates to: LVFLFSFSPFCFLMD*PIKAVAGRNPVIVM
Trigger: CATGACAATCACTGGGTTCCTGCCTGCCACAGCTTTAATCGGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCTGAAGAGGAATACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 90 bp GTTGATCCTTCCCCAAAGACCGAACAACTTTCGATTCAAATCCACTaGGATTCCAAGCGTTCGTGGAAGACAACTTCCTTTTTCTACCCT +
Preference number: 5 (lower is better)
Translates to: VDPSPKTEQLSIQIH*DSKRSWKTTSFFYP
Trigger: AGGGTAGAAAAAGGAAGTTGTCTTCCACGAACGCTTGGAATCGCAGTGGATTTGAATCGAAAGTTGTTCGGTCTTTGGGGAAGGATCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557647.5
CDS CCA 90 bp GATATCAAGTGGTCCTTCTTCTTCGCCCTGGTGGATCGTTGCAGATaGTGCATTCTTTTTGGTTTTAACATTCAAGCTGCTCTCTACAGG +
Preference number: 5 (lower is better)
Translates to: DIKWSFFFALVDRCR*CILFGFNIQAALYR
Trigger: CCTGTAGAGAGCAGCTTGAATGTTAAAACCAAAAAGAATGCACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGGACCACTTGATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000554940.1
ENST00000555087.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAATCATTTACAGCCTTTaGGTGGTTCATAGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLIIYSL*VVHRSS
Trigger: AGAACTCCTATGAACCACCAAAAGGCTGTAAATGAT...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCATACTGCACAGAACATTaGGAGAAAGGATCCCAAATG +
Preference number: 5 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAYCTEH*EKGSQM
Trigger: CATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGTA...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCTGCAAAAGGCTCAGGTaGGTAGCACCTGCTGTTAAC +
Preference number: 5 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGCKRLR*VAPAVN
Trigger: GTTAACAGCAGGTGCTACCAACCTGAGCCTTTTGCA...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TCAGGTGAGGGCCTTCAGGAAGATGGCATATTTTCTGGTGTTGAGAATGGTTGTCAGAAAACCTCACAATaGCAGGTGAGTTTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: SGEGLQEDGIFSGVENGCQKTSQ*QVSLCS
Trigger: ACTGCACAAACTCACCTGCAATTGTGAGGTTTTCTG...ACAACCATTCTCAACACCAGAAAATATGCCATCTTCCTGAAGGCCCTCACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CAA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTCAGAAAACCTCACAATaGCAGGTGAGTTTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSQKTSQ*QVSLCS
Trigger: ACTGCACAAACTCACCTGCAATTGTGAGGTTTTCTG...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TATGTGATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCAGCCTGAGTGCTATTaGCAAGCAATACTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: YVIGMIAPLINHSEVCHAQPECY*QAILCP
Trigger: TGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTG...GGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATCACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCATGGTCTTTGTCTACCTaGGACACAGTGATACTAATG +
Preference number: 5 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAWSLST*DTVILM
Trigger: CATTAGTATCACTGTGTCCAAGGTAGACAAAGACCA...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGCTGAAGACTCTTTTGTaGTGCTTTCATTCAACTGGG +
Preference number: 5 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMLKTLL*CFHSTG
Trigger: CCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAG...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGCTTTACTGAAGACTCTTTTGTaGTGCTTTCATTCAACTGGG +
Preference number: 5 (lower is better)
Translates to: DSGGYAHLNGVSRCFAALLKTLL*CFHSTG
Trigger: CCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAG...TAAAGCTGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGCCTCTGAAGACTCTTTaGTTGTGCTTTCATTCAACT +
Preference number: 5 (lower is better)
Translates to: SSHKHQSHRIKHTRSKVGPLKTL*LCFHST
Trigger: AGTTGAATGAAAGCACAACAAAAGAGTCTTCAGAGG...CCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTACCTCTGAAGACTCTTTaGTTGTGCTTTCATTCAACT +
Preference number: 5 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLPLKTL*LCFHST
Trigger: AGTTGAATGAAAGCACAACAAAAGAGTCTTCAGAGG...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GGTTGGCTCATGAGGTGTAAGAAGCTGTCTCTGAGCCCCTCCTTAGCTTTCAATTTCACATACTTTTTCTaGCACTGTTTGCAAGGATCC +
Preference number: 5 (lower is better)
Translates to: GWLMRCKKLSLSPSLAFNFTYFF*HCLQGS
Trigger: GGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGAA...ATTGAAAGCTAAGGAGGGGCTCAGAGACAGCTTCTTACACCTCATGAGCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555280.1
CDS-3UTR CAA 90 bp AGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATTTCACATACTTTTTCTaGCACTGTTTGCAAGGATCC +
Preference number: 5 (lower is better)
Translates to: SPWNLWIPELLSPSLAFNFTYFF*HCLQGS
Trigger: GGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGAA...ATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS-3UTR CAA 90 bp CCTCCTCTAGTTTCCCTGGTTCTGGTTTTTGCTTCAGATGATCAAGTAAGGGTGAAACCGGTCCTTTTGTaGCCTCTCACATGGACTTTA +
Preference number: 5 (lower is better)
Translates to: PPLVSLVLVFASDDQVRVKPVLL*PLTWTL
Trigger: TAAAGTCCATGTGAGAGGCAACAAAAGGACCGGTTT...CACCCTTACTTGATCATCTGAAGCAAAAACCAGAACCAGGGAAACTAGAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555280.1
ENST00000680682.1
ENST00000681074.1
CDS-3UTR CAA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATAAACCGGTCCTTTTGTaGCCTCTCACATGGACTTTA +
Preference number: 5 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHKPVLL*PLTWTL
Trigger: TAAAGTCCATGTGAGAGGCAACAAAAGGACCGGTTT...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCATTGTAGTTGATACTTaGCCTCCAAGTCCGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LNGVSRCFAALETGPFVAIVVDT*PPSPRC
Trigger: GCACCTCGGACTTGGAGGCAAAGTATCAACTACAAT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS GCA 90 bp GCAAGGATCCTCTCTATAGCGTGGATCTCGAACCCAGCGAGAATCTaGTGGCCTGATATTGTAGTACTCAATGATAAACTTGAAATAGCA +
Preference number: 5 (lower is better)
Translates to: ARILSIAWISNPARI*WPDIVVLNDKLEIA
Trigger: TGCTATTTCAAGTTTATCATTGAGTACTACAATATCAGGCCAGCAGATTCTCGCTGGGTTCGAGATCCACGCTATAGAGAGGATCCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 90 bp AGGATCCTCTCTATAGCGTGGATCTCGAACCCAGCGAGAATCTGCTaGCCTGATATTGTAGTACTCAATGATAAACTTGAAATAGCAGCA +
Preference number: 5 (lower is better)
Translates to: RILSIAWISNPARIC*PDIVVLNDKLEIAA
Trigger: TGCTGCTATTTCAAGTTTATCATTGAGTACTACAATATCAGGCCAGCAGATTCTCGCTGGGTTCGAGATCCACGCTATAGAGAGGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGATCATTTACAGCCTTTaGGTGGTTCATAGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: VIHSQLNPTVGYHPGSNMIIYSL*VVHRSS
Trigger: AGAACTCCTATGAACCACCAAAAGGCTGTAAATGAT...CATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGAGATGCCACTAGTTATGTGGCTAGCTTaGCATGTTTCATCATTTACA +
Preference number: 5 (lower is better)
Translates to: PTESNCGIPPGFKHEMPLVMWLA*HVSSFT
Trigger: TGTAAATGATGAAACATGCAAAGCTAGCCACATAAC...TAGTGGCATCTCATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCTGGGTTCAAGCAATTCTTCCATCTCAACCTCCCGAGTAGCTGGGATTATAGGGTTATGTGGCTAGCTTaGCATGTTTCATCATTTACA +
Preference number: 5 (lower is better)
Translates to: PGFKQFFHLNLPSSWDYRVMWLA*HVSSFT
Trigger: TGTAAATGATGAAACATGCAAAGCTAGCCACATAAC...CCTATAATCCCAGCTACTCGGGAGGTTGAGATGGAAGAATTGCTTGAACCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATTACTGCACAGAACATTaGGAGAAAGGATCCCAAATG +
Preference number: 5 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHYCTEH*EKGSQM
Trigger: CATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGTA...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACTACTGCACAGAACATTaGGAGAAAGGATCCCAAATG +
Preference number: 5 (lower is better)
Translates to: SRCFAALETGPFVASHMDYCTEH*EKGSQM
Trigger: CATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGTA...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGATGGTGCATTCTTTTaGGTTTTAACATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: PATNINLTGSSIRGLRWGDGAFF*VLTFKL
Trigger: CAGCTTGAATGTTAAAACCAAAAAGAATGCACCATC...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp ATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAGTCACAAACGCCCTGGTGGATCGTaGCAGATGGTGCATTCTTTT +
Preference number: 5 (lower is better)
Translates to: IVLGRVAERSLFLSGSHKRPGGS*QMVHSF
Trigger: AAAAGAATGCACCATCTGCAACGATCCACCAGGGCG...TTTGTGACTACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp GTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTCGCCCTGGTGGATCGTaGCAGATGGTGCATTCTTTT +
Preference number: 5 (lower is better)
Translates to: VFCIVLGRVAERSLFLSGRPGGS*QMVHSF
Trigger: AAAAGAATGCACCATCTGCAACGATCCACCAGGGCG...ACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTATACAAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCTGGTCTTTGTCTACCTaGGACACAGTGATACTAATG +
Preference number: 5 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSWSLST*DTVILM
Trigger: CATTAGTATCACTGTGTCCAAGGTAGACAAAGACCA...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGATGGAAGGCTGGTCTTaGTCTACCTTGGACACAGTG +
Preference number: 5 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGMEGWS*STLDTV
Trigger: CACTGTGTCCAAGGTAGACAAAGACCAGCCTTCCAT...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TGTTGCCAGTGCTCAAAACATTTCTGGAACCCATTTTTGAGGACTACCTGCAGCCTGAAGACTCTTTTGTaGTGCTTTCATTCAACTGGG +
Preference number: 5 (lower is better)
Translates to: CCQCSKHFWNPFLRTTCSLKTLL*CFHSTG
Trigger: CCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAG...GCTGCAGGTAGTCCTCAAAAATGGGTTCCAGAAATGTTTTGAGCACTGGCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACCTGAAGACTCTTTTGTaGTGCTTTCATTCAACTGGG +
Preference number: 5 (lower is better)
Translates to: SRCFAALETGPFVASHMDLKTLL*CFHSTG
Trigger: CCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAG...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATCTGAAGACTCTTTTGTaGTGCTTTCATTCAACTGGG +
Preference number: 5 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHLKTLL*CFHSTG
Trigger: CCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAG...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTTTCACATACTTTTTCTaGCACTGTTTGCAAGGATCC +
Preference number: 5 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTFTYFF*HCLQGS
Trigger: GGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGAA...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCCCAGCTTCACATACTTTTTCTaGCACTGTTTGCAAGGATCC +
Preference number: 5 (lower is better)
Translates to: DWHDSTSDKSFRGLPCPSFTYFF*HCLQGS
Trigger: GGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGAA...GCTGGGGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCAAACCGGTCCTTTTGTaGCCTCTCACATGGACTTTA +
Preference number: 5 (lower is better)
Translates to: LNGVSRCFAALETGPFVAKPVLL*PLTWTL
Trigger: TAAAGTCCATGTGAGAGGCAACAAAAGGACCGGTTT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp ATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAGTCACAAAGGGGGCTACGCTCATTaGAACGGTGTATCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: IVLGRVAERSLFLSGSHKGGYAH*NGVSRC
Trigger: ACACCTAGATACACCGTTCAAATGAGCGTAGCCCCC...TTTGTGACTACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp CCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTATTATTTGGTATCCTTaGAGCAGGTTAGCCTTTCAA +
Preference number: 5 (lower is better)
Translates to: PATNINLTGSSIRGLRWGIIWYP*SRLAFQ
Trigger: TTGAAAGGCTAACCTGCTCAAAGGATACCAAATAAT...ACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
CDS-3UTR CAA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACGTGTTTTGTATAGTTTaGGGTAGAGTTGCAGAACGG +
Preference number: 5 (lower is better)
Translates to: SRCFAALETGPFVASHMDVFCIV*GRVAER
Trigger: CCGTTCTGCAACTCTACCCAAAACTATACAAAACAC...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp AGTCCATGGAATTTGTGGATCCCGGAGTTGCTGAGCCCCTCCTTAGCTTTCAATGCATATTTTCTGGTGTaGAGAATGGTTGTTATCCTA +
Preference number: 5 (lower is better)
Translates to: SPWNLWIPELLSPSLAFNAYFLV*RMVVIL
Trigger: TAGGATAACAACCATTCTCAACACCAGAAAATATGC...ATTGAAAGCTAAGGAGGGGCTCAGCAACTCCGGGATCCACAAATTCCATGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681074.1
CDS CCA 90 bp AACATCCCTGGAACTGGGTCTTCACAGGAGTTTAAAATGGAAGGCTaGTCTTTGTCTACCTTGGACACAGTGATACTAATGCACAAAGAT +
Preference number: 5 (lower is better)
Translates to: NIPGTGSSQEFKMEG*SLSTLDTVILMHKD
Trigger: ATCTTTGTGCATTAGTATCACTGTGTCCAAGGTAGACAAAGACCAGCCTTCCATTTTAAACTCCTGTGAAGACCCAGTTCCAGGGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAGTTATGTGGCTAGCTTaGCATGTTTCATCATTTACA +
Preference number: 5 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAVMWLA*HVSSFT
Trigger: TGTAAATGATGAAACATGCAAAGCTAGCCACATAAC...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AAACATCAATCTCACAGGATCAAGCATACGAGGTCTAAGGTGGGGTGCCTGACTGATGGTGCATTCTTTTaGGTTTTAACATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: KHQSHRIKHTRSKVGCLTDGAFF*VLTFKL
Trigger: CAGCTTGAATGTTAAAACCAAAAAGAATGCACCATC...AGTCAGGCACCCCACCTTAGACCTCGTATGCTTGATCCTGTGAGATTGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACAGAAAACCTCACAATaGCAGGTGAGTTTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPQKTSQ*QVSLCS
Trigger: ACTGCACAAACTCACCTGCAATTGTGAGGTTTTCTG...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTGGTCTTTGTCTACCTaGGACACAGTGATACTAATG +
Preference number: 5 (lower is better)
Translates to: LNGVSRCFAALETGPFVAWSLST*DTVILM
Trigger: CATTAGTATCACTGTGTCCAAGGTAGACAAAGACCA...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCCTGAAGACTCTTTTGTaGTGCTTTCATTCAACTGGG +
Preference number: 5 (lower is better)
Translates to: LNGVSRCFAALETGPFVALKTLL*CFHSTG
Trigger: CCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAG...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGCAGCTTCAGTCCCTTTaGCTTTCTTATGGATTGCCC +
Preference number: 5 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGQLQSL*LSYGLP
Trigger: GGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCTG...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCTAATGGTAAACCGGTCCTTTTGTaGCCTCTCACATGGACTTTA +
Preference number: 5 (lower is better)
Translates to: VVDTLPPSPRCYIAFANGKPVLL*PLTWTL
Trigger: TAAAGTCCATGTGAGAGGCAACAAAAGGACCGGTTT...ACCATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCAATTATTTGGTATCCTTaGAGCAGGTTAGCCTTTCAA +
Preference number: 5 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAIIWYP*SRLAFQ
Trigger: TTGAAAGGCTAACCTGCTCAAAGGATACCAAATAAT...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTGATGACTCAGGGGGCTACGCTCATTTGAACGGTGTATCTAGGTGTTTTGCACAGTTAAACCATTATTaGGTATCCTTTGAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: SDDSGGYAHLNGVSRCFAQLNHY*VSFEQV
Trigger: AACCTGCTCAAAGGATACCAAATAATGGTTTAACTG...TGCAAAACACCTAGATACACCGTTCAAATGAGCGTAGCCCCCTGAGTCATCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
CDS-3UTR CAA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTAGTGGGATTTGGAGCTaGGTGGTGGAGACTGACTTC +
Preference number: 5 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFSGIWS*VVETDF
Trigger: GAAGTCAGTCTCCACCACCAAGCTCCAAATCCCACT...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCATCATTTACAGCCTTTaGGTGGTTCATAGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LNGVSRCFAALETGPFVAIIYSL*VVHRSS
Trigger: AGAACTCCTATGAACCACCAAAAGGCTGTAAATGAT...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTCTCACATGGACGTTATGTGGCTAGCTTaGCATGTTTCATCATTTACA +
Preference number: 5 (lower is better)
Translates to: SRCFAALETGPFVASHMDVMWLA*HVSSFT
Trigger: TGTAAATGATGAAACATGCAAAGCTAGCCACATAAC...GTCCATGTGAGAGGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGTTATGTGGCTAGCTTaGCATGTTTCATCATTTACA +
Preference number: 5 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHVMWLA*HVSSFT
Trigger: TGTAAATGATGAAACATGCAAAGCTAGCCACATAAC...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGCTAATGGTTACTGCACAGAACATTaGGAGAAAGGATCCCAAATG +
Preference number: 5 (lower is better)
Translates to: VVDTLPPSPRCYIAFANGYCTEH*EKGSQM
Trigger: CATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGTA...ACCATTAGCAAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp AGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCACCCGGGTTCAAACATGATGGTGCATTCTTTTaGGTTTTAACATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: SYSQPTESNCGIPPGFKHDGAFF*VLTFKL
Trigger: CAGCTTGAATGTTAAAACCAAAAAGAATGCACCATC...ATGTTTGAACCCGGGTGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTATGGAAGGCTGGTCTTaGTCTACCTTGGACACAGTG +
Preference number: 5 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFMEGWS*STLDTV
Trigger: CACTGTGTCCAAGGTAGACAAAGACCAGCCTTCCAT...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCCTGAAGACTCTTTTGTaGTGCTTTCATTCAACTGGG +
Preference number: 5 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGLKTLL*CFHSTG
Trigger: CCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAG...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCCCTCTGAAGACTCTTTaGTTGTGCTTTCATTCAACT +
Preference number: 5 (lower is better)
Translates to: LNGVSRCFAALETGPFVAPLKTL*LCFHST
Trigger: AGTTGAATGAAAGCACAACAAAAGAGTCTTCAGAGG...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTGAACGGTGTATCTAGGTGTTTTGCAGCTTTAGAAACCGGTCCTTTTGTTGCCTTCACATACTTTTTCTaGCACTGTTTGCAAGGATCC +
Preference number: 5 (lower is better)
Translates to: LNGVSRCFAALETGPFVAFTYFF*HCLQGS
Trigger: GGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGAA...GGCAACAAAAGGACCGGTTTCTAAAGCTGCAAAACACCTAGATACACCGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp AAATCCACCTCCAGCCACAAACATCAATCTCACAGGATCAAGCATACGAGGTCTCAGTTAAACCATTATTaGGTATCCTTTGAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: KSTSSHKHQSHRIKHTRSQLNHY*VSFEQV
Trigger: AACCTGCTCAAAGGATACCAAATAATGGTTTAACTG...AGACCTCGTATGCTTGATCCTGTGAGATTGATGTTTGTGGCTGGAGGTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
CDS-3UTR CAA 90 bp TATGTGATTGGCATGATAGCACCTCTGATAAATCATTCAGAGGTTTGCCATGCCGTGTTTTGTATAGTTTaGGGTAGAGTTGCAGAACGG +
Preference number: 5 (lower is better)
Translates to: YVIGMIAPLINHSEVCHAVFCIV*GRVAER
Trigger: CCGTTCTGCAACTCTACCCAAAACTATACAAAACAC...GGCATGGCAAACCTCTGAATGATTTATCAGAGGTGCTATCATGCCAATCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS TCA 90 bp TCTACCTTGGACACAGTGATACTAATGCACAAAGATTCTTTTCTTTaGTCAGGATTTCGGCTAGTAAGGGACACAAGCTCTCTGCTCATA +
Preference number: 5 (lower is better)
Translates to: STLDTVILMHKDSFL*SGFRLVRDTSSLLI
Trigger: TATGAGCAGAGAGCTTGTGTCCCTTACTAGCCGAAATCCTGATCAAAGAAAAGAATCTTTGTGCATTAGTATCACTGTGTCCAAGGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 90 bp AAATTGCAAAATGCTGATACCGAACAACTTTCGATTCAAATCCACTaGGATTCCAAGCGTTCGTGGAAGACAACTTCCTTTTTCTACCCT +
Preference number: 5 (lower is better)
Translates to: KLQNADTEQLSIQIH*DSKRSWKTTSFFYP
Trigger: AGGGTAGAAAAAGGAAGTTGTCTTCCACGAACGCTTGGAATCGCAGTGGATTTGAATCGAAAGTTGTTCGGTATCAGCATTTTGCAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555087.1
CDS-3UTR CAA 90 bp ATTTTAATCGTGCTATTCACAGAGGGGCCAAAGCACTCATCTAAAGGTAAAGGCCCTCTGAAGACTCTTTaGTTGTGCTTTCATTCAACT +
Preference number: 5 (lower is better)
Translates to: ILIVLFTEGPKHSSKGKGPLKTL*LCFHST
Trigger: AGTTGAATGAAAGCACAACAAAAGAGTCTTCAGAGG...GCCTTTACCTTTAGATGAGTGCTTTGGCCCCTCTGTGAATAGCACGATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTTAGGAAAACAGGCAGTTATTCACAGCCAACTGAATCCAACTGTGGGATACCAGATGGTGCATTCTTTTaGGTTTTAACATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: FRKTGSYSQPTESNCGIPDGAFF*VLTFKL
Trigger: CAGCTTGAATGTTAAAACCAAAAAGAATGCACCATC...TGGTATCCCACAGTTGGATTCAGTTGGCTGTGAATAACTGCCTGTTTTCCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTCAGAAAACCTCACAATaGCAGGTGAGTTTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFQKTSQ*QVSLCS
Trigger: ACTGCACAAACTCACCTGCAATTGTGAGGTTTTCTG...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp CCGTTAGCTGTCCATTATATACAACTGGATTTTAATCGTGCTATTCACAGAGGGGATGGTGCATTCTTTTaGGTTTTAACATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: PLAVHYIQLDFNRAIHRGDGAFF*VLTFKL
Trigger: CAGCTTGAATGTTAAAACCAAAAAGAATGCACCATC...CCCTCTGTGAATAGCACGATTAAAATCCAGTTGTATATAATGGACAGCTAACGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000313833.5
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp TTTCTCATCATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATCTGAAGACTCTTTTGTaGTGCTTTCATTCAACTGGG +
Preference number: 5 (lower is better)
Translates to: FLIIIIVVDTLPPSPRCYLKTLL*CFHSTG
Trigger: CCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAG...ATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTATGATGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCAAACCGGTCCTTTTGTaGCCTCTCACATGGACTTTA +
Preference number: 5 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCKPVLL*PLTWTL
Trigger: TAAAGTCCATGTGAGAGGCAACAAAAGGACCGGTTT...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp ATAGTTTTGGGTAGAGTTGCAGAACGGAGTTTATTTCTATCCGGTAGTCACAAAGTTATGTGGCTAGCTTaGCATGTTTCATCATTTACA +
Preference number: 5 (lower is better)
Translates to: IVLGRVAERSLFLSGSHKVMWLA*HVSSFT
Trigger: TGTAAATGATGAAACATGCAAAGCTAGCCACATAAC...TTTGTGACTACCGGATAGAAATAAACTCCGTTCTGCAACTCTACCCAAAACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp ACCATTATTTGGTATCCTTTGAGCAGGTTAGCCTTTCAACTATTTAGAGTTTCTTGGTCTTTGTCTACCTaGGACACAGTGATACTAATG +
Preference number: 5 (lower is better)
Translates to: TIIWYPLSRLAFQLFRVSWSLST*DTVILM
Trigger: CATTAGTATCACTGTGTCCAAGGTAGACAAAGACCA...AGAAACTCTAAATAGTTGAAAGGCTAACCTGCTCAAAGGATACCAAATAATGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313833.5
ENST00000681904.1
CDS-3UTR CAA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTTTCACATACTTTTTCTaGCACTGTTTGCAAGGATCC +
Preference number: 5 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFFTYFF*HCLQGS
Trigger: GGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGAA...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCATCATTTACAGCCTTTaGGTGGTTCATAGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCIIYSL*VVHRSS
Trigger: AGAACTCCTATGAACCACCAAAAGGCTGTAAATGAT...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTATCATTTACAGCCTTTaGGTGGTTCATAGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFIIYSL*VVHRSS
Trigger: AGAACTCCTATGAACCACCAAAAGGCTGTAAATGAT...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp GAACGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTTTGATGGTGCATTCTTTTaGGTTTTAACATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: ERSLFLSGSHKFLGSMNFDGAFF*VLTFKL
Trigger: CAGCTTGAATGTTAAAACCAAAAAGAATGCACCATC...AAAATTCATAGAGCCAAGGAATTTGTGACTACCGGATAGAAATAAACTCCGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS-3UTR CAA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCCCTCTGAAGACTCTTTaGTTGTGCTTTCATTCAACT +
Preference number: 5 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCPLKTL*LCFHST
Trigger: AGTTGAATGAAAGCACAACAAAAGAGTCTTCAGAGG...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp CTGCTATTCTTTTCACAGGACAATATTCACTTATTTCAAATATGTTGCCAGTGCGTTATGTGGCTAGCTTaGCATGTTTCATCATTTACA +
Preference number: 5 (lower is better)
Translates to: LLFFSQDNIHLFQICCQCVMWLA*HVSSFT
Trigger: TGTAAATGATGAAACATGCAAAGCTAGCCACATAAC...GCACTGGCAACATATTTGAAATAAGTGAATATTGTCCTGTGAAAAGAATAGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000679934.1
ENST00000681400.1
ENST00000681904.1
CDS-3UTR CAA 90 bp ATAATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTTTGATGGTGCATTCTTTTaGGTTTTAACATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: IIIVVDTLPPSPRCYIAFDGAFF*VLTFKL
Trigger: CAGCTTGAATGTTAAAACCAAAAAGAATGCACCATC...AAAAGCTATATAGCACCTCGGACTTGGAGGCAAAGTATCAACTACAATTATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680658.1
ENST00000680682.1
CDS CCA 72 bp ACCCTGGCCCATAGGGCAATGCCTGGCAATAGGGCTTaGGGTGCCATCGGCACAGGGACACATCCCCTTTCA +
Preference number: 6 (lower is better)
Translates to: TLAHRAMPGNRA*GAIGTGTHPLS
Trigger: TGAAAGGGGATGTGTCCCTGTGCCGATGGCACCCCAAGCCCTATTGCCAGGCATTGCCCTATGGGCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 72 bp CGCTGGCCCTGCCGCTTCAGGCACTCAGACTCCAACTaGGCTACCATGTCAAGGACACGGACTGGTTCGCTC +
Preference number: 6 (lower is better)
Translates to: RWPCRFRHSDSN*ATMSRTRTGSL
Trigger: GAGCGAACCAGTCCGTGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGTGCCTGAAGCGGCAGGGCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 90 bp CCAGGCTCACGCTGGCCCTGCCGCTTCAGGCACTCAGACTCCAACTaGGCTACCATGTCAAGGACACGGACTGGTTCGCTCTGTGGTTCA +
Preference number: 6 (lower is better)
Translates to: PGSRWPCRFRHSDSN*ATMSRTRTGSLCGS
Trigger: TGAACCACAGAGCGAACCAGTCCGTGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp TTATTCCTTGAGAGGCTCCCAGGCTCACGCTGGCCCTaGCGCTTCAGGCACTCAGACTCCAACTTGGCTACC +
Preference number: 6 (lower is better)
Translates to: LFLERLPGSRWP*RFRHSDSNLAT
Trigger: GGTAGCCAAGTTGGAGTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAGCCTCTCAAGGAATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 72 bp GCTGGCCCTGCCGCTTCAGGCACTCAGACTCCAACTTaGCTACCATGTCAAGGACACGGACTGGTTCGCTCT +
Preference number: 6 (lower is better)
Translates to: AGPAASGTQTPT*LPCQGHGLVRS
Trigger: AGAGCGAACCAGTCCGTGTCCTTGACATGGTAGCCAAGTTGGAGTCTGAGTGCCTGAAGCGGCAGGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 72 bp TGCACTGTCTATGTGGAAACTCACTCCTGCTGGCAATaGGGGGCAGTCCTGAGAAGCACCGTCCCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: CTVYVETHSCWQ*GAVLRSTVPGL
Trigger: CAGGCCTGGGACGGTGCTTCTCAGGACTGCCCCCCATTGCCAGCAGGAGTGAGTTTCCACATAGACAGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 72 bp ATACTCTGCCCACATTTCGACGGAAGCTGTTATTCCTaGAGAGGCTCCCAGGCTCACGCTGGCCCTGCCGCT +
Preference number: 6 (lower is better)
Translates to: ILCPHFDGSCYS*RGSQAHAGPAA
Trigger: AGCGGCAGGGCCAGCGTGAGCCTGGGAGCCTCTCAAGGAATAACAGCTTCCGTCGAAATGTGGGCAGAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 90 bp TTGCAAGCAATACTCTGCCCACATTTCGACGGAAGCTGTTATTCCTaGAGAGGCTCCCAGGCTCACGCTGGCCCTGCCGCTTCAGGCACT +
Preference number: 6 (lower is better)
Translates to: LQAILCPHFDGSCYS*RGSQAHAGPAASGT
Trigger: AGTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAGCCTCTCAAGGAATAACAGCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS TCA 72 bp GGCCTGGTCCTCCTTAGGAGAACAACGATCAGCTCTTaGAGGGCCACAATCCACAGATACAGACCCCACAGG +
Preference number: 6 (lower is better)
Translates to: GLVLLRRTTISS*RATIHRYRPHR
Trigger: CCTGTGGGGTCTGTATCTGTGGATTGTGGCCCTTCAAGAGCTGATCGTTGTTCTCCTAAGGAGGACCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 72 bp GGCTACCATGTCAAGGACACGGACTGGTTCGCTCTGTaGTTCACCAACCTCAAGATTTCCCCTTTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: GYHVKDTDWFAL*FTNLKISPFCG
Trigger: CCCACAGAAAGGGGAAATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTCCGTGTCCTTGACATGGTAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS TCA 72 bp CCACAATCCACAGATACAGACCCCACAGGATTCACCTaGGTGTCAGGTGCCTCCAAGACGCCTTTCTTTGTT +
Preference number: 6 (lower is better)
Translates to: PQSTDTDPTGFT*VSGASKTPFFV
Trigger: AACAAAGAAAGGCGTCTTGGAGGCACCTGACACTCAGGTGAATCCTGTGGGGTCTGTATCTGTGGATTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp CACTGTCACTCACATAGTGCACAGAACAGTGCTCAATaGCACATGCAAAAGGCTCAGGTTGGTAGCACCTGC +
Preference number: 6 (lower is better)
Translates to: HCHSHSAQNSAQ*HMQKAQVGSTC
Trigger: GCAGGTGCTACCAACCTGAGCCTTTTGCATGTGGCATTGAGCACTGTTCTGTGCACTATGTGAGTGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 72 bp AGACTCCAACTTGGCTACCATGTCAAGGACACGGACTaGTTCGCTCTGTGGTTCACCAACCTCAAGATTTCC +
Preference number: 6 (lower is better)
Translates to: RLQLGYHVKDTD*FALWFTNLKIS
Trigger: GGAAATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTCCGTGTCCTTGACATGGTAGCCAAGTTGGAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 72 bp TCAGATGCACTGTCACCCCCAGCAGCATCTTCAAGCTaGCTGGCCTCTGAAGACTCTTTTGTTGTGCTTTCA +
Preference number: 6 (lower is better)
Translates to: SDALSPPAASSS*LASEDSFVVLS
Trigger: TGAAAGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATGCTGCTGGGGGTGACAGTGCATCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 90 bp ATAGTGCACAGAACAGTGCTCAATGCCACATGCAAAAGGCTCAGGTaGGTAGCACCTGCTGTTAACCTCCCTCATCCTTTCCACCTGTAC +
Preference number: 6 (lower is better)
Translates to: IVHRTVLNATCKRLR*VAPAVNLPHPFHLY
Trigger: GTACAGGTGGAAAGGATGAGGGAGGTTAACAGCAGGTGCTACCAACCTGAGCCTTTTGCATGTGGCATTGAGCACTGTTCTGTGCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 90 bp CCCCAGCAGCATCTTCAAGCTGGCTGGCCTCTGAAGACTCTTTTGTaGTGCTTTCATTCAACTGGGAATAGTCTGACAAGTGCTGACCAG +
Preference number: 6 (lower is better)
Translates to: PQQHLQAGWPLKTLL*CFHSTGNSLTSADQ
Trigger: CTGGTCAGCACTTGTCAGACTATTCCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATGCTGCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS TCA 72 bp CCCCTGAGTTTCACAAACACTCAGCAGAGGGCGTGGTaGGGGAAGTTTCAACAATGTTCCTCCACTTACTGT +
Preference number: 6 (lower is better)
Translates to: PLSFTNTQQRAW*GKFQQCSSTYC
Trigger: ACAGTAAGTGGAGGAACATTGTTGAAACTTCCCTCACCACGCCCTCTGCTGAGTGTTTGTGAAACTCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679934.1
CDS CCA 72 bp TCTGTGGTTCACCAACCTCAAGATTTCCCCTTTCTGTaGGTTCTTCACAAGCTCCTGGGGCAGAATAGGACT +
Preference number: 6 (lower is better)
Translates to: SVVHQPQDFPFL*VLHKLLGQNRT
Trigger: AGTCCTATTCTGCCCCAGGAGCTTGTGAAGAACCCACAGAAAGGGGAAATCTTGAGGTTGGTGAACCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 72 bp ATGCACTGTCACCCCCAGCAGCATCTTCAAGCTGGCTaGCCTCTGAAGACTCTTTTGTTGTGCTTTCATTCA +
Preference number: 6 (lower is better)
Translates to: MHCHPQQHLQAG*PLKTLLLCFHS
Trigger: TGAATGAAAGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATGCTGCTGGGGGTGACAGTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 72 bp AGAACAGTGCTCAATGCCACATGCAAAAGGCTCAGGTaGGTAGCACCTGCTGTTAACCTCCCTCATCCTTTC +
Preference number: 6 (lower is better)
Translates to: RTVLNATCKRLR*VAPAVNLPHPF
Trigger: GAAAGGATGAGGGAGGTTAACAGCAGGTGCTACCAACCTGAGCCTTTTGCATGTGGCATTGAGCACTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 90 bp CCACAGGATTCACCTGAGTGTCAGGTGCCTCCAAGACGCCTTTCTTaGTTTTGCCTTCATCAGCCTGAGTGCTATTTGCAAGCAATACTC +
Preference number: 6 (lower is better)
Translates to: PQDSPECQVPPRRLS*FCLHQPECYLQAIL
Trigger: GAGTATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAAAACAAAGAAAGGCGTCTTGGAGGCACCTGACACTCAGGTGAATCCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp TCCACATCATATCTGTTGCTGTTTTTCACGGCAGTTTaGGAACCCGGCTCTAACTCTGCACTGTCTATGTGG +
Preference number: 6 (lower is better)
Translates to: STSYLLLFFTAV*EPGSNSALSMW
Trigger: CCACATAGACAGTGCAGAGTTAGAGCCGGGTTCGCAAACTGCCGTGAAAAACAGCAACAGATATGATGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 72 bp ACAGCCCAGATATCAAGTGGTCCTTCTTCTTCGCCCTaGTGGATCGTTGCAGATGGTGCATTCTTTTTGGTT +
Preference number: 6 (lower is better)
Translates to: TAQISSGPSSSP*WIVADGAFFLV
Trigger: AACCAAAAAGAATGCACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGGACCACTTGATATCTGGGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000554940.1
ENST00000555087.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 90 bp CCTTCTTCTTCGCCCTGGTGGATCGTTGCAGATGGTGCATTCTTTTaGGTTTTAACATTCAAGCTGCTCTCTACAGGACTCTTCCCACTC +
Preference number: 6 (lower is better)
Translates to: PSSSPWWIVADGAFF*VLTFKLLSTGLFPL
Trigger: GAGTGGGAAGAGTCCTGTAGAGAGCAGCTTGAATGTTAAAACCAAAAAGAATGCACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000554940.1
ENST00000555087.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 90 bp AGCTGCTCTCTACAGGACTCTTCCCACTCATACTGCACAGAACATTaGGAGAAAGGATCCCAAATGGCTTTCGAGATGATGCTTTACCGA +
Preference number: 6 (lower is better)
Translates to: SCSLQDSSHSYCTEH*EKGSQMAFEMMLYR
Trigger: TCGGTAAAGCATCATCTCGAAAGCCATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGTATGAGTGGGAAGAGTCCTGTAGAGAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000554940.1
ENST00000555087.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 90 bp CCAAGACGCCTTTCTTTGTTTTGCCTTCATCAGCCTGAGTGCTATTaGCAAGCAATACTCTGCCCACATTTCGACGGAAGCTGTTATTCC +
Preference number: 6 (lower is better)
Translates to: PRRLSLFCLHQPECY*QAILCPHFDGSCYS
Trigger: GGAATAACAGCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAAAACAAAGAAAGGCGTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp TCAAGCTGCTCTCTACAGGACTCTTCCCACTCATACTaGACAGAACATTTGGAGAAAGGATCCCAAATGGCT +
Preference number: 6 (lower is better)
Translates to: SSCSLQDSSHSY*TEHLEKGSQMA
Trigger: AGCCATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGTATGAGTGGGAAGAGTCCTGTAGAGAGCAGCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000554940.1
ENST00000555087.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp ATTTTAAACCTGGTCTCCAGGAAGTCATGCGACACCTaGTTCTTCCAACTGGATGCCTCAAGCACTGGTAAT +
Preference number: 6 (lower is better)
Translates to: ILNLVSRKSCDT*FFQLDASSTGN
Trigger: ATTACCAGTGCTTGAGGCATCCAGTTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAGACCAGGTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp GGCACAGGGACACATCCCCTTTCACATACTTTTTCTTaGACTGTTTGCAAGGATCCTCTCTATAGCGTGGAT +
Preference number: 6 (lower is better)
Translates to: GTGTHPLSHTFS*TVCKDPLYSVD
Trigger: ATCCACGCTATAGAGAGGATCCTTGCAAACAGTGCAAGAAAAAGTATGTGAAAGGGGATGTGTCCCTGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp TCCTTCTTCTTCGCCCTGGTGGATCGTTGCAGATGGTaGATTCTTTTTGGTTTTAACATTCAAGCTGCTCTC +
Preference number: 6 (lower is better)
Translates to: SFFFALVDRCRW*ILFGFNIQAAL
Trigger: GAGAGCAGCTTGAATGTTAAAACCAAAAAGAATGCACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000554940.1
ENST00000555087.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp CTTCATCAGCCTGAGTGCTATTTGCAAGCAATACTCTaGCCACATTTCGACGGAAGCTGTTATTCCTTGAGA +
Preference number: 6 (lower is better)
Translates to: LHQPECYLQAIL*PHFDGSCYSLR
Trigger: TCTCAAGGAATAACAGCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp CAACGAGTTCATCTGTCATTTCCACATCATATCTGTTaGTGTTTTTCACGGCAGTTTGCGAACCCGGCTCTA +
Preference number: 6 (lower is better)
Translates to: QRVHLSFPHHIC*CFSRQFANPAL
Trigger: TAGAGCCGGGTTCGCAAACTGCCGTGAAAAACAGCAACAGATATGATGTGGAAATGACAGATGAACTCGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp TCCCCAAAGACCGAACAACTTTCGATTCAAATCCACTaGGATTCCAAGCGTTCGTGGAAGACAACTTCCTTT +
Preference number: 6 (lower is better)
Translates to: SPKTEQLSIQIH*DSKRSWKTTSF
Trigger: AAAGGAAGTTGTCTTCCACGAACGCTTGGAATCGCAGTGGATTTGAATCGAAAGTTGTTCGGTCTTTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557647.5
CDS CCA 72 bp TGGCTAGCTTTGCATGTTTCATCATTTACAGCCTTTTaGTGGTTCATAGGAGTTCTCTGCGTTTCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: WLALHVSSFTAF*WFIGVLCVSLL
Trigger: CAGCAGGGAAACGCAGAGAACTCCTATGAACCACCAAAAGGCTGTAAATGATGAAACATGCAAAGCTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000554940.1
ENST00000555087.1
ENST00000557647.5
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 72 bp CTACAGGACTCTTCCCACTCATACTGCACAGAACATTaGGAGAAAGGATCCCAAATGGCTTTCGAGATGATG +
Preference number: 6 (lower is better)
Translates to: LQDSSHSYCTEH*EKGSQMAFEMM
Trigger: CATCATCTCGAAAGCCATTTGGGATCCTTTCTCCAAATGTTCTGTGCAGTATGAGTGGGAAGAGTCCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000554940.1
ENST00000555087.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 72 bp CTTTCTTTGTTTTGCCTTCATCAGCCTGAGTGCTATTaGCAAGCAATACTCTGCCCACATTTCGACGGAAGC +
Preference number: 6 (lower is better)
Translates to: LSLFCLHQPECY*QAILCPHFDGS
Trigger: GCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAAAACAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 72 bp CAGCATCTTCAAGCTGGCTGGCCTCTGAAGACTCTTTaGTTGTGCTTTCATTCAACTGGGAATAGTCTGACA +
Preference number: 6 (lower is better)
Translates to: QHLQAGWPLKTL*LCFHSTGNSLT
Trigger: TGTCAGACTATTCCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp TTTCTTTGTTTTGCCTTCATCAGCCTGAGTGCTATTTaGAAGCAATACTCTGCCCACATTTCGACGGAAGCT +
Preference number: 6 (lower is better)
Translates to: FLCFAFISLSAI*KQYSAHISTEA
Trigger: AGCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAAAACAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp CTCTCTATAGCGTGGATCTCGAACCCAGCGAGAATCTaGTGGCCTGATATTGTAGTACTCAATGATAAACTT +
Preference number: 6 (lower is better)
Translates to: LSIAWISNPARI*WPDIVVLNDKL
Trigger: AAGTTTATCATTGAGTACTACAATATCAGGCCAGCAGATTCTCGCTGGGTTCGAGATCCACGCTATAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CCA 72 bp GGAACTGGGTCTTCACAGGAGTTTAAAATGGAAGGCTaGTCTTTGTCTACCTTGGACACAGTGATACTAATG +
Preference number: 6 (lower is better)
Translates to: GTGSSQEFKMEG*SLSTLDTVILM
Trigger: CATTAGTATCACTGTGTCCAAGGTAGACAAAGACCAGCCTTCCATTTTAAACTCCTGTGAAGACCCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 72 bp CATCTTCAAGCTGGCTGGCCTCTGAAGACTCTTTTGTaGTGCTTTCATTCAACTGGGAATAGTCTGACAAGT +
Preference number: 6 (lower is better)
Translates to: HLQAGWPLKTLL*CFHSTGNSLTS
Trigger: ACTTGTCAGACTATTCCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp ATCAAGTGGTCCTTCTTCTTCGCCCTGGTGGATCGTTaGAGATGGTGCATTCTTTTTGGTTTTAACATTCAA +
Preference number: 6 (lower is better)
Translates to: IKWSFFFALVDR*RWCILFGFNIQ
Trigger: TTGAATGTTAAAACCAAAAAGAATGCACCATCTGCAACGATCCACCAGGGCGAAGAAGAAGGACCACTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000554940.1
ENST00000555087.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp TGGACTTTAGTATTCCTCTTCAGCTTCAGTCCCTTTTaGTTTCTTATGGATTGCCCGATTAAAGCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: WTLVFLFSFSPF*FLMDCPIKAVA
Trigger: TGCCACAGCTTTAATCGGGCAATCCATAAGAAAGCAAAAGGGACTGAAGCTGAAGAGGAATACTAAAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS GCA 72 bp AATGCTGATACCGAACAACTTTCGATTCAAATCCACTaGGATTCCAAGCGTTCGTGGAAGACAACTTCCTTT +
Preference number: 6 (lower is better)
Translates to: NADTEQLSIQIH*DSKRSWKTTSF
Trigger: AAAGGAAGTTGTCTTCCACGAACGCTTGGAATCGCAGTGGATTTGAATCGAAAGTTGTTCGGTATCAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555087.1
CDS CCA 72 bp TCTATAGCGTGGATCTCGAACCCAGCGAGAATCTGCTaGCCTGATATTGTAGTACTCAATGATAAACTTGAA +
Preference number: 6 (lower is better)
Translates to: SIAWISNPARIC*PDIVVLNDKLE
Trigger: TTCAAGTTTATCATTGAGTACTACAATATCAGGCCAGCAGATTCTCGCTGGGTTCGAGATCCACGCTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS CAA 90 bp GTCTACCTTGGACACAGTGATACTAATGCACAAAGATTCTTTTCTTaGATCAGGATTTCGGCTAGTAAGGGACACAAGCTCTCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: VYLGHSDTNAQRFFS*IRISASKGHKLSAH
Trigger: ATGAGCAGAGAGCTTGTGTCCCTTACTAGCCGAAATCCTGATCAAAGAAAAGAATCTTTGTGCATTAGTATCACTGTGTCCAAGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1
CDS TCA 72 bp AGGTGCATAACAAAGCCCATTAAAATTGCAAAATGCTaGTACCGAACAACTTTCGATTCAAATCCACTGCGA +
Preference number: 6 (lower is better)
Translates to: RCITKPIKIAKC*YRTTFDSNPLR
Trigger: TCGCAGTGGATTTGAATCGAAAGTTGTTCGGTATCAGCATTTTGCAATTTTAATGGGCTTTGTTATGCACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555087.1
CDS CAA 72 bp CAGGAGTTTAAAATGGAAGGCTGGTCTTTGTCTACCTaGGACACAGTGATACTAATGCACAAAGATTCTTTT +
Preference number: 6 (lower is better)
Translates to: QEFKMEGWSLST*DTVILMHKDSF
Trigger: AAAAGAATCTTTGTGCATTAGTATCACTGTGTCCAAGGTAGACAAAGACCAGCCTTCCATTTTAAACTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313833.5
ENST00000440021.1
ENST00000555280.1
ENST00000679934.1
ENST00000680658.1
ENST00000680682.1
ENST00000681074.1
ENST00000681400.1
ENST00000681904.1