Pregenerated sensors for FBXO3-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000254508Ensembl transcript IDs: ENST00000530352.1, ENST00000533046.5
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCTGTCTGGATTCCCCAAAGCCCCTTACACCATACTTGGCAAAGCTaGAGAGCAGACATCTTCGTGCCTCCATCAGTTATGCCCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SVWIPQSPLHHTWQS*RADIFVPPSVMPSG Trigger: CCCAGAGGGCATAACTGATGGAGGCACGAAGATGTCTGCTCTTCAGCTTTGCCAAGTATGGTGTAAGGGGCTTTGGGGAATCCAGACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530352.1 |
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| CDS TCA 90 bp | TCTGGATTCCCCAAAGCCCCTTACACCATACTACCTTGGCAAAGCTaGAGAGCAGACATCTTCGTGCCTCCATCAGTTATGCCCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SGFPKAPYTILPWQS*RADIFVPPSVMPSG Trigger: CCCAGAGGGCATAACTGATGGAGGCACGAAGATGTCTGCTCTTCAGCTTTGCCAAGGTAGTATGGTGTAAGGGGCTTTGGGGAATCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533046.5 |
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| CDS GCA 90 bp | CTTGGCAAAGCTGAAGAGCAGACATCTTCGTGCCTCCATCAGTTATaGCCTCTGGGAGTCTCAGTTCATCCCTTCACACGCGGGATACTT | + |
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Preference number: 5 (lower is better) Translates to: LGKAEEQTSSCLHQL*PLGVSVHPFTRGIL Trigger: AAGTATCCCGCGTGTGAAGGGATGAACTGAGACTCCCAGAGGGCATAACTGATGGAGGCACGAAGATGTCTGCTCTTCAGCTTTGCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530352.1 ENST00000533046.5 |
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| CDS GCA 90 bp | GCCCCTTACACCATACTTGGCAAAGCTGAAGAGCAGACATCTTCGTaGCTCCATCAGTTATGCCCTCTGGGAGTCTCAGTTCATCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: APYTILGKAEEQTSS*LHQLCPLGVSVHPF Trigger: GAAGGGATGAACTGAGACTCCCAGAGGGCATAACTGATGGAGGCACGAAGATGTCTGCTCTTCAGCTTTGCCAAGTATGGTGTAAGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530352.1 |
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| CDS GCA 90 bp | CTTACACCATACTACCTTGGCAAAGCTGAAGAGCAGACATCTTCGTaGCTCCATCAGTTATGCCCTCTGGGAGTCTCAGTTCATCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: LTPYYLGKAEEQTSS*LHQLCPLGVSVHPF Trigger: GAAGGGATGAACTGAGACTCCCAGAGGGCATAACTGATGGAGGCACGAAGATGTCTGCTCTTCAGCTTTGCCAAGGTAGTATGGTGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533046.5 |
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| CDS GCA 72 bp | GCTGAAGAGCAGACATCTTCGTGCCTCCATCAGTTATaGCCTCTGGGAGTCTCAGTTCATCCCTTCACACGC | + |
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Preference number: 6 (lower is better) Translates to: AEEQTSSCLHQL*PLGVSVHPFTR Trigger: GCGTGTGAAGGGATGAACTGAGACTCCCAGAGGGCATAACTGATGGAGGCACGAAGATGTCTGCTCTTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530352.1 ENST00000533046.5 |
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| CDS CAA 90 bp | GAAGTCCAGGTCTGTCTGGATTCCCCAAAGCCCCTTACACCATACTaGGCAAAGCTGAAGAGCAGACATCTTCGTGCCTCCATCAGTTAT | + |
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Preference number: 6 (lower is better) Translates to: EVQVCLDSPKPLTPY*AKLKSRHLRASISY Trigger: ATAACTGATGGAGGCACGAAGATGTCTGCTCTTCAGCTTTGCCAAGTATGGTGTAAGGGGCTTTGGGGAATCCAGACAGACCTGGACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530352.1 |
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| CDS CAA 90 bp | TCCAGGTCTGTCTGGATTCCCCAAAGCCCCTTACACCATACTACCTaGGCAAAGCTGAAGAGCAGACATCTTCGTGCCTCCATCAGTTAT | + |
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Preference number: 6 (lower is better) Translates to: SRSVWIPQSPLHHTT*AKLKSRHLRASISY Trigger: ATAACTGATGGAGGCACGAAGATGTCTGCTCTTCAGCTTTGCCAAGGTAGTATGGTGTAAGGGGCTTTGGGGAATCCAGACAGACCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533046.5 |
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| CDS TCA 72 bp | CCCAAAGCCCCTTACACCATACTACCTTGGCAAAGCTaGAGAGCAGACATCTTCGTGCCTCCATCAGTTATG | + |
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Preference number: 6 (lower is better) Translates to: PKAPYTILPWQS*RADIFVPPSVM Trigger: CATAACTGATGGAGGCACGAAGATGTCTGCTCTTCAGCTTTGCCAAGGTAGTATGGTGTAAGGGGCTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533046.5 |
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| CDS GCA 72 bp | ACCATACTTGGCAAAGCTGAAGAGCAGACATCTTCGTaGCTCCATCAGTTATGCCCTCTGGGAGTCTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: TILGKAEEQTSS*LHQLCPLGVSV Trigger: AACTGAGACTCCCAGAGGGCATAACTGATGGAGGCACGAAGATGTCTGCTCTTCAGCTTTGCCAAGTATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530352.1 |
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| CDS GCA 72 bp | TACTACCTTGGCAAAGCTGAAGAGCAGACATCTTCGTaGCTCCATCAGTTATGCCCTCTGGGAGTCTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: YYLGKAEEQTSS*LHQLCPLGVSV Trigger: AACTGAGACTCCCAGAGGGCATAACTGATGGAGGCACGAAGATGTCTGCTCTTCAGCTTTGCCAAGGTAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533046.5 |
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| CDS TCA 72 bp | ATTCCCCAAAGCCCCTTACACCATACTTGGCAAAGCTaGAGAGCAGACATCTTCGTGCCTCCATCAGTTATG | + |
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Preference number: 6 (lower is better) Translates to: IPQSPLHHTWQS*RADIFVPPSVM Trigger: CATAACTGATGGAGGCACGAAGATGTCTGCTCTTCAGCTTTGCCAAGTATGGTGTAAGGGGCTTTGGGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530352.1 |
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