RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO3 (Homo sapiens)

Ensembl gene IDs: ENSG00000110429

Ensembl transcript IDs: ENST00000265651.8, ENST00000448981.6, ENST00000526785.5, ENST00000526952.1, ENST00000529137.1, ENST00000530013.5, ENST00000530401.5, ENST00000531080.5, ENST00000532927.5, ENST00000533103.5, ENST00000534136.5

Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTTGGGGTGTCCCGTGATGTTGCAGTCCGATGGTAGCTGGAACTaGAGTCATCTCACGAGCTTCTTCATTCACATGTCTGGTACCCGC +
Preference number: 1 (lower is better)
Translates to: GLGCPVMLQSDGSWN*SHLTSFFIHMSGTR
Trigger: GCGGGTACCAGACATGTGAATGAAGAAGCTCGTGAGATGACTGCAGTTCCAGCTACCATCGGACTGCAACATCACGGGACACCCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 90 bp CCCCTCTCCCTGTTGTTCACTGCACTCCAGCTACACTGGCCTCCTTaGGTCAAGCACACCAAGCACATTACTGTTTCGGAACCTCCACAC +
Preference number: 1 (lower is better)
Translates to: PLSLLFTALQLHWPP*VKHTKHITVSEPPH
Trigger: GTGTGGAGGTTCCGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAGTGCAGTGAACAACAGGGAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR TCA 90 bp GTTTGGGAAGTATTCAGTGGGGTGGTTCTGGGTTGGGGTGTCCCGTaGTGTTGCAGTCCGATGGTAGCTGGAACTGCAGTCATCTCACGA +
Preference number: 1 (lower is better)
Translates to: VWEVFSGVVLGWGVP*CCSPMVAGTAVISR
Trigger: TCGTGAGATGACTGCAGTTCCAGCTACCATCGGACTGCAACATCACGGGACACCCCAACCCAGAACCACCCCACTGAATACTTCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 90 bp GGGGCTCCTGGGTGCCTCCCTCTATCTCTGTGTGATGTCTCTACATaGTCTCTTCTGCATGACGGCTTCATGGTAGCTGGACTTCTTACA +
Preference number: 1 (lower is better)
Translates to: GAPGCLPLSLCDVST*SLLHDGFMVAGLLT
Trigger: TGTAAGAAGTCCAGCTACCATGAAGCCGTCATGCAGAAGAGACCATGTAGAGACATCACACAGAGATAGAGGGAGGCACCCAGGAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 90 bp TCTTCATTCACATGTCTGGTACCCGCGCAGGATGATCCAAATATCTaGAGTCTGAAACAGCTGGGGCTCCTGGGTGCCTCCCTCTATCTC +
Preference number: 1 (lower is better)
Translates to: SSFTCLVPAQDDPNI*SLKQLGLLGASLYL
Trigger: GAGATAGAGGGAGGCACCCAGGAGCCCCAGCTGTTTCAGACTCCAGATATTTGGATCATCCTGCGCGGGTACCAGACATGTGAATGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 90 bp GAACAGCAAGGACCTACTTGGTATTCTGGAAAGTATGGGGCAACTTaGGGCGTGATGTCAGCCAGAGTCCTTCCACCAAGGCTTTTATGG +
Preference number: 1 (lower is better)
Translates to: EQQGPTWYSGKYGAT*GVMSARVLPPRLLW
Trigger: CCATAAAAGCCTTGGTGGAAGGACTCTGGCTGACATCACGCCCCAAGTTGCCCCATACTTTCCAGAATACCAAGTAGGTCCTTGCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 90 bp TTATCTCTCATGGTTCATGTGGGTTGGTGTTTGGGAAGTATTCAGTaGGGTGGTTCTGGGTTGGGGTGTCCCGTGATGTTGCAGTCCGAT +
Preference number: 1 (lower is better)
Translates to: LSLMVHVGWCLGSIQ*GGSGLGCPVMLQSD
Trigger: ATCGGACTGCAACATCACGGGACACCCCAACCCAGAACCACCCCACTGAATACTTCCCAAACACCAACCCACATGAACCATGAGAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR GCA 90 bp GTCCATTGTGAATTCGGTATGAACATCGATAATCGTCAGGAAGCTTaGAGCCAATCTGCGCTTCCACAGCATCGAGGTCTTCCTCTCGAG +
Preference number: 1 (lower is better)
Translates to: VHCEFGMNIDNRQEA*SQSALPQHRGLPLE
Trigger: CTCGAGAGGAAGACCTCGATGCTGTGGAAGCGCAGATTGGCTGCAAGCTTCCTGACGATTATCGATGTTCATACCGAATTCACAATGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529137.1
3UTR CCA 90 bp TCTCTTCTGCATGACGGCTTCATGGTAGCTGGACTTCTTACATGGTaGCTCAGGGTGTCAAAGACACATGTCCCAGGAGAGAAAGACAGA +
Preference number: 1 (lower is better)
Translates to: SLLHDGFMVAGLLTW*LRVSKTHVPGEKDR
Trigger: TCTGTCTTTCTCTCCTGGGACATGTGTCTTTGACACCCTGAGCCACCATGTAAGAAGTCCAGCTACCATGAAGCCGTCATGCAGAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 90 bp TTGAAACAGCAACAGTCATTATTATCTCTCATGGTTCATGTGGGTTaGTGTTTGGGAAGTATTCAGTGGGGTGGTTCTGGGTTGGGGTGT +
Preference number: 1 (lower is better)
Translates to: LKQQQSLLSLMVHVG*CLGSIQWGGSGLGC
Trigger: ACACCCCAACCCAGAACCACCCCACTGAATACTTCCCAAACACCAACCCACATGAACCATGAGAGATAATAATGACTGTTGCTGTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR GCA 90 bp CAAGATTCCAAAGGATCAAGTCGACCCAATAGTAACTCAACTGCCTaGCAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAAT +
Preference number: 1 (lower is better)
Translates to: QDSKGSSRPNSNSTA*QNTPQCSLNFRTRN
Trigger: ATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTGGCAGGCAGTTGAGTTACTATTGGGTCGACTTGATCCTTTGGAATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR TCA 90 bp CTATGGAGCCTCATTTACTTGTCCATTTCTCTCAACAAATTCACATaGCCCCCAAGATACTTTCTCAAAATCTCTAGGGTTCTCTGGAAC +
Preference number: 1 (lower is better)
Translates to: LWSLIYLSISLNKFT*PPRYFLKISRVLWN
Trigger: GTTCCAGAGAACCCTAGAGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
3UTR CCA 90 bp AAACAACCAGACACGCCAAATATGAATTTCCATAGACTTGAACAGTaGATTCTCACAACACACATGCTGATGCAAGATTCTGGAGTGGAT +
Preference number: 1 (lower is better)
Translates to: KQPDTPNMNFHRLEQ*ILTTHMLMQDSGVD
Trigger: ATCCACTCCAGAATCTTGCATCAGCATGTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTCTGGTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR GCA 90 bp AGTCGACCCAATAGTAACTCAACTGCCTGCCAAAACACACCTCAATaGTCTTTGAACTTTAGGACAAGGAATATTATCAGCGATAAAGAT +
Preference number: 1 (lower is better)
Translates to: SRPNSNSTACQNTPQ*SLNFRTRNIISDKD
Trigger: ATCTTTATCGCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTGGCAGGCAGTTGAGTTACTATTGGGTCGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR CCA 90 bp CAGATTAGGACAGTAGTGATGTTGAACATGCATCTGAATATCTCTTaGAAATGTCAATTCTGCCCATGCAATGTCTGTAATCAAGCCATG +
Preference number: 1 (lower is better)
Translates to: QIRTVVMLNMHLNIS*KCQFCPCNVCNQAM
Trigger: CATGGCTTGATTACAGACATTGCATGGGCAGAATTGACATTTCCAAGAGATATTCAGATGCATGTTCAACATCACTACTGTCCTAATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR TCA 90 bp CCAATAGTAACTCAACTGCCTGCCAAAACACACCTCAATGCTCTTTaGACTTTAGGACAAGGAATATTATCAGCGATAAAGATGGAGATT +
Preference number: 1 (lower is better)
Translates to: PIVTQLPAKTHLNAL*TLGQGILSAIKMEI
Trigger: AATCTCCATCTTTATCGCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTGGCAGGCAGTTGAGTTACTATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR TCA 90 bp TCTGCTCCTTTCACGTTTCAGCTTAAATGTCACCAAGGCCTCTCCTaGCACATCTTTATATTAGAACAACCTAACAATACGTTCTTTATC +
Preference number: 1 (lower is better)
Translates to: SAPFTFQLKCHQGLS*HIFILEQPNNTFFI
Trigger: GATAAAGAACGTATTGTTAGGTTGTTCTAATATAAAGATGTGTCAGGAGAGGCCTTGGTGACATTTAAGCTGAAACGTGAAAGGAGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CAA 90 bp GGAAGTATTCAGTGGGGTGGTTCTGGGTTGGGGTGTCCCGTGATGTaGCAGTCCGATGGTAGCTGGAACTGCAGTCATCTCACGAGCTTC +
Preference number: 2 (lower is better)
Translates to: GSIQWGGSGLGCPVM*QSDGSWNCSHLTSF
Trigger: GAAGCTCGTGAGATGACTGCAGTTCCAGCTACCATCGGACTGCAACATCACGGGACACCCCAACCCAGAACCACCCCACTGAATACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CAA 90 bp CAGCAACAGTCATTATTATCTCTCATGGTTCATGTGGGTTGGTGTTaGGGAAGTATTCAGTGGGGTGGTTCTGGGTTGGGGTGTCCCGTG +
Preference number: 2 (lower is better)
Translates to: QQQSLLSLMVHVGWC*GSIQWGGSGLGCPV
Trigger: CACGGGACACCCCAACCCAGAACCACCCCACTGAATACTTCCCAAACACCAACCCACATGAACCATGAGAGATAATAATGACTGTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR-3UTR CCA 90 bp CTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAAGCACATTACTGTTTCGACAGCAGAAATTCTCTaGTTAGAGACTATGGAGCCT +
Preference number: 2 (lower is better)
Translates to: LQLHWPPWVKHTKHITVSTAEIL*LETMEP
Trigger: AGGCTCCATAGTCTCTAACCAGAGAATTTCTGCTGT...CGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR-3UTR GCA 90 bp CCCTGTTGTTCACTGCACTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCATATAAACTAACTATTTaGCTGGCTTATCTGCAGTGT +
Preference number: 2 (lower is better)
Translates to: PCCSLHSSYTGLLGSSTPYKLTI*LAYLQC
Trigger: ACACTGCAGATAAGCCAGGCAAATAGTTAGTTTATA...TGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAGTGCAGTGAACAACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CAA 90 bp CTTGAAACAGCAACAGTCATTATTATCTCTCATGGTTCATGTGGGTaGGTGTTTGGGAAGTATTCAGTGGGGTGGTTCTGGGTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: LETATVIIISHGSCG*VFGKYSVGWFWVGV
Trigger: CACCCCAACCCAGAACCACCCCACTGAATACTTCCCAAACACCAACCCACATGAACCATGAGAGATAATAATGACTGTTGCTGTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR-3UTR TCA 90 bp CTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAAGCACATTACTGTTTCGATTACAAGGGAAATCTaGCACTATTTTGAACTACGC +
Preference number: 2 (lower is better)
Translates to: LQLHWPPWVKHTKHITVSITREI*HYFELR
Trigger: GCGTAGTTCAAAATAGTGTCAGATTTCCCTTGTAAT...CGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR-3UTR TCA 90 bp AACTTCTTCCACGTCACCCTTAGCATTTGTTATTCTCCAATAGCGACTGTCCAAGATGGGGAAGCCACCTaGTACAACATTTTTGACATA +
Preference number: 2 (lower is better)
Translates to: NFFHVTLSICYSPIATVQDGEAT*YNIFDI
Trigger: TATGTCAAAAATGTTGTATCAGGTGGCTTCCCCATC...TTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532927.5
3UTR-3UTR GCA 90 bp ACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAAAGATTCAACAAAGGAATTCTGTTATaGAAAGCAGCAAATTCCCAG +
Preference number: 2 (lower is better)
Translates to: THPSGSFQKLEGIFQRFNKGILL*KAANSQ
Trigger: CTGGGAATTTGCTGCTTTGCATAACAGAATTCCTTT...GTTGAATCTTTGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR-3UTR GCA 90 bp AACTTCTTCCACGTCACCCTTAGCATTTGTTATTCTCCAATAGCGACTGTCCAAAATATCCCCAGTTGTTaGTACACATTCTGGATCGTG +
Preference number: 2 (lower is better)
Translates to: NFFHVTLSICYSPIATVQNIPSC*YTFWIV
Trigger: CACGATCCAGAATGTGTAGCAACAACTGGGGATATT...TTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532927.5
3UTR-3UTR TCA 90 bp AACTTCTTCCACGTCACCCTTAGCATTTGTTATTCTCCAATAGCGACTGTCCAAAGGAAGTGCATCTTTTaGCATTTCAATCCTGATTCG +
Preference number: 2 (lower is better)
Translates to: NFFHVTLSICYSPIATVQRKCIF*HFNPDS
Trigger: CGAATCAGGATTGAAATGTCAAAAGATGCACTTCCT...TTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532927.5
3UTR-3UTR GCA 90 bp CTACGAATTAATCAGACTGGTAGAGGACGAAAAAGCAGAACAATTCTCCATATCAGTAACTCAACTGCCTaGCAAAACACACCTCAATGC +
Preference number: 2 (lower is better)
Translates to: LRINQTGRGRKSRTILHISNSTA*QNTPQC
Trigger: GCATTGAGGTGTGTTTTGGCAGGCAGTTGAGTTACT...GATATGGAGAATTGTTCTGCTTTTTCGTCCTCTACCAGTCTGATTAATTCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR-3UTR TCA 90 bp CAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTATCAGCGATCTCAACAAATTCACATaGCCCCCAAGATACTTTCTC +
Preference number: 2 (lower is better)
Translates to: QNTPQCSLNFRTRNIISDLNKFT*PPRYFL
Trigger: GAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAG...ATCGCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR-3UTR TCA 90 bp AAATCTTCACTTCCAAACGCACACTGTAGATTCTTTTCACTAGATATGCCACACTTTTCAAACTGGAGTTaGAAATGTGTCAGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: KSSLPNAHCRFFSLDMPHFSNWS*KCVSSG
Trigger: TCCAGAGCTGACACATTTTCAACTCCAGTTTGAAAA...GTGTGGCATATCTAGTGAAAAGAATCTACAGTGTGCGTTTGGAAGTGAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR-3UTR TCA 90 bp ACTGCCTGCCAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTACACATCAAAACTTGTaGAATGCAGCTAAAACAGTG +
Preference number: 2 (lower is better)
Translates to: TACQNTPQCSLNFRTRNITHQNL*NAAKTV
Trigger: CACTGTTTTAGCTGCATTTCACAAGTTTTGATGTGT...AATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTGGCAGGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR-3UTR GCA 90 bp TGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTTTTGCCTGGCTTATCTaGAGTGTTAACCCTACAAAG +
Preference number: 2 (lower is better)
Translates to: CPFLSTNSHDPQDTFSKSFAWLI*SVNPTK
Trigger: CTTTGTAGGGTTAACACTGCAGATAAGCCAGGCAAA...AGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
3UTR-3UTR TCA 90 bp CAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTATCAGCGATCAGCTTCAAAATACATaGAGCAAACCTGACAGAACT +
Preference number: 2 (lower is better)
Translates to: QNTPQCSLNFRTRNIISDQLQNT*SKPDRT
Trigger: AGTTCTGTCAGGTTTGCTTCATGTATTTTGAAGCTG...ATCGCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR-3UTR TCA 90 bp CAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTATCAGCGATATTACAAGGGAAATCTaGCACTATTTTGAACTACGC +
Preference number: 2 (lower is better)
Translates to: QNTPQCSLNFRTRNIISDITREI*HYFELR
Trigger: GCGTAGTTCAAAATAGTGTCAGATTTCCCTTGTAAT...ATCGCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR-3UTR GCA 90 bp ATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCCATTTCTCTCAACAATATAAACTAACTATTTaGCTGGCTTATCTGCAGTGT +
Preference number: 2 (lower is better)
Translates to: ILWLETMEPHLLVHFSQQYKLTI*LAYLQC
Trigger: ACACTGCAGATAAGCCAGGCAAATAGTTAGTTTATA...TTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
3UTR-3UTR GCA 90 bp CAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTATCAGCGATAAAGGAATTCTGTTATaGAAAGCAGCAAATTCCCAG +
Preference number: 2 (lower is better)
Translates to: QNTPQCSLNFRTRNIISDKGILL*KAANSQ
Trigger: CTGGGAATTTGCTGCTTTGCATAACAGAATTCCTTT...ATCGCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR-3UTR CCA 90 bp AAATCTTCACTTCCAAACGCACACTGTAGATTCTTTTCACTAGATATGCCACACTCCCCATTGTATAACTaGAGCTTCATAACTTTCTTT +
Preference number: 2 (lower is better)
Translates to: KSSLPNAHCRFFSLDMPHSPLYN*SFITFF
Trigger: AAAGAAAGTTATGAAGCTCCAGTTATACAATGGGGA...GTGTGGCATATCTAGTGAAAAGAATCTACAGTGTGCGTTTGGAAGTGAAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR-3UTR CCA 90 bp TTTAAAACAGCAGAAATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCTCCCCATTGTATAACTaGAGCTTCATAACTTTCTTT +
Preference number: 2 (lower is better)
Translates to: FKTAEILWLETMEPHLLVSPLYN*SFITFF
Trigger: AAAGAAAGTTATGAAGCTCCAGTTATACAATGGGGA...GACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAATTTCTGCTGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR TCA 72 bp TGGTACCCGCGCAGGATGATCCAAATATCTGGAGTCTaGAACAGCTGGGGCTCCTGGGTGCCTCCCTCTATC +
Preference number: 3 (lower is better)
Translates to: WYPRRMIQISGV*NSWGSWVPPSI
Trigger: GATAGAGGGAGGCACCCAGGAGCCCCAGCTGTTTCAGACTCCAGATATTTGGATCATCCTGCGCGGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 72 bp GGGTTGGTGTTTGGGAAGTATTCAGTGGGGTGGTTCTaGGTTGGGGTGTCCCGTGATGTTGCAGTCCGATGG +
Preference number: 3 (lower is better)
Translates to: GLVFGKYSVGWF*VGVSRDVAVRW
Trigger: CCATCGGACTGCAACATCACGGGACACCCCAACCCAGAACCACCCCACTGAATACTTCCCAAACACCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 72 bp GGACCTACTTGGTATTCTGGAAAGTATGGGGCAACTTaGGGCGTGATGTCAGCCAGAGTCCTTCCACCAAGG +
Preference number: 3 (lower is better)
Translates to: GPTWYSGKYGAT*GVMSARVLPPR
Trigger: CCTTGGTGGAAGGACTCTGGCTGACATCACGCCCCAAGTTGCCCCATACTTTCCAGAATACCAAGTAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 72 bp CATGACGGCTTCATGGTAGCTGGACTTCTTACATGGTaGCTCAGGGTGTCAAAGACACATGTCCCAGGAGAG +
Preference number: 3 (lower is better)
Translates to: HDGFMVAGLLTW*LRVSKTHVPGE
Trigger: CTCTCCTGGGACATGTGTCTTTGACACCCTGAGCCACCATGTAAGAAGTCCAGCTACCATGAAGCCGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 72 bp ATGGTTCATGTGGGTTGGTGTTTGGGAAGTATTCAGTaGGGTGGTTCTGGGTTGGGGTGTCCCGTGATGTTG +
Preference number: 3 (lower is better)
Translates to: MVHVGWCLGSIQ*GGSGLGCPVML
Trigger: CAACATCACGGGACACCCCAACCCAGAACCACCCCACTGAATACTTCCCAAACACCAACCCACATGAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 72 bp CTGTTGTTCACTGCACTCCAGCTACACTGGCCTCCTTaGGTCAAGCACACCAAGCACATTACTGTTTCGGAA +
Preference number: 3 (lower is better)
Translates to: LLFTALQLHWPP*VKHTKHITVSE
Trigger: TTCCGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAGTGCAGTGAACAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR TCA 72 bp AGCTTCTTCATTCACATGTCTGGTACCCGCGCAGGATaGTCCAAATATCTGGAGTCTGAAACAGCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: SFFIHMSGTRAG*SKYLESETAGA
Trigger: AGCCCCAGCTGTTTCAGACTCCAGATATTTGGATCATCCTGCGCGGGTACCAGACATGTGAATGAAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR GCA 72 bp TGTCCCGTGATGTTGCAGTCCGATGGTAGCTGGAACTaGAGTCATCTCACGAGCTTCTTCATTCACATGTCT +
Preference number: 3 (lower is better)
Translates to: CPVMLQSDGSWN*SHLTSFFIHMS
Trigger: AGACATGTGAATGAAGAAGCTCGTGAGATGACTGCAGTTCCAGCTACCATCGGACTGCAACATCACGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR-3UTR CAA 90 bp GACACGCCAAATATGAATTTCCATAGACTTGAACAGTGGATTCTCACAACACACTGGGGTGGTTCTGGGTaGGGGTGTCCCGTGATGTTG +
Preference number: 3 (lower is better)
Translates to: DTPNMNFHRLEQWILTTHWGGSG*GCPVML
Trigger: CAACATCACGGGACACCCCAACCCAGAACCACCCCA...GTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR GCA 72 bp GAATTCGGTATGAACATCGATAATCGTCAGGAAGCTTaGAGCCAATCTGCGCTTCCACAGCATCGAGGTCTT +
Preference number: 3 (lower is better)
Translates to: EFGMNIDNRQEA*SQSALPQHRGL
Trigger: AAGACCTCGATGCTGTGGAAGCGCAGATTGGCTGCAAGCTTCCTGACGATTATCGATGTTCATACCGAATTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529137.1
3UTR CCA 72 bp CATTATTATCTCTCATGGTTCATGTGGGTTGGTGTTTaGGAAGTATTCAGTGGGGTGGTTCTGGGTTGGGGT +
Preference number: 3 (lower is better)
Translates to: HYYLSWFMWVGV*EVFSGVVLGWG
Trigger: ACCCCAACCCAGAACCACCCCACTGAATACTTCCCAAACACCAACCCACATGAACCATGAGAGATAATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 72 bp TACATTGAACAGAATTCTGAACAGCAAGGACCTACTTaGTATTCTGGAAAGTATGGGGCAACTTGGGGCGTG +
Preference number: 3 (lower is better)
Translates to: YIEQNSEQQGPT*YSGKYGATWGV
Trigger: CACGCCCCAAGTTGCCCCATACTTTCCAGAATACCAAGTAGGTCCTTGCTGTTCAGAATTCTGTTCAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 72 bp CAACAGTCATTATTATCTCTCATGGTTCATGTGGGTTaGTGTTTGGGAAGTATTCAGTGGGGTGGTTCTGGG +
Preference number: 3 (lower is better)
Translates to: QQSLLSLMVHVG*CLGSIQWGGSG
Trigger: CCCAGAACCACCCCACTGAATACTTCCCAAACACCAACCCACATGAACCATGAGAGATAATAATGACTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR TCA 72 bp GTCAATTCTGCCCATGCAATGTCTGTAATCAAGCCATaGCTTACTCTGCTGTCAATGTTCTCTCTCACACAT +
Preference number: 3 (lower is better)
Translates to: VNSAHAMSVIKP*LTLLSMFSLTH
Trigger: ATGTGTGAGAGAGAACATTGACAGCAGAGTAAGTCATGGCTTGATTACAGACATTGCATGGGCAGAATTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 72 bp AACAGCAACAGTCATTATTATCTCTCATGGTTCATGTaGGTTGGTGTTTGGGAAGTATTCAGTGGGGTGGTT +
Preference number: 3 (lower is better)
Translates to: NSNSHYYLSWFM*VGVWEVFSGVV
Trigger: AACCACCCCACTGAATACTTCCCAAACACCAACCCACATGAACCATGAGAGATAATAATGACTGTTGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR-3UTR CAA 90 bp CTACGAATTAATCAGACTGGTAGAGGACGAAAAAGCAGAACAATTCTCCATATCCTTTTCAAACTGGAGTaGAAAATGTGTCAGCTCTGG +
Preference number: 3 (lower is better)
Translates to: LRINQTGRGRKSRTILHILFKLE*KMCQLW
Trigger: CCAGAGCTGACACATTTTCAACTCCAGTTTGAAAAG...GATATGGAGAATTGTTCTGCTTTTTCGTCCTCTACCAGTCTGATTAATTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR TCA 72 bp ACTCAACTGCCTGCCAAAACACACCTCAATGCTCTTTaGACTTTAGGACAAGGAATATTATCAGCGATAAAG +
Preference number: 3 (lower is better)
Translates to: TQLPAKTHLNAL*TLGQGILSAIK
Trigger: CTTTATCGCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTGGCAGGCAGTTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR TCA 72 bp ATAGACTTGAACAGTGGATTCTCACAACACACATGCTaGTGCAAGATTCTGGAGTGGATTCTATATCTTGTG +
Preference number: 3 (lower is better)
Translates to: IDLNSGFSQHTC*CKILEWILYLV
Trigger: CACAAGATATAGAATCCACTCCAGAATCTTGCATCAGCATGTGTGTTGTGAGAATCCACTGTTCAAGTCTAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CCA 72 bp AAAGCAGCAAATTCCCAGTACTGGAAATACAGTTTCTaGCATTCCTCCACTGGGAAGAAATCTAAATCTTCA +
Preference number: 3 (lower is better)
Translates to: KAANSQYWKYSF*HSSTGKKSKSS
Trigger: TGAAGATTTAGATTTCTTCCCAGTGGAGGAATGCCAGAAACTGTATTTCCAGTACTGGGAATTTGCTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR CCA 72 bp GACACGCCAAATATGAATTTCCATAGACTTGAACAGTaGATTCTCACAACACACATGCTGATGCAAGATTCT +
Preference number: 3 (lower is better)
Translates to: DTPNMNFHRLEQ*ILTTHMLMQDS
Trigger: AGAATCTTGCATCAGCATGTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR-3UTR CAA 90 bp GACACGCCAAATATGAATTTCCATAGACTTGAACAGTGGATTCTCACAACACACATCATCTCTCACTTGTaGATAGGACAAAGACCAAAA +
Preference number: 3 (lower is better)
Translates to: DTPNMNFHRLEQWILTTHIISHL*IGQRPK
Trigger: TTTTGGTCTTTGTCCTATCAACAAGTGAGAGATGAT...GTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR TCA 72 bp GTTTTTAGAGTTTCAGGGGGTCATGAGACTGAAAGTTaGCAACCACCGTCCTTAAATAAAGACAACTTTACA +
Preference number: 3 (lower is better)
Translates to: VFRVSGGHETES*QPPSLNKDNFT
Trigger: TGTAAAGTTGTCTTTATTTAAGGACGGTGGTTGTCAACTTTCAGTCTCATGACCCCCTGAAACTCTAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR TCA 72 bp TTCACGTTTCAGCTTAAATGTCACCAAGGCCTCTCCTaGCACATCTTTATATTAGAACAACCTAACAATACG +
Preference number: 3 (lower is better)
Translates to: FTFQLKCHQGLS*HIFILEQPNNT
Trigger: CGTATTGTTAGGTTGTTCTAATATAAAGATGTGTCAGGAGAGGCCTTGGTGACATTTAAGCTGAAACGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR GCA 72 bp AATAGTAACTCAACTGCCTGCCAAAACACACCTCAATaGTCTTTGAACTTTAGGACAAGGAATATTATCAGC +
Preference number: 3 (lower is better)
Translates to: NSNSTACQNTPQ*SLNFRTRNIIS
Trigger: GCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTGGCAGGCAGTTGAGTTACTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR GCA 72 bp AACATGCATCTGAATATCTCTTGGAAATGTCAATTCTaGCCATGCAATGTCTGTAATCAAGCCATGACTTAC +
Preference number: 3 (lower is better)
Translates to: NMHLNISWKCQF*PCNVCNQAMTY
Trigger: GTAAGTCATGGCTTGATTACAGACATTGCATGGGCAGAATTGACATTTCCAAGAGATATTCAGATGCATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR-3UTR CAA 90 bp CAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTATCAGCGATTGGAGCCTCATTTACTaGTCCATTTCTCTCAACAAA +
Preference number: 3 (lower is better)
Translates to: QNTPQCSLNFRTRNIISDWSLIY*SISLNK
Trigger: TTTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCA...ATCGCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR-3UTR CAA 90 bp CAGACTGGTAGAGGACGAAAAAGCAGAACAATTCTCCATATCAGAAAACTAATAACAATCATCTCTCACTaGTTGATAGGACAAAGACCA +
Preference number: 3 (lower is better)
Translates to: QTGRGRKSRTILHIRKLITIISH*LIGQRP
Trigger: TGGTCTTTGTCCTATCAACAAGTGAGAGATGATTGT...TATTAGTTTTCTGATATGGAGAATTGTTCTGCTTTTTCGTCCTCTACCAGTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR-3UTR CAA 90 bp CAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTATCAGCGATGAATGGACAAATTCCTaGAAAGGCACAAATTACCAA +
Preference number: 3 (lower is better)
Translates to: QNTPQCSLNFRTRNIISDEWTNS*KGTNYQ
Trigger: TTGGTAATTTGTGCCTTTCAAGGAATTTGTCCATTC...ATCGCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
3UTR-3UTR CAA 90 bp CAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTATCAGCGATATCATCTCTCACTTGTaGATAGGACAAAGACCAAAA +
Preference number: 3 (lower is better)
Translates to: QNTPQCSLNFRTRNIISDIISHL*IGQRPK
Trigger: TTTTGGTCTTTGTCCTATCAACAAGTGAGAGATGAT...ATCGCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR GCA 90 bp CCCTGTTGTTCACTGCACTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAGCTGGGGCTCCTGGGTaGCTCCCTCTATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PCCSLHSSYTGLLGSSTPAGAPG*LPLSLC
Trigger: ACACAGAGATAGAGGGAGGCACCCAGGAGCCCCAGC...TGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAGTGCAGTGAACAACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CAA 72 bp CAGTGGGGTGGTTCTGGGTTGGGGTGTCCCGTGATGTaGCAGTCCGATGGTAGCTGGAACTGCAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: QWGGSGLGCPVM*QSDGSWNCSHL
Trigger: GAGATGACTGCAGTTCCAGCTACCATCGGACTGCAACATCACGGGACACCCCAACCCAGAACCACCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp CTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAAGCACATTACTGTTTCGAACAGCTGGGGCTCCTaGGTGCCTCCCTCTATCTCT +
Preference number: 4 (lower is better)
Translates to: LQLHWPPWVKHTKHITVSNSWGS*VPPSIS
Trigger: AGAGATAGAGGGAGGCACCCAGGAGCCCCAGCTGTT...CGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CAA 72 bp TGGTGTTTGGGAAGTATTCAGTGGGGTGGTTCTGGGTaGGGGTGTCCCGTGATGTTGCAGTCCGATGGTAGC +
Preference number: 4 (lower is better)
Translates to: WCLGSIQWGGSG*GCPVMLQSDGS
Trigger: GCTACCATCGGACTGCAACATCACGGGACACCCCAACCCAGAACCACCCCACTGAATACTTCCCAAACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp AGGTCTTCCTCTCGAGCACCCTATAAACTCTTCCAGGGAACAGAAAAAGAGGCAGGAGCAGGGGATCGGTaGGCAGCGACTCTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RSSSRAPYKLFQGTEKEAGAGDR*AATLGS
Trigger: TGACCCTAGAGTCGCTGCCCACCGATCCCCTGCTCC...TGCCTCTTTTTCTGTTCCCTGGAAGAGTTTATAGGGTGCTCGAGAGGAAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529137.1
3UTR CAA 72 bp CCTGTTGTTCACTGCACTCCAGCTACACTGGCCTCCTaGGGTCAAGCACACCAAGCACATTACTGTTTCGGA +
Preference number: 4 (lower is better)
Translates to: PVVHCTPATLAS*GQAHQAHYCFG
Trigger: TCCGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAGTGCAGTGAACAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CAA 72 bp AGGACCTACTTGGTATTCTGGAAAGTATGGGGCAACTaGGGGCGTGATGTCAGCCAGAGTCCTTCCACCAAG +
Preference number: 4 (lower is better)
Translates to: RTYLVFWKVWGN*GRDVSQSPSTK
Trigger: CTTGGTGGAAGGACTCTGGCTGACATCACGCCCCAAGTTGCCCCATACTTTCCAGAATACCAAGTAGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR TCA 90 bp AGCCAATCTGCGCTTCCACAGCATCGAGGTCTTCCTCTCGAGCACCCTATAAACCTCCACAGCGGATCATaGCTTGATAGCTGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: SQSALPQHRGLPLEHPINLHSGS*LDSWLS
Trigger: ACTTAGCCAGCTATCAAGTCATGATCCGCTGTGGAG...GTTTATAGGGTGCTCGAGAGGAAGACCTCGATGCTGTGGAAGCGCAGATTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529137.1
CDS-3UTR GCA 90 bp AACTTCTTCCACGTCACCCTTAGCATTTGTTATTCTCCAATAGCGACTGTCCAACCATGGCCGCCATCTTaGCTGGCCCGGTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: NFFHVTLSICYSPIATVQPWPPS*LARCRS
Trigger: AGACCTGCACCGGGCCAGGCAAGATGGCGGCCATGG...TTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR GCA 90 bp AGCCAATCTGCGCTTCCACAGCATCGAGGTCTTCCTCTCGAGCACCCTATAAACAATCGTCAGGAAGCTTaGAGCCAATCTGCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SQSALPQHRGLPLEHPINNRQEA*SQSALP
Trigger: TGGAAGCGCAGATTGGCTGCAAGCTTCCTGACGATT...GTTTATAGGGTGCTCGAGAGGAAGACCTCGATGCTGTGGAAGCGCAGATTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529137.1
CDS-3UTR CCA 90 bp AACTATTTGCCTGGCTTATCTGCAGTGTTAACCCTACAAAGTCATGTAAATCAGGGCCGCCATCTTGCCTaGCCCGGTGCAGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: NYLPGLSAVLTLQSHVNQGRHLA*PGAGLA
Trigger: GGCCAGACCTGCACCGGGCCAGGCAAGATGGCGGCC...CTGATTTACATGACTTTGTAGGGTTAACACTGCAGATAAGCCAGGCAAATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448981.6
CDS-3UTR CCA 90 bp CTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAAGCACATTACTGTTTCGCGGCTTCATGGTAGCTaGACTTCTTACATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LQLHWPPWVKHTKHITVSRLHGS*TSYMVA
Trigger: AGCCACCATGTAAGAAGTCCAGCTACCATGAAGCCG...CGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp GACACGCCAAATATGAATTTCCATAGACTTGAACAGTGGATTCTCACAACACACCCGTCTCGGTCTCCATaGCCGCCATCTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: DTPNMNFHRLEQWILTTHPSRSP*PPSCLA
Trigger: GGCCAGGCAAGATGGCGGCCATGGAGACCGAGACGG...GTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp CACAGTAATATCCCCAGTTGTTGCTACACATTCTGGATCGTGAACATATCTGAACCGTCTCGGTCTCCATaGCCGCCATCTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: HSNIPSCCYTFWIVNISEPSRSP*PPSCLA
Trigger: GGCCAGGCAAGATGGCGGCCATGGAGACCGAGACGG...TTCAGATATGTTCACGATCCAGAATGTGTAGCAACAACTGGGGATATTACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR TCA 90 bp CGTCAGGAAGCTTGCAGCCAATCTGCGCTTCCACAGCATCGAGGTCTTCCTCTCATTGTGAATTCGGTATaGACATCGATAATCGTCAGG +
Preference number: 4 (lower is better)
Translates to: RQEACSQSALPQHRGLPLIVNSV*TSIIVR
Trigger: CCTGACGATTATCGATGTTCATACCGAATTCACAAT...GAGAGGAAGACCTCGATGCTGTGGAAGCGCAGATTGGCTGCAAGCTTCCTGACG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529137.1
CDS-3UTR TCA 90 bp CCCTGTTGTTCACTGCACTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAATTGTGAATTCGGTATaGACATCGATAATCGTCAGG +
Preference number: 4 (lower is better)
Translates to: PCCSLHSSYTGLLGSSTPIVNSV*TSIIVR
Trigger: CCTGACGATTATCGATGTTCATACCGAATTCACAAT...TGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAGTGCAGTGAACAACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR GCA 90 bp ACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAAAGATTCAACTTCAGTCCCTGTCTCTaGTGGAATCCTCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: THPSGSFQKLEGIFQRFNFSPCL*WNPPAA
Trigger: AGCTGCCGGAGGATTCCAGCAGAGACAGGGACTGAA...GTTGAATCTTTGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR GCA 90 bp CTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAAGCACATTACTGTTTCGAGTAACTCAACTGCCTaGCAAAACACACCTCAATGC +
Preference number: 4 (lower is better)
Translates to: LQLHWPPWVKHTKHITVSSNSTA*QNTPQC
Trigger: GCATTGAGGTGTGTTTTGGCAGGCAGTTGAGTTACT...CGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp CCAAACTTAAACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCACTACACTGGCCTCCTTaGGTCAAGCACACCAAGCAC +
Preference number: 4 (lower is better)
Translates to: PNLNPSIRVIPEARGHFPLHWPP*VKHTKH
Trigger: GTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAG...TGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGTTTAAGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp CTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAAGCACATTACTGTTTCGAAGATCAACCCACACTaGAAGGAAATGACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LQLHWPPWVKHTKHITVSKINPH*KEMTAS
Trigger: AGAGGCTGTCATTTCCTTCCAGTGTGGGTTGATCTT...CGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR TCA 90 bp CTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAAGCACATTACTGTTTCGCTCAACAAATTCACATaGCCCCCAAGATACTTTCTC +
Preference number: 4 (lower is better)
Translates to: LQLHWPPWVKHTKHITVSLNKFT*PPRYFL
Trigger: GAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAG...CGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR TCA 90 bp CCCTGTTGTTCACTGCACTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAACACATCAAAACTTGTaGAATGCAGCTAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: PCCSLHSSYTGLLGSSTPTHQNL*NAAKTV
Trigger: CACTGTTTTAGCTGCATTTCACAAGTTTTGATGTGT...TGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAGTGCAGTGAACAACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR TCA 90 bp CCAAACTTAAACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCACAAATATCTGGAGTCTaGAACAGCTGGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PNLNPSIRVIPEARGHFPQISGV*NSWGSW
Trigger: CCAGGAGCCCCAGCTGTTTCAGACTCCAGATATTTG...TGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGTTTAAGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR GCA 90 bp TGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTCCATGGCCGCCATCTTaGCTGGCCCGGTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: CPFLSTNSHDPQDTFSKSPWPPS*LARCRS
Trigger: AGACCTGCACCGGGCCAGGCAAGATGGCGGCCATGG...AGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448981.6
CDS-3UTR GCA 90 bp GACACGCCAAATATGAATTTCCATAGACTTGAACAGTGGATTCTCACAACACACGGGACTACAGGTGCATaGGACCCAGCCCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: DTPNMNFHRLEQWILTTHGTTGA*DPAQLS
Trigger: ACTGAGCTGGGCTGGGTCGCATGCACCTGTAGTCCC...GTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp TGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTCCGTCTCGGTCTCCATaGCCGCCATCTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CPFLSTNSHDPQDTFSKSPSRSP*PPSCLA
Trigger: GGCCAGGCAAGATGGCGGCCATGGAGACCGAGACGG...AGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CCA 90 bp TCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTCTAGGGTTCTCTGGAGCAGGGGATCGGTaGGCAGCGACTCTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: STNSHDPQDTFSKSLGFSGAGDR*AATLGS
Trigger: TGACCCTAGAGTCGCTGCCCACCGATCCCCTGCTCC...AGAGAACCCTAGAGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp CTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAAGCACATTACTGTTTCGACACATTCTGGATCGTaGACATATCTGAAAATTTGG +
Preference number: 4 (lower is better)
Translates to: LQLHWPPWVKHTKHITVSTHSGS*TYLKIW
Trigger: CCAAATTTTCAGATATGTTCACGATCCAGAATGTGT...CGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR TCA 90 bp CCAAACTTAAACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCATCACAACACACATGCTaGTGCAAGATTCTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PNLNPSIRVIPEARGHFPSQHTC*CKILEW
Trigger: CCACTCCAGAATCTTGCATCAGCATGTGTGTTGTGA...TGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGTTTAAGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR GCA 90 bp ACTGCCTGCCAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTTTCAGTCCCTGTCTCTaGTGGAATCCTCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TACQNTPQCSLNFRTRNIFSPCL*WNPPAA
Trigger: AGCTGCCGGAGGATTCCAGCAGAGACAGGGACTGAA...AATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTGGCAGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR GCA 90 bp ACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAAAGATTCAACTTTGTTTCGGCCCTCTaGAGCTTCCACTGCTATGTA +
Preference number: 4 (lower is better)
Translates to: THPSGSFQKLEGIFQRFNFVSAL*SFHCYV
Trigger: TACATAGCAGTGGAAGCTGCAGAGGGCCGAAACAAA...GTTGAATCTTTGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR GCA 90 bp TTTAAAACAGCAGAAATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCAGCTGGGACTACAGGTaGATGCGACCCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FKTAEILWLETMEPHLLVSWDYR*MRPSPA
Trigger: AGCTGGGCTGGGTCGCATGCACCTGTAGTCCCAGCT...GACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAATTTCTGCTGTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp AAATCTTCACTTCCAAACGCACACTGTAGATTCTTTTCACTAGATATGCCACACTCAGTGGGGTGGTTCTaGGTTGGGGTGTCCCGTGAT +
Preference number: 4 (lower is better)
Translates to: KSSLPNAHCRFFSLDMPHSVGWF*VGVSRD
Trigger: ATCACGGGACACCCCAACCCAGAACCACCCCACTGA...GTGTGGCATATCTAGTGAAAAGAATCTACAGTGTGCGTTTGGAAGTGAAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530401.5
3UTR CAA 72 bp TCATTATTATCTCTCATGGTTCATGTGGGTTGGTGTTaGGGAAGTATTCAGTGGGGTGGTTCTGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SLLSLMVHVGWC*GSIQWGGSGLG
Trigger: CCCCAACCCAGAACCACCCCACTGAATACTTCCCAAACACCAACCCACATGAACCATGAGAGATAATAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR GCA 90 bp AACTATTTGCCTGGCTTATCTGCAGTGTTAACCCTACAAAGTCATGTAAATCAGTTCAGTCCCTGTCTCTaGTGGAATCCTCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: NYLPGLSAVLTLQSHVNQFSPCL*WNPPAA
Trigger: AGCTGCCGGAGGATTCCAGCAGAGACAGGGACTGAA...CTGATTTACATGACTTTGTAGGGTTAACACTGCAGATAAGCCAGGCAAATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR GCA 90 bp ACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAAAGATTCAACCCTGAATGTTGGACATaGCATATGGAATCGGGGAAT +
Preference number: 4 (lower is better)
Translates to: THPSGSFQKLEGIFQRFNPECWT*HMESGN
Trigger: ATTCCCCGATTCCATATGGCATGTCCAACATTCAGG...GTTGAATCTTTGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CCA 90 bp CCAAACTTAAACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCACATGTCAATAGCAGCTaGATTTCGAGCCATTTGGTC +
Preference number: 4 (lower is better)
Translates to: PNLNPSIRVIPEARGHFPHVNSS*ISSHLV
Trigger: GACCAAATGGCTCGAAATCCAGCTGCTATTGACATG...TGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGTTTAAGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CCA 90 bp GACACGCCAAATATGAATTTCCATAGACTTGAACAGTGGATTCTCACAACACACACACACAGAGAGGAGTaGAAATGTGCAGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: DTPNMNFHRLEQWILTTHTHREE*KCAAGA
Trigger: GGCTCCAGCTGCACATTTCCACTCCTCTCTGTGTGT...GTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp CTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAAGCACATTACTGTTTCGTTAAAGAACTCAATGTaGCTAAGGAGAAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: LQLHWPPWVKHTKHITVSLKNSM*LRRKIA
Trigger: AGCAATCTTTCTCCTTAGCCACATTGAGTTCTTTAA...CGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp CAGACTGGTAGAGGACGAAAAAGCAGAACAATTCTCCATATCAGAAAACTAATAGCACTCCAGCTACACTaGCCTCCTTGGGTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: QTGRGRKSRTILHIRKLIALQLH*PPWVKH
Trigger: GTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAGTGC...TATTAGTTTTCTGATATGGAGAATTGTTCTGCTTTTTCGTCCTCTACCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp ACTGCCTGCCAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTTTGGGAAGTATTCAGTaGGGTGGTTCTGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TACQNTPQCSLNFRTRNILGSIQ*GGSGLG
Trigger: CCCCAACCCAGAACCACCCCACTGAATACTTCCCAA...AATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTGGCAGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp CTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAAGCACATTACTGTTTCGTGCAAGATTCTGGAGTaGATTCTATATCTTGTGTTA +
Preference number: 4 (lower is better)
Translates to: LQLHWPPWVKHTKHITVSCKILE*ILYLVL
Trigger: TAACACAAGATATAGAATCCACTCCAGAATCTTGCA...CGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR TCA 90 bp GACACGCCAAATATGAATTTCCATAGACTTGAACAGTGGATTCTCACAACACACCTCCACAGCGGATCATaGCTTGATAGCTGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: DTPNMNFHRLEQWILTTHLHSGS*LDSWLS
Trigger: ACTTAGCCAGCTATCAAGTCATGATCCGCTGTGGAG...GTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR TCA 90 bp CACAGTAATATCCCCAGTTGTTGCTACACATTCTGGATCGTGAACATATCTGAACTCCACAGCGGATCATaGCTTGATAGCTGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: HSNIPSCCYTFWIVNISELHSGS*LDSWLS
Trigger: ACTTAGCCAGCTATCAAGTCATGATCCGCTGTGGAG...TTCAGATATGTTCACGATCCAGAATGTGTAGCAACAACTGGGGATATTACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR TCA 90 bp ACAGTGCCATGCTTCCCAATAACCCAGGAACCACTAACTTCTGTCCATTGTGAAGCTCCAAATATTTCTTaGGATCATCCCAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TVPCFPITQEPLTSVHCEAPNIS*DHPRPF
Trigger: AAAAGGCCTGGGATGATCTCAAGAAATATTTGGAGC...TTCACAATGGACAGAAGTTAGTGGTTCCTGGGTTATTGGGAAGCATGGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529137.1
CDS-3UTR CCA 90 bp CCAAACTTAAACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCATTCATATACCCGACCTaGGCTGATGATTGGAAATTC +
Preference number: 4 (lower is better)
Translates to: PNLNPSIRVIPEARGHFPFIYPT*ADDWKF
Trigger: GAATTTCCAATCATCAGCCCAGGTCGGGTATATGAA...TGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGTTTAAGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CCA 90 bp ACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAAAGATTCAACACAGCAGAAATTCTCTaGTTAGAGACTATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: THPSGSFQKLEGIFQRFNTAEIL*LETMEP
Trigger: AGGCTCCATAGTCTCTAACCAGAGAATTTCTGCTGT...GTTGAATCTTTGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR TCA 90 bp ATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCCATTTCTCTCAACAACTCCACAGCGGATCATaGCTTGATAGCTGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: ILWLETMEPHLLVHFSQQLHSGS*LDSWLS
Trigger: ACTTAGCCAGCTATCAAGTCATGATCCGCTGTGGAG...TTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp TCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCATCCCTCCACAGCGGATCATaGCTTGATAGCTGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: SALDQINIMSIFPNLNPSLHSGS*LDSWLS
Trigger: ACTTAGCCAGCTATCAAGTCATGATCCGCTGTGGAG...GGATGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp CCAAACTTAAACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAATTGTGAATTCGGTATaGACATCGATAATCGTCAGG +
Preference number: 4 (lower is better)
Translates to: PNLNPSIRVIPEARGHFPIVNSV*TSIIVR
Trigger: CCTGACGATTATCGATGTTCATACCGAATTCACAAT...TGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGTTTAAGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp TTCTGGATCGTGAACATATCTGAAAATTTGGTCTCTGATGATGGGGAAGCCACCAAACGATGTGGAAACTaGCACAGTAATATCCCCAGT +
Preference number: 4 (lower is better)
Translates to: FWIVNISENLVSDDGEATKRCGN*HSNIPS
Trigger: ACTGGGGATATTACTGTGTCAGTTTCCACATCGTTT...GGTGGCTTCCCCATCATCAGAGACCAAATTTTCAGATATGTTCACGATCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR TCA 90 bp ACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAAAGATTCAACAGGAAGTGCATCTTTTaGCATTTCAATCCTGATTCG +
Preference number: 4 (lower is better)
Translates to: THPSGSFQKLEGIFQRFNRKCIF*HFNPDS
Trigger: CGAATCAGGATTGAAATGTCAAAAGATGCACTTCCT...GTTGAATCTTTGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp CCAAACTTAAACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCATTTTCAAACTGGAGTTaGAAATGTGTCAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PNLNPSIRVIPEARGHFPFSNWS*KCVSSG
Trigger: TCCAGAGCTGACACATTTTCAACTCCAGTTTGAAAA...TGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGTTTAAGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp GTGTCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCAACCCCATTAACACTCTaGTCTAATCTCCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VSALDQINIMSIFPNLNPTPLTL*SNLQPL
Trigger: GAGGGGCTGGAGATTAGATCAGAGTGTTAATGGGGT...TGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp AACTTCTTCCACGTCACCCTTAGCATTTGTTATTCTCCAATAGCGACTGTCCAACATGTCAATAGCAGCTaGATTTCGAGCCATTTGGTC +
Preference number: 4 (lower is better)
Translates to: NFFHVTLSICYSPIATVQHVNSS*ISSHLV
Trigger: GACCAAATGGCTCGAAATCCAGCTGCTATTGACATG...TTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR CCA 90 bp CACAGTAATATCCCCAGTTGTTGCTACACATTCTGGATCGTGAACATATCTGAAGGATTTCGAGCCATTTaGTCCCAGGAACCACTAACT +
Preference number: 4 (lower is better)
Translates to: HSNIPSCCYTFWIVNISEGFRAI*SQEPLT
Trigger: AGTTAGTGGTTCCTGGGACCAAATGGCTCGAAATCC...TTCAGATATGTTCACGATCCAGAATGTGTAGCAACAACTGGGGATATTACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR TCA 90 bp AACTTCTTCCACGTCACCCTTAGCATTTGTTATTCTCCAATAGCGACTGTCCAAGCTCCAAATATTTCTTaGGATCATCCCAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: NFFHVTLSICYSPIATVQAPNIS*DHPRPF
Trigger: AAAAGGCCTGGGATGATCTCAAGAAATATTTGGAGC...TTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR TCA 90 bp TTCTGGATCGTGAACATATCTGAAAATTTGGTCTCTGATGATGGGGAAGCCACCATTGTGAATTCGGTATaGACATCGATAATCGTCAGG +
Preference number: 4 (lower is better)
Translates to: FWIVNISENLVSDDGEATIVNSV*TSIIVR
Trigger: CCTGACGATTATCGATGTTCATACCGAATTCACAAT...GGTGGCTTCCCCATCATCAGAGACCAAATTTTCAGATATGTTCACGATCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR TCA 90 bp TTCTGGATCGTGAACATATCTGAAAATTTGGTCTCTGATGATGGGGAAGCCACCAGGAAGTGCATCTTTTaGCATTTCAATCCTGATTCG +
Preference number: 4 (lower is better)
Translates to: FWIVNISENLVSDDGEATRKCIF*HFNPDS
Trigger: CGAATCAGGATTGAAATGTCAAAAGATGCACTTCCT...GGTGGCTTCCCCATCATCAGAGACCAAATTTTCAGATATGTTCACGATCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR TCA 90 bp CCAAACTTAAACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAATTACAAGGGAAATCTaGCACTATTTTGAACTACGC +
Preference number: 4 (lower is better)
Translates to: PNLNPSIRVIPEARGHFPITREI*HYFELR
Trigger: GCGTAGTTCAAAATAGTGTCAGATTTCCCTTGTAAT...TGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGTTTAAGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp AAATCTTCACTTCCAAACGCACACTGTAGATTCTTTTCACTAGATATGCCACACCCCTCTATCTCTGTGTaGTGTCTCTACATGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KSSLPNAHCRFFSLDMPHPSISV*CLYMVS
Trigger: AGAGACCATGTAGAGACATCACACAGAGATAGAGGG...GTGTGGCATATCTAGTGAAAAGAATCTACAGTGTGCGTTTGGAAGTGAAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR GCA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAAAATCGTCAGGAAGCTTaGAGCCAATCTGCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKNRQEA*SQSALP
Trigger: TGGAAGCGCAGATTGGCTGCAAGCTTCCTGACGATT...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR GCA 90 bp TTTAAAACAGCAGAAATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCAATCGTCAGGAAGCTTaGAGCCAATCTGCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: FKTAEILWLETMEPHLLVNRQEA*SQSALP
Trigger: TGGAAGCGCAGATTGGCTGCAAGCTTCCTGACGATT...GACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAATTTCTGCTGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR GCA 90 bp AACTATTTGCCTGGCTTATCTGCAGTGTTAACCCTACAAAGTCATGTAAATCAGCTCTGCAGCTTCCACTaGTATGTACTGACTCAAACC +
Preference number: 4 (lower is better)
Translates to: NYLPGLSAVLTLQSHVNQLCSFH*YVLTQT
Trigger: GGTTTGAGTCAGTACATAGCAGTGGAAGCTGCAGAG...CTGATTTACATGACTTTGTAGGGTTAACACTGCAGATAAGCCAGGCAAATAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR GCA 90 bp CTACGAATTAATCAGACTGGTAGAGGACGAAAAAGCAGAACAATTCTCCATATCCTCTGCAGCTTCCACTaGTATGTACTGACTCAAACC +
Preference number: 4 (lower is better)
Translates to: LRINQTGRGRKSRTILHILCSFH*YVLTQT
Trigger: GGTTTGAGTCAGTACATAGCAGTGGAAGCTGCAGAG...GATATGGAGAATTGTTCTGCTTTTTCGTCCTCTACCAGTCTGATTAATTCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR GCA 90 bp TCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCATCCCTCTGCAGCTTCCACTaGTATGTACTGACTCAAACC +
Preference number: 4 (lower is better)
Translates to: SALDQINIMSIFPNLNPSLCSFH*YVLTQT
Trigger: GGTTTGAGTCAGTACATAGCAGTGGAAGCTGCAGAG...GGATGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR GCA 90 bp ACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAAAGATTCAACCAAAACACACCTCAATaGTCTTTGAACTTTAGGACA +
Preference number: 4 (lower is better)
Translates to: THPSGSFQKLEGIFQRFNQNTPQ*SLNFRT
Trigger: TGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTG...GTTGAATCTTTGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CCA 90 bp ACTGCCTGCCAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTTGGAAATACAGTTTCTaGCATTCCTCCACTGGGAAG +
Preference number: 4 (lower is better)
Translates to: TACQNTPQCSLNFRTRNIWKYSF*HSSTGK
Trigger: CTTCCCAGTGGAGGAATGCCAGAAACTGTATTTCCA...AATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTGGCAGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CCA 90 bp GACACGCCAAATATGAATTTCCATAGACTTGAACAGTGGATTCTCACAACACACCAGCAAGGACCTACTTaGTATTCTGGAAAGTATGGG +
Preference number: 4 (lower is better)
Translates to: DTPNMNFHRLEQWILTTHQQGPT*YSGKYG
Trigger: CCCATACTTTCCAGAATACCAAGTAGGTCCTTGCTG...GTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp ATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCCATTTCTCTCAACAAGGACTTCTTACATGGTaGCTCAGGGTGTCAAAGACA +
Preference number: 4 (lower is better)
Translates to: ILWLETMEPHLLVHFSQQGLLTW*LRVSKT
Trigger: TGTCTTTGACACCCTGAGCCACCATGTAAGAAGTCC...TTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAAGCTGGACTTCTTACATaGTGGCTCAGGGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKAGLLT*WLRVSK
Trigger: CTTTGACACCCTGAGCCACCATGTAAGAAGTCCAGC...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp CCAAACTTAAACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCACATTATTATCTCTCATaGTTCATGTGGGTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: PNLNPSIRVIPEARGHFPHYYLS*FMWVGV
Trigger: AACACCAACCCACATGAACCATGAGAGATAATAATG...TGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGTTTAAGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR TCA 90 bp CACAGTAATATCCCCAGTTGTTGCTACACATTCTGGATCGTGAACATATCTGAAGATGGGGAAGCCACCTaGTACAACATTTTTGACATA +
Preference number: 4 (lower is better)
Translates to: HSNIPSCCYTFWIVNISEDGEAT*YNIFDI
Trigger: TATGTCAAAAATGTTGTATCAGGTGGCTTCCCCATC...TTCAGATATGTTCACGATCCAGAATGTGTAGCAACAACTGGGGATATTACTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR GCA 90 bp TTTACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCATTTGTTTCGGCCCTCTaGAGCTTCCACTGCTATGTA +
Preference number: 4 (lower is better)
Translates to: FTCPFLSTNSHDPQDTFSFVSAL*SFHCYV
Trigger: TACATAGCAGTGGAAGCTGCAGAGGGCCGAAACAAA...TGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR GCA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATTTGTTTCGGCCCTCTaGAGCTTCCACTGCTATGTA +
Preference number: 4 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKFVSAL*SFHCYV
Trigger: TACATAGCAGTGGAAGCTGCAGAGGGCCGAAACAAA...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR GCA 90 bp GACACGCCAAATATGAATTTCCATAGACTTGAACAGTGGATTCTCACAACACACTTTGCCTGGCTTATCTaGAGTGTTAACCCTACAAAG +
Preference number: 4 (lower is better)
Translates to: DTPNMNFHRLEQWILTTHFAWLI*SVNPTK
Trigger: CTTTGTAGGGTTAACACTGCAGATAAGCCAGGCAAA...GTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR GCA 90 bp TGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTCCACCTAATTCCCTCTaGTCCTTTCACGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: CPFLSTNSHDPQDTFSKSPPNSL*SFHVSA
Trigger: AGCTGAAACGTGAAAGGAGCAGAGGGAATTAGGTGG...AGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp GACACGCCAAATATGAATTTCCATAGACTTGAACAGTGGATTCTCACAACACACTCGAGCCATTTGGTCTaGACATTGGTAGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: DTPNMNFHRLEQWILTTHSSHLV*TLVENF
Trigger: GAAGTTTTCTACCAATGTCCAGACCAAATGGCTCGA...GTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp AAATCTTCACTTCCAAACGCACACTGTAGATTCTTTTCACTAGATATGCCACACCATGTCAATAGCAGCTaGATTTCGAGCCATTTGGTC +
Preference number: 4 (lower is better)
Translates to: KSSLPNAHCRFFSLDMPHHVNSS*ISSHLV
Trigger: GACCAAATGGCTCGAAATCCAGCTGCTATTGACATG...GTGTGGCATATCTAGTGAAAAGAATCTACAGTGTGCGTTTGGAAGTGAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CCA 90 bp TTCTGGATCGTGAACATATCTGAAAATTTGGTCTCTGATGATGGGGAAGCCACCACATATCTGAAAATTTaGTCTCTGATGATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FWIVNISENLVSDDGEATTYLKI*SLMMGK
Trigger: CTTCCCCATCATCAGAGACCAAATTTTCAGATATGT...GGTGGCTTCCCCATCATCAGAGACCAAATTTTCAGATATGTTCACGATCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR CCA 90 bp CACAGTAATATCCCCAGTTGTTGCTACACATTCTGGATCGTGAACATATCTGAATTCATATACCCGACCTaGGCTGATGATTGGAAATTC +
Preference number: 4 (lower is better)
Translates to: HSNIPSCCYTFWIVNISEFIYPT*ADDWKF
Trigger: GAATTTCCAATCATCAGCCCAGGTCGGGTATATGAA...TTCAGATATGTTCACGATCCAGAATGTGTAGCAACAACTGGGGATATTACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR CCA 90 bp CCAAACTTAAACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCATCCCCATTGTATAACTaGAGCTTCATAACTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PNLNPSIRVIPEARGHFPSPLYN*SFITFF
Trigger: AAAGAAAGTTATGAAGCTCCAGTTATACAATGGGGA...TGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGTTTAAGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CCA 90 bp TCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCATCCTGGAAATACAGTTTCTaGCATTCCTCCACTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SALDQINIMSIFPNLNPSWKYSF*HSSTGK
Trigger: CTTCCCAGTGGAGGAATGCCAGAAACTGTATTTCCA...GGATGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp ATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCCATTTCTCTCAACAAGCTCCAAATATTTCTTaGGATCATCCCAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: ILWLETMEPHLLVHFSQQAPNIS*DHPRPF
Trigger: AAAAGGCCTGGGATGATCTCAAGAAATATTTGGAGC...TTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp GTGTCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCAGCTCCAAATATTTCTTaGGATCATCCCAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: VSALDQINIMSIFPNLNPAPNIS*DHPRPF
Trigger: AAAAGGCCTGGGATGATCTCAAGAAATATTTGGAGC...TGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp TCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTCTAGGGTTCTCTTCCACTGCTATGTACTaGCTCAAACCAGTATGTATG +
Preference number: 4 (lower is better)
Translates to: STNSHDPQDTFSKSLGFSSTAMY*LKPVCM
Trigger: CATACATACTGGTTTGAGTCAGTACATAGCAGTGGA...AGAGAACCCTAGAGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp AACTATTTGCCTGGCTTATCTGCAGTGTTAACCCTACAAAGTCATGTAAATCAGTCCACTGCTATGTACTaGCTCAAACCAGTATGTATG +
Preference number: 4 (lower is better)
Translates to: NYLPGLSAVLTLQSHVNQSTAMY*LKPVCM
Trigger: CATACATACTGGTTTGAGTCAGTACATAGCAGTGGA...CTGATTTACATGACTTTGTAGGGTTAACACTGCAGATAAGCCAGGCAAATAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp AAATCTTCACTTCCAAACGCACACTGTAGATTCTTTTCACTAGATATGCCACACTCCACTGCTATGTACTaGCTCAAACCAGTATGTATG +
Preference number: 4 (lower is better)
Translates to: KSSLPNAHCRFFSLDMPHSTAMY*LKPVCM
Trigger: CATACATACTGGTTTGAGTCAGTACATAGCAGTGGA...GTGTGGCATATCTAGTGAAAAGAATCTACAGTGTGCGTTTGGAAGTGAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp ATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCCATTTCTCTCAACAAGATGGGGAAGCCACCTaGTACAACATTTTTGACATA +
Preference number: 4 (lower is better)
Translates to: ILWLETMEPHLLVHFSQQDGEAT*YNIFDI
Trigger: TATGTCAAAAATGTTGTATCAGGTGGCTTCCCCATC...TTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp TCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCATCCGATGGGGAAGCCACCTaGTACAACATTTTTGACATA +
Preference number: 4 (lower is better)
Translates to: SALDQINIMSIFPNLNPSDGEAT*YNIFDI
Trigger: TATGTCAAAAATGTTGTATCAGGTGGCTTCCCCATC...GGATGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp AACTTCTTCCACGTCACCCTTAGCATTTGTTATTCTCCAATAGCGACTGTCCAAACACATTCTGGATCGTaGACATATCTGAAAATTTGG +
Preference number: 4 (lower is better)
Translates to: NFFHVTLSICYSPIATVQTHSGS*TYLKIW
Trigger: CCAAATTTTCAGATATGTTCACGATCCAGAATGTGT...TTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR TCA 90 bp AAATCTTCACTTCCAAACGCACACTGTAGATTCTTTTCACTAGATATGCCACACAAACGATGTGGAAACTaGCACAGTAATATCCCCAGT +
Preference number: 4 (lower is better)
Translates to: KSSLPNAHCRFFSLDMPHKRCGN*HSNIPS
Trigger: ACTGGGGATATTACTGTGTCAGTTTCCACATCGTTT...GTGTGGCATATCTAGTGAAAAGAATCTACAGTGTGCGTTTGGAAGTGAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp ACTGCCTGCCAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTTTTTCAAACTGGAGTTaGAAATGTGTCAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TACQNTPQCSLNFRTRNIFSNWS*KCVSSG
Trigger: TCCAGAGCTGACACATTTTCAACTCCAGTTTGAAAA...AATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTGGCAGGCAGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp ACTGCCTGCCAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTCAGCTTCAAAATACATaGAGCAAACCTGACAGAACT +
Preference number: 4 (lower is better)
Translates to: TACQNTPQCSLNFRTRNIQLQNT*SKPDRT
Trigger: AGTTCTGTCAGGTTTGCTTCATGTATTTTGAAGCTG...AATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTGGCAGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp GACACGCCAAATATGAATTTCCATAGACTTGAACAGTGGATTCTCACAACACACCAGACACGCCAAATATaGATTTCCATAGACTTGAAC +
Preference number: 4 (lower is better)
Translates to: DTPNMNFHRLEQWILTTHQTRQI*ISIDLN
Trigger: GTTCAAGTCTATGGAAATTCATATTTGGCGTGTCTG...GTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR GCA 90 bp TCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTCTAGGGTTCTCTAATATCCCCAGTTGTTaGTACACATTCTGGATCGTG +
Preference number: 4 (lower is better)
Translates to: STNSHDPQDTFSKSLGFSNIPSC*YTFWIV
Trigger: CACGATCCAGAATGTGTAGCAACAACTGGGGATATT...AGAGAACCCTAGAGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR GCA 90 bp AAATCTTCACTTCCAAACGCACACTGTAGATTCTTTTCACTAGATATGCCACACAATATCCCCAGTTGTTaGTACACATTCTGGATCGTG +
Preference number: 4 (lower is better)
Translates to: KSSLPNAHCRFFSLDMPHNIPSC*YTFWIV
Trigger: CACGATCCAGAATGTGTAGCAACAACTGGGGATATT...GTGTGGCATATCTAGTGAAAAGAATCTACAGTGTGCGTTTGGAAGTGAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR GCA 90 bp TGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTCCTGAATGTTGGACATaGCATATGGAATCGGGGAAT +
Preference number: 4 (lower is better)
Translates to: CPFLSTNSHDPQDTFSKSPECWT*HMESGN
Trigger: ATTCCCCGATTCCATATGGCATGTCCAACATTCAGG...AGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR GCA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAACCTGAATGTTGGACATaGCATATGGAATCGGGGAAT +
Preference number: 4 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKPECWT*HMESGN
Trigger: ATTCCCCGATTCCATATGGCATGTCCAACATTCAGG...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR GCA 90 bp CAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTATCAGCGATAGTAACTCAACTGCCTaGCAAAACACACCTCAATGC +
Preference number: 4 (lower is better)
Translates to: QNTPQCSLNFRTRNIISDSNSTA*QNTPQC
Trigger: GCATTGAGGTGTGTTTTGGCAGGCAGTTGAGTTACT...ATCGCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR GCA 90 bp ATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCCATTTCTCTCAACAATGTCAATTCTGCCCATaGAATGTCTGTAATCAAGCC +
Preference number: 4 (lower is better)
Translates to: ILWLETMEPHLLVHFSQQCQFCP*NVCNQA
Trigger: GGCTTGATTACAGACATTGCATGGGCAGAATTGACA...TTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp GTGTCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCATCGAGCCATTTGGTCTaGACATTGGTAGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: VSALDQINIMSIFPNLNPSSHLV*TLVENF
Trigger: GAAGTTTTCTACCAATGTCCAGACCAAATGGCTCGA...TGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CCA 90 bp TTTACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCACATGTCAATAGCAGCTaGATTTCGAGCCATTTGGTC +
Preference number: 4 (lower is better)
Translates to: FTCPFLSTNSHDPQDTFSHVNSS*ISSHLV
Trigger: GACCAAATGGCTCGAAATCCAGCTGCTATTGACATG...TGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CCA 90 bp TCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCATCCACCTACTTGGTATTCTaGAAAGTATGGGGCAACTTG +
Preference number: 4 (lower is better)
Translates to: SALDQINIMSIFPNLNPSTYLVF*KVWGNL
Trigger: CAAGTTGCCCCATACTTTCCAGAATACCAAGTAGGT...GGATGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp TCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCATCCATGGTTCATGTGGGTTaGTGTTTGGGAAGTATTCAG +
Preference number: 4 (lower is better)
Translates to: SALDQINIMSIFPNLNPSMVHVG*CLGSIQ
Trigger: CTGAATACTTCCCAAACACCAACCCACATGAACCAT...GGATGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR TCA 90 bp TTTACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAGCTCCAAATATTTCTTaGGATCATCCCAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: FTCPFLSTNSHDPQDTFSAPNIS*DHPRPF
Trigger: AAAAGGCCTGGGATGATCTCAAGAAATATTTGGAGC...TGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp TTTACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAGATGGGGAAGCCACCTaGTACAACATTTTTGACATA +
Preference number: 4 (lower is better)
Translates to: FTCPFLSTNSHDPQDTFSDGEAT*YNIFDI
Trigger: TATGTCAAAAATGTTGTATCAGGTGGCTTCCCCATC...TGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp TTTACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAACGATGTGGAAACTaGCACAGTAATATCCCCAGT +
Preference number: 4 (lower is better)
Translates to: FTCPFLSTNSHDPQDTFSKRCGN*HSNIPS
Trigger: ACTGGGGATATTACTGTGTCAGTTTCCACATCGTTT...TGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAACTCAACAAATTCACATaGCCCCCAAGATACTTTCTC +
Preference number: 4 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKLNKFT*PPRYFL
Trigger: GAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAG...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAACACCAAGGCCTCTCCTaGCACATCTTTATATTAGAA +
Preference number: 4 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKHQGLS*HIFILE
Trigger: TTCTAATATAAAGATGTGTCAGGAGAGGCCTTGGTG...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR GCA 90 bp TTTACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAATATCCCCAGTTGTTaGTACACATTCTGGATCGTG +
Preference number: 4 (lower is better)
Translates to: FTCPFLSTNSHDPQDTFSNIPSC*YTFWIV
Trigger: CACGATCCAGAATGTGTAGCAACAACTGGGGATATT...TGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR GCA 90 bp TTTACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCATTTGCCTGGCTTATCTaGAGTGTTAACCCTACAAAG +
Preference number: 4 (lower is better)
Translates to: FTCPFLSTNSHDPQDTFSFAWLI*SVNPTK
Trigger: CTTTGTAGGGTTAACACTGCAGATAAGCCAGGCAAA...TGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CCA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCGAGCCATTTGGTCTaGACATTGGTAGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKSSHLV*TLVENF
Trigger: GAAGTTTTCTACCAATGTCCAGACCAAATGGCTCGA...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CCA 90 bp CACAGTAATATCCCCAGTTGTTGCTACACATTCTGGATCGTGAACATATCTGAATGTTGCTACACATTCTaGATCGTGAACATATCTGAA +
Preference number: 4 (lower is better)
Translates to: HSNIPSCCYTFWIVNISECCYTF*IVNISE
Trigger: TTCAGATATGTTCACGATCCAGAATGTGTAGCAACA...TTCAGATATGTTCACGATCCAGAATGTGTAGCAACAACTGGGGATATTACTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR CCA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATTCATATACCCGACCTaGGCTGATGATTGGAAATTC +
Preference number: 4 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKFIYPT*ADDWKF
Trigger: GAATTTCCAATCATCAGCCCAGGTCGGGTATATGAA...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CCA 90 bp CAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTATCAGCGATTTCATATACCCGACCTaGGCTGATGATTGGAAATTC +
Preference number: 4 (lower is better)
Translates to: QNTPQCSLNFRTRNIISDFIYPT*ADDWKF
Trigger: GAATTTCCAATCATCAGCCCAGGTCGGGTATATGAA...ATCGCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CCA 90 bp TGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTACAGCAGAAATTCTCTaGTTAGAGACTATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: CPFLSTNSHDPQDTFSKSTAEIL*LETMEP
Trigger: AGGCTCCATAGTCTCTAACCAGAGAATTTCTGCTGT...AGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAAATTGTGAATTCGGTATaGACATCGATAATCGTCAGG +
Preference number: 4 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKIVNSV*TSIIVR
Trigger: CCTGACGATTATCGATGTTCATACCGAATTCACAAT...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp ATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCCATTTCTCTCAACAAACACATTCTGGATCGTaGACATATCTGAAAATTTGG +
Preference number: 4 (lower is better)
Translates to: ILWLETMEPHLLVHFSQQTHSGS*TYLKIW
Trigger: CCAAATTTTCAGATATGTTCACGATCCAGAATGTGT...TTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp AAATCTTCACTTCCAAACGCACACTGTAGATTCTTTTCACTAGATATGCCACACACACATTCTGGATCGTaGACATATCTGAAAATTTGG +
Preference number: 4 (lower is better)
Translates to: KSSLPNAHCRFFSLDMPHTHSGS*TYLKIW
Trigger: CCAAATTTTCAGATATGTTCACGATCCAGAATGTGT...GTGTGGCATATCTAGTGAAAAGAATCTACAGTGTGCGTTTGGAAGTGAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp TTTAAAACAGCAGAAATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCAGGAAGTGCATCTTTTaGCATTTCAATCCTGATTCG +
Preference number: 4 (lower is better)
Translates to: FKTAEILWLETMEPHLLVRKCIF*HFNPDS
Trigger: CGAATCAGGATTGAAATGTCAAAAGATGCACTTCCT...GACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAATTTCTGCTGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAAAGGAAGTGCATCTTTTaGCATTTCAATCCTGATTCG +
Preference number: 4 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKRKCIF*HFNPDS
Trigger: CGAATCAGGATTGAAATGTCAAAAGATGCACTTCCT...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR TCA 90 bp AAATCTTCACTTCCAAACGCACACTGTAGATTCTTTTCACTAGATATGCCACACACACATCAAAACTTGTaGAATGCAGCTAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: KSSLPNAHCRFFSLDMPHTHQNL*NAAKTV
Trigger: CACTGTTTTAGCTGCATTTCACAAGTTTTGATGTGT...GTGTGGCATATCTAGTGAAAAGAATCTACAGTGTGCGTTTGGAAGTGAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp GTGTCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCAATTACAAGGGAAATCTaGCACTATTTTGAACTACGC +
Preference number: 4 (lower is better)
Translates to: VSALDQINIMSIFPNLNPITREI*HYFELR
Trigger: GCGTAGTTCAAAATAGTGTCAGATTTCCCTTGTAAT...TGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR TCA 90 bp TGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTCAGCTTCAAAATACATaGAGCAAACCTGACAGAACT +
Preference number: 4 (lower is better)
Translates to: CPFLSTNSHDPQDTFSKSQLQNT*SKPDRT
Trigger: AGTTCTGTCAGGTTTGCTTCATGTATTTTGAAGCTG...AGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR GCA 90 bp GACACGCCAAATATGAATTTCCATAGACTTGAACAGTGGATTCTCACAACACACTCAAACCAGTATGTATaGAAAAAGTTAAAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: DTPNMNFHRLEQWILTTHSNQYV*KKLKGD
Trigger: GTCTCCCTTTAACTTTTTGCATACATACTGGTTTGA...GTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR GCA 90 bp TCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCATCCAAAGGAATTCTGTTATaGAAAGCAGCAAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: SALDQINIMSIFPNLNPSKGILL*KAANSQ
Trigger: CTGGGAATTTGCTGCTTTGCATAACAGAATTCCTTT...GGATGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR GCA 90 bp AAATCTTCACTTCCAAACGCACACTGTAGATTCTTTTCACTAGATATGCCACACAAAGGAATTCTGTTATaGAAAGCAGCAAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: KSSLPNAHCRFFSLDMPHKGILL*KAANSQ
Trigger: CTGGGAATTTGCTGCTTTGCATAACAGAATTCCTTT...GTGTGGCATATCTAGTGAAAAGAATCTACAGTGTGCGTTTGGAAGTGAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CCA 90 bp ATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCCATTTCTCTCAACAAACATATCTGAAAATTTaGTCTCTGATGATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ILWLETMEPHLLVHFSQQTYLKI*SLMMGK
Trigger: CTTCCCCATCATCAGAGACCAAATTTTCAGATATGT...TTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CCA 90 bp GTGTCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCAACATATCTGAAAATTTaGTCTCTGATGATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VSALDQINIMSIFPNLNPTYLKI*SLMMGK
Trigger: CTTCCCCATCATCAGAGACCAAATTTTCAGATATGT...TGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CCA 90 bp TCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCATCCTGTTGCTACACATTCTaGATCGTGAACATATCTGAA +
Preference number: 4 (lower is better)
Translates to: SALDQINIMSIFPNLNPSCCYTF*IVNISE
Trigger: TTCAGATATGTTCACGATCCAGAATGTGTAGCAACA...GGATGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CCA 90 bp GTGTCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCACATCTGAATATCTCTTaGAAATGTCAATTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VSALDQINIMSIFPNLNPHLNIS*KCQFCP
Trigger: TGGGCAGAATTGACATTTCCAAGAGATATTCAGATG...TGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAAGCTGATGCAAGATTCTaGAGTGGATTCTATATCTTG +
Preference number: 4 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKADARF*SGFYIL
Trigger: CAAGATATAGAATCCACTCCAGAATCTTGCATCAGC...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp TGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTCATAGACTTGAACAGTaGATTCTCACAACACACATG +
Preference number: 4 (lower is better)
Translates to: CPFLSTNSHDPQDTFSKSHRLEQ*ILTTHM
Trigger: CATGTGTGTTGTGAGAATCCACTGTTCAAGTCTATG...AGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR TCA 90 bp TTTAAAACAGCAGAAATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCCAGGACCCATTTCCTTaGAAGAGAAAACAATCTTTT +
Preference number: 4 (lower is better)
Translates to: FKTAEILWLETMEPHLLVQDPFP*KRKQSF
Trigger: AAAAGATTGTTTTCTCTTTCAAGGAAATGGGTCCTG...GACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAATTTCTGCTGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR GCA 90 bp GTGTCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCATCAAACCAGTATGTATaGAAAAAGTTAAAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: VSALDQINIMSIFPNLNPSNQYV*KKLKGD
Trigger: GTCTCCCTTTAACTTTTTGCATACATACTGGTTTGA...TGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR GCA 90 bp CTACGAATTAATCAGACTGGTAGAGGACGAAAAAGCAGAACAATTCTCCATATCTATAAACTAACTATTTaGCTGGCTTATCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LRINQTGRGRKSRTILHIYKLTI*LAYLQC
Trigger: ACACTGCAGATAAGCCAGGCAAATAGTTAGTTTATA...GATATGGAGAATTGTTCTGCTTTTTCGTCCTCTACCAGTCTGATTAATTCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR GCA 90 bp TTTACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCACAAAACACACCTCAATaGTCTTTGAACTTTAGGACA +
Preference number: 4 (lower is better)
Translates to: FTCPFLSTNSHDPQDTFSQNTPQ*SLNFRT
Trigger: TGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTG...TGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CCA 90 bp TGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTACATATCTGAAAATTTaGTCTCTGATGATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: CPFLSTNSHDPQDTFSKSTYLKI*SLMMGK
Trigger: CTTCCCCATCATCAGAGACCAAATTTTCAGATATGT...AGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CCA 90 bp TTTACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCATGTTGCTACACATTCTaGATCGTGAACATATCTGAA +
Preference number: 4 (lower is better)
Translates to: FTCPFLSTNSHDPQDTFSCCYTF*IVNISE
Trigger: TTCAGATATGTTCACGATCCAGAATGTGTAGCAACA...TGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CCA 90 bp TTTAAAACAGCAGAAATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCTGTTGCTACACATTCTaGATCGTGAACATATCTGAA +
Preference number: 4 (lower is better)
Translates to: FKTAEILWLETMEPHLLVCCYTF*IVNISE
Trigger: TTCAGATATGTTCACGATCCAGAATGTGTAGCAACA...GACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAATTTCTGCTGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CCA 90 bp GTGTCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCATCCCCATTGTATAACTaGAGCTTCATAACTTTCTTT +
Preference number: 4 (lower is better)
Translates to: VSALDQINIMSIFPNLNPSPLYN*SFITFF
Trigger: AAAGAAAGTTATGAAGCTCCAGTTATACAATGGGGA...TGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR GCA 90 bp TGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTTCAAACCAGTATGTATaGAAAAAGTTAAAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: CPFLSTNSHDPQDTFSKSSNQYV*KKLKGD
Trigger: GTCTCCCTTTAACTTTTTGCATACATACTGGTTTGA...AGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR GCA 90 bp TGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATCTTATAAACTAACTATTTaGCTGGCTTATCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: CPFLSTNSHDPQDTFSKSYKLTI*LAYLQC
Trigger: ACACTGCAGATAAGCCAGGCAAATAGTTAGTTTATA...AGATTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS CCA 90 bp CGGTGGGCAGCGACTCTAGGGTCAGCGGCGCCGTCTCGGTCTCCATaGCCGCCATCTTGCCTGGCCCGGTGCAGGTCTGGCCCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: RWAATLGSAAPSRSP*PPSCLARCRSGPAL
Trigger: CAGGGCGGGGCCAGACCTGCACCGGGCCAGGCAAGATGGCGGCCATGGAGACCGAGACGGCGCCGCTGACCCTAGAGTCGCTGCCCACCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448981.6
CDS GCA 90 bp CGCGGAGCGCGGCGGTGCGGCACGAGGGCCACTACCTCCTTCTCTTaGAAGTGGGCCTCACCGAGGCCTGGGAGAGAGATATCTCGTCGC +
Preference number: 5 (lower is better)
Translates to: RGARRCGTRATTSFS*KWASPRPGREISRR
Trigger: GCGACGAGATATCTCTCTCCCAGGCCTCGGTGAGGCCCACTTGCAAGAGAAGGAGGTAGTGGCCCTCGTGCCGCACCGCCGCGCTCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CCA 90 bp GCGCGGCGGTGCGGCACGAGGGCCACTACCTCCTTCTCTTGCAAGTaGGCCTCACCGAGGCCTGGGAGAGAGATATCTCGTCGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: ARRCGTRATTSFSCK*ASPRPGREISRRFS
Trigger: TGAGAAGCGACGAGATATCTCTCTCCCAGGCCTCGGTGAGGCCCACTTGCAAGAGAAGGAGGTAGTGGCCCTCGTGCCGCACCGCCGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CCA 90 bp CACGCACTGAAGTCCGAAAGTGAGCCCGGACAGCGATTCTGGCGCTaGGGAAGTCGCGCCAGGGGAGTAAGGGGTTGCCTATCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: HALKSESEPGQRFWR*GSRARGVRGCLSSP
Trigger: AGGAGAAGATAGGCAACCCCTTACTCCCCTGGCGCGACTTCCCCAGCGCCAGAATCGCTGTCCGGGCTCACTTTCGGACTTCAGTGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CCA 90 bp GAGGGCCACTACCTCCTTCTCTTGCAAGTGGGCCTCACCGAGGCCTaGGAGAGAGATATCTCGTCGCTTCTCATACCTGGGCCCAGGACA +
Preference number: 5 (lower is better)
Translates to: EGHYLLLLQVGLTEA*ERDISSLLIPGPRT
Trigger: TGTCCTGGGCCCAGGTATGAGAAGCGACGAGATATCTCTCTCCCAGGCCTCGGTGAGGCCCACTTGCAAGAGAAGGAGGTAGTGGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS TCA 90 bp GCAATGCTGACAGCAAAACAATTCTCACGCACTGAAGTCCGAAAGTaGGCCCGGACAGCGATTCTGGCGCTGGGGAAGTCGCGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: AMLTAKQFSRTEVRK*ARTAILALGKSRQG
Trigger: CCCCTGGCGCGACTTCCCCAGCGCCAGAATCGCTGTCCGGGCTCACTTTCGGACTTCAGTGCGTGAGAATTGTTTTGCTGTCAGCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS TCA 90 bp CGAACCGTAAGGAGCAATGCTGACAGCAAAACAATTCTCACGCACTaGAGTCCGAAAGTGAGCCCGGACAGCGATTCTGGCGCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: RTVRSNADSKTILTH*SPKVSPDSDSGAGE
Trigger: TTCCCCAGCGCCAGAATCGCTGTCCGGGCTCACTTTCGGACTTCAGTGCGTGAGAATTGTTTTGCTGTCAGCATTGCTCCTTACGGTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS TCA 90 bp CCAAGGTCCTGCATGATCTCACCACCCTCATCTCATCACTGTCTGTaGGTCACTCCCTACCTCCAGCAACGCCAGCCTTCTGTATCTTCC +
Preference number: 5 (lower is better)
Translates to: PRSCMISPPSSHHCL*VTPYLQQRQPSVSS
Trigger: GGAAGATACAGAAGGCTGGCGTTGCTGGAGGTAGGGAGTGACTCACAGACAGTGATGAGATGAGGGTGGTGAGATCATGCAGGACCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS TCA 90 bp GCTGGCAGCGCCATTTCTTCCACCACCCCAGACAGTCCCAAGTTCTaGAGAAACTGGGCATTGAACCACCCTTATCAGCAACCGGTGTTT +
Preference number: 5 (lower is better)
Translates to: AGSAISSTTPDSPKF*RNWALNHPYQQPVF
Trigger: AAACACCGGTTGCTGATAAGGGTGGTTCAATGCCCAGTTTCTTCAGAACTTGGGACTGTCTGGGGTGGTGGAAGAAATGGCGCTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS-3UTR CAA 90 bp CCCTGTTGTTCACTGCACTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAACAATCATCTCTCACTaGTTGATAGGACAAAGACCA +
Preference number: 5 (lower is better)
Translates to: PCCSLHSSYTGLLGSSTPTIISH*LIGQRP
Trigger: TGGTCTTTGTCCTATCAACAAGTGAGAGATGATTGT...TGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAGTGCAGTGAACAACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CAA 90 bp CTCCAGCTACACTGGCCTCCTTGGGTCAAGCACACCAAGCACATTACTGTTTCGCATGGTTCATGTGGGTaGGTGTTTGGGAAGTATTCA +
Preference number: 5 (lower is better)
Translates to: LQLHWPPWVKHTKHITVSHGSCG*VFGKYS
Trigger: TGAATACTTCCCAAACACCAACCCACATGAACCATG...CGAAACAGTAATGTGCTTGGTGTGCTTGACCCAAGGAGGCCAGTGTAGCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS TCA 90 bp CTTCCACCACCCCAGACAGTCCCAAGTTCTGAAGAAACTGGGCATTaGACCACCCTTATCAGCAACCGGTGTTTATTTCTGGAACAGATG +
Preference number: 5 (lower is better)
Translates to: LPPPQTVPSSEETGH*TTLISNRCLFLEQM
Trigger: CATCTGTTCCAGAAATAAACACCGGTTGCTGATAAGGGTGGTTCAATGCCCAGTTTCTTCAGAACTTGGGACTGTCTGGGGTGGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS-3UTR CAA 90 bp ACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAAAGATTCAACAACTACTCCAGGTCCTaGAACTTCTTCCACGTCACC +
Preference number: 5 (lower is better)
Translates to: THPSGSFQKLEGIFQRFNNYSRS*NFFHVT
Trigger: GGTGACGTGGAAGAAGTTCAAGGACCTGGAGTAGTT...GTTGAATCTTTGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CAA 90 bp CAGACTGGTAGAGGACGAAAAAGCAGAACAATTCTCCATATCAGAAAACTAATATGGGGTGGTTCTGGGTaGGGGTGTCCCGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: QTGRGRKSRTILHIRKLIWGGSG*GCPVML
Trigger: CAACATCACGGGACACCCCAACCCAGAACCACCCCA...TATTAGTTTTCTGATATGGAGAATTGTTCTGCTTTTTCGTCCTCTACCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS TCA 90 bp AAGAGGCAACACTTCTCGACTCGTTTTATAAGGCCAGCATCATCTTaGTACCAACACCTTTCAGAGATAAAACCATCCGAGGACACCTGG +
Preference number: 5 (lower is better)
Translates to: KRQHFSTRFIRPASS*YQHLSEIKPSEDTW
Trigger: CCAGGTGTCCTCGGATGGTTTTATCTCTGAAAGGTGTTGGTATCAAGATGATGCTGGCCTTATAAAACGAGTCGAGAAGTGTTGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529137.1
ENST00000533103.5
CDS-3UTR CAA 90 bp TCTTCCTCTCGAGCACCCTATAAACTCTTCCAGGGAACAGAAAAAGAGGCAACAGGCTCCAAATATTTCTaGAGATCATCCCAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: SSSRAPYKLFQGTEKEATGSKYF*RSSQAF
Trigger: AAAGGCCTGGGATGATCTCAAGAAATATTTGGAGCC...TGTTGCCTCTTTTTCTGTTCCCTGGAAGAGTTTATAGGGTGCTCGAGAGGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529137.1
CDS-3UTR CAA 90 bp CCAAACTTAAACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAGGCTCCAAATATTTCTaGAGATCATCCCAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: PNLNPSIRVIPEARGHFPGSKYF*RSSQAF
Trigger: AAAGGCCTGGGATGATCTCAAGAAATATTTGGAGCC...TGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGTTTAAGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CAA 90 bp AACTTCTTCCACGTCACCCTTAGCATTTGTTATTCTCCAATAGCGACTGTCCAAAACTACTCCAGGTCCTaGAACTTCTTCCACGTCACC +
Preference number: 5 (lower is better)
Translates to: NFFHVTLSICYSPIATVQNYSRS*NFFHVT
Trigger: GGTGACGTGGAAGAAGTTCAAGGACCTGGAGTAGTT...TTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR CAA 90 bp AACTTCTTCCACGTCACCCTTAGCATTTGTTATTCTCCAATAGCGACTGTCCAATGGATTTCGAGCCATTaGGTCCCAGGAACCACTAAC +
Preference number: 5 (lower is better)
Translates to: NFFHVTLSICYSPIATVQWISSH*VPGTTN
Trigger: GTTAGTGGTTCCTGGGACCAAATGGCTCGAAATCCA...TTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS GCA 90 bp CCTCTGCAGCTTCCACTGCTATGTACTGACTCAAACCAGTATGTATaGAAAAAGTTAAAGGGAGACAGTATTTCAGTCCCTGTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: PLQLPLLCTDSNQYV*KKLKGDSISVPVSA
Trigger: AGCAGAGACAGGGACTGAAATACTGTCTCCCTTTAACTTTTTGCATACATACTGGTTTGAGTCAGTACATAGCAGTGGAAGCTGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265651.8
ENST00000448981.6
ENST00000526785.5
ENST00000530013.5
ENST00000530401.5
ENST00000534136.5
CDS GCA 90 bp CAATCTCTGAACATACTTTTCCCTCTGCCAGAACTGCATATGCCCTaGTTCATATATGGCAGCTCCTTCCGATTTGATCACTTCTCACTT +
Preference number: 5 (lower is better)
Translates to: QSLNILFPLPELHMP*FIYGSSFRFDHFSL
Trigger: AAGTGAGAAGTGATCAAATCGGAAGGAGCTGCCATATATGAAGCAGGGCATATGCAGTTCTGGCAGAGGGAAAAGTATGTTCAGAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CCA 90 bp ATGCAAAAAGTTAAAGGGAGACAGTATTTCAGTCCCTGTCTCTGCTaGAATCCTCCGGCAGCTGTATCGACGTCTAACAAATCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: MQKVKGRQYFSPCLC*NPPAAVSTSNKSSE
Trigger: TTCTGAAGATTTGTTAGACGTCGATACAGCTGCCGGAGGATTCCAGCAGAGACAGGGACTGAAATACTGTCTCCCTTTAACTTTTTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265651.8
ENST00000448981.6
ENST00000526785.5
ENST00000530013.5
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CAA 90 bp CCAAACTTAAACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCACTTTTCAAACTGGAGTaGAAAATGTGTCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PNLNPSIRVIPEARGHFPLFKLE*KMCQLW
Trigger: CCAGAGCTGACACATTTTCAACTCCAGTTTGAAAAG...TGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGTTTAAGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CAA 90 bp ACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAAAGATTCAACGCATCTGAATATCTCTaGGAAATGTCAATTCTGCCC +
Preference number: 5 (lower is better)
Translates to: THPSGSFQKLEGIFQRFNASEYL*EMSILP
Trigger: GGGCAGAATTGACATTTCCAAGAGATATTCAGATGC...GTTGAATCTTTGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CAA 90 bp AACTATTTGCCTGGCTTATCTGCAGTGTTAACCCTACAAAGTCATGTAAATCAGAACTACTCCAGGTCCTaGAACTTCTTCCACGTCACC +
Preference number: 5 (lower is better)
Translates to: NYLPGLSAVLTLQSHVNQNYSRS*NFFHVT
Trigger: GGTGACGTGGAAGAAGTTCAAGGACCTGGAGTAGTT...CTGATTTACATGACTTTGTAGGGTTAACACTGCAGATAAGCCAGGCAAATAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CAA 90 bp CCAAACTTAAACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAACACCTCAATGCTCTTaGAACTTTAGGACAAGGAAT +
Preference number: 5 (lower is better)
Translates to: PNLNPSIRVIPEARGHFPTPQCS*NFRTRN
Trigger: ATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGT...TGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGTTTAAGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CAA 90 bp TTTACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCACGAGTTCTTGCTGTGTaGCCTAGGCTAGCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: FTCPFLSTNSHDPQDTFSRVLAV*PRLASN
Trigger: GTTTGAGGCTAGCCTAGGCAACACAGCAAGAACTCG...TGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS TCA 90 bp AAGAGGCAACACTTCTCGACTCGTTTTATAAGGCCAGCATCATCTTaGTACCAACACTTAGTTTTTCATGCCTTGGGTAATCCACCTTTC +
Preference number: 5 (lower is better)
Translates to: KRQHFSTRFIRPASS*YQHLVFHALGNPPF
Trigger: GAAAGGTGGATTACCCAAGGCATGAAAAACTAAGTGTTGGTATCAAGATGATGCTGGCCTTATAAAACGAGTCGAGAAGTGTTGCCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526952.1
CDS GCA 90 bp CACGTTTTCATTAAAGCAACTACTGGAAAGTCCACCTATAGAGGGTaGCTGAATCGTAACAGTTCTGACTCAATAGTCATGGCTACACAA +
Preference number: 5 (lower is better)
Translates to: HVFIKATTGKSTYRG*LNRNSSDSIVMATQ
Trigger: TTGTGTAGCCATGACTATTGAGTCAGAACTGTTACGATTCAGGCACCCTCTATAGGTGGACTTTCCAGTAGTTGCTTTAATGAAAACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CCA 90 bp TCGAGAGTGAAAACTACTGTTCTAGAGATTCTGATCCAGTCGGTTTaGACTGAGATCTGTACCTCAGGCATCTGTATGTTTAAAAAGTGC +
Preference number: 5 (lower is better)
Translates to: SRVKTTVLEILIQSV*TEICTSGICMFKKC
Trigger: GCACTTTTTAAACATACAGATGCCTGAGGTACAGATCTCAGTCCAAACCGACTGGATCAGAATCTCTAGAACAGTAGTTTTCACTCTCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS-3UTR CAA 90 bp CACAGTAATATCCCCAGTTGTTGCTACACATTCTGGATCGTGAACATATCTGAAGGCTCCAAATATTTCTaGAGATCATCCCAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: HSNIPSCCYTFWIVNISEGSKYF*RSSQAF
Trigger: AAAGGCCTGGGATGATCTCAAGAAATATTTGGAGCC...TTCAGATATGTTCACGATCCAGAATGTGTAGCAACAACTGGGGATATTACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR CAA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAAAACTACTCCAGGTCCTaGAACTTCTTCCACGTCACC +
Preference number: 5 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKNYSRS*NFFHVT
Trigger: GGTGACGTGGAAGAAGTTCAAGGACCTGGAGTAGTT...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CAA 90 bp ACCCATCCATCAGGGTCATTCCAGAAGCTAGAGGGCATTTTCCAAAGATTCAACATCATCTCTCACTTGTaGATAGGACAAAGACCAAAA +
Preference number: 5 (lower is better)
Translates to: THPSGSFQKLEGIFQRFNIISHL*IGQRPK
Trigger: TTTTGGTCTTTGTCCTATCAACAAGTGAGAGATGAT...GTTGAATCTTTGGAAAATGCCCTCTAGCTTCTGGAATGACCCTGATGGATGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS TCA 90 bp ACTTCATTTTTGTTTCGGCCCTCTGCAGCTTCCACTGCTATGTACTaGCTCAAACCAGTATGTATGCAAAAAGTTAAAGGGAGACAGTAT +
Preference number: 5 (lower is better)
Translates to: TSFLFRPSAASTAMY*LKPVCMQKVKGRQY
Trigger: ATACTGTCTCCCTTTAACTTTTTGCATACATACTGGTTTGAGTCAGTACATAGCAGTGGAAGCTGCAGAGGGCCGAAACAAAAATGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265651.8
ENST00000448981.6
ENST00000526785.5
ENST00000530013.5
ENST00000530401.5
ENST00000534136.5
CDS TCA 90 bp CGCACAGTGTGGCATTTATTCACTCCATTTCAGAATAAATCACTCTaGAATGGAGAGGGTATCAGATCATCTCAATTCAAACTAGGCAAC +
Preference number: 5 (lower is better)
Translates to: RTVWHLFTPFQNKSL*NGEGIRSSQFKLGN
Trigger: GTTGCCTAGTTTGAATTGAGATGATCTGATACCCTCTCCATTTCAGAGTGATTTATTCTGAAATGGAGTGAATAAATGCCACACTGTGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS GCA 90 bp AACTTCTCACCTCATCTCTTCTCAGTGTCTCTCAATCTTTTGCTTTaGTCTCCCATTTTAAGAGAAATCCCAGCTACTGGCATAGTATTA +
Preference number: 5 (lower is better)
Translates to: NFSPHLFSVSLNLLL*SPILREIPATGIVL
Trigger: TAATACTATGCCAGTAGCTGGGATTTCTCTTAAAATGGGAGAGCAAAGCAAAAGATTGAGAGACACTGAGAAGAGATGAGGTGAGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530013.5
ENST00000531080.5
CDS-3UTR CAA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAAGGCTCCAAATATTTCTaGAGATCATCCCAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKGSKYF*RSSQAF
Trigger: AAAGGCCTGGGATGATCTCAAGAAATATTTGGAGCC...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CAA 90 bp CAGACTGGTAGAGGACGAAAAAGCAGAACAATTCTCCATATCAGAAAACTAATAGGCTCCAAATATTTCTaGAGATCATCCCAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: QTGRGRKSRTILHIRKLIGSKYF*RSSQAF
Trigger: AAAGGCCTGGGATGATCTCAAGAAATATTTGGAGCC...TATTAGTTTTCTGATATGGAGAATTGTTCTGCTTTTTCGTCCTCTACCAGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CAA 90 bp AACTTCTTCCACGTCACCCTTAGCATTTGTTATTCTCCAATAGCGACTGTCCAAAACATATCTGAAAATTaGGTCTCTGATGATGGGGAA +
Preference number: 5 (lower is better)
Translates to: NFFHVTLSICYSPIATVQNISEN*VSDDGE
Trigger: TTCCCCATCATCAGAGACCAAATTTTCAGATATGTT...TTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532927.5
CDS-3UTR CAA 90 bp AACTATTTGCCTGGCTTATCTGCAGTGTTAACCCTACAAAGTCATGTAAATCAGCTTTTCAAACTGGAGTaGAAAATGTGTCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: NYLPGLSAVLTLQSHVNQLFKLE*KMCQLW
Trigger: CCAGAGCTGACACATTTTCAACTCCAGTTTGAAAAG...CTGATTTACATGACTTTGTAGGGTTAACACTGCAGATAAGCCAGGCAAATAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CAA 90 bp ACTGCCTGCCAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTAACATATCTGAAAATTaGGTCTCTGATGATGGGGAA +
Preference number: 5 (lower is better)
Translates to: TACQNTPQCSLNFRTRNINISEN*VSDDGE
Trigger: TTCCCCATCATCAGAGACCAAATTTTCAGATATGTT...AATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTGGCAGGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CAA 90 bp GACACGCCAAATATGAATTTCCATAGACTTGAACAGTGGATTCTCACAACACACAGTTTCTCTCTATCCTaGTGCAGGTATTTTAAATCC +
Preference number: 5 (lower is better)
Translates to: DTPNMNFHRLEQWILTTHSFSLS*CRYFKS
Trigger: GGATTTAAAATACCTGCACAAGGATAGAGAGAAACT...GTGTGTTGTGAGAATCCACTGTTCAAGTCTATGGAAATTCATATTTGGCGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CAA 90 bp AAATCTTCACTTCCAAACGCACACTGTAGATTCTTTTCACTAGATATGCCACACTGGAGCCTCATTTACTaGTCCATTTCTCTCAACAAA +
Preference number: 5 (lower is better)
Translates to: KSSLPNAHCRFFSLDMPHWSLIY*SISLNK
Trigger: TTTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCA...GTGTGGCATATCTAGTGAAAAGAATCTACAGTGTGCGTTTGGAAGTGAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CAA 90 bp ACTGCCTGCCAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTGTTTGTCTCTTTGAATaGGAATGTAAATTCCAAGGC +
Preference number: 5 (lower is better)
Translates to: TACQNTPQCSLNFRTRNIVCLFE*ECKFQG
Trigger: GCCTTGGAATTTACATTCCAATTCAAAGAGACAAAC...AATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTGGCAGGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CAA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAATGGAGCCTCATTTACTaGTCCATTTCTCTCAACAAA +
Preference number: 5 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKWSLIY*SISLNK
Trigger: TTTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCA...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CAA 90 bp GTGTCAGCTCTGGATCAGATTAATATCATGTCCATCTTTCCAAACTTAAACCCAGAATGGACAAATTCCTaGAAAGGCACAAATTACCAA +
Preference number: 5 (lower is better)
Translates to: VSALDQINIMSIFPNLNPEWTNS*KGTNYQ
Trigger: TTGGTAATTTGTGCCTTTCAAGGAATTTGTCCATTC...TGGGTTTAAGTTTGGAAAGATGGACATGATATTAATCTGATCCAGAGCTGACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CAA 90 bp ATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCCATTTCTCTCAACAAATCATCTCTCACTTGTaGATAGGACAAAGACCAAAA +
Preference number: 5 (lower is better)
Translates to: ILWLETMEPHLLVHFSQQIISHL*IGQRPK
Trigger: TTTTGGTCTTTGTCCTATCAACAAGTGAGAGATGAT...TTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CAA 90 bp CAAAACACACCTCAATGCTCTTTGAACTTTAGGACAAGGAATATTATCAGCGATACAATCATCTCTCACTaGTTGATAGGACAAAGACCA +
Preference number: 5 (lower is better)
Translates to: QNTPQCSLNFRTRNIISDTIISH*LIGQRP
Trigger: TGGTCTTTGTCCTATCAACAAGTGAGAGATGATTGT...ATCGCTGATAATATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGTGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530401.5
ENST00000534136.5
CDS-3UTR CAA 90 bp TTTACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAACACCTCAATGCTCTTaGAACTTTAGGACAAGGAAT +
Preference number: 5 (lower is better)
Translates to: FTCPFLSTNSHDPQDTFSTPQCS*NFRTRN
Trigger: ATTCCTTGTCCTAAAGTTCAAAGAGCATTGAGGTGT...TGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS-3UTR CAA 90 bp ACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAAAAACATATCTGAAAATTaGGTCTCTGATGATGGGGAA +
Preference number: 5 (lower is better)
Translates to: TCPFLSTNSHDPQDTFSKNISEN*VSDDGE
Trigger: TTCCCCATCATCAGAGACCAAATTTTCAGATATGTT...TTTTGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CAA 90 bp TTTACTTGTCCATTTCTCTCAACAAATTCACATGACCCCCAAGATACTTTCTCAAACATATCTGAAAATTaGGTCTCTGATGATGGGGAA +
Preference number: 5 (lower is better)
Translates to: FTCPFLSTNSHDPQDTFSNISEN*VSDDGE
Trigger: TTCCCCATCATCAGAGACCAAATTTTCAGATATGTT...TGAGAAAGTATCTTGGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530401.5
CDS-3UTR CAA 90 bp TTTAAAACAGCAGAAATTCTCTGGTTAGAGACTATGGAGCCTCATTTACTTGTCGAATGGACAAATTCCTaGAAAGGCACAAATTACCAA +
Preference number: 5 (lower is better)
Translates to: FKTAEILWLETMEPHLLVEWTNS*KGTNYQ
Trigger: TTGGTAATTTGTGCCTTTCAAGGAATTTGTCCATTC...GACAAGTAAATGAGGCTCCATAGTCTCTAACCAGAGAATTTCTGCTGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530401.5
CDS GCA 90 bp CCATATATGCCATTGGAGTTAATCTCAAGTCAAGGAGTTGTCCTATaGTTATTATCAGGACAATACTCATTTCTACATATAGGAAGAAAG +
Preference number: 5 (lower is better)
Translates to: PYMPLELISSQGVVL*LLSGQYSFLHIGRK
Trigger: CTTTCTTCCTATATGTAGAAATGAGTATTGTCCTGATAATAAGCATAGGACAACTCCTTGACTTGAGATTAACTCCAATGGCATATATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS GCA 72 bp CCTGCGGGGCCAGCGGGGGTCCGCGGAGCGCGGCGGTaGGGCACGAGGGCCACTACCTCCTTCTCTTGCAAG +
Preference number: 6 (lower is better)
Translates to: PAGPAGVRGARR*GTRATTSFSCK
Trigger: CTTGCAAGAGAAGGAGGTAGTGGCCCTCGTGCCGCACCGCCGCGCTCCGCGGACCCCCGCTGGCCCCGCAGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CCA 72 bp GCGACTCTAGGGTCAGCGGCGCCGTCTCGGTCTCCATaGCCGCCATCTTGCCTGGCCCGGTGCAGGTCTGGC +
Preference number: 6 (lower is better)
Translates to: ATLGSAAPSRSP*PPSCLARCRSG
Trigger: GCCAGACCTGCACCGGGCCAGGCAAGATGGCGGCCATGGAGACCGAGACGGCGCCGCTGACCCTAGAGTCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448981.6
ENST00000530013.5
CDS CAA 90 bp CCGCGGAGCGCGGCGGTGCGGCACGAGGGCCACTACCTCCTTCTCTaGCAAGTGGGCCTCACCGAGGCCTGGGAGAGAGATATCTCGTCG +
Preference number: 6 (lower is better)
Translates to: PRSAAVRHEGHYLLL*QVGLTEAWERDISS
Trigger: CGACGAGATATCTCTCTCCCAGGCCTCGGTGAGGCCCACTTGCAAGAGAAGGAGGTAGTGGCCCTCGTGCCGCACCGCCGCGCTCCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CAA 72 bp GCGGCGGTGCGGCACGAGGGCCACTACCTCCTTCTCTaGCAAGTGGGCCTCACCGAGGCCTGGGAGAGAGAT +
Preference number: 6 (lower is better)
Translates to: AAVRHEGHYLLL*QVGLTEAWERD
Trigger: ATCTCTCTCCCAGGCCTCGGTGAGGCCCACTTGCAAGAGAAGGAGGTAGTGGCCCTCGTGCCGCACCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS GCA 72 bp CGGCGGTGCGGCACGAGGGCCACTACCTCCTTCTCTTaGAAGTGGGCCTCACCGAGGCCTGGGAGAGAGATA +
Preference number: 6 (lower is better)
Translates to: RRCGTRATTSFS*KWASPRPGREI
Trigger: TATCTCTCTCCCAGGCCTCGGTGAGGCCCACTTGCAAGAGAAGGAGGTAGTGGCCCTCGTGCCGCACCGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CCA 72 bp AAGTCCGAAAGTGAGCCCGGACAGCGATTCTGGCGCTaGGGAAGTCGCGCCAGGGGAGTAAGGGGTTGCCTA +
Preference number: 6 (lower is better)
Translates to: KSESEPGQRFWR*GSRARGVRGCL
Trigger: TAGGCAACCCCTTACTCCCCTGGCGCGACTTCCCCAGCGCCAGAATCGCTGTCCGGGCTCACTTTCGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CCA 72 bp CCACCCCCTGTCAAGGGTGTAAACAATCCTGACAGCTaGGGGGCGGGCTGGCAGCGCCATTTCTTCCACCAC +
Preference number: 6 (lower is better)
Translates to: PPPVKGVNNPDS*GAGWQRHFFHH
Trigger: GTGGTGGAAGAAATGGCGCTGCCAGCCCGCCCCCCAGCTGTCAGGATTGTTTACACCCTTGACAGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CCA 72 bp TACCTCCTTCTCTTGCAAGTGGGCCTCACCGAGGCCTaGGAGAGAGATATCTCGTCGCTTCTCATACCTGGG +
Preference number: 6 (lower is better)
Translates to: YLLLLQVGLTEA*ERDISSLLIPG
Trigger: CCCAGGTATGAGAAGCGACGAGATATCTCTCTCCCAGGCCTCGGTGAGGCCCACTTGCAAGAGAAGGAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS TCA 72 bp ACAGCAAAACAATTCTCACGCACTGAAGTCCGAAAGTaGGCCCGGACAGCGATTCTGGCGCTGGGGAAGTCG +
Preference number: 6 (lower is better)
Translates to: TAKQFSRTEVRK*ARTAILALGKS
Trigger: CGACTTCCCCAGCGCCAGAATCGCTGTCCGGGCTCACTTTCGGACTTCAGTGCGTGAGAATTGTTTTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CAA 72 bp ACGCCAGCCTTCTGTATCTTCCACCAGGCCATGCTGTaGAACAGTACCGTTCAGCAGTCCCGTCAATCTCTG +
Preference number: 6 (lower is better)
Translates to: TPAFCIFHQAML*NSTVQQSRQSL
Trigger: CAGAGATTGACGGGACTGCTGAACGGTACTGTTCAACAGCATGGCCTGGTGGAAGATACAGAAGGCTGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS TCA 72 bp AGGAGCAATGCTGACAGCAAAACAATTCTCACGCACTaGAGTCCGAAAGTGAGCCCGGACAGCGATTCTGGC +
Preference number: 6 (lower is better)
Translates to: RSNADSKTILTH*SPKVSPDSDSG
Trigger: GCCAGAATCGCTGTCCGGGCTCACTTTCGGACTTCAGTGCGTGAGAATTGTTTTGCTGTCAGCATTGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS TCA 72 bp CTCTTACTTCCTCACCTTGGTTCCCAAGGTCCTGCATaGTCTCACCACCCTCATCTCATCACTGTCTGTGAG +
Preference number: 6 (lower is better)
Translates to: LLLPHLGSQGPA*SHHPHLITVCE
Trigger: CTCACAGACAGTGATGAGATGAGGGTGGTGAGATCATGCAGGACCTTGGGAACCAAGGTGAGGAAGTAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS TCA 72 bp GCCATTTCTTCCACCACCCCAGACAGTCCCAAGTTCTaGAGAAACTGGGCATTGAACCACCCTTATCAGCAA +
Preference number: 6 (lower is better)
Translates to: AISSTTPDSPKF*RNWALNHPYQQ
Trigger: TTGCTGATAAGGGTGGTTCAATGCCCAGTTTCTTCAGAACTTGGGACTGTCTGGGGTGGTGGAAGAAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS TCA 72 bp CCCCAGACAGTCCCAAGTTCTGAAGAAACTGGGCATTaGACCACCCTTATCAGCAACCGGTGTTTATTTCTG +
Preference number: 6 (lower is better)
Translates to: PQTVPSSEETGH*TTLISNRCLFL
Trigger: CAGAAATAAACACCGGTTGCTGATAAGGGTGGTTCAATGCCCAGTTTCTTCAGAACTTGGGACTGTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS GCA 72 bp AAAGTTAAAGGGAGACAGTATTTCAGTCCCTGTCTCTaGTGGAATCCTCCGGCAGCTGTATCGACGTCTAAC +
Preference number: 6 (lower is better)
Translates to: KVKGRQYFSPCL*WNPPAAVSTSN
Trigger: GTTAGACGTCGATACAGCTGCCGGAGGATTCCAGCAGAGACAGGGACTGAAATACTGTCTCCCTTTAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265651.8
ENST00000448981.6
ENST00000526785.5
ENST00000530013.5
ENST00000530401.5
ENST00000534136.5
CDS CCA 72 bp GTTAAAGGGAGACAGTATTTCAGTCCCTGTCTCTGCTaGAATCCTCCGGCAGCTGTATCGACGTCTAACAAA +
Preference number: 6 (lower is better)
Translates to: VKGRQYFSPCLC*NPPAAVSTSNK
Trigger: TTTGTTAGACGTCGATACAGCTGCCGGAGGATTCCAGCAGAGACAGGGACTGAAATACTGTCTCCCTTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265651.8
ENST00000448981.6
ENST00000526785.5
ENST00000530013.5
ENST00000530401.5
ENST00000534136.5
CDS CAA 90 bp CTTGCCCACTGGACTGTAAGCTCCATAAGAGTTGCCTTATCTGCGTaGTTCACTACTGTACCCTCAACACTTAACAGACTGGCACATAGC +
Preference number: 6 (lower is better)
Translates to: LAHWTVSSIRVALSA*FTTVPSTLNRLAHS
Trigger: GCTATGTGCCAGTCTGTTAAGTGTTGAGGGTACAGTAGTGAACAACGCAGATAAGGCAACTCTTATGGAGCTTACAGTCCAGTGGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CAA 90 bp CCAAACACAAAACAAATCTCGCCCACCTATCCTAAGAGGGCGACTTaGCATCCTCTGCAAATATATACGGTAGCACAGGAAACTCACAGC +
Preference number: 6 (lower is better)
Translates to: PNTKQISPTYPKRAT*HPLQIYTVAQETHS
Trigger: GCTGTGAGTTTCCTGTGCTACCGTATATATTTGCAGAGGATGCAAAGTCGCCCTCTTAGGATAGGTGGGCGAGATTTGTTTTGTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS TCA 72 bp AGGCAGCCCTTACAATCAAGAAGCACGCCATCTACCTaGCATGGCAAATCAATTCTGCAGGAAGAAGGTAGA +
Preference number: 6 (lower is better)
Translates to: RQPLQSRSTPST*HGKSILQEEGR
Trigger: TCTACCTTCTTCCTGCAGAATTGATTTGCCATGTCAGGTAGATGGCGTGCTTCTTGATTGTAAGGGCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS TCA 72 bp AAAGTGCCACAGGCCATTCTGATGCACAGGTCATTCTaGCGCACAGTGTGGCATTTATTCACTCCATTTCAG +
Preference number: 6 (lower is better)
Translates to: KVPQAILMHRSF*RTVWHLFTPFQ
Trigger: CTGAAATGGAGTGAATAAATGCCACACTGTGCGTCAGAATGACCTGTGCATCAGAATGGCCTGTGGCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS TCA 72 bp GTAGCACTGCTGGACCACAGCCACTATGGTAATCTCTaGAAGTGTGTGCTATGCAAAAATAACAACGAGGGC +
Preference number: 6 (lower is better)
Translates to: VALLDHSHYGNL*KCVLCKNNNEG
Trigger: GCCCTCGTTGTTATTTTTGCATAGCACACACTTTCAGAGATTACCATAGTGGCTGTGGTCCAGCAGTGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530013.5
CDS TCA 72 bp CTTACCTTAGCACTCAGCTGCCTTCCATTTATAAACTaGGTAGCACTGCTGGACCACAGCCACTATGGTAAT +
Preference number: 6 (lower is better)
Translates to: LTLALSCLPFIN*VALLDHSHYGN
Trigger: ATTACCATAGTGGCTGTGGTCCAGCAGTGCTACTCAGTTTATAAATGGAAGGCAGCTGAGTGCTAAGGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530013.5
CDS GCA 72 bp AACATACTTTTCCCTCTGCCAGAACTGCATATGCCCTaGTTCATATATGGCAGCTCCTTCCGATTTGATCAC +
Preference number: 6 (lower is better)
Translates to: NILFPLPELHMP*FIYGSSFRFDH
Trigger: GTGATCAAATCGGAAGGAGCTGCCATATATGAAGCAGGGCATATGCAGTTCTGGCAGAGGGAAAAGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CAA 72 bp AAACAAATCTCGCCCACCTATCCTAAGAGGGCGACTTaGCATCCTCTGCAAATATATACGGTAGCACAGGAA +
Preference number: 6 (lower is better)
Translates to: KQISPTYPKRAT*HPLQIYTVAQE
Trigger: TTCCTGTGCTACCGTATATATTTGCAGAGGATGCAAAGTCGCCCTCTTAGGATAGGTGGGCGAGATTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CAA 90 bp AAAGAGGCAACACTTCTCGACTCGTTTTATAAGGCCAGCATCATCTaGATACCAACACCTTTCAGAGATAAAACCATCCGAGGACACCTG +
Preference number: 6 (lower is better)
Translates to: KEATLLDSFYKASII*IPTPFRDKTIRGHL
Trigger: CAGGTGTCCTCGGATGGTTTTATCTCTGAAAGGTGTTGGTATCAAGATGATGCTGGCCTTATAAAACGAGTCGAGAAGTGTTGCCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529137.1
ENST00000533103.5
CDS TCA 72 bp TTGTTTCGGCCCTCTGCAGCTTCCACTGCTATGTACTaGCTCAAACCAGTATGTATGCAAAAAGTTAAAGGG +
Preference number: 6 (lower is better)
Translates to: LFRPSAASTAMY*LKPVCMQKVKG
Trigger: CCCTTTAACTTTTTGCATACATACTGGTTTGAGTCAGTACATAGCAGTGGAAGCTGCAGAGGGCCGAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265651.8
ENST00000448981.6
ENST00000526785.5
ENST00000530013.5
ENST00000530401.5
ENST00000534136.5
CDS GCA 72 bp TGGACCACAGCCACTATGGTAATCTCTGAAAGTGTGTaGTATGCAAAAATAACAACGAGGGCAATGAGCACA +
Preference number: 6 (lower is better)
Translates to: WTTATMVISESV*YAKITTRAMST
Trigger: TGTGCTCATTGCCCTCGTTGTTATTTTTGCATAGCACACACTTTCAGAGATTACCATAGTGGCTGTGGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530013.5
CDS CAA 72 bp AAGTGCAAGTGTGTTGTATGCTGGCAGAGGTCTGATTaGGTTAGAATGGATGGTGCAAATGTGATAGTGGTG +
Preference number: 6 (lower is better)
Translates to: KCKCVVCWQRSD*VRMDGANVIVV
Trigger: CACCACTATCACATTTGCACCATCCATTCTAACCAAATCAGACCTCTGCCAGCATACAACACACTTGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CAA 72 bp TGGACTGTAAGCTCCATAAGAGTTGCCTTATCTGCGTaGTTCACTACTGTACCCTCAACACTTAACAGACTG +
Preference number: 6 (lower is better)
Translates to: WTVSSIRVALSA*FTTVPSTLNRL
Trigger: CAGTCTGTTAAGTGTTGAGGGTACAGTAGTGAACAACGCAGATAAGGCAACTCTTATGGAGCTTACAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS GCA 72 bp AACTTCATTTTTGTTTCGGCCCTCTGCAGCTTCCACTaGTATGTACTGACTCAAACCAGTATGTATGCAAAA +
Preference number: 6 (lower is better)
Translates to: NFIFVSALCSFH*YVLTQTSMYAK
Trigger: TTTTGCATACATACTGGTTTGAGTCAGTACATAGCAGTGGAAGCTGCAGAGGGCCGAAACAAAAATGAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265651.8
ENST00000448981.6
ENST00000526785.5
ENST00000530013.5
ENST00000530401.5
ENST00000534136.5
CDS GCA 72 bp ATTAAAGCAACTACTGGAAAGTCCACCTATAGAGGGTaGCTGAATCGTAACAGTTCTGACTCAATAGTCATG +
Preference number: 6 (lower is better)
Translates to: IKATTGKSTYRG*LNRNSSDSIVM
Trigger: CATGACTATTGAGTCAGAACTGTTACGATTCAGGCACCCTCTATAGGTGGACTTTCCAGTAGTTGCTTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS CCA 72 bp AAAACTACTGTTCTAGAGATTCTGATCCAGTCGGTTTaGACTGAGATCTGTACCTCAGGCATCTGTATGTTT +
Preference number: 6 (lower is better)
Translates to: KTTVLEILIQSV*TEICTSGICMF
Trigger: AAACATACAGATGCCTGAGGTACAGATCTCAGTCCAAACCGACTGGATCAGAATCTCTAGAACAGTAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526785.5
ENST00000526952.1
CDS CAA 72 bp ACACTTCTCGACTCGTTTTATAAGGCCAGCATCATCTaGATACCAACACCTTTCAGAGATAAAACCATCCGA +
Preference number: 6 (lower is better)
Translates to: TLLDSFYKASII*IPTPFRDKTIR
Trigger: TCGGATGGTTTTATCTCTGAAAGGTGTTGGTATCAAGATGATGCTGGCCTTATAAAACGAGTCGAGAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529137.1
ENST00000533103.5
CDS CAA 90 bp TGCATTAACTTCTCACCTCATCTCTTCTCAGTGTCTCTCAATCTTTaGCTTTGCTCTCCCATTTTAAGAGAAATCCCAGCTACTGGCATA +
Preference number: 6 (lower is better)
Translates to: CINFSPHLFSVSLNL*LCSPILREIPATGI
Trigger: TATGCCAGTAGCTGGGATTTCTCTTAAAATGGGAGAGCAAAGCAAAAGATTGAGAGACACTGAGAAGAGATGAGGTGAGAAGTTAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530013.5
ENST00000531080.5
CDS TCA 72 bp CACTTCTCGACTCGTTTTATAAGGCCAGCATCATCTTaGTACCAACACTTAGTTTTTCATGCCTTGGGTAAT +
Preference number: 6 (lower is better)
Translates to: HFSTRFIRPASS*YQHLVFHALGN
Trigger: ATTACCCAAGGCATGAAAAACTAAGTGTTGGTATCAAGATGATGCTGGCCTTATAAAACGAGTCGAGAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526952.1
CDS GCA 72 bp CTTCCACTGCTATGTACTGACTCAAACCAGTATGTATaGAAAAAGTTAAAGGGAGACAGTATTTCAGTCCCT +
Preference number: 6 (lower is better)
Translates to: LPLLCTDSNQYV*KKLKGDSISVP
Trigger: AGGGACTGAAATACTGTCTCCCTTTAACTTTTTGCATACATACTGGTTTGAGTCAGTACATAGCAGTGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265651.8
ENST00000448981.6
ENST00000526785.5
ENST00000530013.5
ENST00000530401.5
ENST00000534136.5
CDS CAA 72 bp AAATTAACTTTTGTAAACATAGGAATCCCTCCAGTTTaGTGCATTCAGTTTCCATACCCTCTTCTTGATTCC +
Preference number: 6 (lower is better)
Translates to: KLTFVNIGIPPV*CIQFPYPLLDS
Trigger: GGAATCAAGAAGAGGGTATGGAAACTGAATGCACAAAACTGGAGGGATTCCTATGTTTACAAAAGTTAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526785.5
CDS TCA 72 bp TGGCATTTATTCACTCCATTTCAGAATAAATCACTCTaGAATGGAGAGGGTATCAGATCATCTCAATTCAAA +
Preference number: 6 (lower is better)
Translates to: WHLFTPFQNKSL*NGEGIRSSQFK
Trigger: TTTGAATTGAGATGATCTGATACCCTCTCCATTTCAGAGTGATTTATTCTGAAATGGAGTGAATAAATGCCA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526785.5