RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO25 (Homo sapiens)

Ensembl gene IDs: ENSG00000147364

Ensembl transcript IDs: ENST00000276326.9, ENST00000350302.8, ENST00000352684.2, ENST00000382824.5, ENST00000517464.1, ENST00000519274.1, ENST00000519376.5, ENST00000524015.1

Found 700 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTTATGGTCCAAGAGCCAGCCCAGGACCCCTGTGGCACCAGCAGTaGCTTCTCCTGCTTGCCCCTCCAGCTGGTGCTCTGGGCATCTCT +
Preference number: 1 (lower is better)
Translates to: GYGPRASPGPLWHQQ*LLLLAPPAGALGIS
Trigger: AGAGATGCCCAGAGCACCAGCTGGAGGGGCAAGCAGGAGAAGGCACTGCTGGTGCCACAGGGGTCCTGGGCTGGCTCTTGGACCATAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 90 bp CAAGAGCCAGCCCAGGACCCCTGTGGCACCAGCAGTGCCTTCTCCTaGTTGCCCCTCCAGCTGGTGCTCTGGGCATCTCTGTTCTTTGTC +
Preference number: 1 (lower is better)
Translates to: QEPAQDPCGTSSAFS*LPLQLVLWASLFFV
Trigger: GACAAAGAACAGAGATGCCCAGAGCACCAGCTGGAGGGGCAAGCAGGAGAAGGCACTGCTGGTGCCACAGGGGTCCTGGGCTGGCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp CCAAAAAGTTTGGAACACAGCCACATGCACTGGTGCGTGGCCCCCTaGTGGCGGCTTCATGCCACTACTGCCAAGTGGCAAGAGAGCCCC +
Preference number: 1 (lower is better)
Translates to: PKSLEHSHMHWCVAP*WRLHATTAKWQESP
Trigger: GGGGCTCTCTTGCCACTTGGCAGTAGTGGCATGAAGCCGCCACCAGGGGGCCACGCACCAGTGCATGTGGCTGTGTTCCAAACTTTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 90 bp CCCACAGCTTGTCCCTCGAACGCACCTGCAGGAGGCTGTGACCCATaGAGTGGCAATGCGGCTAGCTGTGTCCATGGCCTGTGGAAATAT +
Preference number: 1 (lower is better)
Translates to: PTACPSNAPAGGCDP*SGNAASCVHGLWKY
Trigger: ATATTTCCACAGGCCATGGACACAGCTAGCCGCATTGCCACTGCATGGGTCACAGCCTCCTGCAGGTGCGTTCGAGGGACAAGCTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 90 bp AACCTTTCAATCTCTCCCCAGCAATGTAAGCCATCCCTGCTTACCTaGCCAGCTCCCACAGCTTGTCCCTCGAACGCACCTGCAGGAGGC +
Preference number: 1 (lower is better)
Translates to: NLSISPQQCKPSLLT*PAPTACPSNAPAGG
Trigger: GCCTCCTGCAGGTGCGTTCGAGGGACAAGCTGTGGGAGCTGGGCAGGTAAGCAGGGATGGCTTACATTGCTGGGGAGAGATTGAAAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 90 bp TTCATCTCACAGATGCTGAGGGCGAGAATGGCAGCAGCCATACACTaGCTGAGTTTAGAGAGGACTGCTGGGGGTGCATGTGCAGGTGCC +
Preference number: 1 (lower is better)
Translates to: FISQMLRARMAAAIH*LSLERTAGGACAGA
Trigger: GGCACCTGCACATGCACCCCCAGCAGTCCTCTCTAAACTCAGGCAGTGTATGGCTGCTGCCATTCTCGCCCTCAGCATCTGTGAGATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp GGTGGCGGCTTCATGCCACTACTGCCAAGTGGCAAGAGAGCCCCATaGCTGGAAAAGCCAACAATCTTTACCATCTGCTCCAAGCCCTGC +
Preference number: 1 (lower is better)
Translates to: GGGFMPLLPSGKRAP*LEKPTIFTICSKPC
Trigger: GCAGGGCTTGGAGCAGATGGTAAAGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCATGAAGCCGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 90 bp GCAGGGTGGATGCTGGTGTCAGCCATAGAGGGCCCCAATGGCTGGTaGTGGTTAGTCATGTATGCAGGTCCTTCTTTTTCCTCCTACCTG +
Preference number: 1 (lower is better)
Translates to: AGWMLVSAIEGPNGW*WLVMYAGPSFSSYL
Trigger: CAGGTAGGAGGAAAAAGAAGGACCTGCATACATGACTAACCAGCACCAGCCATTGGGGCCCTCTATGGCTGACACCAGCATCCACCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp AACCTGTGCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTaGGCTGCGTGTGCACACTTCATACCCCGATCCATAATCCCTAAG +
Preference number: 1 (lower is better)
Translates to: NLCWMPRSTETTARC*AACAHFIPRSIIPK
Trigger: CTTAGGGATTATGGATCGGGGTATGAAGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR CCA 90 bp ACAAGAGCATTTCAAAGAAACCGCATCCTCAGTGAACGCTGGTTATaGTCCAAGAGCCAGCCCAGGACCCCTGTGGCACCAGCAGTGCCT +
Preference number: 1 (lower is better)
Translates to: TRAFQRNRILSERWL*SKSQPRTPVAPAVP
Trigger: AGGCACTGCTGGTGCCACAGGGGTCCTGGGCTGGCTCTTGGACCATAACCAGCGTTCACTGAGGATGCGGTTTCTTTGAAATGCTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 90 bp AGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACTCACTATaGGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATG +
Preference number: 1 (lower is better)
Translates to: RGFRGVSTHLTEHSL*ALHRQQDSQSPIGM
Trigger: CATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR CCA 90 bp GGGTGGATGCTGGTGTCAGCCATAGAGGGCCCCAATGGCTGGTGCTaGTTAGTCATGTATGCAGGTCCTTCTTTTTCCTCCTACCTGTTG +
Preference number: 1 (lower is better)
Translates to: GWMLVSAIEGPNGWC*LVMYAGPSFSSYLL
Trigger: CAACAGGTAGGAGGAAAAAGAAGGACCTGCATACATGACTAACCAGCACCAGCCATTGGGGCCCTCTATGGCTGACACCAGCATCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp AGTGCAGGGTGGATGCTGGTGTCAGCCATAGAGGGCCCCAATGGCTaGTGCTGGTTAGTCATGTATGCAGGTCCTTCTTTTTCCTCCTAC +
Preference number: 1 (lower is better)
Translates to: SAGWMLVSAIEGPNG*CWLVMYAGPSFSSY
Trigger: GTAGGAGGAAAAAGAAGGACCTGCATACATGACTAACCAGCACCAGCCATTGGGGCCCTCTATGGCTGACACCAGCATCCACCCTGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp GGAAGAACAAGAGCATTTCAAAGAAACCGCATCCTCAGTGAACGCTaGTTATGGTCCAAGAGCCAGCCCAGGACCCCTGTGGCACCAGCA +
Preference number: 1 (lower is better)
Translates to: GRTRAFQRNRILSER*LWSKSQPRTPVAPA
Trigger: TGCTGGTGCCACAGGGGTCCTGGGCTGGCTCTTGGACCATAACCAGCGTTCACTGAGGATGCGGTTTCTTTGAAATGCTCTTGTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp TTTATTGTCCAAAAAGTTTGGAACACAGCCACATGCACTGGTGCGTaGCCCCCTGGTGGCGGCTTCATGCCACTACTGCCAAGTGGCAAG +
Preference number: 1 (lower is better)
Translates to: FIVQKVWNTATCTGA*PPGGGFMPLLPSGK
Trigger: CTTGCCACTTGGCAGTAGTGGCATGAAGCCGCCACCAGGGGGCCACGCACCAGTGCATGTGGCTGTGTTCCAAACTTTTTGGACAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp TGTGACCCATGCAGTGGCAATGCGGCTAGCTGTGTCCATGGCCTGTaGAAATATGCCAGCCCAGCAGAACAGCTGGAATCCTACACTATT +
Preference number: 1 (lower is better)
Translates to: CDPCSGNAASCVHGL*KYASPAEQLESYTI
Trigger: AATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGCCATGGACACAGCTAGCCGCATTGCCACTGCATGGGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
3UTR CCA 90 bp TATGAGTGCAGGGTGGATGCTGGTGTCAGCCATAGAGGGCCCCAATaGCTGGTGCTGGTTAGTCATGTATGCAGGTCCTTCTTTTTCCTC +
Preference number: 1 (lower is better)
Translates to: YECRVDAGVSHRGPQ*LVLVSHVCRSFFFL
Trigger: GAGGAAAAAGAAGGACCTGCATACATGACTAACCAGCACCAGCCATTGGGGCCCTCTATGGCTGACACCAGCATCCACCCTGCACTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp GAAGACAGAAGCAGCAATTCTGTTGAGATACATATGAGTGCAGGGTaGATGCTGGTGTCAGCCATAGAGGGCCCCAATGGCTGGTGCTGG +
Preference number: 1 (lower is better)
Translates to: EDRSSNSVEIHMSAG*MLVSAIEGPNGWCW
Trigger: CCAGCACCAGCCATTGGGGCCCTCTATGGCTGACACCAGCATCCACCCTGCACTCATATGTATCTCAACAGAATTGCTGCTTCTGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 90 bp GCAAAAGGAAGTTGTAACTGGGTGTCAAGAGACACCAGCCCTGAGTaGGCAGCGCAGACTGAGAACAGGTCCGAGAATGACTGGAGATTC +
Preference number: 1 (lower is better)
Translates to: AKGSCNWVSRDTSPE*AAQTENRSENDWRF
Trigger: GAATCTCCAGTCATTCTCGGACCTGTTCTCAGTCTGCGCTGCTCACTCAGGGCTGGTGTCTCTTGACACCCAGTTACAACTTCCTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 90 bp CTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTACGTCATaGAGTAAACCACGACAGCTACAAATCGGTCTGCTCCTGAGAGGC +
Preference number: 1 (lower is better)
Translates to: LYSTHTQCIQRACTS*SKPRQLQIGLLLRG
Trigger: GCCTCTCAGGAGCAGACCGATTTGTAGCTGTCGTGGTTTACTGCATGACGTACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 90 bp GTCAGCCATAGAGGGCCCCAATGGCTGGTGCTGGTTAGTCATGTATaGAGGTCCTTCTTTTTCCTCCTACCTGTTGCTAATCCCTTGGCT +
Preference number: 1 (lower is better)
Translates to: VSHRGPQWLVLVSHV*RSFFFLLPVANPLA
Trigger: AGCCAAGGGATTAGCAACAGGTAGGAGGAAAAAGAAGGACCTGCATACATGACTAACCAGCACCAGCCATTGGGGCCCTCTATGGCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 90 bp TTACTTAGGAAGAACAAGAGCATTTCAAAGAAACCGCATCCTCAGTaGACGCTGGTTATGGTCCAAGAGCCAGCCCAGGACCCCTGTGGC +
Preference number: 1 (lower is better)
Translates to: LLRKNKSISKKPHPQ*TLVMVQEPAQDPCG
Trigger: GCCACAGGGGTCCTGGGCTGGCTCTTGGACCATAACCAGCGTTCACTGAGGATGCGGTTTCTTTGAAATGCTCTTGTTCTTCCTAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 90 bp CCATGGCTGGAAAAGCCAACAATCTTTACCATCTGCTCCAAGCCCTaGTTCACTCCCCTGTGTGTACCTATCCTTGCAGCCTCAAATTCC +
Preference number: 1 (lower is better)
Translates to: PWLEKPTIFTICSKP*FTPLCVPILAASNS
Trigger: GGAATTTGAGGCTGCAAGGATAGGTACACACAGGGGAGTGAAGCAGGGCTTGGAGCAGATGGTAAAGATTGTTGGCTTTTCCAGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 90 bp AGACACAGTTTGCTGTGTACAGCCCTGTACAGTACGCACACACAGTaGATACAGAGAGCCTGTACGTCATGCAGTAAACCACGACAGCTA +
Preference number: 1 (lower is better)
Translates to: RHSLLCTALYSTHTQ*IQRACTSCSKPRQL
Trigger: TAGCTGTCGTGGTTTACTGCATGACGTACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCAAACTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 90 bp CAGCTGGTGCTCTGGGCATCTCTGTTCTTTGTCACTCTGTGGATTTaGGCCAGTGAGGATTGGAAGGAAGAGGACCAAGTACAAAAAGGA +
Preference number: 1 (lower is better)
Translates to: QLVLWASLFFVTLWI*ASEDWKEEDQVQKG
Trigger: TCCTTTTTGTACTTGGTCCTCTTCCTTCCAATCCTCACTGGCTCAAATCCACAGAGTGACAAAGAACAGAGATGCCCAGAGCACCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 90 bp AGGTCCGAGAATGACTGGAGATTCTATCTTGAGAGTGTCTGGCATTaGCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGGCT +
Preference number: 1 (lower is better)
Translates to: RSENDWRFYLESVWH*LSQERWASETYYLA
Trigger: AGCCAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTCAAGATAGAATCTCCAGTCATTCTCGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp ATTAAAAGAGACAAAGGAGAACAGAGGCTGCCAGGGGCTGGTGGATaGGGAATAGGGAGTTGGTGCTTAATGGGTACAGAGCTTCAGTTT +
Preference number: 1 (lower is better)
Translates to: IKRDKGEQRLPGAGG*GIGSWCLMGTELQF
Trigger: AAACTGAAGCTCTGTACCCATTAAGCACCAACTCCCTATTCCCCATCCACCAGCCCCTGGCAGCCTCTGTTCTCCTTTGTCTCTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 90 bp GCTCTGGGCATCTCTGTTCTTTGTCACTCTGTGGATTTGAGCCAGTaGGGATTGGAAGGAAGAGGACCAAGTACAAAAAGGACAACTAGG +
Preference number: 1 (lower is better)
Translates to: ALGISVLCHSVDLSQ*GLEGRGPSTKRTTR
Trigger: CCTAGTTGTCCTTTTTGTACTTGGTCCTCTTCCTTCCAATCCTCACTGGCTCAAATCCACAGAGTGACAAAGAACAGAGATGCCCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 90 bp CATCTGCTCCAAGCCCTGCTTCACTCCCCTGTGTGTACCTATCCTTaGAGCCTCAAATTCCCGGCCAATCTTGTTTCATTTATAGTTACT +
Preference number: 1 (lower is better)
Translates to: HLLQALLHSPVCTYP*SLKFPANLVSFIVT
Trigger: AGTAACTATAAATGAAACAAGATTGGCCGGGAATTTGAGGCTGCAAGGATAGGTACACACAGGGGAGTGAAGCAGGGCTTGGAGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp GAGAACAGGTCCGAGAATGACTGGAGATTCTATCTTGAGAGTGTCTaGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTAC +
Preference number: 1 (lower is better)
Translates to: ENRSENDWRFYLESV*HCLSQERWASETYY
Trigger: GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTCAAGATAGAATCTCCAGTCATTCTCGGACCTGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp AGGGTCTGCCTCCTCTATGCAGAAACAACAGGAAGGGATAAGGAGTaGGGCTTGAGTGAAGACAGAAGCAGCAATTCTGTTGAGATACAT +
Preference number: 1 (lower is better)
Translates to: RVCLLYAETTGRDKE*GLSEDRSSNSVEIH
Trigger: ATGTATCTCAACAGAATTGCTGCTTCTGTCTTCACTCAAGCCCCACTCCTTATCCCTTCCTGTTGTTTCTGCATAGAGGAGGCAGACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 90 bp CACTTCCAAAACACAGAAGAGGGAACACTTTCTAAGCTTATCCTATaGGATGGACACCAAAACCCAAGAGATCACAAGGTGGTGGGTGGC +
Preference number: 1 (lower is better)
Translates to: HFQNTEEGTLSKLIL*DGHQNPRDHKVVGG
Trigger: GCCACCCACCACCTTGTGATCTCTTGGGTTTTGGTGTCCATCTCATAGGATAAGCTTAGAAAGTGTTCCCTCTTCTGTGTTTTGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp GCTGTGTCCATGGCCTGTGGAAATATGCCAGCCCAGCAGAACAGCTaGAATCCTACACTATTAATATGGTTATGTTTTCCAAGCAAGTAC +
Preference number: 1 (lower is better)
Translates to: AVSMACGNMPAQQNS*NPTLLIWLCFPSKY
Trigger: GTACTTGCTTGGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGCCATGGACACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
3UTR TCA 90 bp GTACGTCATGCAGTAAACCACGACAGCTACAAATCGGTCTGCTCCTaGGAGGCTACTGCATGGCTTTCCAATTTGTGTGTATTCATAAAT +
Preference number: 1 (lower is better)
Translates to: VRHAVNHDSYKSVCS*EATAWLSNLCVFIN
Trigger: ATTTATGAATACACACAAATTGGAAAGCCATGCAGTAGCCTCTCAGGAGCAGACCGATTTGTAGCTGTCGTGGTTTACTGCATGACGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 90 bp GCAGAGGCCCCAGGTATTTGCATCGCCTCAGGAGAAACTATAATTTaGCAAATAAATGCATTCTTGGCCATTTGTGTCAGTTCACAGAAG +
Preference number: 1 (lower is better)
Translates to: AEAPGICIASGETII*QINAFLAICVSSQK
Trigger: CTTCTGTGAACTGACACAAATGGCCAAGAATGCATTTATTTGTCAAATTATAGTTTCTCCTGAGGCGATGCAAATACCTGGGGCCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 90 bp GGGCGTTGTGAAGTAACAGTGGTATACGGGACATTTATGGTCTTATaGAAAACTAACATATATTCGCAGAGGCCCCAGGTATTTGCATCG +
Preference number: 1 (lower is better)
Translates to: GRCEVTVVYGTFMVL*KTNIYSQRPQVFAS
Trigger: CGATGCAAATACCTGGGGCCTCTGCGAATATATGTTAGTTTTTCATAAGACCATAAATGTCCCGTATACCACTGTTACTTCACAACGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 90 bp AACGGCCAACAAACAGATACTCAGCATCACCAGTCATTACGGAAATaGAAATCAAAATCTCAGCAGGATACCACTTCACACTCATTAGGA +
Preference number: 1 (lower is better)
Translates to: NGQQTDTQHHQSLRK*KSKSQQDTTSHSLG
Trigger: TCCTAATGAGTGTGAAGTGGTATCCTGCTGAGATTTTGATTTGCATTTCCGTAATGACTGGTGATGCTGAGTATCTGTTTGTTGGCCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp GAAGGCCCCCTGATAGAAACTGTATTCAAAAATACCATTCCAAAGTaGAGATCTATGATTTCTCTTCTCATCTCTGTTTGGTGTTGTCCG +
Preference number: 1 (lower is better)
Translates to: EGPLIETVFKNTIPK*RSMISLLISVWCCP
Trigger: CGGACAACACCAAACAGAGATGAGAAGAGAAATCATAGATCTCCACTTTGGAATGGTATTTTTGAATACAGTTTCTATCAGGGGGCCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp TGCACACCCATGTTTACGGCAGCAATATTCACAATAGCTAAAAGGTaGAAGCAACTCAAGTGTCCTCAACAGATGAGTACACAAACAAAA +
Preference number: 1 (lower is better)
Translates to: CTPMFTAAIFTIAKR*KQLKCPQQMSTQTK
Trigger: TTTTGTTTGTGTACTCATCTGTTGAGGACACTTGAGTTGCTTCCACCTTTTAGCTATTGTGAATATTGCTGCCGTAAACATGGGTGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 90 bp GAAAAGCCTCCCAAGAAAGAAAAGCCCAGGGTCATATGGGAATTCTaGCAAACATCTGAAGAATTAAATCAATTCTCCTCAAACTCTTCC +
Preference number: 1 (lower is better)
Translates to: EKPPKKEKPRVIWEF*QTSEELNQFSSNSS
Trigger: GGAAGAGTTTGAGGAGAATTGATTTAATTCTTCAGATGTTTGCCAGAATTCCCATATGACCCTGGGCTTTTCTTTCTTGGGAGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 90 bp ACTGGACAAATTCTTAGAAACACACAGCCTATCAAGATTGAATCATaGAGAAATGGAAAATCTGAACAGACCTATGCTAGTCAAGAGCAT +
Preference number: 1 (lower is better)
Translates to: TGQILRNTQPIKIES*RNGKSEQTYASQEH
Trigger: ATGCTCTTGACTAGCATAGGTCTGTTCAGATTTTCCATTTCTTCATGATTCAATCTTGATAGGCTGTGTGTTTCTAAGAATTTGTCCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CAA 90 bp GAGCCAGCCCAGGACCCCTGTGGCACCAGCAGTGCCTTCTCCTGCTaGCCCCTCCAGCTGGTGCTCTGGGCATCTCTGTTCTTTGTCACT +
Preference number: 2 (lower is better)
Translates to: EPAQDPCGTSSAFSC*PLQLVLWASLFFVT
Trigger: AGTGACAAAGAACAGAGATGCCCAGAGCACCAGCTGGAGGGGCAAGCAGGAGAAGGCACTGCTGGTGCCACAGGGGTCCTGGGCTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTCACTATGAGCCCTaGACAGACAGCAGGATTCAC +
Preference number: 2 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHTHYEP*TDSRIH
Trigger: GTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGT...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR-3UTR GCA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCAGAGCACAGAGACCACTaGCCGTTGTTGGGCTGCGTG +
Preference number: 2 (lower is better)
Translates to: PRHSREKQWQIHVACIGAEHRDH*PLLGCV
Trigger: CACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTC...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCAGGGACTAAAGGGAGGTaGGTGGTGTCCATCACGTGC +
Preference number: 2 (lower is better)
Translates to: PRHSREKQWQIHVACIGAGTKGR*VVSITC
Trigger: GCACGTGATGGACACCACTCACCTCCCTTTAGTCCC...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTGGGACTAAAGGGAGGTaGGTGGTGTCCATCACGTGC +
Preference number: 2 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSGTKGR*VVSITC
Trigger: GCACGTGATGGACACCACTCACCTCCCTTTAGTCCC...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTAGAGCACAGAGACCACTaGCCGTTGTTGGGCTGCGTG +
Preference number: 2 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVEHRDH*PLLGCV
Trigger: CACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTC...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTTCCCTAAGACAAGAATaGCTGTCATTGCCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTSLRQE*LSLPWV
Trigger: AACCCAGGGCAATGACAGCCATTCTTGTCTTAGGGA...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR CAA 90 bp TCTCCTGCTTGCCCCTCCAGCTGGTGCTCTGGGCATCTCTGTTCTTaGTCACTCTGTGGATTTGAGCCAGTGAGGATTGGAAGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: SPACPSSWCSGHLCS*SLCGFEPVRIGRKR
Trigger: CCTCTTCCTTCCAATCCTCACTGGCTCAAATCCACAGAGTGACAAAGAACAGAGATGCCCAGAGCACCAGCTGGAGGGGCAAGCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACAAGAATGGCTGTCATTaGCCTGGGTTCACTTTCTAT +
Preference number: 2 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHKNGCH*PGFTFY
Trigger: ATAGAAAGTGAACCCAGGGCAATGACAGCCATTCTT...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR-3UTR CCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCATGGCTGTCATTGCCCTaGGTTCACTTTCTATTCAAA +
Preference number: 2 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPWLSLP*VHFLFK
Trigger: TTTGAATAGAAAGTGAACCCAGGGCAATGACAGCCA...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR-3UTR GCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCCCAGCAGGGGTGCCCTaGCAGAACCTGTGCTGGATG +
Preference number: 2 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFPAGVP*QNLCWM
Trigger: CATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTGG...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCAGAGGCCCCAGGTATTTaGATCGCCTCAGGAGAAACT +
Preference number: 2 (lower is better)
Translates to: PRHSREKQWQIHVACIGAEAPGI*IASGET
Trigger: AGTTTCTCCTGAGGCGATGCAAATACCTGGGGCCTC...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGCCGACATCATACCCCTaGACTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: SVWHCLSQERWASETYYLPTSYP*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGGGGTATGATGTCGG...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTCATAGAGGGCCCCAATaGCTGGTGCTGGTTAGTCAT +
Preference number: 2 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSHRGPQ*LVLVSH
Trigger: ATGACTAACCAGCACCAGCCATTGGGGCCCTCTATG...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CAA 90 bp CAGCGCAGACTGAGAACAGGTCCGAGAATGACTGGAGATTCTATCTaGAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTG +
Preference number: 2 (lower is better)
Translates to: QRRLRTGPRMTGDSI*RVSGIAFHRSDGQV
Trigger: CACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTCAAGATAGAATCTCCAGTCATTCTCGGACCTGTTCTCAGTCTGCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTGGAGCGATGGGCAAGTaGAACTTACTACCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSGAMGK*NLLPGF
Trigger: AAAGCCAGGTAGTAAGTTTCACTTGCCCATCGCTCC...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCCTGTGGCACCAGCAGTaGCTTCTCCTGCTTGCCCCT +
Preference number: 2 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFLWHQQ*LLLLAP
Trigger: AGGGGCAAGCAGGAGAAGGCACTGCTGGTGCCACAG...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGACCACGTGGCCTGTATTaGGGCAGGTGCCCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRPRGLY*GRCPGE
Trigger: CTCCCCAGGGCACCTGCCCCAATACAGGCCACGTGG...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACACAGAACACTCACTATaGGCCCTGCACAGACAGCAG +
Preference number: 2 (lower is better)
Translates to: ESVWHCLSQERWASETYYTEHSL*ALHRQQ
Trigger: CTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGT...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGTTGAGCTCAAACTCCTaGGACCAGCCTGGGCAACAT +
Preference number: 2 (lower is better)
Translates to: SVWHCLSQERWASETYYLLSSNS*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAGGAGTTTGAGCTCAA...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTAACTCACTATGAGCCCTaGACAGACAGCAGGATTCAC +
Preference number: 2 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVTHYEP*TDSRIH
Trigger: GTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGT...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGTGGCCTGTGGAAATATaGCAGCCCAGCAGAACAGCT +
Preference number: 2 (lower is better)
Translates to: SVWHCLSQERWASETYYLWPVEI*QPSRTA
Trigger: AGCTGTTCTGCTGGGCTGGCATATTTCCACAGGCCA...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACAATGTAAGCCATCCCTaGTTACCTGCCCAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: ESVWHCLSQERWASETYYNVSHP*LPAQLP
Trigger: TGGGAGCTGGGCAGGTAAGCAGGGATGGCTTACATT...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTACCACTGCCCGTTGTTaGGCTGCGTGTGCACACTTC +
Preference number: 2 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVTTARC*AACAHF
Trigger: GAAGTGTGCACACGCAGCCCAACAACGGGCAGTGGT...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCCACTGGAGGGTGAGGTaGGAGGATCACTTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFHWRVR*EDHLSL
Trigger: CAGGCTCAAGTGATCCTCCCACCTCACCCTCCAGTG...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGTGTGTCCATGGCCTGTaGAAATATGCCAGCCCAGCA +
Preference number: 2 (lower is better)
Translates to: SVWHCLSQERWASETYYLCVHGL*KYASPA
Trigger: TGCTGGGCTGGCATATTTCCACAGGCCATGGACACA...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTCTATCCTATGCCTGCTaGGGGGATTTTTCATACTCT +
Preference number: 2 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSLSYAC*GDFSYS
Trigger: AGAGTATGAAAAATCCCCTCAGCAGGCATAGGATAG...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTCCTGTTCCATCTGGGTaGTTCTGTGGAGCTAATAAA +
Preference number: 2 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSPVPSG*FCGANK
Trigger: TTTATTAGCTCCACAGAATCACCCAGATGGAACAGG...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp GCCTGTGGAAATATGCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGCCCGTTGTTGGGCTaGGTGTGCACACTTCATACC +
Preference number: 2 (lower is better)
Translates to: ACGNMPAQQNSWNPTLLICPLLG*VCTLHT
Trigger: GGTATGAAGTGTGCACACGCAGCCCAACAACGGGCA...TATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAAGAGTTTAGAGAGGACTaGTGGGGGTGCATGTGCAGG +
Preference number: 2 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKEFRED*WGCMCR
Trigger: CCTGCACATGCACCCCCAGCAGTCCTCTCTAAACTC...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTGTAAGAGTAGGAGACTaGAGTAGCCCACTTTCAGTA +
Preference number: 2 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSVRVGD*SSPLSV
Trigger: TACTGAAAGTGGGCTACTGCAGTCTCCTACTCTTAC...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAGCTTGCCCCTCCAGCTaGTGCTCTGGGCATCTCTGT +
Preference number: 2 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRACPSS*CSGHLC
Trigger: ACAGAGATGCCCAGAGCACCAGCTGGAGGGGCAAGC...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGACCAGGGGCTGGTGGATaGGGAATAGGGAGTTGGTGC +
Preference number: 2 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRPGAGG*GIGSWC
Trigger: GCACCAACTCCCTATTCCCCATCCACCAGCCCCTGG...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCACAGAACACTCACTATaGGCCCTGCACAGACAGCAG +
Preference number: 2 (lower is better)
Translates to: SILLAVSVTSTKNVELTTTEHSL*ALHRQQ
Trigger: CTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGT...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR-3UTR TCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTGATTTCCTTGGCCTCTaGCTTTCAGTGATGAAAATG +
Preference number: 2 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSDFLGL*LSVMKM
Trigger: CATTTTCATCACTGAAAGTCAGAGGCCAAGGAAATC...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTTGGCCTGTGGAAATATaGCAGCCCAGCAGAACAGCT +
Preference number: 2 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVWPVEI*QPSRTA
Trigger: AGCTGTTCTGCTGGGCTGGCATATTTCCACAGGCCA...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTAATGTAAGCCATCCCTaGTTACCTGCCCAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVNVSHP*LPAQLP
Trigger: TGGGAGCTGGGCAGGTAAGCAGGGATGGCTTACATT...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATAAGCAGTGCCTTCTCCTaGTTGCCCCTCCAGCTGGTG +
Preference number: 2 (lower is better)
Translates to: MIESRDSDICTPMFTAAISSAFS*LPLQLV
Trigger: CACCAGCTGGAGGGGCAAGCAGGAGAAGGCACTGCT...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATAGTGGTCCTGACTGCTTaGGAGGCTGAGGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: MIESRDSDICTPMFTAAIVVLTA*EAEVGG
Trigger: TCCTCCCACCTCAGCCTCCCAAGCAGTCAGGACCAC...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCAAGGTCCGAGAATGACTaGAGATTCTATCTTGAGAGT +
Preference number: 2 (lower is better)
Translates to: PRHSREKQWQIHVACIGARSEND*RFYLES
Trigger: ACTCTCAAGATAGAATCTCCAGTCATTCTCGGACCT...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAACCACGTGGCCTGTATTaGGGCAGGTGCCCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: STDEYTNKMWSIHRISLKPRGLY*GRCPGE
Trigger: CTCCCCAGGGCACCTGCCCCAATACAGGCCACGTGG...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTGCCAACAGGATTCAGTaGGACATTGAAAGGATTACA +
Preference number: 2 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSANRIQ*DIERIT
Trigger: TGTAATCCTTTCAATGTCCCACTGAATCCTGTTGGC...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCAAACCGCATCCTCAGTaGACGCTGGTTATGGTCCAA +
Preference number: 2 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFKPHPQ*TLVMVQ
Trigger: TTGGACCATAACCAGCGTTCACTGAGGATGCGGTTT...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCACTCACTATGAGCCCTaGACAGACAGCAGGATTCAC +
Preference number: 2 (lower is better)
Translates to: SILLAVSVTSTKNVELTTTHYEP*TDSRIH
Trigger: GTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGT...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR-3UTR GCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATACCCTGCCAGAACCTGTaGTGGATGCCTAGGAGCACA +
Preference number: 2 (lower is better)
Translates to: MIESRDSDICTPMFTAAIPCQNL*WMPRST
Trigger: TGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGG...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTATGGCTGTCATTGCCCTaGGTTCACTTTCTATTCAAA +
Preference number: 2 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVWLSLP*VHFLFK
Trigger: TTTGAATAGAAAGTGAACCCAGGGCAATGACAGCCA...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATAGGAACCAATCCCCCGTaGATACAGAGGGCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: MIESRDSDICTPMFTAAIGTNPP*IQRAGC
Trigger: ACAGCCAGCCCTCTGTATCCACGGGGGATTGGTTCC...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAACCCAATGGCTGGTGCTaGTTAGTCATGTATGCAGGT +
Preference number: 2 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKPNGWC*LVMYAG
Trigger: ACCTGCATACATGACTAACCAGCACCAGCCATTGGG...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACAGTGAACGCTGGTTATaGTCCAAGAGCCAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDSERWL*SKSQPR
Trigger: CCTGGGCTGGCTCTTGGACCATAACCAGCGTTCACT...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTGCCTTAAAATATGTTTaGCTCATGATGTTGGCTGTA +
Preference number: 2 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSALKYV*LMMLAV
Trigger: TACAGCCAACATCATGAGTCAAACATATTTTAAGGC...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATAAGGCAGGCTTGCTTCTaGCTTTTCTCAGAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: MIESRDSDICTPMFTAAIRQACF*LFSEGS
Trigger: GCTGCCCTCTGAGAAAAGTCAGAAGCAAGCCTGCCT...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATATCATCTCACAGATGCTaGGGGCGAGAATGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: MIESRDSDICTPMFTAAISSHRC*GREWQQ
Trigger: CTGCTGCCATTCTCGCCCTCAGCATCTGTGAGATGA...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTTCCAAATGCATTCTATaGGGCCATCATTATTCTGAT +
Preference number: 2 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSSKCIL*GHHYSD
Trigger: ATCAGAATAATGATGGCCTCATAGAATGCATTTGGA...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAAGAACCTGTGCTGGATaGCTAGGAGCACAGAGACCA +
Preference number: 2 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRRTCAG*LGAQRP
Trigger: TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCT...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAACCAAAGTTGAGGGTCTaGCTCCTCTATGCAGAAACA +
Preference number: 2 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKPKLRV*LLYAET
Trigger: TGTTTCTGCATAGAGGAGGCAGACCCTCAACTTTGG...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAAGTGCCTTCTCCTGCTTaGCCCTCCAGCTGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: STDEYTNKMWSIHRISLKVPSPA*PSSWCS
Trigger: AGAGCACCAGCTGGAGGGGCAAGCAGGAGAAGGCAC...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAAAGCAGTGCCTTCTCCTaGTTGCCCCTCCAGCTGGTG +
Preference number: 2 (lower is better)
Translates to: STDEYTNKMWSIHRISLKSSAFS*LPLQLV
Trigger: CACCAGCTGGAGGGGCAAGCAGGAGAAGGCACTGCT...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACCATAGAGGGCCCCAATaGCTGGTGCTGGTTAGTCAT +
Preference number: 2 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDHRGPQ*LVLVSH
Trigger: ATGACTAACCAGCACCAGCCATTGGGGCCCTCTATG...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTCACCTGATTGAAAAATaGACAAAGAGCCCAAATAGA +
Preference number: 2 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSHLIEK*TKSPNR
Trigger: TCTATTTGGGCTCTTTGTCCATTTTTCAATCAGGTG...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAGTCACTCTGTGGATTTaGGCCAGTGAGGATTGGAAG +
Preference number: 2 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRVTLWI*ASEDWK
Trigger: CTTCCAATCCTCACTGGCTCAAATCCACAGAGTGAC...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACAAACCGCATCCTCAGTaGACGCTGGTTATGGTCCAA +
Preference number: 2 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDKPHPQ*TLVMVQ
Trigger: TTGGACCATAACCAGCGTTCACTGAGGATGCGGTTT...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATAGAGGCCCCAGGTATTTaGATCGCCTCAGGAGAAACT +
Preference number: 2 (lower is better)
Translates to: MIESRDSDICTPMFTAAIEAPGI*IASGET
Trigger: AGTTTCTCCTGAGGCGATGCAAATACCTGGGGCCTC...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGGAGAGTGTCTGGCATTaGCTTTCACAGGAGCGATGG +
Preference number: 2 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKESVWH*LSQERW
Trigger: CCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAAGTGGTGTCCATCACGTaGACACATCATAATGAAGAG +
Preference number: 2 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKVVSIT*THHNEE
Trigger: CTCTTCATTATGATGTGTGCACGTGATGGACACCAC...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAACAAGAGATCACAAGGTaGTGGGTGGCAGGTGGGGTG +
Preference number: 2 (lower is better)
Translates to: STDEYTNKMWSIHRISLKQEITR*WVAGGV
Trigger: CACCCCACCTGCCACCCACCACCTTGTGATCTCTTG...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAGGAAGGGATAAGGAGTaGGGCTTGAGTGAAGACAGA +
Preference number: 2 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRGRDKE*GLSEDR
Trigger: TCTGTCTTCACTCAAGCCCCACTCCTTATCCCTTCC...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAACTCCTACCGGCTCAGTaGCATTTAGCCCATGGGACG +
Preference number: 2 (lower is better)
Translates to: STDEYTNKMWSIHRISLKLLPAQ*HLAHGT
Trigger: CGTCCCATGGGCTAAATGCCACTGAGCCGGTAGGAG...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCACAGAACACTCACTATaGGCCCTGCACAGACAGCAG +
Preference number: 2 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFTEHSL*ALHRQQ
Trigger: CTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGT...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
3UTR-3UTR TCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCTTTGCTTGGGCTCCTTaGCCCTATTCAAAAATGGAA +
Preference number: 2 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFFAWAP*PYSKME
Trigger: TTCCATTTTTGAATAGGGTCAAGGAGCCCAAGCAAA...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAAAGGCAGGCTTGCTTCTaGCTTTTCTCAGAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: STDEYTNKMWSIHRISLKRQACF*LFSEGS
Trigger: GCTGCCCTCTGAGAAAAGTCAGAAGCAAGCCTGCCT...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAACACAGTCCAGGATTATaGACAGACCAGCCCCCAACC +
Preference number: 2 (lower is better)
Translates to: STDEYTNKMWSIHRISLKHSPGL*TDQPPT
Trigger: GGTTGGGGGCTGGTCTGTGCATAATCCTGGACTGTG...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCCTGGTTAGTCATGTATaGAGGTCCTTCTTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFLVSHV*RSFFFL
Trigger: GAGGAAAAAGAAGGACCTGCATACATGACTAACCAG...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CAA 90 bp CGCAGAGGCCCCAGGTATTTGCATCGCCTCAGGAGAAACTATAATTaGACAAATAAATGCATTCTTGGCCATTTGTGTCAGTTCACAGAA +
Preference number: 2 (lower is better)
Translates to: RRGPRYLHRLRRNYN*TNKCILGHLCQFTE
Trigger: TTCTGTGAACTGACACAAATGGCCAAGAATGCATTTATTTGTCAAATTATAGTTTCTCCTGAGGCGATGCAAATACCTGGGGCCTCTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAAGCTTTCCCCTAAGATaGGGAACAAGACAAGGATGT +
Preference number: 2 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRSFPLR*GTRQGC
Trigger: ACATCCTTGTCTTGTTCCTCATCTTAGGGGAAAGCT...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp AGTGAAACTTACTACCTGGCTTTAGGCTCCTGGGGTCCTGAATTATCTACTTCATACGTTTCTATCCTATaGCTGCTGAGGGGATTTTTC +
Preference number: 2 (lower is better)
Translates to: SETYYLALGSWGPELSTSYVSIL*LLRGFF
Trigger: GAAAAATCCCCTCAGCAGGCATAGGATAGAAACGTA...TGAAGTAGATAATTCAGGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAAAAAGTAGAAATGATTTaGTTGGGCTCCTTGACCCTA +
Preference number: 2 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKKVEMI*LGSLTL
Trigger: TAGGGTCAAGGAGCCCAAGCAAATCATTTCTACTTT...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATACTGTTGCTAATCCCTTaGCTTTGCCATTGGGTAGCA +
Preference number: 2 (lower is better)
Translates to: MIESRDSDICTPMFTAAILLLIP*LCHWVA
Trigger: TGCTACCCAATGGCAAAGCCAAGGGATTAGCAACAG...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCTATTCAACAAAATACTaGCCAACAGGATTCAGTGGG +
Preference number: 2 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFYSTKY*PTGFSG
Trigger: CCCACTGAATCCTGTTGGCCAGTATTTTGTTGAATA...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGACAGAACACTCACTATaGGCCCTGCACAGACAGCAG +
Preference number: 2 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKTEHSL*ALHRQQ
Trigger: CTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGT...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR-3UTR TCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGAGGCTCCTGGGGTCCTaGATTATCTACTTCATTGTA +
Preference number: 2 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKRLLGS*IIYFIV
Trigger: TACAATGAAGTAGATAATTCAGGACCCCAGGAGCCT...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCCTGTCTATTCATAGATaGCATGATTTTGTACACAGC +
Preference number: 2 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFLSIHR*HDFVHS
Trigger: GCTGTGTACAAAATCATGTCATCTATGAATAGACAG...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCATACTCTTTTCAGCATaGACAATAATCTTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFILFSA*TIIFGW
Trigger: CCACCCAAAGATTATTGTGCATGCTGAAAAGAGTAT...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACAGAGACTCAGATATTTaGACACCCATGTTTACGGCA +
Preference number: 2 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDRDSDI*TPMFTA
Trigger: TGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCT...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCCATCTCTGGAGAAAATaGTCTTATCCTCTTAAAGGA +
Preference number: 2 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFHLWRK*SYPLKG
Trigger: TCCTTTAAGAGGATAAGACCATTTTCTCCAGAGATG...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACTCACAGAAGTGGGGCTaGAAAATCCAGAATCTTTTT +
Preference number: 2 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDSQKWG*KIQNLF
Trigger: AAAAAGATTCTGGATTTTTCAGCCCCACTTCTGTGA...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR GCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGACTCACTATGAGCCCTaGACAGACAGCAGGATTCAC +
Preference number: 2 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKTHYEP*TDSRIH
Trigger: GTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGT...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR-3UTR GCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTAAAAAGAAATACCTGTaGTTCAGGGATAATGGAAAC +
Preference number: 2 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVKKKYL*FRDNGN
Trigger: GTTTCCATTATCCCTGAAGCACAGGTATTTCTTTTT...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAAAAGTTTAGACTGCACTaGGCTGTTCCCATCACAGTC +
Preference number: 2 (lower is better)
Translates to: STDEYTNKMWSIHRISLKKFRLH*AVPITV
Trigger: GACTGTGATGGGAACAGCCCAGTGCAGTCTAAACTT...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAATGCACAATAATCTTTaGGTGGTGGGACTGATTTTC +
Preference number: 2 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRMHNNL*VVGLIF
Trigger: GAAAATCAGTCCCACCACCCAAAGATTATTGTGCAT...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATATTAATCTCACAGGAGTaGCATCCCTACTTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: MIESRDSDICTPMFTAAILISQE*HPYFWK
Trigger: CTTCCAAAAGTAGGGATGCCACTCCTGTGAGATTAA...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACCAGCACATGATCTTATaGAGGCCAAAAACTACATTA +
Preference number: 2 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDQHMIL*RPKTTL
Trigger: TAATGTAGTTTTTGGCCTTCATAAGATCATGTGCTG...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGACTGAGAGGAAGAAGTaGAACTGTCTATTCATAGAT +
Preference number: 2 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKTERKK*NCLFID
Trigger: ATCTATGAATAGACAGTTTCACTTCTTCCTCTCAGT...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR TCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAATCTAAGCTTATCCTATaGGATGGACACCAAAACCCA +
Preference number: 2 (lower is better)
Translates to: STDEYTNKMWSIHRISLKSKLIL*DGHQNP
Trigger: TGGGTTTTGGTGTCCATCTCATAGGATAAGCTTAGA...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 72 bp GCCCAGGACCCCTGTGGCACCAGCAGTGCCTTCTCCTaGTTGCCCCTCCAGCTGGTGCTCTGGGCATCTCTG +
Preference number: 3 (lower is better)
Translates to: AQDPCGTSSAFS*LPLQLVLWASL
Trigger: CAGAGATGCCCAGAGCACCAGCTGGAGGGGCAAGCAGGAGAAGGCACTGCTGGTGCCACAGGGGTCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 72 bp CCCCAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATaGCTAGGAGCACAGAGACCACTGCCCGTTGTTGGG +
Preference number: 3 (lower is better)
Translates to: PQQGCPARTCAG*LGAQRPLPVVG
Trigger: CCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR GCA 72 bp CATGCACTGGTGCGTGGCCCCCTGGTGGCGGCTTCATaGCACTACTGCCAAGTGGCAAGAGAGCCCCATGGC +
Preference number: 3 (lower is better)
Translates to: HALVRGPLVAAS*HYCQVAREPHG
Trigger: GCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCATGAAGCCGCCACCAGGGGGCCACGCACCAGTGCATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp CCAACCCCAGCAGGGGTGCCCTGCCAGAACCTGTGCTaGATGCCTAGGAGCACAGAGACCACTGCCCGTTGT +
Preference number: 3 (lower is better)
Translates to: PTPAGVPCQNLC*MPRSTETTARC
Trigger: ACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTGGGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR GCA 72 bp TGTCCCTCGAACGCACCTGCAGGAGGCTGTGACCCATaGAGTGGCAATGCGGCTAGCTGTGTCCATGGCCTG +
Preference number: 3 (lower is better)
Translates to: CPSNAPAGGCDP*SGNAASCVHGL
Trigger: CAGGCCATGGACACAGCTAGCCGCATTGCCACTGCATGGGTCACAGCCTCCTGCAGGTGCGTTCGAGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
3UTR CCA 72 bp GAACACAGCCACATGCACTGGTGCGTGGCCCCCTGGTaGCGGCTTCATGCCACTACTGCCAAGTGGCAAGAG +
Preference number: 3 (lower is better)
Translates to: EHSHMHWCVAPW*RLHATTAKWQE
Trigger: CTCTTGCCACTTGGCAGTAGTGGCATGAAGCCGCCACCAGGGGGCCACGCACCAGTGCATGTGGCTGTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 72 bp ATCTCTCCCCAGCAATGTAAGCCATCCCTGCTTACCTaGCCAGCTCCCACAGCTTGTCCCTCGAACGCACCT +
Preference number: 3 (lower is better)
Translates to: ISPQQCKPSLLT*PAPTACPSNAP
Trigger: AGGTGCGTTCGAGGGACAAGCTGTGGGAGCTGGGCAGGTAAGCAGGGATGGCTTACATTGCTGGGGAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 72 bp GCAATGGCAGATCCACGTGGCCTGTATTGGGGCAGGTaGCCTGGGGAGCAACTCCTTCATCTCACAGATGCT +
Preference number: 3 (lower is better)
Translates to: AMADPRGLYWGR*PGEQLLHLTDA
Trigger: AGCATCTGTGAGATGAAGGAGTTGCTCCCCAGGGCACCTGCCCCAATACAGGCCACGTGGATCTGCCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp CAAAAAGTTTGGAACACAGCCACATGCACTGGTGCGTaGCCCCCTGGTGGCGGCTTCATGCCACTACTGCCA +
Preference number: 3 (lower is better)
Translates to: QKVWNTATCTGA*PPGGGFMPLLP
Trigger: TGGCAGTAGTGGCATGAAGCCGCCACCAGGGGGCCACGCACCAGTGCATGTGGCTGTGTTCCAAACTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACCAAGAATGGCTGTCATaGCCCTGGGTTCACTTTCTA +
Preference number: 3 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHQEWLS*PWVHFL
Trigger: TAGAAAGTGAACCCAGGGCAATGACAGCCATTCTTG...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR-3UTR CAA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCCCAGCTCCCACAGCTaGTCCCTCGAACGCACCTGC +
Preference number: 3 (lower is better)
Translates to: ESVWHCLSQERWASETYYPSSHS*SLERTC
Trigger: GCAGGTGCGTTCGAGGGACAAGCTGTGGGAGCTGGG...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp TGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTaGGCTGCGTGTGCACACTTCATACCCCGATCCATA +
Preference number: 3 (lower is better)
Translates to: WMPRSTETTARC*AACAHFIPRSI
Trigger: TATGGATCGGGGTATGAAGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR CCA 72 bp TGCAGTGGCAATGCGGCTAGCTGTGTCCATGGCCTGTaGAAATATGCCAGCCCAGCAGAACAGCTGGAATCC +
Preference number: 3 (lower is better)
Translates to: CSGNAASCVHGL*KYASPAEQLES
Trigger: GGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGCCATGGACACAGCTAGCCGCATTGCCACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
3UTR CCA 72 bp AGGGTGGATGCTGGTGTCAGCCATAGAGGGCCCCAATaGCTGGTGCTGGTTAGTCATGTATGCAGGTCCTTC +
Preference number: 3 (lower is better)
Translates to: RVDAGVSHRGPQ*LVLVSHVCRSF
Trigger: GAAGGACCTGCATACATGACTAACCAGCACCAGCCATTGGGGCCCTCTATGGCTGACACCAGCATCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp TATTGTCCAAAAAGTTTGGAACACAGCCACATGCACTaGTGCGTGGCCCCCTGGTGGCGGCTTCATGCCACT +
Preference number: 3 (lower is better)
Translates to: YCPKSLEHSHMH*CVAPWWRLHAT
Trigger: AGTGGCATGAAGCCGCCACCAGGGGGCCACGCACCAGTGCATGTGGCTGTGTTCCAAACTTTTTGGACAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTTCAAAGAGGACTCATTaGGGCACAGCCAATGTAGTA +
Preference number: 3 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTSKRTH*GTANVV
Trigger: TACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGA...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR-3UTR CAA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTAGAGGCCCCAGGTATTaGCATCGCCTCAGGAGAAAC +
Preference number: 3 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSRGPRY*HRLRRN
Trigger: GTTTCTCCTGAGGCGATGCAAATACCTGGGGCCTCT...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp CGAGGAGTCTCCACCCACCTCACAGAACACTCACTATaGGCCCTGCACAGACAGCAGGATTCACAATCTCCA +
Preference number: 3 (lower is better)
Translates to: RGVSTHLTEHSL*ALHRQQDSQSP
Trigger: TGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGAGGTGGGTGGAGACTCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR TCA 72 bp TGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTaGAACTTACTACCTGGCTTTAGGCTCCTGGGGTCC +
Preference number: 3 (lower is better)
Translates to: CLALPFTGAMGK*NLLPGFRLLGS
Trigger: GGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp AGTTGTAACTGGGTGTCAAGAGACACCAGCCCTGAGTaGGCAGCGCAGACTGAGAACAGGTCCGAGAATGAC +
Preference number: 3 (lower is better)
Translates to: SCNWVSRDTSPE*AAQTENRSEND
Trigger: GTCATTCTCGGACCTGTTCTCAGTCTGCGCTGCTCACTCAGGGCTGGTGTCTCTTGACACCCAGTTACAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp CTGGTGTCAGCCATAGAGGGCCCCAATGGCTGGTGCTaGTTAGTCATGTATGCAGGTCCTTCTTTTTCCTCC +
Preference number: 3 (lower is better)
Translates to: LVSAIEGPNGWC*LVMYAGPSFSS
Trigger: GGAGGAAAAAGAAGGACCTGCATACATGACTAACCAGCACCAGCCATTGGGGCCCTCTATGGCTGACACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp AGAGCATTTCAAAGAAACCGCATCCTCAGTGAACGCTaGTTATGGTCCAAGAGCCAGCCCAGGACCCCTGTG +
Preference number: 3 (lower is better)
Translates to: RAFQRNRILSER*LWSKSQPRTPV
Trigger: CACAGGGGTCCTGGGCTGGCTCTTGGACCATAACCAGCGTTCACTGAGGATGCGGTTTCTTTGAAATGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCATTAAGAAGCATATTATaGGCCGTTAGTGTCACGTCA +
Preference number: 3 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPLRSIL*AVSVTS
Trigger: TGACGTGACACTAACGGCCAATAATATGCTTCTTAA...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR-3UTR CAA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCACCTGTTGCTAATCCCTaGGCTTTGCCATTGGGTAGC +
Preference number: 3 (lower is better)
Translates to: PRHSREKQWQIHVACIGAPVANP*ALPLGS
Trigger: GCTACCCAATGGCAAAGCCAAGGGATTAGCAACAGG...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 72 bp ATGCTGGTGTCAGCCATAGAGGGCCCCAATGGCTGGTaGTGGTTAGTCATGTATGCAGGTCCTTCTTTTTCC +
Preference number: 3 (lower is better)
Translates to: MLVSAIEGPNGW*WLVMYAGPSFS
Trigger: GGAAAAAGAAGGACCTGCATACATGACTAACCAGCACCAGCCATTGGGGCCCTCTATGGCTGACACCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp TGGATGCTGGTGTCAGCCATAGAGGGCCCCAATGGCTaGTGCTGGTTAGTCATGTATGCAGGTCCTTCTTTT +
Preference number: 3 (lower is better)
Translates to: WMLVSAIEGPNG*CWLVMYAGPSF
Trigger: AAAAGAAGGACCTGCATACATGACTAACCAGCACCAGCCATTGGGGCCCTCTATGGCTGACACCAGCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp AGCAGCAATTCTGTTGAGATACATATGAGTGCAGGGTaGATGCTGGTGTCAGCCATAGAGGGCCCCAATGGC +
Preference number: 3 (lower is better)
Translates to: SSNSVEIHMSAG*MLVSAIEGPNG
Trigger: GCCATTGGGGCCCTCTATGGCTGACACCAGCATCCACCCTGCACTCATATGTATCTCAACAGAATTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCGACCACTGCCCGTTGTaGGGCTGCGTGTGCACACTT +
Preference number: 3 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFDHCPL*GCVCTL
Trigger: AAGTGTGCACACGCAGCCCAACAACGGGCAGTGGTC...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACGCTGAGGCAGGTGGATaGCTTGAGCTCAAACTCCTG +
Preference number: 3 (lower is better)
Translates to: ESVWHCLSQERWASETYYAEAGG*LELKLL
Trigger: CAGGAGTTTGAGCTCAAGCAATCCACCTGCCTCAGC...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGATCCACGTGGCCTGTATaGGGGCAGGTGCCCTGGGGA +
Preference number: 3 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRSTWPV*GQVPWG
Trigger: TCCCCAGGGCACCTGCCCCAATACAGGCCACGTGGA...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp AGTGAAACTTACTACCTGGCTTTAGGCTCCTGGGGTCCTGAATTATCTACTTCAAGAGACCACTGCCCGTaGTTGGGCTGCGTGTGCACA +
Preference number: 3 (lower is better)
Translates to: SETYYLALGSWGPELSTSRDHCP*LGCVCT
Trigger: TGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCT...TGAAGTAGATAATTCAGGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCAAAGGAGACGGCCACATaGTTGTGTGACGATGCTTAT +
Preference number: 3 (lower is better)
Translates to: PRHSREKQWQIHVACIGAKETAT*LCDDAY
Trigger: ATAAGCATCGTCACACAACAATGTGGCCGTCTCCTT...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTATGGGGAATAGGGAGTaGGTGCTTAATGGGTACAGA +
Preference number: 3 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSMGNRE*VLNGYR
Trigger: TCTGTACCCATTAAGCACCAACTCCCTATTCCCCAT...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 72 bp ACGCACACACAGTGCATACAGAGAGCCTGTACGTCATaGAGTAAACCACGACAGCTACAAATCGGTCTGCTC +
Preference number: 3 (lower is better)
Translates to: THTQCIQRACTS*SKPRQLQIGLL
Trigger: GAGCAGACCGATTTGTAGCTGTCGTGGTTTACTGCATGACGTACAGGCTCTCTGTATGCACTGTGTGTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 72 bp CAGGTGCCACGTTACCACCTAGAACACACTGTCTCATaGTGTGAGCCAGGGCTTTTTAGGCACACAATGATG +
Preference number: 3 (lower is better)
Translates to: QVPRYHLEHTVS*CEPGLFRHTMM
Trigger: CATCATTGTGTGCCTAAAAAGCCCTGGCTCACAGCATGAGACAGTGTGTTCTAGGTGGTAACGTGGCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 72 bp GAAAAGCCAACAATCTTTACCATCTGCTCCAAGCCCTaGTTCACTCCCCTGTGTGTACCTATCCTTGCAGCC +
Preference number: 3 (lower is better)
Translates to: EKPTIFTICSKP*FTPLCVPILAA
Trigger: GGCTGCAAGGATAGGTACACACAGGGGAGTGAAGCAGGGCTTGGAGCAGATGGTAAAGATTGTTGGCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp TTCATGCCACTACTGCCAAGTGGCAAGAGAGCCCCATaGCTGGAAAAGCCAACAATCTTTACCATCTGCTCC +
Preference number: 3 (lower is better)
Translates to: FMPLLPSGKRAP*LEKPTIFTICS
Trigger: GGAGCAGATGGTAAAGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAAGAGACCACTGCCCGTaGTTGGGCTGCGTGTGCACA +
Preference number: 3 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRRDHCP*LGCVCT
Trigger: TGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCT...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAAAGAGGCCCCAGGTATTaGCATCGCCTCAGGAGAAAC +
Preference number: 3 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKRGPRY*HRLRRN
Trigger: GTTTCTCCTGAGGCGATGCAAATACCTGGGGCCTCT...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp AAGAACAAGAGCATTTCAAAGAAACCGCATCCTCAGTaGACGCTGGTTATGGTCCAAGAGCCAGCCCAGGAC +
Preference number: 3 (lower is better)
Translates to: KNKSISKKPHPQ*TLVMVQEPAQD
Trigger: GTCCTGGGCTGGCTCTTGGACCATAACCAGCGTTCACTGAGGATGCGGTTTCTTTGAAATGCTCTTGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp CATGGTGAAACCCCATCTCTCACAGAACACTCACTATaGGCCCTGCACAGACAGCAGGATTCACAATCTCCA +
Preference number: 3 (lower is better)
Translates to: HGETPSLTEHSL*ALHRQQDSQSP
Trigger: TGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGAGAGATGGGGTTTCACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519274.1
3UTR GCA 72 bp TTGCTGTGTACAGCCCTGTACAGTACGCACACACAGTaGATACAGAGAGCCTGTACGTCATGCAGTAAACCA +
Preference number: 3 (lower is better)
Translates to: LLCTALYSTHTQ*IQRACTSCSKP
Trigger: TGGTTTACTGCATGACGTACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 72 bp AGAGGGCCCCAATGGCTGGTGCTGGTTAGTCATGTATaGAGGTCCTTCTTTTTCCTCCTACCTGTTGCTAAT +
Preference number: 3 (lower is better)
Translates to: RGPQWLVLVSHV*RSFFFLLPVAN
Trigger: ATTAGCAACAGGTAGGAGGAAAAAGAAGGACCTGCATACATGACTAACCAGCACCAGCCATTGGGGCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 72 bp CAAGCCCTGCTTCACTCCCCTGTGTGTACCTATCCTTaGAGCCTCAAATTCCCGGCCAATCTTGTTTCATTT +
Preference number: 3 (lower is better)
Translates to: QALLHSPVCTYP*SLKFPANLVSF
Trigger: AAATGAAACAAGATTGGCCGGGAATTTGAGGCTGCAAGGATAGGTACACACAGGGGAGTGAAGCAGGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTACAGCCAAAATCATCTaGAAAGGGAACCAAGTAGGA +
Preference number: 3 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSTAKII*KGNQVG
Trigger: TCCTACTTGGTTCCCTTTCAAGATGATTTTGGCTGT...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp GCAGTAAACCACGACAGCTACAAATCGGTCTGCTCCTaGGAGGCTACTGCATGGCTTTCCAATTTGTGTGTA +
Preference number: 3 (lower is better)
Translates to: AVNHDSYKSVCS*EATAWLSNLCV
Trigger: TACACACAAATTGGAAAGCCATGCAGTAGCCTCTCAGGAGCAGACCGATTTGTAGCTGTCGTGGTTTACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp TCCGAGAATGACTGGAGATTCTATCTTGAGAGTGTCTaGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAA +
Preference number: 3 (lower is better)
Translates to: SENDWRFYLESV*HCLSQERWASE
Trigger: TTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTCAAGATAGAATCTCCAGTCATTCTCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTGTAGTTTCAACACAATaGAAGTTTAGACTGCACTGG +
Preference number: 3 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSVVSTQ*KFRLHW
Trigger: CCAGTGCAGTCTAAACTTCAATTGTGTTGAAACTAC...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCAGTAGTTTCAACACAATaGAAGTTTAGACTGCACTGG +
Preference number: 3 (lower is better)
Translates to: PRHSREKQWQIHVACIGAVVSTQ*KFRLHW
Trigger: CCAGTGCAGTCTAAACTTCAATTGTGTTGAAACTAC...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACAAAAGTAGAAATGATTaGCTTGGGCTCCTTGACCCT +
Preference number: 3 (lower is better)
Translates to: ESVWHCLSQERWASETYYKSRND*LGLLDP
Trigger: AGGGTCAAGGAGCCCAAGCAAATCATTTCTACTTTT...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTGAGACGGCCACATTGTaGTGTGACGATGCTTATCAT +
Preference number: 3 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVETATL*CDDAYH
Trigger: ATGATAAGCATCGTCACACAACAATGTGGCCGTCTC...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTAAGGAGACGGCCACATaGTTGTGTGACGATGCTTAT +
Preference number: 3 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVKETAT*LCDDAY
Trigger: ATAAGCATCGTCACACAACAATGTGGCCGTCTCCTT...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp GACAACCAGACAGAAGATCAGTCGCAAGACAGAACTTaGACAGCATCATACCAGCTGGACCTAACAGACACA +
Preference number: 3 (lower is better)
Translates to: DNQTEDQSQDRT*TASYQLDLTDT
Trigger: TGTGTCTGTTAGGTCCAGCTGGTATGATGCTGTTCAAGTTCTGTCTTGCGACTGATCTTCTGTCTGGTTGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCATTTGCTTGGGCTCCTaGACCCTATTCAAAAATGGA +
Preference number: 3 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFICLGS*TLFKNG
Trigger: TCCATTTTTGAATAGGGTCAAGGAGCCCAAGCAAAT...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp ATAGTTAATGGTGAGACTGAAAGCTTTCCCCTAAGATaGGGAACAAGACAAGGATGTTCACTCTCGCACTGC +
Preference number: 3 (lower is better)
Translates to: IVNGETESFPLR*GTRQGCSLSHC
Trigger: GCAGTGCGAGAGTGAACATCCTTGTCTTGTTCCTCATCTTAGGGGAAAGCTTTCAGTCTCACCATTAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 72 bp GAAGAAATGGATAGTTCTACAGTAAGAGTAGGAGACTaGAGTAGCCCACTTTCAGTAACGGATAGGACAACC +
Preference number: 3 (lower is better)
Translates to: EEMDSSTVRVGD*SSPLSVTDRTT
Trigger: GGTTGTCCTATCCGTTACTGAAAGTGGGCTACTGCAGTCTCCTACTCTTACTGTAGAACTATCCATTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp GCCTGTGGAAATATGCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATTAAGAAGCATATTATaGGCCGTTAGTGTCACGTCA +
Preference number: 3 (lower is better)
Translates to: ACGNMPAQQNSWNPTLLILRSIL*AVSVTS
Trigger: TGACGTGACACTAACGGCCAATAATATGCTTCTTAA...TATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATATTTTCCTCCTACCTGTaGCTAATCCCTTGGCTTTGC +
Preference number: 3 (lower is better)
Translates to: MIESRDSDICTPMFTAAIFSSYL*LIPWLC
Trigger: GCAAAGCCAAGGGATTAGCAACAGGTAGGAGGAAAA...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp AACACAGAAGAGGGAACACTTTCTAAGCTTATCCTATaGGATGGACACCAAAACCCAAGAGATCACAAGGTG +
Preference number: 3 (lower is better)
Translates to: NTEEGTLSKLIL*DGHQNPRDHKV
Trigger: CACCTTGTGATCTCTTGGGTTTTGGTGTCCATCTCATAGGATAAGCTTAGAAAGTGTTCCCTCTTCTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp AAAGTAGTTTCAACACAATTGAAGTTTAGACTGCACTaGGCTGTTCCCATCACAGTCCAGGATTATGCACAG +
Preference number: 3 (lower is better)
Translates to: KVVSTQLKFRLH*AVPITVQDYAQ
Trigger: CTGTGCATAATCCTGGACTGTGATGGGAACAGCCCAGTGCAGTCTAAACTTCAATTGTGTTGAAACTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
3UTR CCA 72 bp ACACTCATTAGGATGGCAATTATTAAAAACAGGTGTTaGCAAGGATGTGGCAAAACTGGAACCTTCAGTGGG +
Preference number: 3 (lower is better)
Translates to: TLIRMAIIKNRC*QGCGKTGTFSG
Trigger: CCCACTGAAGGTTCCAGTTTTGCCACATCCTTGCCAACACCTGTTTTTAATAATTGCCATCCTAATGAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACGCAAAAACGAGACAGTaGAGGTGTCTCTTCTATTTG +
Preference number: 3 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDAKTRQ*RCLFYL
Trigger: CAAATAGAAGAGACACCTCAACTGTCTCGTTTTTGC...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp CAAATAAACCCTTGCACATATGGGTCAAATGATTTTTaGTGGTGCCAAGACCATTCAAGGGAGAAAGGACAG +
Preference number: 3 (lower is better)
Translates to: QINPCTYGSNDF*WCQDHSREKGQ
Trigger: CTGTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATGTGCAAGGGTTTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAAGTAGAAATGATTTGCTaGGGCTCCTTGACCCTATTC +
Preference number: 3 (lower is better)
Translates to: STDEYTNKMWSIHRISLKVEMIC*GSLTLF
Trigger: GAATAGGGTCAAGGAGCCCAAGCAAATCATTTCTAC...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATACCCAAGAATGCAAGGTaGGTTCAAGATATAGAAATC +
Preference number: 3 (lower is better)
Translates to: MIESRDSDICTPMFTAAIPKNAR*VQDIEI
Trigger: GATTTCTATATCTTGAACCAACCTTGCATTCTTGGG...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR-3UTR CAA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATACTTGTAAAGTTGAACTaGTGGATACGTGGTAGAGAA +
Preference number: 3 (lower is better)
Translates to: MIESRDSDICTPMFTAAILVKLN*WIRGRE
Trigger: TTCTCTACCACGTATCCACAAGTTCAACTTTACAAG...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp GAAGTAACAGTGGTATACGGGACATTTATGGTCTTATaGAAAACTAACATATATTCGCAGAGGCCCCAGGTA +
Preference number: 3 (lower is better)
Translates to: EVTVVYGTFMVL*KTNIYSQRPQV
Trigger: TACCTGGGGCCTCTGCGAATATATGTTAGTTTTTCATAAGACCATAAATGTCCCGTATACCACTGTTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR GCA 72 bp AAATGGTGCAGCCACCGTGTAAAACACTTATGGCAGTaGCCTAAGAAATTAAACATAGGATTGCCATATGAT +
Preference number: 3 (lower is better)
Translates to: KWCSHRVKHLWQ*PKKLNIGLPYD
Trigger: ATCATATGGCAATCCTATGTTTAATTTCTTAGGGCACTGCCATAAGTGTTTTACACGGTGGCTGCACCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp AATGTAAAATGGTGCAGCCACCGTGTAAAACACTTATaGCAGTGCCCTAAGAAATTAAACATAGGATTGCCA +
Preference number: 3 (lower is better)
Translates to: NVKWCSHRVKHL*QCPKKLNIGLP
Trigger: TGGCAATCCTATGTTTAATTTCTTAGGGCACTGCCATAAGTGTTTTACACGGTGGCTGCACCATTTTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp GAAAAGCCTCCCAAGAAAGAAAAGCCCAGGGTCATATaGGAATTCTGGCAAACATCTGAAGAATTAAATCAA +
Preference number: 3 (lower is better)
Translates to: EKPPKKEKPRVI*EFWQTSEELNQ
Trigger: TTGATTTAATTCTTCAGATGTTTGCCAGAATTCCCATATGACCCTGGGCTTTTCTTTCTTGGGAGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp CAATATGTTGTGATGAAAAAGCCTGTTCCATCTGGGTaGTTCTGTGGAGCTAATAAAAGCCAAGTTTCCAAA +
Preference number: 3 (lower is better)
Translates to: QYVVMKKPVPSG*FCGANKSQVSK
Trigger: TTTGGAAACTTGGCTTTTATTAGCTCCACAGAATCACCCAGATGGAACAGGCTTTTTCATCACAACATATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp AAAGCCCAGGGTCATATGGGAATTCTGGCAAACATCTaGAGAATTAAATCAATTCTCCTCAAACTCTTCCAA +
Preference number: 3 (lower is better)
Translates to: KAQGHMGILANI*RIKSILLKLFQ
Trigger: TTGGAAGAGTTTGAGGAGAATTGATTTAATTCTTCAGATGTTTGCCAGAATTCCCATATGACCCTGGGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp AATACCCTGTCTCACCACTTCTGTTTAACACAGTACTaGAGTCTTAGAGCAGTTAGGCAAGAAAAAGAAATA +
Preference number: 3 (lower is better)
Translates to: NTLSHHFCLTQY*SLRAVRQEKEI
Trigger: TATTTCTTTTTCTTGCCTAACTGCTCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp CTGTATTCAAAAATACCATTCCAAAGTGGAGATCTATaGTTTCTCTTCTCATCTCTGTTTGGTGTTGTCCGA +
Preference number: 3 (lower is better)
Translates to: LYSKIPFQSGDL*FLFSSLFGVVR
Trigger: TCGGACAACACCAAACAGAGATGAGAAGAGAAATCATAGATCTCCACTTTGGAATGGTATTTTTGAATACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp TGCCCTAAGAAATTAAACATAGGATTGCCATATGATTaGAAGCAGAGACTCAGATATTTGCACACCCATGTT +
Preference number: 3 (lower is better)
Translates to: CPKKLNIGLPYD*KQRLRYLHTHV
Trigger: AACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCATATGGCAATCCTATGTTTAATTTCTTAGGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp CAAGTGTCCTCAACAGATGAGTACACAAACAAAATGTaGTCCATCCATAGAATCAGCCTTAAAAAGAAATCT +
Preference number: 3 (lower is better)
Translates to: QVSSTDEYTNKM*SIHRISLKKKS
Trigger: AGATTTCTTTTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGAGGACACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CCA 72 bp AAGGATTACACATCATGGCCAAGTAAGATTTACAGCTaGTATGCAAAGATGTTTCAACATGCTCAAGTCAAT +
Preference number: 3 (lower is better)
Translates to: KDYTSWPSKIYS*YAKMFQHAQVN
Trigger: ATTGACTTGAGCATGTTGAAACATCTTTGCATACCAGCTGTAAATCTTACTTGGCCATGATGTGTAATCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR TCA 72 bp AAGGGTGAATACCCAGAACATATAAAAACACACACCTaGTTGAAAAATGGACAAAGAGCCCAAATAGACATT +
Preference number: 3 (lower is better)
Translates to: KGEYPEHIKTHT*LKNGQRAQIDI
Trigger: AATGTCTATTTGGGCTCTTTGTCCATTTTTCAATCAGGTGTGTGTTTTTATATGTTCTGGGTATTCACCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCACAGGGTCGGCCGCCGTaGAGGGGTGTCCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPQGRPP*RGVLSP
Trigger: AGGACTCAGGACACCCCTGCACGGCGGCCGACCCTG...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTCAGGGTCGGCCGCCGTaGAGGGGTGTCCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTQGRPP*RGVLSP
Trigger: AGGACTCAGGACACCCCTGCACGGCGGCCGACCCTG...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCCAGGGTCGGCCGCCGTaGAGGGGTGTCCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAAQGRPP*RGVLSP
Trigger: AGGACTCAGGACACCCCTGCACGGCGGCCGACCCTG...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACGAGCACAGAGACCACTaGCCGTTGTTGGGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHEHRDH*PLLGCV
Trigger: CACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTC...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTCCAGCAGGGGTGCCCTaGCAGAACCTGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTPAGVP*QNLCWM
Trigger: CATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTGG...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTCAACCCCAGCAGGGGTaGCCTGCCAGAACCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTQPQQG*PARTCA
Trigger: AGCACAGGTTCTGGCAGGGCACCCCTGCTGGGGTTG...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCAGTGGTCCTGACTGCTTaGGAGGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPVVLTA*EAEVGG
Trigger: TCCTCCCACCTCAGCCTCCCAAGCAGTCAGGACCAC...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCAGCTTGCCCCTCCAGCTaGTGCTCTGGGCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPACPSS*CSGHLC
Trigger: ACAGAGATGCCCAGAGCACCAGCTGGAGGGGCAAGC...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACACATGCACTGGTGCGTaGCCCCCTGGTGGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHTCTGA*PPGGGF
Trigger: GAAGCCGCCACCAGGGGGCCACGCACCAGTGCATGT...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCCGGCGCGGATCCGCGTaGCAATGTTGCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAARRGSA*QCCCLV
Trigger: GACCAGGCAGCAACATTGCCACGCGGATCCGCGCCG...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352684.2
CDS-3UTR GCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACCCAGCAGGGGTGCCCTaGCAGAACCTGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHPAGVP*QNLCWM
Trigger: CATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTGG...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCGCGTGGCAATGTTGCTaGCTGGTCCTGTCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAAAWQCC*LVLSPA
Trigger: TGCGGGCGACAGGACCAGGCAGCAACATTGCCACGC...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352684.2
CDS-3UTR GCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACTCCGCGTGGCAATGTTaGTGCCTGGTCCTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHSAWQC*CLVLSP
Trigger: GGGCGACAGGACCAGGCAGCAACATTGCCACGCGGA...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352684.2
CDS-3UTR CCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCACACTGGAGGGTGAGGTaGGAGGATCACTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPHWRVR*EDHLSL
Trigger: CAGGCTCAAGTGATCCTCCCACCTCACCCTCCAGTG...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCACAAGAGATCACAAGGTaGTGGGTGGCAGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPQEITR*WVAGGV
Trigger: CACCCCACCTGCCACCCACCACCTTGTGATCTCTTG...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCAAAGAGGTCGATGAAGTaGTGCGGAGACACAGGCGTG +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPKRSMK*CGDTGV
Trigger: CACGCCTGTGTCTCCGCAGCACTTCATCGACCTCTT...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACTGCCCGTTGTTGGGCTaGGTGTGCACACTTCATACC +
Preference number: 4 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHCPLLG*VCTLHT
Trigger: GGTATGAAGTGTGCACACGCAGCCCAACAACGGGCA...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACCACAGTCCAGGATTATaGACAGACCAGCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHHSPGL*TDQPPT
Trigger: GGTTGGGGGCTGGTCTGTGCATAATCCTGGACTGTG...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCACACAGTCCAGGATTATaGACAGACCAGCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPHSPGL*TDQPPT
Trigger: GGTTGGGGGCTGGTCTGTGCATAATCCTGGACTGTG...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACGTGCCTTCTCCTGCTTaGCCCTCCAGCTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHVPSPA*PSSWCS
Trigger: AGAGCACCAGCTGGAGGGGCAAGCAGGAGAAGGCAC...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTGGAACCAATCCCCCGTaGATACAGAGGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTGTNPP*IQRAGC
Trigger: ACAGCCAGCCCTCTGTATCCACGGGGGATTGGTTCC...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCATTTAGAGAGGACTGCTaGGGGTGCATGTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPFREDC*GCMCRC
Trigger: GCACCTGCACATGCACCCCCAGCAGTCCTCTCTAAA...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACAGTGAACGCTGGTTATaGTCCAAGAGCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHSERWL*SKSQPR
Trigger: CCTGGGCTGGCTCTTGGACCATAACCAGCGTTCACT...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACAGAACACTCACTATaGGCCCTGCACAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHTEHSL*ALHRQQ
Trigger: CTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGT...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTAGGCAGGCTTGCTTCTaGCTTTTCTCAGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTRQACF*LFSEGS
Trigger: GCTGCCCTCTGAGAAAAGTCAGAAGCAAGCCTGCCT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTTCATCTCACAGATGCTaGGGGCGAGAATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTSSHRC*GREWQQ
Trigger: CTGCTGCCATTCTCGCCCTCAGCATCTGTGAGATGA...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTACAGGGTCGGCCGCCGTaGAGGGGTGTCCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVQGRPP*RGVLSP
Trigger: AGGACTCAGGACACCCCTGCACGGCGGCCGACCCTG...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTAGGTCGATGAAGTGCTaGGGAGACACAGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTRSMKC*GDTGVK
Trigger: CTTCACGCCTGTGTCTCCGCAGCACTTCATCGACCT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCAAGAACCTGTGCTGGATaGCTAGGAGCACAGAGACCA +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPRTCAG*LGAQRP
Trigger: TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCT...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTAACGTGGGGGTCACCTaGCCTAAGGTGATGATGTCC +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTNVGVT*PKVMMS
Trigger: GGACATCATCACCTTAGGCCAGGTGACCCCCACGTT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACACCACTGCCCGTTGTTaGGCTGCGTGTGCACACTTC +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHTTARC*AACAHF
Trigger: GAAGTGTGCACACGCAGCCCAACAACGGGCAGTGGT...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACCAAGAGATCACAAGGTaGTGGGTGGCAGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHQEITR*WVAGGV
Trigger: CACCCCACCTGCCACCCACCACCTTGTGATCTCTTG...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTACAGAACACTCACTATaGGCCCTGCACAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTTEHSL*ALHRQQ
Trigger: CTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACAAGAGGTCGATGAAGTaGTGCGGAGACACAGGCGTG +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHKRSMK*CGDTGV
Trigger: CACGCCTGTGTCTCCGCAGCACTTCATCGACCTCTT...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTTTGTTGGGCTGCGTGTaGACACTTCATACCCCGATC +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTLLGCV*TLHTPI
Trigger: GATCGGGGTATGAAGTGTGCACACGCAGCCCAACAA...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTAGAACCTGTGCTGGATaGCTAGGAGCACAGAGACCA +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTRTCAG*LGAQRP
Trigger: TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTACCACGTGGCCTGTATTaGGGCAGGTGCCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVPRGLY*GRCPGE
Trigger: CTCCCCAGGGCACCTGCCCCAATACAGGCCACGTGG...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACACAGAACACTCACTATaGGCCCTGCACAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHTEHSL*ALHRQQ
Trigger: CTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGT...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCTTGAGCTCAAACTCCTaGGACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAALSSNS*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAGGAGTTTGAGCTCAA...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
CDS-3UTR GCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTGGTCTGCCTCCTCTATaGAGAAACAACAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTGLPPL*RNNRKG
Trigger: TCCCTTCCTGTTGTTTCTGCATAGAGGAGGCAGACC...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTTGGAACACAGCCACATaGACTGGTGCGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSWNTAT*TGAWPP
Trigger: AGGGGGCCACGCACCAGTGCATGTGGCTGTGTTCCA...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCAGTACTGCTCCTTCGCTaGGTAATGTTTCTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPVLLLR*VMFLKC
Trigger: GCACTTCAGAAACATTACCCAGCGAAGGAGCAGTAC...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACGAGGGCCCCAATGGCTaGTGCTGGTTAGTCATGTAT +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHEGPNG*CWLVMY
Trigger: ATACATGACTAACCAGCACCAGCCATTGGGGCCCTC...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCACTATCCTATGCCTGCTaGGGGGATTTTTCATACTCT +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPLSYAC*GDFSYS
Trigger: AGAGTATGAAAAATCCCCTCAGCAGGCATAGGATAG...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCACCTGTTCCATCTGGGTaGTTCTGTGGAGCTAATAAA +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPPVPSG*FCGANK
Trigger: TTTATTAGCTCCACAGAATCACCCAGATGGAACAGG...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACGGCAGAGGCTACACCTaGGCAGCTCCTACCGGCTCA +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYGRGYT*AAPTGS
Trigger: TGAGCCGGTAGGAGCTGCTCAGGTGTAGCCTCTGCC...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACGTCACTCTGTGGATTTaGGCCAGTGAGGATTGGAAG +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHVTLWI*ASEDWK
Trigger: CTTCCAATCCTCACTGGCTCAAATCCACAGAGTGAC...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACTCCTGTAGCTGTTGTTaGCAGGCGAGAATAGTTTCT +
Preference number: 4 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHSCSCC*QARIVS
Trigger: AGAAACTATTCTCGCCTGGCAACAACAGCTACAGGA...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACTCCAAAAGAGAATGCTaGAGTGCCGACAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHSKREC*SADRNA
Trigger: TGCATTTCTGTCGGCACTGCAGCATTCTCTTTTGGA...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCACCTTCCAAAAGAGAATaGTGCAGTGCCGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPPSKRE*CSADRN
Trigger: ATTTCTGTCGGCACTGCAGCATTCTCTTTTGGAAGG...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTCCGACATCATACCCCTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSPTSYP*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGGGGTATGATGTCGG...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACCCCACCAGCTGTTTTTaGACAGCCCAAATGTTAAGA +
Preference number: 4 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHPTSCF*TAQMLR
Trigger: TCTTAACATTTGGGCTGTGCAAAAACAGCTGGTGGG...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTAAGTTTAGACTGCACTaGGCTGTTCCCATCACAGTC +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTKFRLH*AVPITV
Trigger: GACTGTGATGGGAACAGCCCAGTGCAGTCTAAACTT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACCCCAATGGCTGGTGCTaGTTAGTCATGTATGCAGGT +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHPNGWC*LVMYAG
Trigger: ACCTGCATACATGACTAACCAGCACCAGCCATTGGG...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGGAGGCTGCCAGGGGCTaGTGGATGGGGAATAGGGAG +
Preference number: 4 (lower is better)
Translates to: SVWHCLSQERWASETYYLEAARG*WMGNRE
Trigger: CTCCCTATTCCCCATCCACCAGCCCCTGGCAGCCTC...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCAACTTGCTTAGTCATCTaGAGATCCTGTAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPTCLVI*RSCSCC
Trigger: ACAACAGCTACAGGATCTTCAGATGACTAAGCAAGT...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCAGATTTCCTTGGCCTCTaGCTTTCAGTGATGAAAATG +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPDFLGL*LSVMKM
Trigger: CATTTTCATCACTGAAAGTCAGAGGCCAAGGAAATC...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACTTTGCTTGGGCTCCTTaGCCCTATTCAAAAATGGAA +
Preference number: 4 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHFAWAP*PYSKME
Trigger: TTCCATTTTTGAATAGGGTCAAGGAGCCCAAGCAAA...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCAGGGTCAAATGATTTTTaGTGGTGCCAAGACCATTCA +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPGSNDF*WCQDHS
Trigger: TGAATGGTCTTGGCACCATCAAAAATCATTTGACCC...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACAAGAGAATGCTGCAGTaGCGACAGAAATGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHKRMLQ*RQKCSV
Trigger: CACACTGCATTTCTGTCGGCACTGCAGCATTCTCTT...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAACCAGCAGGGGTGCCCTaGCAGAACCTGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQPAGVP*QNLCWM
Trigger: CATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTGG...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATCCAGCAGGGGTGCCCTaGCAGAACCTGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNPAGVP*QNLCWM
Trigger: CATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTGG...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAACAACCCCAGCAGGGGTaGCCTGCCAGAACCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQQPQQG*PARTCA
Trigger: AGCACAGGTTCTGGCAGGGCACCCCTGCTGGGGTTG...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTCACAGTCCAGGATTATaGACAGACCAGCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSHSPGL*TDQPPT
Trigger: GGTTGGGGGCTGGTCTGTGCATAATCCTGGACTGTG...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCAGAGCCTGTACGTCATaGAGTAAACCACGACAGCTA +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAARACTS*SKPRQL
Trigger: TAGCTGTCGTGGTTTACTGCATGACGTACAGGCTCT...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCACTGGTTAGTCATGTATaGAGGTCCTTCTTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPLVSHV*RSFFFL
Trigger: GAGGAAAAAGAAGGACCTGCATACATGACTAACCAG...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGTGGCACCAGCAGTaGCTTCTCCTGCTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYLWHQQ*LLLLAP
Trigger: AGGGGCAAGCAGGAGAAGGCACTGCTGGTGCCACAG...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCTCCCTAAGACAAGAATaGCTGTCATTGCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAASLRQE*LSLPWV
Trigger: AACCCAGGGCAATGACAGCCATTCTTGTCTTAGGGA...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACGCTTGCCCCTCCAGCTaGTGCTCTGGGCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYACPSS*CSGHLC
Trigger: ACAGAGATGCCCAGAGCACCAGCTGGAGGGGCAAGC...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTAAGCCCAGGGTCATATaGGAATTCTGGCAAACATCT +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTKPRVI*EFWQTS
Trigger: AGATGTTTGCCAGAATTCCCATATGACCCTGGGCTT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTACATGCACTGGTGCGTaGCCCCCTGGTGGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVTCTGA*PPGGGF
Trigger: GAAGCCGCCACCAGGGGGCCACGCACCAGTGCATGT...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTACTTGCTTAGTCATCTaGAGATCCTGTAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTTCLVI*RSCSCC
Trigger: ACAACAGCTACAGGATCTTCAGATGACTAAGCAAGT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTGATTTCCTTGGCCTCTaGCTTTCAGTGATGAAAATG +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTDFLGL*LSVMKM
Trigger: CATTTTCATCACTGAAAGTCAGAGGCCAAGGAAATC...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACCTATCCTATGCCTGCTaGGGGGATTTTTCATACTCT +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHLSYAC*GDFSYS
Trigger: AGAGTATGAAAAATCCCCTCAGCAGGCATAGGATAG...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTTTTGCTTGGGCTCCTTaGCCCTATTCAAAAATGGAA +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTFAWAP*PYSKME
Trigger: TTCCATTTTTGAATAGGGTCAAGGAGCCCAAGCAAA...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCCCTGTTCCATCTGGGTaGTTCTGTGGAGCTAATAAA +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAAPVPSG*FCGANK
Trigger: TTTATTAGCTCCACAGAATCACCCAGATGGAACAGG...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACAGGCTCCTGGGGTCCTaGATTATCTACTTCATTGTA +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHRLLGS*IIYFIV
Trigger: TACAATGAAGTAGATAATTCAGGACCCCAGGAGCCT...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTAAGAACAAAACAGAGTaGAAGGCAATCCACGGAATG +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTKNKTE*KAIHGM
Trigger: CATTCCGTGGATTGCCTTTCACTCTGTTTTGTTCTT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACCCTTCCAAAAGAGAATaGTGCAGTGCCGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHPSKRE*CSADRN
Trigger: ATTTCTGTCGGCACTGCAGCATTCTCTTTTGGAAGG...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTAAGAATGGCTGTCATTaGCCTGGGTTCACTTTCTAT +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTKNGCH*PGFTFY
Trigger: ATAGAAAGTGAACCCAGGGCAATGACAGCCATTCTT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCCAACCCCAGCAGGGGTaGCCTGCCAGAACCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SILLAVSVTSTKNVELTTQPQQG*PARTCA
Trigger: AGCACAGGTTCTGGCAGGGCACCCCTGCTGGGGTTG...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTAGAGACTCAGATATTTaGACACCCATGTTTACGGCA +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTRDSDI*TPMFTA
Trigger: TGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCAATTAAGCGAGGATTGTaGTGGTCATCAAGAACCTTT +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPIKRGL*WSSRTF
Trigger: AAAGGTTCTTGATGACCACCACAATCCTCGCTTAAT...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACATTAAGCGAGGATTGTaGTGGTCATCAAGAACCTTT +
Preference number: 4 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHIKRGL*WSSRTF
Trigger: AAAGGTTCTTGATGACCACCACAATCCTCGCTTAAT...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACATGCACAATAATCTTTaGGTGGTGGGACTGATTTTC +
Preference number: 4 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHMHNNL*VVGLIF
Trigger: GAAAATCAGTCCCACCACCCAAAGATTATTGTGCAT...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGAGGTGGGAGGATCACTaGAGGGTGAGGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SVWHCLSQERWASETYYLRWEDH*RVRWED
Trigger: ATCCTCCCACCTCACCCTCCAGTGATCCTCCCACCT...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTCCTACCGGCTCAGTaGCATTTAGCCCATGGGACG +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYLLPAQ*HLAHGT
Trigger: CGTCCCATGGGCTAAATGCCACTGAGCCGGTAGGAG...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCCCACGTGGCCTGTATTaGGGCAGGTGCCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSPRGLY*GRCPGE
Trigger: CTCCCCAGGGCACCTGCCCCAATACAGGCCACGTGG...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTAAATGGCAGATCCACGTaGCCTGTATTGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVNGRST*PVLGQV
Trigger: CACCTGCCCCAATACAGGCCACGTGGATCTGCCATT...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCATATTCAACAAAATACTaGCCAACAGGATTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPYSTKY*PTGFSG
Trigger: CCCACTGAATCCTGTTGGCCAGTATTTTGTTGAATA...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCAAGCCCAGGGTCATATaGGAATTCTGGCAAACATCT +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAAKPRVI*EFWQTS
Trigger: AGATGTTTGCCAGAATTCCCATATGACCCTGGGCTT...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCGGTGGGAGGATCACTTaGGCCTGGGGGACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFGGRIT*AWGTEV
Trigger: AACCTCTGTCCCCCAGGCTCAAGTGATCCTCCCACC...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCACTGTTGAGATACATATaGGTGCAGGGTGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: PRHSREKQWQIHVACIGALLRYI*VQGGCW
Trigger: CCAGCATCCACCCTGCACTCATATGTATCTCAACAG...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACAAGCAGCAATTCTGTTaGGATACATATGAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHKQQFC*DTYECR
Trigger: CCTGCACTCATATGTATCTCAACAGAATTGCTGCTT...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGTGAAACTTACTACCTGGCTTTAGGCTCCTGGGGTCCTGAATTATCTACTTCAGGCAGAGGCTACACCTaGGCAGCTCCTACCGGCTCA +
Preference number: 4 (lower is better)
Translates to: SETYYLALGSWGPELSTSGRGYT*AAPTGS
Trigger: TGAGCCGGTAGGAGCTGCTCAGGTGTAGCCTCTGCC...TGAAGTAGATAATTCAGGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTGGTGTCTCTTCTATTTaGCACAGATGTCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTGVSSI*HRCPHF
Trigger: AAAATGAGGACATCTGTGTCAAATAGAAGAGACACC...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCGATTCAGTGGGACATTaGAAGGATTACACATCATGG +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAADSVGH*KDYTSW
Trigger: CCATGATGTGTAATCCTTTCAATGTCCCACTGAATC...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACGTAGAGCTTAGGTCTTaGAGAAGATCTTTGATTAAG +
Preference number: 4 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHVELRS*RRSLIK
Trigger: CTTAATCAAAGATCTTCTGCAAGACCTAAGCTCTAC...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTACAGTGCCGACAGAAATaGAGTGTGTCTCCGTACTGC +
Preference number: 4 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVQCRQK*SVSPYC
Trigger: GCAGTACGGAGACACACTGCATTTCTGTCGGCACTG...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATCCCTGCCAGAACCTGTaGTGGATGCCTAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNPCQNL*WMPRST
Trigger: TGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGG...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCTACGTTTCTATCCTATaGCTGCTGAGGGGATTTTTC +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAAYVSIL*LLRGFF
Trigger: GAAAAATCCCCTCAGCAGGCATAGGATAGAAACGTA...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAACCGACATCATACCCCTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQPTSYP*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGGGGTATGATGTCGG...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCCTAATCCCTTGGCTTTaGCATTGGGTAGCATTTGAT +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAALIPWL*HWVAFD
Trigger: ATCAAATGCTACCCAATGGCAAAGCCAAGGGATTAG...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAATGCTGGGGGTGCATGTaGAGGTGCCACGTTACCACC +
Preference number: 4 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKCWGCM*RCHVTT
Trigger: GGTGGTAACGTGGCACCTGCACATGCACCCCCAGCA...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACGAGTTTAGAGAGGACTaGTGGGGGTGCATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYEFRED*WGCMCR
Trigger: CCTGCACATGCACCCCCAGCAGTCCTCTCTAAACTC...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCAGCAGTGCCTTCTCCTaGTTGCCCCTCCAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFSSAFS*LPLQLV
Trigger: CACCAGCTGGAGGGGCAAGCAGGAGAAGGCACTGCT...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCTGGCTGTCATTGCCCTaGGTTCACTTTCTATTCAAA +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAAWLSLP*VHFLFK
Trigger: TTTGAATAGAAAGTGAACCCAGGGCAATGACAGCCA...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACTGGCTGTCATTGCCCTaGGTTCACTTTCTATTCAAA +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHWLSLP*VHFLFK
Trigger: TTTGAATAGAAAGTGAACCCAGGGCAATGACAGCCA...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACTGCCAGAACCTGTGCTaGATGCCTAGGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYCQNLC*MPRSTE
Trigger: CTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCA...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTATGCACAATAATCTTTaGGTGGTGGGACTGATTTTC +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTMHNNL*VVGLIF
Trigger: GAAAATCAGTCCCACCACCCAAAGATTATTGTGCAT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATAGGTGGGAGGATCACTaGAGGGTGAGGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDRWEDH*RVRWED
Trigger: ATCCTCCCACCTCACCCTCCAGTGATCCTCCCACCT...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTGCTGCCAGGGGCTGGTaGATGGGGAATAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVAARGW*MGNREL
Trigger: CAACTCCCTATTCCCCATCCACCAGCCCCTGGCAGC...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCCTTTTCTGGCCACAGTaGGATGAAACTAGAAATCAG +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAALFWPQ*DETRNQ
Trigger: CTGATTTCTAGTTTCATCCCACTGTGGCCAGAAAAG...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTATTGTCCAAAAAGTTTaGAACACAGCCACATGCACT +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTIVQKV*NTATCT
Trigger: AGTGCATGTGGCTGTGTTCCAAACTTTTTGGACAAT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACCAAAGAATGTGGAGCTaGCCACCTAAAGTATTTTTG +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHQRMWS*PPKVFL
Trigger: CAAAAATACTTTAGGTGGTCAGCTCCACATTCTTTG...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTGCCTTAAAATATGTTTaGCTCATGATGTTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTALKYV*LMMLAV
Trigger: TACAGCCAACATCATGAGTCAAACATATTTTAAGGC...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACTTGAGCTCAAACTCCTaGGACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYLSSNS*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAGGAGTTTGAGCTCAA...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATTCATCTCACAGATGCTaGGGGCGAGAATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDSSHRC*GREWQQ
Trigger: CTGCTGCCATTCTCGCCCTCAGCATCTGTGAGATGA...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTGAAGGTTGCACAGTATaGATGTATTTAATGCCACTA +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTEGCTV*MYLMPL
Trigger: TAGTGGCATTAAATACATTCATACTGTGCAACCTTC...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCCATTGGATTTGGCAGTaGTTTCTTAGATATGACACC +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAAHWIWQ*FLRYDT
Trigger: GGTGTCATATCTAAGAAATCACTGCCAAATCCAATG...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAAGAGGTCGATGAAGTaGTGCGGAGACACAGGCGTG +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNKRSMK*CGDTGV
Trigger: CACGCCTGTGTCTCCGCAGCACTTCATCGACCTCTT...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
ENST00000519274.1
CDS-3UTR GCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATTGCCCGTTGTTGGGCTaGGTGTGCACACTTCATACC +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNCPLLG*VCTLHT
Trigger: GGTATGAAGTGTGCACACGCAGCCCAACAACGGGCA...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCCCCTGCCAGAACCTGTaGTGGATGCCTAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: SILLAVSVTSTKNVELTTPCQNL*WMPRST
Trigger: TGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGG...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATCACAGTCCAGGATTATaGACAGACCAGCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNHSPGL*TDQPPT
Trigger: GGTTGGGGGCTGGTCTGTGCATAATCCTGGACTGTG...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCAAAGTAGAAATGATTTaGTTGGGCTCCTTGACCCTA +
Preference number: 4 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAAKVEMI*LGSLTL
Trigger: TAGGGTCAAGGAGCCCAAGCAAATCATTTCTACTTT...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGGAGAGTGTCTGGCATTaGCTTTCACAGGAGCGATGG +
Preference number: 4 (lower is better)
Translates to: SVWHCLSQERWASETYYLESVWH*LSQERW
Trigger: CCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACGGCCCCAATGGCTGGTaGTGGTTAGTCATGTATGCA +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYGPNGW*WLVMYA
Trigger: TGCATACATGACTAACCAGCACCAGCCATTGGGGCC...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATGAGTTTAGAGAGGACTaGTGGGGGTGCATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNEFRED*WGCMCR
Trigger: CCTGCACATGCACCCCCAGCAGTCCTCTCTAAACTC...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AGTGAAACTTACTACCTGGCTTTAGGCTCCTGGGGTCCTGAATTATCTACTTCATGGAACACAGCCACATaGACTGGTGCGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SETYYLALGSWGPELSTSWNTAT*TGAWPP
Trigger: AGGGGGCCACGCACCAGTGCATGTGGCTGTGTTCCA...TGAAGTAGATAATTCAGGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCGGAACCAATCCCCCGTaGATACAGAGGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SILLAVSVTSTKNVELTTGTNPP*IQRAGC
Trigger: ACAGCCAGCCCTCTGTATCCACGGGGGATTGGTTCC...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCACTGTTGCTAATCCCTTaGCTTTGCCATTGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PRHSREKQWQIHVACIGALLLIP*LCHWVA
Trigger: TGCTACCCAATGGCAAAGCCAAGGGATTAGCAACAG...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGGAGGGCCCCAATGGCTaGTGCTGGTTAGTCATGTAT +
Preference number: 4 (lower is better)
Translates to: SVWHCLSQERWASETYYLEGPNG*CWLVMY
Trigger: ATACATGACTAACCAGCACCAGCCATTGGGGCCCTC...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAACTCCTACCGGCTCAGTaGCATTTAGCCCATGGGACG +
Preference number: 4 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKLLPAQ*HLAHGT
Trigger: CGTCCCATGGGCTAAATGCCACTGAGCCGGTAGGAG...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATTTAGAGAGGACTGCTaGGGGTGCATGTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQFREDC*GCMCRC
Trigger: GCACCTGCACATGCACCCCCAGCAGTCCTCTCTAAA...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCCCAGGGGCTGGTGGATaGGGAATAGGGAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSPGAGG*GIGSWC
Trigger: GCACCAACTCCCTATTCCCCATCCACCAGCCCCTGG...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCGCTGCCAGGGGCTGGTaGATGGGGAATAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSAARGW*MGNREL
Trigger: CAACTCCCTATTCCCCATCCACCAGCCCCTGGCAGC...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAAGCCACTACTGCCAAGTaGCAAGAGAGCCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKATTAK*QESPMA
Trigger: AGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGC...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CAA 72 bp CCAAGCCCTGCTTCACTCCCCTGTGTGTACCTATCCTaGCAGCCTCAAATTCCCGGCCAATCTTGTTTCATT +
Preference number: 4 (lower is better)
Translates to: PSPASLPCVYLS*QPQIPGQSCFI
Trigger: AATGAAACAAGATTGGCCGGGAATTTGAGGCTGCAAGGATAGGTACACACAGGGGAGTGAAGCAGGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATCGTGCAGGGGTGTCCTaGGTCCTTCCAAAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDRAGVS*VLPKEN
Trigger: ATTCTCTTTTGGAAGGACTCAGGACACCCCTGCACG...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
CDS-3UTR TCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATACAGAACACTCACTATaGGCCCTGCACAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNTEHSL*ALHRQQ
Trigger: CTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGT...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
ENST00000519274.1
CDS-3UTR TCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTAGGCTCCTGGGGTCCTaGATTATCTACTTCATTGTA +
Preference number: 4 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSRLLGS*IIYFIV
Trigger: TACAATGAAGTAGATAATTCAGGACCCCAGGAGCCT...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAGACACCAGCCCTGAGTaGGCAGCGCAGACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRDTSPE*AAQTEN
Trigger: GTTCTCAGTCTGCGCTGCTCACTCAGGGCTGGTGTC...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTGACACCAGCCCTGAGTaGGCAGCGCAGACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVDTSPE*AAQTEN
Trigger: GTTCTCAGTCTGCGCTGCTCACTCAGGGCTGGTGTC...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATAAATCGGTCTGCTCCTaGGAGGCTACTGCATGGCTT +
Preference number: 4 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDKSVCS*EATAWL
Trigger: AAGCCATGCAGTAGCCTCTCAGGAGCAGACCGATTT...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACATAAGGAGTGGGGCTTaGGTGAAGACAGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYIRSGA*VKTEAA
Trigger: TGCTGCTTCTGTCTTCACTCAAGCCCCACTCCTTAT...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACTTCCTGCTGAAATTCTaGAGGCAGAGGCTACACCTG +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYFLLKF*RQRLHL
Trigger: CAGGTGTAGCCTCTGCCTTCAGAATTTCAGCAGGAA...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATCAGTGCCGACAGAAATaGAGTGTGTCTCCGTACTGC +
Preference number: 4 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDQCRQK*SVSPYC
Trigger: GCAGTACGGAGACACACTGCATTTCTGTCGGCACTG...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCAGGTCGATGAAGTGCTaGGGAGACACAGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: SILLAVSVTSTKNVELTTRSMKC*GDTGVK
Trigger: CTTCACGCCTGTGTCTCCGCAGCACTTCATCGACCT...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCTGTGGAAATATGCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATAAGGTCGATGAAGTGCTaGGGAGACACAGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: ACGNMPAQQNSWNPTLLIRSMKC*GDTGVK
Trigger: CTTCACGCCTGTGTCTCCGCAGCACTTCATCGACCT...TATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
CDS-3UTR GCA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAATGCCCGTTGTTGGGCTaGGTGTGCACACTTCATACC +
Preference number: 4 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKCPLLG*VCTLHT
Trigger: GGTATGAAGTGTGCACACGCAGCCCAACAACGGGCA...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAAAGAACCTGTGCTGGATaGCTAGGAGCACAGAGACCA +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQRTCAG*LGAQRP
Trigger: TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCT...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp AGTGAAACTTACTACCTGGCTTTAGGCTCCTGGGGTCCTGAATTATCTACTTCACCCTGCCAGAACCTGTaGTGGATGCCTAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: SETYYLALGSWGPELSTSPCQNL*WMPRST
Trigger: TGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGG...TGAAGTAGATAATTCAGGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACATACTCTTTTCAGCATaGACAATAATCTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHILFSA*TIIFGW
Trigger: CCACCCAAAGATTATTGTGCATGCTGAAAAGAGTAT...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAAAATGTAAGCCATCCCTaGTTACCTGCCCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQNVSHP*LPAQLP
Trigger: TGGGAGCTGGGCAGGTAAGCAGGGATGGCTTACATT...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTACCAAAGTTGAGGGTCTaGCTCCTCTATGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVPKLRV*LLYAET
Trigger: TGTTTCTGCATAGAGGAGGCAGACCCTCAACTTTGG...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACTGCTGGGGGTGCATGTaGAGGTGCCACGTTACCACC +
Preference number: 4 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDCWGCM*RCHVTT
Trigger: GGTGGTAACGTGGCACCTGCACATGCACCCCCAGCA...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACGCAGCAGCCATACACTaGCTGAGTTTAGAGAGGACT +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYAAAIH*LSLERT
Trigger: AGTCCTCTCTAAACTCAGGCAGTGTATGGCTGCTGC...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTGTGCCTTCTCCTGCTTaGCCCTCCAGCTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVVPSPA*PSSWCS
Trigger: AGAGCACCAGCTGGAGGGGCAAGCAGGAGAAGGCAC...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCAGTAAGAGTAGGAGACTaGAGTAGCCCACTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: PRHSREKQWQIHVACIGAVRVGD*SSPLSV
Trigger: TACTGAAAGTGGGCTACTGCAGTCTCCTACTCTTAC...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTACAATCTTTACCATCTaGTCCAAGCCCTGCTTCACT +
Preference number: 4 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSTIFTI*SKPCFT
Trigger: AGTGAAGCAGGGCTTGGAGCAGATGGTAAAGATTGT...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCTGCCAGAACCTGTGCTaGATGCCTAGGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SILLAVSVTSTKNVELTTCQNLC*MPRSTE
Trigger: CTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCA...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCCACTGGAGGGTGAGGTaGGAGGATCACTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSHWRVR*EDHLSL
Trigger: CAGGCTCAAGTGATCCTCCCACCTCACCCTCCAGTG...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAGTGGTCCTGACTGCTTaGGAGGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRVVLTA*EAEVGG
Trigger: TCCTCCCACCTCAGCCTCCCAAGCAGTCAGGACCAC...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAACATAGAGGGCCCCAATaGCTGGTGCTGGTTAGTCAT +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQHRGPQ*LVLVSH
Trigger: ATGACTAACCAGCACCAGCCATTGGGGCCCTCTATG...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAAAGTGAACGCTGGTTATaGTCCAAGAGCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKSERWL*SKSQPR
Trigger: CCTGGGCTGGCTCTTGGACCATAACCAGCGTTCACT...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGATCCTCAGTGAACGCTaGTTATGGTCCAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SVWHCLSQERWASETYYLILSER*LWSKSQ
Trigger: CTGGCTCTTGGACCATAACCAGCGTTCACTGAGGAT...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTATAAAATATCTTTTCTaGCCACAGTGGGATGAAACT +
Preference number: 4 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTIKYLF*PQWDET
Trigger: AGTTTCATCCCACTGTGGCCAGAAAAGATATTTTAT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCGCCACTACTGCCAAGTaGCAAGAGAGCCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSATTAK*QESPMA
Trigger: AGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGC...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GCCTGTGGAAATATGCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATAACAGAACACTCACTATaGGCCCTGCACAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: ACGNMPAQQNSWNPTLLITEHSL*ALHRQQ
Trigger: CTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGT...TATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
CDS-3UTR TCA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTACTATCCTATGCCTGCTaGGGGGATTTTTCATACTCT +
Preference number: 4 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVLSYAC*GDFSYS
Trigger: AGAGTATGAAAAATCCCCTCAGCAGGCATAGGATAG...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCATTTGCTTGGGCTCCTTaGCCCTATTCAAAAATGGAA +
Preference number: 4 (lower is better)
Translates to: PRHSREKQWQIHVACIGAFAWAP*PYSKME
Trigger: TTCCATTTTTGAATAGGGTCAAGGAGCCCAAGCAAA...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTTTGAGCTCAAACTCCTaGGACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVLSSNS*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAGGAGTTTGAGCTCAA...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTGGGACTAAAGGGAGGTaGGTGGTGTCCATCACGTGC +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVGTKGR*VVSITC
Trigger: GCACGTGATGGACACCACTCACCTCCCTTTAGTCCC...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAAACCGCATCCTCAGTaGACGCTGGTTATGGTCCAA +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNKPHPQ*TLVMVQ
Trigger: TTGGACCATAACCAGCGTTCACTGAGGATGCGGTTT...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTAAACACACACCTGATTaGAAAATGGACAAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSKHTPD*KMDKEP
Trigger: GGGCTCTTTGTCCATTTTTCAATCAGGTGTGTGTTT...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCAAAGAACAAAACAGAGTaGAAGGCAATCCACGGAATG +
Preference number: 4 (lower is better)
Translates to: PRHSREKQWQIHVACIGAKNKTE*KAIHGM
Trigger: CATTCCGTGGATTGCCTTTCACTCTGTTTTGTTCTT...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCAAGAGGTCGATGAAGTaGTGCGGAGACACAGGCGTG +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSKRSMK*CGDTGV
Trigger: CACGCCTGTGTCTCCGCAGCACTTCATCGACCTCTT...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
CDS-3UTR GCA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATACTCACTATGAGCCCTaGACAGACAGCAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDTHYEP*TDSRIH
Trigger: GTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGT...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
ENST00000519274.1
CDS-3UTR GCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATACTCACTATGAGCCCTaGACAGACAGCAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNTHYEP*TDSRIH
Trigger: GTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGT...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
ENST00000519274.1
CDS-3UTR GCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCTTGTTGGGCTGCGTGTaGACACTTCATACCCCGATC +
Preference number: 4 (lower is better)
Translates to: SILLAVSVTSTKNVELTTLLGCV*TLHTPI
Trigger: GATCGGGGTATGAAGTGTGCACACGCAGCCCAACAA...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATAGAGCACAGAGACCACTaGCCGTTGTTGGGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: MIESRDSDICTPMFTAAIEHRDH*PLLGCV
Trigger: CACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTC...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCCAACCCCAGCAGGGGTaGCCTGCCAGAACCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFQPQQG*PARTCA
Trigger: AGCACAGGTTCTGGCAGGGCACCCCTGCTGGGGTTG...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCGAGGCCCCAGGTATTTaGATCGCCTCAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFEAPGI*IASGET
Trigger: AGTTTCTCCTGAGGCGATGCAAATACCTGGGGCCTC...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACAAAAAGAAATACCTGTaGTTCAGGGATAATGGAAAC +
Preference number: 4 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHKKKYL*FRDNGN
Trigger: GTTTCCATTATCCCTGAAGCACAGGTATTTCTTTTT...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCTGTGGAAATATGCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGCCTGTGGAAATATaGCAGCCCAGCAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: ACGNMPAQQNSWNPTLLIWPVEI*QPSRTA
Trigger: AGCTGTTCTGCTGGGCTGGCATATTTCCACAGGCCA...TATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
CDS-3UTR GCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCCAAAGTTGAGGGTCTaGCTCCTCTATGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYPKLRV*LLYAET
Trigger: TGTTTCTGCATAGAGGAGGCAGACCCTCAACTTTGG...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATACTGTGGCACCAGCAGTaGCTTCTCCTGCTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: MIESRDSDICTPMFTAAILWHQQ*LLLLAP
Trigger: AGGGGCAAGCAGGAGAAGGCACTGCTGGTGCCACAG...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTAGAGACTCAGATATTTaGACACCCATGTTTACGGCA +
Preference number: 4 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSRDSDI*TPMFTA
Trigger: TGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCT...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTACCCACCAGCTGTTTTTaGACAGCCCAAATGTTAAGA +
Preference number: 4 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVPTSCF*TAQMLR
Trigger: TCTTAACATTTGGGCTGTGCAAAAACAGCTGGTGGG...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAACCACTGCCCGTTGTTaGGCTGCGTGTGCACACTTC +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRTTARC*AACAHF
Trigger: GAAGTGTGCACACGCAGCCCAACAACGGGCAGTGGT...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTACCACTGCCCGTTGTTaGGCTGCGTGTGCACACTTC +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVTTARC*AACAHF
Trigger: GAAGTGTGCACACGCAGCCCAACAACGGGCAGTGGT...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGAAGTTTAGACTGCACTaGGCTGTTCCCATCACAGTC +
Preference number: 4 (lower is better)
Translates to: SVWHCLSQERWASETYYLKFRLH*AVPITV
Trigger: GACTGTGATGGGAACAGCCCAGTGCAGTCTAAACTT...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCTGTGGAAATATGCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGTGTCCATGGCCTGTaGAAATATGCCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ACGNMPAQQNSWNPTLLICVHGL*KYASPA
Trigger: TGCTGGGCTGGCATATTTCCACAGGCCATGGACACA...TATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
CDS-3UTR CCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTCATAGAGGGCCCCAATaGCTGGTGCTGGTTAGTCAT +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVHRGPQ*LVLVSH
Trigger: ATGACTAACCAGCACCAGCCATTGGGGCCCTCTATG...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATCATATGAGTGCAGGGTaGATGCTGGTGTCAGCCATA +
Preference number: 4 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDHMSAG*MLVSAI
Trigger: TATGGCTGACACCAGCATCCACCCTGCACTCATATG...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCAATGGCAGATCCACGTaGCCTGTATTGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSNGRST*PVLGQV
Trigger: CACCTGCCCCAATACAGGCCACGTGGATCTGCCATT...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CAA 72 bp CTGAGAACAGGTCCGAGAATGACTGGAGATTCTATCTaGAGAGTGTCTGGCATTGCCTTTCACAGGAGCGAT +
Preference number: 4 (lower is better)
Translates to: LRTGPRMTGDSI*RVSGIAFHRSD
Trigger: ATCGCTCCTGTGAAAGGCAATGCCAGACACTCTCAAGATAGAATCTCCAGTCATTCTCGGACCTGTTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTGGAGCGATGGGCAAGTaGAACTTACTACCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVGAMGK*NLLPGF
Trigger: AAAGCCAGGTAGTAAGTTTCACTTGCCCATCGCTCC...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACAGGCAGGCTTGCTTCTaGCTTTTCTCAGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDRQACF*LFSEGS
Trigger: GCTGCCCTCTGAGAAAAGTCAGAAGCAAGCCTGCCT...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGGGGACTAAAGGGAGGTaGGTGGTGTCCATCACGTGC +
Preference number: 4 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKGTKGR*VVSITC
Trigger: GCACGTGATGGACACCACTCACCTCCCTTTAGTCCC...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCGGAGTGGGGCTTGAGTaGAGACAGAAGCAGCAATTC +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSGVGLE*RQKQQF
Trigger: GAATTGCTGCTTCTGTCTTCACTCAAGCCCCACTCC...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTTTCCTGCTGAAATTCTaGAGGCAGAGGCTACACCTG +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVFLLKF*RQRLHL
Trigger: CAGGTGTAGCCTCTGCCTTCAGAATTTCAGCAGGAA...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCGTCACTCTGTGGATTTaGGCCAGTGAGGATTGGAAG +
Preference number: 4 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFVTLWI*ASEDWK
Trigger: CTTCCAATCCTCACTGGCTCAAATCCACAGAGTGAC...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCAAACCGCATCCTCAGTaGACGCTGGTTATGGTCCAA +
Preference number: 4 (lower is better)
Translates to: SILLAVSVTSTKNVELTTKPHPQ*TLVMVQ
Trigger: TTGGACCATAACCAGCGTTCACTGAGGATGCGGTTT...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAAAAGAGAATGCTGCAGTaGCGACAGAAATGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQKRMLQ*RQKCSV
Trigger: CACACTGCATTTCTGTCGGCACTGCAGCATTCTCTT...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACAGGTCGATGAAGTGCTaGGGAGACACAGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDRSMKC*GDTGVK
Trigger: CTTCACGCCTGTGTCTCCGCAGCACTTCATCGACCT...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCAGAACCTGTGCTGGATaGCTAGGAGCACAGAGACCA +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSRTCAG*LGAQRP
Trigger: TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCT...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTATACGTTTCTATCCTATaGCTGCTGAGGGGATTTTTC +
Preference number: 4 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVYVSIL*LLRGFF
Trigger: GAAAAATCCCCTCAGCAGGCATAGGATAGAAACGTA...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AGTGAAACTTACTACCTGGCTTTAGGCTCCTGGGGTCCTGAATTATCTACTTCATGGCCTGTGGAAATATaGCAGCCCAGCAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: SETYYLALGSWGPELSTSWPVEI*QPSRTA
Trigger: AGCTGTTCTGCTGGGCTGGCATATTTCCACAGGCCA...TGAAGTAGATAATTCAGGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCTGGCCTGTGGAAATATaGCAGCCCAGCAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSWPVEI*QPSRTA
Trigger: AGCTGTTCTGCTGGGCTGGCATATTTCCACAGGCCA...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
CDS-3UTR GCA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATAGAGCCTGTACGTCATaGAGTAAACCACGACAGCTA +
Preference number: 4 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDRACTS*SKPRQL
Trigger: TAGCTGTCGTGGTTTACTGCATGACGTACAGGCTCT...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCGGCCCCAATGGCTGGTaGTGGTTAGTCATGTATGCA +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSGPNGW*WLVMYA
Trigger: TGCATACATGACTAACCAGCACCAGCCATTGGGGCC...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCAGCAGTGCCTTCTCCTaGTTGCCCCTCCAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFSSAFS*LPLQLV
Trigger: CACCAGCTGGAGGGGCAAGCAGGAGAAGGCACTGCT...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGGGGAATGTAAAATGGTaGAGCCACCGTGTAAAACAC +
Preference number: 4 (lower is better)
Translates to: SVWHCLSQERWASETYYLGNVKW*SHRVKH
Trigger: GTGTTTTACACGGTGGCTGCACCATTTTACATTCCC...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAAGTACTGCTCCTTCGCTaGGTAATGTTTCTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQVLLLR*VMFLKC
Trigger: GCACTTCAGAAACATTACCCAGCGAAGGAGCAGTAC...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTTGCCAGAACCTGTGCTaGATGCCTAGGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVCQNLC*MPRSTE
Trigger: CTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCA...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGATGCCAGAACCTGTGCTaGATGCCTAGGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRCQNLC*MPRSTE
Trigger: CTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCA...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAAGTTTAGACTGCACTaGGCTGTTCCCATCACAGTC +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNKFRLH*AVPITV
Trigger: GACTGTGATGGGAACAGCCCAGTGCAGTCTAAACTT...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAAAAGTTTAGACTGCACTaGGCTGTTCCCATCACAGTC +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQKFRLH*AVPITV
Trigger: GACTGTGATGGGAACAGCCCAGTGCAGTCTAAACTT...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTAAGGTCCGAGAATGACTaGAGATTCTATCTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVRSEND*RFYLES
Trigger: ACTCTCAAGATAGAATCTCCAGTCATTCTCGGACCT...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTGGAAGGGATAAGGAGTaGGGCTTGAGTGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVGRDKE*GLSEDR
Trigger: TCTGTCTTCACTCAAGCCCCACTCCTTATCCCTTCC...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGCTTGCAGAAGATCTTTaGTTAAGCGAGGATTGTGGT +
Preference number: 4 (lower is better)
Translates to: SVWHCLSQERWASETYYLLAEDL*LSEDCG
Trigger: ACCACAATCCTCGCTTAATCAAAGATCTTCTGCAAG...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAAGGTGGGAGGATCACTTaGGCCTGGGGGACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: STDEYTNKMWSIHRISLKGGRIT*AWGTEV
Trigger: AACCTCTGTCCCCCAGGCTCAAGTGATCCTCCCACC...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCCTGGAGATTCTATCTTaGGAGTGTCTGGCATTGCCT +
Preference number: 4 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFLEILS*ECLALP
Trigger: AGGCAATGCCAGACACTCTCAAGATAGAATCTCCAG...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTACTGAGAGGAAGAAGTaGAACTGTCTATTCATAGAT +
Preference number: 4 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSTERKK*NCLFID
Trigger: ATCTATGAATAGACAGTTTCACTTCTTCCTCTCAGT...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACAAAGGACATCTAGACTaGGAGGAAGAAGTGAAACTG +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYKGHLD*EEEVKL
Trigger: CAGTTTCACTTCTTCCTCTCAGTCTAGATGTCCTTT...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCACAGCACATGATCTTATaGAGGCCAAAAACTACATTA +
Preference number: 4 (lower is better)
Translates to: PRHSREKQWQIHVACIGAQHMIL*RPKTTL
Trigger: TAATGTAGTTTTTGGCCTTCATAAGATCATGTGCTG...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACTCTAAGCTTATCCTATaGGATGGACACCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYSKLIL*DGHQNP
Trigger: TGGGTTTTGGTGTCCATCTCATAGGATAAGCTTAGA...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGAATCAGGTTGGCAAGTaGAATACAGGCCAAAATTGG +
Preference number: 4 (lower is better)
Translates to: SVWHCLSQERWASETYYLNQVGK*NTGQNW
Trigger: CCAATTTTGGCCTGTATTTCACTTGCCAACCTGATT...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCACTCACTATGAGCCCTaGACAGACAGCAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSTHYEP*TDSRIH
Trigger: GTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGT...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
CDS-3UTR GCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGTGCCCGTTGTTGGGCTaGGTGTGCACACTTCATACC +
Preference number: 4 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKCPLLG*VCTLHT
Trigger: GGTATGAAGTGTGCACACGCAGCCCAACAACGGGCA...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACAATGTAAGCCATCCCTaGTTACCTGCCCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDNVSHP*LPAQLP
Trigger: TGGGAGCTGGGCAGGTAAGCAGGGATGGCTTACATT...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCGAACACACTGTCTCATaGTGTGAGCCAGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFEHTVS*CEPGLF
Trigger: AAAAAGCCCTGGCTCACAGCATGAGACAGTGTGTTC...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACGCTTATCCTATGAGATaGACACCAAAACCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYAYPMR*TPKPKR
Trigger: TCTCTTGGGTTTTGGTGTCCATCTCATAGGATAAGC...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGACTAAAGGGAGGTGAGTaGTGTCCATCACGTGCACAC +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRLKGGE*CPSRAH
Trigger: GTGTGCACGTGATGGACACCACTCACCTCCCTTTAG...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AGTGAAACTTACTACCTGGCTTTAGGCTCCTGGGGTCCTGAATTATCTACTTCACCCAATGGCTGGTGCTaGTTAGTCATGTATGCAGGT +
Preference number: 4 (lower is better)
Translates to: SETYYLALGSWGPELSTSPNGWC*LVMYAG
Trigger: ACCTGCATACATGACTAACCAGCACCAGCCATTGGG...TGAAGTAGATAATTCAGGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCTGTGGAAATATGCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGGGAATAGGGAGTTaGTGCTTAATGGGTACAGAG +
Preference number: 4 (lower is better)
Translates to: ACGNMPAQQNSWNPTLLIWGIGS*CLMGTE
Trigger: CTCTGTACCCATTAAGCACCAACTCCCTATTCCCCA...TATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGGAGGCTGCCAGGGGCTaGTGGATGGGGAATAGGGAG +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKEAARG*WMGNRE
Trigger: CTCCCTATTCCCCATCCACCAGCCCCTGGCAGCCTC...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGCGTGCAGGGGTGTCCTaGGTCCTTCCAAAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKRAGVS*VLPKEN
Trigger: ATTCTCTTTTGGAAGGACTCAGGACACCCCTGCACG...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350302.8
CDS-3UTR TCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATGATTTCCTTGGCCTCTaGCTTTCAGTGATGAAAATG +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNDFLGL*LSVMKM
Trigger: CATTTTCATCACTGAAAGTCAGAGGCCAAGGAAATC...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATTTTGCTTGGGCTCCTTaGCCCTATTCAAAAATGGAA +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNFAWAP*PYSKME
Trigger: TTCCATTTTTGAATAGGGTCAAGGAGCCCAAGCAAA...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGAATATGTTTGACTCATaGTGTTGGCTGTACTACCAG +
Preference number: 4 (lower is better)
Translates to: SVWHCLSQERWASETYYLNMFDS*CWLYYQ
Trigger: CTGGTAGTACAGCCAACATCATGAGTCAAACATATT...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAGGAGCGATGGGCAAGTaGAACTTACTACCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRGAMGK*NLLPGF
Trigger: AAAGCCAGGTAGTAAGTTTCACTTGCCCATCGCTCC...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAAAGGACATCTAGACTaGGAGGAAGAAGTGAAACTG +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNKGHLD*EEEVKL
Trigger: CAGTTTCACTTCTTCCTCTCAGTCTAGATGTCCTTT...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATAAGCAGCAATTCTGTTaGGATACATATGAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDKQQFC*DTYECR
Trigger: CCTGCACTCATATGTATCTCAACAGAATTGCTGCTT...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACTGGAGAAAAAGCATTTaGGACAATGTCATGCCCTTT +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYWRKSI*DNVMPF
Trigger: AAAGGGCATGACATTGTCTCAAATGCTTTTTCTCCA...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATAATCAGGTTGGCAAGTaGAATACAGGCCAAAATTGG +
Preference number: 4 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDNQVGK*NTGQNW
Trigger: CCAATTTTGGCCTGTATTTCACTTGCCAACCTGATT...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCGGTGTCCTGAGTCCTTaGATAGTAAAGCAAGATGGT +
Preference number: 4 (lower is better)
Translates to: SILLAVSVTSTKNVELTTGVLSP*IVKQDG
Trigger: ACCATCTTGCTTTACTATTCAAGGACTCAGGACACC...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382824.5
CDS-3UTR GCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGCAGTGCCGACAGAAATaGAGTGTGTCTCCGTACTGC +
Preference number: 4 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKQCRQK*SVSPYC
Trigger: GCAGTACGGAGACACACTGCATTTCTGTCGGCACTG...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AGTGAAACTTACTACCTGGCTTTAGGCTCCTGGGGTCCTGAATTATCTACTTCAAAGAGAATGCTGCAGTaGCGACAGAAATGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SETYYLALGSWGPELSTSKRMLQ*RQKCSV
Trigger: CACACTGCATTTCTGTCGGCACTGCAGCATTCTCTT...TGAAGTAGATAATTCAGGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCTCCAAAAGAGAATGCTaGAGTGCCGACAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: SILLAVSVTSTKNVELTTSKREC*SADRNA
Trigger: TGCATTTCTGTCGGCACTGCAGCATTCTCTTTTGGA...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCAGGTCGATGAAGTGCTaGGGAGACACAGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFRSMKC*GDTGVK
Trigger: CTTCACGCCTGTGTCTCCGCAGCACTTCATCGACCT...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
CDS-3UTR GCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTACTCACTATGAGCCCTaGACAGACAGCAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVTHYEP*TDSRIH
Trigger: GTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGT...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAAGAATGGCTGTCATTaGCCTGGGTTCACTTTCTAT +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNKNGCH*PGFTFY
Trigger: ATAGAAAGTGAACCCAGGGCAATGACAGCCATTCTT...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATATTGTTGGGCTGCGTGTaGACACTTCATACCCCGATC +
Preference number: 4 (lower is better)
Translates to: MIESRDSDICTPMFTAAILLGCV*TLHTPI
Trigger: GATCGGGGTATGAAGTGTGCACACGCAGCCCAACAA...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGTTGTTGGGCTGCGTGTaGACACTTCATACCCCGATC +
Preference number: 4 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKLLGCV*TLHTPI
Trigger: GATCGGGGTATGAAGTGTGCACACGCAGCCCAACAA...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGGAGCACAGAGACCACTaGCCGTTGTTGGGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKEHRDH*PLLGCV
Trigger: CACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTC...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCAAAAAAGAAATACCTGTaGTTCAGGGATAATGGAAAC +
Preference number: 4 (lower is better)
Translates to: PRHSREKQWQIHVACIGAKKKYL*FRDNGN
Trigger: GTTTCCATTATCCCTGAAGCACAGGTATTTCTTTTT...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACGGTCTGCCTCCTCTATaGAGAAACAACAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDGLPPL*RNNRKG
Trigger: TCCCTTCCTGTTGTTTCTGCATAGAGGAGGCAGACC...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAAGTAAGAGTAGGAGACTaGAGTAGCCCACTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKVRVGD*SSPLSV
Trigger: TACTGAAAGTGGGCTACTGCAGTCTCCTACTCTTAC...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACATTAAGCGAGGATTGTaGTGGTCATCAAGAACCTTT +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYIKRGL*WSSRTF
Trigger: AAAGGTTCTTGATGACCACCACAATCCTCGCTTAAT...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATTGGCTGTCATTGCCCTaGGTTCACTTTCTATTCAAA +
Preference number: 4 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDWLSLP*VHFLFK
Trigger: TTTGAATAGAAAGTGAACCCAGGGCAATGACAGCCA...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTGGAAGGGATAAGGAGTaGGGCTTGAGTGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVGRDKE*GLSEDR
Trigger: TCTGTCTTCACTCAAGCCCCACTCCTTATCCCTTCC...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTATCCTCAGTGAACGCTaGTTATGGTCCAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVILSER*LWSKSQ
Trigger: CTGGCTCTTGGACCATAACCAGCGTTCACTGAGGAT...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGCCAGGGGCTGGTGGATaGGGAATAGGGAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKPGAGG*GIGSWC
Trigger: GCACCAACTCCCTATTCCCCATCCACCAGCCCCTGG...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTACACCTGATTGAAAAATaGACAAAGAGCCCAAATAGA +
Preference number: 4 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVHLIEK*TKSPNR
Trigger: TCTATTTGGGCTCTTTGTCCATTTTTCAATCAGGTG...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CAA 72 bp TGGAATCTCAAGAGACCTCACACAGCCAAAATCATCTaGAAAGGGAACCAAGTAGGAGGTCTCTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: WNLKRPHTAKII*KGNQVGGLSLP
Trigger: AGGAAGTGAGAGACCTCCTACTTGGTTCCCTTTCAAGATGATTTTGGCTGTGTGAGGTCTCTTGAGATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTCTTGCAGAAGATCTTTaGTTAAGCGAGGATTGTGGT +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVLAEDL*LSEDCG
Trigger: ACCACAATCCTCGCTTAATCAAAGATCTTCTGCAAG...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGACTGGAGATTCTATCTTaGGAGTGTCTGGCATTGCCT +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRLEILS*ECLALP
Trigger: AGGCAATGCCAGACACTCTCAAGATAGAATCTCCAG...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGACTGAGAGGAAGAAGTaGAACTGTCTATTCATAGAT +
Preference number: 4 (lower is better)
Translates to: SVWHCLSQERWASETYYLTERKK*NCLFID
Trigger: ATCTATGAATAGACAGTTTCACTTCTTCCTCTCAGT...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGTGAAACTTACTACCTGGCTTTAGGCTCCTGGGGTCCTGAATTATCTACTTCAAGCTTTCCCCTAAGATaGGGAACAAGACAAGGATGT +
Preference number: 4 (lower is better)
Translates to: SETYYLALGSWGPELSTSSFPLR*GTRQGC
Trigger: ACATCCTTGTCTTGTTCCTCATCTTAGGGGAAAGCT...TGAAGTAGATAATTCAGGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCAGCTTTCCCCTAAGATaGGGAACAAGACAAGGATGT +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSSFPLR*GTRQGC
Trigger: ACATCCTTGTCTTGTTCCTCATCTTAGGGGAAAGCT...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACGAAGGTTGCACAGTATaGATGTATTTAATGCCACTA +
Preference number: 4 (lower is better)
Translates to: ESVWHCLSQERWASETYYEGCTV*MYLMPL
Trigger: TAGTGGCATTAAATACATTCATACTGTGCAACCTTC...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCCATAGGATTGCCATATaGTTGAAAGCAGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFHRIAI*LKAETQ
Trigger: CTGAGTCTCTGCTTTCAATCATATGGCAATCCTATG...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATTGGAGAAAAAGCATTTaGGACAATGTCATGCCCTTT +
Preference number: 4 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDWRKSI*DNVMPF
Trigger: AAAGGGCATGACATTGTCTCAAATGCTTTTTCTCCA...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACAAGAGAATGCTGCAGTaGCGACAGAAATGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDKRMLQ*RQKCSV
Trigger: CACACTGCATTTCTGTCGGCACTGCAGCATTCTCTT...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTAAGAATGGCTGTCATTaGCCTGGGTTCACTTTCTAT +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVKNGCH*PGFTFY
Trigger: ATAGAAAGTGAACCCAGGGCAATGACAGCCATTCTT...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCTACGTTTCTATCCTATaGCTGCTGAGGGGATTTTTC +
Preference number: 4 (lower is better)
Translates to: SILLAVSVTSTKNVELTTYVSIL*LLRGFF
Trigger: GAAAAATCCCCTCAGCAGGCATAGGATAGAAACGTA...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTTACGTTTCTATCCTATaGCTGCTGAGGGGATTTTTC +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVYVSIL*LLRGFF
Trigger: GAAAAATCCCCTCAGCAGGCATAGGATAGAAACGTA...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAAAGTAGAAATGATTTaGTTGGGCTCCTTGACCCTA +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNKVEMI*LGSLTL
Trigger: TAGGGTCAAGGAGCCCAAGCAAATCATTTCTACTTT...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCTGTGGAAATATGCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATAAAAGTAGACACAGTTTaGTGTGTACAGCCCTGTACA +
Preference number: 4 (lower is better)
Translates to: ACGNMPAQQNSWNPTLLIKVDTV*CVQPCT
Trigger: TGTACAGGGCTGTACACAGCAAACTGTGTCTACTTT...TATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCCTAATCCCTTGGCTTTaGCATTGGGTAGCATTTGAT +
Preference number: 4 (lower is better)
Translates to: SILLAVSVTSTKNVELTTLIPWL*HWVAFD
Trigger: ATCAAATGCTACCCAATGGCAAAGCCAAGGGATTAG...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAGAACACACTGTCTCATaGTGTGAGCCAGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLREHTVS*CEPGLF
Trigger: AAAAAGCCCTGGCTCACAGCATGAGACAGTGTGTTC...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAAATTAAGCGAGGATTGTaGTGGTCATCAAGAACCTTT +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQIKRGL*WSSRTF
Trigger: AAAGGTTCTTGATGACCACCACAATCCTCGCTTAAT...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCTGTGGAAATATGCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGCTGTCATTGCCCTaGGTTCACTTTCTATTCAAA +
Preference number: 4 (lower is better)
Translates to: ACGNMPAQQNSWNPTLLIWLSLP*VHFLFK
Trigger: TTTGAATAGAAAGTGAACCCAGGGCAATGACAGCCA...TATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACTCCCTAAGACAAGAATaGCTGTCATTGCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDSLRQE*LSLPWV
Trigger: AACCCAGGGCAATGACAGCCATTCTTGTCTTAGGGA...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTTCCCTAAGACAAGAATaGCTGTCATTGCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVSLRQE*LSLPWV
Trigger: AACCCAGGGCAATGACAGCCATTCTTGTCTTAGGGA...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGACCACTGCCCGTTGTTaGGCTGCGTGTGCACACTTC +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKTTARC*AACAHF
Trigger: GAAGTGTGCACACGCAGCCCAACAACGGGCAGTGGT...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAAATGCACAATAATCTTTaGGTGGTGGGACTGATTTTC +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQMHNNL*VVGLIF
Trigger: GAAAATCAGTCCCACCACCCAAAGATTATTGTGCAT...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCTGTGTCCATGGCCTGTaGAAATATGCCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFCVHGL*KYASPA
Trigger: TGCTGGGCTGGCATATTTCCACAGGCCATGGACACA...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
CDS-3UTR CCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCTTAATCTCACAGGAGTaGCATCCCTACTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFLISQE*HPYFWK
Trigger: CTTCCAAAAGTAGGGATGCCACTCCTGTGAGATTAA...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCTGTGGAAATATGCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATAGCTTATCCTATGAGATaGACACCAAAACCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: ACGNMPAQQNSWNPTLLIAYPMR*TPKPKR
Trigger: TCTCTTGGGTTTTGGTGTCCATCTCATAGGATAAGC...TATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGACTGTTGCTAATCCCTTaGCTTTGCCATTGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRLLLIP*LCHWVA
Trigger: TGCTACCCAATGGCAAAGCCAAGGGATTAGCAACAG...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCAATACAGGCCAAAATTaGGCCCACCAGCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSNTGQN*AHQLFL
Trigger: CAAAAACAGCTGGTGGGCCCAATTTTGGCCTGTATT...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAATCACAGAAGTGGGGCTaGAAAATCCAGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKSQKWG*KIQNLF
Trigger: AAAAAGATTCTGGATTTTTCAGCCCCACTTCTGTGA...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTTCACAGAAGTGGGGCTaGAAAATCCAGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVSQKWG*KIQNLF
Trigger: AAAAAGATTCTGGATTTTTCAGCCCCACTTCTGTGA...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAAAAATCGGTCTGCTCCTaGGAGGCTACTGCATGGCTT +
Preference number: 4 (lower is better)
Translates to: STDEYTNKMWSIHRISLKKSVCS*EATAWL
Trigger: AAGCCATGCAGTAGCCTCTCAGGAGCAGACCGATTT...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTGGATTGCCATATGATTaGAAGCAGAGACTCAGATAT +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVGLPYD*KQRLRY
Trigger: ATATCTGAGTCTCTGCTTTCAATCATATGGCAATCC...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTCATTGGATTTGGCAGTaGTTTCTTAGATATGACACC +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVHWIWQ*FLRYDT
Trigger: GGTGTCATATCTAAGAAATCACTGCCAAATCCAATG...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGTGAAACTTACTACCTGGCTTTAGGCTCCTGGGGTCCTGAATTATCTACTTCAGATTCAGTGGGACATTaGAAGGATTACACATCATGG +
Preference number: 4 (lower is better)
Translates to: SETYYLALGSWGPELSTSDSVGH*KDYTSW
Trigger: CCATGATGTGTAATCCTTTCAATGTCCCACTGAATC...TGAAGTAGATAATTCAGGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATGTAGAGCTTAGGTCTTaGAGAAGATCTTTGATTAAG +
Preference number: 4 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNVELRS*RRSLIK
Trigger: CTTAATCAAAGATCTTCTGCAAGACCTAAGCTCTAC...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTTCCAAAAGAGAATGCTaGAGTGCCGACAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVSKREC*SADRNA
Trigger: TGCATTTCTGTCGGCACTGCAGCATTCTCTTTTGGA...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAAATACTCTTTTCAGCATaGACAATAATCTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQILFSA*TIIFGW
Trigger: CCACCCAAAGATTATTGTGCATGCTGAAAAGAGTAT...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTAAAGTAGAAATGATTTaGTTGGGCTCCTTGACCCTA +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVKVEMI*LGSLTL
Trigger: TAGGGTCAAGGAGCCCAAGCAAATCATTTCTACTTT...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAGTGGTGTCCATCACGTaGACACATCATAATGAAGAG +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRVVSIT*THHNEE
Trigger: CTCTTCATTATGATGTGTGCACGTGATGGACACCAC...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTGTGGTGTCCATCACGTaGACACATCATAATGAAGAG +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVVVSIT*THHNEE
Trigger: CTCTTCATTATGATGTGTGCACGTGATGGACACCAC...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AGTGAAACTTACTACCTGGCTTTAGGCTCCTGGGGTCCTGAATTATCTACTTCACTGGTTAGTCATGTATaGAGGTCCTTCTTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SETYYLALGSWGPELSTSLVSHV*RSFFFL
Trigger: GAGGAAAAAGAAGGACCTGCATACATGACTAACCAG...TGAAGTAGATAATTCAGGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCGCAGCAGCCATACACTaGCTGAGTTTAGAGAGGACT +
Preference number: 4 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFAAAIH*LSLERT
Trigger: AGTCCTCTCTAAACTCAGGCAGTGTATGGCTGCTGC...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACGGGAATGTAAAATGGTaGAGCCACCGTGTAAAACAC +
Preference number: 4 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDGNVKW*SHRVKH
Trigger: GTGTTTTACACGGTGGCTGCACCATTTTACATTCCC...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAAGATTTACAGCTGGTATaGAAAGATGTTTCAACATGC +
Preference number: 4 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQDLQLV*KDVSTC
Trigger: GCATGTTGAAACATCTTTGCATACCAGCTGTAAATC...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAACAATCTTTACCATCTaGTCCAAGCCCTGCTTCACT +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRTIFTI*SKPCFT
Trigger: AGTGAAGCAGGGCTTGGAGCAGATGGTAAAGATTGT...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGTCCCTAAGACAAGAATaGCTGTCATTGCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKSLRQE*LSLPWV
Trigger: AACCCAGGGCAATGACAGCCATTCTTGTCTTAGGGA...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AGTGAAACTTACTACCTGGCTTTAGGCTCCTGGGGTCCTGAATTATCTACTTCATTAATCTCACAGGAGTaGCATCCCTACTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SETYYLALGSWGPELSTSLISQE*HPYFWK
Trigger: CTTCCAAAAGTAGGGATGCCACTCCTGTGAGATTAA...TGAAGTAGATAATTCAGGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCCATATGAGTGCAGGGTaGATGCTGGTGTCAGCCATA +
Preference number: 4 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFHMSAG*MLVSAI
Trigger: TATGGCTGACACCAGCATCCACCCTGCACTCATATG...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTACAATAGCTAAAAGGTaGAAGCAACTCAAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVTIAKR*KQLKCP
Trigger: AGGACACTTGAGTTGCTTCCACCTTTTAGCTATTGT...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACAGGATGTGGCAAAACTaGAACCTTCAGTGGGAATGT +
Preference number: 4 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDRMWQN*NLQWEC
Trigger: ACATTCCCACTGAAGGTTCCAGTTTTGCCACATCCT...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTTATTCAACAAAATACTaGCCAACAGGATTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVYSTKY*PTGFSG
Trigger: CCCACTGAATCCTGTTGGCCAGTATTTTGTTGAATA...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTATTGTCCAAAAAGTTTaGAACACAGCCACATGCACT +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVIVQKV*NTATCT
Trigger: AGTGCATGTGGCTGTGTTCCAAACTTTTTGGACAAT...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGCGTGCAGGGGTGTCCTaGGTCCTTCCAAAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKRAGVS*VLPKEN
Trigger: ATTCTCTTTTGGAAGGACTCAGGACACCCCTGCACG...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
CDS-3UTR TCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCGCCTTAAAATATGTTTaGCTCATGATGTTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFALKYV*LMMLAV
Trigger: TACAGCCAACATCATGAGTCAAACATATTTTAAGGC...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCCTGTCTATTCATAGATaGCATGATTTTGTACACAGC +
Preference number: 4 (lower is better)
Translates to: SILLAVSVTSTKNVELTTLSIHR*HDFVHS
Trigger: GCTGTGTACAAAATCATGTCATCTATGAATAGACAG...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGATCTAAGCTTATCCTATaGGATGGACACCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRSKLIL*DGHQNP
Trigger: TGGGTTTTGGTGTCCATCTCATAGGATAAGCTTAGA...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAACTGTTGAGATACATATaGGTGCAGGGTGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: STDEYTNKMWSIHRISLKLLRYI*VQGGCW
Trigger: CCAGCATCCACCCTGCACTCATATGTATCTCAACAG...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGGGAGTGGGGCTTGAGTaGAGACAGAAGCAGCAATTC +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKGVGLE*RQKQQF
Trigger: GAATTGCTGCTTCTGTCTTCACTCAAGCCCCACTCC...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACCATAGGATTGCCATATaGTTGAAAGCAGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDHRIAI*LKAETQ
Trigger: CTGAGTCTCTGCTTTCAATCATATGGCAATCCTATG...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAAAACACACACCTGATTaGAAAATGGACAAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRKHTPD*KMDKEP
Trigger: GGGCTCTTTGTCCATTTTTCAATCAGGTGTGTGTTT...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTGGGTCAAATGATTTTTaGTGGTGCCAAGACCATTCA +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVGSNDF*WCQDHS
Trigger: TGAATGGTCTTGGCACCATCAAAAATCATTTGACCC...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTTCCAAATGCATTCTATaGGGCCATCATTATTCTGAT +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVSKCIL*GHHYSD
Trigger: ATCAGAATAATGATGGCCTCATAGAATGCATTTGGA...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGCAGTGCCGACAGAAATaGAGTGTGTCTCCGTACTGC +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKQCRQK*SVSPYC
Trigger: GCAGTACGGAGACACACTGCATTTCTGTCGGCACTG...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCATACTCTTTTCAGCATaGACAATAATCTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SILLAVSVTSTKNVELTTILFSA*TIIFGW
Trigger: CCACCCAAAGATTATTGTGCATGCTGAAAAGAGTAT...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp ATAGAAGGGAACCTCCCCAACCTAATAGAGGGTATGTATGGAAAACCCAGGGTTATACTCTTTTCAGCATaGACAATAATCTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: IEGNLPNLIEGMYGKPRVILFSA*TIIFGW
Trigger: CCACCCAAAGATTATTGTGCATGCTGAAAAGAGTAT...AACCCTGGGTTTTCCATACATACCCTCTATTAGGTTGGGGAGGTTCCCTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAAAAGTAGACACAGTTTaGTGTGTACAGCCCTGTACA +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRKVDTV*CVQPCT
Trigger: TGTACAGGGCTGTACACAGCAAACTGTGTCTACTTT...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGCTAAAGGGAGGTGAGTaGTGTCCATCACGTGCACAC +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKLKGGE*CPSRAH
Trigger: GTGTGCACGTGATGGACACCACTCACCTCCCTTTAG...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCTGGGGAATAGGGAGTTaGTGCTTAATGGGTACAGAG +
Preference number: 4 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFWGIGS*CLMGTE
Trigger: CTCTGTACCCATTAAGCACCAACTCCCTATTCCCCA...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCCGTGTAAAACACTTATaGCAGTGCCCTAAGAAATTA +
Preference number: 4 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFRVKHL*QCPKKL
Trigger: TAATTTCTTAGGGCACTGCCATAAGTGTTTTACACG...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGGATTTCCTTGGCCTCTaGCTTTCAGTGATGAAAATG +
Preference number: 4 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKDFLGL*LSVMKM
Trigger: CATTTTCATCACTGAAAGTCAGAGGCCAAGGAAATC...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACCAAAGAATGTGGAGCTaGCCACCTAAAGTATTTTTG +
Preference number: 4 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDQRMWS*PPKVFL
Trigger: CAAAAATACTTTAGGTGGTCAGCTCCACATTCTTTG...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCCTGTCTATTCATAGATaGCATGATTTTGTACACAGC +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSLSIHR*HDFVHS
Trigger: GCTGTGTACAAAATCATGTCATCTATGAATAGACAG...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGATAAGGAGTGGGGCTTaGGTGAAGACAGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKIRSGA*VKTEAA
Trigger: TGCTGCTTCTGTCTTCACTCAAGCCCCACTCCTTAT...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACGGTGTCTCTTCTATTTaGCACAGATGTCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDGVSSI*HRCPHF
Trigger: AAAATGAGGACATCTGTGTCAAATAGAAGAGACACC...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCGTAGAGCTTAGGTCTTaGAGAAGATCTTTGATTAAG +
Preference number: 4 (lower is better)
Translates to: ASPAEQLESYTINMVMFSVELRS*RRSLIK
Trigger: CTTAATCAAAGATCTTCTGCAAGACCTAAGCTCTAC...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCTCCAAAAGAGAATGCTaGAGTGCCGACAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFSKREC*SADRNA
Trigger: TGCATTTCTGTCGGCACTGCAGCATTCTCTTTTGGA...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGAAAAGTAGAAATGATTTaGTTGGGCTCCTTGACCCTA +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRKVEMI*LGSLTL
Trigger: TAGGGTCAAGGAGCCCAAGCAAATCATTTCTACTTT...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GCCTGTGGAAATATGCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATAAAAAAGAAATACCTGTaGTTCAGGGATAATGGAAAC +
Preference number: 4 (lower is better)
Translates to: ACGNMPAQQNSWNPTLLIKKKYL*FRDNGN
Trigger: GTTTCCATTATCCCTGAAGCACAGGTATTTCTTTTT...TATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
CDS-3UTR CCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGCTTTTCTGGCCACAGTaGGATGAAACTAGAAATCAG +
Preference number: 4 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKLFWPQ*DETRNQ
Trigger: CTGATTTCTAGTTTCATCCCACTGTGGCCAGAAAAG...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCAATACAGGCCAAAATTaGGCCCACCAGCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFNTGQN*AHQLFL
Trigger: CAAAAACAGCTGGTGGGCCCAATTTTGGCCTGTATT...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGAATATGTTTGACTCATaGTGTTGGCTGTACTACCAG +
Preference number: 4 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKNMFDS*CWLYYQ
Trigger: CTGGTAGTACAGCCAACATCATGAGTCAAACATATT...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATAGGACATTACGCTAAGTaGAATAAGCCAGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: MIESRDSDICTPMFTAAIGHYAK*NKPVTK
Trigger: TTTTGTGACTGGCTTATTTCACTTAGCGTAATGTCC...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGATCCAAATGCATTCTATaGGGCCATCATTATTCTGAT +
Preference number: 4 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRSKCIL*GHHYSD
Trigger: ATCAGAATAATGATGGCCTCATAGAATGCATTTGGA...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR GCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTGTAGAGCTTAGGTCTTaGAGAAGATCTTTGATTAAG +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVVELRS*RRSLIK
Trigger: CTTAATCAAAGATCTTCTGCAAGACCTAAGCTCTAC...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR GCA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTGATTTACAGCTGGTATaGAAAGATGTTTCAACATGC +
Preference number: 4 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVDLQLV*KDVSTC
Trigger: GCATGTTGAAACATCTTTGCATACCAGCTGTAAATC...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGGTACTGCTCCTTCGCTaGGTAATGTTTCTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKVLLLR*VMFLKC
Trigger: GCACTTCAGAAACATTACCCAGCGAAGGAGCAGTAC...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CCA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATAATGCACAATAATCTTTaGGTGGTGGGACTGATTTTC +
Preference number: 4 (lower is better)
Translates to: MIESRDSDICTPMFTAAIMHNNL*VVGLIF
Trigger: GAAAATCAGTCCCACCACCCAAAGATTATTGTGCAT...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGACAATAGCTAAAAGGTaGAAGCAACTCAAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKTIAKR*KQLKCP
Trigger: AGGACACTTGAGTTGCTTCCACCTTTTAGCTATTGT...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACCGTGTAAAACACTTATaGCAGTGCCCTAAGAAATTA +
Preference number: 4 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDRVKHL*QCPKKL
Trigger: TAATTTCTTAGGGCACTGCCATAAGTGTTTTACACG...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCGCCAACAGGATTCAGTaGGACATTGAAAGGATTACA +
Preference number: 4 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFANRIQ*DIERIT
Trigger: TGTAATCCTTTCAATGTCCCACTGAATCCTGTTGGC...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AGTGAAACTTACTACCTGGCTTTAGGCTCCTGGGGTCCTGAATTATCTACTTCAATAAAATATCTTTTCTaGCCACAGTGGGATGAAACT +
Preference number: 4 (lower is better)
Translates to: SETYYLALGSWGPELSTSIKYLF*PQWDET
Trigger: AGTTTCATCCCACTGTGGCCAGAAAAGATATTTTAT...TGAAGTAGATAATTCAGGACCCCAGGAGCCTAAAGCCAGGTAGTAAGTTTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCCACATATGGGTCAAATaGTTTTTGATGGTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFHIWVK*FLMVPR
Trigger: TCTTGGCACCATCAAAAATCATTTGACCCATATGTG...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAACTTCTCATCTCTGTTTaGTGTTGTCCGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: STDEYTNKMWSIHRISLKLLISV*CCPIFC
Trigger: ACAGAAGATCGGACAACACCAAACAGAGATGAGAAG...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGCATCTCTGGAGAAAATaGTCTTATCCTCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKHLWRK*SYPLKG
Trigger: TCCTTTAAGAGGATAAGACCATTTTCTCCAGAGATG...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CAA 72 bp GAAAAACTAACATATATTCGCAGAGGCCCCAGGTATTaGCATCGCCTCAGGAGAAACTATAATTTGACAAAT +
Preference number: 4 (lower is better)
Translates to: EKLTYIRRGPRY*HRLRRNYNLTN
Trigger: ATTTGTCAAATTATAGTTTCTCCTGAGGCGATGCAAATACCTGGGGCCTCTGCGAATATATGTTAGTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGCTTGCAGAAGATCTTTaGTTAAGCGAGGATTGTGGT +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKLAEDL*LSEDCG
Trigger: ACCACAATCCTCGCTTAATCAAAGATCTTCTGCAAG...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAACAAAGAATGTGGAGCTaGCCACCTAAAGTATTTTTG +
Preference number: 4 (lower is better)
Translates to: STDEYTNKMWSIHRISLKQRMWS*PPKVFL
Trigger: CAAAAATACTTTAGGTGGTCAGCTCCACATTCTTTG...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAAGGATTGCCATATGATTaGAAGCAGAGACTCAGATAT +
Preference number: 4 (lower is better)
Translates to: STDEYTNKMWSIHRISLKGLPYD*KQRLRY
Trigger: ATATCTGAGTCTCTGCTTTCAATCATATGGCAATCC...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAACACATATGGGTCAAATaGTTTTTGATGGTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: STDEYTNKMWSIHRISLKHIWVK*FLMVPR
Trigger: TCTTGGCACCATCAAAAATCATTTGACCCATATGTG...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGCTTCTCATCTCTGTTTaGTGTTGTCCGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKLLISV*CCPIFC
Trigger: ACAGAAGATCGGACAACACCAAACAGAGATGAGAAG...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGAGGTCCGAGAATGACTaGAGATTCTATCTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKRSEND*RFYLES
Trigger: ACTCTCAAGATAGAATCTCCAGTCATTCTCGGACCT...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGGCCAACAGGATTCAGTaGGACATTGAAAGGATTACA +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKANRIQ*DIERIT
Trigger: TGTAATCCTTTCAATGTCCCACTGAATCCTGTTGGC...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CAA 72 bp CAGTTTTACAAGATGACAAAAGTTCATCTTGTAAAGTaGAACTTGTGGATACGTGGTAGAGAAGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: QFYKMTKVHLVK*NLWIRGREGCT
Trigger: TGTGCAACCTTCTCTACCACGTATCCACAAGTTCAACTTTACAAGATGAACTTTTGTCATCTTGTAAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGCAAAGAATGTGGAGCTaGCCACCTAAAGTATTTTTG +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKQRMWS*PPKVFL
Trigger: CAAAAATACTTTAGGTGGTCAGCTCCACATTCTTTG...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR TCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGGGACATTACGCTAAGTaGAATAAGCCAGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKGHYAK*NKPVTK
Trigger: TTTTGTGACTGGCTTATTTCACTTAGCGTAATGTCC...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR TCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGCAGCACATGATCTTATaGAGGCCAAAAACTACATTA +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKQHMIL*RPKTTL
Trigger: TAATGTAGTTTTTGGCCTTCATAAGATCATGTGCTG...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGCATCTCTGGAGAAAATaGTCTTATCCTCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKHLWRK*SYPLKG
Trigger: TCCTTTAAGAGGATAAGACCATTTTCTCCAGAGATG...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CCA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGCACCTGATTGAAAAATaGACAAAGAGCCCAAATAGA +
Preference number: 4 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKHLIEK*TKSPNR
Trigger: TCTATTTGGGCTCTTTGTCCATTTTTCAATCAGGTG...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
3UTR CAA 72 bp TTTATTACTTTGTCTATTAAAGTAGTTTCAACACAATaGAAGTTTAGACTGCACTGGGCTGTTCCCATCACA +
Preference number: 4 (lower is better)
Translates to: FITLSIKVVSTQ*KFRLHWAVPIT
Trigger: TGTGATGGGAACAGCCCAGTGCAGTCTAAACTTCAATTGTGTTGAAACTACTTTAATAGACAAAGTAATAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCAAGGTGGGAGGATCACTaGAGCCTGGGGGACAGAGGT +
Preference number: 5 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPRWEDH*SLGDRG
Trigger: ACCTCTGTCCCCCAGGCTCAAGTGATCCTCCCACCT...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS GCA 90 bp CTTAGGAGGAACGCAGGTAAACGGGACCAGAGGCTCTGGGGTCAGTaGTGGATCTCTCCATGGCATGCCCTGGCAGTGCTGCCAAACCAG +
Preference number: 5 (lower is better)
Translates to: LRRNAGKRDQRLWGQ*WISPWHALAVLPNQ
Trigger: CTGGTTTGGCAGCACTGCCAGGGCATGCCATGGAGAGATCCAGCACTGACCCCAGAGCCTCTGGTCCCGTTTACCTGCGTTCCTCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517464.1
CDS-3UTR CAA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCGACCACTGCCCGTTGTaGGGCTGCGTGTGCACACTT +
Preference number: 5 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAADHCPL*GCVCTL
Trigger: AAGTGTGCACACGCAGCCCAACAACGGGCAGTGGTC...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACCTGAGGGTGAGGCCATaGTTCACTTGCTTAGTCATC +
Preference number: 5 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHLRVRP*FTCLVI
Trigger: GATGACTAAGCAAGTGAACAATGGCCTCACCCTCAG...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCAGAGGCCCCAGGTATTaGCATCGCCTCAGGAGAAAC +
Preference number: 5 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAARGPRY*HRLRRN
Trigger: GTTTCTCCTGAGGCGATGCAAATACCTGGGGCCTCT...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS GCA 90 bp GAGCTGGAATCGAGCCGGGCAGTGGCCAAGATGACGTGCATGAGATaGAGCACGATGCAACGTTTTCATCCCGAACACAGGATGTGTGGC +
Preference number: 5 (lower is better)
Translates to: ELESSRAVAKMTCMR*STMQRFHPEHRMCG
Trigger: GCCACACATCCTGTGTTCGGGATGAAAACGTTGCATCGTGCTGCATCTCATGCACGTCATCTTGGCCACTGCCCGGCTCGATTCCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517464.1
CDS GCA 90 bp AGTCAGCGAGAGCTGGAATCGAGCCGGGCAGTGGCCAAGATGACGTaGATGAGATGCAGCACGATGCAACGTTTTCATCCCGAACACAGG +
Preference number: 5 (lower is better)
Translates to: SQRELESSRAVAKMT*MRCSTMQRFHPEHR
Trigger: CCTGTGTTCGGGATGAAAACGTTGCATCGTGCTGCATCTCATGCACGTCATCTTGGCCACTGCCCGGCTCGATTCCAGCTCTCGCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517464.1
CDS-3UTR CAA 90 bp CCTAGGCATTCACGTGAAAAGCAATGGCAGATCCACGTGGCCTGTATTGGGGCAGACCACTGCCCGTTGTaGGGCTGCGTGTGCACACTT +
Preference number: 5 (lower is better)
Translates to: PRHSREKQWQIHVACIGADHCPL*GCVCTL
Trigger: AAGTGTGCACACGCAGCCCAACAACGGGCAGTGGTC...TGCCCCAATACAGGCCACGTGGATCTGCCATTGCTTTTCACGTGAATGCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACAAGGAGACGGCCACATaGTTGTGTGACGATGCTTAT +
Preference number: 5 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHKETAT*LCDDAY
Trigger: ATAAGCATCGTCACACAACAATGTGGCCGTCTCCTT...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCAATGGGGAATAGGGAGTaGGTGCTTAATGGGTACAGA +
Preference number: 5 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPMGNRE*VLNGYR
Trigger: TCTGTACCCATTAAGCACCAACTCCCTATTCCCCAT...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACATGGGGAATAGGGAGTaGGTGCTTAATGGGTACAGA +
Preference number: 5 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHMGNRE*VLNGYR
Trigger: TCTGTACCCATTAAGCACCAACTCCCTATTCCCCAT...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTAACCGGTATAGGATGTaGTTCAGCATGTGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTNRYRM*FSMCRG
Trigger: TCCTCTGCACATGCTGAACAACATCCTATACCGGTT...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCATCAAAGAGGACTCATTaGGGCACAGCCAATGTAGTA +
Preference number: 5 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPSKRTH*GTANVV
Trigger: TACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGA...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAACCCAGCTCCCACAGCTaGTCCCTCGAACGCACCTGC +
Preference number: 5 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQPSSHS*SLERTC
Trigger: GCAGGTGCGTTCGAGGGACAAGCTGTGGGAGCTGGG...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATTCCACGTGGCCTGTATaGGGGCAGGTGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDSTWPV*GQVPWG
Trigger: TCCCCAGGGCACCTGCCCCAATACAGGCCACGTGGA...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATTCCACGTGGCCTGTATaGGGGCAGGTGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNSTWPV*GQVPWG
Trigger: TCCCCAGGGCACCTGCCCCAATACAGGCCACGTGGA...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACCAAGAATGGCTGTCATaGCCCTGGGTTCACTTTCTA +
Preference number: 5 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHQEWLS*PWVHFL
Trigger: TAGAAAGTGAACCCAGGGCAATGACAGCCATTCTTG...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACATTTGCTTGGGCTCCTaGACCCTATTCAAAAATGGA +
Preference number: 5 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHICLGS*TLFKNG
Trigger: TCCATTTTTGAATAGGGTCAAGGAGCCCAAGCAAAT...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTGTAGAAATGATTTGCTaGGGCTCCTTGACCCTATTC +
Preference number: 5 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTVEMIC*GSLTLF
Trigger: GAATAGGGTCAAGGAGCCCAAGCAAATCATTTCTAC...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCTTTTCCTCCTACCTGTaGCTAATCCCTTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAAFSSYL*LIPWLC
Trigger: GCAAAGCCAAGGGATTAGCAACAGGTAGGAGGAAAA...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACTTTTCCTCCTACCTGTaGCTAATCCCTTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHFSSYL*LIPWLC
Trigger: GCAAAGCCAAGGGATTAGCAACAGGTAGGAGGAAAA...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACGGATTCAGTGGGACATaGAAAGGATTACACATCATG +
Preference number: 5 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHGFSGT*KGLHIM
Trigger: CATGATGTGTAATCCTTTCAATGTCCCACTGAATCC...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAAGACCACTGCCCGTTGTaGGGCTGCGTGTGCACACTT +
Preference number: 5 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQDHCPL*GCVCTL
Trigger: AAGTGTGCACACGCAGCCCAACAACGGGCAGTGGTC...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAAAGAGACCACTGCCCGTaGTTGGGCTGCGTGTGCACA +
Preference number: 5 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQRDHCP*LGCVCT
Trigger: TGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCT...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGAGACCACTGCCCGTaGTTGGGCTGCGTGTGCACA +
Preference number: 5 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNRDHCP*LGCVCT
Trigger: TGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCT...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTGGATTCAGTGGGACATaGAAAGGATTACACATCATG +
Preference number: 5 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTGFSGT*KGLHIM
Trigger: CATGATGTGTAATCCTTTCAATGTCCCACTGAATCC...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS CCA 90 bp CACAGCTGTCTGTCTTCACTAAGCATATACAACGTGGGGGTCACCTaGCCTAAGGTGATGATGTCCCATCCGTCTGAGAACCGGTATAGG +
Preference number: 5 (lower is better)
Translates to: HSCLSSLSIYNVGVT*PKVMMSHPSENRYR
Trigger: CCTATACCGGTTCTCAGACGGATGGGACATCATCACCTTAGGCCAGGTGACCCCCACGTTGTATATGCTTAGTGAAGACAGACAGCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
ENST00000519376.5
CDS-3UTR CAA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTTTAAGAAGCATATTATaGGCCGTTAGTGTCACGTCA +
Preference number: 5 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTLRSIL*AVSVTS
Trigger: TGACGTGACACTAACGGCCAATAATATGCTTCTTAA...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACACTGTAGTTTCAACACAATaGAAGTTTAGACTGCACTGG +
Preference number: 5 (lower is better)
Translates to: GCLGAQRPLPVVGLRVHTVVSTQ*KFRLHW
Trigger: CCAGTGCAGTCTAAACTTCAATTGTGTTGAAACTAC...AGTGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCAAAAGTAGAAATGATTaGCTTGGGCTCCTTGACCCT +
Preference number: 5 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAAKSRND*LGLLDP
Trigger: AGGGTCAAGGAGCCCAAGCAAATCATTTCTACTTTT...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GCTGGATGCCTAGGAGCACAGAGACCACTGCCCGTTGTTGGGCTGCGTGTGCACCAAATAAATGCATTCTaGGCCATTTGTGTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: AGCLGAQRPLPVVGLRVHQINAF*AICVSS
Trigger: TGAACTGACACAAATGGCCAAGAATGCATTTATTTG...GTGCACACGCAGCCCAACAACGGGCAGTGGTCTCTGTGCTCCTAGGCATCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp CAGCAGGGGTGCCCTGCCAGAACCTGTGCTGGATGCCTAGGAGCACAGAGACCACAAATAAATGCATTCTaGGCCATTTGTGTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: QQGCPARTCAGCLGAQRPQINAF*AICVSS
Trigger: TGAACTGACACAAATGGCCAAGAATGCATTTATTTG...TGGTCTCTGTGCTCCTAGGCATCCAGCACAGGTTCTGGCAGGGCACCCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGGCTGAGGCAGGTGGATaGCTTGAGCTCAAACTCCTG +
Preference number: 5 (lower is better)
Translates to: SVWHCLSQERWASETYYLAEAGG*LELKLL
Trigger: CAGGAGTTTGAGCTCAAGCAATCCACCTGCCTCAGC...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGACCCAGCTCCCACAGCTaGTCCCTCGAACGCACCTGC +
Preference number: 5 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRPSSHS*SLERTC
Trigger: GCAGGTGCGTTCGAGGGACAAGCTGTGGGAGCTGGG...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACACAGCCAAAATCATCTaGAAAGGGAACCAAGTAGGA +
Preference number: 5 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHTAKII*KGNQVG
Trigger: TCCTACTTGGTTCCCTTTCAAGATGATTTTGGCTGT...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp GCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGGCAGGGGCAGCCTTAAGAAGCATATTATaGGCCGTTAGTGTCACGTCA +
Preference number: 5 (lower is better)
Translates to: ALHRQQDSQSPIGMAGAALRSIL*AVSVTS
Trigger: TGACGTGACACTAACGGCCAATAATATGCTTCTTAA...GGCTGCCCCTGCCATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp AGGCTTTCTGGAAGCAGGGGCTTCCGAGGAGTCTCCACCCACCTCACAGAACACGTAGTTTCAACACAATaGAAGTTTAGACTGCACTGG +
Preference number: 5 (lower is better)
Translates to: RLSGSRGFRGVSTHLTEHVVSTQ*KFRLHW
Trigger: CCAGTGCAGTCTAAACTTCAATTGTGTTGAAACTAC...GTGTTCTGTGAGGTGGGTGGAGACTCCTCGGAAGCCCCTGCTTCCAGAAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATAGAGGCCCCAGGTATTaGCATCGCCTCAGGAGAAAC +
Preference number: 5 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDRGPRY*HRLRRN
Trigger: GTTTCTCCTGAGGCGATGCAAATACCTGGGGCCTCT...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGCTGAGGCAGGTGGATaGCTTGAGCTCAAACTCCTG +
Preference number: 5 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDAEAGG*LELKLL
Trigger: CAGGAGTTTGAGCTCAAGCAATCCACCTGCCTCAGC...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350302.8
ENST00000382824.5
ENST00000519274.1
CDS-3UTR CAA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTATCCGCGTGGCAATGTaGCTGCCTGGTCCTGTCGCC +
Preference number: 5 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVIRVAM*LPGPVA
Trigger: GGCGACAGGACCAGGCAGCAACATTGCCACGCGGAT...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352684.2
CDS-3UTR CAA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACAGAGACCACTGCCCGTaGTTGGGCTGCGTGTGCACA +
Preference number: 5 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDRDHCP*LGCVCT
Trigger: TGTGCACACGCAGCCCAACAACGGGCAGTGGTCTCT...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAACCGGTATAGGATGTaGTTCAGCATGTGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNNRYRM*FSMCRG
Trigger: TCCTCTGCACATGCTGAACAACATCCTATACCGGTT...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTTTAAGAAGCATATTATaGGCCGTTAGTGTCACGTCA +
Preference number: 5 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSLRSIL*AVSVTS
Trigger: TGACGTGACACTAACGGCCAATAATATGCTTCTTAA...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAACAAGAATGGCTGTCATaGCCCTGGGTTCACTTTCTA +
Preference number: 5 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQQEWLS*PWVHFL
Trigger: TAGAAAGTGAACCCAGGGCAATGACAGCCATTCTTG...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAAAAGGAGACGGCCACATaGTTGTGTGACGATGCTTAT +
Preference number: 5 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQKETAT*LCDDAY
Trigger: ATAAGCATCGTCACACAACAATGTGGCCGTCTCCTT...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCAGGTGGGAGGATCACTaGAGCCTGGGGGACAGAGGT +
Preference number: 5 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFRWEDH*SLGDRG
Trigger: ACCTCTGTCCCCCAGGCTCAAGTGATCCTCCCACCT...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp TGCTGTGTACAGCCCTGTACAGTACGCACACACAGTGCATACAGAGAGCCTGTAACAGCCAAAATCATCTaGAAAGGGAACCAAGTAGGA +
Preference number: 5 (lower is better)
Translates to: CCVQPCTVRTHSAYREPVTAKII*KGNQVG
Trigger: TCCTACTTGGTTCCCTTTCAAGATGATTTTGGCTGT...TACAGGCTCTCTGTATGCACTGTGTGTGCGTACTGTACAGGGCTGTACACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATGTCGCAAGACAGAACTaGAACAGCATCATACCAGCT +
Preference number: 5 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDVARQN*NSIIPA
Trigger: AGCTGGTATGATGCTGTTCAAGTTCTGTCTTGCGAC...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATGGGTGTCCTGAGTCCTaGAATAGTAAAGCAAGATGG +
Preference number: 5 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNGCPES*NSKARW
Trigger: CCATCTTGCTTTACTATTCAAGGACTCAGGACACCC...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382824.5
CDS CCA 90 bp GCAGTGCCGACAGAAATGCAGTGTGTCTCCGTACTGCTCCTTCGCTaGGTAATGTTTCTGAAGTGCAAAGTACATCAACTTCCATTCAAT +
Preference number: 5 (lower is better)
Translates to: AVPTEMQCVSVLLLR*VMFLKCKVHQLPFN
Trigger: ATTGAATGGAAGTTGATGTACTTTGCACTTCAGAAACATTACCCAGCGAAGGAGCAGTACGGAGACACACTGCATTTCTGTCGGCACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
ENST00000517464.1
ENST00000519376.5
CDS-3UTR CAA 90 bp ACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAGGGATTTGATTAAGCGAGGATaGTGGTGGTCATCAAGAACC +
Preference number: 5 (lower is better)
Translates to: TLTMSPAQTAGFTISNRDLIKRG*WWSSRT
Trigger: GGTTCTTGATGACCACCACAATCCTCGCTTAATCAA...ATCCCTATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp TCACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATCAAAGAGGACTCATTaGGGCACAGCCAATGTAGTA +
Preference number: 5 (lower is better)
Translates to: SQNTHYEPCTDSRIHNLQSKRTH*GTANVV
Trigger: TACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGA...TTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATGTAGAAATGATTTGCTaGGGCTCCTTGACCCTATTC +
Preference number: 5 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNVEMIC*GSLTLF
Trigger: GAATAGGGTCAAGGAGCCCAAGCAAATCATTTCTAC...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATAGCTGAGGCAGGTGGATaGCTTGAGCTCAAACTCCTG +
Preference number: 5 (lower is better)
Translates to: MIESRDSDICTPMFTAAIAEAGG*LELKLL
Trigger: CAGGAGTTTGAGCTCAAGCAATCCACCTGCCTCAGC...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTCCTGTTGCTAATCCCTaGGCTTTGCCATTGGGTAGC +
Preference number: 5 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVPVANP*ALPLGS
Trigger: GCTACCCAATGGCAAAGCCAAGGGATTAGCAACAGG...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGGCAAAAACGAGACAGTaGAGGTGTCTCTTCTATTTG +
Preference number: 5 (lower is better)
Translates to: SVWHCLSQERWASETYYLAKTRQ*RCLFYL
Trigger: CAAATAGAAGAGACACCTCAACTGTCTCGTTTTTGC...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp TGCCACTACTGCCAAGTGGCAAGAGAGCCCCATGGCTGGAAAAGCCAACAATCTCACAGCCTATCAAGATaGAATCATGAAGAAATGGAA +
Preference number: 5 (lower is better)
Translates to: CHYCQVAREPHGWKSQQSHSLSR*NHEEME
Trigger: TTCCATTTCTTCATGATTCAATCTTGATAGGCTGTG...AGATTGTTGGCTTTTCCAGCCATGGGGCTCTCTTGCCACTTGGCAGTAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGTATTGTCCAAAAAGTTaGGAACACAGCCACATGCAC +
Preference number: 5 (lower is better)
Translates to: SVWHCLSQERWASETYYLYCPKS*EHSHMH
Trigger: GTGCATGTGGCTGTGTTCCAAACTTTTTGGACAATA...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCTTGATTAAGCGAGGATaGTGGTGGTCATCAAGAACC +
Preference number: 5 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFLIKRG*WWSSRT
Trigger: GGTTCTTGATGACCACCACAATCCTCGCTTAATCAA...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATTCTTGCAGAAGATCTTaGATTAAGCGAGGATTGTGG +
Preference number: 5 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNSCRRS*IKRGLW
Trigger: CCACAATCCTCGCTTAATCAAAGATCTTCTGCAAGA...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTCTGAGGGTGAGGCCATaGTTCACTTGCTTAGTCATC +
Preference number: 5 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVLRVRP*FTCLVI
Trigger: GATGACTAAGCAAGTGAACAATGGCCTCACCCTCAG...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GAGAGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACTTAAGAAGCATATTATaGGCCGTTAGTGTCACGTCA +
Preference number: 5 (lower is better)
Translates to: ESVWHCLSQERWASETYYLRSIL*AVSVTS
Trigger: TGACGTGACACTAACGGCCAATAATATGCTTCTTAA...GTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCTCAAAGAGGACTCATTaGGGCACAGCCAATGTAGTA +
Preference number: 5 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFSKRTH*GTANVV
Trigger: TACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGA...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGGTAGTTTCAACACAATaGAAGTTTAGACTGCACTGG +
Preference number: 5 (lower is better)
Translates to: SVWHCLSQERWASETYYLVVSTQ*KFRLHW
Trigger: CCAGTGCAGTCTAAACTTCAATTGTGTTGAAACTAC...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATAAAAGTAGAAATGATTaGCTTGGGCTCCTTGACCCT +
Preference number: 5 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNKSRND*LGLLDP
Trigger: AGGGTCAAGGAGCCCAAGCAAATCATTTCTACTTTT...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GGCAAAACTGGAACCTTCAGTGGGAATGTAAAATGGTGCAGCCACCGTGTAAAATGCATTCTTGGCCATTaGTGTCAGTTCACAGAAGTG +
Preference number: 5 (lower is better)
Translates to: GKTGTFSGNVKWCSHRVKCILGH*CQFTEV
Trigger: CACTTCTGTGAACTGACACAAATGGCCAAGAATGCA...TTTTACACGGTGGCTGCACCATTTTACATTCCCACTGAAGGTTCCAGTTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp ACAGCATCATACCAGCTGGACCTAACAGACACAACAGCAGTACACACGTTTTTCTGCATTCTTGGCCATTaGTGTCAGTTCACAGAAGTG +
Preference number: 5 (lower is better)
Translates to: TASYQLDLTDTTAVHTFFCILGH*CQFTEV
Trigger: CACTTCTGTGAACTGACACAAATGGCCAAGAATGCA...GAAAAACGTGTGTACTGCTGTTGTGTCTGTTAGGTCCAGCTGGTATGATGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATGCAAAAACGAGACAGTaGAGGTGTCTCTTCTATTTG +
Preference number: 5 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNAKTRQ*RCLFYL
Trigger: CAAATAGAAGAGACACCTCAACTGTCTCGTTTTTGC...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS TCA 90 bp TTTTCATCCCGAACACAGGATGTGTGGCAAGACAGGGAAGTACCTTaGATAGTAAAGCAAGATGGTAGTCCTTCCAAAAGAGAATGCTGC +
Preference number: 5 (lower is better)
Translates to: FSSRTQDVWQDREVP*IVKQDGSPSKRECC
Trigger: GCAGCATTCTCTTTTGGAAGGACTACCATCTTGCTTTACTATTCAAGGTACTTCCCTGTCTTGCCACACATCCTGTGTTCGGGATGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517464.1
CDS CCA 90 bp AATATGAGAAGTGACGACAGAAAAATTAATTTTGTGGATGAAGACTaGCAGACTCTTAGGAGGAACGCAGGTAAACGGGACCAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: NMRSDDRKINFVDED*QTLRRNAGKRDQRL
Trigger: GAGCCTCTGGTCCCGTTTACCTGCGTTCCTCCTAAGAGTCTGCCAGTCTTCATCCACAAAATTAATTTTTCTGTCGTCACTTCTCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517464.1
CDS-3UTR CAA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCTTGATTAAGCGAGGATaGTGGTGGTCATCAAGAACC +
Preference number: 5 (lower is better)
Translates to: ASPAEQLESYTINMVMFSLIKRG*WWSSRT
Trigger: GGTTCTTGATGACCACCACAATCCTCGCTTAATCAA...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTAACCGGTATAGGATGTaGTTCAGCATGTGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVNRYRM*FSMCRG
Trigger: TCCTCTGCACATGCTGAACAACATCCTATACCGGTT...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATGTAGTTTCAACACAATaGAAGTTTAGACTGCACTGG +
Preference number: 5 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNVVSTQ*KFRLHW
Trigger: CCAGTGCAGTCTAAACTTCAATTGTGTTGAAACTAC...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp AGCATATTATTGGCCGTTAGTGTCACGTCAACAAAGAATGTGGAGCTGACCACCATTTGCTTGGGCTCCTaGACCCTATTCAAAAATGGA +
Preference number: 5 (lower is better)
Translates to: SILLAVSVTSTKNVELTTICLGS*TLFKNG
Trigger: TCCATTTTTGAATAGGGTCAAGGAGCCCAAGCAAAT...GGTGGTCAGCTCCACATTCTTTGTTGACGTGACACTAACGGCCAATAATATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GCCTGTGGAAATATGCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATAAGCCATGCCTTTCCTTaGTGCTTTCTTTATGGACAT +
Preference number: 5 (lower is better)
Translates to: ACGNMPAQQNSWNPTLLISHAFP*CFLYGH
Trigger: ATGTCCATAAAGAAAGCACAAAGGAAAGGCATGGCT...TATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGCATATTTCCACAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp CACAGAACACTCACTATGAGCCCTGCACAGACAGCAGGATTCACAATCTCCAATCTTGTAAAGTTGAACTaGTGGATACGTGGTAGAGAA +
Preference number: 5 (lower is better)
Translates to: HRTLTMSPAQTAGFTISNLVKLN*WIRGRE
Trigger: TTCTCTACCACGTATCCACAAGTTCAACTTTACAAG...ATTGGAGATTGTGAATCCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp AGTGTCTGGCATTGCCTTTCACAGGAGCGATGGGCAAGTGAAACTTACTACCTGCACAGCCTATCAAGATaGAATCATGAAGAAATGGAA +
Preference number: 5 (lower is better)
Translates to: SVWHCLSQERWASETYYLHSLSR*NHEEME
Trigger: TTCCATTTCTTCATGATTCAATCTTGATAGGCTGTG...CAGGTAGTAAGTTTCACTTGCCCATCGCTCCTGTGAAAGGCAATGCCAGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS GCA 90 bp TTCCCTACTCCTCTAATAAGAATGCAGAGGGTAGAGCTTAGGTCTTaGAGAAGATCTTTGATTAAGCGAGGATTGTGGTGGTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: FPTPLIRMQRVELRS*RRSLIKRGLWWSSR
Trigger: TCTTGATGACCACCACAATCCTCGCTTAATCAAAGATCTTCTGCAAGACCTAAGCTCTACCCTCTGCATTCTTATTAGAGGAGTAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
ENST00000524015.1
CDS-3UTR CAA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTTTGATTAAGCGAGGATaGTGGTGGTCATCAAGAACC +
Preference number: 5 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVLIKRG*WWSSRT
Trigger: GGTTCTTGATGACCACCACAATCCTCGCTTAATCAA...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGAACCGGTATAGGATGTaGTTCAGCATGTGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKNRYRM*FSMCRG
Trigger: TCCTCTGCACATGCTGAACAACATCCTATACCGGTT...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp ATGATTGAAAGCAGAGACTCAGATATTTGCACACCCATGTTTACGGCAGCAATACAAGAATGGCTGTCATaGCCCTGGGTTCACTTTCTA +
Preference number: 5 (lower is better)
Translates to: MIESRDSDICTPMFTAAIQEWLS*PWVHFL
Trigger: TAGAAAGTGAACCCAGGGCAATGACAGCCATTCTTG...TATTGCTGCCGTAAACATGGGTGTGCAAATATCTGAGTCTCTGCTTTCAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp GCCAGCCCAGCAGAACAGCTGGAATCCTACACTATTAATATGGTTATGTTTTCCATTTGCTTGGGCTCCTaGACCCTATTCAAAAATGGA +
Preference number: 5 (lower is better)
Translates to: ASPAEQLESYTINMVMFSICLGS*TLFKNG
Trigger: TCCATTTTTGAATAGGGTCAAGGAGCCCAAGCAAAT...GGAAAACATAACCATATTAATAGTGTAGGATTCCAGCTGTTCTGCTGGGCTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAACCTGTTGCTAATCCCTaGGCTTTGCCATTGGGTAGC +
Preference number: 5 (lower is better)
Translates to: STDEYTNKMWSIHRISLKPVANP*ALPLGS
Trigger: GCTACCCAATGGCAAAGCCAAGGGATTAGCAACAGG...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAACTGAGGGTGAGGCCATaGTTCACTTGCTTAGTCATC +
Preference number: 5 (lower is better)
Translates to: STDEYTNKMWSIHRISLKLRVRP*FTCLVI
Trigger: GATGACTAAGCAAGTGAACAATGGCCTCACCCTCAG...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTATTTGCTTGGGCTCCTaGACCCTATTCAAAAATGGA +
Preference number: 5 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVICLGS*TLFKNG
Trigger: TCCATTTTTGAATAGGGTCAAGGAGCCCAAGCAAAT...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCGTCGCAAGACAGAACTaGAACAGCATCATACCAGCT +
Preference number: 5 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFVARQN*NSIIPA
Trigger: AGCTGGTATGATGCTGTTCAAGTTCTGTCTTGCGAC...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp CATATGGGTCAAATGATTTTTGATGGTGCCAAGACCATTCAAGGGAGAAAGGACTATTGTCCAAAAAGTTaGGAACACAGCCACATGCAC +
Preference number: 5 (lower is better)
Translates to: HMGQMIFDGAKTIQGRKDYCPKS*EHSHMH
Trigger: GTGCATGTGGCTGTGTTCCAAACTTTTTGGACAATA...GTCCTTTCTCCCTTGAATGGTCTTGGCACCATCAAAAATCATTTGACCCATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGCTGAGGGTGAGGCCATaGTTCACTTGCTTAGTCATC +
Preference number: 5 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKLRVRP*FTCLVI
Trigger: GATGACTAAGCAAGTGAACAATGGCCTCACCCTCAG...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp AAGAAATACCTGTGCTTCAGGGATAATGGAAACTCAATGTACTTACTCCCTTTCGTAGAAATGATTTGCTaGGGCTCCTTGACCCTATTC +
Preference number: 5 (lower is better)
Translates to: KKYLCFRDNGNSMYLLPFVEMIC*GSLTLF
Trigger: GAATAGGGTCAAGGAGCCCAAGCAAATCATTTCTAC...GAAAGGGAGTAAGTACATTGAGTTTCCATTATCCCTGAAGCACAGGTATTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAAGAGACGGCCACATTGTaGTGTGACGATGCTTATCAT +
Preference number: 5 (lower is better)
Translates to: STDEYTNKMWSIHRISLKETATL*CDDAYH
Trigger: ATGATAAGCATCGTCACACAACAATGTGGCCGTCTC...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp CACAGAAATACCCTGTCTCACCACTTCTGTTTAACACAGTACTGGAGTCTTAGACCCAAGAATGCAAGGTaGGTTCAAGATATAGAAATC +
Preference number: 5 (lower is better)
Translates to: HRNTLSHHFCLTQYWSLRPKNAR*VQDIEI
Trigger: GATTTCTATATCTTGAACCAACCTTGCATTCTTGGG...TCTAAGACTCCAGTACTGTGTTAAACAGAAGTGGTGAGACAGGGTATTTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp GGGTTCACTTTCTATTCAAAGAGGACTCATTTGGGCACAGCCAATGTAGTAGTTCCCAAGAATGCAAGGTaGGTTCAAGATATAGAAATC +
Preference number: 5 (lower is better)
Translates to: GFTFYSKRTHLGTANVVVPKNAR*VQDIEI
Trigger: GATTTCTATATCTTGAACCAACCTTGCATTCTTGGG...AACTACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGAATAGAAAGTGAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp TCAACAGATGAGTACACAAACAAAATGTGGTCCATCCATAGAATCAGCCTTAAATCAAAGAGGACTCATTaGGGCACAGCCAATGTAGTA +
Preference number: 5 (lower is better)
Translates to: STDEYTNKMWSIHRISLKSKRTH*GTANVV
Trigger: TACTACATTGGCTGTGCCCAAATGAGTCCTCTTTGA...TTTAAGGCTGATTCTATGGATGGACCACATTTTGTTTGTGTACTCATCTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp AGACTAGGTTTCACAGTCCACTTATCTACTAAGTTAGGCCTTCGCAATGAAAAGCTTGTAAAGTTGAACTaGTGGATACGTGGTAGAGAA +
Preference number: 5 (lower is better)
Translates to: RLGFTVHLSTKLGLRNEKLVKLN*WIRGRE
Trigger: TTCTCTACCACGTATCCACAAGTTCAACTTTACAAG...CTTTTCATTGCGAAGGCCTAACTTAGTAGATAAGTGGACTGTGAAACCTAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS-3UTR CAA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGGTAGAAATGATTTGCTaGGGCTCCTTGACCCTATTC +
Preference number: 5 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKVEMIC*GSLTLF
Trigger: GAATAGGGTCAAGGAGCCCAAGCAAATCATTTCTAC...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGAAAAGTAGAAATGATTaGCTTGGGCTCCTTGACCCT +
Preference number: 5 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKKSRND*LGLLDP
Trigger: AGGGTCAAGGAGCCCAAGCAAATCATTTCTACTTTT...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
CDS-3UTR CAA 90 bp GTAACCCACCCCCAATTAGTTTCCCAATTGGGAAACTATAATTTGATAATTAAGAGCCATGCCTTTCCTTaGTGCTTTCTTTATGGACAT +
Preference number: 5 (lower is better)
Translates to: VTHPQLVSQLGNYNLIIKSHAFP*CFLYGH
Trigger: ATGTCCATAAAGAAAGCACAAAGGAAAGGCATGGCT...CTTAATTATCAAATTATAGTTTCCCAATTGGGAAACTAATTGGGGGTGGGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350302.8
ENST00000382824.5
CDS GCA 72 bp AACGCAGGTAAACGGGACCAGAGGCTCTGGGGTCAGTaGTGGATCTCTCCATGGCATGCCCTGGCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: NAGKRDQRLWGQ*WISPWHALAVL
Trigger: CAGCACTGCCAGGGCATGCCATGGAGAGATCCAGCACTGACCCCAGAGCCTCTGGTCCCGTTTACCTGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517464.1
CDS CCA 72 bp TCTGGGGTCAGTGCTGGATCTCTCCATGGCATGCCCTaGCAGTGCTGCCAAACCAGGTGCTGTGTGGTGAAG +
Preference number: 6 (lower is better)
Translates to: SGVSAGSLHGMP*QCCQTRCCVVK
Trigger: CTTCACCACACAGCACCTGGTTTGGCAGCACTGCCAGGGCATGCCATGGAGAGATCCAGCACTGACCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517464.1
CDS GCA 72 bp TCGAGCCGGGCAGTGGCCAAGATGACGTGCATGAGATaGAGCACGATGCAACGTTTTCATCCCGAACACAGG +
Preference number: 6 (lower is better)
Translates to: SSRAVAKMTCMR*STMQRFHPEHR
Trigger: CCTGTGTTCGGGATGAAAACGTTGCATCGTGCTGCATCTCATGCACGTCATCTTGGCCACTGCCCGGCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517464.1
CDS GCA 72 bp GAGCTGGAATCGAGCCGGGCAGTGGCCAAGATGACGTaGATGAGATGCAGCACGATGCAACGTTTTCATCCC +
Preference number: 6 (lower is better)
Translates to: ELESSRAVAKMT*MRCSTMQRFHP
Trigger: GGGATGAAAACGTTGCATCGTGCTGCATCTCATGCACGTCATCTTGGCCACTGCCCGGCTCGATTCCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517464.1
CDS GCA 72 bp CCGTGCAGGGGTGTCCTGAGTCCTTCCAAAAGAGAATaGTGCAGTGCCGACAGAAATGCAGTGTGTCTCCGT +
Preference number: 6 (lower is better)
Translates to: PCRGVLSPSKRE*CSADRNAVCLR
Trigger: ACGGAGACACACTGCATTTCTGTCGGCACTGCAGCATTCTCTTTTGGAAGGACTCAGGACACCCCTGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
CDS GCA 72 bp GGGTGTCCTGAGTCCTTCCAAAAGAGAATGCTGCAGTaGCGACAGAAATGCAGTGTGTCTCCGTACTGCTCC +
Preference number: 6 (lower is better)
Translates to: GCPESFQKRMLQ*RQKCSVSPYCS
Trigger: GGAGCAGTACGGAGACACACTGCATTTCTGTCGGCACTGCAGCATTCTCTTTTGGAAGGACTCAGGACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
CDS CAA 90 bp CCTAAGGTGATGATGTCCCATCCGTCTGAGAACCGGTATAGGATGTaGTTCAGCATGTGCAGAGGAAGGTCACTGAGGGTGAGGCCATTG +
Preference number: 6 (lower is better)
Translates to: PKVMMSHPSENRYRM*FSMCRGRSLRVRPL
Trigger: CAATGGCCTCACCCTCAGTGACCTTCCTCTGCACATGCTGAACAACATCCTATACCGGTTCTCAGACGGATGGGACATCATCACCTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
ENST00000519376.5
CDS CCA 72 bp CTGTCTTCACTAAGCATATACAACGTGGGGGTCACCTaGCCTAAGGTGATGATGTCCCATCCGTCTGAGAAC +
Preference number: 6 (lower is better)
Translates to: LSSLSIYNVGVT*PKVMMSHPSEN
Trigger: GTTCTCAGACGGATGGGACATCATCACCTTAGGCCAGGTGACCCCCACGTTGTATATGCTTAGTGAAGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
ENST00000519376.5
CDS CAA 72 bp ATGATGTCCCATCCGTCTGAGAACCGGTATAGGATGTaGTTCAGCATGTGCAGAGGAAGGTCACTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: MMSHPSENRYRM*FSMCRGRSLRV
Trigger: CACCCTCAGTGACCTTCCTCTGCACATGCTGAACAACATCCTATACCGGTTCTCAGACGGATGGGACATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
ENST00000519376.5
CDS CAA 90 bp CACTCAGGTGTTGTTCTGCAAAATATTTCATCAACACTCTCGTCCTaGCTGAGGTGTTTGATCAAAGTGGCCACTCAGCCCTGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: HSGVVLQNISSTLSS*LRCLIKVATQPCSG
Trigger: CCCTGAGCAGGGCTGAGTGGCCACTTTGATCAAACACCTCAGCAAGGACGAGAGTGTTGATGAAATATTTTGCAGAACAACACCTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517464.1
CDS CAA 72 bp TGCGCACATCTAGCAGCCTCCCTCAGCACTCAGGTGTaGTTCTGCAAAATATTTCATCAACACTCTCGTCCT +
Preference number: 6 (lower is better)
Translates to: CAHLAASLSTQV*FCKIFHQHSRP
Trigger: AGGACGAGAGTGTTGATGAAATATTTTGCAGAACAACACCTGAGTGCTGAGGGAGGCTGCTAGATGTGCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517464.1
CDS CAA 72 bp ATGCAGAGGGTAGAGCTTAGGTCTTGCAGAAGATCTTaGATTAAGCGAGGATTGTGGTGGTCATCAAGAACC +
Preference number: 6 (lower is better)
Translates to: MQRVELRSCRRS*IKRGLWWSSRT
Trigger: GGTTCTTGATGACCACCACAATCCTCGCTTAATCAAAGATCTTCTGCAAGACCTAAGCTCTACCCTCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
ENST00000524015.1
CDS CAA 72 bp GTTGTTCTGCAAAATATTTCATCAACACTCTCGTCCTaGCTGAGGTGTTTGATCAAAGTGGCCACTCAGCCC +
Preference number: 6 (lower is better)
Translates to: VVLQNISSTLSS*LRCLIKVATQP
Trigger: GGGCTGAGTGGCCACTTTGATCAAACACCTCAGCAAGGACGAGAGTGTTGATGAAATATTTTGCAGAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517464.1
CDS TCA 72 bp CGAACACAGGATGTGTGGCAAGACAGGGAAGTACCTTaGATAGTAAAGCAAGATGGTAGTCCTTCCAAAAGA +
Preference number: 6 (lower is better)
Translates to: RTQDVWQDREVP*IVKQDGSPSKR
Trigger: TCTTTTGGAAGGACTACCATCTTGCTTTACTATTCAAGGTACTTCCCTGTCTTGCCACACATCCTGTGTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517464.1
CDS GCA 72 bp CCTCTAATAAGAATGCAGAGGGTAGAGCTTAGGTCTTaGAGAAGATCTTTGATTAAGCGAGGATTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: PLIRMQRVELRS*RRSLIKRGLWW
Trigger: CCACCACAATCCTCGCTTAATCAAAGATCTTCTGCAAGACCTAAGCTCTACCCTCTGCATTCTTATTAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
ENST00000524015.1
CDS CCA 72 bp ACAGAAATGCAGTGTGTCTCCGTACTGCTCCTTCGCTaGGTAATGTTTCTGAAGTGCAAAGTACATCAACTT +
Preference number: 6 (lower is better)
Translates to: TEMQCVSVLLLR*VMFLKCKVHQL
Trigger: AAGTTGATGTACTTTGCACTTCAGAAACATTACCCAGCGAAGGAGCAGTACGGAGACACACTGCATTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276326.9
ENST00000350302.8
ENST00000352684.2
ENST00000382824.5
ENST00000517464.1
ENST00000519376.5