RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO21 (Homo sapiens)

Ensembl gene IDs: ENSG00000135108

Ensembl transcript IDs: ENST00000330622.9, ENST00000427718.6, ENST00000547806.1, ENST00000548840.1, ENST00000549689.5, ENST00000550180.5, ENST00000551458.1, ENST00000622495.5

Found 683 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCGCCGCAGAGTGTGGGTGTGAACAGCTGGAGCTCAGTGGTTCCTaGAGACTCAGGGACCACCTGTATTCCACATCCGGCTTCCCACCC +
Preference number: 1 (lower is better)
Translates to: CAAECGCEQLELSGS*RLRDHLYSTSGFPP
Trigger: GGGTGGGAAGCCGGATGTGGAATACAGGTGGTCCCTGAGTCTCCAGGAACCACTGAGCTCCAGCTGTTCACACCCACACTCTGCGGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR TCA 90 bp GCTAAACCGTGGCGAGGTAGTTGCTTGCGCCGCAGAGTGTGGGTGTaGACAGCTGGAGCTCAGTGGTTCCTGGAGACTCAGGGACCACCT +
Preference number: 1 (lower is better)
Translates to: AKPWRGSCLRRRVWV*TAGAQWFLETQGPP
Trigger: AGGTGGTCCCTGAGTCTCCAGGAACCACTGAGCTCCAGCTGTTCACACCCACACTCTGCGGCGCAAGCAACTACCTCGCCACGGTTTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR GCA 90 bp CTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTaGAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGT +
Preference number: 1 (lower is better)
Translates to: LSRRQPALLVEWLSW*SRSRGLRGDVFFRS
Trigger: ACTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR CCA 90 bp GGGTCCAGGAGGCAGGACTTACAGGAATTTGATTGGCATAGACAGTaGCCAATCAGATGTCCGGGCTGTGGGAGCGGAGGCCCTGGGGGA +
Preference number: 1 (lower is better)
Translates to: GSRRQDLQEFDWHRQ*PIRCPGCGSGGPGG
Trigger: TCCCCCAGGGCCTCCGCTCCCACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAAATTCCTGTAAGTCCTGCCTCCTGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548840.1
3UTR CCA 90 bp AAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTaGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGG +
Preference number: 1 (lower is better)
Translates to: KLSRRQPALLVEWLS*CSRSRGLRGDVFFR
Trigger: CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR CCA 90 bp GAGCCGAGGGCAGGGTCCAGGAGGCAGGACTTACAGGAATTTGATTaGCATAGACAGTGGCCAATCAGATGTCCGGGCTGTGGGAGCGGA +
Preference number: 1 (lower is better)
Translates to: EPRAGSRRQDLQEFD*HRQWPIRCPGCGSG
Trigger: TCCGCTCCCACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAAATTCCTGTAAGTCCTGCCTCCTGGACCCTGCCCTCGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
3UTR GCA 90 bp AAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTAGTTGCTTaGGCCGCAGAGTGTGGGTGTGAACAGCTGGAGCTCAGTGGTTCC +
Preference number: 1 (lower is better)
Translates to: KVAARPRLNRGEVVA*AAECGCEQLELSGS
Trigger: GGAACCACTGAGCTCCAGCTGTTCACACCCACACTCTGCGGCGCAAGCAACTACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR CCA 90 bp CGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGCTTaGAAAAGCAGATTCCAACACGCACATCTCCTTTCACACAAGTCC +
Preference number: 1 (lower is better)
Translates to: RHNRLRPAAVRTLAA*KSRFQHAHLLSHKS
Trigger: GGACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAAGCCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR CCA 90 bp CCAGAAGACGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTaGCGGCTTGGAAAAGCAGATTCCAACACGCACATCTCCTTTCAC +
Preference number: 1 (lower is better)
Translates to: PEDATTGFVLLPSGP*RLGKADSNTHISFH
Trigger: GTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAAGCCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCGTCTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR CCA 90 bp ACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTaGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTC +
Preference number: 1 (lower is better)
Translates to: TVFKLSRRQPALLVE*LSWCSRSRGLRGDV
Trigger: GACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR CCA 90 bp AGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTaGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAG +
Preference number: 1 (lower is better)
Translates to: STRYLNLVGGNQHYW*SGFPGAAGPEGSVE
Trigger: CTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR CCA 90 bp AGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTaGGCTCAGTTACTGAGAACTTCGGAAAGGAGCCAGTGCCGTCCG +
Preference number: 1 (lower is better)
Translates to: RVGGAPELHKGVQLL*AQLLRTSERSQCRP
Trigger: CGGACGGCACTGGCTCCTTTCCGAAGTTCTCAGTAACTGAGCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR GCA 90 bp CAGTTACTCTGGGCTCAGTTACTGAGAACTTCGGAAAGGAGCCAGTaGCGTCCGAACACACGGTCAGGCTTTCCCAGAAGACGCCACAAC +
Preference number: 1 (lower is better)
Translates to: QLLWAQLLRTSERSQ*RPNTRSGFPRRRHN
Trigger: GTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCTCCTTTCCGAAGTTCTCAGTAACTGAGCCCAGAGTAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR CCA 90 bp AAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTaGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTG +
Preference number: 1 (lower is better)
Translates to: KSTRYLNLVGGNQHY*WSGFPGAAGPEGSV
Trigger: CACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR CCA 90 bp CCACCCACGCACACGCAGTATGACCTGGGTTTCCCCTTTATACAGTaGAATGCTAAGTGCCTACACCCTAGCCGGGGTCAGCCAACTATG +
Preference number: 1 (lower is better)
Translates to: PPTHTQYDLGFPFIQ*NAKCLHPSRGQPTM
Trigger: CATAGTTGGCTGACCCCGGCTAGGGTGTAGGCACTTAGCATTCCACTGTATAAAGGGGAAACCCAGGTCATACTGCGTGTGCGTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR GCA 90 bp GCATTCAACATGGGTGAGAATACTGCATGCAGATGGACAGACAGGTaGAGAGACAGGCCCCTAACGCCCCATTCACTAGAGCAACTGCAT +
Preference number: 1 (lower is better)
Translates to: AFNMGENTACRWTDR*RDRPLTPHSLEQLH
Trigger: ATGCAGTTGCTCTAGTGAATGGGGCGTTAGGGGCCTGTCTCTGCACCTGTCTGTCCATCTGCATGCAGTATTCTCACCCATGTTGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR GCA 90 bp GTTCACTTACTTGGAGTATGGACTAAGGAGGGGAAAGCAAAGAGATaGGACATCAGCAGCAGAAAGCCTGCGACACGGCAGCTCTGCTCA +
Preference number: 1 (lower is better)
Translates to: VHLLGVWTKEGKAKR*DISSRKPATRQLCS
Trigger: TGAGCAGAGCTGCCGTGTCGCAGGCTTTCTGCTGCTGATGTCGCATCTCTTTGCTTTCCCCTCCTTAGTCCATACTCCAAGTAAGTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR CCA 90 bp TGTATTCCACATCCGGCTTCCCACCCACGCACACGCAGTATGACCTaGGTTTCCCCTTTATACAGTGGAATGCTAAGTGCCTACACCCTA +
Preference number: 1 (lower is better)
Translates to: CIPHPASHPRTRSMT*VSPLYSGMLSAYTL
Trigger: TAGGGTGTAGGCACTTAGCATTCCACTGTATAAAGGGGAAACCCAGGTCATACTGCGTGTGCGTGGGTGGGAAGCCGGATGTGGAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR CCA 90 bp GCAGCAGAAAGCCTGCGACACGGCAGCTCTGCTCAGTTTTCTCCGTaGGGAAAGATCGGAACACTTACAAATGAGAACGGGACTTTAAGT +
Preference number: 1 (lower is better)
Translates to: AAESLRHGSSAQFSP*GKIGTLTNENGTLS
Trigger: ACTTAAAGTCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAGCAGAGCTGCCGTGTCGCAGGCTTTCTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR CCA 90 bp CCATCTCTTTCTAGTAACTGCTTAAAGCCTTCCCTTGCTATGAAGTaGTCTCAGGTGGCTTTCCAAACCTTGGTCACCCCAGGGTTTCCA +
Preference number: 1 (lower is better)
Translates to: PSLSSNCLKPSLAMK*SQVAFQTLVTPGFP
Trigger: TGGAAACCCTGGGGTGACCAAGGTTTGGAAAGCCACCTGAGACCACTTCATAGCAAGGGAAGGCTTTAAGCAGTTACTAGAAAGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR CCA 90 bp AAACTTTCCCCTTTAAATGAAAGTAGTGTACAATCCTCCCAACCTTaGCGGGCCAGGTGCTGTGAGTGGTTACGTTTCCAGATGCAGGTT +
Preference number: 1 (lower is better)
Translates to: KLSPLNESSVQSSQP*RARCCEWLRFQMQV
Trigger: AACCTGCATCTGGAAACGTAACCACTCACAGCACCTGGCCCGCCAAGGTTGGGAGGATTGTACACTACTTTCATTTAAAGGGGAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR TCA 90 bp CAAGGAAATGTTCTGAGACAAATGCAGACAGACAGGGGAATGGAGTaGATACAAAGAATGATTACAGGAGCGTCGACTGTGAGACCTCAT +
Preference number: 1 (lower is better)
Translates to: QGNVLRQMQTDRGME*IQRMITGASTVRPH
Trigger: ATGAGGTCTCACAGTCGACGCTCCTGTAATCATTCTTTGTATTCACTCCATTCCCCTGTCTGTCTGCATTTGTCTCAGAACATTTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR TCA 90 bp GTGAATACAAAGAATGATTACAGGAGCGTCGACTGTGAGACCTCATaGAGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAA +
Preference number: 1 (lower is better)
Translates to: VNTKNDYRSVDCETS*RQNVTNCHHRTSIQ
Trigger: TTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCTTCATGAGGTCTCACAGTCGACGCTCCTGTAATCATTCTTTGTATTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR GCA 90 bp TTGGCAAGGAGGTCATGGTTTACAGGTAGGCTGTCCGCTCACCAATaGTCAGAAAAATTCAGCAGAACATACTTTTCATATTTAGATCCG +
Preference number: 1 (lower is better)
Translates to: LARRSWFTGRLSAHQ*SEKFSRTYFSYLDP
Trigger: CGGATCTAAATATGAAAAGTATGTTCTGCTGAATTTTTCTGAGCATTGGTGAGCGGACAGCCTACCTGTAAACCATGACCTCCTTGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR TCA 90 bp TTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGTTCTaGGACAAATGCAGACAGACAGGGGAATGGAGTGAATACAAAGAA +
Preference number: 1 (lower is better)
Translates to: LLQMHNPICPAKEMF*DKCRQTGEWSEYKE
Trigger: TTCTTTGTATTCACTCCATTCCCCTGTCTGTCTGCATTTGTCTCAGAACATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR GCA 90 bp GACCGAACACGTTCCACAGAGAAATCAGAAGGAAATTATTGCAAATaGATAACCCCATCTGTCCAGCCAAGGAAATGTTCTGAGACAAAT +
Preference number: 1 (lower is better)
Translates to: DRTRSTEKSEGNYCK*ITPSVQPRKCSETN
Trigger: ATTTGTCTCAGAACATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR TCA 90 bp AAAATTCAGCAGAACATACTTTTCATATTTAGATCCGAAGAGAGGTaGGAGACATTCTACTCAAGTCATGGCTGGGCTTTCTGTCCTCAA +
Preference number: 1 (lower is better)
Translates to: KIQQNILFIFRSEER*ETFYSSHGWAFCPQ
Trigger: TTGAGGACAGAAAGCCCAGCCATGACTTGAGTAGAATGTCTCTCACCTCTCTTCGGATCTAAATATGAAAAGTATGTTCTGCTGAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR CCA 90 bp GCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGGCGTGGAGTGGCTTTCCTaGTGCAGCAGGTCCCGAGGG +
Preference number: 2 (lower is better)
Translates to: AESWWSSRAAQRRAVTLGVEWLS*CSRSRG
Trigger: CCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC...GCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR CCA 90 bp CAGAAGACGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGCTTGGCACTACTGGTGGAGTaGCTTTCCTGGTGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: QKTPQQASSCCRQDPGGLALLVE*LSWCSR
Trigger: CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGC...CAAGCCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCGTCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR CCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGGAGTCCCGTTCTCTTaGAAGATAGCAGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPGVPFS*KIAAAA
Trigger: TGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCC...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR CCA 90 bp AGCCAGTGCCGTCCGAACACACGGTCAGGCTTTCCCAGAAGACGCCACAACAGGGGAGTCCCGTTCTCTTaGAAGATAGCAGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: SQCRPNTRSGFPRRRHNRGVPFS*KIAAAA
Trigger: TGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCC...CCTGTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR CAA 90 bp TCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTaGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTCCTCTCTAGAC +
Preference number: 2 (lower is better)
Translates to: SRGLRGDVFFRSPVL*EDSSSSKGAMSSLD
Trigger: GTCTAGAGAGGACATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR CAA 90 bp ACGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGCTaGGAAAAGCAGATTCCAACACGCACATCTCCTTTCACACAAGTC +
Preference number: 2 (lower is better)
Translates to: TPQQASSCCRQDPGG*EKQIPTRTSPFTQV
Trigger: GACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAAGCCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR GCA 90 bp GCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGGCGAGCAACATTGTCTTTaGAGCTGGGGAAGAGCACAC +
Preference number: 2 (lower is better)
Translates to: AESWWSSRAAQRRAVTLGEQHCL*SWGRAH
Trigger: GTGTGCTCTTCCCCAGCTGCAAAGACAATGTTGCTC...GCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR CCA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCGTCCCGAGGGCTCCGTaGAGACGTCTTCTTCCGGAG +
Preference number: 2 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFVPRAP*RRLLPE
Trigger: CTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGAC...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR GCA 90 bp CTGCTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGACAACAGGCTTCGTCCTaGTGCCGTCAGGACCCTGGC +
Preference number: 2 (lower is better)
Translates to: LLSFLRGERSEHLQMRTGQQASS*CRQDPG
Trigger: GCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTG...TCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR CCA 90 bp GCAGCAGAAAGCCTGCGACACGGCAGCTCTGCTCAGTTTTCTCCGTGGGGAAAGTCCCTTGCTATGAAGTaGTCTCAGGTGGCTTTCCAA +
Preference number: 2 (lower is better)
Translates to: AAESLRHGSSAQFSPWGKSLAMK*SQVAFQ
Trigger: TTGGAAAGCCACCTGAGACCACTTCATAGCAAGGGA...CTTTCCCCACGGAGAAAACTGAGCAGAGCTGCCGTGTCGCAGGCTTTCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR GCA 90 bp GCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGGCTCTCCATCTCTAAGATaGTGCCAAGATAGCACACAA +
Preference number: 2 (lower is better)
Translates to: AESWWSSRAAQRRAVTLGSPSLR*CQDSTQ
Trigger: TTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGA...GCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR GCA 90 bp AGCCAGTGCCGTCCGAACACACGGTCAGGCTTTCCCAGAAGACGCCACAACAGGTCTCTCTTTCTAACCTaGCACATTCAAACAGGCCTT +
Preference number: 2 (lower is better)
Translates to: SQCRPNTRSGFPRRRHNRSLFLT*HIQTGL
Trigger: AAGGCCTGTTTGAATGTGGCAGGTTAGAAAGAGAGA...CCTGTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR GCA 90 bp TCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGAGATGGACAGACAGGTaGAGAGACAGGCCCCTAACG +
Preference number: 2 (lower is better)
Translates to: SPQGFQRVNKQQAFNMGERWTDR*RDRPLT
Trigger: CGTTAGGGGCCTGTCTCTGCACCTGTCTGTCCATCT...CTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR TCA 90 bp AGCCAGTGCCGTCCGAACACACGGTCAGGCTTTCCCAGAAGACGCCACAACAGGGAAGACCATGGAGTATaGCTTCTAAGAGCAAACATT +
Preference number: 2 (lower is better)
Translates to: SQCRPNTRSGFPRRRHNREDHGV*LLRANI
Trigger: AATGTTTGCTCTTAGAAGTCATACTCCATGGTCTTC...CCTGTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR CCA 90 bp CTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGACTTTGGCAGGCCGAGAGTTaGTGGAGCTCCAGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: LSFLRGERSEHLQMRTGLWQAES*WSSRAA
Trigger: TGCAGCTCTGGAGCTCCACCAACTCTCGGCCTGCCA...AAGTCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR GCA 90 bp CTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGACTTTCGGAAAGGAGCCAGTaGCGTCCGAACACACGGTCA +
Preference number: 2 (lower is better)
Translates to: LSFLRGERSEHLQMRTGLSERSQ*RPNTRS
Trigger: TGACCGTGTGTTCGGACGGCACTGGCTCCTTTCCGA...AAGTCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR CCA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCAACCAGCACTACTGGTaGAGTGGCTTTCCTGGTGCA +
Preference number: 2 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFNQHYW*SGFPGA
Trigger: TGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTT...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR CCA 90 bp TTCCAAACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTAACCAGCACTACTGGTaGAGTGGCTTTCCTGGTGCA +
Preference number: 2 (lower is better)
Translates to: FQTLVTPGFPKGKQAAGINQHYW*SGFPGA
Trigger: TGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTT...AATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR CCA 90 bp ACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGGAAATTGGCAACCAGCACTACTaGTGGAGTGGCTTTCCTGGT +
Preference number: 2 (lower is better)
Translates to: TQSSLGTEHVPQRNQKEIGNQHY*WSGFPG
Trigger: ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCC...AATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR CCA 90 bp CAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGAATACTGCATGCAGACAGGCCGAGAGTTGGTaGAGCTCCAGAGCTGCACAA +
Preference number: 2 (lower is better)
Translates to: QRVNKQQAFNMGENTACRQAESW*SSRAAQ
Trigger: TTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTG...TCTGCATGCAGTATTCTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR CAA 90 bp ACTTCGGAAGTTAGCTTCTATCGATTAATGACAAGATTAGCTCGCTaGAGAACTGGCAGGCCGAGAGTTGGTGGAGCTCCAGAGCTGCAC +
Preference number: 2 (lower is better)
Translates to: TSEVSFYRLMTRLAR*RTGRPRVGGAPELH
Trigger: GTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTGCCAGTTCTCAAGCGAGCTAATCTTGTCATTAATCGATAGAAGCTAACTTCCGAAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR TCA 90 bp CAGGCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGTGGAGGAATTGTAGATaGGTATGGAAAAATCCATTC +
Preference number: 2 (lower is better)
Translates to: QAESWWSSRAAQRRAVTLWRNCR*VWKNPF
Trigger: GAATGGATTTTTCCATACTCATCTACAATTCCTCCA...CAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR CCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGGGAGTCCCGTTCTCTTaGAAGATAGCAGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLGVPFS*KIAAAA
Trigger: TGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCC...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR CCA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCGTCCCGAGGGCTCCGTaGAGACGTCTTCTTCCGGAG +
Preference number: 2 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLVPRAP*RRLLPE
Trigger: CTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGAC...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR CCA 90 bp CAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGAATACTGCATGCAGAGGCAACCAGCACTACTaGTGGAGTGGCTTTCCTGGT +
Preference number: 2 (lower is better)
Translates to: QRVNKQQAFNMGENTACRGNQHY*WSGFPG
Trigger: ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCC...TCTGCATGCAGTATTCTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR GCA 90 bp CTGCTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGAGAGCAACATTGTCTTTaGAGCTGGGGAAGAGCACAC +
Preference number: 2 (lower is better)
Translates to: LLSFLRGERSEHLQMRTGEQHCL*SWGRAH
Trigger: GTGTGCTCTTCCCCAGCTGCAAAGACAATGTTGCTC...TCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR GCA 90 bp GCAGGTTCAAATCCTTTGACTTTGGATTTGACTGATGAGGAACATGGACAGTGGAGATGGACAGACAGGTaGAGAGACAGGCCCCTAACG +
Preference number: 2 (lower is better)
Translates to: AGSNPLTLDLTDEEHGQWRWTDR*RDRPLT
Trigger: CGTTAGGGGCCTGTCTCTGCACCTGTCTGTCCATCT...CCACTGTCCATGTTCCTCATCAGTCAAATCCAAAGTCAAAGGATTTGAACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR GCA 90 bp ACATTCAAGGTTAAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTAGTTGGTGAGAATACTGCATaGAGATGGACAGACAGGTGC +
Preference number: 2 (lower is better)
Translates to: TFKVKVAARPRLNRGEVVGENTA*RWTDRC
Trigger: GCACCTGTCTGTCCATCTGCATGCAGTATTCTCACC...AACTACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTTAACCTTGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR CCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACAGTGGAGTGGCTTTCCTaGTGCAGCAGGTCCCGAGGG +
Preference number: 2 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTVEWLS*CSRSRG
Trigger: CCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR CCA 90 bp ACATTCAAGGTTAAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTAGTTGGCAGGCCATTTGCGTaGTTTCTCTGGATAAGTTCC +
Preference number: 2 (lower is better)
Translates to: TFKVKVAARPRLNRGEVVGRPFA*FLWISS
Trigger: GGAACTTATCCAGAGAAACCACGCAAATGGCCTGCC...AACTACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTTAACCTTGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR CCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGCATTGTCTTTGCAGCTaGGGAAGAGCACACGGTATT +
Preference number: 2 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLHCLCS*GRAHGI
Trigger: AATACCGTGTGCTCTTCCCCAGCTGCAAAGACAATG...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR CCA 90 bp ACATTCAAGGTTAAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTAGTTGCTCAGTTTTCTCCGTaGGGAAAGATCGGAACACTT +
Preference number: 2 (lower is better)
Translates to: TFKVKVAARPRLNRGEVVAQFSP*GKIGTL
Trigger: AAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAGC...AACTACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTTAACCTTGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR TCA 90 bp ACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGGAAATTGACTGTGAGACCTCATaGAGACAGAATGTCACAAAC +
Preference number: 2 (lower is better)
Translates to: TQSSLGTEHVPQRNQKEIDCETS*RQNVTN
Trigger: GTTTGTGACATTCTGTCTTCATGAGGTCTCACAGTC...AATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR TCA 90 bp GCAATTGTCCCACATCCAAATTTTGCATTTTGTCCAGTTGATGTCTCTCCTTCCCAGGAGCGTCGACTGTaGGACCTCATGAAGACAGAA +
Preference number: 2 (lower is better)
Translates to: AIVPHPNFAFCPVDVSPSQERRL*DLMKTE
Trigger: TTCTGTCTTCATGAGGTCTCACAGTCGACGCTCCTG...GGAAGGAGAGACATCAACTGGACAAAATGCAAAATTTGGATGTGGGACAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR TCA 90 bp TTCTGGACACATCGTATACAGCACAGCCATTCAAATCAACGGCAACAGAACGCAGACTGTGAGACCTCATaGAGACAGAATGTCACAAAC +
Preference number: 2 (lower is better)
Translates to: FWTHRIQHSHSNQRQQNADCETS*RQNVTN
Trigger: GTTTGTGACATTCTGTCTTCATGAGGTCTCACAGTC...TGCGTTCTGTTGCCGTTGATTTGAATGGCTGTGCTGTATACGATGTGTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR TCA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAAGTGAATACAAAGAATaGTTACAGGAGCGTCGACTG +
Preference number: 2 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSESEYKE*LQERRL
Trigger: CAGTCGACGCTCCTGTAATCATTCTTTGTATTCACT...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR TCA 90 bp CAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGAATACTGCATGCAGAGCCAAGGAAATGTTCTaGGACAAATGCAGACAGACA +
Preference number: 2 (lower is better)
Translates to: QRVNKQQAFNMGENTACRAKEMF*DKCRQT
Trigger: TGTCTGTCTGCATTTGTCTCAGAACATTTCCTTGGC...TCTGCATGCAGTATTCTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR TCA 90 bp CTGCTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGACATTTTGGACATAACTaGTGTCTCACTGAGACAGCT +
Preference number: 2 (lower is better)
Translates to: LLSFLRGERSEHLQMRTGHFGHN*CLTETA
Trigger: AGCTGTCTCAGTGAGACATCAGTTATGTCCAAAATG...TCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR CCA 90 bp GCAGGTTCAAATCCTTTGACTTTGGATTTGACTGATGAGGAACATGGACAGTGGAATACTGCATGCAGATaGACAGACAGGTGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: AGSNPLTLDLTDEEHGQWNTACR*TDRCRD
Trigger: GTCTCTGCACCTGTCTGTCCATCTGCATGCAGTATT...CCACTGTCCATGTTCCTCATCAGTCAAATCCAAAGTCAAAGGATTTGAACCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR CCA 90 bp AAACATGACGCCTGGCAAAACCGGTCTGATTCTAAGGTAAACTCATTTTGGACATGGCTTTCCAAACCTTaGTCACCCCAGGGTTTCCAA +
Preference number: 2 (lower is better)
Translates to: KHDAWQNRSDSKVNSFWTWLSKP*SPQGFQ
Trigger: TTGGAAACCCTGGGGTGACCAAGGTTTGGAAAGCCA...TGTCCAAAATGAGTTTACCTTAGAATCAGACCGGTTTTGCCAGGCGTCATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR CAA 90 bp ACATTCTACTCAAGTCATGGCTGGGCTTTCTGTCCTCAAACGAAATaGGGCAGGCCATTTGCGTGGTTTCTCTGGATAAGTTCCATTTAT +
Preference number: 2 (lower is better)
Translates to: TFYSSHGWAFCPQTK*GRPFAWFLWISSIY
Trigger: ATAAATGGAACTTATCCAGAGAAACCACGCAAATGGCCTGCCCAATTTCGTTTGAGGACAGAAAGCCCAGCCATGACTTGAGTAGAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR GCA 90 bp ACATTCAAGGTTAAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTAGTTAAAAACACGAAGAGCTaGATCTTGATCATCATGGAC +
Preference number: 2 (lower is better)
Translates to: TFKVKVAARPRLNRGEVVKNTKS*ILIIMD
Trigger: GTCCATGATGATCAAGATGCAGCTCTTCGTGTTTTT...AACTACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTTAACCTTGAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR CCA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACAAACCAGCACTACTGGTaGAGTGGCTTTCCTGGTGCA +
Preference number: 2 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTNQHYW*SGFPGA
Trigger: TGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTT...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR TCA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCGCCAAGGAAATGTTCTaGGACAAATGCAGACAGACA +
Preference number: 2 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLAKEMF*DKCRQT
Trigger: TGTCTGTCTGCATTTGTCTCAGAACATTTCCTTGGC...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR TCA 90 bp AAGAACCTGGTTTTCTTTCAAAGCATGAGCAGTTCTCATTTTACAACATGTGTTTCTGGGCTCAGTTACTaGGAACTTCGGAAAGGAGCC +
Preference number: 2 (lower is better)
Translates to: KNLVFFQSMSSSHFTTCVSGLSY*ELRKGA
Trigger: GGCTCCTTTCCGAAGTTCTCAGTAACTGAGCCCAGA...AACACATGTTGTAAAATGAGAACTGCTCATGCTTTGAAAGAAAACCAGGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR GCA 90 bp AAACATGACGCCTGGCAAAACCGGTCTGATTCTAAGGTAAACTCATTTTGGACACAGAAAACCAACAATTaGAACTCTCAGCATGCTCAG +
Preference number: 2 (lower is better)
Translates to: KHDAWQNRSDSKVNSFWTQKTNN*NSQHAQ
Trigger: CTGAGCATGCTGAGAGTTGCAATTGTTGGTTTTCTG...TGTCCAAAATGAGTTTACCTTAGAATCAGACCGGTTTTGCCAGGCGTCATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR CCA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACACATTGTCTTTGCAGCTaGGGAAGAGCACACGGTATT +
Preference number: 2 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTHCLCS*GRAHGI
Trigger: AATACCGTGTGCTCTTCCCCAGCTGCAAAGACAATG...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR CCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACATTGTCTTTGCAGCTaGGGAAGAGCACACGGTATT +
Preference number: 2 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTHCLCS*GRAHGI
Trigger: AATACCGTGTGCTCTTCCCCAGCTGCAAAGACAATG...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR TCA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACAGACTGTGAGACCTCATaGAGACAGAATGTCACAAAC +
Preference number: 2 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTDCETS*RQNVTN
Trigger: GTTTGTGACATTCTGTCTTCATGAGGTCTCACAGTC...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR GCA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATGAGCAACATTGTCTTTaGAGCTGGGGAAGAGCACAC +
Preference number: 2 (lower is better)
Translates to: ILITISLLMSPSLRCCQDEQHCL*SWGRAH
Trigger: GTGTGCTCTTCCCCAGCTGCAAAGACAATGTTGCTC...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR GCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACATCAGAAGGAAATTATTaGAAATGCATAACCCCATCT +
Preference number: 2 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTSEGNY*KCITPS
Trigger: AGATGGGGTTATGCATTTGCAATAATTTCCTTCTGA...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR GCA 90 bp AAGAACCTGGTTTTCTTTCAAAGCATGAGCAGTTCTCATTTTACAACATGTGTTTCTCTTTCTAGTAACTaGTTAAAGCCTTCCCTTGCT +
Preference number: 2 (lower is better)
Translates to: KNLVFFQSMSSSHFTTCVSLSSN*LKPSLA
Trigger: AGCAAGGGAAGGCTTTAAGCAGTTACTAGAAAGAGA...AACACATGTTGTAAAATGAGAACTGCTCATGCTTTGAAAGAAAACCAGGTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR GCA 72 bp GGGCTCTCAGGTGCTCCCAGGGCCGGCGCAGTGGGCTaGAGTTCCCACAGGTGGCCACACGAGGGCATCTCC +
Preference number: 3 (lower is better)
Translates to: GLSGAPRAGAVG*SSHRWPHEGIS
Trigger: GGAGATGCCCTCGTGTGGCCACCTGTGGGAACTGCAGCCCACTGCGCCGGCCCTGGGAGCACCTGAGAGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
3UTR GCA 72 bp CTACCCAACCTTACTGTACACTTGCGGGCTCTCAGGTaGTCCCAGGGCCGGCGCAGTGGGCTGCAGTTCCCA +
Preference number: 3 (lower is better)
Translates to: LPNLTVHLRALR*SQGRRSGLQFP
Trigger: TGGGAACTGCAGCCCACTGCGCCGGCCCTGGGAGCACCTGAGAGCCCGCAAGTGTACAGTAAGGTTGGGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
3UTR CCA 72 bp AGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTaGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTC +
Preference number: 3 (lower is better)
Translates to: RRQPALLVEWLS*CSRSRGLRGDV
Trigger: GACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR GCA 72 bp AGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTaGAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTC +
Preference number: 3 (lower is better)
Translates to: RQPALLVEWLSW*SRSRGLRGDVF
Trigger: GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR CCA 72 bp GTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTaGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGA +
Preference number: 3 (lower is better)
Translates to: VAFLVQQVPRAP*RRLLPESRSLG
Trigger: TCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR TCA 72 bp TGGCGAGGTAGTTGCTTGCGCCGCAGAGTGTGGGTGTaGACAGCTGGAGCTCAGTGGTTCCTGGAGACTCAG +
Preference number: 3 (lower is better)
Translates to: WRGSCLRRRVWV*TAGAQWFLETQ
Trigger: CTGAGTCTCCAGGAACCACTGAGCTCCAGCTGTTCACACCCACACTCTGCGGCGCAAGCAACTACCTCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR GCA 72 bp GCTAGACCAAGGCTAAACCGTGGCGAGGTAGTTGCTTaGGCCGCAGAGTGTGGGTGTGAACAGCTGGAGCTC +
Preference number: 3 (lower is better)
Translates to: ARPRLNRGEVVA*AAECGCEQLEL
Trigger: GAGCTCCAGCTGTTCACACCCACACTCTGCGGCGCAAGCAACTACCTCGCCACGGTTTAGCCTTGGTCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR CCA 72 bp GCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTaGCGGCTTGGAAAAGCAGATTCCAACACGCACATC +
Preference number: 3 (lower is better)
Translates to: ATTGFVLLPSGP*RLGKADSNTHI
Trigger: GATGTGCGTGTTGGAATCTGCTTTTCCAAGCCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR CAA 90 bp CAGGCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGCGGAGTCCCGTTCTCTaGGAAGATAGCAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: QAESWWSSRAAQRRAVTLRSPVL*EDSSSS
Trigger: GCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCG...CAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR GCA 72 bp GAACTGGCAGGCCGAGAGTTGGTGGAGCTCCAGAGCTaGACAAAGGCGTGCAGTTACTCTGGGCTCAGTTAC +
Preference number: 3 (lower is better)
Translates to: ELAGRELVELQS*TKACSYSGLSY
Trigger: GTAACTGAGCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTGCCAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR CCA 72 bp AAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTaGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: KLSRRQPALLVE*LSWCSRSRGLR
Trigger: ACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR CCA 72 bp GAGTGTGGGTGTGAACAGCTGGAGCTCAGTGGTTCCTaGAGACTCAGGGACCACCTGTATTCCACATCCGGC +
Preference number: 3 (lower is better)
Translates to: ECGCEQLELSGS*RLRDHLYSTSG
Trigger: GCCGGATGTGGAATACAGGTGGTCCCTGAGTCTCCAGGAACCACTGAGCTCCAGCTGTTCACACCCACACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR CAA 90 bp GCAGCAGAAAGCCTGCGACACGGCAGCTCTGCTCAGTTTTCTCCGTGGGGAAAGACAAGATTAGCTCGCTaGAGAACTGGCAGGCCGAGA +
Preference number: 3 (lower is better)
Translates to: AAESLRHGSSAQFSPWGKTRLAR*RTGRPR
Trigger: TCTCGGCCTGCCAGTTCTCAAGCGAGCTAATCTTGT...CTTTCCCCACGGAGAAAACTGAGCAGAGCTGCCGTGTCGCAGGCTTTCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR CCA 72 bp AGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGCTTaGAAAAGCAGATTCCAACACGCACATCTCCTTTCA +
Preference number: 3 (lower is better)
Translates to: RLRPAAVRTLAA*KSRFQHAHLLS
Trigger: TGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAAGCCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR GCA 72 bp TGGGCTCAGTTACTGAGAACTTCGGAAAGGAGCCAGTaGCGTCCGAACACACGGTCAGGCTTTCCCAGAAGA +
Preference number: 3 (lower is better)
Translates to: WAQLLRTSERSQ*RPNTRSGFPRR
Trigger: TCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCTCCTTTCCGAAGTTCTCAGTAACTGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR GCA 72 bp GACATCAGCAGCAGAAAGCCTGCGACACGGCAGCTCTaGTCAGTTTTCTCCGTGGGGAAAGATCGGAACACT +
Preference number: 3 (lower is better)
Translates to: DISSRKPATRQL*SVFSVGKDRNT
Trigger: AGTGTTCCGATCTTTCCCCACGGAGAAAACTGAGCAGAGCTGCCGTGTCGCAGGCTTTCTGCTGCTGATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR GCA 72 bp GAAAGCAAAGAGATGCGACATCAGCAGCAGAAAGCCTaGGACACGGCAGCTCTGCTCAGTTTTCTCCGTGGG +
Preference number: 3 (lower is better)
Translates to: ESKEMRHQQQKA*DTAALLSFLRG
Trigger: CCCACGGAGAAAACTGAGCAGAGCTGCCGTGTCGCAGGCTTTCTGCTGCTGATGTCGCATCTCTTTGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR GCA 72 bp GACCTGGGTTTCCCCTTTATACAGTGGAATGCTAAGTaGCTACACCCTAGCCGGGGTCAGCCAACTATGGCC +
Preference number: 3 (lower is better)
Translates to: DLGFPFIQWNAK*LHPSRGQPTMA
Trigger: GGCCATAGTTGGCTGACCCCGGCTAGGGTGTAGGCACTTAGCATTCCACTGTATAAAGGGGAAACCCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR CCA 72 bp ATTAGCTCGCTTGAGAACTGGCAGGCCGAGAGTTGGTaGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACT +
Preference number: 3 (lower is better)
Translates to: ISSLENWQAESW*SSRAAQRRAVT
Trigger: AGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTGCCAGTTCTCAAGCGAGCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR CCA 72 bp AAGATTAGCTCGCTTGAGAACTGGCAGGCCGAGAGTTaGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTT +
Preference number: 3 (lower is better)
Translates to: KISSLENWQAES*WSSRAAQRRAV
Trigger: AACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTGCCAGTTCTCAAGCGAGCTAATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR CCA 72 bp AGGCAGGACTTACAGGAATTTGATTGGCATAGACAGTaGCCAATCAGATGTCCGGGCTGTGGGAGCGGAGGC +
Preference number: 3 (lower is better)
Translates to: RQDLQEFDWHRQ*PIRCPGCGSGG
Trigger: GCCTCCGCTCCCACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAAATTCCTGTAAGTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
3UTR CCA 72 bp CATCCGGCTTCCCACCCACGCACACGCAGTATGACCTaGGTTTCCCCTTTATACAGTGGAATGCTAAGTGCC +
Preference number: 3 (lower is better)
Translates to: HPASHPRTRSMT*VSPLYSGMLSA
Trigger: GGCACTTAGCATTCCACTGTATAAAGGGGAAACCCAGGTCATACTGCGTGTGCGTGGGTGGGAAGCCGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR GCA 72 bp ATGGGTGAGAATACTGCATGCAGATGGACAGACAGGTaGAGAGACAGGCCCCTAACGCCCCATTCACTAGAG +
Preference number: 3 (lower is better)
Translates to: MGENTACRWTDR*RDRPLTPHSLE
Trigger: CTCTAGTGAATGGGGCGTTAGGGGCCTGTCTCTGCACCTGTCTGTCCATCTGCATGCAGTATTCTCACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR GCA 72 bp CTTGGAGTATGGACTAAGGAGGGGAAAGCAAAGAGATaGGACATCAGCAGCAGAAAGCCTGCGACACGGCAG +
Preference number: 3 (lower is better)
Translates to: LGVWTKEGKAKR*DISSRKPATRQ
Trigger: CTGCCGTGTCGCAGGCTTTCTGCTGCTGATGTCGCATCTCTTTGCTTTCCCCTCCTTAGTCCATACTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR CCA 72 bp TCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTaGAAGATAGCAGCAGCAGCAAAGGTGCAATGTCCT +
Preference number: 3 (lower is better)
Translates to: SVETSSSGVPFS*KIAAAAKVQCP
Trigger: AGGACATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR CCA 72 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTaGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGC +
Preference number: 3 (lower is better)
Translates to: YLNLVGGNQHYW*SGFPGAAGPEG
Trigger: GCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR CCA 72 bp CGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTaGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAG +
Preference number: 3 (lower is better)
Translates to: RYLNLVGGNQHY*WSGFPGAAGPE
Trigger: CTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR CCA 72 bp GCAGGGTCCAGGAGGCAGGACTTACAGGAATTTGATTaGCATAGACAGTGGCCAATCAGATGTCCGGGCTGT +
Preference number: 3 (lower is better)
Translates to: AGSRRQDLQEFD*HRQWPIRCPGC
Trigger: ACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAAATTCCTGTAAGTCCTGCCTCCTGGACCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
3UTR CCA 72 bp CACACGCAGTATGACCTGGGTTTCCCCTTTATACAGTaGAATGCTAAGTGCCTACACCCTAGCCGGGGTCAG +
Preference number: 3 (lower is better)
Translates to: HTQYDLGFPFIQ*NAKCLHPSRGQ
Trigger: CTGACCCCGGCTAGGGTGTAGGCACTTAGCATTCCACTGTATAAAGGGGAAACCCAGGTCATACTGCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR TCA 72 bp TGTACAATCCTCCCAACCTTGGCGGGCCAGGTGCTGTaGGTGGTTACGTTTCCAGATGCAGGTTCAAATCCT +
Preference number: 3 (lower is better)
Translates to: CTILPTLAGQVL*VVTFPDAGSNP
Trigger: AGGATTTGAACCTGCATCTGGAAACGTAACCACTCACAGCACCTGGCCCGCCAAGGTTGGGAGGATTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR CAA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAACGGAGTCCCGTTCTCTaGGAAGATAGCAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSERSPVL*EDSSSS
Trigger: GCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCG...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR-3UTR CAA 90 bp GCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGGCATCAGAAGGAAATTATaGCAAATGCATAACCCCATC +
Preference number: 3 (lower is better)
Translates to: AESWWSSRAAQRRAVTLGIRRKL*QMHNPI
Trigger: GATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT...GCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR CCA 72 bp CTATCGATTAATGACAAGATTAGCTCGCTTGAGAACTaGCAGGCCGAGAGTTGGTGGAGCTCCAGAGCTGCA +
Preference number: 3 (lower is better)
Translates to: LSINDKISSLEN*QAESWWSSRAA
Trigger: TGCAGCTCTGGAGCTCCACCAACTCTCGGCCTGCCAGTTCTCAAGCGAGCTAATCTTGTCATTAATCGATAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR CAA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCAGAGCAACATTGTCTTaGCAGCTGGGGAAGAGCACA +
Preference number: 3 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFRATLS*QLGKST
Trigger: TGTGCTCTTCCCCAGCTGCAAAGACAATGTTGCTCT...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR TCA 72 bp CCAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTaGGAATACTGCATGCAGATGGACAGACAGGTGCAG +
Preference number: 3 (lower is better)
Translates to: PKGKQAAGIQHG*EYCMQMDRQVQ
Trigger: CTGCACCTGTCTGTCCATCTGCATGCAGTATTCTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR TCA 72 bp TTGCTGTGTAAACGCGCTTATAATGGGGATCTGTTATaGGTCTCAGGCAGGCGACATGAAAGCCGGCCTTTC +
Preference number: 3 (lower is better)
Translates to: LLCKRAYNGDLL*VSGRRHESRPF
Trigger: GAAAGGCCGGCTTTCATGTCGCCTGCCTGAGACTCATAACAGATCCCCATTATAAGCGCGTTTACACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR CCA 72 bp CCTTTAAATGAAAGTAGTGTACAATCCTCCCAACCTTaGCGGGCCAGGTGCTGTGAGTGGTTACGTTTCCAG +
Preference number: 3 (lower is better)
Translates to: PLNESSVQSSQP*RARCCEWLRFQ
Trigger: CTGGAAACGTAACCACTCACAGCACCTGGCCCGCCAAGGTTGGGAGGATTGTACACTACTTTCATTTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR-3UTR CAA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGAGAGCAACATTGTCTTaGCAGCTGGGGAAGAGCACA +
Preference number: 3 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLRATLS*QLGKST
Trigger: TGTGCTCTTCCCCAGCTGCAAAGACAATGTTGCTCT...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR CCA 72 bp ATCCGAAGAGAGGTGAGAGACATTCTACTCAAGTCATaGCTGGGCTTTCTGTCCTCAAACGAAATTGGGCAG +
Preference number: 3 (lower is better)
Translates to: IRREVRDILLKS*LGFLSSNEIGQ
Trigger: CTGCCCAATTTCGTTTGAGGACAGAAAGCCCAGCCATGACTTGAGTAGAATGTCTCTCACCTCTCTTCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR CAA 90 bp AAGAGAAGGGAGACTCACACTGAAGGCATTCTTGTCTCTTACCAGCTTCCACAGAGGACTTACAGGAATTaGATTGGCATAGACAGTGGC +
Preference number: 3 (lower is better)
Translates to: KRRETHTEGILVSYQLPQRTYRN*IGIDSG
Trigger: GCCACTGTCTATGCCAATCAAATTCCTGTAAGTCCT...CTGTGGAAGCTGGTAAGAGACAAGAATGCCTTCAGTGTGAGTCTCCCTTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
3UTR TCA 72 bp ATGCATAACCCCATCTGTCCAGCCAAGGAAATGTTCTaGGACAAATGCAGACAGACAGGGGAATGGAGTGAA +
Preference number: 3 (lower is better)
Translates to: MHNPICPAKEMF*DKCRQTGEWSE
Trigger: TTCACTCCATTCCCCTGTCTGTCTGCATTTGTCTCAGAACATTTCCTTGGCTGGACAGATGGGGTTATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR GCA 72 bp CACACTTCTCTTAGAAAGTCACGACGCACAGTACTGTaGGTCACAGGTATTGAGAAACACCACCATAGAGTC +
Preference number: 3 (lower is better)
Translates to: HTSLRKSRRTVL*VTGIEKHHHRV
Trigger: GACTCTATGGTGGTGTTTCTCAATACCTGTGACGCACAGTACTGTGCGTCGTGACTTTCTAAGAGAAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR TCA 72 bp AAGAATGATTACAGGAGCGTCGACTGTGAGACCTCATaGAGACAGAATGTCACAAACTGTCACCACAGGACA +
Preference number: 3 (lower is better)
Translates to: KNDYRSVDCETS*RQNVTNCHHRT
Trigger: TGTCCTGTGGTGACAGTTTGTGACATTCTGTCTTCATGAGGTCTCACAGTCGACGCTCCTGTAATCATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR GCA 72 bp TCCCACATAGTAGGTAGTAACATCACACGGAAACAGTaGTCTGAAGACATTCTGGACACATCGTATACAGCA +
Preference number: 3 (lower is better)
Translates to: SHIVGSNITRKQ*SEDILDTSYTA
Trigger: TGCTGTATACGATGTGTCCAGAATGTCTTCAGAGCACTGTTTCCGTGTGATGTTACTACCTACTATGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR GCA 72 bp TGTACGTGGCCTGCAAAGCCTAAAATCTTTACTATCTaGGTCTGCTTTATAGGATTGCTGGGAGGATTACAA +
Preference number: 3 (lower is better)
Translates to: CTWPAKPKIFTI*VCFIGLLGGLQ
Trigger: TTGTAATCCTCCCAGCAATCCTATAAAGCAGACGCAGATAGTAAAGATTTTAGGCTTTGCAGGCCACGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR CCA 72 bp GTAACATCACACGGAAACAGTGCTCTGAAGACATTCTaGACACATCGTATACAGCACAGCCATTCAAATCAA +
Preference number: 3 (lower is better)
Translates to: VTSHGNSALKTF*THRIQHSHSNQ
Trigger: TTGATTTGAATGGCTGTGCTGTATACGATGTGTCCAGAATGTCTTCAGAGCACTGTTTCCGTGTGATGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR TCA 72 bp CAGAACATACTTTTCATATTTAGATCCGAAGAGAGGTaGGAGACATTCTACTCAAGTCATGGCTGGGCTTTC +
Preference number: 3 (lower is better)
Translates to: QNILFIFRSEER*ETFYSSHGWAF
Trigger: GAAAGCCCAGCCATGACTTGAGTAGAATGTCTCTCACCTCTCTTCGGATCTAAATATGAAAAGTATGTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR GCA 72 bp TGGCCTGCAAAGCCTAAAATCTTTACTATCTGCGTCTaGTTTATAGGATTGCTGGGAGGATTACAAAGACTT +
Preference number: 3 (lower is better)
Translates to: WPAKPKIFTICV*FIGLLGGLQRL
Trigger: AAGTCTTTGTAATCCTCCCAGCAATCCTATAAAGCAGACGCAGATAGTAAAGATTTTAGGCTTTGCAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR-3UTR CAA 90 bp GCAATTGTCCCACATCCAAATTTTGCATTTTGTCCAGTTGATGTCTCTCCTTCCCAGAAAGTGCAATCTTaGCATGACAACCAGATAATT +
Preference number: 3 (lower is better)
Translates to: AIVPHPNFAFCPVDVSPSQKVQS*HDNQII
Trigger: AATTATCTGGTTGTCATGCAAAGATTGCACTTTCTG...GGAAGGAGAGACATCAACTGGACAAAATGCAAAATTTGGATGTGGGACAATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp AGCCACAGCCTTGGGAGGCCAGGGAGCACTAGGGGGCCCCCAGGTGTTCATCCGGGCGGGTATGACTACTaGCCCCTCGCCAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SHSLGRPGSTRGPPGVHPGGYDY*PLARAA
Trigger: TGCCGCCCTGGCGAGGGGTCAGTAGTCATACCCGCC...CGGATGAACACCTGGGGGCCCCCTAGTGCTCCCTGGCCTCCCAAGGCTGTGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR TCA 90 bp AGCCTTGGGAGGCCAGGGAGCACTAGGGGGCCCCCAGGTGTTCATCCGGTTCCCGGGGGAGGGCGGGTATaGCTACTGACCCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: SLGRPGSTRGPPGVHPVPGGGRV*LLTPRQ
Trigger: CTGGCGAGGGGTCAGTAGTCATACCCGCCCTCCCCC...GGGAACCGGATGAACACCTGGGGGCCCCCTAGTGCTCCCTGGCCTCCCAAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp GGCACCTGCCGGGGCGGCAGTGGCCCAGACGCCTACCCAACCTTACTGTACACTCCCACCGCCCCGTGCTaGCCCGGGTCTAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GTCRGGSGPDAYPTLLYTPTAPC*PGSRVW
Trigger: CCAAACCCTAGACCCGGGGCAGCACGGGGCGGTGGG...AGTGTACAGTAAGGTTGGGTAGGCGTCTGGGCCACTGCCGCCCCGGCAGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp AGCCTTGGGAGGCCAGGGAGCACTAGGGGGCCCCCAGGTGTTCATCCGGTTCCCGCCGGCGCAGTGGGCTaGAGTTCCCACAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SLGRPGSTRGPPGVHPVPAGAVG*SSHRWP
Trigger: TGGCCACCTGTGGGAACTGCAGCCCACTGCGCCGGC...GGGAACCGGATGAACACCTGGGGGCCCCCTAGTGCTCCCTGGCCTCCCAAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp GCCCCCAGGTGTTCATCCGGTTCCCTTCTAGTCTGGGAGGAGCCGAGGGCAGGGTTGCGGGCTCTCAGGTaGTCCCAGGGCCGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: APRCSSGSLLVWEEPRAGLRALR*SQGRRS
Trigger: ACTGCGCCGGCCCTGGGAGCACCTGAGAGCCCGCAA...CCCTGCCCTCGGCTCCTCCCAGACTAGAAGGGAACCGGATGAACACCTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp GGGGCCCCCAGGTGTTCATCCGGTTCCCTTCTAGTCTGGGAGGAGCCGAGGGCACCAGGGCCGGCGCAGTaGGCTGCAGTTCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: GAPRCSSGSLLVWEEPRAPGPAQ*AAVPTG
Trigger: ACCTGTGGGAACTGCAGCCCACTGCGCCGGCCCTGG...TGCCCTCGGCTCCTCCCAGACTAGAAGGGAACCGGATGAACACCTGGGGGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp GTGTTCATCCGGTTCCCTTCTAGTCTGGGAGGAGCCGAGGGCAGGGTCCAGGAGAGCCTTGCCCTGGGCTaGCACCTGCCGGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: VFIRFPSSLGGAEGRVQESLALG*HLPGRQ
Trigger: CTGCCGCCCCGGCAGGTGCCAGCCCAGGGCAAGGCT...CTCCTGGACCCTGCCCTCGGCTCCTCCCAGACTAGAAGGGAACCGGATGAACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGCCGCCGGCAGGTGCTaGAGACACGGCCGATGTCGG +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPAAGRC*RHGRCR
Trigger: CCGACATCGGCCGTGTCTCCAGCACCTGCCGGCGGC...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330622.9
ENST00000622495.5
CDS-3UTR CCA 90 bp AGCCTTGGGAGGCCAGGGAGCACTAGGGGGCCCCCAGGTGTTCATCCGGTTCCCTGCAGTTCCCACAGGTaGCCACACGAGGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: SLGRPGSTRGPPGVHPVPCSSHR*PHEGIS
Trigger: GGAGATGCCCTCGTGTGGCCACCTGTGGGAACTGCA...GGGAACCGGATGAACACCTGGGGGCCCCCTAGTGCTCCCTGGCCTCCCAAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp AGCCTTGGGAGGCCAGGGAGCACTAGGGGGCCCCCAGGTGTTCATCCGGTTCCCCACCCCATACAGTGCTaGAGTCACGTGCTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: SLGRPGSTRGPPGVHPVPHPIQC*SHVLAD
Trigger: ATCGGCCAGCACGTGACTGCAGCACTGTATGGGGTG...GGGAACCGGATGAACACCTGGGGGCCCCCTAGTGCTCCCTGGCCTCCCAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp GGGGCCCCCAGGTGTTCATCCGGTTCCCTTCTAGTCTGGGAGGAGCCGAGGGCAGGTATGACTGGTCGATaGCTTCCCGCTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GAPRCSSGSLLVWEEPRAGMTGR*LPASPG
Trigger: GCCTGGGGAAGCGGGAAGGCATCGACCAGTCATACC...TGCCCTCGGCTCCTCCCAGACTAGAAGGGAACCGGATGAACACCTGGGGGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp AGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAACAGGCTTCGTCCTGCTaGCGTCAGGACCCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: RSRGLRGDVFFRSPVLLEQASSC*RQDPGG
Trigger: GCCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTG...TTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp TTCCCAGAAGACGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGCCGTGGCGAGGTAGTTaGTTGCGCCGCAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: FPEDATTGFVLLPSGPWRPWRGS*LRRRVW
Trigger: CCACACTCTGCGGCGCAAGCAACTACCTCGCCACGG...CCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCGTCTTCTGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp GGAGGCCAGGGAGCACTAGGGGGCCCCCAGGTGTTCATCCGGTTCCCTTCTAGTGGTTCCCTTCTAGTCTaGGAGGAGCCGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGQGALGGPQVFIRFPSSGSLLV*EEPRAG
Trigger: CCCTGCCCTCGGCTCCTCCCAGACTAGAAGGGAACC...ACTAGAAGGGAACCGGATGAACACCTGGGGGCCCCCTAGTGCTCCCTGGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGCACCTCACCCGGAACTaGTCCTTCCACACCTTCCCG +
Preference number: 4 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRHLTRN*SFHTFP
Trigger: CGGGAAGGTGTGGAAGGAGCAGTTCCGGGTGAGGTG...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCCACCTCACCCGGAACTaGTCCTTCCACACCTTCCCG +
Preference number: 4 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFHLTRN*SFHTFP
Trigger: CGGGAAGGTGTGGAAGGAGCAGTTCCGGGTGAGGTG...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGACTCGTGTCCCATCATaGAGGTGGGGTCCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRTRVPS*RWGPSR
Trigger: ACGGCTGGGACCCCACCTGCATGATGGGACACGAGT...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp GCAGCAGAAAGCCTGCGACACGGCAGCTCTGCTCAGTTTTCTCCGTGGGGAAAGCAGGCTTCGTCCTGCTaGCGTCAGGACCCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: AAESLRHGSSAQFSPWGKQASSC*RQDPGG
Trigger: GCCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTG...CTTTCCCCACGGAGAAAACTGAGCAGAGCTGCCGTGTCGCAGGCTTTCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCGTTGACAGGCTCCAGTaGGACTCCCAACTGCCGAGC +
Preference number: 4 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFVDRLQ*DSQLPS
Trigger: GCTCGGCAGTTGGGAGTCCCACTGGAGCCTGTCAAC...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AGCCACAGCCTTGGGAGGCCAGGGAGCACTAGGGGGCCCCCAGGTGTTCATCCGGCTGCAGTCACGTGCTaGCCGATCAAGTACTCGCAT +
Preference number: 4 (lower is better)
Translates to: SHSLGRPGSTRGPPGVHPAAVTC*PIKYSH
Trigger: ATGCGAGTACTTGATCGGCCAGCACGTGACTGCAGC...CGGATGAACACCTGGGGGCCCCCTAGTGCTCCCTGGCCTCCCAAGGCTGTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGCCGTGCGGCAGGCTGTaGACGTTCATGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRPCGRL*TFMFRI
Trigger: GATCCGGAACATGAACGTCCACAGCCTGCCGCACGG...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ACAGCCTTGGGAGGCCAGGGAGCACTAGGGGGCCCCCAGGTGTTCATCCGGTTCAGTGCTGCAGTCACGTaGTGGCCGATCAAGTACTCG +
Preference number: 4 (lower is better)
Translates to: TALGGQGALGGPQVFIRFSAAVT*WPIKYS
Trigger: CGAGTACTTGATCGGCCAGCACGTGACTGCAGCACT...GAACCGGATGAACACCTGGGGGCCCCCTAGTGCTCCCTGGCCTCCCAAGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTGACCACCCCATACAGTaGTGCAGTCACGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRADHPIQ*CSHVLA
Trigger: GGCCAGCACGTGACTGCAGCACTGTATGGGGTGGTC...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp ACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGAGGTATGACTGGTCGATaGCTTCCCGCTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TTGGVAFLVQQVPRAPWRGMTGR*LPASPG
Trigger: GCCTGGGGAAGCGGGAAGGCATCGACCAGTCATACC...TCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GCCCCCAGGTGTTCATCCGGTTCCCTTCTAGTCTGGGAGGAGCCGAGGGCAGGGTGGAGGAGGAGAAGCTaGACCTGGTCCGGGTACATT +
Preference number: 4 (lower is better)
Translates to: APRCSSGSLLVWEEPRAGWRRRS*TWSGYI
Trigger: AATGTACCCGGACCAGGTGCAGCTTCTCCTCCTCCA...CCCTGCCCTCGGCTCCTCCCAGACTAGAAGGGAACCGGATGAACACCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp GTGTTCATCCGGTTCCCTTCTAGTCTGGGAGGAGCCGAGGGCAGGGTCCAGGAGACTCGTGTCCCATCATaGAGGTGGGGTCCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: VFIRFPSSLGGAEGRVQETRVPS*RWGPSR
Trigger: ACGGCTGGGACCCCACCTGCATGATGGGACACGAGT...CTCCTGGACCCTGCCCTCGGCTCCTCCCAGACTAGAAGGGAACCGGATGAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCCAACAGGCTTCGTCCTaGTGCCGTCAGGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPQQASS*CRQDPG
Trigger: GCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTG...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAAGGCCAAGCTGGGGTaGCGACTGTTTATGCCCCGA +
Preference number: 4 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRKAKLG*RLFMPR
Trigger: TCGGGGCATAAACAGTCGCCACCCCAGCTTGGCCTT...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp GGCATAGACAGTGGCCAATCAGATGTCCGGGCTGTGGGAGCGGAGGCCCTGGGGCCCGGGTCTAGGGTTTaGATGTGCTGGAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: GIDSGQSDVRAVGAEALGPGSRV*MCWRMS
Trigger: TGACATCCTCCAGCACATCCAAACCCTAGACCCGGG...CCCCAGGGCCTCCGCTCCCACAGCCCGGACATCTGATTGGCCACTGTCTATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR TCA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTGACTTGGGAAGTTaGCAGGCTCCAGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRSDLGS*QAPVGL
Trigger: GAGTCCCACTGGAGCCTGTCAACTTCCCAAGTCACT...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp GCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGGCGACCACCCCATACAGTaGTGCAGTCACGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AESWWSSRAAQRRAVTLGDHPIQ*CSHVLA
Trigger: GGCCAGCACGTGACTGCAGCACTGTATGGGGTGGTC...GCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp AGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGGTATGACTGGTCGATaGCTTCCCGCTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RSRGLRGDVFFRSPVLLEGMTGR*LPASPG
Trigger: GCCTGGGGAAGCGGGAAGGCATCGACCAGTCATACC...TTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGTGGAGGAGGAGAAGCTaGACCTGGTCCGGGTACATT +
Preference number: 4 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRWRRRS*TWSGYI
Trigger: AATGTACCCGGACCAGGTGCAGCTTCTCCTCCTCCA...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTGGAGGAGGAGAAGCTaGACCTGGTCCGGGTACATT +
Preference number: 4 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFWRRRS*TWSGYI
Trigger: AATGTACCCGGACCAGGTGCAGCTTCTCCTCCTCCA...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGGTGGAGCTCCAGAGCTaGACAAAGGCGTGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRVELQS*TKACSY
Trigger: GTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCAC...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGATGGACAGACAGGTaGAGAGACAGGCCCCTAACG +
Preference number: 4 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRRWTDR*RDRPLT
Trigger: CGTTAGGGGCCTGTCTCTGCACCTGTCTGTCCATCT...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp TTTGATTGGCATAGACAGTGGCCAATCAGATGTCCGGGCTGTGGGAGCGGAGGCGGCGGCACCTTGGGCTaGGTATCGACAGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: FDWHRQWPIRCPGCGSGGGGTLG*VSTGAV
Trigger: GACGGCTCCTGTCGATACGCAGCCCAAGGTGCCGCC...GCCTCCGCTCCCACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTAAGGCCAAGCTGGGGTaGCGACTGTTTATGCCCCGA +
Preference number: 4 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRAKAKLG*RLFMPR
Trigger: TCGGGGCATAAACAGTCGCCACCCCAGCTTGGCCTT...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AGCCAGTGCCGTCCGAACACACGGTCAGGCTTTCCCAGAAGACGCCACAACAGGCCGTGCGGCAGGCTGTaGACGTTCATGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: SQCRPNTRSGFPRRRHNRPCGRL*TFMFRI
Trigger: GATCCGGAACATGAACGTCCACAGCCTGCCGCACGG...CCTGTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp CAGGCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGTCCCGAGGGCTCCGTaGAGACGTCTTCTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: QAESWWSSRAAQRRAVTLVPRAP*RRLLPE
Trigger: CTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGAC...CAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp CGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCGTGGAGTGGCTTTCCTaGTGCAGCAGGTCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: RGLRGDVFFRSPVLLEDSVEWLS*CSRSRG
Trigger: CCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC...GCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp GGCACCTGCCGGGGCGGCAGTGGCCCAGACGCCTACCCAACCTTACTGTACACTGATTGGCATAGACAGTaGCCAATCAGATGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: GTCRGGSGPDAYPTLLYTDWHRQ*PIRCPG
Trigger: GCCCGGACATCTGATTGGCCACTGTCTATGCCAATC...AGTGTACAGTAAGGTTGGGTAGGCGTCTGGGCCACTGCCGCCCCGGCAGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR TCA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCCAGGAGCGTCGACTGTaGGACCTCATGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFQERRL*DLMKTE
Trigger: TTCTGTCTTCATGAGGTCTCACAGTCGACGCTCCTG...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TTCCCAGAAGACGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGCTGGTCCGGGTACATTaGCAGATAGAGATCCAGCGA +
Preference number: 4 (lower is better)
Translates to: FPEDATTGFVLLPSGPWRLVRVH*QIEIQR
Trigger: TCGCTGGATCTCTATCTGGCAATGTACCCGGACCAG...CCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCGTCTTCTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GGCACCTGCCGGGGCGGCAGTGGCCCAGACGCCTACCCAACCTTACTGTACACTTCTAGGGTTTGGATGTaGTGGAGGATGTCAAGCACC +
Preference number: 4 (lower is better)
Translates to: GTCRGGSGPDAYPTLLYTSRVWM*WRMSST
Trigger: GGTGCTTGACATCCTCCAGCACATCCAAACCCTAGA...AGTGTACAGTAAGGTTGGGTAGGCGTCTGGGCCACTGCCGCCCCGGCAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp TCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGCCCACCGCCCCGTGCTaGCCCGGGTCTAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SPQGFQRVNKQQAFNMGEPTAPC*PGSRVW
Trigger: CCAAACCCTAGACCCGGGGCAGCACGGGGCGGTGGG...CTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp ACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGAGCTGCAGTCACGTGCTaGCCGATCAAGTACTCGCAT +
Preference number: 4 (lower is better)
Translates to: TTGGVAFLVQQVPRAPWRAAVTC*PIKYSH
Trigger: ATGCGAGTACTTGATCGGCCAGCACGTGACTGCAGC...TCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GGAGGCCAGGGAGCACTAGGGGGCCCCCAGGTGTTCATCCGGTTCCCTTCTAGTGGTGGAAGTAAAGCCTaGCTTGGAGGAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GGQGALGGPQVFIRFPSSGGSKA*LGGGEA
Trigger: AGCTTCTCCTCCTCCAAGCCAGGCTTTACTTCCACC...ACTAGAAGGGAACCGGATGAACACCTGGGGGCCCCCTAGTGCTCCCTGGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCCGGGTCTAGGGTTTaGATGTGCTGGAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRAPGSRV*MCWRMS
Trigger: TGACATCCTCCAGCACATCCAAACCCTAGACCCGGG...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGTCCCATCATGCAGGTaGGGTCCCAGCCGTAGATCA +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPVPSCR*GPSRRS
Trigger: TGATCTACGGCTGGGACCCCACCTGCATGATGGGAC...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AGCCAGTGCCGTCCGAACACACGGTCAGGCTTTCCCAGAAGACGCCACAACAGGGTCCCATCATGCAGGTaGGGTCCCAGCCGTAGATCA +
Preference number: 4 (lower is better)
Translates to: SQCRPNTRSGFPRRRHNRVPSCR*GPSRRS
Trigger: TGATCTACGGCTGGGACCCCACCTGCATGATGGGAC...CCTGTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGGCGCACTACTGGTGGAGTaGCTTTCCTGGTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AESWWSSRAAQRRAVTLGALLVE*LSWCSR
Trigger: CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGC...GCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp CAGAAGACGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGCTTGGCCAGGTGCTGTGAGTaGTTACGTTTCCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: QKTPQQASSCCRQDPGGLARCCE*LRFQMQ
Trigger: CTGCATCTGGAAACGTAACCACTCACAGCACCTGGC...CAAGCCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCGTCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp ACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGAACTCTTCCAACCAATTaGCGTAGTCGGTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TTGGVAFLVQQVPRAPWRTLPTN*RSRWGC
Trigger: ACAGCCCCACCGACTACGTCAATTGGTTGGAAGAGT...TCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp AGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAAGTGACTTGGGAAGTTaGCAGGCTCCAGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: RSRGLRGDVFFRSPVLLESDLGS*QAPVGL
Trigger: GAGTCCCACTGGAGCCTGTCAACTTCCCAAGTCACT...TTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp CAGGCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGCGGGCCAGGTGCTGTaGGTGGTTACGTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: QAESWWSSRAAQRRAVTLAGQVL*VVTFPD
Trigger: ATCTGGAAACGTAACCACTCACAGCACCTGGCCCGC...CAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGGCAGCCGCCGGCAGGTaGTGGAGACACGGCCGATGT +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMAAAGR*WRHGRC
Trigger: ACATCGGCCGTGTCTCCAGCACCTGCCGGCGGCTGC...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330622.9
ENST00000622495.5
CDS-3UTR GCA 90 bp AGCCACAGCCTTGGGAGGCCAGGGAGCACTAGGGGGCCCCCAGGTGTTCATCCGTCTTTCACTGTCAGCTaGTTGCCTTTCCCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SHSLGRPGSTRGPPGVHPSFTVS*LPFPKA
Trigger: TGCTTTTGGGAAAGGCAAGCAGCTGACAGTGAAAGA...CGGATGAACACCTGGGGGCCCCCTAGTGCTCCCTGGCCTCCCAAGGCTGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGGATCTCCAGCTCTaGGTTTGGGATGTAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRAPDLQL*VWDVVS
Trigger: ACTCACTACATCCCAAACGCAGAGCTGGAGATCCGG...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp CAGGAATTTGATTGGCATAGACAGTGGCCAATCAGATGTCCGGGCTGTGGGAGCTCTCCACCTCAGCCTTaGCCTGGGCTGGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: QEFDWHRQWPIRCPGCGSSPPQP*PGLAPA
Trigger: GGCAGGTGCCAGCCCAGGGCAAGGCTGAGGTGGAGA...GCTCCCACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAAATTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTGCCCCTTCTGCGCCTTaGCACCACCTTAATAAGAAG +
Preference number: 4 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRAAPSAP*HHLNKK
Trigger: CTTCTTATTAAGGTGGTGCCAAGGCGCAGAAGGGGC...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGCTGCAGTCACGTGCTaGCCGATCAAGTACTCGCAT +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPAAVTC*PIKYSH
Trigger: ATGCGAGTACTTGATCGGCCAGCACGTGACTGCAGC...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCAGGAGCTGGTATGACTaGTCGATGCCTTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPRSWYD*SMPSRF
Trigger: GAAGCGGGAAGGCATCGACCAGTCATACCAGCTCCT...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp TTGATTGGCATAGACAGTGGCCAATCAGATGTCCGGGCTGTGGGAGCGGAGGCCGTCCCATCATGCAGGTaGGGTCCCAGCCGTAGATCA +
Preference number: 4 (lower is better)
Translates to: LIGIDSGQSDVRAVGAEAVPSCR*GPSRRS
Trigger: TGATCTACGGCTGGGACCCCACCTGCATGATGGGAC...GGCCTCCGCTCCCACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp CGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCGTCCCATCATGCAGGTaGGGTCCCAGCCGTAGATCA +
Preference number: 4 (lower is better)
Translates to: RGLRGDVFFRSPVLLEDSVPSCR*GPSRRS
Trigger: TGATCTACGGCTGGGACCCCACCTGCATGATGGGAC...GCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TTTGATTGGCATAGACAGTGGCCAATCAGATGTCCGGGCTGTGGGAGCGGAGGCCCGTGCGGCAGGCTGTaGACGTTCATGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: FDWHRQWPIRCPGCGSGGPCGRL*TFMFRI
Trigger: GATCCGGAACATGAACGTCCACAGCCTGCCGCACGG...GCCTCCGCTCCCACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTAACCAGCACTACTGGTaGAGTGGCTTTCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRANQHYW*SGFPGA
Trigger: TGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTT...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGGCAACCAGCACTACTaGTGGAGTGGCTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RSRGLRGDVFFRSPVLLEGNQHY*WSGFPG
Trigger: ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCC...TTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGGCAACCAGCACTACTaGTGGAGTGGCTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPGNQHY*WSGFPG
Trigger: ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCC...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGTGGCTTTCCAAACCTTaGTCACCCCAGGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRWLSKP*SPQGFQ
Trigger: TTGGAAACCCTGGGGTGACCAAGGTTTGGAAAGCCA...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp CAGGAATTTGATTGGCATAGACAGTGGCCAATCAGATGTCCGGGCTGTGGGAGCGCCAGGGCGGCACCTTaGGCTGCGTATCGACAGGAG +
Preference number: 4 (lower is better)
Translates to: QEFDWHRQWPIRCPGCGSARAAP*AAYRQE
Trigger: CTCCTGTCGATACGCAGCCCAAGGTGCCGCCCTGGC...GCTCCCACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAAATTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp GGTCCAGGAGGCAGGACTTACAGGAATTTGATTGGCATAGACAGTGGCCAATCACTGCCGGGGCGGCAGTaGCCCAGACGCCTACCCAAC +
Preference number: 4 (lower is better)
Translates to: GPGGRTYRNLIGIDSGQSLPGRQ*PRRLPN
Trigger: GTTGGGTAGGCGTCTGGGCCACTGCCGCCCCGGCAG...TGATTGGCCACTGTCTATGCCAATCAAATTCCTGTAAGTCCTGCCTCCTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR TCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCACTCTTCCAACCAATTaGCGTAGTCGGTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPTLPTN*RSRWGC
Trigger: ACAGCCCCACCGACTACGTCAATTGGTTGGAAGAGT...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp CAGAAGACGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGCTTGGGGTGTGAGATTTCTTaGGGCTCCACGTTATATTCC +
Preference number: 4 (lower is better)
Translates to: QKTPQQASSCCRQDPGGLGCEIS*GSTLYS
Trigger: GGAATATAACGTGGAGCCTCAAGAAATCTCACACCC...CAAGCCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCGTCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCGGGTGTGAGATTTCTTaGGGCTCCACGTTATATTCC +
Preference number: 4 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFGCEIS*GSTLYS
Trigger: GGAATATAACGTGGAGCCTCAAGAAATCTCACACCC...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp GCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGGCAGCCTTCCCTTGCTATaGAGTGGTCTCAGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: AESWWSSRAAQRRAVTLGSLPLL*SGLRWL
Trigger: AAGCCACCTGAGACCACTTCATAGCAAGGGAAGGCT...GCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp GGCACCTGCCGGGGCGGCAGTGGCCCAGACGCCTACCCAACCTTACTGTACACTAAGGGAGACTCACACTaGAGGCATTCTTGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: GTCRGGSGPDAYPTLLYTKGDSH*RHSCLL
Trigger: TAAGAGACAAGAATGCCTTCAGTGTGAGTCTCCCTT...AGTGTACAGTAAGGTTGGGTAGGCGTCTGGGCCACTGCCGCCCCGGCAGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp CACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTCCCACCGCCCCGTGCTaGCCCGGGTCTAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: HTVFKLSRRQPALLVEWLPTAPC*PGSRVW
Trigger: CCAAACCCTAGACCCGGGGCAGCACGGGGCGGTGGG...AAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp CGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTCCCACCGCCCCGTGCTaGCCCGGGTCTAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RYLNLVGGNQHYWWSGFPPTAPC*PGSRVW
Trigger: CCAAACCCTAGACCCGGGGCAGCACGGGGCGGTGGG...AGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp AGCCAGTGCCGTCCGAACACACGGTCAGGCTTTCCCAGAAGACGCCACAACAGGCAAGTTTTCTTGGGCTaGGTATCGACAGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: SQCRPNTRSGFPRRRHNRQVFLG*VSTGAV
Trigger: GACGGCTCCTGTCGATACGCAGCCCAAGAAAACTTG...CCTGTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp ACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGAGAGCAACATTGTCTTTaGAGCTGGGGAAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: TTGGVAFLVQQVPRAPWREQHCL*SWGRAH
Trigger: GTGTGCTCTTCCCCAGCTGCAAAGACAATGTTGCTC...TCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ACATTCAAGGTTAAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTAGTTGCCGCCGGCAGGTGCTaGAGACACGGCCGATGTCGG +
Preference number: 4 (lower is better)
Translates to: TFKVKVAARPRLNRGEVVAAGRC*RHGRCR
Trigger: CCGACATCGGCCGTGTCTCCAGCACCTGCCGGCGGC...AACTACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTTAACCTTGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp CGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGGAGAAGCTGCACCTaGTCCGGGTACATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RGLRGDVFFRSPVLLEDSRRSCT*SGYIAR
Trigger: TCTGGCAATGTACCCGGACCAGGTGCAGCTTCTCCT...GCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp GCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGGCCTCCAGCTCTGCGTTTaGGATGTAGTGAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: AESWWSSRAAQRRAVTLGLQLCV*DVVSAS
Trigger: ACTGGCACTCACTACATCCCAAACGCAGAGCTGGAG...GCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCAACCAGCACTACTGGTaGAGTGGCTTTCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPNQHYW*SGFPGA
Trigger: TGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTT...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCCCAGAAGACGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGCATTGTCTTTGCAGCTaGGGAAGAGCACACGGTATT +
Preference number: 4 (lower is better)
Translates to: FPEDATTGFVLLPSGPWRHCLCS*GRAHGI
Trigger: AATACCGTGTGCTCTTCCCCAGCTGCAAAGACAATG...CCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCGTCTTCTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
3UTR CAA 72 bp CAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGCTaGGAAAAGCAGATTCCAACACGCACATCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QASSCCRQDPGG*EKQIPTRTSPF
Trigger: GAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAAGCCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp CTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGAGTGACTTGGGAAGTTaGCAGGCTCCAGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: LSRRQPALLVEWLSWCSRSDLGS*QAPVGL
Trigger: GAGTCCCACTGGAGCCTGTCAACTTCCCAAGTCACT...CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp TTCCCAGAAGACGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGCACCTTAATAAGAAGTaGCTTGGGAAGTTGACAGGC +
Preference number: 4 (lower is better)
Translates to: FPEDATTGFVLLPSGPWRHLNKK*LGKLTG
Trigger: GCCTGTCAACTTCCCAAGTCACTTCTTATTAAGGTG...CCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCGTCTTCTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCCACCTTAATAAGAAGTaGCTTGGGAAGTTGACAGGC +
Preference number: 4 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFHLNKK*LGKLTG
Trigger: GCCTGTCAACTTCCCAAGTCACTTCTTATTAAGGTG...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCGACTGTGAGACCTCATaGAGACAGAATGTCACAAAC +
Preference number: 4 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFDCETS*RQNVTN
Trigger: GTTTGTGACATTCTGTCTTCATGAGGTCTCACAGTC...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp CGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCCAGGAGCGTCGACTGTaGGACCTCATGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: RGLRGDVFFRSPVLLEDSQERRL*DLMKTE
Trigger: TTCTGTCTTCATGAGGTCTCACAGTCGACGCTCCTG...GCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGGCCAAGGAAATGTTCTaGGACAAATGCAGACAGACA +
Preference number: 4 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRAKEMF*DKCRQT
Trigger: TGTCTGTCTGCATTTGTCTCAGAACATTTCCTTGGC...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGCAGCCGCCGGCAGGTaGTGGAGACACGGCCGATGT +
Preference number: 4 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSEAAAGR*WRHGRC
Trigger: ACATCGGCCGTGTCTCCAGCACCTGCCGGCGGCTGC...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330622.9
ENST00000622495.5
CDS-3UTR GCA 90 bp CCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTCCTCTCTAGACTCCACACCTTCCCGCTaGTCTGGCACAGCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: PVLLEDSSSSKGAMSSLDSTPSR*SGTARA
Trigger: TGCGCGAGCTGTGCCAGAGCAGCGGGAAGGTGTGGA...GTCTAGAGAGGACATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp GTGTTCATCCGGTTCCCTTCTAGTCTGGGAGGAGCCGAGGGCAGGGTCCAGGAGTTTTTGCGCTCAATGTaGTCTAGAGTGTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: VFIRFPSSLGGAEGRVQEFLRSM*SRVCCT
Trigger: GGTGCAGCACACTCTAGAGCACATTGAGCGCAAAAA...CTCCTGGACCCTGCCCTCGGCTCCTCCCAGACTAGAAGGGAACCGGATGAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGCAACAGGCTTCGTCCTaGTGCCGTCAGGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMQQASS*CRQDPG
Trigger: GCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTG...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp CGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTACCTTCCCGCTGCTCTaGCACAGCTCGCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RYLNLVGGNQHYWWSGFPTFPLL*HSSRSR
Trigger: GCGGCTGCGCGAGCTGTGCCAGAGCAGCGGGAAGGT...AGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGGAAATTACCTTCCCGCTGCTCTaGCACAGCTCGCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TQSSLGTEHVPQRNQKEITFPLL*HSSRSR
Trigger: GCGGCTGCGCGAGCTGTGCCAGAGCAGCGGGAAGGT...AATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACCTTCCCGCTGCTCTaGCACAGCTCGCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLTFPLL*HSSRSR
Trigger: GCGGCTGCGCGAGCTGTGCCAGAGCAGCGGGAAGGT...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTACGATGCTGTCAATTTaGGCCTGGATGTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRATMLSI*AWMSLR
Trigger: CCTCAAAGACATCCAGGCCCAAATTGACAGCATCGT...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp CGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCGGTGGAAGTAAAGCCTaGCTTGGAGGAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RGLRGDVFFRSPVLLEDSGGSKA*LGGGEA
Trigger: AGCTTCTCCTCCTCCAAGCCAGGCTTTACTTCCACC...GCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AGCCAGTGCCGTCCGAACACACGGTCAGGCTTTCCCAGAAGACGCCACAACAGGGTGATACAGGCTTCCTaGAGCCCCATGAAGCATTCA +
Preference number: 4 (lower is better)
Translates to: SQCRPNTRSGFPRRRHNRVIQAS*SPMKHS
Trigger: TGAATGCTTCATGGGGCTCCAGGAAGCCTGTATCAC...CCTGTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGTCCTCAAACGAAATTaGGCAGGCCATTTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPVLKRN*AGHLRG
Trigger: ACCACGCAAATGGCCTGCCCAATTTCGTTTGAGGAC...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTTGCAAACATGACGCCTaGCAAAACCGGTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRACKHDA*QNRSDS
Trigger: AGAATCAGACCGGTTTTGCCAGGCGTCATGTTTGCA...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp CTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGACTCTTCCAACCAATTaGCGTAGTCGGTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSRRQPALLVEWLSWCSRTLPTN*RSRWGC
Trigger: ACAGCCCCACCGACTACGTCAATTGGTTGGAAGAGT...CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp CGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGTGCCAGTAAACTCTaGGAAATAGCGTCCCACGTC +
Preference number: 4 (lower is better)
Translates to: RGLRGDVFFRSPVLLEDSSASKL*EIASHV
Trigger: GACGTGGGACGCTATTTCTCAGAGTTTACTGGCACT...GCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTGACTGTGAGACCTCATaGAGACAGAATGTCACAAAC +
Preference number: 4 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRADCETS*RQNVTN
Trigger: GTTTGTGACATTCTGTCTTCATGAGGTCTCACAGTC...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCAAGTTGCTGGTAGTCTaGGTTCACTTACTTGGAGTA +
Preference number: 4 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFKLLVV*VHLLGV
Trigger: TACTCCAAGTAAGTGAACTCAGACTACCAGCAACTT...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp CAGGCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGTCTAGGGTTTGGATGTaGTGGAGGATGTCAAGCACC +
Preference number: 4 (lower is better)
Translates to: QAESWWSSRAAQRRAVTLSRVWM*WRMSST
Trigger: GGTGCTTGACATCCTCCAGCACATCCAAACCCTAGA...CAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp TTCCCAGAAGACGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGTCTCTCTTTCTAACCTaGCACATTCAAACAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FPEDATTGFVLLPSGPWRSLFLT*HIQTGL
Trigger: AAGGCCTGTTTGAATGTGGCAGGTTAGAAAGAGAGA...CCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCGTCTTCTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGTCTCTCTTTCTAACCTaGCACATTCAAACAGGCCTT +
Preference number: 4 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRSLFLT*HIQTGL
Trigger: AAGGCCTGTTTGAATGTGGCAGGTTAGAAAGAGAGA...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGTCGGAAAGGAGCCAGTaGCGTCCGAACACACGGTCA +
Preference number: 4 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKSERSQ*RPNTRS
Trigger: TGACCGTGTGTTCGGACGGCACTGGCTCCTTTCCGA...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCGGTTACGTTTCCAGATaGAGGTTCAAATCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFGYVSR*RFKSFD
Trigger: GTCAAAGGATTTGAACCTGCATCTGGAAACGTAACC...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGCCTTGGCGGGCCAGGTaGTGTGAGTGGTTACGTTTC +
Preference number: 4 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKPWRAR*CEWLRF
Trigger: GAAACGTAACCACTCACAGCACCTGGCCCGCCAAGG...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCATTGGGCAGGCCATTTaGGTGGTTTCTCTGGATAAG +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPIGQAI*VVSLDK
Trigger: CTTATCCAGAGAAACCACGCAAATGGCCTGCCCAAT...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGGGAAAGCAAAGAGATaGGACATCAGCAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPGKAKR*DISSRK
Trigger: CTTTCTGCTGCTGATGTCGCATCTCTTTGCTTTCCC...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCCGACTCATAGTCATCTaGCTGCTGAAGAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPRLIVI*LLKKGL
Trigger: AAGGCCTTTCTTCAGCAGCCAGATGACTATGAGTCG...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCCTGTCAATTTGGGCCTaGATGTCTTTGAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPLSIWA*MSLRLM
Trigger: CATCAGCCTCAAAGACATCCAGGCCCAAATTGACAG...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGAAGGCCAAGCTGGGGTaGCGACTGTTTATGCCCCGA +
Preference number: 4 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKKAKLG*RLFMPR
Trigger: TCGGGGCATAAACAGTCGCCACCCCAGCTTGGCCTT...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGGTTGACAGGCTCCAGTaGGACTCCCAACTGCCGAGC +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMVDRLQ*DSQLPS
Trigger: GCTCGGCAGTTGGGAGTCCCACTGGAGCCTGTCAAC...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp CTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGCTCCAGCTCTGCGTTTaGGATGTAGTGAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSRRQPALLVEWLSWCSRLQLCV*DVVSAS
Trigger: ACTGGCACTCACTACATCCCAAACGCAGAGCTGGAG...CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp GCAGCTGGGGAAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTAGTGGAGTGGCTTTCCTaGTGCAGCAGGTCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: AAGEEHTVFKLSRRQPALVEWLS*CSRSRG
Trigger: CCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC...TAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTTCCCCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTGGCAGGCCGAGAGTTaGTGGAGCTCCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMWQAES*WSSRAA
Trigger: TGCAGCTCTGGAGCTCCACCAACTCTCGGCCTGCCA...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp AGCCAGTGCCGTCCGAACACACGGTCAGGCTTTCCCAGAAGACGCCACAACAGGAATACTGCATGCAGATaGACAGACAGGTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SQCRPNTRSGFPRRRHNRNTACR*TDRCRD
Trigger: GTCTCTGCACCTGTCTGTCCATCTGCATGCAGTATT...CCTGTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTATTCTACTCAAGTCATaGCTGGGCTTTCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRAILLKS*LGFLSS
Trigger: TGAGGACAGAAAGCCCAGCCATGACTTGAGTAGAAT...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGGCCAACTATGGCCTGTaGGCACCATCCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMANYGL*APSHLQ
Trigger: CTGCAGGTGGGATGGTGCCCACAGGCCATAGTTGGC...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR CAA 72 bp CTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTaGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LRGDVFFRSPVL*EDSSSSKGAMS
Trigger: GGACATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
3UTR CAA 72 bp CGAGGGCAGGGTCCAGGAGGCAGGACTTACAGGAATTaGATTGGCATAGACAGTGGCCAATCAGATGTCCGG +
Preference number: 4 (lower is better)
Translates to: RGQGPGGRTYRN*IGIDSGQSDVR
Trigger: CCGGACATCTGATTGGCCACTGTCTATGCCAATCAAATTCCTGTAAGTCCTGCCTCCTGGACCCTGCCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR TCA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCCTGCGAATCAAAACCTaGTGCATATATAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFLRIKT*CIYKLR
Trigger: CCTCAACTTATATATGCATCAGGTTTTGATTCGCAG...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp CTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGAGAGCAGAGACATGCTaGTTGGGATTCCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LSRRQPALLVEWLSWCSRRAETC*LGFLFC
Trigger: GCAGAACAGGAATCCCAATCAGCATGTCTCTGCTCT...CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCGAAGACCATGGAGTATaGCTTCTAAGAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFEDHGV*LLRANI
Trigger: AATGTTTGCTCTTAGAAGTCATACTCCATGGTCTTC...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp CAGGCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGCTTCCTGGAGCCCCATaGAGCATTCATGAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: QAESWWSSRAAQRRAVTLLPGAP*SIHEER
Trigger: TCTTTCTTCATGAATGCTTCATGGGGCTCCAGGAAG...CAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGGCTCTTTCACTGTCAGCTaGTTGCCTTTCCCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: AESWWSSRAAQRRAVTLGSFTVS*LPFPKA
Trigger: TGCTTTTGGGAAAGGCAAGCAGCTGACAGTGAAAGA...GCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCGACCACCCCATACAGTaGTGCAGTCACGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFDHPIQ*CSHVLA
Trigger: GGCCAGCACGTGACTGCAGCACTGTATGGGGTGGTC...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGGTATGACTGGTCGATaGCTTCCCCTTCTGCGCCTT +
Preference number: 4 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKGMTGR*LPLLRL
Trigger: AAGGCGCAGAAGGGGAAGGCATCGACCAGTCATACC...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550180.5
CDS-3UTR GCA 90 bp GCAGCTGGGGAAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTAGCGACACGGCAGCTCTaGTCAGTTTTCTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: AAGEEHTVFKLSRRQPALATRQL*SVFSVG
Trigger: CCCCACGGAGAAAACTGAGCAGAGCTGCCGTGTCGC...TAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTTCCCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGAGGATTGCAGTACTaGTCAATATATACAGCACCT +
Preference number: 4 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRRGLQY*SIYTAP
Trigger: AGGTGCTGTATATATTGACCAGTACTGCAATCCTCT...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCCCAGAAGACGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGAGAGGATTGCAGTACTaGTCAATATATACAGCACCT +
Preference number: 4 (lower is better)
Translates to: FPEDATTGFVLLPSGPWRRGLQY*SIYTAP
Trigger: AGGTGCTGTATATATTGACCAGTACTGCAATCCTCT...CCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCGTCTTCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp CTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGATGGCATCCAGCACCTaGCTCTGGAGTTCTATTTCC +
Preference number: 4 (lower is better)
Translates to: LSRRQPALLVEWLSWCSRMASST*LWSSIS
Trigger: GGAAATAGAACTCCAGAGCCAGGTGCTGGATGCCAT...CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCCAGAGACATGCTGATTaGGATTCCTGTTCTGCGAAT +
Preference number: 4 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPQRHAD*DSCSAN
Trigger: ATTCGCAGAACAGGAATCCCAATCAGCATGTCTCTG...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp GCAACATTCAAGGTTAAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTAGTTGACAGGCTCCAGTaGGACTCCCAACTGCCGAGC +
Preference number: 4 (lower is better)
Translates to: ATFKVKVAARPRLNRGEVVDRLQ*DSQLPS
Trigger: GCTCGGCAGTTGGGAGTCCCACTGGAGCCTGTCAAC...TACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTTAACCTTGAATGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp CAGGAATTTGATTGGCATAGACAGTGGCCAATCAGATGTCCGGGCTGTGGGAGCAGGAGAAGCTGCACCTaGTCCGGGTACATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: QEFDWHRQWPIRCPGCGSRRSCT*SGYIAR
Trigger: TCTGGCAATGTACCCGGACCAGGTGCAGCTTCTCCT...GCTCCCACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAAATTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp GCAGCAGAAAGCCTGCGACACGGCAGCTCTGCTCAGTTTTCTCCGTGGGGAAAGAAACTCCAGATCTTCTaGATACCGGATCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AAESLRHGSSAQFSPWGKKLQIF*IPDLQL
Trigger: GAGCTGGAGATCCGGTATCCAGAAGATCTGGAGTTT...CTTTCCCCACGGAGAAAACTGAGCAGAGCTGCCGTGTCGCAGGCTTTCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGGTCCCGAGGGCTCCGTaGAGACGTCTTCTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLVPRAP*RRLLPE
Trigger: CTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGAC...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp CGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCCATTGTCTTTGCAGCTaGGGAAGAGCACACGGTATT +
Preference number: 4 (lower is better)
Translates to: RGLRGDVFFRSPVLLEDSHCLCS*GRAHGI
Trigger: AATACCGTGTGCTCTTCCCCAGCTGCAAAGACAATG...GCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp CCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTCCTCTCTAGACCAGGCCGAGAGTTGGTaGAGCTCCAGAGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: PVLLEDSSSSKGAMSSLDQAESW*SSRAAQ
Trigger: TTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTG...GTCTAGAGAGGACATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGCAGGCCGAGAGTTGGTaGAGCTCCAGAGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMQAESW*SSRAAQ
Trigger: TTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTG...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp CCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTCCTCTCTAGACAGCTCGCTTGAGAACTaGCAGGCCGAGAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PVLLEDSSSSKGAMSSLDSSLEN*QAESWW
Trigger: CCACCAACTCTCGGCCTGCCAGTTCTCAAGCGAGCT...GTCTAGAGAGGACATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp AGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAAGCAGGCATTCAACATaGGTGAGAATACTGCATGCA +
Preference number: 4 (lower is better)
Translates to: RSRGLRGDVFFRSPVLLESRHST*VRILHA
Trigger: TGCATGCAGTATTCTCACCCATGTTGAATGCCTGCT...TTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GCAGCTGGGGAAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACAATCCTCCCAACCTTaGCGGGCCAGGTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: AAGEEHTVFKLSRRQPALQSSQP*RARCCE
Trigger: CTCACAGCACCTGGCCCGCCAAGGTTGGGAGGATTG...TAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTTCCCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp ACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATCAATCCTCCCAACCTTaGCGGGCCAGGTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: TLVTPGFPKGKQAAGIQHQSSQP*RARCCE
Trigger: CTCACAGCACCTGGCCCGCCAAGGTTGGGAGGATTG...ATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCGGGGTCAGCCAACTATaGCCTGTGGGCACCATCCCA +
Preference number: 4 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFGVSQL*PVGTIP
Trigger: TGGGATGGTGCCCACAGGCCATAGTTGGCTGACCCC...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCATGATTCACCTGCCTTaGAGGCCAAGCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFMIHLP*RPSWGG
Trigger: GCCACCCCAGCTTGGCCTTCAAGGCAGGTGAATCAT...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp CGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCTTCCATTATCATGGATaGTTCACCTGCCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: RGLRGDVFFRSPVLLEDSFHYHG*FTCLEG
Trigger: GCCTTCAAGGCAGGTGAATCATCCATGATAATGGAA...GCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp GCAGCAGAAAGCCTGCGACACGGCAGCTCTGCTCAGTTTTCTCCGTGGGGAAAGGACTGTGAGACCTCATaGAGACAGAATGTCACAAAC +
Preference number: 4 (lower is better)
Translates to: AAESLRHGSSAQFSPWGKDCETS*RQNVTN
Trigger: GTTTGTGACATTCTGTCTTCATGAGGTCTCACAGTC...CTTTCCCCACGGAGAAAACTGAGCAGAGCTGCCGTGTCGCAGGCTTTCTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp AGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAAGTGAATACAAAGAATaGTTACAGGAGCGTCGACTG +
Preference number: 4 (lower is better)
Translates to: RSRGLRGDVFFRSPVLLESEYKE*LQERRL
Trigger: CAGTCGACGCTCCTGTAATCATTCTTTGTATTCACT...TTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp ACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGAGAAGACCATGGAGTATaGCTTCTAAGAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: TTGGVAFLVQQVPRAPWREDHGV*LLRANI
Trigger: AATGTTTGCTCTTAGAAGTCATACTCCATGGTCTTC...TCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTTCCACACCTTCCCGCTaGTCTGGCACAGCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGSTPSR*SGTARA
Trigger: TGCGCGAGCTGTGCCAGAGCAGCGGGAAGGTGTGGA...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGATCTAACCCAGCTTTTTaGCGAACTTTATACTCTTCC +
Preference number: 4 (lower is better)
Translates to: TTGGVAFLVQQVPRAPWRSNPAF*RTLYSS
Trigger: GGAAGAGTATAAAGTTCGGCAAAAAGCTGGGTTAGA...TCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp GCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGGCTTGGGATTCCTGTTCTaGGAATCAAAACCTGATGCA +
Preference number: 4 (lower is better)
Translates to: AESWWSSRAAQRRAVTLGLGFLF*ESKPDA
Trigger: TGCATCAGGTTTTGATTCGCAGAACAGGAATCCCAA...GCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp ACTTACAGGAATTTGATTGGCATAGACAGTGGCCAATCAGATGTCCGGGCTGTGGACCACCCCATACAGTaGTGCAGTCACGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TYRNLIGIDSGQSDVRAVDHPIQ*CSHVLA
Trigger: GGCCAGCACGTGACTGCAGCACTGTATGGGGTGGTC...CACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAAATTCCTGTAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp CACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTGGTATGACTGGTCGATaGCTTCCCGCTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HTVFKLSRRQPALLVEWLGMTGR*LPASPG
Trigger: GCCTGGGGAAGCGGGAAGGCATCGACCAGTCATACC...AAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGCTGGTCCGGGTACATTaGCAGATAGAGATCCAGCGA +
Preference number: 4 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKLVRVH*QIEIQR
Trigger: TCGCTGGATCTCTATCTGGCAATGTACCCGGACCAG...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGCCCACCGCCCCGTGCTaGCCCGGGTCTAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMPTAPC*PGSRVW
Trigger: CCAAACCCTAGACCCGGGGCAGCACGGGGCGGTGGG...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAACTCGTGTCCCATCATaGAGGTGGGGTCCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSETRVPS*RWGPSR
Trigger: ACGGCTGGGACCCCACCTGCATGATGGGACACGAGT...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGGTGGAGCTCCAGAGCTaGACAAAGGCGTGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: SPQGFQRVNKQQAFNMGEVELQS*TKACSY
Trigger: GTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCAC...CTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp AGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAACAGAAAACCAACAATTaGAACTCTCAGCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: RSRGLRGDVFFRSPVLLEQKTNN*NSQHAQ
Trigger: CTGAGCATGCTGAGAGTTGCAATTGTTGGTTTTCTG...TTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTAAAAACACGAAGAGCTaGATCTTGATCATCATGGAC +
Preference number: 4 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRAKNTKS*ILIIMD
Trigger: GTCCATGATGATCAAGATGCAGCTCTTCGTGTTTTT...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp CTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGAAAGGACATAGTTCATaGCATCCAGCACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LSRRQPALLVEWLSWCSRKGHSS*HPAPGS
Trigger: AGAGCCAGGTGCTGGATGCCATGAACTATGTCCTTT...CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp CCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTCCTCTCTAGACGCTGCAGTCACGTGCTaGCCGATCAAGTACTCGCAT +
Preference number: 4 (lower is better)
Translates to: PVLLEDSSSSKGAMSSLDAAVTC*PIKYSH
Trigger: ATGCGAGTACTTGATCGGCCAGCACGTGACTGCAGC...GTCTAGAGAGGACATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGAGTCTCTCAGGAGCTaGTATGACTGGTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKESLRS*YDWSMP
Trigger: AGGCATCGACCAGTCATACCAGCTCCTGAGAGACTC...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATTCTGGACACATCGTATACAGCACAGCCATTCAAATCAACGGCAACAGAACGCGTGGAGTGGCTTTCCTaGTGCAGCAGGTCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: ILDTSYTAQPFKSTATERVEWLS*CSRSRG
Trigger: CCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC...GCGTTCTGTTGCCGTTGATTTGAATGGCTGTGCTGTATACGATGTGTCCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp TCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGGGCAACCAGCACTACTaGTGGAGTGGCTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SPQGFQRVNKQQAFNMGEGNQHY*WSGFPG
Trigger: ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCC...CTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAATGGCAGGCCGAGAGTTaGTGGAGCTCCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSEWQAES*WSSRAA
Trigger: TGCAGCTCTGGAGCTCCACCAACTCTCGGCCTGCCA...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GCAGCTGGGGAAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTAGAGCTCAGTGGTTCCTaGAGACTCAGGGACCACCTG +
Preference number: 4 (lower is better)
Translates to: AAGEEHTVFKLSRRQPALELSGS*RLRDHL
Trigger: CAGGTGGTCCCTGAGTCTCCAGGAACCACTGAGCTC...TAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTTCCCCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp CACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTATGATTCACCTGCCTTaGAGGCCAAGCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HTVFKLSRRQPALLVEWLMIHLP*RPSWGG
Trigger: GCCACCCCAGCTTGGCCTTCAAGGCAGGTGAATCAT...AAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAATGATTCACCTGCCTTaGAGGCCAAGCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSEMIHLP*RPSWGG
Trigger: GCCACCCCAGCTTGGCCTTCAAGGCAGGTGAATCAT...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp AGCCAGTGCCGTCCGAACACACGGTCAGGCTTTCCCAGAAGACGCCACAACAGGCTGCGAATCAAAACCTaGTGCATATATAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SQCRPNTRSGFPRRRHNRLRIKT*CIYKLR
Trigger: CCTCAACTTATATATGCATCAGGTTTTGATTCGCAG...CCTGTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGAGAGCAGAGACATGCTaGTTGGGATTCCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKRAETC*LGFLFC
Trigger: GCAGAACAGGAATCCCAATCAGCATGTCTCTGCTCT...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp CGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGTGAATACAAAGAATaGTTACAGGAGCGTCGACTG +
Preference number: 4 (lower is better)
Translates to: RGLRGDVFFRSPVLLEDSSEYKE*LQERRL
Trigger: CAGTCGACGCTCCTGTAATCATTCTTTGTATTCACT...GCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp CTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGGCCAAGGAAATGTTCTaGGACAAATGCAGACAGACA +
Preference number: 4 (lower is better)
Translates to: LSRRQPALLVEWLSWCSRAKEMF*DKCRQT
Trigger: TGTCTGTCTGCATTTGTCTCAGAACATTTCCTTGGC...CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp CCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTCCTCTCTAGACCACGCACACGCAGTATaGCCTGGGTTTCCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: PVLLEDSSSSKGAMSSLDHAHAV*PGFPLY
Trigger: ATAAAGGGGAAACCCAGGTCATACTGCGTGTGCGTG...GTCTAGAGAGGACATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp ACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCGCAGAGTGTGGGTGTaGACAGCTGGAGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: TRYLNLVGGNQHYWWSGFRRVWV*TAGAQW
Trigger: CCACTGAGCTCCAGCTGTTCACACCCACACTCTGCG...AAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp ACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCACCTCACCCGGAACTaGTCCTTCCACACCTTCCCG +
Preference number: 4 (lower is better)
Translates to: TRYLNLVGGNQHYWWSGFHLTRN*SFHTFP
Trigger: CGGGAAGGTGTGGAAGGAGCAGTTCCGGGTGAGGTG...AAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATTGGAGGAGGAGAAGCTaGACCTGGTCCGGGTACATT +
Preference number: 4 (lower is better)
Translates to: TLVTPGFPKGKQAAGIQHWRRRS*TWSGYI
Trigger: AATGTACCCGGACCAGGTGCAGCTTCTCCTCCTCCA...ATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGAGCAACATTGTCTTTaGAGCTGGGGAAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKEQHCL*SWGRAH
Trigger: GTGTGCTCTTCCCCAGCTGCAAAGACAATGTTGCTC...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp CGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCTCTCCATCTCTAAGATaGTGCCAAGATAGCACACAA +
Preference number: 4 (lower is better)
Translates to: RGLRGDVFFRSPVLLEDSSPSLR*CQDSTQ
Trigger: TTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGA...GCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp CACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCGGAAAGGAGCCAGTaGCGTCCGAACACACGGTCA +
Preference number: 4 (lower is better)
Translates to: HTVFKLSRRQPALLVEWLSERSQ*RPNTRS
Trigger: TGACCGTGTGTTCGGACGGCACTGGCTCCTTTCCGA...AAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GGTCCAGGAGGCAGGACTTACAGGAATTTGATTGGCATAGACAGTGGCCAATCAACCTTACTGTACACTTaGGGGCTCTCAGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GPGGRTYRNLIGIDSGQSTLLYT*GLSGAP
Trigger: GGGAGCACCTGAGAGCCCGCAAGTGTACAGTAAGGT...TGATTGGCCACTGTCTATGCCAATCAAATTCCTGTAAGTCCTGCCTCCTGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp TTCCAAACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAGTGGAATGCTAAGTaGCTACACCCTAGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: FQTLVTPGFPKGKQAAGIQWNAK*LHPSRG
Trigger: ACCCCGGCTAGGGTGTAGGCACTTAGCATTCCACTG...AATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp GCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGGCAGAGGATTGCAGTACTaGTCAATATATACAGCACCT +
Preference number: 4 (lower is better)
Translates to: AESWWSSRAAQRRAVTLGRGLQY*SIYTAP
Trigger: AGGTGCTGTATATATTGACCAGTACTGCAATCCTCT...GCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp CGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTAAGGCCAAGCTGGGGTaGCGACTGTTTATGCCCCGA +
Preference number: 4 (lower is better)
Translates to: RYLNLVGGNQHYWWSGFPKAKLG*RLFMPR
Trigger: TCGGGGCATAAACAGTCGCCACCCCAGCTTGGCCTT...AGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCCAAACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCCCGGGTCTAGGGTTTaGATGTGCTGGAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: FQTLVTPGFPKGKQAAGIPGSRV*MCWRMS
Trigger: TGACATCCTCCAGCACATCCAAACCCTAGACCCGGG...AATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTCCGTGCGGCAGGCTGTaGACGTTCATGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGPCGRL*TFMFRI
Trigger: GATCCGGAACATGAACGTCCACAGCCTGCCGCACGG...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGCACTACTGGTGGAGTaGCTTTCCTGGTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSEALLVE*LSWCSR
Trigger: CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGC...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAAGCTCGCTTGAGAACTaGCAGGCCGAGAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSESSLEN*QAESWW
Trigger: CCACCAACTCTCGGCCTGCCAGTTCTCAAGCGAGCT...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp CTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGAGCAGGCATTCAACATaGGTGAGAATACTGCATGCA +
Preference number: 4 (lower is better)
Translates to: LSRRQPALLVEWLSWCSRSRHST*VRILHA
Trigger: TGCATGCAGTATTCTCACCCATGTTGAATGCCTGCT...CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGTCCCCTTCTGCGCCTTaGCACCACCTTAATAAGAAG +
Preference number: 4 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKSPSAP*HHLNKK
Trigger: CTTCTTATTAAGGTGGTGCCAAGGCGCAGAAGGGGA...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550180.5
CDS-3UTR TCA 90 bp GCAACATTCAAGGTTAAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTATCTGGGCTCAGTTACTaGGAACTTCGGAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ATFKVKVAARPRLNRGEVSGLSY*ELRKGA
Trigger: GGCTCCTTTCCGAAGTTCTCAGTAACTGAGCCCAGA...TACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTTAACCTTGAATGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp GCAGCTGGGGAAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTAACCAACTTACACAGGTaGTACAGGCTTCCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: AAGEEHTVFKLSRRQPALTNLHR*YRLPGA
Trigger: GGCTCCAGGAAGCCTGTATCACCTGTGTAAGTTGGT...TAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTTCCCCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGTGCATTTTGTCCAGTTaGTGTCTCTCCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKCILSS*CLSFPP
Trigger: TGGAGGGAAGGAGAGACATCAACTGGACAAAATGCA...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp CGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCTGTCGGAGAGAGGATTaGAGTACTGGTCAATATATA +
Preference number: 4 (lower is better)
Translates to: RGLRGDVFFRSPVLLEDSCRRED*STGQYI
Trigger: TATATATTGACCAGTACTGCAATCCTCTCTCCGACA...GCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCTGCCCCGAAGGGTTTTaGAAACAAGCTCCACGATGC +
Preference number: 4 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFCPEGF*KQAPRC
Trigger: GCATCGTGGAGCTTGTTTGCAAAACCCTTCGGGGCA...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGGGTGGCGACTGTTTATaGCCCGAAGGGTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: SPQGFQRVNKQQAFNMGEGGDCL*PEGFCK
Trigger: TTTGCAAAACCCTTCGGGGCATAAACAGTCGCCACC...CTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp CGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTAGTGCTGCAGTCACGTaGTGGCCGATCAAGTACTCG +
Preference number: 4 (lower is better)
Translates to: RYLNLVGGNQHYWWSGFPSAAVT*WPIKYS
Trigger: CGAGTACTTGATCGGCCAGCACGTGACTGCAGCACT...AGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp ACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGGAAATTAGTGCTGCAGTCACGTaGTGGCCGATCAAGTACTCG +
Preference number: 4 (lower is better)
Translates to: TQSSLGTEHVPQRNQKEISAAVT*WPIKYS
Trigger: CGAGTACTTGATCGGCCAGCACGTGACTGCAGCACT...AATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTCACCCCATACAGTGCTaGAGTCACGTGCTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGHPIQC*SHVLAD
Trigger: ATCGGCCAGCACGTGACTGCAGCACTGTATGGGGTG...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GGTCCAGGAGGCAGGACTTACAGGAATTTGATTGGCATAGACAGTGGCCAATCACTGGTCCGGGTACATTaGCAGATAGAGATCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GPGGRTYRNLIGIDSGQSLVRVH*QIEIQR
Trigger: TCGCTGGATCTCTATCTGGCAATGTACCCGGACCAG...TGATTGGCCACTGTCTATGCCAATCAAATTCCTGTAAGTCCTGCCTCCTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR GCA 90 bp CACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTGGAGGAGGAGAAGCTaGACCTGGTCCGGGTACATT +
Preference number: 4 (lower is better)
Translates to: HTVFKLSRRQPALLVEWLWRRRS*TWSGYI
Trigger: AATGTACCCGGACCAGGTGCAGCTTCTCCTCCTCCA...AAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATCAAGTTTTCTTGGGCTaGGTATCGACAGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: TLVTPGFPKGKQAAGIQHQVFLG*VSTGAV
Trigger: GACGGCTCCTGTCGATACGCAGCCCAAGAAAACTTG...ATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp CTGCTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGAAGATGGACAGACAGGTaGAGAGACAGGCCCCTAACG +
Preference number: 4 (lower is better)
Translates to: LLSFLRGERSEHLQMRTGRWTDR*RDRPLT
Trigger: CGTTAGGGGCCTGTCTCTGCACCTGTCTGTCCATCT...TCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp CTTGGAAAAGCAGATTCCAACACGCACATCTCCTTTCACACAAGTCCAACACTCCCTTGGCGGGCCAGGTaGTGTGAGTGGTTACGTTTC +
Preference number: 4 (lower is better)
Translates to: LGKADSNTHISFHTSPTLPWRAR*CEWLRF
Trigger: GAAACGTAACCACTCACAGCACCTGGCCCGCCAAGG...GAGTGTTGGACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GCAACATTCAAGGTTAAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTATTTTCAAAGCATGTCTaGAAACACCGGACCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ATFKVKVAARPRLNRGEVFSKHV*KHRTPG
Trigger: CCCGGGGGTCCGGTGTTTGCAGACATGCTTTGAAAA...TACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTTAACCTTGAATGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp GCAGGTTCAAATCCTTTGACTTTGGATTTGACTGATGAGGAACATGGACAGTGGGGCGAGGTAGTTGCTTaGGCCGCAGAGTGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: AGSNPLTLDLTDEEHGQWGEVVA*AAECGC
Trigger: ACACCCACACTCTGCGGCGCAAGCAACTACCTCGCC...CCACTGTCCATGTTCCTCATCAGTCAAATCCAAAGTCAAAGGATTTGAACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCCAAACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTGCCCCTTCTGCGCCTTaGCACCACCTTAATAAGAAG +
Preference number: 4 (lower is better)
Translates to: FQTLVTPGFPKGKQAAGIAPSAP*HHLNKK
Trigger: CTTCTTATTAAGGTGGTGCCAAGGCGCAGAAGGGGC...AATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp ACTTACAGGAATTTGATTGGCATAGACAGTGGCCAATCAGATGTCCGGGCTGTGAGGAGCTGGTATGACTaGTCGATGCCTTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: TYRNLIGIDSGQSDVRAVRSWYD*SMPSRF
Trigger: GAAGCGGGAAGGCATCGACCAGTCATACCAGCTCCT...CACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAAATTCCTGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCGAGTCTCTCAGGAGCTaGTATGACTGGTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFESLRS*YDWSMP
Trigger: AGGCATCGACCAGTCATACCAGCTCCTGAGAGACTC...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGGAAATTAGGAGAAGCTGCACCTaGTCCGGGTACATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: TQSSLGTEHVPQRNQKEIRRSCT*SGYIAR
Trigger: TCTGGCAATGTACCCGGACCAGGTGCAGCTTCTCCT...AATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGAGGAGAAGCTGCACCTaGTCCGGGTACATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLRRSCT*SGYIAR
Trigger: TCTGGCAATGTACCCGGACCAGGTGCAGCTTCTCCT...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCTGGACACATCGTATACAGCACAGCCATTCAAATCAACGGCAACAGAACGCAGTCCCATCATGCAGGTaGGGTCCCAGCCGTAGATCA +
Preference number: 4 (lower is better)
Translates to: FWTHRIQHSHSNQRQQNAVPSCR*GPSRRS
Trigger: TGATCTACGGCTGGGACCCCACCTGCATGATGGGAC...TGCGTTCTGTTGCCGTTGATTTGAATGGCTGTGCTGTATACGATGTGTCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp GCAGCTGGGGAAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTAGGAGTCCCGTTCTCTTaGAAGATAGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AAGEEHTVFKLSRRQPALGVPFS*KIAAAA
Trigger: TGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCC...TAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTTCCCCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp CTTGGAAAAGCAGATTCCAACACGCACATCTCCTTTCACACAAGTCCAACACTCGCACTACTGGTGGAGTaGCTTTCCTGGTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LGKADSNTHISFHTSPTLALLVE*LSWCSR
Trigger: CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGC...GAGTGTTGGACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCGTCAAGCACCTTCTCTaGCCAGATTCCCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFVKHLL*PDSQVE
Trigger: TTCCACCTGGGAATCTGGCCAGAGAAGGTGCTTGAC...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp TTCCAAACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTAGTGCCAGTAAACTCTaGGAAATAGCGTCCCACGTC +
Preference number: 4 (lower is better)
Translates to: FQTLVTPGFPKGKQAAGISASKL*EIASHV
Trigger: GACGTGGGACGCTATTTCTCAGAGTTTACTGGCACT...AATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp ACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATAGTGCCAGTAAACTCTaGGAAATAGCGTCCCACGTC +
Preference number: 4 (lower is better)
Translates to: TLVTPGFPKGKQAAGIQHSASKL*EIASHV
Trigger: GACGTGGGACGCTATTTCTCAGAGTTTACTGGCACT...ATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp ACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGGAAATTCAGGAGCGTCGACTGTaGGACCTCATGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: TQSSLGTEHVPQRNQKEIQERRL*DLMKTE
Trigger: TTCTGTCTTCATGAGGTCTCACAGTCGACGCTCCTG...AATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp CTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGGAAGACCATGGAGTATaGCTTCTAAGAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: LSRRQPALLVEWLSWCSREDHGV*LLRANI
Trigger: AATGTTTGCTCTTAGAAGTCATACTCCATGGTCTTC...CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGGGCATTCAACATGGGTaGGAATACTGCATGCAGATG +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMGIQHG*EYCMQM
Trigger: CATCTGCATGCAGTATTCTCACCCATGTTGAATGCC...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp CTGCTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGAAGCCTTCCCTTGCTATaGAGTGGTCTCAGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLSFLRGERSEHLQMRTGSLPLL*SGLRWL
Trigger: AAGCCACCTGAGACCACTTCATAGCAAGGGAAGGCT...TCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCTCCACACCTTCCCGCTaGTCTGGCACAGCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLSTPSR*SGTARA
Trigger: TGCGCGAGCTGTGCCAGAGCAGCGGGAAGGTGTGGA...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAATGCCCCGAAGGGTTTTaGAAACAAGCTCCACGATGC +
Preference number: 4 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSECPEGF*KQAPRC
Trigger: GCATCGTGGAGCTTGTTTGCAAAACCCTTCGGGGCA...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTAGTGCTGCAGTCACGTaGTGGCCGATCAAGTACTCG +
Preference number: 4 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGSAAVT*WPIKYS
Trigger: CGAGTACTTGATCGGCCAGCACGTGACTGCAGCACT...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp GCAGCTGGGGAAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTATCTAGGGTTTGGATGTaGTGGAGGATGTCAAGCACC +
Preference number: 4 (lower is better)
Translates to: AAGEEHTVFKLSRRQPALSRVWM*WRMSST
Trigger: GGTGCTTGACATCCTCCAGCACATCCAAACCCTAGA...TAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTTCCCCAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp GCAACATTCAAGGTTAAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTAGAGCAACATTGTCTTTaGAGCTGGGGAAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: ATFKVKVAARPRLNRGEVEQHCL*SWGRAH
Trigger: GTGTGCTCTTCCCCAGCTGCAAAGACAATGTTGCTC...TACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTTAACCTTGAATGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGCGACTCATAGTCATCTaGCTGCTGAAGAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMRLIVI*LLKKGL
Trigger: AAGGCCTTTCTTCAGCAGCCAGATGACTATGAGTCG...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGACGATGCTGTCAATTTaGGCCTGGATGTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMTMLSI*AWMSLR
Trigger: CCTCAAAGACATCCAGGCCCAAATTGACAGCATCGT...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATATGGCATCCAGCACCTaGCTCTGGAGTTCTATTTCC +
Preference number: 4 (lower is better)
Translates to: TLVTPGFPKGKQAAGIQHMASST*LWSSIS
Trigger: GGAAATAGAACTCCAGAGCCAGGTGCTGGATGCCAT...ATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp CCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTCCTCTCTAGACAAAGGACATAGTTCATaGCATCCAGCACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PVLLEDSSSSKGAMSSLDKGHSS*HPAPGS
Trigger: AGAGCCAGGTGCTGGATGCCATGAACTATGTCCTTT...GTCTAGAGAGGACATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp CAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGAATACTGCATGCAGAAGGAGCTGGTATGACTaGTCGATGCCTTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: QRVNKQQAFNMGENTACRRSWYD*SMPSRF
Trigger: GAAGCGGGAAGGCATCGACCAGTCATACCAGCTCCT...TCTGCATGCAGTATTCTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp CACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTGAGTCTCTCAGGAGCTaGTATGACTGGTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: HTVFKLSRRQPALLVEWLESLRS*YDWSMP
Trigger: AGGCATCGACCAGTCATACCAGCTCCTGAGAGACTC...AAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AAGAGAAGGGAGACTCACACTGAAGGCATTCTTGTCTCTTACCAGCTTCCACAGGAGTCTCTCAGGAGCTaGTATGACTGGTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: KRRETHTEGILVSYQLPQESLRS*YDWSMP
Trigger: AGGCATCGACCAGTCATACCAGCTCCTGAGAGACTC...CTGTGGAAGCTGGTAAGAGACAAGAATGCCTTCAGTGTGAGTCTCCCTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp CGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGGAAGTAAAGCCTaGCTTGGAGGAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RYLNLVGGNQHYWWSGFPGGSKA*LGGGEA
Trigger: AGCTTCTCCTCCTCCAAGCCAGGCTTTACTTCCACC...AGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp CTGCTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGAGGTGGAAGTAAAGCCTaGCTTGGAGGAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLSFLRGERSEHLQMRTGGGSKA*LGGGEA
Trigger: AGCTTCTCCTCCTCCAAGCCAGGCTTTACTTCCACC...TCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGCTCCAGCTCTGCGTTTaGGATGTAGTGAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLLQLCV*DVVSAS
Trigger: ACTGGCACTCACTACATCCCAAACGCAGAGCTGGAG...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp CGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTCTCCAGCTCTGCGTTTaGGATGTAGTGAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: RYLNLVGGNQHYWWSGFPLQLCV*DVVSAS
Trigger: ACTGGCACTCACTACATCCCAAACGCAGAGCTGGAG...AGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGGTCCCGAGGGCTCCGTaGAGACGTCTTCTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMVPRAP*RRLLPE
Trigger: CTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGAC...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGGTCAAGCACCTTCTCTaGCCAGATTCCCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLVKHLL*PDSQVE
Trigger: TTCCACCTGGGAATCTGGCCAGAGAAGGTGCTTGAC...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ACATTCAAGGTTAAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTAGTTAGGACCCTGGCGGCTTaGAAAAGCAGATTCCAACAC +
Preference number: 4 (lower is better)
Translates to: TFKVKVAARPRLNRGEVVRTLAA*KSRFQH
Trigger: GTGTTGGAATCTGCTTTTCCAAGCCGCCAGGGTCCT...AACTACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTTAACCTTGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp CGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTAGGAGCTGGTATGACTaGTCGATGCCTTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RYLNLVGGNQHYWWSGFPRSWYD*SMPSPS
Trigger: AGAAGGGGAAGGCATCGACCAGTCATACCAGCTCCT...AGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550180.5
CDS-3UTR CCA 90 bp AGCCAGTGCCGTCCGAACACACGGTCAGGCTTTCCCAGAAGACGCCACAACAGGGATAAAATTAACGTTTaGCAAGGAGGTCATGGTTTA +
Preference number: 4 (lower is better)
Translates to: SQCRPNTRSGFPRRRHNRDKINV*QGGHGL
Trigger: TAAACCATGACCTCCTTGCCAAACGTTAATTTTATC...CCTGTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGGCTCAGTTTTCTCCGTaGGGAAAGATCGGAACACTT +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMAQFSP*GKIGTL
Trigger: AAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAGC...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp CTTGGAAAAGCAGATTCCAACACGCACATCTCCTTTCACACAAGTCCAACACTCACCAAGGCTAAACCGTaGCGAGGTAGTTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: LGKADSNTHISFHTSPTLTKAKP*RGSCLR
Trigger: GCGCAAGCAACTACCTCGCCACGGTTTAGCCTTGGT...GAGTGTTGGACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp TTCCAAACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTGGCATTCAACATGGGTaGGAATACTGCATGCAGATG +
Preference number: 4 (lower is better)
Translates to: FQTLVTPGFPKGKQAAGIGIQHG*EYCMQM
Trigger: CATCTGCATGCAGTATTCTCACCCATGTTGAATGCC...AATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGTTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGCATTTTGGACATAACTaGTGTCTCACTGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKHFGHN*CLTETA
Trigger: AGCTGTCTCAGTGAGACATCAGTTATGTCCAAAATG...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp TTCTGGACACATCGTATACAGCACAGCCATTCAAATCAACGGCAACAGAACGCACTCAGGCAGGCGACATaGAAGCCGGCCTTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: FWTHRIQHSHSNQRQQNALRQAT*KPAFQN
Trigger: ATTTTGAAAGGCCGGCTTTCATGTCGCCTGCCTGAG...TGCGTTCTGTTGCCGTTGATTTGAATGGCTGTGCTGTATACGATGTGTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTTGCCCCGAAGGGTTTTaGAAACAAGCTCCACGATGC +
Preference number: 4 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGCPEGF*KQAPRC
Trigger: GCATCGTGGAGCTTGTTTGCAAAACCCTTCGGGGCA...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGGGTGGCGACTGTTTATaGCCCGAAGGGTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLGGDCL*PEGFCK
Trigger: TTTGCAAAACCCTTCGGGGCATAAACAGTCGCCACC...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTCTGGTCCGGGTACATTaGCAGATAGAGATCCAGCGA +
Preference number: 4 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGLVRVH*QIEIQR
Trigger: TCGCTGGATCTCTATCTGGCAATGTACCCGGACCAG...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAATCTAGGGTTTGGATGTaGTGGAGGATGTCAAGCACC +
Preference number: 4 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSESRVWM*WRMSST
Trigger: GGTGCTTGACATCCTCCAGCACATCCAAACCCTAGA...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGACTCGTGTCCCATCATaGAGGTGGGGTCCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMTRVPS*RWGPSR
Trigger: ACGGCTGGGACCCCACCTGCATGATGGGACACGAGT...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCACTCGTGTCCCATCATaGAGGTGGGGTCCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLTRVPS*RWGPSR
Trigger: ACGGCTGGGACCCCACCTGCATGATGGGACACGAGT...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCAAGTTTTCTTGGGCTaGGTATCGACAGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: TRYLNLVGGNQHYWWSGFQVFLG*VSTGAV
Trigger: GACGGCTCCTGTCGATACGCAGCCCAAGAAAACTTG...AAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTCCGGATCTCCAGCTCTaGGTTTGGGATGTAGTGAGT +
Preference number: 4 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGPDLQL*VWDVVS
Trigger: ACTCACTACATCCCAAACGCAGAGCTGGAGATCCGG...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp CTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGACTTCCGGATCTCCAGCTCTaGGTTTGGGATGTAGTGAGT +
Preference number: 4 (lower is better)
Translates to: LSFLRGERSEHLQMRTGLPDLQL*VWDVVS
Trigger: ACTCACTACATCCCAAACGCAGAGCTGGAGATCCGG...AAGTCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp CACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTGGTGAGAATACTGCATaGAGATGGACAGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: HTVFKLSRRQPALLVEWLGENTA*RWTDRC
Trigger: GCACCTGTCTGTCCATCTGCATGCAGTATTCTCACC...AAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCCTGTCAATTTGGGCCTaGATGTCTTTGAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFLSIWA*MSLRLM
Trigger: CATCAGCCTCAAAGACATCCAGGCCCAAATTGACAG...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGATGGCATCCAGCACCTaGCTCTGGAGTTCTATTTCC +
Preference number: 4 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLMASST*LWSSIS
Trigger: GGAAATAGAACTCCAGAGCCAGGTGCTGGATGCCAT...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGAGTCTCTCAGGAGCTaGTATGACTGGTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGESLRS*YDWSMP
Trigger: AGGCATCGACCAGTCATACCAGCTCCTGAGAGACTC...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp CAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGAATACTGCATGCAGAGGTGGAAGTAAAGCCTaGCTTGGAGGAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: QRVNKQQAFNMGENTACRGGSKA*LGGGEA
Trigger: AGCTTCTCCTCCTCCAAGCCAGGCTTTACTTCCACC...TCTGCATGCAGTATTCTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp CGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTAGGGTTTGGATGTGCTaGAGGATGTCAAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: RYLNLVGGNQHYWWSGFPRVWMC*RMSSTF
Trigger: GAAGGTGCTTGACATCCTCCAGCACATCCAAACCCT...AGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGAGGGTTTGGATGTGCTaGAGGATGTCAAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLRVWMC*RMSSTF
Trigger: GAAGGTGCTTGACATCCTCCAGCACATCCAAACCCT...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTATTCCAAGTTTTCTTaGGCTGCGTATCGACAGGAG +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMYSKFS*AAYRQE
Trigger: CTCCTGTCGATACGCAGCCCAAGAAAACTTGGAATA...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCAAACTCCAGATCTTCTaGATACCGGATCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFKLQIF*IPDLQL
Trigger: GAGCTGGAGATCCGGTATCCAGAAGATCTGGAGTTT...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGGAGTCCCGTTCTCTTaGAAGATAGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGGVPFS*KIAAAA
Trigger: TGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCC...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTGGAGTCCCGTTCTCTTaGAAGATAGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TRYLNLVGGNQHYWWSGFGVPFS*KIAAAA
Trigger: TGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCC...AAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp CTTGGAAAAGCAGATTCCAACACGCACATCTCCTTTCACACAAGTCCAACACTCGGAGTCCCGTTCTCTTaGAAGATAGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGKADSNTHISFHTSPTLGVPFS*KIAAAA
Trigger: TGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCC...GAGTGTTGGACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCCATTGTCTTTGCAGCTaGGGAAGAGCACACGGTATT +
Preference number: 4 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFHCLCS*GRAHGI
Trigger: AATACCGTGTGCTCTTCCCCAGCTGCAAAGACAATG...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp GCAGCTGGGGAAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTATCCCTTGCTATGAAGTaGTCTCAGGTGGCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: AAGEEHTVFKLSRRQPALSLAMK*SQVAFQ
Trigger: TTGGAAAGCCACCTGAGACCACTTCATAGCAAGGGA...TAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTTCCCCAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GCAACATTCAAGGTTAAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTATCCCTTGCTATGAAGTaGTCTCAGGTGGCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: ATFKVKVAARPRLNRGEVSLAMK*SQVAFQ
Trigger: TTGGAAAGCCACCTGAGACCACTTCATAGCAAGGGA...TACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTTAACCTTGAATGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp TTGGAAAAGCAGATTCCAACACGCACATCTCCTTTCACACAAGTCCAACACTCTGTGGGTGTGAACAGCTaGAGCTCAGTGGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LEKQIPTRTSPFTQVQHSVGVNS*SSVVPG
Trigger: TCCAGGAACCACTGAGCTCCAGCTGTTCACACCCAC...AGAGTGTTGGACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
3UTR CAA 72 bp TCAAGTCATGGCTGGGCTTTCTGTCCTCAAACGAAATaGGGCAGGCCATTTGCGTGGTTTCTCTGGATAAGT +
Preference number: 4 (lower is better)
Translates to: SSHGWAFCPQTK*GRPFAWFLWIS
Trigger: ACTTATCCAGAGAAACCACGCAAATGGCCTGCCCAATTTCGTTTGAGGACAGAAAGCCCAGCCATGACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp GCAGCTGGGGAAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTATTCCATTATCATGGATaGTTCACCTGCCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: AAGEEHTVFKLSRRQPALFHYHG*FTCLEG
Trigger: GCCTTCAAGGCAGGTGAATCATCCATGATAATGGAA...TAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTTCCCCAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp GCAGCTGGGGAAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACACCTTAATAAGAAGTaGCTTGGGAAGTTGACAGGC +
Preference number: 4 (lower is better)
Translates to: AAGEEHTVFKLSRRQPALHLNKK*LGKLTG
Trigger: GCCTGTCAACTTCCCAAGTCACTTCTTATTAAGGTG...TAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTTCCCCAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGGGGTGTGAGATTTCTTaGGGCTCCACGTTATATTCC +
Preference number: 4 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLGCEIS*GSTLYS
Trigger: GGAATATAACGTGGAGCCTCAAGAAATCTCACACCC...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTAGTGCCAGTAAACTCTaGGAAATAGCGTCCCACGTC +
Preference number: 4 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGSASKL*EIASHV
Trigger: GACGTGGGACGCTATTTCTCAGAGTTTACTGGCACT...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp GCAGCTGGGGAAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTAGCCAAGGAAATGTTCTaGGACAAATGCAGACAGACA +
Preference number: 4 (lower is better)
Translates to: AAGEEHTVFKLSRRQPALAKEMF*DKCRQT
Trigger: TGTCTGTCTGCATTTGTCTCAGAACATTTCCTTGGC...TAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTTCCCCAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp GCAGGTTCAAATCCTTTGACTTTGGATTTGACTGATGAGGAACATGGACAGTGGTCTGGGCTCAGTTACTaGGAACTTCGGAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AGSNPLTLDLTDEEHGQWSGLSY*ELRKGA
Trigger: GGCTCCTTTCCGAAGTTCTCAGTAACTGAGCCCAGA...CCACTGTCCATGTTCCTCATCAGTCAAATCCAAAGTCAAAGGATTTGAACCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACACCTCACCCGGAACTaGTCCTTCCACACCTTCCCG +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTHLTRN*SFHTFP
Trigger: CGGGAAGGTGTGGAAGGAGCAGTTCCGGGTGAGGTG...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGTCTAACCCAGCTTTTTaGCGAACTTTATACTCTTCC +
Preference number: 4 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKSNPAF*RTLYSS
Trigger: GGAAGAGTATAAAGTTCGGCAAAAAGCTGGGTTAGA...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATTCTTTCACTGTCAGCTaGTTGCCTTTCCCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: TLVTPGFPKGKQAAGIQHSFTVS*LPFPKA
Trigger: TGCTTTTGGGAAAGGCAAGCAGCTGACAGTGAAAGA...ATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGGGTTACGTTTCCAGATaGAGGTTCAAATCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMGYVSR*RFKSFD
Trigger: GTCAAAGGATTTGAACCTGCATCTGGAAACGTAACC...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp CACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTCGACTCATAGTCATCTaGCTGCTGAAGAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: HTVFKLSRRQPALLVEWLRLIVI*LLKKGL
Trigger: AAGGCCTTTCTTCAGCAGCCAGATGACTATGAGTCG...AAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGGAAATTAAAGGACATAGTTCATaGCATCCAGCACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: TQSSLGTEHVPQRNQKEIKGHSS*HPAPGS
Trigger: AGAGCCAGGTGCTGGATGCCATGAACTATGTCCTTT...AATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCCAGAGACATGCTGATTaGGATTCCTGTTCTGCGAAT +
Preference number: 4 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFQRHAD*DSCSAN
Trigger: ATTCGCAGAACAGGAATCCCAATCAGCATGTCTCTG...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATCAGAGACATGCTGATTaGGATTCCTGTTCTGCGAAT +
Preference number: 4 (lower is better)
Translates to: TLVTPGFPKGKQAAGIQHQRHAD*DSCSAN
Trigger: ATTCGCAGAACAGGAATCCCAATCAGCATGTCTCTG...ATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GGAACAAAGAGAAGGGAGACTCACACTGAAGGCATTCTTGTCTCTTACCAGCTTAGGGTTTGGATGTGCTaGAGGATGTCAAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: GTKRRETHTEGILVSYQLRVWMC*RMSSTF
Trigger: GAAGGTGCTTGACATCCTCCAGCACATCCAAACCCT...AAGCTGGTAAGAGACAAGAATGCCTTCAGTGTGAGTCTCCCTTCTCTTTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CCA 90 bp AAACATGACGCCTGGCAAAACCGGTCTGATTCTAAGGTAAACTCATTTTGGACACCCGGGTCTAGGGTTTaGATGTGCTGGAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: KHDAWQNRSDSKVNSFWTPGSRV*MCWRMS
Trigger: TGACATCCTCCAGCACATCCAAACCCTAGACCCGGG...TGTCCAAAATGAGTTTACCTTAGAATCAGACCGGTTTTGCCAGGCGTCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACCGTGCGGCAGGCTGTaGACGTTCATGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTPCGRL*TFMFRI
Trigger: GATCCGGAACATGAACGTCCACAGCCTGCCGCACGG...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGAAACTCCAGATCTTCTaGATACCGGATCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLKLQIF*IPDLQL
Trigger: GAGCTGGAGATCCGGTATCCAGAAGATCTGGAGTTT...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATAGCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACGTCCCGAGGGCTCCGTaGAGACGTCTTCTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: IAHNFTSEYATNFRVKRHVPRAP*RRLLPE
Trigger: CTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGAC...GTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGGCACTACTGGTGGAGTaGCTTTCCTGGTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMALLVE*LSWCSR
Trigger: CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGC...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TACAAAGACTTTATTAGGCCAGTGCCCGGCTCAAAGTTAGCATGCCACACAAAAAACCAGCACTACTGGTaGAGTGGCTTTCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: YKDFIRPVPGSKLACHTKNQHYW*SGFPGA
Trigger: TGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTT...TTTTGTGTGGCATGCTAACTTTGAGCCGGGCACTGGCCTAATAAAGTCTTTGTA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp ACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGGAAATTCATTGTCTTTGCAGCTaGGGAAGAGCACACGGTATT +
Preference number: 4 (lower is better)
Translates to: TQSSLGTEHVPQRNQKEIHCLCS*GRAHGI
Trigger: AATACCGTGTGCTCTTCCCCAGCTGCAAAGACAATG...AATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TTGGAAAAGCAGATTCCAACACGCACATCTCCTTTCACACAAGTCCAACACTCTAGGACCCTGGCGGCTTaGAAAAGCAGATTCCAACAC +
Preference number: 4 (lower is better)
Translates to: LEKQIPTRTSPFTQVQHSRTLAA*KSRFQH
Trigger: GTGTTGGAATCTGCTTTTCCAAGCCGCCAGGGTCCT...AGAGTGTTGGACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCTGGACACATCGTATACAGCACAGCCATTCAAATCAACGGCAACAGAACGCATGGCTTTCCAAACCTTaGTCACCCCAGGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: FWTHRIQHSHSNQRQQNAWLSKP*SPQGFQ
Trigger: TTGGAAACCCTGGGGTGACCAAGGTTTGGAAAGCCA...TGCGTTCTGTTGCCGTTGATTTGAATGGCTGTGCTGTATACGATGTGTCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp GGTGAGAGACATTCTACTCAAGTCATGGCTGGGCTTTCTGTCCTCAAACGAAATGTGATACAGGCTTCCTaGAGCCCCATGAAGCATTCA +
Preference number: 4 (lower is better)
Translates to: GERHSTQVMAGLSVLKRNVIQAS*SPMKHS
Trigger: TGAATGCTTCATGGGGCTCCAGGAAGCCTGTATCAC...ATTTCGTTTGAGGACAGAAAGCCCAGCCATGACTTGAGTAGAATGTCTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp GCAGCTGGGGAAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACACTTACTTGGAGTATaGACTAAGGAGGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: AAGEEHTVFKLSRRQPALHLLGV*TKEGKA
Trigger: TGCTTTCCCCTCCTTAGTCCATACTCCAAGTAAGTG...TAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTTCCCCAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACAATGATTCACCTGCCTTaGAGGCCAAGCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTMIHLP*RPSWGG
Trigger: GCCACCCCAGCTTGGCCTTCAAGGCAGGTGAATCAT...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAACCATTCGATTCCCCTTaGACTTCAGTTGGTCGTAAA +
Preference number: 4 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSEPFDSP*TSVGRK
Trigger: TTTACGACCAACTGAAGTTCAAGGGGAATCGAATGG...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp CCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTCCTCTCTAGACCTGCGAATCAAAACCTaGTGCATATATAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PVLLEDSSSSKGAMSSLDLRIKT*CIYKLR
Trigger: CCTCAACTTATATATGCATCAGGTTTTGATTCGCAG...GTCTAGAGAGGACATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGCCAAGGAAATGTTCTaGGACAAATGCAGACAGACA +
Preference number: 4 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSEAKEMF*DKCRQT
Trigger: TGTCTGTCTGCATTTGTCTCAGAACATTTCCTTGGC...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACAGCGGGCCAGGTGCTGTaGGTGGTTACGTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTAGQVL*VVTFPD
Trigger: ATCTGGAAACGTAACCACTCACAGCACCTGGCCCGC...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp CAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGAATACTGCATGCAGAACGGAAACAGTGCTCTaGAGACATTCTGGACACATC +
Preference number: 4 (lower is better)
Translates to: QRVNKQQAFNMGENTACRTETVL*RHSGHI
Trigger: GATGTGTCCAGAATGTCTTCAGAGCACTGTTTCCGT...TCTGCATGCAGTATTCTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp TACAAAGACTTTATTAGGCCAGTGCCCGGCTCAAAGTTAGCATGCCACACAAAAGGTGAGAATACTGCATaGAGATGGACAGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: YKDFIRPVPGSKLACHTKGENTA*RWTDRC
Trigger: GCACCTGTCTGTCCATCTGCATGCAGTATTCTCACC...TTTTGTGTGGCATGCTAACTTTGAGCCGGGCACTGGCCTAATAAAGTCTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAACTTAAAGCCTTCCCTTaGTATGAAGTGGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSELKAFP*YEVVSG
Trigger: ACCTGAGACCACTTCATAGCAAGGGAAGGCTTTAAG...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp TCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGTCTCTTTCTAGTAACTaGTTAAAGCCTTCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SPQGFQRVNKQQAFNMGESLSSN*LKPSLA
Trigger: AGCAAGGGAAGGCTTTAAGCAGTTACTAGAAAGAGA...CTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAACTGTCCGCTCACCAATaGTCAGAAAAATTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSELSAHQ*SEKFSR
Trigger: TCTGCTGAATTTTTCTGAGCATTGGTGAGCGGACAG...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp CTTGGAAAAGCAGATTCCAACACGCACATCTCCTTTCACACAAGTCCAACACTCACGATGCTGTCAATTTaGGCCTGGATGTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: LGKADSNTHISFHTSPTLTMLSI*AWMSLR
Trigger: CCTCAAAGACATCCAGGCCCAAATTGACAGCATCGT...GAGTGTTGGACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGCAGAGACATGCTGATTaGGATTCCTGTTCTGCGAAT +
Preference number: 4 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLQRHAD*DSCSAN
Trigger: ATTCGCAGAACAGGAATCCCAATCAGCATGTCTCTG...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATTCTGGACACATCGTATACAGCACAGCCATTCAAATCAACGGCAACAGAACGCAATACTGCATGCAGATaGACAGACAGGTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ILDTSYTAQPFKSTATERNTACR*TDRCRD
Trigger: GTCTCTGCACCTGTCTGTCCATCTGCATGCAGTATT...GCGTTCTGTTGCCGTTGATTTGAATGGCTGTGCTGTATACGATGTGTCCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp CTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGACTTTACTCAAGTCATGGCTaGGCTTTCTGTCCTCAAACG +
Preference number: 4 (lower is better)
Translates to: LSFLRGERSEHLQMRTGLYSSHG*AFCPQT
Trigger: CGTTTGAGGACAGAAAGCCCAGCCATGACTTGAGTA...AAGTCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTCCATTCGATTCCCCTTaGACTTCAGTTGGTCGTAAA +
Preference number: 4 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGPFDSP*TSVGRK
Trigger: TTTACGACCAACTGAAGTTCAAGGGGAATCGAATGG...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACAAGTGACTTGGGAAGTTaGCAGGCTCCAGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTSDLGS*QAPVGL
Trigger: GAGTCCCACTGGAGCCTGTCAACTTCCCAAGTCACT...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp ACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTGACTGTGAGACCTCATaGAGACAGAATGTCACAAAC +
Preference number: 4 (lower is better)
Translates to: TRYLNLVGGNQHYWWSGFDCETS*RQNVTN
Trigger: GTTTGTGACATTCTGTCTTCATGAGGTCTCACAGTC...AAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTGGAGGAATTGTAGATaGGTATGGAAAAATCCATTC +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMWRNCR*VWKNPF
Trigger: GAATGGATTTTTCCATACTCATCTACAATTCCTCCA...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTCAACATTCTAACCCAGCTTTTTaGCGAACTTTATACTCTTCC +
Preference number: 4 (lower is better)
Translates to: TLVTPGFPKGKQAAGIQHSNPAF*RTLYSS
Trigger: GGAAGAGTATAAAGTTCGGCAAAAAGCTGGGTTAGA...ATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGTGCCCCGAAGGGTTTTaGAAACAAGCTCCACGATGC +
Preference number: 4 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMCPEGF*KQAPRC
Trigger: GCATCGTGGAGCTTGTTTGCAAAACCCTTCGGGGCA...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp CACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTTGGGATTCCTGTTCTaGGAATCAAAACCTGATGCA +
Preference number: 4 (lower is better)
Translates to: HTVFKLSRRQPALLVEWLLGFLF*ESKPDA
Trigger: TGCATCAGGTTTTGATTCGCAGAACAGGAATCCCAA...AAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ACATTCAAGGTTAAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTAGTTTTGGGATTCCTGTTCTaGGAATCAAAACCTGATGCA +
Preference number: 4 (lower is better)
Translates to: TFKVKVAARPRLNRGEVVLGFLF*ESKPDA
Trigger: TGCATCAGGTTTTGATTCGCAGAACAGGAATCCCAA...AACTACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTTAACCTTGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGTCAGAAGGAAATTATTaGAAATGCATAACCCCATCT +
Preference number: 4 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKSEGNY*KCITPS
Trigger: AGATGGGGTTATGCATTTGCAATAATTTCCTTCTGA...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp CTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGACTTCTTAAAGCCTTCCCTTaGTATGAAGTGGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LSFLRGERSEHLQMRTGLLKAFP*YEVVSG
Trigger: ACCTGAGACCACTTCATAGCAAGGGAAGGCTTTAAG...AAGTCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp TTCCAAACCTTGGTCACCCCAGGGTTTCCAAAGGGTAAACAAGCAGCAGGCATTTCTCTTTCTAGTAACTaGTTAAAGCCTTCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: FQTLVTPGFPKGKQAAGISLSSN*LKPSLA
Trigger: AGCAAGGGAAGGCTTTAAGCAGTTACTAGAAAGAGA...AATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGTTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATGTTGACAGGCTCCAGTaGGACTCCCAACTGCCGAGC +
Preference number: 4 (lower is better)
Translates to: ILITISLLMSPSLRCCQDVDRLQ*DSQLPS
Trigger: GCTCGGCAGTTGGGAGTCCCACTGGAGCCTGTCAAC...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACACCCGGGTCTAGGGTTTaGATGTGCTGGAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTPGSRV*MCWRMS
Trigger: TGACATCCTCCAGCACATCCAAACCCTAGACCCGGG...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTTATTCCAAGTTTTCTTaGGCTGCGTATCGACAGGAG +
Preference number: 4 (lower is better)
Translates to: TRYLNLVGGNQHYWWSGFYSKFS*AAYRQE
Trigger: CTCCTGTCGATACGCAGCCCAAGAAAACTTGGAATA...AAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCGCCAGGTGCTGTGAGTaGTTACGTTTCCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLARCCE*LRFQMQ
Trigger: CTGCATCTGGAAACGTAACCACTCACAGCACCTGGC...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGATACATATGTACAGCTaGGTCAGTAAAGGTAAAACC +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMIHMYS*VSKGKT
Trigger: GGTTTTACCTTTACTGACCCAGCTGTACATATGTAT...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGGTAGATAGTATGCAATaGAAAACTGAGCCGGCAACA +
Preference number: 4 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLVDSMQ*KTEPAT
Trigger: TGTTGCCGGCTCAGTTTTCCATTGCATACTATCTAC...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp GCAGGTTCAAATCCTTTGACTTTGGATTTGACTGATGAGGAACATGGACAGTGGTTCCATTATCATGGATaGTTCACCTGCCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: AGSNPLTLDLTDEEHGQWFHYHG*FTCLEG
Trigger: GCCTTCAAGGCAGGTGAATCATCCATGATAATGGAA...CCACTGTCCATGTTCCTCATCAGTCAAATCCAAAGTCAAAGGATTTGAACCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACAACCAACTTACACAGGTaGTACAGGCTTCCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTTNLHR*YRLPGA
Trigger: GGCTCCAGGAAGCCTGTATCACCTGTGTAAGTTGGT...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR TCA 90 bp TACAAAGACTTTATTAGGCCAGTGCCCGGCTCAAAGTTAGCATGCCACACAAAACGAAGAGCTGCATCTTaGTCATCATGGACAGATACT +
Preference number: 4 (lower is better)
Translates to: YKDFIRPVPGSKLACHTKRRAAS*SSWTDT
Trigger: AGTATCTGTCCATGATGATCAAGATGCAGCTCTTCG...TTTTGTGTGGCATGCTAACTTTGAGCCGGGCACTGGCCTAATAAAGTCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp TACAAAGACTTTATTAGGCCAGTGCCCGGCTCAAAGTTAGCATGCCACACAAAACCTGCAGCCTGTTTTTaGGCTAAGAATGTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: YKDFIRPVPGSKLACHTKPAACF*AKNVVD
Trigger: GTCAACAACATTCTTAGCTCAAAAACAGGCTGCAGG...TTTTGTGTGGCATGCTAACTTTGAGCCGGGCACTGGCCTAATAAAGTCTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp CACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTCCATTACAAGGAACGTaGTCTGAAAAGAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: HTVFKLSRRQPALLVEWLPLQGT*SEKNLF
Trigger: AAAGAGGTTCTTTTCAGAGCACGTTCCTTGTAATGG...AAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp CGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTCCATTACAAGGAACGTaGTCTGAAAAGAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: RYLNLVGGNQHYWWSGFPPLQGT*SEKNLF
Trigger: AAAGAGGTTCTTTTCAGAGCACGTTCCTTGTAATGG...AGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp CACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTGTCGGAGAGAGGATTaGAGTACTGGTCAATATATA +
Preference number: 4 (lower is better)
Translates to: HTVFKLSRRQPALLVEWLCRRED*STGQYI
Trigger: TATATATTGACCAGTACTGCAATCCTCTCTCCGACA...AAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCGGTGGCGACTGTTTATaGCCCGAAGGGTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLGGDCL*PEGFCK
Trigger: TTTGCAAAACCCTTCGGGGCATAAACAGTCGCCACC...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGGGTGGCGACTGTTTATaGCCCGAAGGGTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMGGDCL*PEGFCK
Trigger: TTTGCAAAACCCTTCGGGGCATAAACAGTCGCCACC...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATCACCCCATACAGTGCTaGAGTCACGTGCTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: ILITISLLMSPSLRCCQDHPIQC*SHVLAD
Trigger: ATCGGCCAGCACGTGACTGCAGCACTGTATGGGGTG...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp AAGAACCTGGTTTTCTTTCAAAGCATGAGCAGTTCTCATTTTACAACATGTGTTCACCCCATACAGTGCTaGAGTCACGTGCTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: KNLVFFQSMSSSHFTTCVHPIQC*SHVLAD
Trigger: ATCGGCCAGCACGTGACTGCAGCACTGTATGGGGTG...AACACATGTTGTAAAATGAGAACTGCTCATGCTTTGAAAGAAAACCAGGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGTCTAGGGTTTGGATGTaGTGGAGGATGTCAAGCACC +
Preference number: 4 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMSRVWM*WRMSST
Trigger: GGTGCTTGACATCCTCCAGCACATCCAAACCCTAGA...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACACCGGATCTCCAGCTCTaGGTTTGGGATGTAGTGAGT +
Preference number: 4 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTPDLQL*VWDVVS
Trigger: ACTCACTACATCCCAAACGCAGAGCTGGAGATCCGG...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTCAGAAGGAAATTATTaGAAATGCATAACCCCATCT +
Preference number: 4 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMSEGNY*KCITPS
Trigger: AGATGGGGTTATGCATTTGCAATAATTTCCTTCTGA...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp GCAGGTTCAAATCCTTTGACTTTGGATTTGACTGATGAGGAACATGGACAGTGGATCACACGGAAACAGTaGTCTGAAGACATTCTGGAC +
Preference number: 4 (lower is better)
Translates to: AGSNPLTLDLTDEEHGQWITRKQ*SEDILD
Trigger: GTCCAGAATGTCTTCAGAGCACTGTTTCCGTGTGAT...CCACTGTCCATGTTCCTCATCAGTCAAATCCAAAGTCAAAGGATTTGAACCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp ATAGCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACAGGAGCTGGTATGACTaGTCGATGCCTTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: IAHNFTSEYATNFRVKRHRSWYD*SMPSRF
Trigger: GAAGCGGGAAGGCATCGACCAGTCATACCAGCTCCT...GTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACAAACCAGCACTACTGGTaGAGTGGCTTTCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTNQHYW*SGFPGA
Trigger: TGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTT...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATAGCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACGGCAACCAGCACTACTaGTGGAGTGGCTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: IAHNFTSEYATNFRVKRHGNQHY*WSGFPG
Trigger: ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCC...GTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACAGTCAAGCACCTTCTCTaGCCAGATTCCCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTVKHLL*PDSQVE
Trigger: TTCCACCTGGGAATCTGGCCAGAGAAGGTGCTTGAC...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AAGAGAAGGGAGACTCACACTGAAGGCATTCTTGTCTCTTACCAGCTTCCACAGTTACAGGAATTTGATTaGCATAGACAGTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: KRRETHTEGILVSYQLPQLQEFD*HRQWPI
Trigger: GATTGGCCACTGTCTATGCCAATCAAATTCCTGTAA...CTGTGGAAGCTGGTAAGAGACAAGAATGCCTTCAGTGTGAGTCTCCCTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
3UTR CAA 72 bp GAAAGTCACGACGCACAGTACTGTGCGTCACAGGTATaGAGAAACACCACCATAGAGTCAATTGACTTTGTT +
Preference number: 4 (lower is better)
Translates to: ESHDAQYCASQV*RNTTIESIDFV
Trigger: AACAAAGTCAATTGACTCTATGGTGGTGTTTCTCAATACCTGTGACGCACAGTACTGTGCGTCGTGACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACAAGAGCAGAGACATGCTaGTTGGGATTCCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTRAETC*LGFLFC
Trigger: GCAGAACAGGAATCCCAATCAGCATGTCTCTGCTCT...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGCTTCCTGGAGCCCCATaGAGCATTCATGAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMLPGAP*SIHEER
Trigger: TCTTTCTTCATGAATGCTTCATGGGGCTCCAGGAAG...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp CAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGAATACTGCATGCAGATCTAACCCAGCTTTTTaGCGAACTTTATACTCTTCC +
Preference number: 4 (lower is better)
Translates to: QRVNKQQAFNMGENTACRSNPAF*RTLYSS
Trigger: GGAAGAGTATAAAGTTCGGCAAAAAGCTGGGTTAGA...TCTGCATGCAGTATTCTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp TTCTGGACACATCGTATACAGCACAGCCATTCAAATCAACGGCAACAGAACGCACCATTACAAGGAACGTaGTCTGAAAAGAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: FWTHRIQHSHSNQRQQNAPLQGT*SEKNLF
Trigger: AAAGAGGTTCTTTTCAGAGCACGTTCCTTGTAATGG...TGCGTTCTGTTGCCGTTGATTTGAATGGCTGTGCTGTATACGATGTGTCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp ATAGCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACCTGGTCCGGGTACATTaGCAGATAGAGATCCAGCGA +
Preference number: 4 (lower is better)
Translates to: IAHNFTSEYATNFRVKRHLVRVH*QIEIQR
Trigger: TCGCTGGATCTCTATCTGGCAATGTACCCGGACCAG...GTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGGAAATTATTGCAAATaGATAACCCCATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGGNYCK*ITPSVQ
Trigger: CTGGACAGATGGGGTTATGCATTTGCAATAATTTCC...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCCGACTCATAGTCATCTaGCTGCTGAAGAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLRLIVI*LLKKGL
Trigger: AAGGCCTTTCTTCAGCAGCCAGATGACTATGAGTCG...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTAGAGGATTGCAGTACTaGTCAATATATACAGCACCT +
Preference number: 4 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGRGLQY*SIYTAP
Trigger: AGGTGCTGTATATATTGACCAGTACTGCAATCCTCT...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGCTGTCAATTTGGGCCTaGATGTCTTTGAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMLSIWA*MSLRLM
Trigger: CATCAGCCTCAAAGACATCCAGGCCCAAATTGACAG...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCAAAGGACATAGTTCATaGCATCCAGCACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLKGHSS*HPAPGS
Trigger: AGAGCCAGGTGCTGGATGCCATGAACTATGTCCTTT...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATAGCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACGCCCCTTCTGCGCCTTaGCACCACCTTAATAAGAAG +
Preference number: 4 (lower is better)
Translates to: IAHNFTSEYATNFRVKRHAPSAP*HHLNKK
Trigger: CTTCTTATTAAGGTGGTGCCAAGGCGCAGAAGGGGC...GTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACAAGGGTTTGGATGTGCTaGAGGATGTCAAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTRVWMC*RMSSTF
Trigger: GAAGGTGCTTGACATCCTCCAGCACATCCAAACCCT...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACAAGGGTTTGGATGTGCTaGAGGATGTCAAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTRVWMC*RMSSTF
Trigger: GAAGGTGCTTGACATCCTCCAGCACATCCAAACCCT...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp CTGCTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGAATACATATGTACAGCTaGGTCAGTAAAGGTAAAACC +
Preference number: 4 (lower is better)
Translates to: LLSFLRGERSEHLQMRTGIHMYS*VSKGKT
Trigger: GGTTTTACCTTTACTGACCCAGCTGTACATATGTAT...TCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp GCAATTGTCCCACATCCAAATTTTGCATTTTGTCCAGTTGATGTCTCTCCTTCCGCTCTGAAGACATTCTaGACACATCGTATACAGCAC +
Preference number: 4 (lower is better)
Translates to: AIVPHPNFAFCPVDVSPSALKTF*THRIQH
Trigger: GTGCTGTATACGATGTGTCCAGAATGTCTTCAGAGC...GGAAGGAGAGACATCAACTGGACAAAATGCAAAATTTGGATGTGGGACAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp TTGGAAAAGCAGATTCCAACACGCACATCTCCTTTCACACAAGTCCAACACTCTTTCCCCTTTATACAGTaGAATGCTAAGTGCCTACAC +
Preference number: 4 (lower is better)
Translates to: LEKQIPTRTSPFTQVQHSFPFIQ*NAKCLH
Trigger: GTGTAGGCACTTAGCATTCCACTGTATAAAGGGGAA...AGAGTGTTGGACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp AAGAACCTGGTTTTCTTTCAAAGCATGAGCAGTTCTCATTTTACAACATGTGTTACAGCTGGAGCTCAGTaGTTCCTGGAGACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: KNLVFFQSMSSSHFTTCVTAGAQ*FLETQG
Trigger: TCCCTGAGTCTCCAGGAACCACTGAGCTCCAGCTGT...AACACATGTTGTAAAATGAGAACTGCTCATGCTTTGAAAGAAAACCAGGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATACTCTTCCAACCAATTaGCGTAGTCGGTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ILITISLLMSPSLRCCQDTLPTN*RSRWGC
Trigger: ACAGCCCCACCGACTACGTCAATTGGTTGGAAGAGT...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGTTCCATTATCATGGATaGTTCACCTGCCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMFHYHG*FTCLEG
Trigger: GCCTTCAAGGCAGGTGAATCATCCATGATAATGGAA...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATCAGGAGCGTCGACTGTaGGACCTCATGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: ILITISLLMSPSLRCCQDQERRL*DLMKTE
Trigger: TTCTGTCTTCATGAGGTCTCACAGTCGACGCTCCTG...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp AAACATGACGCCTGGCAAAACCGGTCTGATTCTAAGGTAAACTCATTTTGGACATTTCATATATCAAGATaGCACACCCGCTGCACACTT +
Preference number: 4 (lower is better)
Translates to: KHDAWQNRSDSKVNSFWTFHISR*HTRCTL
Trigger: AAGTGTGCAGCGGGTGTGTCATCTTGATATATGAAA...TGTCCAAAATGAGTTTACCTTAGAATCAGACCGGTTTTGCCAGGCGTCATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp ATAGCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACAATGGGGATCTGTTATaGGTCTCAGGCAGGCGACAT +
Preference number: 4 (lower is better)
Translates to: IAHNFTSEYATNFRVKRHNGDLL*VSGRRH
Trigger: ATGTCGCCTGCCTGAGACTCATAACAGATCCCCATT...GTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACATTTTTGCGCTCAATGTaGTCTAGAGTGTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTFLRSM*SRVCCT
Trigger: GGTGCAGCACACTCTAGAGCACATTGAGCGCAAAAA...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACATTTTTGCGCTCAATGTaGTCTAGAGTGTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTFLRSM*SRVCCT
Trigger: GGTGCAGCACACTCTAGAGCACATTGAGCGCAAAAA...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATCAAGTTTTCTTGGGCTaGGTATCGACAGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: ILITISLLMSPSLRCCQDQVFLG*VSTGAV
Trigger: GACGGCTCCTGTCGATACGCAGCCCAAGAAAACTTG...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGGAAATTTCAGAAGGAAATTATTaGAAATGCATAACCCCATCT +
Preference number: 4 (lower is better)
Translates to: TQSSLGTEHVPQRNQKEISEGNY*KCITPS
Trigger: AGATGGGGTTATGCATTTGCAATAATTTCCTTCTGA...AATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ACATTCAAGGTTAAAGTCGCTGCTAGACCAAGGCTAAACCGTGGCGAGGTAGTTTCAGAAGGAAATTATTaGAAATGCATAACCCCATCT +
Preference number: 4 (lower is better)
Translates to: TFKVKVAARPRLNRGEVVSEGNY*KCITPS
Trigger: AGATGGGGTTATGCATTTGCAATAATTTCCTTCTGA...AACTACCTCGCCACGGTTTAGCCTTGGTCTAGCAGCGACTTTAACCTTGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CCA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACACTGTCAATTTGGGCCTaGATGTCTTTGAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTLSIWA*MSLRLM
Trigger: CATCAGCCTCAAAGACATCCAGGCCCAAATTGACAG...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp AAGAACCTGGTTTTCTTTCAAAGCATGAGCAGTTCTCATTTTACAACATGTGTTAGAGCAGAGACATGCTaGTTGGGATTCCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KNLVFFQSMSSSHFTTCVRAETC*LGFLFC
Trigger: GCAGAACAGGAATCCCAATCAGCATGTCTCTGCTCT...AACACATGTTGTAAAATGAGAACTGCTCATGCTTTGAAAGAAAACCAGGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACACCTTAATAAGAAGTaGCTTGGGAAGTTGACAGGC +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTHLNKK*LGKLTG
Trigger: GCCTGTCAACTTCCCAAGTCACTTCTTATTAAGGTG...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ATAGCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACTTTTTGCGCTCAATGTaGTCTAGAGTGTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: IAHNFTSEYATNFRVKRHFLRSM*SRVCCT
Trigger: GGTGCAGCACACTCTAGAGCACATTGAGCGCAAAAA...GTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCTCTCCATCTCTAAGATaGTGCCAAGATAGCACACAA +
Preference number: 4 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLSPSLR*CQDSTQ
Trigger: TTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGA...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATATGGCATCCAGCACCTaGCTCTGGAGTTCTATTTCC +
Preference number: 4 (lower is better)
Translates to: ILITISLLMSPSLRCCQDMASST*LWSSIS
Trigger: GGAAATAGAACTCCAGAGCCAGGTGCTGGATGCCAT...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACATATTCCAAGTTTTCTTaGGCTGCGTATCGACAGGAG +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTYSKFS*AAYRQE
Trigger: CTCCTGTCGATACGCAGCCCAAGAAAACTTGGAATA...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AAGAACCTGGTTTTCTTTCAAAGCATGAGCAGTTCTCATTTTACAACATGTGTTGGCAGGCCATTTGCGTaGTTTCTCTGGATAAGTTCC +
Preference number: 4 (lower is better)
Translates to: KNLVFFQSMSSSHFTTCVGRPFA*FLWISS
Trigger: GGAACTTATCCAGAGAAACCACGCAAATGGCCTGCC...AACACATGTTGTAAAATGAGAACTGCTCATGCTTTGAAAGAAAACCAGGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp ATAGCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACGGTTCTCAATGTCACTaGAGCCATTACAAGGAACGT +
Preference number: 4 (lower is better)
Translates to: IAHNFTSEYATNFRVKRHGSQCH*SHYKER
Trigger: ACGTTCCTTGTAATGGCTTCAGTGACATTGAGAACC...GTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp ATAGCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACCCATTCGATTCCCCTTaGACTTCAGTTGGTCGTAAA +
Preference number: 4 (lower is better)
Translates to: IAHNFTSEYATNFRVKRHPFDSP*TSVGRK
Trigger: TTTACGACCAACTGAAGTTCAAGGGGAATCGAATGG...GTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGCTGCGAATCAAAACCTaGTGCATATATAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMLRIKT*CIYKLR
Trigger: CCTCAACTTATATATGCATCAGGTTTTGATTCGCAG...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp AAGAACCTGGTTTTCTTTCAAAGCATGAGCAGTTCTCATTTTACAACATGTGTTGGGTGTGAGATTTCTTaGGGCTCCACGTTATATTCC +
Preference number: 4 (lower is better)
Translates to: KNLVFFQSMSSSHFTTCVGCEIS*GSTLYS
Trigger: GGAATATAACGTGGAGCCTCAAGAAATCTCACACCC...AACACATGTTGTAAAATGAGAACTGCTCATGCTTTGAAAGAAAACCAGGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACAAGTGAATACAAAGAATaGTTACAGGAGCGTCGACTG +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTSEYKE*LQERRL
Trigger: CAGTCGACGCTCCTGTAATCATTCTTTGTATTCACT...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp GCAATTGTCCCACATCCAAATTTTGCATTTTGTCCAGTTGATGTCTCTCCTTCCTGGAGGAATTGTAGATaGGTATGGAAAAATCCATTC +
Preference number: 4 (lower is better)
Translates to: AIVPHPNFAFCPVDVSPSWRNCR*VWKNPF
Trigger: GAATGGATTTTTCCATACTCATCTACAATTCCTCCA...GGAAGGAGAGACATCAACTGGACAAAATGCAAAATTTGGATGTGGGACAATTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCGAAGACCATGGAGTATaGCTTCTAAGAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLEDHGV*LLRANI
Trigger: AATGTTTGCTCTTAGAAGTCATACTCCATGGTCTTC...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp GCAATTGTCCCACATCCAAATTTTGCATTTTGTCCAGTTGATGTCTCTCCTTCCAGTGCAATCTTTGCATaGCAACCAGATAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: AIVPHPNFAFCPVDVSPSSAIFA*QPDNSQ
Trigger: TTGAGAATTATCTGGTTGTCATGCAAAGATTGCACT...GGAAGGAGAGACATCAACTGGACAAAATGCAAAATTTGGATGTGGGACAATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCCCATTACAAGGAACGTaGTCTGAAAAGAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLPLQGT*SEKNLF
Trigger: AAAGAGGTTCTTTTCAGAGCACGTTCCTTGTAATGG...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACATTGGGATTCCTGTTCTaGGAATCAAAACCTGATGCA +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTLGFLF*ESKPDA
Trigger: TGCATCAGGTTTTGATTCGCAGAACAGGAATCCCAA...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGGGAAATTATTGCAAATaGATAACCCCATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMGNYCK*ITPSVQ
Trigger: CTGGACAGATGGGGTTATGCATTTGCAATAATTTCC...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCGGAAATTATTGCAAATaGATAACCCCATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLGNYCK*ITPSVQ
Trigger: CTGGACAGATGGGGTTATGCATTTGCAATAATTTCC...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAGAAAACCAACAATTaGAACTCTCAGCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTQKTNN*NSQHAQ
Trigger: CTGAGCATGCTGAGAGTTGCAATTGTTGGTTTTCTG...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CCA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATACGATGCTGTCAATTTaGGCCTGGATGTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: ILITISLLMSPSLRCCQDTMLSI*AWMSLR
Trigger: CCTCAAAGACATCCAGGCCCAAATTGACAGCATCGT...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAAACTCCAGATCTTCTaGATACCGGATCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ILITISLLMSPSLRCCQDKLQIF*IPDLQL
Trigger: GAGCTGGAGATCCGGTATCCAGAAGATCTGGAGTTT...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp AAGAACCTGGTTTTCTTTCAAAGCATGAGCAGTTCTCATTTTACAACATGTGTTGTGACAGTCTGTACGTaGCCTGCAAAGCCTAAAATC +
Preference number: 4 (lower is better)
Translates to: KNLVFFQSMSSSHFTTCVVTVCT*PAKPKI
Trigger: GATTTTAGGCTTTGCAGGCCACGTACAGACTGTCAC...AACACATGTTGTAAAATGAGAACTGCTCATGCTTTGAAAGAAAACCAGGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR TCA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGTGGAGGAATTGTAGATaGGTATGGAAAAATCCATTC +
Preference number: 4 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMWRNCR*VWKNPF
Trigger: GAATGGATTTTTCCATACTCATCTACAATTCCTCCA...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCTGGAGGAATTGTAGATaGGTATGGAAAAATCCATTC +
Preference number: 4 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLWRNCR*VWKNPF
Trigger: GAATGGATTTTTCCATACTCATCTACAATTCCTCCA...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR TCA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGATCCGAAGAGAGGTaGGAGACATTCTACTCAAGT +
Preference number: 4 (lower is better)
Translates to: ILITISLLMSPSLRCCQDRSEER*ETFYSS
Trigger: ACTTGAGTAGAATGTCTCTCACCTCTCTTCGGATCT...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR GCA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACATGTCGGAGAGAGGATTaGAGTACTGGTCAATATATA +
Preference number: 4 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTCRRED*STGQYI
Trigger: TATATATTGACCAGTACTGCAATCCTCTCTCCGACA...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATTCTTTCACTGTCAGCTaGTTGCCTTTCCCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: ILITISLLMSPSLRCCQDSFTVS*LPFPKA
Trigger: TGCTTTTGGGAAAGGCAAGCAGCTGACAGTGAAAGA...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR GCA 90 bp ATAGCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACTCTCCATCTCTAAGATaGTGCCAAGATAGCACACAA +
Preference number: 4 (lower is better)
Translates to: IAHNFTSEYATNFRVKRHSPSLR*CQDSTQ
Trigger: TTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGA...GTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CCA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATTATTCCAAGTTTTCTTaGGCTGCGTATCGACAGGAG +
Preference number: 4 (lower is better)
Translates to: ILITISLLMSPSLRCCQDYSKFS*AAYRQE
Trigger: CTCCTGTCGATACGCAGCCCAAGAAAACTTGGAATA...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR GCA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATTGTCGGAGAGAGGATTaGAGTACTGGTCAATATATA +
Preference number: 4 (lower is better)
Translates to: ILITISLLMSPSLRCCQDCRRED*STGQYI
Trigger: TATATATTGACCAGTACTGCAATCCTCTCTCCGACA...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS GCA 90 bp ACACCTTCCCGCTGCTCTGGCACAGCTCGCGCAGCCGCCGGCAGGTaGTGGAGACACGGCCGATGTCGGCGGCCGTCAGCGAGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: TPSRCSGTARAAAGR*WRHGRCRRPSASRS
Trigger: GCTGCGGCTCGCTGACGGCCGCCGACATCGGCCGTGTCTCCAGCACCTGCCGGCGGCTGCGCGAGCTGTGCCAGAGCAGCGGGAAGGTGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000551458.1
ENST00000622495.5
CDS GCA 90 bp GGGAAGGCCACCTCACCCGGAACTGCTCCTTCCACACCTTCCCGCTaGTCTGGCACAGCTCGCGCAGCCGCCGGCAGGTGCTGGAGACAC +
Preference number: 5 (lower is better)
Translates to: GKATSPGTAPSTPSR*SGTARAAAGRCWRH
Trigger: GTGTCTCCAGCACCTGCCGGCGGCTGCGCGAGCTGTGCCAGAGCAGCGGGAAGGTGTGGAAGGAGCAGTTCCGGGTGAGGTGGCCTTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000551458.1
ENST00000622495.5
CDS-3UTR CAA 90 bp GGAGGCCAGGGAGCACTAGGGGGCCCCCAGGTGTTCATCCGGTTCCCTTCTAGTCGCCAGGGCGGCACCTaGGGCTGCGTATCGACAGGA +
Preference number: 5 (lower is better)
Translates to: GGQGALGGPQVFIRFPSSRQGGT*GCVSTG
Trigger: TCCTGTCGATACGCAGCCCAAGGTGCCGCCCTGGCG...ACTAGAAGGGAACCGGATGAACACCTGGGGGCCCCCTAGTGCTCCCTGGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CAA 90 bp GGCATAGACAGTGGCCAATCAGATGTCCGGGCTGTGGGAGCGGAGGCCCTGGGGCCTGGTCCGGGTACATaGCCAGATAGAGATCCAGCG +
Preference number: 5 (lower is better)
Translates to: GIDSGQSDVRAVGAEALGPGPGT*PDRDPA
Trigger: CGCTGGATCTCTATCTGGCAATGTACCCGGACCAGG...CCCCAGGGCCTCCGCTCCCACAGCCCGGACATCTGATTGGCCACTGTCTATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CAA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCCTGGCAGGCCGAGAGTaGGTGGAGCTCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPLAGRE*VELQSC
Trigger: GCAGCTCTGGAGCTCCACCAACTCTCGGCCTGCCAG...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCGATGATTCACCTGCCTaGAAGGCCAAGCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFDDSPA*KAKLGW
Trigger: CCACCCCAGCTTGGCCTTCAAGGCAGGTGAATCATC...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCCGGAGTCCCGTTCTCTaGGAAGATAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFRSPVL*EDSSSS
Trigger: GCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCG...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGCGGAGTCCCGTTCTCTaGGAAGATAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRRSPVL*EDSSSS
Trigger: GCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCG...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp ACAGCCTTGGGAGGCCAGGGAGCACTAGGGGGCCCCCAGGTGTTCATCCGGTTCAACCTTACTGTACACTaGCGGGCTCTCAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: TALGGQGALGGPQVFIRFNLTVH*RALRCS
Trigger: GGAGCACCTGAGAGCCCGCAAGTGTACAGTAAGGTT...GAACCGGATGAACACCTGGGGGCCCCCTAGTGCTCCCTGGCCTCCCAAGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CAA 90 bp ACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACCTGGTCCGGGTACATaGCCAGATAGAGATCCAGCG +
Preference number: 5 (lower is better)
Translates to: TTGGVAFLVQQVPRAPWRPGPGT*PDRDPA
Trigger: CGCTGGATCTCTATCTGGCAATGTACCCGGACCAGG...TCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp CAGAAGACGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGCTTGCAGGACCCTGGCGGCTaGGAAAAGCAGATTCCAACA +
Preference number: 5 (lower is better)
Translates to: QKTPQQASSCCRQDPGGLQDPGG*EKQIPT
Trigger: TGTTGGAATCTGCTTTTCCAAGCCGCCAGGGTCCTG...CAAGCCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCGTCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp ACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGATGGGCCTGGATGTCTTaGAGGCTGATGTCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: TTGGVAFLVQQVPRAPWRWAWMS*RLMSER
Trigger: TCTCTCCGACATCAGCCTCAAAGACATCCAGGCCCA...TCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGATGCCCCGAAGGGTTTaGCAAACAAGCTCCACGATG +
Preference number: 5 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRMPRRV*QTSSTM
Trigger: CATCGTGGAGCTTGTTTGCAAAACCCTTCGGGGCAT...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp AGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAACCTGGTCCGGGTACATaGCCAGATAGAGATCCAGCG +
Preference number: 5 (lower is better)
Translates to: RSRGLRGDVFFRSPVLLEPGPGT*PDRDPA
Trigger: CGCTGGATCTCTATCTGGCAATGTACCCGGACCAGG...TTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTTCTCCAGCTCTGCGTTaGGGATGTAGTGAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRASPALR*GCSECQ
Trigger: CTGGCACTCACTACATCCCAAACGCAGAGCTGGAGA...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCCGGAGTCCCGTTCTCTaGGAAGATAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPRSPVL*EDSSSS
Trigger: GCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCG...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp AGCCAGTGCCGTCCGAACACACGGTCAGGCTTTCCCAGAAGACGCCACAACAGGCGGAGTCCCGTTCTCTaGGAAGATAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SQCRPNTRSGFPRRRHNRRSPVL*EDSSSS
Trigger: GCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCG...CCTGTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp GGGGCCCCCAGGTGTTCATCCGGTTCCCTTCTAGTCTGGGAGGAGCCGAGGGCAACACTGAAGGCATTCTaGTCTCTTACCAGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: GAPRCSSGSLLVWEEPRATLKAF*SLTSFH
Trigger: GTGGAAGCTGGTAAGAGACAAGAATGCCTTCAGTGT...TGCCCTCGGCTCCTCCCAGACTAGAAGGGAACCGGATGAACACCTGGGGGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CAA 90 bp ACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACACGATGCTGTCAATTaGGGCCTGGATGTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: TTGGVAFLVQQVPRAPWRHDAVN*GLDVFE
Trigger: CTCAAAGACATCCAGGCCCAAATTGACAGCATCGTG...TCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCACGATGCTGTCAATTaGGGCCTGGATGTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRAHDAVN*GLDVFE
Trigger: CTCAAAGACATCCAGGCCCAAATTGACAGCATCGTG...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp AGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAATGCCCCGAAGGGTTTaGCAAACAAGCTCCACGATG +
Preference number: 5 (lower is better)
Translates to: RSRGLRGDVFFRSPVLLEMPRRV*QTSSTM
Trigger: CATCGTGGAGCTTGTTTGCAAAACCCTTCGGGGCAT...TTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCCCAACTGCCGAGCAATaGTCAAATAGAGCAGAGACA +
Preference number: 5 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFPTAEQ*SNRAET
Trigger: TGTCTCTGCTCTATTTGACAATTGCTCGGCAGTTGG...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GGAGGCCAGGGAGCACTAGGGGGCCCCCAGGTGTTCATCCGGTTCCCTTCTAGTTTCACTGTCAGCTGCTaGCCTTTCCCAAAAGCATCT +
Preference number: 5 (lower is better)
Translates to: GGQGALGGPQVFIRFPSSFTVSC*PFPKAS
Trigger: AGATGCTTTTGGGAAAGGCAAGCAGCTGACAGTGAA...ACTAGAAGGGAACCGGATGAACACCTGGGGGCCCCCTAGTGCTCCCTGGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CAA 90 bp CAGAAGACGCCACAACAGGCTTCGTCCTGCTGCCGTCAGGACCCTGGCGGCTTGCTCTGTAACACCTTCTaGACATTGACCACCCCATAC +
Preference number: 5 (lower is better)
Translates to: QKTPQQASSCCRQDPGGLLCNTF*TLTTPY
Trigger: GTATGGGGTGGTCAATGTCAAGAAGGTGTTACAGAG...CAAGCCGCCAGGGTCCTGACGGCAGCAGGACGAAGCCTGTTGTGGCGTCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS CCA 90 bp TGTCAAGCACCTTCTCTGGCCAGATTCCCAGGTGGAAGTAAAGCCTaGCTTGGAGGAGGAGAAGCTGCACCTGGTCCGGGTACATTGCCA +
Preference number: 5 (lower is better)
Translates to: CQAPSLARFPGGSKA*LGGGEAAPGPGTLP
Trigger: TGGCAATGTACCCGGACCAGGTGCAGCTTCTCCTCCTCCAAGCCAGGCTTTACTTCCACCTGGGAATCTGGCCAGAGAAGGTGCTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp CTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTGGGCCTGGATGTCTTaGAGGCTGATGTCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: LSRRQPALLVEWLSWCSRWAWMS*RLMSER
Trigger: TCTCTCCGACATCAGCCTCAAAGACATCCAGGCCCA...CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp CGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCATGCCCCGAAGGGTTTaGCAAACAAGCTCCACGATG +
Preference number: 5 (lower is better)
Translates to: RGLRGDVFFRSPVLLEDSMPRRV*QTSSTM
Trigger: CATCGTGGAGCTTGTTTGCAAAACCCTTCGGGGCAT...GCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTTTCACTGTCAGCTGCTaGCCTTTCCCAAAAGCATCT +
Preference number: 5 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRAFTVSC*PFPKAS
Trigger: AGATGCTTTTGGGAAAGGCAAGCAGCTGACAGTGAA...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp ACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGAAACACCTTCTTGACATaGACCACCCCATACAGTGCT +
Preference number: 5 (lower is better)
Translates to: TTGGVAFLVQQVPRAPWRNTFLT*TTPYSA
Trigger: AGCACTGTATGGGGTGGTCAATGTCAAGAAGGTGTT...TCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp TGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCTTCCGGTCTGAGTTCACTTACTaGGAGTATGGACTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: WLSWCSRSRGLRGDVFFRSEFTY*EYGLRR
Trigger: CCTCCTTAGTCCATACTCCAAGTAAGTGAACTCAGA...CCGGAAGAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CAA 90 bp GTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACGTCTTCCTGAAAAGAACCTCTTaGAGAACGAGGCTACAATCT +
Preference number: 5 (lower is better)
Translates to: VEWLSWCSRSRGLRGDVFLKRTS*RTRLQS
Trigger: AGATTGTAGCCTCGTTCTCAAAGAGGTTCTTTTCAG...GAAGACGTCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCAACACCTTCTTGACATaGACCACCCCATACAGTGCT +
Preference number: 5 (lower is better)
Translates to: VGGNQHYWWSGFPGAAGPNTFLT*TTPYSA
Trigger: AGCACTGTATGGGGTGGTCAATGTCAAGAAGGTGTT...GGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp CTGCTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGACTGGCAGGCCGAGAGTaGGTGGAGCTCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LLSFLRGERSEHLQMRTGLAGRE*VELQSC
Trigger: GCAGCTCTGGAGCTCCACCAACTCTCGGCCTGCCAG...TCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CAA 90 bp AGCCAGTGCCGTCCGAACACACGGTCAGGCTTTCCCAGAAGACGCCACAACAGGTTGCATTTTGTCCAGTaGATGTCTCTCCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: SQCRPNTRSGFPRRRHNRLHFVQ*MSLLPS
Trigger: GGAGGGAAGGAGAGACATCAACTGGACAAAATGCAA...CCTGTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CAA 90 bp ACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGACTGAAAAGAACCTCTTaGAGAACGAGGCTACAATCT +
Preference number: 5 (lower is better)
Translates to: TTGGVAFLVQQVPRAPWRLKRTS*RTRLQS
Trigger: AGATTGTAGCCTCGTTCTCAAAGAGGTTCTTTTCAG...TCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp CTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGAGAGCAACATTGTCTTaGCAGCTGGGGAAGAGCACA +
Preference number: 5 (lower is better)
Translates to: LSRRQPALLVEWLSWCSRRATLS*QLGKST
Trigger: TGTGCTCTTCCCCAGCTGCAAAGACAATGTTGCTCT...CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGCAGGACCCTGGCGGCTaGGAAAAGCAGATTCCAACA +
Preference number: 5 (lower is better)
Translates to: ETSSSGVPFSWKIAAAAKQDPGG*EKQIPT
Trigger: TGTTGGAATCTGCTTTTCCAAGCCGCCAGGGTCCTG...CTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp GCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGGGCCCAGAAAACCAACAATaGCAACTCTCAGCATGCTCA +
Preference number: 5 (lower is better)
Translates to: AESWWSSRAAQRRAVTLGPENQQ*QLSACS
Trigger: TGAGCATGCTGAGAGTTGCAATTGTTGGTTTTCTGG...GCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp CAGGCCGAGAGTTGGTGGAGCTCCAGAGCTGCACAAAGGCGTGCAGTTACTCTGCCCCTTGAACTTCAGTaGGTCGTAAAGGACATAGTT +
Preference number: 5 (lower is better)
Translates to: QAESWWSSRAAQRRAVTLPLELQ*VVKDIV
Trigger: AACTATGTCCTTTACGACCAACTGAAGTTCAAGGGG...CAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp CCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGTCCTCTCTAGACTCTCCAGCTCTGCGTTaGGGATGTAGTGAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: PVLLEDSSSSKGAMSSLDSPALR*GCSECQ
Trigger: CTGGCACTCACTACATCCCAAACGCAGAGCTGGAGA...GTCTAGAGAGGACATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp ACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTCCGTGGAGAGCAAAACCTCATTTTTaGGTCTTTGAAGACCATGGA +
Preference number: 5 (lower is better)
Translates to: TTGGVAFLVQQVPRAPWRAKPHF*VFEDHG
Trigger: TCCATGGTCTTCAAAGACCAAAAAATGAGGTTTTGC...TCTCCACGGAGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS CCA 90 bp ATGCCCCGAAGGGTTTTGCAAACAAGCTCCACGATGCTGTCAATTTaGGCCTGGATGTCTTTGAGGCTGATGTCGGAGAGAGGATTGCAG +
Preference number: 5 (lower is better)
Translates to: MPRRVLQTSSTMLSI*AWMSLRLMSERGLQ
Trigger: CTGCAATCCTCTCTCCGACATCAGCCTCAAAGACATCCAGGCCCAAATTGACAGCATCGTGGAGCTTGTTTGCAAAACCCTTCGGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS CCA 90 bp ACCTTCTTGACATTGACCACCCCATACAGTGCTGCAGTCACGTGCTaGCCGATCAAGTACTCGCATTCTTTCACTGTCAGCTGCTTGCCT +
Preference number: 5 (lower is better)
Translates to: TFLTLTTPYSAAVTC*PIKYSHSFTVSCLP
Trigger: AGGCAAGCAGCTGACAGTGAAAGAATGCGAGTACTTGATCGGCCAGCACGTGACTGCAGCACTGTATGGGGTGGTCAATGTCAAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000548840.1
ENST00000622495.5
CDS CCA 90 bp TGTGGACGTTCATGTTCCGGATCCACTCGTGTCCCATCATGCAGGTaGGGTCCCAGCCGTAGATCACACAGTTATAGCCATACCTCTTAT +
Preference number: 5 (lower is better)
Translates to: CGRSCSGSTRVPSCR*GPSRRSHSYSHTSY
Trigger: ATAAGAGGTATGGCTATAACTGTGTGATCTACGGCTGGGACCCCACCTGCATGATGGGACACGAGTGGATCCGGAACATGAACGTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000547806.1
ENST00000548840.1
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCTGGGCCTGGATGTCTTaGAGGCTGATGTCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFWAWMS*RLMSER
Trigger: TCTCTCCGACATCAGCCTCAAAGACATCCAGGCCCA...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAACCTGGTCCGGGTACATaGCCAGATAGAGATCCAGCG +
Preference number: 5 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSEPGPGT*PDRDPA
Trigger: CGCTGGATCTCTATCTGGCAATGTACCCGGACCAGG...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGTCCCGAGGGCTATCAGAAGGAAATTATaGCAAATGCATAACCCCATC +
Preference number: 5 (lower is better)
Translates to: ATSTTGGVAFLVQQVPRAIRRKL*QMHNPI
Trigger: GATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT...AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp TTTGATTGGCATAGACAGTGGCCAATCAGATGTCCGGGCTGTGGGAGCGGAGGCAGGACTTACAGGAATTaGATTGGCATAGACAGTGGC +
Preference number: 5 (lower is better)
Translates to: FDWHRQWPIRCPGCGSGGRTYRN*IGIDSG
Trigger: GCCACTGTCTATGCCAATCAAATTCCTGTAAGTCCT...GCCTCCGCTCCCACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS TCA 90 bp CTTCTGCGCCTTGGCACCACCTTAATAAGAAGTGACTTGGGAAGTTaGCAGGCTCCAGTGGGACTCCCAACTGCCGAGCAATTGTCAAAT +
Preference number: 5 (lower is better)
Translates to: LLRLGTTLIRSDLGS*QAPVGLPTAEQLSN
Trigger: ATTTGACAATTGCTCGGCAGTTGGGAGTCCCACTGGAGCCTGTCAACTTCCCAAGTCACTTCTTATTAAGGTGGTGCCAAGGCGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS GCA 90 bp AACACCTTCTTGACATTGACCACCCCATACAGTGCTGCAGTCACGTaGTGGCCGATCAAGTACTCGCATTCTTTCACTGTCAGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: NTFLTLTTPYSAAVT*WPIKYSHSFTVSCL
Trigger: CAAGCAGCTGACAGTGAAAGAATGCGAGTACTTGATCGGCCAGCACGTGACTGCAGCACTGTATGGGGTGGTCAATGTCAAGAAGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000548840.1
ENST00000622495.5
CDS CCA 90 bp CGAAGGGTTTTGCAAACAAGCTCCACGATGCTGTCAATTTGGGCCTaGATGTCTTTGAGGCTGATGTCGGAGAGAGGATTGCAGTACTGG +
Preference number: 5 (lower is better)
Translates to: RRVLQTSSTMLSIWA*MSLRLMSERGLQYW
Trigger: CCAGTACTGCAATCCTCTCTCCGACATCAGCCTCAAAGACATCCAGGCCCAAATTGACAGCATCGTGGAGCTTGTTTGCAAAACCCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp CGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTTGGGCCTGGATGTCTTaGAGGCTGATGTCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: RYLNLVGGNQHYWWSGFPWAWMS*RLMSER
Trigger: TCTCTCCGACATCAGCCTCAAAGACATCCAGGCCCA...AGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp CAGGAATTTGATTGGCATAGACAGTGGCCAATCAGATGTCCGGGCTGTGGGAGCCTCTGTAACACCTTCTaGACATTGACCACCCCATAC +
Preference number: 5 (lower is better)
Translates to: QEFDWHRQWPIRCPGCGSLCNTF*TLTTPY
Trigger: GTATGGGGTGGTCAATGTCAAGAAGGTGTTACAGAG...GCTCCCACAGCCCGGACATCTGATTGGCCACTGTCTATGCCAATCAAATTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CAA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGGTGGCTTTCCAAACCTaGGTCACCCCAGGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLVAFQT*VTPGFP
Trigger: TGGAAACCCTGGGGTGACCAAGGTTTGGAAAGCCAC...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp CGAGGGCTCCGTGGAGACGTCTTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCATCAGAAGGAAATTATaGCAAATGCATAACCCCATC +
Preference number: 5 (lower is better)
Translates to: RGLRGDVFFRSPVLLEDSIRRKL*QMHNPI
Trigger: GATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT...GCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGGAGCCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp CTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTGCAGCAGGGCAAAACCTCATTTTTaGGTCTTTGAAGACCATGGA +
Preference number: 5 (lower is better)
Translates to: LSRRQPALLVEWLSWCSRAKPHF*VFEDHG
Trigger: TCCATGGTCTTCAAAGACCAAAAAATGAGGTTTTGC...CCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp ATTCTGGACACATCGTATACAGCACAGCCATTCAAATCAACGGCAACAGAACGCGTGGCTTTCCAAACCTaGGTCACCCCAGGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: ILDTSYTAQPFKSTATERVAFQT*VTPGFP
Trigger: TGGAAACCCTGGGGTGACCAAGGTTTGGAAAGCCAC...GCGTTCTGTTGCCGTTGATTTGAATGGCTGTGCTGTATACGATGTGTCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CAA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAACACGATGCTGTCAATTaGGGCCTGGATGTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSEHDAVN*GLDVFE
Trigger: CTCAAAGACATCCAGGCCCAAATTGACAGCATCGTG...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp TTCTTCCGGAGTCCCGTTCTCTTGGAAGATAGCAGCAGCAGCAAAGGTGCAATGCCCCTTGAACTTCAGTaGGTCGTAAAGGACATAGTT +
Preference number: 5 (lower is better)
Translates to: FFRSPVLLEDSSSSKGAMPLELQ*VVKDIV
Trigger: AACTATGTCCTTTACGACCAACTGAAGTTCAAGGGG...CATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GCAGCTGGGGAAGAGCACACGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACCAACTGCCGAGCAATaGTCAAATAGAGCAGAGACA +
Preference number: 5 (lower is better)
Translates to: AAGEEHTVFKLSRRQPALPTAEQ*SNRAET
Trigger: TGTCTCTGCTCTATTTGACAATTGCTCGGCAGTTGG...TAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTGCTCTTCCCCAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp CTCAGTTTTCTCCGTGGGGAAAGATCGGAACACTTACAAATGAGAACGGGACTTTGTCCTCAAACGAAATaGGGCAGGCCATTTGCGTGG +
Preference number: 5 (lower is better)
Translates to: LSFLRGERSEHLQMRTGLCPQTK*GRPFAW
Trigger: CCACGCAAATGGCCTGCCCAATTTCGTTTGAGGACA...AAGTCCCGTTCTCATTTGTAAGTGTTCCGATCTTTCCCCACGGAGAAAACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CAA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACATGGCGAGGTAGTTGCTaGCGCCGCAGAGTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTWRGSC*RRRVWV
Trigger: CACCCACACTCTGCGGCGCAAGCAACTACCTCGCCA...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CAA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGGATGATTCACCTGCCTaGAAGGCCAAGCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMDDSPA*KAKLGW
Trigger: CCACCCCAGCTTGGCCTTCAAGGCAGGTGAATCATC...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp AGACAGAATGTCACAAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGCCAACTGCCGAGCAATaGTCAAATAGAGCAGAGACA +
Preference number: 5 (lower is better)
Translates to: RQNVTNCHHRTSIQAMPLPTAEQ*SNRAET
Trigger: TGTCTCTGCTCTATTTGACAATTGCTCGGCAGTTGG...CAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp ACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGGAAATTAACACCTTCTTGACATaGACCACCCCATACAGTGCT +
Preference number: 5 (lower is better)
Translates to: TQSSLGTEHVPQRNQKEINTFLT*TTPYSA
Trigger: AGCACTGTATGGGGTGGTCAATGTCAAGAAGGTGTT...AATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp AAGAGAAGGGAGACTCACACTGAAGGCATTCTTGTCTCTTACCAGCTTCCACAGAACACCTTCTTGACATaGACCACCCCATACAGTGCT +
Preference number: 5 (lower is better)
Translates to: KRRETHTEGILVSYQLPQNTFLT*TTPYSA
Trigger: AGCACTGTATGGGGTGGTCAATGTCAAGAAGGTGTT...CTGTGGAAGCTGGTAAGAGACAAGAATGCCTTCAGTGTGAGTCTCCCTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548840.1
CDS-3UTR CAA 90 bp CGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTCTCTGTAACACCTTCTaGACATTGACCACCCCATAC +
Preference number: 5 (lower is better)
Translates to: RYLNLVGGNQHYWWSGFPLCNTF*TLTTPY
Trigger: GTATGGGGTGGTCAATGTCAAGAAGGTGTTACAGAG...AGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCATATTCCAAGTTTTCTaGGGCTGCGTATCGACAGGA +
Preference number: 5 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFIFQVF*GCVSTG
Trigger: TCCTGTCGATACGCAGCCCAAGAAAACTTGGAATAT...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTAGAGCAACATTGTCTTaGCAGCTGGGGAAGAGCACA +
Preference number: 5 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGRATLS*QLGKST
Trigger: TGTGCTCTTCCCCAGCTGCAAAGACAATGTTGCTCT...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS GCA 90 bp CGTGCTGGCCGATCAAGTACTCGCATTCTTTCACTGTCAGCTGCTTaGCTTTCCCAAAAGCATCTATGTAGATGTAGTCAAAGATGTCCA +
Preference number: 5 (lower is better)
Translates to: RAGRSSTRILSLSAA*LSQKHLCRCSQRCP
Trigger: TGGACATCTTTGACTACATCTACATAGATGCTTTTGGGAAAGGCAAGCAGCTGACAGTGAAAGAATGCGAGTACTTGATCGGCCAGCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS CCA 90 bp ACTGTAAATATTCTGCACCGTTTCATAGACAAACTCCAGATCTTCTaGATACCGGATCTCCAGCTCTGCGTTTGGGATGTAGTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: TVNILHRFIDKLQIF*IPDLQLCVWDVVSA
Trigger: GGCACTCACTACATCCCAAACGCAGAGCTGGAGATCCGGTATCCAGAAGATCTGGAGTTTGTCTATGAAACGGTGCAGAATATTTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp AAACTGTCACCACAGGACAAGCATACAAGCCATGCCACTGACACAGTGCCTTTCCTGAAAAGAACCTCTTaGAGAACGAGGCTACAATCT +
Preference number: 5 (lower is better)
Translates to: KLSPQDKHTSHATDTVPFLKRTS*RTRLQS
Trigger: AGATTGTAGCCTCGTTCTCAAAGAGGTTCTTTTCAG...GAAAGGCACTGTGTCAGTGGCATGGCTTGTATGCTTGTCCTGTGGTGACAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp TTGGAAAAGCAGATTCCAACACGCACATCTCCTTTCACACAAGTCCAACACTCTCACGATGCTGTCAATTaGGGCCTGGATGTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: LEKQIPTRTSPFTQVQHSHDAVN*GLDVFE
Trigger: CTCAAAGACATCCAGGCCCAAATTGACAGCATCGTG...AGAGTGTTGGACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACAGATGATTCACCTGCCTaGAAGGCCAAGCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTDDSPA*KAKLGW
Trigger: CCACCCCAGCTTGGCCTTCAAGGCAGGTGAATCATC...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp TATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTGGTCCAACTGCCGAGCAATaGTCAAATAGAGCAGAGACA +
Preference number: 5 (lower is better)
Translates to: YLNLVGGNQHYWWSGFPGPTAEQ*SNRAET
Trigger: TGTCTCTGCTCTATTTGACAATTGCTCGGCAGTTGG...ACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACACCTGGTCCGGGTACATaGCCAGATAGAGATCCAGCG +
Preference number: 5 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTPGPGT*PDRDPA
Trigger: CGCTGGATCTCTATCTGGCAATGTACCCGGACCAGG...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp CGGTATTTAAACTTAGTAGGAGGCAACCAGCACTACTGGTGGAGTGGCTTTCCTATATTCCAAGTTTTCTaGGGCTGCGTATCGACAGGA +
Preference number: 5 (lower is better)
Translates to: RYLNLVGGNQHYWWSGFPIFQVF*GCVSTG
Trigger: TCCTGTCGATACGCAGCCCAAGAAAACTTGGAATAT...AGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGTCTCCAGCTCTGCGTTaGGGATGTAGTGAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMSPALR*GCSECQ
Trigger: CTGGCACTCACTACATCCCAAACGCAGAGCTGGAGA...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCTCTCCAGCTCTGCGTTaGGGATGTAGTGAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLSPALR*GCSECQ
Trigger: CTGGCACTCACTACATCCCAAACGCAGAGCTGGAGA...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp AAAAGACACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAACGAAGAGCTGCATCTaGATCATCATGGACAGATAC +
Preference number: 5 (lower is better)
Translates to: KRHTVLTRDRTRSTEKSETKSCI*IIMDRY
Trigger: GTATCTGTCCATGATGATCAAGATGCAGCTCTTCGT...TTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS TCA 90 bp GGACTCCCAACTGCCGAGCAATTGTCAAATAGAGCAGAGACATGCTaGTTGGGATTCCTGTTCTGCGAATCAAAACCTGATGCATATATA +
Preference number: 5 (lower is better)
Translates to: GLPTAEQLSNRAETC*LGFLFCESKPDAYI
Trigger: TATATATGCATCAGGTTTTGATTCGCAGAACAGGAATCCCAATCAGCATGTCTCTGCTCTATTTGACAATTGCTCGGCAGTTGGGAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp CAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGAATACTGCATGCAGACTGAAAAGAACCTCTTaGAGAACGAGGCTACAATCT +
Preference number: 5 (lower is better)
Translates to: QRVNKQQAFNMGENTACRLKRTS*RTRLQS
Trigger: AGATTGTAGCCTCGTTCTCAAAGAGGTTCTTTTCAG...TCTGCATGCAGTATTCTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACAATGCCCCGAAGGGTTTaGCAAACAAGCTCCACGATG +
Preference number: 5 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTMPRRV*QTSSTM
Trigger: CATCGTGGAGCTTGTTTGCAAAACCCTTCGGGGCAT...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp AAGAACCTGGTTTTCTTTCAAAGCATGAGCAGTTCTCATTTTACAACATGTGTTGATGATTCACCTGCCTaGAAGGCCAAGCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: KNLVFFQSMSSSHFTTCVDDSPA*KAKLGW
Trigger: CCACCCCAGCTTGGCCTTCAAGGCAGGTGAATCATC...AACACATGTTGTAAAATGAGAACTGCTCATGCTTTGAAAGAAAACCAGGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CAA 90 bp ACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGGAAATTGCAAAACCTCATTTTTaGGTCTTTGAAGACCATGGA +
Preference number: 5 (lower is better)
Translates to: TQSSLGTEHVPQRNQKEIAKPHF*VFEDHG
Trigger: TCCATGGTCTTCAAAGACCAAAAAATGAGGTTTTGC...AATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACAACAAGATTAGCTCGCTaGAGAACTGGCAGGCCGAGA +
Preference number: 5 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTTRLAR*RTGRPR
Trigger: TCTCGGCCTGCCAGTTCTCAAGCGAGCTAATCTTGT...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp CAAAGGGTAAACAAGCAGCAGGCATTCAACATGGGTGAGAATACTGCATGCAGAGTCTGCTTTATAGGATaGCTGGGAGGATTACAAAGA +
Preference number: 5 (lower is better)
Translates to: QRVNKQQAFNMGENTACRVCFIG*LGGLQR
Trigger: TCTTTGTAATCCTCCCAGCAATCCTATAAAGCAGAC...TCTGCATGCAGTATTCTCACCCATGTTGAATGCCTGCTGCTTGTTTACCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CAA 90 bp ATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACAAGAGCAACATTGTCTTaGCAGCTGGGGAAGAGCACA +
Preference number: 5 (lower is better)
Translates to: ITISLLMSPSLRCCQDSTRATLS*QLGKST
Trigger: TGTGCTCTTCCCCAGCTGCAAAGACAATGTTGCTCT...TGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACAAGAGCAACATTGTCTTaGCAGCTGGGGAAGAGCACA +
Preference number: 5 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTRATLS*QLGKST
Trigger: TGTGCTCTTCCCCAGCTGCAAAGACAATGTTGCTCT...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp ACACAGTCCTCACTCGGGACCGAACACGTTCCACAGAGAAATCAGAAGGAAATTCAGAAAGTGCAATCTTaGCATGACAACCAGATAATT +
Preference number: 5 (lower is better)
Translates to: TQSSLGTEHVPQRNQKEIQKVQS*HDNQII
Trigger: AATTATCTGGTTGTCATGCAAAGATTGCACTTTCTG...AATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CAA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCCCCCTTGAACTTCAGTaGGTCGTAAAGGACATAGTT +
Preference number: 5 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLPLELQ*VVKDIV
Trigger: AACTATGTCCTTTACGACCAACTGAAGTTCAAGGGG...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACATTCACTGTCAGCTGCTaGCCTTTCCCAAAAGCATCT +
Preference number: 5 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTFTVSC*PFPKAS
Trigger: AGATGCTTTTGGGAAAGGCAAGCAGCTGACAGTGAA...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp TTGGAAAAGCAGATTCCAACACGCACATCTCCTTTCACACAAGTCCAACACTCTGCAAAACCTCATTTTTaGGTCTTTGAAGACCATGGA +
Preference number: 5 (lower is better)
Translates to: LEKQIPTRTSPFTQVQHSAKPHF*VFEDHG
Trigger: TCCATGGTCTTCAAAGACCAAAAAATGAGGTTTTGC...AGAGTGTTGGACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATACAAGATTAGCTCGCTaGAGAACTGGCAGGCCGAGA +
Preference number: 5 (lower is better)
Translates to: ILITISLLMSPSLRCCQDTRLAR*RTGRPR
Trigger: TCTCGGCCTGCCAGTTCTCAAGCGAGCTAATCTTGT...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp ATCAGAAGGAAATTATTGCAAATGCATAACCCCATCTGTCCAGCCAAGGAAATGCCAGAAAACCAACAATaGCAACTCTCAGCATGCTCA +
Preference number: 5 (lower is better)
Translates to: IRRKLLQMHNPICPAKEMPENQQ*QLSACS
Trigger: TGAGCATGCTGAGAGTTGCAATTGTTGGTTTTCTGG...CATTTCCTTGGCTGGACAGATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS CCA 90 bp CTGAAGCCATTACAAGGAACCTTAACAAATAATGCAGTTCACTACTaGGTAGAACCTGCAAAGCCAGAGAGAAGAACCACATTAATTTCG +
Preference number: 5 (lower is better)
Translates to: LKPLQGTLTNNAVHY*VEPAKPERRTTLIS
Trigger: CGAAATTAATGTGGTTCTTCTCTCTGGCTTTGCAGGTTCTACCCAGTAGTGAACTGCATTATTTGTTAAGGTTCCTTGTAATGGCTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549689.5
CDS-3UTR CAA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCATGTCGGAGAGAGGATaGCAGTACTGGTCAATATAT +
Preference number: 5 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLMSERG*QYWSIY
Trigger: ATATATTGACCAGTACTGCAATCCTCTCTCCGACAT...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp GCACACAACTTTACCTCTGAATATGCAACTAACTTCAGGGTAAAAAGACACACACCCCTTGAACTTCAGTaGGTCGTAAAGGACATAGTT +
Preference number: 5 (lower is better)
Translates to: AHNFTSEYATNFRVKRHTPLELQ*VVKDIV
Trigger: AACTATGTCCTTTACGACCAACTGAAGTTCAAGGGG...TGTGTGTCTTTTTACCCTGAAGTTAGTTGCATATTCAGAGGTAAAGTTGTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp TTGGAAAAGCAGATTCCAACACGCACATCTCCTTTCACACAAGTCCAACACTCTATCAGAAGGAAATTATaGCAAATGCATAACCCCATC +
Preference number: 5 (lower is better)
Translates to: LEKQIPTRTSPFTQVQHSIRRKL*QMHNPI
Trigger: GATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT...AGAGTGTTGGACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATTTCACTGTCAGCTGCTaGCCTTTCCCAAAAGCATCT +
Preference number: 5 (lower is better)
Translates to: ILITISLLMSPSLRCCQDFTVSC*PFPKAS
Trigger: AGATGCTTTTGGGAAAGGCAAGCAGCTGACAGTGAA...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS-3UTR CAA 90 bp TTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATAGCACACAACTTTACCTCATCAGAAGGAAATTATaGCAAATGCATAACCCCATC +
Preference number: 5 (lower is better)
Translates to: LLMSPSLRCCQDSTQLYLIRRKL*QMHNPI
Trigger: GATGGGGTTATGCATTTGCAATAATTTCCTTCTGAT...GAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS-3UTR CAA 90 bp AAGAACCTGGTTTTCTTTCAAAGCATGAGCAGTTCTCATTTTACAACATGTGTTGCCCTAATACAGTCATaGCTACGTGGCCATAATACA +
Preference number: 5 (lower is better)
Translates to: KNLVFFQSMSSSHFTTCVALIQS*LRGHNT
Trigger: TGTATTATGGCCACGTAGCAATGACTGTATTAGGGC...AACACATGTTGTAAAATGAGAACTGCTCATGCTTTGAAAGAAAACCAGGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS-3UTR CAA 90 bp ATTCTAATTACCATTAGCTTGTTAATGTCTCCATCTCTAAGATGCTGCCAAGATTCCCACATCCAAATTTaGCATTTTGTCCAGTTGATG +
Preference number: 5 (lower is better)
Translates to: ILITISLLMSPSLRCCQDSHIQI*HFVQLM
Trigger: CATCAACTGGACAAAATGCAAAATTTGGATGTGGGA...ATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622495.5
CDS GCA 72 bp CGCTGCTCTGGCACAGCTCGCGCAGCCGCCGGCAGGTaGTGGAGACACGGCCGATGTCGGCGGCCGTCAGCG +
Preference number: 6 (lower is better)
Translates to: RCSGTARAAAGR*WRHGRCRRPSA
Trigger: CGCTGACGGCCGCCGACATCGGCCGTGTCTCCAGCACCTGCCGGCGGCTGCGCGAGCTGTGCCAGAGCAGCG
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000551458.1
ENST00000622495.5
CDS CAA 90 bp GCGCAGCCGCAGCACAGGATGTACTCCAGCACCTCACCCGGCAGGTaGACGAGGCAGCTGAGGCCCGCTACCTCCGGCGCGGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: AQPQHRMYSSTSPGR*TRQLRPATSGAASS
Trigger: GGAGGAGGCCGCGCCGGAGGTAGCGGGCCTCAGCTGCCTCGTCAACCTGCCGGGTGAGGTGCTGGAGTACATCCTGTGCTGCGGCTGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427718.6
CDS CAA 90 bp AGCGAGCCGCAGCACAGGATGTACTCCAGCACCTCACCCGGCAGGTaGACGAGGCAGCTGAGGCCCGCTACCTCCGGCGCGGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SEPQHRMYSSTSPGR*TRQLRPATSGAASS
Trigger: GGAGGAGGCCGCGCCGGAGGTAGCGGGCCTCAGCTGCCTCGTCAACCTGCCGGGTGAGGTGCTGGAGTACATCCTGTGCTGCGGCTCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000551458.1
ENST00000622495.5
CDS GCA 72 bp ACCTCACCCGGAACTGCTCCTTCCACACCTTCCCGCTaGTCTGGCACAGCTCGCGCAGCCGCCGGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: TSPGTAPSTPSR*SGTARAAAGRC
Trigger: GCACCTGCCGGCGGCTGCGCGAGCTGTGCCAGAGCAGCGGGAAGGTGTGGAAGGAGCAGTTCCGGGTGAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000551458.1
ENST00000622495.5
CDS CAA 72 bp CAGCACAGGATGTACTCCAGCACCTCACCCGGCAGGTaGACGAGGCAGCTGAGGCCCGCTACCTCCGGCGCG +
Preference number: 6 (lower is better)
Translates to: QHRMYSSTSPGR*TRQLRPATSGA
Trigger: CGCGCCGGAGGTAGCGGGCCTCAGCTGCCTCGTCAACCTGCCGGGTGAGGTGCTGGAGTACATCCTGTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000551458.1
ENST00000622495.5
CDS GCA 72 bp ACCTCACCCGGAACTGCTCCTTCCACACCTTCCCGCTaGTCTGGCACAGCTCGCGCAGCCGCAGCACAGGAT +
Preference number: 6 (lower is better)
Translates to: TSPGTAPSTPSR*SGTARAAAAQD
Trigger: ATCCTGTGCTGCGGCTGCGCGAGCTGTGCCAGAGCAGCGGGAAGGTGTGGAAGGAGCAGTTCCGGGTGAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427718.6
CDS CCA 72 bp GCCCCGTGCTGCCCCGGGTCTAGGGTTTGGATGTGCTaGAGGATGTCAAGCACCTTCTCTGGCCAGATTCCC +
Preference number: 6 (lower is better)
Translates to: APCCPGSRVWMC*RMSSTFSGQIP
Trigger: GGGAATCTGGCCAGAGAAGGTGCTTGACATCCTCCAGCACATCCAAACCCTAGACCCGGGGCAGCACGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS GCA 72 bp ACCGCCCCGTGCTGCCCCGGGTCTAGGGTTTGGATGTaGTGGAGGATGTCAAGCACCTTCTCTGGCCAGATT +
Preference number: 6 (lower is better)
Translates to: TAPCCPGSRVWM*WRMSSTFSGQI
Trigger: AATCTGGCCAGAGAAGGTGCTTGACATCCTCCAGCACATCCAAACCCTAGACCCGGGGCAGCACGGGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS TCA 72 bp GCCCCTTCTGCGCCTTGGCACCACCTTAATAAGAAGTaGCTTGGGAAGTTGACAGGCTCCAGTGGGACTCCC +
Preference number: 6 (lower is better)
Translates to: APSAPWHHLNKK*LGKLTGSSGTP
Trigger: GGGAGTCCCACTGGAGCCTGTCAACTTCCCAAGTCACTTCTTATTAAGGTGGTGCCAAGGCGCAGAAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000622495.5
CDS TCA 72 bp CAGATAGAGATCCAGCGAGTCTCTCAGGAGCTGGTATaGCTGGTCGATGCCTTCCCCTTCTGCGCCTTGGCA +
Preference number: 6 (lower is better)
Translates to: QIEIQRVSQELV*LVDAFPFCALA
Trigger: TGCCAAGGCGCAGAAGGGGAAGGCATCGACCAGTCATACCAGCTCCTGAGAGACTCGCTGGATCTCTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550180.5
CDS CAA 72 bp CTTGGAGGAGGAGAAGCTGCACCTGGTCCGGGTACATaGCCAGATAGAGATCCAGCGAGTCTCTCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: LGGGEAAPGPGT*PDRDPASLSGA
Trigger: AGCTCCTGAGAGACTCGCTGGATCTCTATCTGGCAATGTACCCGGACCAGGTGCAGCTTCTCCTCCTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000548840.1
ENST00000550180.5
ENST00000622495.5
CDS CAA 90 bp AAAGCCTGGCTTGGAGGAGGAGAAGCTGCACCTGGTCCGGGTACATaGCCAGATAGAGATCCAGCGAGTCTCTCAGGAGCTGGTATGACT +
Preference number: 6 (lower is better)
Translates to: KAWLGGGEAAPGPGT*PDRDPASLSGAGMT
Trigger: AGTCATACCAGCTCCTGAGAGACTCGCTGGATCTCTATCTGGCAATGTACCCGGACCAGGTGCAGCTTCTCCTCCTCCAAGCCAGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000548840.1
ENST00000550180.5
ENST00000622495.5
CDS TCA 72 bp TCCCCTTCTGCGCCTTGGCACCACCTTAATAAGAAGTaGCTTGGGAAGTTGACAGGCTCCAGTGGGACTCCC +
Preference number: 6 (lower is better)
Translates to: SPSAPWHHLNKK*LGKLTGSSGTP
Trigger: GGGAGTCCCACTGGAGCCTGTCAACTTCCCAAGTCACTTCTTATTAAGGTGGTGCCAAGGCGCAGAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550180.5
CDS CCA 72 bp TCATGTTCCGGATCCACTCGTGTCCCATCATGCAGGTaGGGTCCCAGCCGTAGATCACACAGTTATAGCCAT +
Preference number: 6 (lower is better)
Translates to: SCSGSTRVPSCR*GPSRRSHSYSH
Trigger: ATGGCTATAACTGTGTGATCTACGGCTGGGACCCCACCTGCATGATGGGACACGAGTGGATCCGGAACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000547806.1
ENST00000548840.1
ENST00000550180.5
ENST00000622495.5
CDS CAA 72 bp AAGCTGGGGTGGCGACTGTTTATGCCCCGAAGGGTTTaGCAAACAAGCTCCACGATGCTGTCAATTTGGGCC +
Preference number: 6 (lower is better)
Translates to: KLGWRLFMPRRV*QTSSTMLSIWA
Trigger: GGCCCAAATTGACAGCATCGTGGAGCTTGTTTGCAAAACCCTTCGGGGCATAAACAGTCGCCACCCCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS CAA 90 bp TTGAAGGCCAAGCTGGGGTGGCGACTGTTTATGCCCCGAAGGGTTTaGCAAACAAGCTCCACGATGCTGTCAATTTGGGCCTGGATGTCT +
Preference number: 6 (lower is better)
Translates to: LKAKLGWRLFMPRRV*QTSSTMLSIWAWMS
Trigger: AGACATCCAGGCCCAAATTGACAGCATCGTGGAGCTTGTTTGCAAAACCCTTCGGGGCATAAACAGTCGCCACCCCAGCTTGGCCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS CCA 72 bp ACATTGACCACCCCATACAGTGCTGCAGTCACGTGCTaGCCGATCAAGTACTCGCATTCTTTCACTGTCAGC +
Preference number: 6 (lower is better)
Translates to: TLTTPYSAAVTC*PIKYSHSFTVS
Trigger: GCTGACAGTGAAAGAATGCGAGTACTTGATCGGCCAGCACGTGACTGCAGCACTGTATGGGGTGGTCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000548840.1
ENST00000622495.5
CDS CAA 72 bp AGCTCCACGATGCTGTCAATTTGGGCCTGGATGTCTTaGAGGCTGATGTCGGAGAGAGGATTGCAGTACTGG +
Preference number: 6 (lower is better)
Translates to: SSTMLSIWAWMS*RLMSERGLQYW
Trigger: CCAGTACTGCAATCCTCTCTCCGACATCAGCCTCAAAGACATCCAGGCCCAAATTGACAGCATCGTGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS CAA 90 bp AGGCTTAACAGGTTTCCCACCATTCTCTGTAACACCTTCTTGACATaGACCACCCCATACAGTGCTGCAGTCACGTGCTGGCCGATCAAG +
Preference number: 6 (lower is better)
Translates to: RLNRFPTILCNTFLT*TTPYSAAVTCWPIK
Trigger: CTTGATCGGCCAGCACGTGACTGCAGCACTGTATGGGGTGGTCAATGTCAAGAAGGTGTTACAGAGAATGGTGGGAAACCTGTTAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000548840.1
ENST00000622495.5
CDS GCA 72 bp TTGACATTGACCACCCCATACAGTGCTGCAGTCACGTaGTGGCCGATCAAGTACTCGCATTCTTTCACTGTC +
Preference number: 6 (lower is better)
Translates to: LTLTTPYSAAVT*WPIKYSHSFTV
Trigger: GACAGTGAAAGAATGCGAGTACTTGATCGGCCAGCACGTGACTGCAGCACTGTATGGGGTGGTCAATGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000548840.1
ENST00000622495.5
CDS CAA 72 bp AGGTTTCCCACCATTCTCTGTAACACCTTCTTGACATaGACCACCCCATACAGTGCTGCAGTCACGTGCTGG +
Preference number: 6 (lower is better)
Translates to: RFPTILCNTFLT*TTPYSAAVTCW
Trigger: CCAGCACGTGACTGCAGCACTGTATGGGGTGGTCAATGTCAAGAAGGTGTTACAGAGAATGGTGGGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000548840.1
ENST00000622495.5
CDS CCA 72 bp TTGCAAACAAGCTCCACGATGCTGTCAATTTGGGCCTaGATGTCTTTGAGGCTGATGTCGGAGAGAGGATTG +
Preference number: 6 (lower is better)
Translates to: LQTSSTMLSIWA*MSLRLMSERGL
Trigger: CAATCCTCTCTCCGACATCAGCCTCAAAGACATCCAGGCCCAAATTGACAGCATCGTGGAGCTTGTTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS CCA 72 bp AGGGTTTTGCAAACAAGCTCCACGATGCTGTCAATTTaGGCCTGGATGTCTTTGAGGCTGATGTCGGAGAGA +
Preference number: 6 (lower is better)
Translates to: RVLQTSSTMLSI*AWMSLRLMSER
Trigger: TCTCTCCGACATCAGCCTCAAAGACATCCAGGCCCAAATTGACAGCATCGTGGAGCTTGTTTGCAAAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS CAA 72 bp CACTACTGGGTAGAACGTGCTCTGAAAAGAACCTCTTaGAGAACGAGGCTACAATCTTCCGCGCTTCTAACC +
Preference number: 6 (lower is better)
Translates to: HYWVERALKRTS*RTRLQSSALLT
Trigger: GGTTAGAAGCGCGGAAGATTGTAGCCTCGTTCTCAAAGAGGTTCTTTTCAGAGCACGTTCTACCCAGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551458.1
CDS CAA 90 bp TTGCAAACAAGCTCCACGATGCTGTCAATTTGGGCCTGGATGTCTTaGAGGCTGATGTCGGAGAGAGGATTGCAGTACTGGTCAATATAT +
Preference number: 6 (lower is better)
Translates to: LQTSSTMLSIWAWMS*RLMSERGLQYWSIY
Trigger: ATATATTGACCAGTACTGCAATCCTCTCTCCGACATCAGCCTCAAAGACATCCAGGCCCAAATTGACAGCATCGTGGAGCTTGTTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS CAA 90 bp GTTGAGGGCATTATAGTAATCCATTCGATTCCCCTTGAACTTCAGTaGGTCGTAAAGGACATAGTTCATGGCATCCAGCACCTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: VEGIIVIHSIPLELQ*VVKDIVHGIQHLAL
Trigger: CAGAGCCAGGTGCTGGATGCCATGAACTATGTCCTTTACGACCAACTGAAGTTCAAGGGGAATCGAATGGATTACTATAATGCCCTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS CCA 72 bp ATTCTGCACCGTTTCATAGACAAACTCCAGATCTTCTaGATACCGGATCTCCAGCTCTGCGTTTGGGATGTA +
Preference number: 6 (lower is better)
Translates to: ILHRFIDKLQIF*IPDLQLCVWDV
Trigger: TACATCCCAAACGCAGAGCTGGAGATCCGGTATCCAGAAGATCTGGAGTTTGTCTATGAAACGGTGCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS CAA 72 bp AGCCATTACAAGGAACGTGCTCTGAAAAGAACCTCTTaGAGAACGAGGCTACAATCTTCCGCGCTTCTAACC +
Preference number: 6 (lower is better)
Translates to: SHYKERALKRTS*RTRLQSSALLT
Trigger: GGTTAGAAGCGCGGAAGATTGTAGCCTCGTTCTCAAAGAGGTTCTTTTCAGAGCACGTTCCTTGTAATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000550180.5
ENST00000622495.5
CDS CAA 72 bp GCCTGGATGTCTTTGAGGCTGATGTCGGAGAGAGGATaGCAGTACTGGTCAATATATACAGCACCTTCAAGA +
Preference number: 6 (lower is better)
Translates to: AWMSLRLMSERG*QYWSIYTAPSR
Trigger: TCTTGAAGGTGCTGTATATATTGACCAGTACTGCAATCCTCTCTCCGACATCAGCCTCAAAGACATCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS CAA 90 bp TCAATTTGGGCCTGGATGTCTTTGAGGCTGATGTCGGAGAGAGGATaGCAGTACTGGTCAATATATACAGCACCTTCAAGATACGACTCA +
Preference number: 6 (lower is better)
Translates to: SIWAWMSLRLMSERG*QYWSIYTAPSRYDS
Trigger: TGAGTCGTATCTTGAAGGTGCTGTATATATTGACCAGTACTGCAATCCTCTCTCCGACATCAGCCTCAAAGACATCCAGGCCCAAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS CCA 72 bp TCTTTGAGGCTGATGTCGGAGAGAGGATTGCAGTACTaGTCAATATATACAGCACCTTCAAGATACGACTCA +
Preference number: 6 (lower is better)
Translates to: SLRLMSERGLQY*SIYTAPSRYDS
Trigger: TGAGTCGTATCTTGAAGGTGCTGTATATATTGACCAGTACTGCAATCCTCTCTCCGACATCAGCCTCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS CCA 72 bp CCGAGCAATTGTCAAATAGAGCAGAGACATGCTGATTaGGATTCCTGTTCTGCGAATCAAAACCTGATGCAT +
Preference number: 6 (lower is better)
Translates to: PSNCQIEQRHAD*DSCSANQNLMH
Trigger: ATGCATCAGGTTTTGATTCGCAGAACAGGAATCCCAATCAGCATGTCTCTGCTCTATTTGACAATTGCTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330622.9
ENST00000427718.6
ENST00000549689.5
ENST00000550180.5
ENST00000622495.5
CDS CCA 72 bp TTACAAGGAACCTTAACAAATAATGCAGTTCACTACTaGGTAGAACCTGCAAAGCCAGAGAGAAGAACCACA +
Preference number: 6 (lower is better)
Translates to: LQGTLTNNAVHY*VEPAKPERRTT
Trigger: TGTGGTTCTTCTCTCTGGCTTTGCAGGTTCTACCCAGTAGTGAACTGCATTATTTGTTAAGGTTCCTTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549689.5