RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO17 (Homo sapiens)

Ensembl gene IDs: ENSG00000269190

Ensembl transcript IDs: ENST00000292852.9, ENST00000595329.5, ENST00000596025.5, ENST00000599598.1, ENST00000601394.1, ENST00000634720.1, ENST00000634917.1, ENST00000634982.2, ENST00000635016.1, ENST00000635115.1

Found 518 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTaGCAGGCAGCAGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCT +
Preference number: 1 (lower is better)
Translates to: PGAGRRSRSSLERPT*QAAVSLYAPVTQPA
Trigger: AGCTGGCTGGGTGACGGGGGCATAGAGGCTGACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR GCA 90 bp GCGGGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCTaGTCTGGGGCAGGGTGCCGCTCCTCACTCACCAGTCAGCCACAC +
Preference number: 1 (lower is better)
Translates to: AGNEPLLQSRCQACC*SGAGCRSSLTSQPH
Trigger: GTGTGGCTGACTGGTGAGTGAGGAGCGGCACCCTGCCCCAGAGCAGCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR CCA 90 bp AGCCTCAGCTCACAGGGCACCATGCTCCCACCCCTTCAGAGACCCTaGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGG +
Preference number: 1 (lower is better)
Translates to: SLSSQGTMLPPLQRP*ASTRWSGEVSRFRG
Trigger: CCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTCTGAAGGGGTGGGAGCATGGTGCCCTGTGAGCTGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR CCA 90 bp GTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCTGAGGGCTaGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACATTTGG +
Preference number: 1 (lower is better)
Translates to: VTQPALWVSGREAEG*LHLDEGPAHLDHIW
Trigger: CCAAATGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR CCA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTaGACCACATTTGGAGACGTCCTGGCCTGGGAACCTCTAGGGGAG +
Preference number: 1 (lower is better)
Translates to: GRLRAGSILMKVLHI*TTFGDVLAWEPLGE
Trigger: CTCCCCTAGAGGTTCCCAGGCCAGGACGTCTCCAAATGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR CCA 90 bp GGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACATTTaGAGACGTCCTGGCCTGGGAACCTCTAGGGGAGGAGCCTTGGTG +
Preference number: 1 (lower is better)
Translates to: GWLHLDEGPAHLDHI*RRPGLGTSRGGALV
Trigger: CACCAAGGCTCCTCCCCTAGAGGTTCCCAGGCCAGGACGTCTCCAAATGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR TCA 90 bp TTGGTGAAGACGTGGGAGACCTGTCGGCAGCCCCTCTCAGTCCACTaGAGGACCGGGTCAGGTGAGGCTGAGAACTTGACCACTTCCTTT +
Preference number: 1 (lower is better)
Translates to: LVKTWETCRQPLSVH*RTGSGEAENLTTSF
Trigger: AAAGGAAGTGGTCAAGTTCTCAGCCTCACCTGACCCGGTCCTTCAGTGGACTGAGAGGGGCTGCCGACAGGTCTCCCACGTCTTCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
3UTR GCA 90 bp TCAGCGGACCTCTGCTCCCTGCCCACGATCATTACCCCCAAAACATaGCGGCAAGTCTCTGCTCCCTGCGTCGGCAGAGGGATTTATAAG +
Preference number: 1 (lower is better)
Translates to: SADLCSLPTIITPKT*RQVSAPCVGRGIYK
Trigger: CTTATAAATCCCTCTGCCGACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGGGAGCAGAGGTCCGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR TCA 90 bp CCCTCTCAGTCCACTGAAGGACCGGGTCAGGTGAGGCTGAGAACTTaGCCACTTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCT +
Preference number: 1 (lower is better)
Translates to: PSQSTEGPGQVRLRT*PLPFHTHPEGGPGA
Trigger: AGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCACCTGACCCGGTCCTTCAGTGGACTGAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
3UTR CCA 90 bp GCTCTAGCAGACCTGAAGATGCATGATGGGCTATACATCTCTCCTTaGCCTCTTGGAGTCCCTTTGCCATTCTCCACCCTGCTGCGGGCT +
Preference number: 1 (lower is better)
Translates to: ALADLKMHDGLYISP*PLGVPLPFSTLLRA
Trigger: AGCCCGCAGCAGGGTGGAGAATGGCAAAGGGACTCCAAGAGGCCAAGGAGAGATGTATAGCCCATCATGCATCTTCAGGTCTGCTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR GCA 90 bp GATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTaGCTCAGCGGACCTCTGCTCCCTGCCCACGATCATTACCCCCAA +
Preference number: 1 (lower is better)
Translates to: DFPKQQMTLLVSRTD*LSGPLLPAHDHYPQ
Trigger: TTGGGGGTAATGATCGTGGGCAGGGAGCAGAGGTCCGCTGAGGCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR CCA 90 bp CAGGTGTTCCTCGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTaGGGGTCATGGCCATCACAAACATGTCACAGTGCTGCAGATATT +
Preference number: 1 (lower is better)
Translates to: QVFLALVPVNPQPSG*GSWPSQTCHSAADI
Trigger: AATATCTGCAGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCGAGGAACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR GCA 90 bp CCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTaGGTCGGCAGAGGGATTTATAAGCCCTCTCTTATAAATCCTGGT +
Preference number: 1 (lower is better)
Translates to: PTIITPKTCRQVSAP*VGRGIYKPSLINPG
Trigger: ACCAGGATTTATAAGAGAGGGCTTATAAATCCCTCTGCCGACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR TCA 90 bp AGGGCTCGATACTTCTTAGCTGTTATGATTATAGATATCCAGGAGTaGCAGAAGGGAAACCGAGCAGACGAGAGGCTGGGCGTGTGTGCC +
Preference number: 1 (lower is better)
Translates to: RARYFLAVMIIDIQE*QKGNRADERLGVCA
Trigger: GGCACACACGCCCAGCCTCTCGTCTGCTCGGTTTCCCTTCTGTCACTCCTGGATATCTATAATCATAACAGCTAAGAAGTATCGAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
3UTR CCA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTaGCTAGTTATCTGCAGCAGGAACATGTCGTTAAGGCACAGATCA +
Preference number: 1 (lower is better)
Translates to: FLQEIKGWAEIKGWV*LVICSRNMSLRHRS
Trigger: TGATCTGTGCCTTAACGACATGTTCCTGCTGCAGATAACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR GCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCCGCTGCCAAGCCTGCTaGTGCTCTGGGGCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVRCQAC*CSGAGC
Trigger: GCACCCTGCCCCAGAGCAGCAGCAGGCTTGGCAGCG...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR TCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGACCCAGCCTGCTGGGATaGGGGTGGGCAGGAGTGCAG +
Preference number: 2 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGPSLLG*GWAGVQ
Trigger: CTGCACTCCTGCCCACCCTCATCCCAGCAGGCTGGG...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCTGCCATTCTCCACCCTaGTGCGGGCTCCAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGCHSPP*CGLQAA
Trigger: AGCTGCCTGGAGCCCGCAGCAGGGTGGAGAATGGCA...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR TCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCACAAAGGGTGCACAGTaGCAGCCGCTACCCGTGGGG +
Preference number: 2 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVTKGAQ*QPLPVG
Trigger: CCCCACGGGTAGCGGCTGTCACTGTGCACCCTTTGT...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR TCA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCCCCAACTATGCTCCCTaGGCCTCAGCTCACAGGGCA +
Preference number: 2 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGPNYAP*ASAHRA
Trigger: TGCCCTGTGAGCTGAGGCTCAGGGAGCATAGTTGGG...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCTGCCATTCTCCACCCTaGTGCGGGCTCCAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVCHSPP*CGLQAA
Trigger: AGCTGCCTGGAGCCCGCAGCAGGGTGGAGAATGGCA...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCTGCTCTGGGGCAGGGTaGCGCTCCTCACTCACCAGT +
Preference number: 2 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVCSGAG*RSSLTS
Trigger: ACTGGTGAGTGAGGAGCGGCACCCTGCCCCAGAGCA...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR TCA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCCACATACTAGACATGTaGGCGGGGAGCTCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGHILDM*AGSSVA
Trigger: GGCCACAGAGCTCCCCGCTCACATGTCTAGTATGTG...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR TCA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCGGGTGGTCCTGCGGTTaGTTCTGGAGGCTTTTGGGT +
Preference number: 2 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGGWSCG*FWRLLG
Trigger: ACCCAAAAGCCTCCAGAATCAACCGCAGGACCACCC...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTAGCCGCTGCCAAGCCTaGTGCTGCTCTGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGSRCQA*CCSGAG
Trigger: CCCTGCCCCAGAGCAGCAGCAGGCTTGGCAGCGGCT...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGACTGTTGCAGAGCCGCTaGCAAGCCTGCTGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGLLQSR*QACCCS
Trigger: AGAGCAGCAGCAGGCTTGGCAGCGGCTCTGCAACAG...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCTACCTTCCCCGGCTCTaGATCACTTCCCCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVYLPRL*ITSPLS
Trigger: GCTGAGAGGGGAAGTGATGCAGAGCCGGGGAAGGTA...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR TCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGACACATACTAGACATGTaGGCGGGGAGCTCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGHILDM*AGSSVA
Trigger: GGCCACAGAGCTCCCCGCTCACATGTCTAGTATGTG...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCCTCTTGGAGTCCCTTTaGCATTCTCCACCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVLLESL*HSPPCC
Trigger: GCAGCAGGGTGGAGAATGGCAAAGGGACTCCAAGAG...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCACCAGGTCCACAAGCTaGCTCTTGGAGCACCATCTG +
Preference number: 2 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVTRSTS*LLEHHL
Trigger: CAGATGGTGCTCCAAGAGGCAGCTTGTGGACCTGGT...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CCA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACAGTGGAGCCAGAGCCCTaGGGTGGAGCCAGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTVEPEP*GGARAW
Trigger: CCAGGCTCTGGCTCCACCCCAGGGCTCTGGCTCCAC...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR TCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCACAAAGGGTGCACAGTaGCAGCCGCTACCCGTGGGG +
Preference number: 2 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTTKGAQ*QPLPVG
Trigger: CCCCACGGGTAGCGGCTGTCACTGTGCACCCTTTGT...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCTGGAATAGAACAAAGTaGCAGGAACCGGCTGAGCGC +
Preference number: 2 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVWNRTK*QEPAER
Trigger: GCGCTCAGCCGGTTCCTGGCACTTTGTTCTATTCCA...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCCATTCTCCACCCTGCTaGGGGCTCCAGGCAGCTGAC +
Preference number: 2 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTHSPPC*GLQAAD
Trigger: GTCAGCTGCCTGGAGCCCGCAGCAGGGTGGAGAATG...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCGCAGCCCTCAGGGTTTaGTCTAGCAGACCTGAAGAT +
Preference number: 2 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVAALRV*SSRPED
Trigger: ATCTTCAGGTCTGCTAGAGCAAACCCTGAGGGCTGC...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGACCTCATCACAAAGGGTaGACAGTGACAGCCGCTACC +
Preference number: 2 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGPHHKG*TVTAAT
Trigger: GGTAGCGGCTGTCACTGTGCACCCTTTGTGATGAGG...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGATGGAATAGAACAAAGTaGCAGGAACCGGCTGAGCGC +
Preference number: 2 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGWNRTK*QEPAER
Trigger: GCGCTCAGCCGGTTCCTGGCACTTTGTTCTATTCCA...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTCTGTTGCAGAGCCGCTaGCAAGCCTGCTGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGLLQSR*QACCCS
Trigger: AGAGCAGCAGCAGGCTTGGCAGCGGCTCTGCAACAG...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGACGGGAAAGGATGCTCTaGGGAAGAACCACAATGCAG +
Preference number: 2 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGRERML*GRTTMQ
Trigger: CTGCATTGTGGTTCTTCCCCAGAGCATCCTTTCCCG...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCTACCTTCCCCGGCTCTaGATCACTTCCCCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTYLPRL*ITSPLS
Trigger: GCTGAGAGGGGAAGTGATGCAGAGCCGGGGAAGGTA...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CCA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGCTGACACTCCCCTTCTaGGGGGCTGAGGAAGCTGTG +
Preference number: 2 (lower is better)
Translates to: RVWSGKSGVSRPSELRALLTLPF*GAEEAV
Trigger: CACAGCTTCCTCAGCCCCCCAGAAGGGGAGTGTCAG...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGTCATGGAAGGTGTGCTaGGAACCAGCCACCTGGGAG +
Preference number: 2 (lower is better)
Translates to: RVWSGKSGVSRPSELRALSWKVC*EPATWE
Trigger: CTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGA...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR GCA 90 bp GTTGATGGGGCGGGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCTCCTTCTCAAGGGACTaGCTTGTCCCCCAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: VDGAGNEPLLQSRCQACCSFSRD*LVPQGK
Trigger: TTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGA...GCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCCCGCCCCATCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTACCAGGTCCACAAGCTaGCTCTTGGAGCACCATCTG +
Preference number: 2 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGTRSTS*LLEHHL
Trigger: CAGATGGTGCTCCAAGAGGCAGCTTGTGGACCTGGT...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCCCTCATCACAAAGGGTaGACAGTGACAGCCGCTACC +
Preference number: 2 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTPHHKG*TVTAAT
Trigger: GGTAGCGGCTGTCACTGTGCACCCTTTGTGATGAGG...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CCA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTGGCCTCCTGAAGTGCTaGGATTCCACAGGTGTGAGC +
Preference number: 2 (lower is better)
Translates to: PAHDHYPQNMPASLCSLRGLLKC*DSTGVS
Trigger: GCTCACACCTGTGGAATCCCAGCACTTCAGGAGGCC...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CCA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTGCAGCCTCAACCTCCTaGTCTCAGGCAATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: PAHDHYPQNMPASLCSLRAASTS*SQAILP
Trigger: TGGGAGGATTGCCTGAGACCAGGAGGTTGAGGCTGC...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCTGTTGGATCAGCCAATaGGATGCTCCGGCAGGGGAT +
Preference number: 2 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTCWISQ*DAPAGD
Trigger: ATCCCCTGCCGGAGCATCCCATTGGCTGATCCAACA...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGACTATACATCTCTCCTTaGCCTCTTGGAGTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGLYISP*PLGVPL
Trigger: CAAAGGGACTCCAAGAGGCCAAGGAGAGATGTATAG...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCCCACAAGCTGCCTCTTaGAGCACCATCTGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTPQAAS*STIWEG
Trigger: TCCTTCCCAGATGGTGCTCCAAGAGGCAGCTTGTGG...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR TCA 90 bp CTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCCTGCAAGGCTGGTCTTaGCTGACAACGTCAGGCAGT +
Preference number: 2 (lower is better)
Translates to: LPTIITPKTCRQVSAPCVLQGWS*LTTSGS
Trigger: ACTGCCTGACGTTGTCAGTCAAGACCAGCCTTGCAG...GACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCGGACATGACTACAAATaGAGGCCACATACTAGACAT +
Preference number: 2 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVGHDYK*RPHTRH
Trigger: ATGTCTAGTATGTGGCCTTCATTTGTAGTCATGTCC...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCCTCTCCTTGGCCTCTTaGAGTCCCTTTGCCATTCTC +
Preference number: 2 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTLSLAS*SPFAIL
Trigger: GAGAATGGCAAAGGGACTCCAAGAGGCCAAGGAGAG...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CCA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACATCTTGGAGCACCATCTaGGAAGGAGAGATGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTSWSTI*EGEMAG
Trigger: CCCTGCCATCTCTCCTTCCCAGATGGTGCTCCAAGA...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAAGACCAGATTTTCTATaGAAGAGCCACAGCCTGAAG +
Preference number: 2 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGRPDFL*KSHSLK
Trigger: CTTCAGGCTGTGGCTCTTCCATAGAAAATCTGGTCT...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR TCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCACCTCTATGAAAGCCTaGCCCTCATCTTTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTTSMKA*PSSLWD
Trigger: GTCCCACAAAGATGAGGGTCAGGCTTTCATAGAGGT...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR TCA 90 bp CCCGTACTGCTCAAAAGATACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACCCCCTCTCAGTCCACTaGAGGACCGGGTCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: PVLLKRYVADALAKVGEDPLSVH*RTGSGE
Trigger: CTCACCTGACCCGGTCCTTCAGTGGACTGAGAGGGG...GTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTATCTTTTGAGCAGTACGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
3UTR-3UTR GCA 90 bp CGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACACAAGTCTCTGCTCCCTaGGTCGGCAGAGGGATTTAT +
Preference number: 2 (lower is better)
Translates to: RPRSSKPTTFRVGVMAITQVSAP*VGRGIY
Trigger: ATAAATCCCTCTGCCGACGCAGGGAGCAGAGACTTG...TGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR GCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGCCTCAGCGGACCTCTaGTCCCTGCCCACGATCATT +
Preference number: 2 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSAASADL*SLPTII
Trigger: AATGATCGTGGGCAGGGAGCAGAGGTCCGCTGAGGC...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR GCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTTCCTTCTCAAGGGACTaGCTTGTCCCCCAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGSFSRD*LVPQGK
Trigger: TTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGA...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCGTCTCTGTCACCCATTaGTTCCTGTTGGATCAGCCA +
Preference number: 2 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTVSVTH*FLLDQP
Trigger: TGGCTGATCCAACAGGAAGCAATGGGTGACAGAGAC...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CCA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCTTTCTCACCCAGGCTaGAGTGGTGGTGAAATCACG +
Preference number: 2 (lower is better)
Translates to: PAHDHYPQNMPASLCSLRLSHPG*SGGEIT
Trigger: CGTGATTTCACCACCACTCCAGCCTGGGTGAGAAAG...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CCA 90 bp CGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAGTTTATGGCCAGATTTaGGGGCCTGTTCCCAACACC +
Preference number: 2 (lower is better)
Translates to: RPRSSKPTTFRVGVMAITVYGQI*GPVPNT
Trigger: GGTGTTGGGAACAGGCCCCCAAATCTGGCCATAAAC...TGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTAGGCTGGAGTGGTGGTaGAATCACGGCTCACTGCAG +
Preference number: 2 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSARLEWW*NHGSLQ
Trigger: CTGCAGTGAGCCGTGATTTCACCACCACTCCAGCCT...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCCTTTGTTTTGTGACTaGGTCCACCGAGATCCTTGC +
Preference number: 2 (lower is better)
Translates to: PAHDHYPQNMPASLCSLRPLFCD*VHRDPC
Trigger: GCAAGGATCTCGGTGGACTCAGTCACAAAACAAAGG...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGGCCTCCTGAAGTGCTaGGATTCCACAGGTGTGAGC +
Preference number: 2 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSAGLLKC*DSTGVS
Trigger: GCTCACACCTGTGGAATCCCAGCACTTCAGGAGGCC...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGGGCTGAGGAAGCTGTaGACAGCCTGGTTTGTCACA +
Preference number: 2 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSAGLRKL*TAWFVT
Trigger: TGTGACAAACCAGGCTGTTCACAGCTTCCTCAGCCC...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR GCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGAAATCACGGCTCACTaGAGCCTCAACCTCCTGGTC +
Preference number: 2 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSAEITAH*SLNLLV
Trigger: GACCAGGAGGTTGAGGCTGCAGTGAGCCGTGATTTC...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CCA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTAGCGGTTTTCCGCCCTaGGTGGGCCAGGTGTTCCTC +
Preference number: 2 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFSGFPP*VGQVFL
Trigger: GAGGAACACCTGGCCCACCCAGGGCGGAAAACCGCT...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CCA 90 bp CAGGCAGCTGACCTCTATGAAAGCCTGACCCTCATCTTTGTGGGACAGGACATGTGTTGGATCAGCCAATaGGATGCTCCGGCAGGGGAT +
Preference number: 2 (lower is better)
Translates to: QAADLYESLTLIFVGQDMCWISQ*DAPAGD
Trigger: ATCCCCTGCCGGAGCATCCCATTGGCTGATCCAACA...CATGTCCTGTCCCACAAAGATGAGGGTCAGGCTTTCATAGAGGTCAGCTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR TCA 90 bp ACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGACACTCCCGAGCTCCAGTaGTCCTCCCACCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: TAFRAESLEQRFTHIFIDTPELQ*SSHLGL
Trigger: GAGGCCGAGGTGGGAGGATCACTGGAGCTCGGGAGT...GTCAATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp CCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGCAGATATTGGGCTGAGGAAGCTGTaGACAGCCTGGTTTGTCACA +
Preference number: 2 (lower is better)
Translates to: PSGWGSWPSQTCHSAADIGLRKL*TAWFVT
Trigger: TGTGACAAACCAGGCTGTTCACAGCTTCCTCAGCCC...AATATCTGCAGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR GCA 90 bp ACCAGAGATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTGCATGCCGGCAAGTCTCTaGTCCCTGCGTCGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: TRDFPKQQMTLLVSRTDCMPASL*SLRRQR
Trigger: CCTCTGCCGACGCAGGGAGCAGAGACTTGCCGGCAT...GCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CCA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTCTGACACTCCCCTTCTaGGGGGCTGAGGAAGCTGTG +
Preference number: 2 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFLTLPF*GAEEAV
Trigger: CACAGCTTCCTCAGCCCCCCAGAAGGGGAGTGTCAG...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp CCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGCAGATATTAAGGCTGGTCTTGACTaGCAACGTCAGGCAGTAGTC +
Preference number: 2 (lower is better)
Translates to: PSGWGSWPSQTCHSAADIKAGLD*QRQAVV
Trigger: GACTACTGCCTGACGTTGTCAGTCAAGACCAGCCTT...AATATCTGCAGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTCCTTTGTTTTGTGACTaGGTCCACCGAGATCCTTGC +
Preference number: 2 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSAPLFCD*VHRDPC
Trigger: GCAAGGATCTCGGTGGACTCAGTCACAAAACAAAGG...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR GCA 90 bp ACCAGAGATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTGCCGGACCTCTGCTCCCTaGCCACGATCATTACCCCCA +
Preference number: 2 (lower is better)
Translates to: TRDFPKQQMTLLVSRTDCRTSAP*PRSLPP
Trigger: TGGGGGTAATGATCGTGGGCAGGGAGCAGAGGTCCG...GCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR GCA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTGTCTCAAGGACAGACTaGCTCAGCGGACCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFVSRTD*LSGPLL
Trigger: GAGCAGAGGTCCGCTGAGGCAGTCTGTCCTTGAGAC...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CCA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTGAGCCCTACTGTCCCTaGGTATCCTCTGGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFEPYCP*VSSGFW
Trigger: CCAGAAGCCAGAGGATACCCAGGGACAGTAGGGCTC...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTCCCACCCAAGCCTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 2 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVPTQAS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAGGCTTGGGTGGG...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTTTAGCCTTTGTTTTGTaGCTGAGTCCACCGAGATCC +
Preference number: 2 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSALAFVL*LSPPRS
Trigger: GGATCTCGGTGGACTCAGTCACAAAACAAAGGCTAA...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGTACCCACATATTTATTaGCAGCAAGCCAGTGATAAG +
Preference number: 2 (lower is better)
Translates to: RVWSGKSGVSRPSELRALYPHIY*QQASDK
Trigger: CTTATCACTGGCTTGCTGTCAATAAATATGTGGGTA...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp GACCTGAAGATGCATGATGGGCTATACATCTCTCCTTGGCCTCTTGGAGTCCCTACCTCTATGAAAGCCTaGCCCTCATCTTTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: DLKMHDGLYISPWPLGVPTSMKA*PSSLWD
Trigger: GTCCCACAAAGATGAGGGTCAGGCTTTCATAGAGGT...AGGGACTCCAAGAGGCCAAGGAGAGATGTATAGCCCATCATGCATCTTCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR GCA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTATGCCGGCAAGTCTCTaGTCCCTGCGTCGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVMPASL*SLRRQR
Trigger: CCTCTGCCGACGCAGGGAGCAGAGACTTGCCGGCAT...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR GCA 90 bp ACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGACCGGACCTCTGCTCCCTaGCCACGATCATTACCCCCA +
Preference number: 2 (lower is better)
Translates to: TAFRAESLEQRFTHIFIDRTSAP*PRSLPP
Trigger: TGGGGGTAATGATCGTGGGCAGGGAGCAGAGGTCCG...GTCAATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CCA 90 bp ACCAGAGATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTGCGAGCCCTACTGTCCCTaGGTATCCTCTGGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: TRDFPKQQMTLLVSRTDCEPYCP*VSSGFW
Trigger: CCAGAAGCCAGAGGATACCCAGGGACAGTAGGGCTC...GCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTAAGGCTGGTCTTGACTaGCAACGTCAGGCAGTAGTC +
Preference number: 2 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFKAGLD*QRQAVV
Trigger: GACTACTGCCTGACGTTGTCAGTCAAGACCAGCCTT...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp ACCAGAGATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTGCCTGCAAGGCTGGTCTTaGCTGACAACGTCAGGCAGT +
Preference number: 2 (lower is better)
Translates to: TRDFPKQQMTLLVSRTDCLQGWS*LTTSGS
Trigger: ACTGCCTGACGTTGTCAGTCAAGACCAGCCTTGCAG...GCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR GCA 90 bp ACCAGAGATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTGCGAAATCACGGCTCACTaGAGCCTCAACCTCCTGGTC +
Preference number: 2 (lower is better)
Translates to: TRDFPKQQMTLLVSRTDCEITAH*SLNLLV
Trigger: GACCAGGAGGTTGAGGCTGCAGTGAGCCGTGATTTC...GCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CCA 90 bp ACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGACGCAGCCTCAACCTCCTaGTCTCAGGCAATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: TAFRAESLEQRFTHIFIDAASTS*SQAILP
Trigger: TGGGAGGATTGCCTGAGACCAGGAGGTTGAGGCTGC...GTCAATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTAGGCTGGAGTGGTGGTaGAATCACGGCTCACTGCAG +
Preference number: 2 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVRLEWW*NHGSLQ
Trigger: CTGCAGTGAGCCGTGATTTCACCACCACTCCAGCCT...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR GCA 90 bp CCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGCAGATATTGTCCACCGAGATCCTTaGAGGAGAAGAAAATTTGCA +
Preference number: 2 (lower is better)
Translates to: PSGWGSWPSQTCHSAADIVHRDP*RRRKFA
Trigger: TGCAAATTTTCTTCTCCTGCAAGGATCTCGGTGGAC...AATATCTGCAGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR GCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTCAAGTCTCTGCTCCCTaGGTCGGCAGAGGGATTTAT +
Preference number: 2 (lower is better)
Translates to: LTAFRAESLEQRFTHIFIQVSAP*VGRGIY
Trigger: ATAAATCCCTCTGCCGACGCAGGGAGCAGAGACTTG...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CCA 90 bp ACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGACGTTTATGGCCAGATTTaGGGGCCTGTTCCCAACACC +
Preference number: 2 (lower is better)
Translates to: TAFRAESLEQRFTHIFIDVYGQI*GPVPNT
Trigger: GGTGTTGGGAACAGGCCCCCAAATCTGGCCATAAAC...GTCAATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTAAATTTGCAGGCAAATaGACTAAATGTCTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSAKFAGK*TKCLFL
Trigger: CAGGAAGAGACATTTAGTTCATTTGCCTGCAAATTT...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR TCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTAATAAAGGGATGGGCTaGAATAAAGGGATGGGTCTG +
Preference number: 2 (lower is better)
Translates to: LTAFRAESLEQRFTHIFINKGMG*NKGMGL
Trigger: CAGACCCATCCCTTTATTTCAGCCCATCCCTTTATT...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR CAA 90 bp ACATTAAGGGGTTTTGCTAATGAAATGAATCGATATGTAAGCGTCTaGACACAGGGCTTGGGATGTAAGAAGGGCTCGATACTTCTTAGC +
Preference number: 2 (lower is better)
Translates to: TLRGFANEMNRYVSV*TQGLGCKKGSILLS
Trigger: GCTAAGAAGTATCGAGCCCTTCTTACATCCCAAGCCCTGTGTCAAGACGCTTACATATCGATTCATTTCATTAGCAAAACCCCTTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
3UTR-3UTR TCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTAAATTTGCAGGCAAATaGACTAAATGTCTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: LTAFRAESLEQRFTHIFIKFAGK*TKCLFL
Trigger: CAGGAAGAGACATTTAGTTCATTTGCCTGCAAATTT...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR CAA 90 bp TTTGCTAATGAAATGAATCGATATGTAAGCGTCTTGACACAGGGCTaGGGATGTAAGAAGGGCTCGATACTTCTTAGCTGTTATGATTAT +
Preference number: 2 (lower is better)
Translates to: FANEMNRYVSVLTQG*GCKKGSILLSCYDY
Trigger: ATAATCATAACAGCTAAGAAGTATCGAGCCCTTCTTACATCCCAAGCCCTGTGTCAAGACGCTTACATATCGATTCATTTCATTAGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
3UTR GCA 72 bp GAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCTaGTCTGGGGCAGGGTGCCGCTCCTCACTCACCAGT +
Preference number: 3 (lower is better)
Translates to: EPLLQSRCQACC*SGAGCRSSLTS
Trigger: ACTGGTGAGTGAGGAGCGGCACCCTGCCCCAGAGCAGCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR GCA 72 bp AAGCCAGTCAGTGGCCCCCTGTGGACCACCCCAGCCTaGTGGGATGAGGGTGGGCAGGAGTGCAGAGTGGGG +
Preference number: 3 (lower is better)
Translates to: KPVSGPLWTTPA*WDEGGQECRVG
Trigger: CCCCACTCTGCACTCCTGCCCACCCTCATCCCAGCAGGCTGGGGTGGTCCACAGGGGGCCACTGACTGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR GCA 72 bp GGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTaGCAGGCAGCAGTCAGCCTCTATGCCCCCGTCACC +
Preference number: 3 (lower is better)
Translates to: GRRSRSSLERPT*QAAVSLYAPVT
Trigger: GGTGACGGGGGCATAGAGGCTGACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR CCA 72 bp CCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCTGCTCTaGGGCAGGGTGCCGCTCCTCACTCACCAGTCAGCC +
Preference number: 3 (lower is better)
Translates to: PVAEPLPSLLLL*GRVPLLTHQSA
Trigger: GGCTGACTGGTGAGTGAGGAGCGGCACCCTGCCCCAGAGCAGCAGCAGGCTTGGCAGCGGCTCTGCAACAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR GCA 72 bp AATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTaGTGCTCTGGGGCAGGGTGCCGCTCCTCACTCACC +
Preference number: 3 (lower is better)
Translates to: NEPLLQSRCQAC*CSGAGCRSSLT
Trigger: GGTGAGTGAGGAGCGGCACCCTGCCCCAGAGCAGCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR GCA 72 bp GGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTaGTGCTGCTCTGGGGCAGGGTGCCGCTCCTCACTC +
Preference number: 3 (lower is better)
Translates to: GNEPLLQSRCQA*CCSGAGCRSSL
Trigger: GAGTGAGGAGCGGCACCCTGCCCCAGAGCAGCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCACATCTGGACCACATTaGGAGACGTCCTGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVTSGPH*ETSWPG
Trigger: CCCAGGCCAGGACGTCTCCAAATGTGGTCCAGATGT...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCAGGGCTGGCTCCATCTaGATGAAGGTCCTGCACATC +
Preference number: 3 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGRAGSI*MKVLHI
Trigger: GATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCT...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGACCTCTTGGAGTCCCTTaGCCATTCTCCACCCTGCTG +
Preference number: 3 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGPLGVP*PFSTLL
Trigger: CAGCAGGGTGGAGAATGGCAAAGGGACTCCAAGAGG...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTGGAAATGAGCCCCTGTaGCAGAGCCGCTGCCAAGCC +
Preference number: 3 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGGNEPL*QSRCQA
Trigger: GGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCC...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR TCA 72 bp ACGTGGGAGACCTGTCGGCAGCCCCTCTCAGTCCACTaGAGGACCGGGTCAGGTGAGGCTGAGAACTTGACC +
Preference number: 3 (lower is better)
Translates to: TWETCRQPLSVH*RTGSGEAENLT
Trigger: GGTCAAGTTCTCAGCCTCACCTGACCCGGTCCTTCAGTGGACTGAGAGGGGCTGCCGACAGGTCTCCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
3UTR GCA 72 bp CTCTGCTCCCTGCCCACGATCATTACCCCCAAAACATaGCGGCAAGTCTCTGCTCCCTGCGTCGGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: LCSLPTIITPKT*RQVSAPCVGRG
Trigger: CCCTCTGCCGACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGGGAGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR CCA 72 bp CCAGCTCTCTGGGTTTCGGGGCGGGAGGCTGAGGGCTaGCTCCATCTTGATGAAGGTCCTGCACATCTGGAC +
Preference number: 3 (lower is better)
Translates to: PALWVSGREAEG*LHLDEGPAHLD
Trigger: GTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCCGCCCCGAAACCCAGAGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGATCTCAAGGGACTGCCTaGTCCCCCAAGGAAAAAGCA +
Preference number: 3 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGSQGTA*SPKEKA
Trigger: TGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGA...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCCAGAACCTGGGTGTTTaGGGAAGAAGGCATTCATCC +
Preference number: 3 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVQNLGV*GRRHSS
Trigger: GGATGAATGCCTTCTTCCCAAAACACCCAGGTTCTG...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR GCA 72 bp GGCCTCTTGGAGTCCCTTTGCCATTCTCCACCCTGCTaGGGGCTCCAGGCAGCTGACCTCTATGAAAGCCTG +
Preference number: 3 (lower is better)
Translates to: GLLESLCHSPPC*GLQAADLYESL
Trigger: CAGGCTTTCATAGAGGTCAGCTGCCTGGAGCCCGCAGCAGGGTGGAGAATGGCAAAGGGACTCCAAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp CGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACATTGCCCAGGCTGGTCTaGAACTCCCGAGCTCCAGTG +
Preference number: 3 (lower is better)
Translates to: RPRSSKPTTFRVGVMAITLPRLV*NSRAPV
Trigger: CACTGGAGCTCGGGAGTTCAAGACCAGCCTGGGCAA...TGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CAA 90 bp GTTGATGGGGCGGGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCACCCATTGCTTCCTGTaGGATCAGCCAATGGGATGC +
Preference number: 3 (lower is better)
Translates to: VDGAGNEPLLQSRCQACCTHCFL*DQPMGC
Trigger: GCATCCCATTGGCTGATCCAACAGGAAGCAATGGGT...GCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCCCGCCCCATCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR GCA 72 bp CTTGGCCTCTTGGAGTCCCTTTGCCATTCTCCACCCTaGTGCGGGCTCCAGGCAGCTGACCTCTATGAAAGC +
Preference number: 3 (lower is better)
Translates to: LGLLESLCHSPP*CGLQAADLYES
Trigger: GCTTTCATAGAGGTCAGCTGCCTGGAGCCCGCAGCAGGGTGGAGAATGGCAAAGGGACTCCAAGAGGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR GCA 72 bp TCCTGCCACACCCCTTCCATCACCAGGTCCACAAGCTaGCTCTTGGAGCACCATCTGGGAAGGAGAGATGGC +
Preference number: 3 (lower is better)
Translates to: SCHTPSITRSTS*LLEHHLGRRDG
Trigger: GCCATCTCTCCTTCCCAGATGGTGCTCCAAGAGGCAGCTTGTGGACCTGGTGATGGAAGGGGTGTGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCATAAATTGTGCAGTATaGGTGGAAGGATGGGTAAGT +
Preference number: 3 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGINCAV*VEGWVS
Trigger: ACTTACCCATCCTTCCACCAATACTGCACAATTTAT...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTTTGCCCAGGCTGGTCTaGAACTCCCGAGCTCCAGTG +
Preference number: 3 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSALPRLV*NSRAPV
Trigger: CACTGGAGCTCGGGAGTTCAAGACCAGCCTGGGCAA...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CAA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGTGTGAACAGCCTGGTTaGTCACACAGCATGATGGCC +
Preference number: 3 (lower is better)
Translates to: RVWSGKSGVSRPSELRALCEQPG*SHSMMA
Trigger: GGCCATCATGCTGTGTGACAAACCAGGCTGTTCACA...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR TCA 72 bp CAAAAGATACGTAGCGGATGCCCTTGCCAAAGTTGGTaGAGACGTGGGAGACCTGTCGGCAGCCCCTCTCAG +
Preference number: 3 (lower is better)
Translates to: QKIRSGCPCQSW*RRGRPVGSPSQ
Trigger: CTGAGAGGGGCTGCCGACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTATCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
3UTR CCA 72 bp AGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTaGACCACATTTGGAGACGTCCTGGCCTGGGAACCT +
Preference number: 3 (lower is better)
Translates to: RAGSILMKVLHI*TTFGDVLAWEP
Trigger: AGGTTCCCAGGCCAGGACGTCTCCAAATGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGTGTTTATGGCCAGTTTaGGGGCCAGTTTATGGCCAG +
Preference number: 3 (lower is better)
Translates to: RVWSGKSGVSRPSELRALCLWPV*GPVYGQ
Trigger: CTGGCCATAAACTGGCCCCAAAACTGGCCATAAACA...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR CCA 72 bp CTCGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTaGGGGTCATGGCCATCACAAACATGTCACAGTGCT +
Preference number: 3 (lower is better)
Translates to: LALVPVNPQPSG*GSWPSQTCHSA
Trigger: AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CAA 90 bp GGGCCAGGTGTTCCTCGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGAGTGCTGCAGATATTTaGTTTATGGCCAGTTTTGGG +
Preference number: 3 (lower is better)
Translates to: GPGVPRPRSSKPTTFRVGSAADI*FMASFG
Trigger: CCCAAAACTGGCCATAAACAAAATATCTGCAGCACT...CCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCGAGGAACACCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CAA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCTCCAAGAAGTCTCCCTaGATAACCCTCTCTAAAGCA +
Preference number: 3 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTSKKSP*ITLSKA
Trigger: TGCTTTAGAGAGGGTTATCAAGGGAGACTTCTTGGA...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR TCA 72 bp TCCACTGAAGGACCGGGTCAGGTGAGGCTGAGAACTTaGCCACTTCCTTTTCATACACATCCAGAAGGCGGA +
Preference number: 3 (lower is better)
Translates to: STEGPGQVRLRT*PLPFHTHPEGG
Trigger: TCCGCCTTCTGGATGTGTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCACCTGACCCGGTCCTTCAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
3UTR GCA 72 bp AAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTaGCTCAGCGGACCTCTGCTCCCTGCCCACGATCAT +
Preference number: 3 (lower is better)
Translates to: KQQMTLLVSRTD*LSGPLLPAHDH
Trigger: ATGATCGTGGGCAGGGAGCAGAGGTCCGCTGAGGCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR CCA 72 bp GGAGCTGGAATGCTTTGGGGCAGAACCTGGGTGTTTTaGGAAGAAGGCATTCATCCTAAGCCTGTAGGCTCT +
Preference number: 3 (lower is better)
Translates to: GAGMLWGRTWVF*EEGIHPKPVGS
Trigger: AGAGCCTACAGGCTTAGGATGAATGCCTTCTTCCCAAAACACCCAGGTTCTGCCCCAAAGCATTCCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCTCTCAAGGGACTGCCTaGTCCCCCAAGGAAAAAGCA +
Preference number: 3 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVSQGTA*SPKEKA
Trigger: TGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGA...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp ACCAGAGATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTGCGCTGCAAGGCTGGTCTaGACTGACAACGTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: TRDFPKQQMTLLVSRTDCAARLV*TDNVRQ
Trigger: CTGCCTGACGTTGTCAGTCAAGACCAGCCTTGCAGC...GCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CAA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTAGTCCACCGAGATCCTaGCAGGAGAAGAAAATTTGC +
Preference number: 3 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSASPPRS*QEKKIC
Trigger: GCAAATTTTCTTCTCCTGCAAGGATCTCGGTGGACT...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CAA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACAATAAATTGTGCAGTATaGGTGGAAGGATGGGTAAGT +
Preference number: 3 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTINCAV*VEGWVS
Trigger: ACTTACCCATCCTTCCACCAATACTGCACAATTTAT...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCGCTATACATCTCTCCTaGGCCTCTTGGAGTCCCTTT +
Preference number: 3 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVAIHLS*ASWSPF
Trigger: AAAGGGACTCCAAGAGGCCAAGGAGAGATGTATAGC...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR GCA 72 bp ATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTaGGTCGGCAGAGGGATTTATAAGCCCTCTCTTATA +
Preference number: 3 (lower is better)
Translates to: ITPKTCRQVSAP*VGRGIYKPSLI
Trigger: TATAAGAGAGGGCTTATAAATCCCTCTGCCGACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CAA 90 bp ACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGACGCTGCAAGGCTGGTCTaGACTGACAACGTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: TAFRAESLEQRFTHIFIDAARLV*TDNVRQ
Trigger: CTGCCTGACGTTGTCAGTCAAGACCAGCCTTGCAGC...GTCAATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR CCA 72 bp GTTCCAGTAAACCCACAACCTTCAGGGTGGGGGTCATaGCCATCACAAACATGTCACAGTGCTGCAGATATT +
Preference number: 3 (lower is better)
Translates to: VPVNPQPSGWGS*PSQTCHSAADI
Trigger: AATATCTGCAGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CAA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTTGTTTATGGCCAGTTTaGGGGCCAGTTTATGGCCAG +
Preference number: 3 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFCLWPV*GPVYGQ
Trigger: CTGGCCATAAACTGGCCCCAAAACTGGCCATAAACA...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR GCA 72 bp CAGGGTATTTATCCTCTTAGGTCCTTCTCAAGGGACTaGCTTGTCCCCCAAGGAAAAAGCAAATCTCCATGG +
Preference number: 3 (lower is better)
Translates to: QGIYPLRSFSRD*LVPQGKSKSPW
Trigger: CCATGGAGATTTGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGACCTAAGAGGATAAATACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR-3UTR CAA 90 bp ACCAGAGATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTGCAGTCCACCGAGATCCTaGCAGGAGAAGAAAATTTGC +
Preference number: 3 (lower is better)
Translates to: TRDFPKQQMTLLVSRTDCSPPRS*QEKKIC
Trigger: GCAAATTTTCTTCTCCTGCAAGGATCTCGGTGGACT...GCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR TCA 72 bp TACTTCTTAGCTGTTATGATTATAGATATCCAGGAGTaGCAGAAGGGAAACCGAGCAGACGAGAGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: YFLAVMIIDIQE*QKGNRADERLG
Trigger: GCCCAGCCTCTCGTCTGCTCGGTTTCCCTTCTGTCACTCCTGGATATCTATAATCATAACAGCTAAGAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
3UTR CCA 72 bp TTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATaGGTCTGGCTAGTTATCTGCAGCAGGAACATGTCG +
Preference number: 3 (lower is better)
Translates to: LQEIKGWAEIKG*VWLVICSRNMS
Trigger: CGACATGTTCCTGCTGCAGATAACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR-3UTR CAA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTAAACAGCAGATGACTTaGTTAGTCTCAAGGACAGAC +
Preference number: 3 (lower is better)
Translates to: LTAFRAESLEQRFTHIFIKQQMT*LVSRTD
Trigger: GTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTT...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCAAGAGTCCTGGCGGGCTaGTCGGAGGCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPRVLAG*SEAAAA
Trigger: CGCCGCTGCCGCCTCCGAGCAGCCCGCCAGGACTCT...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR GCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCAAGCCACTGCGTAGAGTaGGCGGCCCTCGGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPSHCVE*AALGAA
Trigger: CGCAGCGCCGAGGGCCGCGCACTCTACGCAGTGGCT...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCAGCCGCTGCCAAGCCTaGTGCTGCTCTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGSRCQA*CCSGAG
Trigger: CCCTGCCCCAGAGCAGCAGCAGGCTTGGCAGCGGCT...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCCTCGAGCGCCCCACCTaGCAGGCAGCAGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGLERPT*QAAVSL
Trigger: GAGGCTGACTGCTGCCTGGCAGGTGGGGCGCTCGAG...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGGCGCGGCACACTaGGCGGCATCGCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPPGAAH*AASRDQ
Trigger: TTGGTCACGCGATGCCGCCCAGTGTGCCGCGCCTGG...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCAGTGGAGCCAGAGCCCTaGGGTGGAGCCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPVEPEP*GGARAW
Trigger: CCAGGCTCTGGCTCCACCCCAGGGCTCTGGCTCCAC...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GTTGATGGGGCGGGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCAGCCACTGCGTAGAGTaGGCGGCCCTCGGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: VDGAGNEPLLQSRCQACCSHCVE*AALGAA
Trigger: CGCAGCGCCGAGGGCCGCGCACTCTACGCAGTGGCT...GCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCCCGCCCCATCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACAGCCGTTCCCGCCATaGTCCACCTCCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPQPFPP*STSQPL
Trigger: CAGAGGCTGGGAGGTGGAGCATGGCGGGAACGGCTG...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCGTGACCAAGGAGCGTaGCGGCACGTGGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GPGAGRRSRSSLERPTSQRDQGA*RHVAQH
Trigger: GTGCTGAGCCACGTGCCGCCACGCTCCTTGGTCACG...CTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCAACCCAGCCAGCTCTCTaGGTTTCGGGGCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPTQPAL*VSGREA
Trigger: AGCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGT...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTTCGAGGGGCTCCCCGTaGTCGGCGTGGCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PAHDHYPQNMPASLCSLRSRGSP*SAWPRG
Trigger: CCCCCTGGGCCACGCCGATCACGGGGAGCCCCTCGA...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp ATGCCCTTGCCAAAGTTGGTGAAGACGTGGGAGACCTGTCGGCAGCCCCTCTCATCGAGGGGCTCCCCGTaGTCGGCGTGGCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: MPLPKLVKTWETCRQPLSSRGSP*SAWPRG
Trigger: CCCCCTGGGCCACGCCGATCACGGGGAGCCCCTCGA...TGAGAGGGGCTGCCGACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGGGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR TCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGTCGAGGGGCTCCCCGTaGTCGGCGTGGCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGSRGSP*SAWPRG
Trigger: CCCCCTGGGCCACGCCGATCACGGGGAGCCCCTCGA...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCAACAAAGGGTGCACAGTaGCAGCCGCTACCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPTKGAQ*QPLPVG
Trigger: CCCCACGGGTAGCGGCTGTCACTGTGCACCCTTTGT...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGCAGCGTTGAGCCACTaGGTAGAGTGCGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGAALSH*VECAAL
Trigger: GAGGGCCGCGCACTCTACGCAGTGGCTCAACGCTGC...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCCACACACCAGGCGCGGCACACTaGGCGGCATCGCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: ELVDAAAVLSSAPPVSHTPGAAH*AASRDQ
Trigger: TTGGTCACGCGATGCCGCCCAGTGTGCCGCGCCTGG...TGTGTGGCTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCAGGAGACGTCCTGGCCTaGGAACCTCTAGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPGDVLA*EPLGEE
Trigger: CTCCTCCCCTAGAGGTTCCCAGGCCAGGACGTCTCC...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp CTCGAGCGCCCCACCAGTCAGCCACACAGATCTCAATCTGGGCGCTGTCCAGCACCACCTCCCAGCCTCTaGAGCCCTGCTCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LERPTSQPHRSQSGRCPAPPPSL*SPALRR
Trigger: CCTGCGGAGAGCAGGGCTTCAGAGGCTGGGAGGTGG...TGCTGGACAGCGCCCAGATTGAGATCTGTGTGGCTGACTGGTGGGGCGCTCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR GCA 90 bp CTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCAGAGTCCTGGCGGGCTaGTCGGAGGCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: LPTIITPKTCRQVSAPCVRVLAG*SEAAAA
Trigger: CGCCGCTGCCGCCTCCGAGCAGCCCGCCAGGACTCT...GACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp GTTGATGGGGCGGGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCCAGCCGTTCCCGCCATaGTCCACCTCCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VDGAGNEPLLQSRCQACCQPFPP*STSQPL
Trigger: CAGAGGCTGGGAGGTGGAGCATGGCGGGAACGGCTG...GCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCCCGCCCCATCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGATGCTCTGGGGCAGGGTaGCGCTCCTCACTCACCAGT +
Preference number: 4 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGCSGAG*RSSLTS
Trigger: ACTGGTGAGTGAGGAGCGGCACCCTGCCCCAGAGCA...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCGAAATGAGCCCCTGTTaGAGAGCCGCTGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGEMSPC*RAAAKP
Trigger: AGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTC...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGGTCCAGGGCCAGGGATaGGTCCGCCGGCAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: RVWSGKSGVSRPSELRALVQGQG*VRRQPS
Trigger: CGACGGCTGCCGGCGGACCCATCCCTGGCCCTGGAC...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp AGACGTGGGAGACCTGTCGGCAGCCCCTCTCAGTCCACTGAAGGACCGGGTCAGCGTGACCAAGGAGCGTaGCGGCACGTGGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: RRGRPVGSPSQSTEGPGQRDQGA*RHVAQH
Trigger: GTGCTGAGCCACGTGCCGCCACGCTCCTTGGTCACG...CTGACCCGGTCCTTCAGTGGACTGAGAGGGGCTGCCGACAGGTCTCCCACGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp GGGCCAGGTGTTCCTCGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGCCAGGCGCGGCACACTaGGCGGCATCGCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: GPGVPRPRSSKPTTFRVGPGAAH*AASRDQ
Trigger: TTGGTCACGCGATGCCGCCCAGTGTGCCGCGCCTGG...CCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCGAGGAACACCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCTATCAAGCCAGTCAGTaGCCCCCTGTGGACCACCCC +
Preference number: 4 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVYQASQ*PPVDHP
Trigger: GGGGTGGTCCACAGGGGGCCACTGACTGGCTTGATA...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGCTGGGCGGCATCGCGTaGCCAAGGAGCGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: RVWSGKSGVSRPSELRALLGGIA*PRSVAA
Trigger: TGCCGCCACGCTCCTTGGTCACGCGATGCCGCCCAG...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCCCACCTCCCAGCCTCTaGAGCCCTGCTCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTPPPSL*SPALRR
Trigger: CCTGCGGAGAGCAGGGCTTCAGAGGCTGGGAGGTGG...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp TTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAAGAGTCCTGGCGGGCTaGTCGGAGGCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: FLFIHIQKADPELVDAAARVLAG*SEAAAA
Trigger: CGCCGCTGCCGCCTCCGAGCAGCCCGCCAGGACTCT...TGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR GCA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAGCCACTGCGTAGAGTaGGCGGCCCTCGGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: RVWSGKSGVSRPSELRALSHCVE*AALGAA
Trigger: CGCAGCGCCGAGGGCCGCGCACTCTACGCAGTGGCT...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTCCTTGTCTTCGTTaGTGGGCAGGCAGCGTTGAG +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPPPCLR*WAGSVE
Trigger: CTCAACGCTGCCTGCCCAGCAACGAAGACAAGGAGG...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTTGCCAAGCCTGCTGCTaGTCTGGGGCAGGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGCQACC*SGAGCR
Trigger: GCGGCACCCTGCCCCAGAGCAGCAGCAGGCTTGGCA...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCCGCTGCCAAGCCTGCTaGTGCTCTGGGGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTRCQAC*CSGAGC
Trigger: GCACCCTGCCCCAGAGCAGCAGCAGGCTTGGCAGCG...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp ATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGCGCTGCCAAGCCTGCTaGTGCTCTGGGGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: IHIQKADPELVDAAAVLSRCQAC*CSGAGC
Trigger: GCACCCTGCCCCAGAGCAGCAGCAGGCTTGGCAGCG...CGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCCCTCATCACAAAGGGTaGACAGTGACAGCCGCTACC +
Preference number: 4 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGPHHKG*TVTAAT
Trigger: GGTAGCGGCTGTCACTGTGCACCCTTTGTGATGAGG...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCCACACAGCAGCAGCCACACAGTaGGCCCGTCCACTATGTCGC +
Preference number: 4 (lower is better)
Translates to: ELVDAAAVLSSAPPVSHTAAATQ*ARPLCR
Trigger: GCGACATAGTGGACGGGCCCACTGTGTGGCTGCTGC...TGTGTGGCTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp GGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCCTTGTCTTCGTTGCTaGGCAGGCAGCGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GPGAGRRSRSSLERPTSQPCLRC*AGSVEP
Trigger: TGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAGG...CTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCTGTTGGATCAGCCAATaGGATGCTCCGGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGCWISQ*DAPAGD
Trigger: ATCCCCTGCCGGAGCATCCCATTGGCTGATCCAACA...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTAGCCTGCTGCTGCTCTaGGGCAGGGTGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGSLLLL*GRVPLL
Trigger: GAGGAGCGGCACCCTGCCCCAGAGCAGCAGCAGGCT...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCCCTTCAGAGACCCTaGGCATCCACAAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPPLQRP*ASTRWS
Trigger: TGACCACCTTGTGGATGCCCAGGGTCTCTGAAGGGG...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGCCACCTCCCAGCCTCTaGAGCCCTGCTCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGPPPSL*SPALRR
Trigger: CCTGCGGAGAGCAGGGCTTCAGAGGCTGGGAGGTGG...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACACCCAGCCTGCTGGGATaGGGGTGGGCAGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTPSLLG*GWAGVQ
Trigger: CTGCACTCCTGCCCACCCTCATCCCAGCAGGCTGGG...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTGCAGCGTTGAGCCACTaGGTAGAGTGCGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGAALSH*VECAAL
Trigger: GAGGGCCGCGCACTCTACGCAGTGGCTCAACGCTGC...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCTGGAATAGAACAAAGTaGCAGGAACCGGCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGWNRTK*QEPAER
Trigger: GCGCTCAGCCGGTTCCTGGCACTTTGTTCTATTCCA...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCGCAGCCCTCAGGGTTTaGTCTAGCAGACCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGAALRV*SSRPED
Trigger: ATCTTCAGGTCTGCTAGAGCAAACCCTGAGGGCTGC...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACAAGCCGCTGCCAAGCCTaGTGCTGCTCTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTSRCQA*CCSGAG
Trigger: CCCTGCCCCAGAGCAGCAGCAGGCTTGGCAGCGGCT...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTGAGCGTGGCGGCACGTaGCTCAGCACCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PAHDHYPQNMPASLCSLRERGGT*LSTCTS
Trigger: GCTGGTGCAGGTGCTGAGCCACGTGCCGCCACGCTC...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GGGCCAGGTGTTCCTCGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGCAGCAGCCACACAGTaGGCCCGTCCACTATGTCGC +
Preference number: 4 (lower is better)
Translates to: GPGVPRPRSSKPTTFRVGAAATQ*ARPLCR
Trigger: GCGACATAGTGGACGGGCCCACTGTGTGGCTGCTGC...CCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCGAGGAACACCTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCAACACAGATCTCAATCTaGGCGCTGTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPTQISI*ALSSSS
Trigger: GGAGCTGCTGGACAGCGCCCAGATTGAGATCTGTGT...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
CDS-3UTR CCA 90 bp CCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCCACACACAGATCTCAATCTaGGCGCTGTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PELVDAAAVLSSAPPVSHTQISI*ALSSSS
Trigger: GGAGCTGCTGGACAGCGCCCAGATTGAGATCTGTGT...GTGGCTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTACCCAGCCAGCTCTCTaGGTTTCGGGGCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGTQPAL*VSGREA
Trigger: AGCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGT...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp CTGCTCAAAAGATACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACGTGGGATCGAGGGGCTCCCCGTaGTCGGCGTGGCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LLKRYVADALAKVGEDVGSRGSP*SAWPRG
Trigger: CCCCCTGGGCCACGCCGATCACGGGGAGCCCCTCGA...TCCCACGTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTATCTTTTGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR TCA 90 bp TTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCACCACCTCCCAGCCTCTaGAGCCCTGCTCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: FLFIHIQKADPELVDAAAPPPSL*SPALRR
Trigger: CCTGCGGAGAGCAGGGCTTCAGAGGCTGGGAGGTGG...TGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
CDS-3UTR TCA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGACTCCCGAGCTCCAGTaGTCCTCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RVWSGKSGVSRPSELRALTPELQ*SSHLGL
Trigger: GAGGCCGAGGTGGGAGGATCACTGGAGCTCGGGAGT...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp GTTGATGGGGCGGGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCCACATACTAGACATGTaGGCGGGGAGCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VDGAGNEPLLQSRCQACCHILDM*AGSSVA
Trigger: GGCCACAGAGCTCCCCGCTCACATGTCTAGTATGTG...GCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCCCGCCCCATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp TTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCACCCAGCCTGCTGGGATaGGGGTGGGCAGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: FLFIHIQKADPELVDAAAPSLLG*GWAGVQ
Trigger: CTGCACTCCTGCCCACCCTCATCCCAGCAGGCTGGG...TGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp GTTGATGGGGCGGGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCGGGTGGTCCTGCGGTTaGTTCTGGAGGCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: VDGAGNEPLLQSRCQACCGWSCG*FWRLLG
Trigger: ACCCAAAAGCCTCCAGAATCAACCGCAGGACCACCC...GCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCCCGCCCCATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp AGATACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACGTGGGAGACCTGTCGAGCCACTGCGTAGAGTaGGCGGCCCTCGGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: RYVADALAKVGEDVGDLSSHCVE*AALGAA
Trigger: CGCAGCGCCGAGGGCCGCGCACTCTACGCAGTGGCT...CGACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR GCA 90 bp GTTGATGGGGCGGGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCCCTCCTTGTCTTCGTTaGTGGGCAGGCAGCGTTGAG +
Preference number: 4 (lower is better)
Translates to: VDGAGNEPLLQSRCQACCPPCLR*WAGSVE
Trigger: CTCAACGCTGCCTGCCCAGCAACGAAGACAAGGAGG...GCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCCCGCCCCATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGCAGCCGTTCCCGCCATaGTCCACCTCCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RVWSGKSGVSRPSELRALQPFPP*STSQPL
Trigger: CAGAGGCTGGGAGGTGGAGCATGGCGGGAACGGCTG...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGCAGCCGTTCCCGCCATaGTCCACCTCCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGQPFPP*STSQPL
Trigger: CAGAGGCTGGGAGGTGGAGCATGGCGGGAACGGCTG...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp AGAAGGGAAACCGAGCAGACGAGAGGCTGGGCGTGTGTGCCTTTAGCGGGTCGGCTGTCCAGCAGCTCCTaGCACACCCCTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: RRETEQTRGWACVPLAGRLSSSS*HTPSIT
Trigger: GGTGATGGAAGGGGTGTGGCAGGAGCTGCTGGACAG...CCGACCCGCTAAAGGCACACACGCCCAGCCTCTCGTCTGCTCGGTTTCCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR GCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTCATTCTCCACCCTGCTaGGGGCTCCAGGCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGHSPPC*GLQAAD
Trigger: GTCAGCTGCCTGGAGCCCGCAGCAGGGTGGAGAATG...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAACCAGGTCCACAAGCTaGCTCTTGGAGCACCATCTG +
Preference number: 4 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGTRSTS*LLEHHL
Trigger: CAGATGGTGCTCCAAGAGGCAGCTTGTGGACCTGGT...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GTTGATGGGGCGGGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCTACCTTCCCCGGCTCTaGATCACTTCCCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: VDGAGNEPLLQSRCQACCYLPRL*ITSPLS
Trigger: GCTGAGAGGGGAAGTGATGCAGAGCCGGGGAAGGTA...GCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCCCGCCCCATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp TTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCACTCGAGCGCCCCACCTaGCAGGCAGCAGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FLFIHIQKADPELVDAAALERPT*QAAVSL
Trigger: GAGGCTGACTGCTGCCTGGCAGGTGGGGCGCTCGAG...TGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp TACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACGTGGGAGACCTGTCGGCAGAGCGTGGCGGCACGTaGCTCAGCACCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: YVADALAKVGEDVGDLSAERGGT*LSTCTS
Trigger: GCTGGTGCAGGTGCTGAGCCACGTGCCGCCACGCTC...TGCCGACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCGTGACCAAGGAGCGTaGCGGCACGTGGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PAHDHYPQNMPASLCSLRRDQGA*RHVAQH
Trigger: GTGCTGAGCCACGTGCCGCCACGCTCCTTGGTCACG...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGCGTGACCAAGGAGCGTaGCGGCACGTGGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGRDQGA*RHVAQH
Trigger: GTGCTGAGCCACGTGCCGCCACGCTCCTTGGTCACG...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCCACACAAAGTTGGTGAAGACGTaGGAGACCTGTCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ELVDAAAVLSSAPPVSHTKLVKT*ETCRQP
Trigger: GGGCTGCCGACAGGTCTCCCACGTCTTCACCAACTT...TGTGTGGCTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGATCTTGGAGCACCATCTaGGAAGGAGAGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGSWSTI*EGEMAG
Trigger: CCCTGCCATCTCTCCTTCCCAGATGGTGCTCCAAGA...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGACCACAAGCTGCCTCTTaGAGCACCATCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGPQAAS*STIWEG
Trigger: TCCTTCCCAGATGGTGCTCCAAGAGGCAGCTTGTGG...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCGGAGCTGGAATGCTTTaGGGCAGAACCTGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVGAGML*GRTWVF
Trigger: AAACACCCAGGTTCTGCCCCAAAGCATTCCAGCTCC...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCAGGAGCTGGAATGCTTTaGGGCAGAACCTGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPGAGML*GRTWVF
Trigger: AAACACCCAGGTTCTGCCCCAAAGCATTCCAGCTCC...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp AGAAGGGAAACCGAGCAGACGAGAGGCTGGGCGTGTGTGCCTTTAGCGGGTCGGGAGCAGACGAGAGGCTaGGCGTGTGTGCCTTTAGCG +
Preference number: 4 (lower is better)
Translates to: RRETEQTRGWACVPLAGREQTRG*ACVPLA
Trigger: CGCTAAAGGCACACACGCCCAGCCTCTCGTCTGCTC...CCGACCCGCTAAAGGCACACACGCCCAGCCTCTCGTCTGCTCGGTTTCCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR TCA 90 bp ATGCCCTTGCCAAAGTTGGTGAAGACGTGGGAGACCTGTCGGCAGCCCCTCTCACCCCTCTCAGTCCACTaGAGGACCGGGTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: MPLPKLVKTWETCRQPLSPLSVH*RTGSGE
Trigger: CTCACCTGACCCGGTCCTTCAGTGGACTGAGAGGGG...TGAGAGGGGCTGCCGACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR TCA 90 bp GGTGAAGACGTGGGAGACCTGTCGGCAGCCCCTCTCAGTCCACTGAAGGACCGGCCTTGCCAAAGTTGGTaGAGACGTGGGAGACCTGTC +
Preference number: 4 (lower is better)
Translates to: GEDVGDLSAAPLSPLKDRPCQSW*RRGRPV
Trigger: GACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGG...CCGGTCCTTCAGTGGACTGAGAGGGGCTGCCGACAGGTCTCCCACGTCTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR TCA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCCCACCCAAGCCTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: PAHDHYPQNMPASLCSLRPTQAS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAGGCTTGGGTGGG...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCAACCTCTATGAAAGCCTaGCCCTCATCTTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPTSMKA*PSSLWD
Trigger: GTCCCACAAAGATGAGGGTCAGGCTTTCATAGAGGT...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTCCCAACTATGCTCCCTaGGCCTCAGCTCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGPNYAP*ASAHRA
Trigger: TGCCCTGTGAGCTGAGGCTCAGGGAGCATAGTTGGG...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp TACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACGTGGGAGACCTGTCGGCAGCAGCGTTGAGCCACTaGGTAGAGTGCGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: YVADALAKVGEDVGDLSAAALSH*VECAAL
Trigger: GAGGGCCGCGCACTCTACGCAGTGGCTCAACGCTGC...TGCCGACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR GCA 90 bp TTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCACAGCCGTTCCCGCCATaGTCCACCTCCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FLFIHIQKADPELVDAAAQPFPP*STSQPL
Trigger: CAGAGGCTGGGAGGTGGAGCATGGCGGGAACGGCTG...TGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
CDS-3UTR GCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGATGCCGGCAAGTCTCTaGTCCCTGCGTCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGMPASL*SLRRQR
Trigger: CCTCTGCCGACGCAGGGAGCAGAGACTTGCCGGCAT...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTATGCCGGCAAGTCTCTaGTCCCTGCGTCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PAHDHYPQNMPASLCSLRMPASL*SLRRQR
Trigger: CCTCTGCCGACGCAGGGAGCAGAGACTTGCCGGCAT...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCTCCTTCTCAAGGGACTaGCTTGTCCCCCAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVSFSRD*LVPQGK
Trigger: TTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGA...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACATGCTCTGGGGCAGGGTaGCGCTCCTCACTCACCAGT +
Preference number: 4 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTCSGAG*RSSLTS
Trigger: ACTGGTGAGTGAGGAGCGGCACCCTGCCCCAGAGCA...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GCTTCCTGTTGGATCAGCCAATGGGATGCTCCGGCAGGGGATGGAAGTGAAAGATGCCAAGCCTGCTGCTaGTCTGGGGCAGGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: ASCWISQWDAPAGDGSERCQACC*SGAGCR
Trigger: GCGGCACCCTGCCCCAGAGCAGCAGCAGGCTTGGCA...TCTTTCACTTCCATCCCCTGCCGGAGCATCCCATTGGCTGATCCAACAGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp ATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGCTGTTGCAGAGCCGCTaGCAAGCCTGCTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: IHIQKADPELVDAAAVLSLLQSR*QACCCS
Trigger: AGAGCAGCAGCAGGCTTGGCAGCGGCTCTGCAACAG...CGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACAAGCAGTCAGCCTCTATaGCCCCGTCACCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTSSQPL*PRHPAS
Trigger: GCTGGCTGGGTGACGGGGGCATAGAGGCTGACTGCT...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GGTGAAGACGTGGGAGACCTGTCGGCAGCCCCTCTCAGTCCACTGAAGGACCGGTTTCCCACTTTGTTCTaGGAGGCAGTCGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GEDVGDLSAAPLSPLKDRFPTLF*EAVEGL
Trigger: GAGCCCCTCGACTGCCTCCCAGAACAAAGTGGGAAA...CCGGTCCTTCAGTGGACTGAGAGGGGCTGCCGACAGGTCTCCCACGTCTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp AGACGTGGGAGACCTGTCGGCAGCCCCTCTCAGTCCACTGAAGGACCGGGTCAGTTTCCCACTTTGTTCTaGGAGGCAGTCGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RRGRPVGSPSQSTEGPGQFPTLF*EAVEGL
Trigger: GAGCCCCTCGACTGCCTCCCAGAACAAAGTGGGAAA...CTGACCCGGTCCTTCAGTGGACTGAGAGGGGCTGCCGACAGGTCTCCCACGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp CCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCCACTTAGGTTCTTTTCTATaGCCCAGCCGTTCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: PELVDAAAVLSSAPPVSHLGSFL*PSRSRH
Trigger: ATGGCGGGAACGGCTGGGCCATAGAAAAGAACCTAA...GTGGCTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp AGACGTGGGAGACCTGTCGGCAGCCCCTCTCAGTCCACTGAAGGACCGGGTCAGACACAGATCTCAATCTaGGCGCTGTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RRGRPVGSPSQSTEGPGQTQISI*ALSSSS
Trigger: GGAGCTGCTGGACAGCGCCCAGATTGAGATCTGTGT...CTGACCCGGTCCTTCAGTGGACTGAGAGGGGCTGCCGACAGGTCTCCCACGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp GTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCCACACAGATCTCAAGTTGGTGAAGACGTaGGAGACCTGTCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VDAAAVLSSAPPVSHTDLKLVKT*ETCRQP
Trigger: GGGCTGCCGACAGGTCTCCCACGTCTTCACCAACTT...GAGATCTGTGTGGCTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAGCGGTTTTCCGCCCTaGGTGGGCCAGGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RVWSGKSGVSRPSELRALSGFPP*VGQVFL
Trigger: GAGGAACACCTGGCCCACCCAGGGCGGAAAACCGCT...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp AGACGTGGGAGACCTGTCGGCAGCCCCTCTCAGTCCACTGAAGGACCGGGTCAGCCACAAGCTGCCTCTTaGAGCACCATCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RRGRPVGSPSQSTEGPGQPQAAS*STIWEG
Trigger: TCCTTCCCAGATGGTGCTCCAAGAGGCAGCTTGTGG...CTGACCCGGTCCTTCAGTGGACTGAGAGGGGCTGCCGACAGGTCTCCCACGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCTTTTGGGTAGGTAGTTaGGGGACGGGAAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVFWVGS*GTGKDA
Trigger: AGCATCCTTTCCCGTCCCCCAACTACCTACCCAAAA...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCATTTTGGGTAGGTAGTTaGGGGACGGGAAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPFWVGS*GTGKDA
Trigger: AGCATCCTTTCCCGTCCCCCAACTACCTACCCAAAA...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTCCACCTCCCAGCCTCTaGAGCCCTGCTCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSAPPPSL*SPALRR
Trigger: CCTGCGGAGAGCAGGGCTTCAGAGGCTGGGAGGTGG...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp GGGCCAGGTGTTCCTCGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGCTGCAAGGCTGGTCTTaGCTGACAACGTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GPGVPRPRSSKPTTFRVGLQGWS*LTTSGS
Trigger: ACTGCCTGACGTTGTCAGTCAAGACCAGCCTTGCAG...CCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCGAGGAACACCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp ATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGCACATACTAGACATGTaGGCGGGGAGCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: IHIQKADPELVDAAAVLSHILDM*AGSSVA
Trigger: GGCCACAGAGCTCCCCGCTCACATGTCTAGTATGTG...CGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GACCTGAAGATGCATGATGGGCTATACATCTCTCCTTGGCCTCTTGGAGTCCCTAGCCACTGCGTAGAGTaGGCGGCCCTCGGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: DLKMHDGLYISPWPLGVPSHCVE*AALGAA
Trigger: CGCAGCGCCGAGGGCCGCGCACTCTACGCAGTGGCT...AGGGACTCCAAGAGGCCAAGGAGAGATGTATAGCCCATCATGCATCTTCAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp ATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGCCTCCTTGTCTTCGTTaGTGGGCAGGCAGCGTTGAG +
Preference number: 4 (lower is better)
Translates to: IHIQKADPELVDAAAVLSPPCLR*WAGSVE
Trigger: CTCAACGCTGCCTGCCCAGCAACGAAGACAAGGAGG...CGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACACTGTCCAGCAGCTCCTaGCACACCCCTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: RPRSSKPTTFRVGVMAITLSSSS*HTPSIT
Trigger: GGTGATGGAAGGGGTGTGGCAGGAGCTGCTGGACAG...TGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACACTGTCCAGCAGCTCCTaGCACACCCCTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTLSSSS*HTPSIT
Trigger: GGTGATGGAAGGGGTGTGGCAGGAGCTGCTGGACAG...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GGGCCAGGTGTTCCTCGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGAAATCACGGCTCACTaGAGCCTCAACCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GPGVPRPRSSKPTTFRVGEITAH*SLNLLV
Trigger: GACCAGGAGGTTGAGGCTGCAGTGAGCCGTGATTTC...CCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCGAGGAACACCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGTCTCTGTCACCCATTaGTTCCTGTTGGATCAGCCA +
Preference number: 4 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGVSVTH*FLLDQP
Trigger: TGGCTGATCCAACAGGAAGCAATGGGTGACAGAGAC...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTGAAATGAGCCCCTGTTaGAGAGCCGCTGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGEMSPC*RAAAKP
Trigger: AGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTC...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTTACCTTCCCCGGCTCTaGATCACTTCCCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGYLPRL*ITSPLS
Trigger: GCTGAGAGGGGAAGTGATGCAGAGCCGGGGAAGGTA...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCCCTTGTCTTCGTTGCTaGGCAGGCAGCGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTPCLRC*AGSVEP
Trigger: TGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAGG...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGATTAGGTTCTTTTCTATaGCCCAGCCGTTCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGLGSFL*PSRSRH
Trigger: ATGGCGGGAACGGCTGGGCCATAGAAAAGAACCTAA...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp CGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACACTGACACTCCCCTTCTaGGGGGCTGAGGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RPRSSKPTTFRVGVMAITLTLPF*GAEEAV
Trigger: CACAGCTTCCTCAGCCCCCCAGAAGGGGAGTGTCAG...TGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCTGGGCATCCACAAGGTaGTCAGGGGAGGTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTWASTR*SGEVSR
Trigger: ACGAGACACCTCCCCTGACCACCTTGTGGATGCCCA...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCCGGGAGGCTGAGGGCTaGCTCCATCTTGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTREAEG*LHLDEG
Trigger: ACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCCG...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCCCACCTCCCAGCCTCTaGAGCCCTGCTCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVPPPSL*SPALRR
Trigger: CCTGCGGAGAGCAGGGCTTCAGAGGCTGGGAGGTGG...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp CAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCAGTGAGGCTGAGAACTTaGCCACTTCCTTTTCATACA +
Preference number: 4 (lower is better)
Translates to: QKADPELVDAAAVLSSAPVRLRT*PLPFHT
Trigger: TGTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCAC...TGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
CDS-3UTR TCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGAGGCTGGAGTGGTGGTaGAATCACGGCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGRLEWW*NHGSLQ
Trigger: CTGCAGTGAGCCGTGATTTCACCACCACTCCAGCCT...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGCCTCCTTGTCTTCGTTaGTGGGCAGGCAGCGTTGAG +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGPPCLR*WAGSVE
Trigger: CTCAACGCTGCCTGCCCAGCAACGAAGACAAGGAGG...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp CAGGCAGCTGACCTCTATGAAAGCCTGACCCTCATCTTTGTGGGACAGGACATGCAGCCGTTCCCGCCATaGTCCACCTCCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QAADLYESLTLIFVGQDMQPFPP*STSQPL
Trigger: CAGAGGCTGGGAGGTGGAGCATGGCGGGAACGGCTG...CATGTCCTGTCCCACAAAGATGAGGGTCAGGCTTTCATAGAGGTCAGCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCGTCTCAAGGACAGACTaGCTCAGCGGACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LPTIITPKTCRQVSAPCVVSRTD*LSGPLL
Trigger: GAGCAGAGGTCCGCTGAGGCAGTCTGTCCTTGAGAC...GACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp CTGCTCAAAAGATACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACGTGGGAGAGCGTGGCGGCACGTaGCTCAGCACCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: LLKRYVADALAKVGEDVGERGGT*LSTCTS
Trigger: GCTGGTGCAGGTGCTGAGCCACGTGCCGCCACGCTC...TCCCACGTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTATCTTTTGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGCCTTGTCTTCGTTGCTaGGCAGGCAGCGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGPCLRC*AGSVEP
Trigger: TGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAGG...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTAAGTTGGTGAAGACGTaGGAGACCTGTCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PAHDHYPQNMPASLCSLRKLVKT*ETCRQP
Trigger: GGGCTGCCGACAGGTCTCCCACGTCTTCACCAACTT...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGAAGTTGGTGAAGACGTaGGAGACCTGTCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGKLVKT*ETCRQP
Trigger: GGGCTGCCGACAGGTCTCCCACGTCTTCACCAACTT...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGGGCCTCCTGAAGTGCTaGGATTCCACAGGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGGLLKC*DSTGVS
Trigger: GCTCACACCTGTGGAATCCCAGCACTTCAGGAGGCC...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp CGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAGCAGCCTCAACCTCCTaGTCTCAGGCAATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RPRSSKPTTFRVGVMAITAASTS*SQAILP
Trigger: TGGGAGGATTGCCTGAGACCAGGAGGTTGAGGCTGC...TGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTGAGCCCTACTGTCCCTaGGTATCCTCTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PAHDHYPQNMPASLCSLREPYCP*VSSGFW
Trigger: CCAGAAGCCAGAGGATACCCAGGGACAGTAGGGCTC...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTTGTTGGATCAGCCAATaGGATGCTCCGGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGCWISQ*DAPAGD
Trigger: ATCCCCTGCCGGAGCATCCCATTGGCTGATCCAACA...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCAGCCTGCTGCTGCTCTaGGGCAGGGTGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVSLLLL*GRVPLL
Trigger: GAGGAGCGGCACCCTGCCCCAGAGCAGCAGCAGGCT...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCGTGGAGCCAGAGCCCTaGGGTGGAGCCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVVEPEP*GGARAW
Trigger: CCAGGCTCTGGCTCCACCCCAGGGCTCTGGCTCCAC...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GTTGATGGGGCGGGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCAAGGTCCTGCACATCTaGACCACATTTGGAGACGTC +
Preference number: 4 (lower is better)
Translates to: VDGAGNEPLLQSRCQACCKVLHI*TTFGDV
Trigger: GACGTCTCCAAATGTGGTCCAGATGTGCAGGACCTT...GCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCCCGCCCCATCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGCCTTGCCAAAGTTGGTaGAGACGTGGGAGACCTGTC +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGPCQSW*RRGRPV
Trigger: GACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGG...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCTGCAAGGCTGGTCTTaGCTGACAACGTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PAHDHYPQNMPASLCSLRLQGWS*LTTSGS
Trigger: ACTGCCTGACGTTGTCAGTCAAGACCAGCCTTGCAG...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp CCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGCAGATATTACTCCCGAGCTCCAGTaGTCCTCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSGWGSWPSQTCHSAADITPELQ*SSHLGL
Trigger: GAGGCCGAGGTGGGAGGATCACTGGAGCTCGGGAGT...AATATCTGCAGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp GGGCCAGGTGTTCCTCGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGCCTTTGTTTTGTGACTaGGTCCACCGAGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: GPGVPRPRSSKPTTFRVGPLFCD*VHRDPC
Trigger: GCAAGGATCTCGGTGGACTCAGTCACAAAACAAAGG...CCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCGAGGAACACCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp GTCTCTCCCGTACTGCTCAAAAGATACGTAGCGGATGCCCTTGCCAAAGTTGGTGCAGCGTTGAGCCACTaGGTAGAGTGCGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: VSPVLLKRYVADALAKVGAALSH*VECAAL
Trigger: GAGGGCCGCGCACTCTACGCAGTGGCTCAACGCTGC...ACCAACTTTGGCAAGGGCATCCGCTACGTATCTTTTGAGCAGTACGGGAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR GCA 90 bp CTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCACCAGGTCCACAAGCTaGCTCTTGGAGCACCATTCG +
Preference number: 4 (lower is better)
Translates to: LPTIITPKTCRQVSAPCVTRSTS*LLEHHS
Trigger: CGAATGGTGCTCCAAGAGGCAGCTTGTGGACCTGGT...GACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp AGATACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACGTGGGAGACCTGTCGCTGTCCAGCAGCTCCTaGCACACCCCTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: RYVADALAKVGEDVGDLSLSSSS*HTPSIT
Trigger: GGTGATGGAAGGGGTGTGGCAGGAGCTGCTGGACAG...CGACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR GCA 90 bp CGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAGAAATCACGGCTCACTaGAGCCTCAACCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RPRSSKPTTFRVGVMAITEITAH*SLNLLV
Trigger: GACCAGGAGGTTGAGGCTGCAGTGAGCCGTGATTTC...TGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCGCAGCCCTCAGGGTTTaGTCTAGCAGACCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTAALRV*SSRPED
Trigger: ATCTTCAGGTCTGCTAGAGCAAACCCTGAGGGCTGC...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACAACCAGGTCCACAAGCTaGCTCTTGGAGCACCATCTG +
Preference number: 4 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTTRSTS*LLEHHL
Trigger: CAGATGGTGCTCCAAGAGGCAGCTTGTGGACCTGGT...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGTTTCCCACTTTGTTCTaGGAGGCAGTCGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGFPTLF*EAVEGL
Trigger: GAGCCCCTCGACTGCCTCCCAGAACAAAGTGGGAAA...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp TTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCACCTTGTCTTCGTTGCTaGGCAGGCAGCGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: FLFIHIQKADPELVDAAAPCLRC*AGSVEP
Trigger: TGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAGG...TGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
CDS-3UTR CCA 90 bp CTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCACACAGATCTCAATCTaGGCGCTGTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPTIITPKTCRQVSAPCVTQISI*ALSSSS
Trigger: GGAGCTGCTGGACAGCGCCCAGATTGAGATCTGTGT...GACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GTTGATGGGGCGGGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCCTATACATCTCTCCTTaGCCTCTTGGAGTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VDGAGNEPLLQSRCQACCLYISP*PLGVPL
Trigger: CAAAGGGACTCCAAGAGGCCAAGGAGAGATGTATAG...GCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCCCGCCCCATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp TTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCATGGGCATCCACAAGGTaGTCAGGGGAGGTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: FLFIHIQKADPELVDAAAWASTR*SGEVSR
Trigger: ACGAGACACCTCCCCTGACCACCTTGTGGATGCCCA...TGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTCGGGAAAGGATGCTCTaGGGAAGAACCACAATGCAG +
Preference number: 4 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGRERML*GRTTMQ
Trigger: CTGCATTGTGGTTCTTCCCCAGAGCATCCTTTCCCG...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACACATCTGGACCACATTTaGAGACGTCCTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTHLDHI*RRPGLG
Trigger: TCCCAGGCCAGGACGTCTCCAAATGTGGTCCAGATG...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR CAA 72 bp CTGGACAGCCTTGTCTCTGTCACCCATTGCTTCCTGTaGGATCAGCCAATGGGATGCTCCGGCAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LDSLVSVTHCFL*DQPMGCSGRGW
Trigger: CCATCCCCTGCCGGAGCATCCCATTGGCTGATCCAACAGGAAGCAATGGGTGACAGAGACAAGGCTGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp AGACGTGGGAGACCTGTCGGCAGCCCCTCTCAGTCCACTGAAGGACCGGGTCAGGTGAGGCTGAGAACTTaGCCACTTCCTTTTCATACA +
Preference number: 4 (lower is better)
Translates to: RRGRPVGSPSQSTEGPGQVRLRT*PLPFHT
Trigger: TGTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCAC...CTGACCCGGTCCTTCAGTGGACTGAGAGGGGCTGCCGACAGGTCTCCCACGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR TCA 90 bp GTCTCTCCCGTACTGCTCAAAAGATACGTAGCGGATGCCCTTGCCAAAGTTGGTCCCCTCTCAGTCCACTaGAGGACCGGGTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: VSPVLLKRYVADALAKVGPLSVH*RTGSGE
Trigger: CTCACCTGACCCGGTCCTTCAGTGGACTGAGAGGGG...ACCAACTTTGGCAAGGGCATCCGCTACGTATCTTTTGAGCAGTACGGGAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR TCA 90 bp CGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAAGGCTGGTCTTGACTaGCAACGTCAGGCAGTAGTC +
Preference number: 4 (lower is better)
Translates to: RPRSSKPTTFRVGVMAITKAGLD*QRQAVV
Trigger: GACTACTGCCTGACGTTGTCAGTCAAGACCAGCCTT...TGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp ACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGACAGAGTCCTGGCGGGCTaGTCGGAGGCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: TAFRAESLEQRFTHIFIDRVLAG*SEAAAA
Trigger: CGCCGCTGCCGCCTCCGAGCAGCCCGCCAGGACTCT...GTCAATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp ACCAGAGATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTGCCGGTCGCGGGCCAGCTaGAGCAGCCACACAGTGGGC +
Preference number: 4 (lower is better)
Translates to: TRDFPKQQMTLLVSRTDCRSRAS*SSHTVG
Trigger: GCCCACTGTGTGGCTGCTGCAGCTGGCCCGCGACCG...GCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGCAAGTCTCTGCTCCCTaGGTCGGCAGAGGGATTTAT +
Preference number: 4 (lower is better)
Translates to: RVWSGKSGVSRPSELRALQVSAP*VGRGIY
Trigger: ATAAATCCCTCTGCCGACGCAGGGAGCAGAGACTTG...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp GTCCTTCTCAAGGGACTGCCTTGTCCCCCAAGGAAAAAGCAAATCTCCATGGCACATTCTCCACCCTGCTaGGGGCTCCAGGCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: VLLKGLPCPPRKKQISMAHSPPC*GLQAAD
Trigger: GTCAGCTGCCTGGAGCCCGCAGCAGGGTGGAGAATG...TGCCATGGAGATTTGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp TTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAACCAGGTCCACAAGCTaGCTCTTGGAGCACCATCTG +
Preference number: 4 (lower is better)
Translates to: FLFIHIQKADPELVDAAATRSTS*LLEHHL
Trigger: CAGATGGTGCTCCAAGAGGCAGCTTGTGGACCTGGT...TGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GTCCTTCTCAAGGGACTGCCTTGTCCCCCAAGGAAAAAGCAAATCTCCATGGCAAGCAGTCAGCCTCTATaGCCCCGTCACCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VLLKGLPCPPRKKQISMASSQPL*PRHPAS
Trigger: GCTGGCTGGGTGACGGGGGCATAGAGGCTGACTGCT...TGCCATGGAGATTTGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp CTGCTCAAAAGATACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACGTGGGAGCAGCAGCCACACAGTaGGCCCGTCCACTATGTCGC +
Preference number: 4 (lower is better)
Translates to: LLKRYVADALAKVGEDVGAAATQ*ARPLCR
Trigger: GCGACATAGTGGACGGGCCCACTGTGTGGCTGCTGC...TCCCACGTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTATCTTTTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGCCACAAGCTGCCTCTTaGAGCACCATTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RVWSGKSGVSRPSELRALPQAAS*STIRKR
Trigger: CCTCTTTCGAATGGTGCTCCAAGAGGCAGCTTGTGG...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGGTTTATGGCCAGATTTaGGGGCCTGTTCCCAACACC +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGVYGQI*GPVPNT
Trigger: GGTGTTGGGAACAGGCCCCCAAATCTGGCCATAAAC...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp TTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCATCTTGGAGCACCATCTaGGAAGGAGAGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FLFIHIQKADPELVDAAASWSTI*EGEMAG
Trigger: CCCTGCCATCTCTCCTTCCCAGATGGTGCTCCAAGA...TGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
CDS-3UTR CCA 90 bp TACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACGTGGGAGACCTGTCGGCACCACAAGCTGCCTCTTaGAGCACCATCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: YVADALAKVGEDVGDLSAPQAAS*STIWEG
Trigger: TCCTTCCCAGATGGTGCTCCAAGAGGCAGCTTGTGG...TGCCGACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp TTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCACATCTGGACCACATTTaGAGACGTCCTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FLFIHIQKADPELVDAAAHLDHI*RRPGLG
Trigger: TCCCAGGCCAGGACGTCTCCAAATGTGGTCCAGATG...TGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTTCATGGAAGGTGTGCTaGGAACCAGCCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSASWKVC*EPATWE
Trigger: CTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGA...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp CGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACACCTTTGTTTTGTGACTaGGTCCACCGAGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: RPRSSKPTTFRVGVMAITPLFCD*VHRDPC
Trigger: GCAAGGATCTCGGTGGACTCAGTCACAAAACAAAGG...TGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTTTGTGGGACAGGACATaGCTACAAATGAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGLWDRT*LQMKAT
Trigger: TGTGGCCTTCATTTGTAGTCATGTCCTGTCCCACAA...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTAGCCACTGCGTAGAGTaGGCGGCCCTCGGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: LTAFRAESLEQRFTHIFISHCVE*AALGAA
Trigger: CGCAGCGCCGAGGGCCGCGCACTCTACGCAGTGGCT...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp CTGCTCAAAAGATACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACGTGGGACTGTCCAGCAGCTCCTaGCACACCCCTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: LLKRYVADALAKVGEDVGLSSSS*HTPSIT
Trigger: GGTGATGGAAGGGGTGTGGCAGGAGCTGCTGGACAG...TCCCACGTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTATCTTTTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR GCA 90 bp GTCCTTCTCAAGGGACTGCCTTGTCCCCCAAGGAAAAAGCAAATCTCCATGGCACTGTCCAGCAGCTCCTaGCACACCCCTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: VLLKGLPCPPRKKQISMALSSSS*HTPSIT
Trigger: GGTGATGGAAGGGGTGTGGCAGGAGCTGCTGGACAG...TGCCATGGAGATTTGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGCAGATATTCGGACCTCTGCTCCCTaGCCACGATCATTACCCCCA +
Preference number: 4 (lower is better)
Translates to: PSGWGSWPSQTCHSAADIRTSAP*PRSLPP
Trigger: TGGGGGTAATGATCGTGGGCAGGGAGCAGAGGTCCG...AATATCTGCAGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGTCTCAAGGACAGACTaGCTCAGCGGACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSAVSRTD*LSGPLL
Trigger: GAGCAGAGGTCCGCTGAGGCAGTCTGTCCTTGAGAC...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACAGTCTCTGTCACCCATTaGTTCCTGTTGGATCAGCCA +
Preference number: 4 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTVSVTH*FLLDQP
Trigger: TGGCTGATCCAACAGGAAGCAATGGGTGACAGAGAC...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCCTGTTGCAGAGCCGCTaGCAAGCCTGCTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVLLQSR*QACCCS
Trigger: AGAGCAGCAGCAGGCTTGGCAGCGGCTCTGCAACAG...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GCTTCCTGTTGGATCAGCCAATGGGATGCTCCGGCAGGGGATGGAAGTGAAAGACCTCATCACAAAGGGTaGACAGTGACAGCCGCTACC +
Preference number: 4 (lower is better)
Translates to: ASCWISQWDAPAGDGSERPHHKG*TVTAAT
Trigger: GGTAGCGGCTGTCACTGTGCACCCTTTGTGATGAGG...TCTTTCACTTCCATCCCCTGCCGGAGCATCCCATTGGCTGATCCAACAGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTCCTTGTCTTCGTTGCTaGGCAGGCAGCGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSAPCLRC*AGSVEP
Trigger: TGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAGG...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGTTAGGTTCTTTTCTATaGCCCAGCCGTTCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGLGSFL*PSRSRH
Trigger: ATGGCGGGAACGGCTGGGCCATAGAAAAGAACCTAA...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGCAGCCTCAACCTCCTaGTCTCAGGCAATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSAAASTS*SQAILP
Trigger: TGGGAGGATTGCCTGAGACCAGGAGGTTGAGGCTGC...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GGGCCAGGTGTTCCTCGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGCTGAAATAAAGGGATaGGTCTGGCTAGTTATCTGC +
Preference number: 4 (lower is better)
Translates to: GPGVPRPRSSKPTTFRVGAEIKG*VWLVIC
Trigger: GCAGATAACTAGCCAGACCCATCCCTTTATTTCAGC...CCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCGAGGAACACCTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACAAAGGTCCTGCACATCTaGACCACATTTGGAGACGTC +
Preference number: 4 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTKVLHI*TTFGDV
Trigger: GACGTCTCCAAATGTGGTCCAGATGTGCAGGACCTT...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
3UTR CAA 72 bp AGATGCATGATGGGCTATACATCTCTCCTTGGCCTCTaGGAGTCCCTTTGCCATTCTCCACCCTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: RCMMGYTSLLGL*ESLCHSPPCCG
Trigger: CCCGCAGCAGGGTGGAGAATGGCAAAGGGACTCCAAGAGGCCAAGGAGAGATGTATAGCCCATCATGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp GACCTGAAGATGCATGATGGGCTATACATCTCTCCTTGGCCTCTTGGAGTCCCTGGGTGGTCCTGCGGTTaGTTCTGGAGGCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: DLKMHDGLYISPWPLGVPGWSCG*FWRLLG
Trigger: ACCCAAAAGCCTCCAGAATCAACCGCAGGACCACCC...AGGGACTCCAAGAGGCCAAGGAGAGATGTATAGCCCATCATGCATCTTCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GTCCTTCTCAAGGGACTGCCTTGTCCCCCAAGGAAAAAGCAAATCTCCATGGCACCTCCTTGTCTTCGTTaGTGGGCAGGCAGCGTTGAG +
Preference number: 4 (lower is better)
Translates to: VLLKGLPCPPRKKQISMAPPCLR*WAGSVE
Trigger: CTCAACGCTGCCTGCCCAGCAACGAAGACAAGGAGG...TGCCATGGAGATTTGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp TTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCATCCTTCTCAAGGGACTaGCTTGTCCCCCAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: FLFIHIQKADPELVDAAASFSRD*LVPQGK
Trigger: TTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGA...TGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CAGGCAGCTGACCTCTATGAAAGCCTGACCCTCATCTTTGTGGGACAGGACATGCTCTTGGAGTCCCTTTaGCATTCTCCACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QAADLYESLTLIFVGQDMLLESL*HSPPCC
Trigger: GCAGCAGGGTGGAGAATGGCAAAGGGACTCCAAGAG...CATGTCCTGTCCCACAAAGATGAGGGTCAGGCTTTCATAGAGGTCAGCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GTCTCTCCCGTACTGCTCAAAAGATACGTAGCGGATGCCCTTGCCAAAGTTGGTCCTTGTCTTCGTTGCTaGGCAGGCAGCGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VSPVLLKRYVADALAKVGPCLRC*AGSVEP
Trigger: TGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAGG...ACCAACTTTGGCAAGGGCATCCGCTACGTATCTTTTGAGCAGTACGGGAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp CAGGCAGCTGACCTCTATGAAAGCCTGACCCTCATCTTTGTGGGACAGGACATGCCACAAGCTGCCTCTTaGAGCACCATCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QAADLYESLTLIFVGQDMPQAAS*STIWEG
Trigger: TCCTTCCCAGATGGTGCTCCAAGAGGCAGCTTGTGG...CATGTCCTGTCCCACAAAGATGAGGGTCAGGCTTTCATAGAGGTCAGCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCCCCCTTCAGAGACCCTaGGCATCCACAAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVPLQRP*ASTRWS
Trigger: TGACCACCTTGTGGATGCCCAGGGTCTCTGAAGGGG...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp CCCGTACTGCTCAAAAGATACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACCCTTGCCAAAGTTGGTaGAGACGTGGGAGACCTGTC +
Preference number: 4 (lower is better)
Translates to: PVLLKRYVADALAKVGEDPCQSW*RRGRPV
Trigger: GACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGG...GTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTATCTTTTGAGCAGTACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR TCA 90 bp CGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAATAAAGGGATGGGCTaGAATAAAGGGATGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RPRSSKPTTFRVGVMAITNKGMG*NKGMGL
Trigger: CAGACCCATCCCTTTATTTCAGCCCATCCCTTTATT...TGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp ATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGGGACATGACTACAAATaGAGGCCACATACTAGACAT +
Preference number: 4 (lower is better)
Translates to: IHIQKADPELVDAAAVLSGHDYK*RPHTRH
Trigger: ATGTCTAGTATGTGGCCTTCATTTGTAGTCATGTCC...CGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp CTAACTGTTACTAGCTCAGGGGCTCCTGCCTACAACTTTGTAAACAGTCCTTCTACAAAGGGTGCACAGTaGCAGCCGCTACCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LTVTSSGAPAYNFVNSPSTKGAQ*QPLPVG
Trigger: CCCCACGGGTAGCGGCTGTCACTGTGCACCCTTTGT...AGAAGGACTGTTTACAAAGTTGTAGGCAGGAGCCCCTGAGCTAGTAACAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGCAGCGTTGAGCCACTaGGTAGAGTGCGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LTAFRAESLEQRFTHIFIAALSH*VECAAL
Trigger: GAGGGCCGCGCACTCTACGCAGTGGCTCAACGCTGC...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTGTCCACCGAGATCCTTaGAGGAGAAGAAAATTTGCA +
Preference number: 4 (lower is better)
Translates to: PAHDHYPQNMPASLCSLRVHRDP*RRRKFA
Trigger: TGCAAATTTTCTTCTCCTGCAAGGATCTCGGTGGAC...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTATTACCCCCAAAACATaGCGGCAAGTCTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSAITPKT*RQVSAP
Trigger: GGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAAT...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp CTAACTGTTACTAGCTCAGGGGCTCCTGCCTACAACTTTGTAAACAGTCCTTCTTGCCATTCTCCACCCTaGTGCGGGCTCCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LTVTSSGAPAYNFVNSPSCHSPP*CGLQAA
Trigger: AGCTGCCTGGAGCCCGCAGCAGGGTGGAGAATGGCA...AGAAGGACTGTTTACAAAGTTGTAGGCAGGAGCCCCTGAGCTAGTAACAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCCTCTTGGAGTCCCTTTaGCATTCTCCACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVLLESL*HSPPCC
Trigger: GCAGCAGGGTGGAGAATGGCAAAGGGACTCCAAGAG...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTGAGCGTGGCGGCACGTaGCTCAGCACCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVERGGT*LSTCTS
Trigger: GCTGGTGCAGGTGCTGAGCCACGTGCCGCCACGCTC...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTCCAGGCGCGGCACACTaGGCGGCATCGCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVPGAAH*AASRDQ
Trigger: TTGGTCACGCGATGCCGCCCAGTGTGCCGCGCCTGG...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp AGATACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACGTGGGAGACCTGTCGTTAGGTTCTTTTCTATaGCCCAGCCGTTCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: RYVADALAKVGEDVGDLSLGSFL*PSRSRH
Trigger: ATGGCGGGAACGGCTGGGCCATAGAAAAGAACCTAA...CGACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp CTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCGCTGAAATAAAGGGATaGGTCTGGCTAGTTATCTGC +
Preference number: 4 (lower is better)
Translates to: LPTIITPKTCRQVSAPCVAEIKG*VWLVIC
Trigger: GCAGATAACTAGCCAGACCCATCCCTTTATTTCAGC...GACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp CCCGTACTGCTCAAAAGATACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACTCTTGGAGCACCATCTaGGAAGGAGAGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PVLLKRYVADALAKVGEDSWSTI*EGEMAG
Trigger: CCCTGCCATCTCTCCTTCCCAGATGGTGCTCCAAGA...GTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTATCTTTTGAGCAGTACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CCA 90 bp GTCCTTCTCAAGGGACTGCCTTGTCCCCCAAGGAAAAAGCAAATCTCCATGGCATCTTGGAGCACCATCTaGGAAGGAGAGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VLLKGLPCPPRKKQISMASWSTI*EGEMAG
Trigger: CCCTGCCATCTCTCCTTCCCAGATGGTGCTCCAAGA...TGCCATGGAGATTTGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp CAGGCAGCTGACCTCTATGAAAGCCTGACCCTCATCTTTGTGGGACAGGACATGCGGGAAAGGATGCTCTaGGGAAGAACCACAATGCAG +
Preference number: 4 (lower is better)
Translates to: QAADLYESLTLIFVGQDMRERML*GRTTMQ
Trigger: CTGCATTGTGGTTCTTCCCCAGAGCATCCTTTCCCG...CATGTCCTGTCCCACAAAGATGAGGGTCAGGCTTTCATAGAGGTCAGCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp CTAACTGTTACTAGCTCAGGGGCTCCTGCCTACAACTTTGTAAACAGTCCTTCTGGAGACGTCCTGGCCTaGGAACCTCTAGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LTVTSSGAPAYNFVNSPSGDVLA*EPLGEE
Trigger: CTCCTCCCCTAGAGGTTCCCAGGCCAGGACGTCTCC...AGAAGGACTGTTTACAAAGTTGTAGGCAGGAGCCCCTGAGCTAGTAACAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp ACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGACCCCCTCTCAGTCCACTaGAGGACCGGGTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TAFRAESLEQRFTHIFIDPLSVH*RTGSGE
Trigger: CTCACCTGACCCGGTCCTTCAGTGGACTGAGAGGGG...GTCAATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTTCATGGAAGGTGTGCTaGGAACCAGCCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFSWKVC*EPATWE
Trigger: CTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGA...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp CAGAAGGGAAACCGAGCAGACGAGAGGCTGGGCGTGTGTGCCTTTAGCGGGTCGTCAATCAGTGTTTGTTaGACATTAAGGGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: QKGNRADERLGVCAFSGSSISVC*TLRGFA
Trigger: AGCAAAACCCCTTAATGTTCAACAAACACTGATTGA...CGACCCGCTAAAGGCACACACGCCCAGCCTCTCGTCTGCTCGGTTTCCCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR GCA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTGCAGCGTTGAGCCACTaGGTAGAGTGCGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVAALSH*VECAAL
Trigger: GAGGGCCGCGCACTCTACGCAGTGGCTCAACGCTGC...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp GACCTGAAGATGCATGATGGGCTATACATCTCTCCTTGGCCTCTTGGAGTCCCTTGGAATAGAACAAAGTaGCAGGAACCGGCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: DLKMHDGLYISPWPLGVPWNRTK*QEPAER
Trigger: GCGCTCAGCCGGTTCCTGGCACTTTGTTCTATTCCA...AGGGACTCCAAGAGGCCAAGGAGAGATGTATAGCCCATCATGCATCTTCAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTAGCGGTTTTCCGCCCTaGGTGGGCCAGGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LTAFRAESLEQRFTHIFISGFPP*VGQVFL
Trigger: GAGGAACACCTGGCCCACCCAGGGCGGAAAACCGCT...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCCTCTCCTTGGCCTCTTaGAGTCCCTTTGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVLSLAS*SPFAIL
Trigger: GAGAATGGCAAAGGGACTCCAAGAGGCCAAGGAGAG...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTCCCCTCTCAGTCCACTaGAGGACCGGGTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVPLSVH*RTGSGE
Trigger: CTCACCTGACCCGGTCCTTCAGTGGACTGAGAGGGG...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp CTTAGCTGTTATGATTATAGATATCCAGGAGTGACAGAAGGGAAACCGAGCAGACCCCTCTCAGTCCACTaGAGGACCGGGTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LSCYDYRYPGVTEGKPSRPLSVH*RTGSGE
Trigger: CTCACCTGACCCGGTCCTTCAGTGGACTGAGAGGGG...TCTGCTCGGTTTCCCTTCTGTCACTCCTGGATATCTATAATCATAACAGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR TCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTAGGACAGACGGATCCTaGCCCTCACACTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LTAFRAESLEQRFTHIFIRTDGS*PSHWSG
Trigger: CCCACTCCAGTGTGAGGGTCAGGATCCGTCTGTCCT...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp CGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACATACCCACATATTTATTaGCAGCAAGCCAGTGATAAG +
Preference number: 4 (lower is better)
Translates to: RPRSSKPTTFRVGVMAITYPHIY*QQASDK
Trigger: CTTATCACTGGCTTGCTGTCAATAAATATGTGGGTA...TGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp TTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGGACATGACTACAAATaGAGGCCACATACTAGACAT +
Preference number: 4 (lower is better)
Translates to: FLFIHIQKADPELVDAAAGHDYK*RPHTRH
Trigger: ATGTCTAGTATGTGGCCTTCATTTGTAGTCATGTCC...TGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTACCAGGTCCACAAGCTaGCTCTTGGAGCACCATTCG +
Preference number: 4 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFTRSTS*LLEHHS
Trigger: CGAATGGTGCTCCAAGAGGCAGCTTGTGGACCTGGT...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGCCTCAGCGGACCTCTaGTCCCTGCCCACGATCATT +
Preference number: 4 (lower is better)
Translates to: LTAFRAESLEQRFTHIFIASADL*SLPTII
Trigger: AATGATCGTGGGCAGGGAGCAGAGGTCCGCTGAGGC...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTTTTCCCACTTTGTTCTaGGAGGCAGTCGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFFPTLF*EAVEGL
Trigger: GAGCCCCTCGACTGCCTCCCAGAACAAAGTGGGAAA...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR CAA 72 bp CCCAACACCAGAGATTTCCCCAAACAGCAGATGACTTaGTTAGTCTCAAGGACAGACTGCCTCAGCGGACCT +
Preference number: 4 (lower is better)
Translates to: PNTRDFPKQQMT*LVSRTDCLSGP
Trigger: AGGTCCGCTGAGGCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGTGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp AGGGCTTGGGATGTAAGAAGGGCTCGATACTTCTTAGCTGTTATGATTATAGATCCCCTCTCAGTCCACTaGAGGACCGGGTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RAWDVRRARYFLAVMIIDPLSVH*RTGSGE
Trigger: CTCACCTGACCCGGTCCTTCAGTGGACTGAGAGGGG...ATCTATAATCATAACAGCTAAGAAGTATCGAGCCCTTCTTACATCCCAAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR TCA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTAGGACAGACGGATCCTaGCCCTCACACTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVRTDGS*PSHWSG
Trigger: CCCACTCCAGTGTGAGGGTCAGGATCCGTCTGTCCT...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCTTGTGGGACAGGACATaGCTACAAATGAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVLWDRT*LQMKAT
Trigger: TGTGGCCTTCATTTGTAGTCATGTCCTGTCCCACAA...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp ACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGACCCTCCTTGTCTTCGTTaGTGGGCAGGCAGCGTTGAG +
Preference number: 4 (lower is better)
Translates to: TAFRAESLEQRFTHIFIDPPCLR*WAGSVE
Trigger: CTCAACGCTGCCTGCCCAGCAACGAAGACAAGGAGG...GTCAATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTCTGTCCAGCAGCTCCTaGCACACCCCTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVLSSSS*HTPSIT
Trigger: GGTGATGGAAGGGGTGTGGCAGGAGCTGCTGGACAG...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGGCACAGATCACTTATaGTATGGTTTGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSAGTDHL*YGLWFR
Trigger: CCTGAACCACAAACCATAGCATAAGTGATCTGTGCC...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTCTTTCTCACCCAGGCTaGAGTGGTGGTGAAATCACG +
Preference number: 4 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFLSHPG*SGGEIT
Trigger: CGTGATTTCACCACCACTCCAGCCTGGGTGAGAAAG...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTCTGACACTCCCCTTCTaGGGGGCTGAGGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVLTLPF*GAEEAV
Trigger: CACAGCTTCCTCAGCCCCCCAGAAGGGGAGTGTCAG...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GTCCTTCTCAAGGGACTGCCTTGTCCCCCAAGGAAAAAGCAAATCTCCATGGCACTATACATCTCTCCTTaGCCTCTTGGAGTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VLLKGLPCPPRKKQISMALYISP*PLGVPL
Trigger: CAAAGGGACTCCAAGAGGCCAAGGAGAGATGTATAG...TGCCATGGAGATTTGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCGTGAGGCTGAGAACTTaGCCACTTCCTTTTCATACA +
Preference number: 4 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVVRLRT*PLPFHT
Trigger: TGTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCAC...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTCCTTGCCAAAGTTGGTaGAGACGTGGGAGACCTGTC +
Preference number: 4 (lower is better)
Translates to: LTAFRAESLEQRFTHIFIPCQSW*RRGRPV
Trigger: GACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGG...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp ACCAGAGATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTGCCAAGTCTCTGCTCCCTaGGTCGGCAGAGGGATTTAT +
Preference number: 4 (lower is better)
Translates to: TRDFPKQQMTLLVSRTDCQVSAP*VGRGIY
Trigger: ATAAATCCCTCTGCCGACGCAGGGAGCAGAGACTTG...GCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp ACCAGAGATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTGCATTACCCCCAAAACATaGCGGCAAGTCTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TRDFPKQQMTLLVSRTDCITPKT*RQVSAP
Trigger: GGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAAT...GCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp TATGTAAGCGTCTTGACACAGGGCTTGGGATGTAAGAAGGGCTCGATACTTCTTCCACAAGCTGCCTCTTaGAGCACCATTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: YVSVLTQGLGCKKGSILLPQAAS*STIRKR
Trigger: CCTCTTTCGAATGGTGCTCCAAGAGGCAGCTTGTGG...AAGAAGTATCGAGCCCTTCTTACATCCCAAGCCCTGTGTCAAGACGCTTACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTACACAGATCTCAATCTaGGCGCTGTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LTAFRAESLEQRFTHIFITQISI*ALSSSS
Trigger: GGAGCTGCTGGACAGCGCCCAGATTGAGATCTGTGT...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GTCCTTCTCAAGGGACTGCCTTGTCCCCCAAGGAAAAAGCAAATCTCCATGGCAAGAACCTGGGTGTTTTaGGAAGAAGGCATTCATCCT +
Preference number: 4 (lower is better)
Translates to: VLLKGLPCPPRKKQISMARTWVF*EEGIHP
Trigger: AGGATGAATGCCTTCTTCCCAAAACACCCAGGTTCT...TGCCATGGAGATTTGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCAGAACCTGGGTGTTTTaGGAAGAAGGCATTCATCCT +
Preference number: 4 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVRTWVF*EEGIHP
Trigger: AGGATGAATGCCTTCTTCCCAAAACACCCAGGTTCT...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp GACCTGAAGATGCATGATGGGCTATACATCTCTCCTTGGCCTCTTGGAGTCCCTAGACCAGATTTTCTATaGAAGAGCCACAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: DLKMHDGLYISPWPLGVPRPDFL*KSHSLK
Trigger: CTTCAGGCTGTGGCTCTTCCATAGAAAATCTGGTCT...AGGGACTCCAAGAGGCCAAGGAGAGATGTATAGCCCATCATGCATCTTCAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR TCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTAAGGCTGGTCTTGACTaGCAACGTCAGGCAGTAGTC +
Preference number: 4 (lower is better)
Translates to: LTAFRAESLEQRFTHIFIKAGLD*QRQAVV
Trigger: GACTACTGCCTGACGTTGTCAGTCAAGACCAGCCTT...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp CTAACTGTTACTAGCTCAGGGGCTCCTGCCTACAACTTTGTAAACAGTCCTTCTACCTCTATGAAAGCCTaGCCCTCATCTTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LTVTSSGAPAYNFVNSPSTSMKA*PSSLWD
Trigger: GTCCCACAAAGATGAGGGTCAGGCTTTCATAGAGGT...AGAAGGACTGTTTACAAAGTTGTAGGCAGGAGCCCCTGAGCTAGTAACAGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR GCA 90 bp CACAGGGCTTGGGATGTAAGAAGGGCTCGATACTTCTTAGCTGTTATGATTATAACCAGGTCCACAAGCTaGCTCTTGGAGCACCATTCG +
Preference number: 4 (lower is better)
Translates to: HRAWDVRRARYFLAVMIITRSTS*LLEHHS
Trigger: CGAATGGTGCTCCAAGAGGCAGCTTGTGGACCTGGT...TATAATCATAACAGCTAAGAAGTATCGAGCCCTTCTTACATCCCAAGCCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR GCA 90 bp TGGGATGTAAGAAGGGCTCGATACTTCTTAGCTGTTATGATTATAGATATCCAGCTGTCCAGCAGCTCCTaGCACACCCCTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: WDVRRARYFLAVMIIDIQLSSSS*HTPSIT
Trigger: GGTGATGGAAGGGGTGTGGCAGGAGCTGCTGGACAG...CTGGATATCTATAATCATAACAGCTAAGAAGTATCGAGCCCTTCTTACATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CCA 90 bp CTAACTGTTACTAGCTCAGGGGCTCCTGCCTACAACTTTGTAAACAGTCCTTCTTTAGGTTCTTTTCTATaGCCCAGCCGTTCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: LTVTSSGAPAYNFVNSPSLGSFL*PSRSRH
Trigger: ATGGCGGGAACGGCTGGGCCATAGAAAAGAACCTAA...AGAAGGACTGTTTACAAAGTTGTAGGCAGGAGCCCCTGAGCTAGTAACAGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CCA 90 bp CTTAGCTGTTATGATTATAGATATCCAGGAGTGACAGAAGGGAAACCGAGCAGAACACAGATCTCAATCTaGGCGCTGTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSCYDYRYPGVTEGKPSRTQISI*ALSSSS
Trigger: GGAGCTGCTGGACAGCGCCCAGATTGAGATCTGTGT...TCTGCTCGGTTTCCCTTCTGTCACTCCTGGATATCTATAATCATAACAGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CCA 90 bp CCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGCAGATATTAGATCACTTATGCTATaGTTTGTGGTTCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: PSGWGSWPSQTCHSAADIRSLML*FVVQEP
Trigger: GGGTTCCTGAACCACAAACCATAGCATAAGTGATCT...AATATCTGCAGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp ATACTTCTTAGCTGTTATGATTATAGATATCCAGGAGTGACAGAAGGGAAACCGAGCTGGAAGCTAGTCTaGACCCACCTGTCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ILLSCYDYRYPGVTEGKPSWKLV*THLSAA
Trigger: GGCTGCCGACAGGTGGGTCCAGACTAGCTTCCAGCT...CGGTTTCCCTTCTGTCACTCCTGGATATCTATAATCATAACAGCTAAGAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CCA 90 bp AAGGGCTCGATACTTCTTAGCTGTTATGATTATAGATATCCAGGAGTGACAGAAAGCTGGAAGCTAGTCTaGACCCACCTGTCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KGSILLSCYDYRYPGVTESWKLV*THLSAA
Trigger: GGCTGCCGACAGGTGGGTCCAGACTAGCTTCCAGCT...TTCTGTCACTCCTGGATATCTATAATCATAACAGCTAAGAAGTATCGAGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CCA 90 bp GGATGTAAGAAGGGCTCGATACTTCTTAGCTGTTATGATTATAGATATCCAGGAGAGCAGACGAGAGGCTaGGCGTGTGTGCCTTTAGCG +
Preference number: 4 (lower is better)
Translates to: GCKKGSILLSCYDYRYPGEQTRG*ACVPLA
Trigger: CGCTAAAGGCACACACGCCCAGCCTCTCGTCTGCTC...TCCTGGATATCTATAATCATAACAGCTAAGAAGTATCGAGCCCTTCTTACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR TCA 90 bp ACCAGAGATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTGCTTAGCCTTTGTTTTGTaGCTGAGTCCACCGAGATCC +
Preference number: 4 (lower is better)
Translates to: TRDFPKQQMTLLVSRTDCLAFVL*LSPPRS
Trigger: GGATCTCGGTGGACTCAGTCACAAAACAAAGGCTAA...GCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp TATGTAAGCGTCTTGACACAGGGCTTGGGATGTAAGAAGGGCTCGATACTTCTTATAGATATCCAGGAGTaGCAGAAGGGAAACCGAGCA +
Preference number: 4 (lower is better)
Translates to: YVSVLTQGLGCKKGSILLIDIQE*QKGNRA
Trigger: TGCTCGGTTTCCCTTCTGTCACTCCTGGATATCTAT...AAGAAGTATCGAGCCCTTCTTACATCCCAAGCCCTGTGTCAAGACGCTTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR GCA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTGTCCACCGAGATCCTTaGAGGAGAAGAAAATTTGCA +
Preference number: 4 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFVHRDP*RRRKFA
Trigger: TGCAAATTTTCTTCTCCTGCAAGGATCTCGGTGGAC...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp ACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGACTTAGGTTCTTTTCTATaGCCCAGCCGTTCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: TAFRAESLEQRFTHIFIDLGSFL*PSRSRH
Trigger: ATGGCGGGAACGGCTGGGCCATAGAAAAGAACCTAA...GTCAATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp ACCAGAGATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTGCGTGAGGCTGAGAACTTaGCCACTTCCTTTTCATACA +
Preference number: 4 (lower is better)
Translates to: TRDFPKQQMTLLVSRTDCVRLRT*PLPFHT
Trigger: TGTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCAC...GCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR GCA 90 bp AAGGGCTCGATACTTCTTAGCTGTTATGATTATAGATATCCAGGAGTGACAGAAACCAGGTCCACAAGCTaGCTCTTGGAGCACCATTCG +
Preference number: 4 (lower is better)
Translates to: KGSILLSCYDYRYPGVTETRSTS*LLEHHS
Trigger: CGAATGGTGCTCCAAGAGGCAGCTTGTGGACCTGGT...TTCTGTCACTCCTGGATATCTATAATCATAACAGCTAAGAAGTATCGAGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CCA 90 bp TGGGATGTAAGAAGGGCTCGATACTTCTTAGCTGTTATGATTATAGATATCCAGACACAGATCTCAATCTaGGCGCTGTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WDVRRARYFLAVMIIDIQTQISI*ALSSSS
Trigger: GGAGCTGCTGGACAGCGCCCAGATTGAGATCTGTGT...CTGGATATCTATAATCATAACAGCTAAGAAGTATCGAGCCCTTCTTACATCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR TCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGTGAGGCTGAGAACTTaGCCACTTCCTTTTCATACA +
Preference number: 4 (lower is better)
Translates to: LTAFRAESLEQRFTHIFIVRLRT*PLPFHT
Trigger: TGTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCAC...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTTTAGCCTTTGTTTTGTaGCTGAGTCCACCGAGATCC +
Preference number: 4 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVLAFVL*LSPPRS
Trigger: GGATCTCGGTGGACTCAGTCACAAAACAAAGGCTAA...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp CTTAGCTGTTATGATTATAGATATCCAGGAGTGACAGAAGGGAAACCGAGCAGAATAGATATCCAGGAGTaGCAGAAGGGAAACCGAGCA +
Preference number: 4 (lower is better)
Translates to: LSCYDYRYPGVTEGKPSRIDIQE*QKGNRA
Trigger: TGCTCGGTTTCCCTTCTGTCACTCCTGGATATCTAT...TCTGCTCGGTTTCCCTTCTGTCACTCCTGGATATCTATAATCATAACAGCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR GCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGGCACAGATCACTTATaGTATGGTTTGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LTAFRAESLEQRFTHIFIGTDHL*YGLWFR
Trigger: CCTGAACCACAAACCATAGCATAAGTGATCTGTGCC...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp GGATGTAAGAAGGGCTCGATACTTCTTAGCTGTTATGATTATAGATATCCAGGACCACAAGCTGCCTCTTaGAGCACCATTCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GCKKGSILLSCYDYRYPGPQAAS*STIRKR
Trigger: CCTCTTTCGAATGGTGCTCCAAGAGGCAGCTTGTGG...TCCTGGATATCTATAATCATAACAGCTAAGAAGTATCGAGCCCTTCTTACATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
3UTR CAA 72 bp GAAATGAATCGATATGTAAGCGTCTTGACACAGGGCTaGGGATGTAAGAAGGGCTCGATACTTCTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: EMNRYVSVLTQG*GCKKGSILLSC
Trigger: ACAGCTAAGAAGTATCGAGCCCTTCTTACATCCCAAGCCCTGTGTCAAGACGCTTACATATCGATTCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR TCA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTAATAAAGGGATGGGCTaGAATAAAGGGATGGGTCTG +
Preference number: 4 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVNKGMG*NKGMGL
Trigger: CAGACCCATCCCTTTATTTCAGCCCATCCCTTTATT...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CCA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTAGATCACTTATGCTATaGTTTGTGGTTCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: LTAFRAESLEQRFTHIFIRSLML*FVVQEP
Trigger: GGGTTCCTGAACCACAAACCATAGCATAAGTGATCT...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
3UTR CAA 72 bp GGTTTTGCTAATGAAATGAATCGATATGTAAGCGTCTaGACACAGGGCTTGGGATGTAAGAAGGGCTCGATA +
Preference number: 4 (lower is better)
Translates to: GFANEMNRYVSV*TQGLGCKKGSI
Trigger: TATCGAGCCCTTCTTACATCCCAAGCCCTGTGTCAAGACGCTTACATATCGATTCATTTCATTAGCAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR TCA 90 bp TTAAGGGGTTTTGCTAATGAAATGAATCGATATGTAAGCGTCTTGACACAGGGCGTGAGGCTGAGAACTTaGCCACTTCCTTTTCATACA +
Preference number: 4 (lower is better)
Translates to: LRGFANEMNRYVSVLTQGVRLRT*PLPFHT
Trigger: TGTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCAC...GCCCTGTGTCAAGACGCTTACATATCGATTCATTTCATTAGCAAAACCCCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR TCA 90 bp ATACTTCTTAGCTGTTATGATTATAGATATCCAGGAGTGACAGAAGGGAAACCGGTGAGGCTGAGAACTTaGCCACTTCCTTTTCATACA +
Preference number: 4 (lower is better)
Translates to: ILLSCYDYRYPGVTEGKPVRLRT*PLPFHT
Trigger: TGTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCAC...CGGTTTCCCTTCTGTCACTCCTGGATATCTATAATCATAACAGCTAAGAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR TCA 90 bp ACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGACAAATTTGCAGGCAAATaGACTAAATGTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TAFRAESLEQRFTHIFIDKFAGK*TKCLFL
Trigger: CAGGAAGAGACATTTAGTTCATTTGCCTGCAAATTT...GTCAATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR TCA 90 bp TTAAGGGGTTTTGCTAATGAAATGAATCGATATGTAAGCGTCTTGACACAGGGCTCAATCAGTGTTTGTTaGACATTAAGGGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LRGFANEMNRYVSVLTQGSISVC*TLRGFA
Trigger: AGCAAAACCCCTTAATGTTCAACAAACACTGATTGA...GCCCTGTGTCAAGACGCTTACATATCGATTCATTTCATTAGCAAAACCCCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS CCA 90 bp CGGAGGCGGCAGCGGCGGGCTAAGCTTCCCTTTCCCACTTTGTTCTaGGAGGCAGTCGAGGGGCTCCCCGTGATCGGCGTGGCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: RRRQRRAKLPFPTLF*EAVEGLPVIGVAQG
Trigger: CCCCTGGGCCACGCCGATCACGGGGAGCCCCTCGACTGCCTCCCAGAACAAAGTGGGAAAGGGAAGCTTAGCCCGCCGCTGCCGCCTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292852.9
ENST00000596025.5
ENST00000634720.1
ENST00000634982.2
CDS GCA 90 bp GAACTCCTCCTTGTCTTCGTTGCTGGGCAGGCAGCGTTGAGCCACTaGGTAGAGTGCGCGGCCCTCGGCGCTGCGGTCGCGGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: ELLLVFVAGQAALSH*VECAALGAAVAGQL
Trigger: CAGCTGGCCCGCGACCGCAGCGCCGAGGGCCGCGCACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAGGAGGAGTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292852.9
ENST00000595329.5
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000634982.2
ENST00000635016.1
ENST00000635115.1
CDS CCA 90 bp AGCGCGCCAGGGCGCACAGCGGGAACTCCTCCTTGTCTTCGTTGCTaGGCAGGCAGCGTTGAGCCACTGCGTAGAGTGCGCGGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: SAPGRTAGTPPCLRC*AGSVEPLRRVRGPR
Trigger: CCGAGGGCCGCGCACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAGGAGGAGTTCCCGCTGTGCGCCCTGGCGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292852.9
ENST00000595329.5
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000634982.2
ENST00000635016.1
ENST00000635115.1
CDS-3UTR CAA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCCCGCTACCCGTGGGGTaGATGGGGCGGGAAATGAGC +
Preference number: 5 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGPLPVG*MGREMS
Trigger: GCTCATTTCCCGCCCCATCAACCCCACGGGTAGCGG...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp CCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCCACGCTGGGCAGGCAGCGTaGAGCCACTGCGTAGAGTGC +
Preference number: 5 (lower is better)
Translates to: PELVDAAAVLSSAPPVSHAGQAA*SHCVEC
Trigger: GCACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGC...GTGGCTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CAA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCGGAAATGAGCCCCTGTaGCAGAGCCGCTGCCAAGCC +
Preference number: 5 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGGNEPL*QSRCQA
Trigger: GGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCC...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS GCA 90 bp AGTAGCGCGCCAGGGCGCACAGCGGGAACTCCTCCTTGTCTTCGTTaGTGGGCAGGCAGCGTTGAGCCACTGCGTAGAGTGCGCGGCCCT +
Preference number: 5 (lower is better)
Translates to: SSAPGRTAGTPPCLR*WAGSVEPLRRVRGP
Trigger: AGGGCCGCGCACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAGGAGGAGTTCCCGCTGTGCGCCCTGGCGCGCTACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292852.9
ENST00000595329.5
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000634982.2
ENST00000635016.1
ENST00000635115.1
CDS-3UTR CAA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCAGCGGGAACTCCTCCTaGTCTTCGTTGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGSGNSS*SSLLGR
Trigger: CCTGCCCAGCAACGAAGACAAGGAGGAGTTCCCGCT...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCCACACAGCTGGGCAGGCAGCGTaGAGCCACTGCGTAGAGTGC +
Preference number: 5 (lower is better)
Translates to: ELVDAAAVLSSAPPVSHTAGQAA*SHCVEC
Trigger: GCACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGC...TGTGTGGCTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CAA 90 bp CCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCCACAGCGGGAACTCCTCCTaGTCTTCGTTGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PELVDAAAVLSSAPPVSHSGNSS*SSLLGR
Trigger: CCTGCCCAGCAACGAAGACAAGGAGGAGTTCCCGCT...GTGGCTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CAA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCCCTCTTGGAGTCCCTTaGCCATTCTCCACCCTGCTG +
Preference number: 5 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGPLGVP*PFSTLL
Trigger: CAGCAGGGTGGAGAATGGCAAAGGGACTCCAAGAGG...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GGTGAAGACGTGGGAGACCTGTCGGCAGCCCCTCTCAGTCCACTGAAGGACCGGGAGTTGAAGATGAGATaGCGGCCGAAGGGCGCGCGC +
Preference number: 5 (lower is better)
Translates to: GEDVGDLSAAPLSPLKDRELKMR*RPKGAR
Trigger: GCGCGCGCCCTTCGGCCGCAATCTCATCTTCAACTC...CCGGTCCTTCAGTGGACTGAGAGGGGCTGCCGACAGGTCTCCCACGTCTTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CAA 90 bp GTTGATGGGGCGGGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCGAGTTGAAGATGAGATaGCGGCCGAAGGGCGCGCGC +
Preference number: 5 (lower is better)
Translates to: VDGAGNEPLLQSRCQACCELKMR*RPKGAR
Trigger: GCGCGCGCCCTTCGGCCGCAATCTCATCTTCAACTC...GCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCCCGCCCCATCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCTGCTCTCCGCAGGAGTaGAAGATGAGATTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: DPELVDAAAVLSSAPPVSCSPQE*KMRLRP
Trigger: CGGCCGCAATCTCATCTTCAACTCCTGCGGAGAGCA...GCTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CAA 90 bp CCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCCACTCCACAAGCTGCCTCTaGGAGCACCATCTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: PELVDAAAVLSSAPPVSHSTSCL*EHHLGR
Trigger: CCTTCCCAGATGGTGCTCCAAGAGGCAGCTTGTGGA...GTGGCTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CAA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCTGGGTGGTCCTGCGGTaGATTCTGGAGGCTTTTGGG +
Preference number: 5 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVWVVLR*ILEAFG
Trigger: CCCAAAAGCCTCCAGAATCAACCGCAGGACCACCCA...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTGAGTTGAAGATGAGATaGCGGCCGAAGGGCGCGCGC +
Preference number: 5 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGELKMR*RPKGAR
Trigger: GCGCGCGCCCTTCGGCCGCAATCTCATCTTCAACTC...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GGTGAAGACGTGGGAGACCTGTCGGCAGCCCCTCTCAGTCCACTGAAGGACCGGTGCTCTCCGCAGGAGTaGAAGATGAGATTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: GEDVGDLSAAPLSPLKDRCSPQE*KMRLRP
Trigger: CGGCCGCAATCTCATCTTCAACTCCTGCGGAGAGCA...CCGGTCCTTCAGTGGACTGAGAGGGGCTGCCGACAGGTCTCCCACGTCTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CAA 90 bp GGGCCAGGTGTTCCTCGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGTTGCCCAGGCTGGTCTaGAACTCCCGAGCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: GPGVPRPRSSKPTTFRVGLPRLV*NSRAPV
Trigger: CACTGGAGCTCGGGAGTTCAAGACCAGCCTGGGCAA...CCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCGAGGAACACCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCACCCATTGCTTCCTGTaGGATCAGCCAATGGGATGC +
Preference number: 5 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVTHCFL*DQPMGC
Trigger: GCATCCCATTGGCTGATCCAACAGGAAGCAATGGGT...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCTCTCTCCTTGGCCTCTaGGAGTCCCTTTGCCATTCT +
Preference number: 5 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVSLLGL*ESLCHS
Trigger: AGAATGGCAAAGGGACTCCAAGAGGCCAAGGAGAGA...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GTTGATGGGGCGGGAAATGAGCCCCTGTTGCAGAGCCGCTGCCAAGCCTGCTGCTCCACAAGCTGCCTCTaGGAGCACCATCTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: VDGAGNEPLLQSRCQACCSTSCL*EHHLGR
Trigger: CCTTCCCAGATGGTGCTCCAAGAGGCAGCTTGTGGA...GCAGCAGGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCCCGCCCCATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp CAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAGGCCAGAACCTGGGTGTTTaGGGAAGAAGGCATTCATCC +
Preference number: 5 (lower is better)
Translates to: QPLCPRHPASSLGFGAGGQNLGV*GRRHSS
Trigger: GGATGAATGCCTTCTTCCCAAAACACCCAGGTTCTG...GCCTCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp AGTCAGCCTCTATGCCCCCGTCACCCAGCCAGCTCTCTGGGTTTCGGGGCGGGAAGGGCTGGCTCCATCTaGATGAAGGTCCTGCACATC +
Preference number: 5 (lower is better)
Translates to: SQPLCPRHPASSLGFGAGRAGSI*MKVLHI
Trigger: GATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCT...TCCCGCCCCGAAACCCAGAGAGCTGGCTGGGTGACGGGGGCATAGAGGCTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp CTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCGAGTTGAAGATGAGATaGCGGCCGAAGGGCGCGCGC +
Preference number: 5 (lower is better)
Translates to: LPTIITPKTCRQVSAPCVELKMR*RPKGAR
Trigger: GCGCGCGCCCTTCGGCCGCAATCTCATCTTCAACTC...GACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp GAGCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCAGTCAGCCACACAATGCCCTTGCCAAAGTaGGTGAAGACGTGGGAGACC +
Preference number: 5 (lower is better)
Translates to: ELVDAAAVLSSAPPVSHTMPLPK*VKTWET
Trigger: GGTCTCCCACGTCTTCACCAACTTTGGCAAGGGCAT...TGTGTGGCTGACTGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS GCA 90 bp CGTCGCCGCGATAGCCGGGCGCCCATCTCCAGTAGCCAGAGTCCTTaGTTCATGCGTCATCTGCTGACCCAGATCATGACTCCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: RRRDSRAPISSSQSP*FMRHLLTQIMTPLF
Trigger: GAAGAGAGGAGTCATGATCTGGGTCAGCAGATGACGCATGAAGCAAGGACTCTGGCTACTGGAGATGGGCGCCCGGCTATCGCGGCGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595329.5
ENST00000635115.1
CDS-3UTR CAA 90 bp CTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCAGCGGGAACTCCTCCTaGTCTTCGTTGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LPTIITPKTCRQVSAPCVSGNSS*SSLLGR
Trigger: CCTGCCCAGCAACGAAGACAAGGAGGAGTTCCCGCT...GACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACAAGCGGGAACTCCTCCTaGTCTTCGTTGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTSGNSS*SSLLGR
Trigger: CCTGCCCAGCAACGAAGACAAGGAGGAGTTCCCGCT...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTTGCTCTCCGCAGGAGTaGAAGATGAGATTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGCSPQE*KMRLRP
Trigger: CGGCCGCAATCTCATCTTCAACTCCTGCGGAGAGCA...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCCCTCTTGGAGTCCCTTaGCCATTCTCCACCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTPLGVP*PFSTLL
Trigger: CAGCAGGGTGGAGAATGGCAAAGGGACTCCAAGAGG...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GGAGGTGTCTCGTTTCAGAGGGGTATCAAGCCAGTCAGTGGCCCCCTGTGGACCTCCACAAGCTGCCTCTaGGAGCACCATCTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GGVSFQRGIKPVSGPLWTSTSCL*EHHLGR
Trigger: CCTTCCCAGATGGTGCTCCAAGAGGCAGCTTGTGGA...GGTCCACAGGGGGCCACTGACTGGCTTGATACCCCTCTGAAACGAGACACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp TTCCTTTTCATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAAGCGGGAACTCCTCCTaGTCTTCGTTGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: FLFIHIQKADPELVDAAASGNSS*SSLLGR
Trigger: CCTGCCCAGCAACGAAGACAAGGAGGAGTTCCCGCT...TGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTATGAAAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
CDS-3UTR CAA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGTGCTCTCCGCAGGAGTaGAAGATGAGATTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: RVWSGKSGVSRPSELRALCSPQE*KMRLRP
Trigger: CGGCCGCAATCTCATCTTCAACTCCTGCGGAGAGCA...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGGCTGCAAGGCTGGTCTaGACTGACAACGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGAARLV*TDNVRQ
Trigger: CTGCCTGACGTTGTCAGTCAAGACCAGCCTTGCAGC...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp GCTGGTAGACGCAGCCGCAGTTCTCTCGAGCGCCCCACCTGCCAGGCAGCAGTCTCCAAGAAGTCTCCCTaGATAACCCTCTCTAAAGCA +
Preference number: 5 (lower is better)
Translates to: AGRRSRSSLERPTCQAAVSKKSP*ITLSKA
Trigger: TGCTTTAGAGAGGGTTATCAAGGGAGACTTCTTGGA...GACTGCTGCCTGGCAGGTGGGGCGCTCGAGAGAACTGCGGCTGCGTCTACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GCTTCCTGTTGGATCAGCCAATGGGATGCTCCGGCAGGGGATGGAAGTGAAAGAGGAAATGAGCCCCTGTaGCAGAGCCGCTGCCAAGCC +
Preference number: 5 (lower is better)
Translates to: ASCWISQWDAPAGDGSERGNEPL*QSRCQA
Trigger: GGCTTGGCAGCGGCTCTGCAACAGGGGCTCATTTCC...TCTTTCACTTCCATCCCCTGCCGGAGCATCCCATTGGCTGATCCAACAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GACCTGAAGATGCATGATGGGCTATACATCTCTCCTTGGCCTCTTGGAGTCCCTGCTGGGCAGGCAGCGTaGAGCCACTGCGTAGAGTGC +
Preference number: 5 (lower is better)
Translates to: DLKMHDGLYISPWPLGVPAGQAA*SHCVEC
Trigger: GCACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGC...AGGGACTCCAAGAGGCCAAGGAGAGATGTATAGCCCATCATGCATCTTCAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GGTGAAGACGTGGGAGACCTGTCGGCAGCCCCTCTCAGTCCACTGAAGGACCGGGGTGAGGCTGAGAACTaGACCACTTCCTTTTCATAC +
Preference number: 5 (lower is better)
Translates to: GEDVGDLSAAPLSPLKDRGEAEN*TTSFSY
Trigger: GTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCACC...CCGGTCCTTCAGTGGACTGAGAGGGGCTGCCGACAGGTCTCCCACGTCTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CAA 90 bp AGGGTGTGGAGTGGGAAATCAGGGGTCTCACGGCCTTCAGAGCTGAGAGCCTTGATGCCCTTGCCAAAGTaGGTGAAGACGTGGGAGACC +
Preference number: 5 (lower is better)
Translates to: RVWSGKSGVSRPSELRALMPLPK*VKTWET
Trigger: GGTCTCCCACGTCTTCACCAACTTTGGCAAGGGCAT...CAAGGCTCTCAGCTCTGAAGGCCGTGAGACCCCTGATTTCCCACTCCACACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTTCTCAAGGGACTGCCTaGTCCCCCAAGGAAAAAGCA +
Preference number: 5 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGSQGTA*SPKEKA
Trigger: TGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGA...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp ATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGACCCATTGCTTCCTGTaGGATCAGCCAATGGGATGC +
Preference number: 5 (lower is better)
Translates to: IHIQKADPELVDAAAVLSTHCFL*DQPMGC
Trigger: GCATCCCATTGGCTGATCCAACAGGAAGCAATGGGT...CGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp ATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGTCTCTCCTTGGCCTCTaGGAGTCCCTTTGCCATTCT +
Preference number: 5 (lower is better)
Translates to: IHIQKADPELVDAAAVLSSLLGL*ESLCHS
Trigger: AGAATGGCAAAGGGACTCCAAGAGGCCAAGGAGAGA...CGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp TACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACGTGGGAGACCTGTCGGCATCCACAAGCTGCCTCTaGGAGCACCATCTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: YVADALAKVGEDVGDLSASTSCL*EHHLGR
Trigger: CCTTCCCAGATGGTGCTCCAAGAGGCAGCTTGTGGA...TGCCGACAGGTCTCCCACGTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CAA 90 bp CTGCTCAAAAGATACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACGTGGGAGAGTTGAAGATGAGATaGCGGCCGAAGGGCGCGCGC +
Preference number: 5 (lower is better)
Translates to: LLKRYVADALAKVGEDVGELKMR*RPKGAR
Trigger: GCGCGCGCCCTTCGGCCGCAATCTCATCTTCAACTC...TCCCACGTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTATCTTTTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CAA 90 bp CGCCCTCGTTCCAGTAAACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACATCCACAAGCTGCCTCTaGGAGCACCATTCGAAAGAG +
Preference number: 5 (lower is better)
Translates to: RPRSSKPTTFRVGVMAITSTSCL*EHHSKE
Trigger: CTCTTTCGAATGGTGCTCCAAGAGGCAGCTTGTGGA...TGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTTTACTGGAACGAGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTGCTGGGCAGGCAGCGTaGAGCCACTGCGTAGAGTGC +
Preference number: 5 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFAGQAA*SHCVEC
Trigger: GCACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGC...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp ATACACATCCAGAAGGCGGACCCGGAGCTGGTAGACGCAGCCGCAGTTCTCTCGGGTGAGGCTGAGAACTaGACCACTTCCTTTTCATAC +
Preference number: 5 (lower is better)
Translates to: IHIQKADPELVDAAAVLSGEAEN*TTSFSY
Trigger: GTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCACC...CGAGAGAACTGCGGCTGCGTCTACCAGCTCCGGGTCCGCCTTCTGGATGTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000635016.1
CDS-3UTR CAA 90 bp CTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCTGTTTATGGCCAGTTTaGGGGCCAGTTTATGGCCAG +
Preference number: 5 (lower is better)
Translates to: LPTIITPKTCRQVSAPCVCLWPV*GPVYGQ
Trigger: CTGGCCATAAACTGGCCCCAAAACTGGCCATAAACA...GACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGTGTTTATGGCCAGTTTaGGGGCCAGTTTATGGCCAG +
Preference number: 5 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGCLWPV*GPVYGQ
Trigger: CTGGCCATAAACTGGCCCCAAAACTGGCCATAAACA...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp CAGGCAGCTGACCTCTATGAAAGCCTGACCCTCATCTTTGTGGGACAGGACATGACATCTGGACCACATTaGGAGACGTCCTGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: QAADLYESLTLIFVGQDMTSGPH*ETSWPG
Trigger: CCCAGGCCAGGACGTCTCCAAATGTGGTCCAGATGT...CATGTCCTGTCCCACAAAGATGAGGGTCAGGCTTTCATAGAGGTCAGCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp ACCAGAGATTTCCCCAAACAGCAGATGACTTTGTTAGTCTCAAGGACAGACTGCGCTGGGCAGGCAGCGTaGAGCCACTGCGTAGAGTGC +
Preference number: 5 (lower is better)
Translates to: TRDFPKQQMTLLVSRTDCAGQAA*SHCVEC
Trigger: GCACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGC...GCAGTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTTGGGGAAATCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTGAGTTGAAGATGAGATaGCGGCCGAAGGGCGCGCGC +
Preference number: 5 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFELKMR*RPKGAR
Trigger: GCGCGCGCCCTTCGGCCGCAATCTCATCTTCAACTC...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp CCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGCAGATATTTGCTCTCCGCAGGAGTaGAAGATGAGATTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: PSGWGSWPSQTCHSAADICSPQE*KMRLRP
Trigger: CGGCCGCAATCTCATCTTCAACTCCTGCGGAGAGCA...AATATCTGCAGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp GACCTGAAGATGCATGATGGGCTATACATCTCTCCTTGGCCTCTTGGAGTCCCTTGCTCTCCGCAGGAGTaGAAGATGAGATTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: DLKMHDGLYISPWPLGVPCSPQE*KMRLRP
Trigger: CGGCCGCAATCTCATCTTCAACTCCTGCGGAGAGCA...AGGGACTCCAAGAGGCCAAGGAGAGATGTATAGCCCATCATGCATCTTCAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp CTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTCGGTGAGGCTGAGAACTaGACCACTTCCTTTTCATAC +
Preference number: 5 (lower is better)
Translates to: LPTIITPKTCRQVSAPCVGEAEN*TTSFSY
Trigger: GTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCACC...GACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp GGGAGGCTGAGGGCTGGCTCCATCTTGATGAAGGTCCTGCACATCTGGACCACAGGTGAGGCTGAGAACTaGACCACTTCCTTTTCATAC +
Preference number: 5 (lower is better)
Translates to: GRLRAGSILMKVLHIWTTGEAEN*TTSFSY
Trigger: GTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCACC...TGTGGTCCAGATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCTCAGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp CCTGCCCACGATCATTACCCCCAAAACATGCCGGCAAGTCTCTGCTCCCTGCGTAGTCCACCGAGATCCTaGCAGGAGAAGAAAATTTGC +
Preference number: 5 (lower is better)
Translates to: PAHDHYPQNMPASLCSLRSPPRS*QEKKIC
Trigger: GCAAATTTTCTTCTCCTGCAAGGATCTCGGTGGACT...ACGCAGGGAGCAGAGACTTGCCGGCATGTTTTGGGGGTAATGATCGTGGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGAGTCCACCGAGATCCTaGCAGGAGAAGAAAATTTGC +
Preference number: 5 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGSPPRS*QEKKIC
Trigger: GCAAATTTTCTTCTCCTGCAAGGATCTCGGTGGACT...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp CTAACTGTTACTAGCTCAGGGGCTCCTGCCTACAACTTTGTAAACAGTCCTTCTCCGCTACCCGTGGGGTaGATGGGGCGGGAAATGAGC +
Preference number: 5 (lower is better)
Translates to: LTVTSSGAPAYNFVNSPSPLPVG*MGREMS
Trigger: GCTCATTTCCCGCCCCATCAACCCCACGGGTAGCGG...AGAAGGACTGTTTACAAAGTTGTAGGCAGGAGCCCCTGAGCTAGTAACAGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp CAGGCAGCTGACCTCTATGAAAGCCTGACCCTCATCTTTGTGGGACAGGACATGAGGAGCTGGAATGCTTaGGGGCAGAACCTGGGTGTT +
Preference number: 5 (lower is better)
Translates to: QAADLYESLTLIFVGQDMRSWNA*GQNLGV
Trigger: AACACCCAGGTTCTGCCCCAAAGCATTCCAGCTCCT...CATGTCCTGTCCCACAAAGATGAGGGTCAGGCTTTCATAGAGGTCAGCTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GTCCTTCTCAAGGGACTGCCTTGTCCCCCAAGGAAAAAGCAAATCTCCATGGCAACATCTGGACCACATTaGGAGACGTCCTGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: VLLKGLPCPPRKKQISMATSGPH*ETSWPG
Trigger: CCCAGGCCAGGACGTCTCCAAATGTGGTCCAGATGT...TGCCATGGAGATTTGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp CCCGTACTGCTCAAAAGATACGTAGCGGATGCCCTTGCCAAAGTTGGTGAAGACATGCCCTTGCCAAAGTaGGTGAAGACGTGGGAGACC +
Preference number: 5 (lower is better)
Translates to: PVLLKRYVADALAKVGEDMPLPK*VKTWET
Trigger: GGTCTCCCACGTCTTCACCAACTTTGGCAAGGGCAT...GTCTTCACCAACTTTGGCAAGGGCATCCGCTACGTATCTTTTGAGCAGTACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596025.5
ENST00000634720.1
CDS-3UTR CAA 90 bp GCTTCCTGTTGGATCAGCCAATGGGATGCTCCGGCAGGGGATGGAAGTGAAAGAGCTATACATCTCTCCTaGGCCTCTTGGAGTCCCTTT +
Preference number: 5 (lower is better)
Translates to: ASCWISQWDAPAGDGSERAIHLS*ASWSPF
Trigger: AAAGGGACTCCAAGAGGCCAAGGAGAGATGTATAGC...TCTTTCACTTCCATCCCCTGCCGGAGCATCCCATTGGCTGATCCAACAGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GACCTGAAGATGCATGATGGGCTATACATCTCTCCTTGGCCTCTTGGAGTCCCTAGGAGCTGGAATGCTTaGGGGCAGAACCTGGGTGTT +
Preference number: 5 (lower is better)
Translates to: DLKMHDGLYISPWPLGVPRSWNA*GQNLGV
Trigger: AACACCCAGGTTCTGCCCCAAAGCATTCCAGCTCCT...AGGGACTCCAAGAGGCCAAGGAGAGATGTATAGCCCATCATGCATCTTCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCAGGGCTGGCTCCATCTaGATGAAGGTCCTGCACATC +
Preference number: 5 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVRAGSI*MKVLHI
Trigger: GATGTGCAGGACCTTCATCAAGATGGAGCCAGCCCT...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp AGAAGGGAAACCGAGCAGACGAGAGGCTGGGCGTGTGTGCCTTTAGCGGGTCGGCTCAATCAGTGTTTGTaGAACATTAAGGGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: RRETEQTRGWACVPLAGRLNQCL*NIKGFC
Trigger: GCAAAACCCCTTAATGTTCAACAAACACTGATTGAG...CCGACCCGCTAAAGGCACACACGCCCAGCCTCTCGTCTGCTCGGTTTCCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CAA 90 bp CCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGCAGATATTTCCACAAGCTGCCTCTaGGAGCACCATTCGAAAGAG +
Preference number: 5 (lower is better)
Translates to: PSGWGSWPSQTCHSAADISTSCL*EHHSKE
Trigger: CTCTTTCGAATGGTGCTCCAAGAGGCAGCTTGTGGA...AATATCTGCAGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp ATTCATGGAAGGTGTGCTGAGAACCAGCCACCTGGGAGCCCTACTGTCCCTGGGAAACAGCAGATGACTTaGTTAGTCTCAAGGACAGAC +
Preference number: 5 (lower is better)
Translates to: IHGRCAENQPPGSPTVPGKQQMT*LVSRTD
Trigger: GTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTT...CCCAGGGACAGTAGGGCTCCCAGGTGGCTGGTTCTCAGCACACCTTCCATGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp GAGACCCTGGGCATCCACAAGGTGGTCAGGGGAGGTGTCTCGTTTCAGAGGGGTATAAATTGTGCAGTATaGGTGGAAGGATGGGTAAGT +
Preference number: 5 (lower is better)
Translates to: ETLGIHKVVRGGVSFQRGINCAV*VEGWVS
Trigger: ACTTACCCATCCTTCCACCAATACTGCACAATTTAT...ACCCCTCTGAAACGAGACACCTCCCCTGACCACCTTGTGGATGCCCAGGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GACCTGAAGATGCATGATGGGCTATACATCTCTCCTTGGCCTCTTGGAGTCCCTTCTCAAGGGACTGCCTaGTCCCCCAAGGAAAAAGCA +
Preference number: 5 (lower is better)
Translates to: DLKMHDGLYISPWPLGVPSQGTA*SPKEKA
Trigger: TGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGA...AGGGACTCCAAGAGGCCAAGGAGAGATGTATAGCCCATCATGCATCTTCAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp CAGGCAGCTGACCTCTATGAAAGCCTGACCCTCATCTTTGTGGGACAGGACATGGGTGAGGCTGAGAACTaGACCACTTCCTTTTCATAC +
Preference number: 5 (lower is better)
Translates to: QAADLYESLTLIFVGQDMGEAEN*TTSFSY
Trigger: GTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCACC...CATGTCCTGTCCCACAAAGATGAGGGTCAGGCTTTCATAGAGGTCAGCTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GTCCTTCTCAAGGGACTGCCTTGTCCCCCAAGGAAAAAGCAAATCTCCATGGCAGCTATACATCTCTCCTaGGCCTCTTGGAGTCCCTTT +
Preference number: 5 (lower is better)
Translates to: VLLKGLPCPPRKKQISMAAIHLS*ASWSPF
Trigger: AAAGGGACTCCAAGAGGCCAAGGAGAGATGTATAGC...TGCCATGGAGATTTGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GCAAACAGTCCTGGCATTCAAGTCACAGTCAGAAGCCACCTCCTCCAAGAAGTCCAGAACCTGGGTGTTTaGGGAAGAAGGCATTCATCC +
Preference number: 5 (lower is better)
Translates to: ANSPGIQVTVRSHLLQEVQNLGV*GRRHSS
Trigger: GGATGAATGCCTTCTTCCCAAAACACCCAGGTTCTG...GACTTCTTGGAGGAGGTGGCTTCTGACTGTGACTTGAATGCCAGGACTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp CTAACTGTTACTAGCTCAGGGGCTCCTGCCTACAACTTTGTAAACAGTCCTTCTTGGGTGGTCCTGCGGTaGATTCTGGAGGCTTTTGGG +
Preference number: 5 (lower is better)
Translates to: LTVTSSGAPAYNFVNSPSWVVLR*ILEAFG
Trigger: CCCAAAAGCCTCCAGAATCAACCGCAGGACCACCCA...AGAAGGACTGTTTACAAAGTTGTAGGCAGGAGCCCCTGAGCTAGTAACAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTAGCGGGAACTCCTCCTaGTCTTCGTTGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVSGNSS*SSLLGR
Trigger: CCTGCCCAGCAACGAAGACAAGGAGGAGTTCCCGCT...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp CCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTGCAGATATTGGTGAGGCTGAGAACTaGACCACTTCCTTTTCATAC +
Preference number: 5 (lower is better)
Translates to: PSGWGSWPSQTCHSAADIGEAEN*TTSFSY
Trigger: GTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCACC...AATATCTGCAGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp CTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGCTGCAAGGCTGGTCTaGACTGACAACGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LTAFRAESLEQRFTHIFIAARLV*TDNVRQ
Trigger: CTGCCTGACGTTGTCAGTCAAGACCAGCCTTGCAGC...AATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp AACCCACAACCTTCAGGGTGGGGGTCATGGCCATCACAAACATGTCACAGTGCTAAACAGCAGATGACTTaGTTAGTCTCAAGGACAGAC +
Preference number: 5 (lower is better)
Translates to: NPQPSGWGSWPSQTCHSAKQQMT*LVSRTD
Trigger: GTCTGTCCTTGAGACTAACAAAGTCATCTGCTGTTT...AGCACTGTGACATGTTTGTGATGGCCATGACCCCCACCCTGAAGGTTGTGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp GCTTCCTGTTGGATCAGCCAATGGGATGCTCCGGCAGGGGATGGAAGTGAAAGAATAAATTGTGCAGTATaGGTGGAAGGATGGGTAAGT +
Preference number: 5 (lower is better)
Translates to: ASCWISQWDAPAGDGSERINCAV*VEGWVS
Trigger: ACTTACCCATCCTTCCACCAATACTGCACAATTTAT...TCTTTCACTTCCATCCCCTGCCGGAGCATCCCATTGGCTGATCCAACAGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp GTCCTTCTCAAGGGACTGCCTTGTCCCCCAAGGAAAAAGCAAATCTCCATGGCATCCAAGAAGTCTCCCTaGATAACCCTCTCTAAAGCA +
Preference number: 5 (lower is better)
Translates to: VLLKGLPCPPRKKQISMASKKSP*ITLSKA
Trigger: TGCTTTAGAGAGGGTTATCAAGGGAGACTTCTTGGA...TGCCATGGAGATTTGCTTTTTCCTTGGGGGACAAGGCAGTCCCTTGAGAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000601394.1
ENST00000635016.1
CDS-3UTR CAA 90 bp ACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGACTGTGAACAGCCTGGTTaGTCACACAGCATGATGGCC +
Preference number: 5 (lower is better)
Translates to: TAFRAESLEQRFTHIFIDCEQPG*SHSMMA
Trigger: GGCCATCATGCTGTGTGACAAACCAGGCTGTTCACA...GTCAATAAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp TTCTTACAGGAAATAAAGGGATGGGCTGAAATAAAGGGATGGGTCTGGCTAGTTTGTGAACAGCCTGGTTaGTCACACAGCATGATGGCC +
Preference number: 5 (lower is better)
Translates to: FLQEIKGWAEIKGWVWLVCEQPG*SHSMMA
Trigger: GGCCATCATGCTGTGTGACAAACCAGGCTGTTCACA...AACTAGCCAGACCCATCCCTTTATTTCAGCCCATCCCTTTATTTCCTGTAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp GGTCTCACGGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTAGTGCTGCAGATATTTaGTTTATGGCCAGTTTTGGG +
Preference number: 5 (lower is better)
Translates to: GLTAFRAESLEQRFTHIFSAADI*FMASFG
Trigger: CCCAAAACTGGCCATAAACAAAATATCTGCAGCACT...AAATATGTGGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCCGTGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292852.9
ENST00000634982.2
CDS-3UTR CAA 90 bp TGGGATGTAAGAAGGGCTCGATACTTCTTAGCTGTTATGATTATAGATATCCAGGTCTTGACACAGGGCTaGGGATGTAAGAAGGGCTCG +
Preference number: 5 (lower is better)
Translates to: WDVRRARYFLAVMIIDIQVLTQG*GCKKGS
Trigger: CGAGCCCTTCTTACATCCCAAGCCCTGTGTCAAGAC...CTGGATATCTATAATCATAACAGCTAAGAAGTATCGAGCCCTTCTTACATCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CAA 90 bp CTTAGCTGTTATGATTATAGATATCCAGGAGTGACAGAAGGGAAACCGAGCAGACGATATGTAAGCGTCTaGACACAGGGCTTGGGATGT +
Preference number: 5 (lower is better)
Translates to: LSCYDYRYPGVTEGKPSRRYVSV*TQGLGC
Trigger: ACATCCCAAGCCCTGTGTCAAGACGCTTACATATCG...TCTGCTCGGTTTCCCTTCTGTCACTCCTGGATATCTATAATCATAACAGCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CAA 90 bp ATACTTCTTAGCTGTTATGATTATAGATATCCAGGAGTGACAGAAGGGAAACCGTCCACAAGCTGCCTCTaGGAGCACCATTCGAAAGAG +
Preference number: 5 (lower is better)
Translates to: ILLSCYDYRYPGVTEGKPSTSCL*EHHSKE
Trigger: CTCTTTCGAATGGTGCTCCAAGAGGCAGCTTGTGGA...CGGTTTCCCTTCTGTCACTCCTGGATATCTATAATCATAACAGCTAAGAAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CAA 90 bp GGATGTAAGAAGGGCTCGATACTTCTTAGCTGTTATGATTATAGATATCCAGGATCCACAAGCTGCCTCTaGGAGCACCATTCGAAAGAG +
Preference number: 5 (lower is better)
Translates to: GCKKGSILLSCYDYRYPGSTSCL*EHHSKE
Trigger: CTCTTTCGAATGGTGCTCCAAGAGGCAGCTTGTGGA...TCCTGGATATCTATAATCATAACAGCTAAGAAGTATCGAGCCCTTCTTACATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CAA 90 bp GGATGTAAGAAGGGCTCGATACTTCTTAGCTGTTATGATTATAGATATCCAGGACGATATGTAAGCGTCTaGACACAGGGCTTGGGATGT +
Preference number: 5 (lower is better)
Translates to: GCKKGSILLSCYDYRYPGRYVSV*TQGLGC
Trigger: ACATCCCAAGCCCTGTGTCAAGACGCTTACATATCG...TCCTGGATATCTATAATCATAACAGCTAAGAAGTATCGAGCCCTTCTTACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CAA 90 bp AAGGGCTCGATACTTCTTAGCTGTTATGATTATAGATATCCAGGAGTGACAGAAGGTGAGGCTGAGAACTaGACCACTTCCTTTTCATAC +
Preference number: 5 (lower is better)
Translates to: KGSILLSCYDYRYPGVTEGEAEN*TTSFSY
Trigger: GTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCACC...TTCTGTCACTCCTGGATATCTATAATCATAACAGCTAAGAAGTATCGAGCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CAA 90 bp TCGATACTTCTTAGCTGTTATGATTATAGATATCCAGGAGTGACAGAAGGGAAAGGTGAGGCTGAGAACTaGACCACTTCCTTTTCATAC +
Preference number: 5 (lower is better)
Translates to: SILLSCYDYRYPGVTEGKGEAEN*TTSFSY
Trigger: GTATGAAAAGGAAGTGGTCAAGTTCTCAGCCTCACC...TTTCCCTTCTGTCACTCCTGGATATCTATAATCATAACAGCTAAGAAGTATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS-3UTR CAA 90 bp AGGGCTTGGGATGTAAGAAGGGCTCGATACTTCTTAGCTGTTATGATTATAGATCTCAATCAGTGTTTGTaGAACATTAAGGGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: RAWDVRRARYFLAVMIIDLNQCL*NIKGFC
Trigger: GCAAAACCCCTTAATGTTCAACAAACACTGATTGAG...ATCTATAATCATAACAGCTAAGAAGTATCGAGCCCTTCTTACATCCCAAGCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS GCA 72 bp GTTGCTGGGCAGGCAGCGTTGAGCCACTGCGTAGAGTaGGCGGCCCTCGGCGCTGCGGTCGCGGGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: VAGQAALSHCVE*AALGAAVAGQL
Trigger: CAGCTGGCCCGCGACCGCAGCGCCGAGGGCCGCGCACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGCAAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292852.9
ENST00000595329.5
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000634982.2
ENST00000635016.1
ENST00000635115.1
CDS CCA 72 bp GGGCCCGTCCACTATGTCGCGCCAGGCGCGGCACACTaGGCGGCATCGCGTGACCAAGGAGCGTGGCGGCAC +
Preference number: 6 (lower is better)
Translates to: GPVHYVAPGAAH*AASRDQGAWRH
Trigger: GTGCCGCCACGCTCCTTGGTCACGCGATGCCGCCCAGTGTGCCGCGCCTGGCGCGACATAGTGGACGGGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292852.9
ENST00000595329.5
ENST00000596025.5
ENST00000634720.1
ENST00000634982.2
ENST00000635115.1
CDS CAA 90 bp GCTGCTCGGAGGCGGCAGCGGCGGGCTAAGCTTCCCTTTCCCACTTaGTTCTGGGAGGCAGTCGAGGGGCTCCCCGTGATCGGCGTGGCC +
Preference number: 6 (lower is better)
Translates to: AARRRQRRAKLPFPT*FWEAVEGLPVIGVA
Trigger: GGCCACGCCGATCACGGGGAGCCCCTCGACTGCCTCCCAGAACAAAGTGGGAAAGGGAAGCTTAGCCCGCCGCTGCCGCCTCCGAGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292852.9
ENST00000596025.5
ENST00000634720.1
ENST00000634982.2
CDS CAA 90 bp GCACAGCGGGAACTCCTCCTTGTCTTCGTTGCTGGGCAGGCAGCGTaGAGCCACTGCGTAGAGTGCGCGGCCCTCGGCGCTGCGGTCGCG +
Preference number: 6 (lower is better)
Translates to: AQRELLLVFVAGQAA*SHCVECAALGAAVA
Trigger: CGCGACCGCAGCGCCGAGGGCCGCGCACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAGGAGGAGTTCCCGCTGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292852.9
ENST00000595329.5
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000634982.2
ENST00000635016.1
ENST00000635115.1
CDS GCA 72 bp CTTGTCTTCGTTGCTGGGCAGGCAGCGTTGAGCCACTaGGTAGAGTGCGCGGCCCTCGGCGCTGCGGTCGCG +
Preference number: 6 (lower is better)
Translates to: LVFVAGQAALSH*VECAALGAAVA
Trigger: CGCGACCGCAGCGCCGAGGGCCGCGCACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292852.9
ENST00000595329.5
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000634982.2
ENST00000635016.1
ENST00000635115.1
CDS CCA 72 bp CAGCGGCGGGCTAAGCTTCCCTTTCCCACTTTGTTCTaGGAGGCAGTCGAGGGGCTCCCCGTGATCGGCGTG +
Preference number: 6 (lower is better)
Translates to: QRRAKLPFPTLF*EAVEGLPVIGV
Trigger: CACGCCGATCACGGGGAGCCCCTCGACTGCCTCCCAGAACAAAGTGGGAAAGGGAAGCTTAGCCCGCCGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292852.9
ENST00000596025.5
ENST00000634720.1
ENST00000634982.2
CDS CCA 72 bp GGGCGCACAGCGGGAACTCCTCCTTGTCTTCGTTGCTaGGCAGGCAGCGTTGAGCCACTGCGTAGAGTGCGC +
Preference number: 6 (lower is better)
Translates to: GRTAGTPPCLRC*AGSVEPLRRVR
Trigger: GCGCACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAGGAGGAGTTCCCGCTGTGCGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292852.9
ENST00000595329.5
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000634982.2
ENST00000635016.1
ENST00000635115.1
CDS CAA 72 bp AGGCGGCAGCGGCGGGCTAAGCTTCCCTTTCCCACTTaGTTCTGGGAGGCAGTCGAGGGGCTCCCCGTGATC +
Preference number: 6 (lower is better)
Translates to: RRQRRAKLPFPT*FWEAVEGLPVI
Trigger: GATCACGGGGAGCCCCTCGACTGCCTCCCAGAACAAAGTGGGAAAGGGAAGCTTAGCCCGCCGCTGCCGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292852.9
ENST00000596025.5
ENST00000634720.1
ENST00000634982.2
CDS CAA 72 bp GAACTCCTCCTTGTCTTCGTTGCTGGGCAGGCAGCGTaGAGCCACTGCGTAGAGTGCGCGGCCCTCGGCGCT +
Preference number: 6 (lower is better)
Translates to: ELLLVFVAGQAA*SHCVECAALGA
Trigger: AGCGCCGAGGGCCGCGCACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAGGAGGAGTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292852.9
ENST00000595329.5
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000634982.2
ENST00000635016.1
ENST00000635115.1
CDS GCA 72 bp CCAGGGCGCACAGCGGGAACTCCTCCTTGTCTTCGTTaGTGGGCAGGCAGCGTTGAGCCACTGCGTAGAGTG +
Preference number: 6 (lower is better)
Translates to: PGRTAGTPPCLR*WAGSVEPLRRV
Trigger: CACTCTACGCAGTGGCTCAACGCTGCCTGCCCAGCAACGAAGACAAGGAGGAGTTCCCGCTGTGCGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292852.9
ENST00000595329.5
ENST00000596025.5
ENST00000601394.1
ENST00000634720.1
ENST00000634982.2
ENST00000635016.1
ENST00000635115.1
CDS TCA 72 bp TCTGGACCCACCTGTCGGCAGCCCCTCTCAGTCCACTaGAGGACCGGGTCAGGTGAGGCTGAGAACTTGACC +
Preference number: 6 (lower is better)
Translates to: SGPTCRQPLSVH*RTGSGEAENLT
Trigger: GGTCAAGTTCTCAGCCTCACCTGACCCGGTCCTTCAGTGGACTGAGAGGGGCTGCCGACAGGTGGGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599598.1
ENST00000634917.1
CDS GCA 72 bp GATAGCCGGGCGCCCATCTCCAGTAGCCAGAGTCCTTaGTTCATGCGTCATCTGCTGACCCAGATCATGACT +
Preference number: 6 (lower is better)
Translates to: DSRAPISSSQSP*FMRHLLTQIMT
Trigger: AGTCATGATCTGGGTCAGCAGATGACGCATGAAGCAAGGACTCTGGCTACTGGAGATGGGCGCCCGGCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595329.5
ENST00000635115.1