RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO11 (Homo sapiens)

Ensembl gene IDs: ENSG00000138081

Ensembl transcript IDs: ENST00000402508.5, ENST00000403359.8, ENST00000405808.5, ENST00000424163.2, ENST00000434234.5, ENST00000465204.5, ENST00000470899.1, ENST00000480038.1, ENST00000492225.5, ENST00000493962.6, ENST00000681999.1, ENST00000682451.1, ENST00000682484.1, ENST00000682975.1, ENST00000683894.1, ENST00000684085.1, ENST00000684523.1, ENST00000684712.1

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCTATTaGAGATTACTACTGCAAATTGGACTGCATTCAATGCTAGTTGTA +
Preference number: 1 (lower is better)
Translates to: LVPMSIKAATKLLVY*RLLLQIGLHSMLVV
Trigger: TACAACTAGCATTGAATGCAGTCCAATTTGCAGTAGTAATCTTCAATAGACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR CCA 90 bp GGCAGCAACAAAGCTGCTTGTCTATTGAAGATTACTACTGCAAATTaGACTGCATTCAATGCTAGTTGTAAAAACACCAGCTTTTCAGAA +
Preference number: 1 (lower is better)
Translates to: GSNKAACLLKITTAN*TAFNASCKNTSFSE
Trigger: TTCTGAAAAGCTGGTGTTTTTACAACTAGCATTGAATGCAGTCCAATTTGCAGTAGTAATCTTCAATAGACAAGCAGCTTTGTTGCTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR GCA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATGGTGATTTTGAATGCTaGACAGGGAAGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYGDFEC*TGKGRK
Trigger: TTTCCTTCCCTTCCCTGTGCAGCATTCAAAATCACC...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR TCA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATCCAGCTTTGAGATCCTaGGTCAATATATTGCCACTT +
Preference number: 2 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYPALRS*VNILPL
Trigger: AAGTGGCAATATATTGACTCAGGATCTCAAAGCTGG...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR TCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACCCAGCTTTGAGATCCTaGGTCAATATATTGCCACTT +
Preference number: 2 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHPALRS*VNILPL
Trigger: AAGTGGCAATATATTGACTCAGGATCTCAAAGCTGG...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR TCA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCAGGGGAGGAAAAGCTATaGAACTGTATAGGGCTGTAT +
Preference number: 2 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSGEEKL*NCIGLY
Trigger: ATACAGCCCTATACAGTTTCATAGCTTTTCCTCCCC...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR GCA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGCCTGAGTCAATATATTaGCACTTTCTTTTTGGTAGC +
Preference number: 2 (lower is better)
Translates to: FIERTYILGHEYSYSKSRPESIY*HFLFGS
Trigger: GCTACCAAAAAGAAAGTGGCAATATATTGACTCAGG...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR CCA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCATTACTACTGCAAATTaGACTGCATTCAATGCTAGT +
Preference number: 2 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVITTAN*TAFNAS
Trigger: ACTAGCATTGAATGCAGTCCAATTTGCAGTAGTAAT...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR TCA 90 bp ACTGAGTTACAAGAATACTTTTGTTTTACAGTGCATCCCTTCCTAGGAAGTCTCCTTCATAGTGTCAACTaGCCTTGTGTATCCATTTTT +
Preference number: 2 (lower is better)
Translates to: TELQEYFCFTVHPFLGSLLHSVN*PCVSIF
Trigger: AAAAATGGATACACAAGGTCAGTTGACACTATGAAG...GAGACTTCCTAGGAAGGGATGCACTGTAAAACAAAAGTATTCTTGTAACTCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR GCA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTCCTGAGTCAATATATTaGCACTTTCTTTTTGGTAGC +
Preference number: 2 (lower is better)
Translates to: SFIERTYILGHEYSYSKSPESIY*HFLFGS
Trigger: GCTACCAAAAAGAAAGTGGCAATATATTGACTCAGG...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR CCA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCAGTTATGATGTTACAATaGCAGGACTTTTTCTTTAGG +
Preference number: 2 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSVMMLQ*QDFFFR
Trigger: CCTAAAGAAAAAGTCCTGCCATTGTAACATCATAAC...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR CCA 90 bp CTAGTGAGGATGCACATTTATCCTTGTGTATCCATTTTTAATACAGTCTCTTCCAAAACTGATAATGGTTaGATCCAGCTTTTCACACAA +
Preference number: 2 (lower is better)
Translates to: LVRMHIYPCVSIFNTVSSKTDNG*IQLFTQ
Trigger: TTGTGTGAAAAGCTGGATCCAACCATTATCAGTTTT...GGAAGAGACTGTATTAAAAATGGATACACAAGGATAAATGTGCATCCTCACTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434234.5
3UTR-3UTR CCA 90 bp CCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGCATGGGCAAATATTTTGTTATGATGTTACAATaGCAGGACTTTTTCTTTAGG +
Preference number: 2 (lower is better)
Translates to: PCVSIFNTVSSCSMGKYFVMMLQ*QDFFFR
Trigger: CCTAAAGAAAAAGTCCTGCCATTGTAACATCATAAC...AAAATATTTGCCCATGCTACAGGAAGAGACTGTATTAAAAATGGATACACAAGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000434234.5
3UTR-3UTR CAA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCCCAGCTTTTCAGAAGTaGGTATCTGTACAAAATTGC +
Preference number: 3 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVPAFQK*VSVQNC
Trigger: GCAATTTTGTACAGATACCAACTTCTGAAAAGCTGG...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR CAA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACGGGCTGTATATATACTaGTCTCAGCTTAATGCAGGA +
Preference number: 3 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHGLYIY*SQLNAG
Trigger: TCCTGCATTAAGCTGAGACAAGTATATATACAGCCC...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR CAA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCTTTCTTTTTGGTAGCTaGAGCTTCATAGTGTCAACT +
Preference number: 3 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVFLFGS*SFIVST
Trigger: AGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAA...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR CAA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTCCAGCTTTTCAGAAGTaGGTATCTGTACAAAATTGC +
Preference number: 3 (lower is better)
Translates to: SFIERTYILGHEYSYSKSPAFQK*VSVQNC
Trigger: GCAATTTTGTACAGATACCAACTTCTGAAAAGCTGG...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR TCA 72 bp ATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCTATTaGAGATTACTACTGCAAATTGGACTGCATTCAATG +
Preference number: 3 (lower is better)
Translates to: MSIKAATKLLVY*RLLLQIGLHSM
Trigger: CATTGAATGCAGTCCAATTTGCAGTAGTAATCTTCAATAGACAAGCAGCTTTGTTGCTGCCTTTATGGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
3UTR-3UTR CAA 90 bp CACATAAATGGGGGAGGAAAAGCTATGAAACTGTATAGGGCTGTATATATACTTTTTCTTTTTGGTAGCTaGAGCTTCATAGTGTCAACT +
Preference number: 3 (lower is better)
Translates to: HINGGGKAMKLYRAVYILFLFGS*SFIVST
Trigger: AGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAA...AAGTATATATACAGCCCTATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTCCGGCCGGGAGGGCCTaGCGCACGGGGAAGGCCGAA +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFPAGRA*RTGKAE
Trigger: TTCGGCCTTCCCCGTGCGTCAGGCCCTCCCGGCCGG...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR TCA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCACGTTGTTCCGCTCCTaGGGCAGCGGCGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVTLFRS*GSGGGG
Trigger: GCCGCCTCCGCCGCTGCCTCAGGAGCGGAACAACGT...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR GCA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGTGCGGGGGCTGCTGCTaGTGTTGCTGCACCGGGCGC +
Preference number: 4 (lower is better)
Translates to: FIERTYILGHEYSYSKSRCGGCC*CCCTGR
Trigger: GCGCCCGGTGCAGCAACAGCAGCAGCAGCCCCCGCA...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR TCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTGGCGGCGGCGGCGGCTaGAGAGACAGATCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLGGGGG*RDRSRS
Trigger: GGACCGGGATCTGTCTCTTCAGCCGCCGCCGCCGCC...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR GCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTGGCTGCTGCGGGGGCTaGTGCTGCTGTTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFGCCGG*CCCCCT
Trigger: GGTGCAGCAACAGCAGCAGCAGCCCCCGCAGCAGCC...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR CCA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGGCGTCCGCCGCTTaGGGATCCCGAGGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: SFIERTYILGHEYSYSKSRASAA*GSRGEA
Trigger: CGCTTCGCCTCGGGATCCCCAAGCGGCGGACGCCCT...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR CCA 90 bp ACTGAGTTACAAGAATACTTTTGTTTTACAGTGCATCCCTTCCTAGGAAGTCTCGCCGCGACACTCGCCTaGGTCTCCGGTTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: TELQEYFCFTVHPFLGSLAATLA*VSGWRL
Trigger: GAGCCGCCAACCGGAGACCCAGGCGAGTGTCGCGGC...GAGACTTCCTAGGAAGGGATGCACTGTAAAACAAAAGTATTCTTGTAACTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR TCA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATGTTCATTTGCCGGGCTaGGGTGGCGGCGTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYVHLPG*GGGVGG
Trigger: TCCGCCAACGCCGCCACCTCAGCCCGGCAAATGAAC...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR GCA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGCGCTGCTTCTGCTGCTaGTCCGTGGCAGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FIERTYILGHEYSYSKSRRCFCC*SVAGGA
Trigger: GGCTCCTCCTGCCACGGAGCAGCAGCAGAAGCAGCG...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR GCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTCGGACGGAGTTCATTTaGCGGGCTGAGGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFRTEFI*RAEVAA
Trigger: CGCCGCCACCTCAGCCCGGCAAATGAACTCCGTCCG...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR CCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACCTGAGGTGGCGGCGTTaGCGGAGGGACACACACACG +
Preference number: 4 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHLRWRR*RRDTHT
Trigger: CGTGTGTGTGTCCCTCCGCCAACGCCGCCACCTCAG...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR CCA 90 bp ACTGAGTTACAAGAATACTTTTGTTTTACAGTGCATCCCTTCCTAGGAAGTCTCTTTGCCGGGCTGAGGTaGCGGCGTTGGCGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: TELQEYFCFTVHPFLGSLFAGLR*RRWRRD
Trigger: GTCCCTCCGCCAACGCCGCCACCTCAGCCCGGCAAA...GAGACTTCCTAGGAAGGGATGCACTGTAAAACAAAAGTATTCTTGTAACTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR GCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTTGTCGCCGCTGCTTCTaGTGCTGCTCCGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFCRRCF*CCSVAG
Trigger: TCCTGCCACGGAGCAGCAGCAGAAGCAGCGGCGACA...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR GCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTCGCCGCTGCTTCTGCTaGTGCTCCGTGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLRRCFC*CSVAGG
Trigger: TCCTCCTGCCACGGAGCAGCAGCAGAAGCAGCGGCG...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR GCA 90 bp CACATAAATGGGGGAGGAAAAGCTATGAAACTGTATAGGGCTGTATATATACTTCAGCCCTGTCGCCGCTaGTTCTGCTGCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: HINGGGKAMKLYRAVYILQPCRR*FCCCSV
Trigger: CACGGAGCAGCAGCAGAAGCAGCGGCGACAGGGCTG...AAGTATATATACAGCCCTATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR CCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTGCCTGGGTCTCCGGTTaGCGGCTCGGACGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLAWVSG*RLGRSS
Trigger: TGAACTCCGTCCGAGCCGCCAACCGGAGACCCAGGC...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR GCA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCTCAGTACTGGAGTGCTaGCAGTTGTCACCCAGACTC +
Preference number: 4 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVSVLEC*QLSPRL
Trigger: GAGTCTGGGTGACAACTGGCAGCACTCCAGTACTGA...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCAGGGGTGATTTTGAATaGTGCACAGGGAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVRGDFE*CTGKGR
Trigger: CCTTCCCTTCCCTGTGCAGCATTCAAAATCACCCCT...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGCCAGTCTGCCCATGGTaGATTTCACATCGAACCACT +
Preference number: 4 (lower is better)
Translates to: FIERTYILGHEYSYSKSRPVCPW*ISHRTT
Trigger: AGTGGTTCGATGTGAAATTCACCATGGGCAGACTGG...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGATCAGTACTGGAGTGCTaGCAGTTGTCACCCAGACTC +
Preference number: 4 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGSVLEC*QLSPRL
Trigger: GAGTCTGGGTGACAACTGGCAGCACTCCAGTACTGA...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR GCA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGTTCTCAGTACTGGAGTaGTGCCAGTTGTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: FIERTYILGHEYSYSKSRFSVLE*CQLSPR
Trigger: TCTGGGTGACAACTGGCAGCACTCCAGTACTGAGAA...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACAGGGGTGATTTTGAATaGTGCACAGGGAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHRGDFE*CTGKGR
Trigger: CCTTCCCTTCCCTGTGCAGCATTCAAAATCACCCCT...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCTTCTGCAACCATATCTaGAGGCACATCATCATCCCG +
Preference number: 4 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVFCNHI*RHIIIP
Trigger: CGGGATGATGATGTGCCTGCAGATATGGTTGCAGAA...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR TCA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATTTGTGCACCAGGACCTaGTTCTTCTGCAACCATATC +
Preference number: 4 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYLCTRT*FFCNHI
Trigger: GATATGGTTGCAGAAGAATCAGGTCCTGGTGCACAA...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACTTGTGCACCAGGACCTaGTTCTTCTGCAACCATATC +
Preference number: 4 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHLCTRT*FFCNHI
Trigger: GATATGGTTGCAGAAGAATCAGGTCCTGGTGCACAA...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTTCTGGCAGTTTCTCCTaGAGATACTGTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFSGSFS*RYCSAG
Trigger: ACCTGCTGAACAGTATCTTCAGGAGAAACTGCCAGA...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCAGTGGGACATGCTCCTTaGCCACTAACACATACTGCA +
Preference number: 4 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSVGHAP*PLTHTA
Trigger: TGCAGTATGTGTTAGTGGTCAAGGAGCATGTCCCAC...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAGTGGGACATGCTCCTTaGCCACTAACACATACTGCA +
Preference number: 4 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGVGHAP*PLTHTA
Trigger: TGCAGTATGTGTTAGTGGTCAAGGAGCATGTCCCAC...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR TCA 90 bp ACTGAGTTACAAGAATACTTTTGTTTTACAGTGCATCCCTTCCTAGGAAGTCTCCCAGTCTGCCCATGGTaGATTTCACATCGAACCACT +
Preference number: 4 (lower is better)
Translates to: TELQEYFCFTVHPFLGSLPVCPW*ISHRTT
Trigger: AGTGGTTCGATGTGAAATTCACCATGGGCAGACTGG...GAGACTTCCTAGGAAGGGATGCACTGTAAAACAAAAGTATTCTTGTAACTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGACCAGTCTGCCCATGGTaGATTTCACATCGAACCACT +
Preference number: 4 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGPVCPW*ISHRTT
Trigger: AGTGGTTCGATGTGAAATTCACCATGGGCAGACTGG...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR GCA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCATGCCACTTTCCCAGGTaGTGCACCAATCATGGTGAT +
Preference number: 4 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSCHFPR*CTNHGD
Trigger: ATCACCATGATTGGTGCAGCACCTGGGAAAGTGGCA...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTTCAGTACTGGAGTGCTaGCAGTTGTCACCCAGACTC +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLSVLEC*QLSPRL
Trigger: GAGTCTGGGTGACAACTGGCAGCACTCCAGTACTGA...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGATTCTCAGTACTGGAGTaGTGCCAGTTGTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGFSVLE*CQLSPR
Trigger: TCTGGGTGACAACTGGCAGCACTCCAGTACTGAGAA...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR GCA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATAAACACCAACCTGCTTaGCACTGTGTATCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYKHQPA*HCVSGF
Trigger: GAAACCGGATACACAGTGGCAAGCAGGTTGGTGTTT...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCCCATACTGTTCTTTGTaGGACACGCTGTTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVPYCSL*DTLFFS
Trigger: CGAAAAGAACAGCGTGTCCCACAAAGAACAGTATGG...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTTCTGGCAGTTTCTCCTaGAGATACTGTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SFIERTYILGHEYSYSKSSGSFS*RYCSAG
Trigger: ACCTGCTGAACAGTATCTTCAGGAGAAACTGCCAGA...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACATAAGTCCATCAAAATaGGCCTCTTGTACCCCACCA +
Preference number: 4 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHISPSK*ASCTPP
Trigger: TGGTGGGGTACAAGAGGCTCATTTTGATGGACTTAT...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTTGCCATGATCAAATGTaGACACACCAACATCACGTC +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFCHDQM*THQHHV
Trigger: GACGTGATGTTGGTGTGTTCACATTTGATCATGGCA...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATTGTTGGGTCACTATTTaGGGTAATCCATACACCTGC +
Preference number: 4 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYCWVTI*GNPYTC
Trigger: GCAGGTGTATGGATTACCTCAAATAGTGACCCAACA...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACTCTACATCATGTCCCTaGTGGCACTTCTTAATGCAG +
Preference number: 4 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHSTSCP*WHFLMQ
Trigger: CTGCATTAAGAAGTGCCATCAGGGACATGATGTAGA...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATGTACATACTGGGACATaGGTACAGTTACAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYVHTGT*VQLQQV
Trigger: GACTTGCTGTAACTGTACTCATGTCCCAGTATGTAC...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACGTACATACTGGGACATaGGTACAGTTACAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHVHTGT*VQLQQV
Trigger: GACTTGCTGTAACTGTACTCATGTCCCAGTATGTAC...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCCACTCTTGCACGTTTTaGACGATGACCAAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVHSCTF*TMTKVF
Trigger: GAAAACTTTGGTCATCGTGCAAAACGTGCAAGAGTG...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGTTTTCCAGACACTCTTaGACGTTTTGCACGATGACC +
Preference number: 4 (lower is better)
Translates to: FIERTYILGHEYSYSKSRFSRHS*TFCTMT
Trigger: GGTCATCGTGCAAAACGTGCAAGAGTGTCTGGAAAA...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTTGCCACTTTCCCAGGTaGTGCACCAATCATGGTGAT +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLCHFPR*CTNHGD
Trigger: ATCACCATGATTGGTGCAGCACCTGGGAAAGTGGCA...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TGTCTCTTAACTCTAGGCACTAATCTCCTAAACCAGTTCAACTTGATAAGGAAATGCCACTTTCCCAGGTaGTGCACCAATCATGGTGAT +
Preference number: 4 (lower is better)
Translates to: CLLTLGTNLLNQFNLIRKCHFPR*CTNHGD
Trigger: ATCACCATGATTGGTGCAGCACCTGGGAAAGTGGCA...TTTCCTTATCAAGTTGAACTGGTTTAGGAGATTAGTGCCTAGAGTTAAGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR GCA 90 bp AAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAAAAGTATTGTAAACACCAACCTGCTTaGCACTGTGTATCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: KGLLTTADSKWLQKEKYCKHQPA*HCVSGF
Trigger: GAAACCGGATACACAGTGGCAAGCAGGTTGGTGTTT...ACAATACTTTTCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR GCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACGGTGATTTTGAATGCTaGACAGGGAAGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHGDFEC*TGKGRK
Trigger: TTTCCTTCCCTTCCCTGTGCAGCATTCAAAATCACC...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCTCTACGAAGTTGGTATaGACTATTTTGTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVSTKLV*TILCTR
Trigger: CCTGGTGCACAAAATAGTCCATACCAACTTCGTAGA...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGCCATACTGTTCTTTGTaGGACACGCTGTTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: FIERTYILGHEYSYSKSRPYCSL*DTLFFS
Trigger: CGAAAAGAACAGCGTGTCCCACAAAGAACAGTATGG...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCAGTTTCTTCTCAGTACTaGAGTGCTGCCAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSVSSQY*SAASCH
Trigger: GTGACAACTGGCAGCACTCCAGTACTGAGAAGAAAC...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTGCACGTTTTGCACGATaGCCAAAGTTTTCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFARFAR*PKFSVV
Trigger: AACTACAGAAAACTTTGGTCATCGTGCAAAACGTGC...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGCATGGGCAAATATTTTGTGGGACATGCTCCTTaGCCACTAACACATACTGCA +
Preference number: 4 (lower is better)
Translates to: PCVSIFNTVSSCSMGKYFVGHAP*PLTHTA
Trigger: TGCAGTATGTGTTAGTGGTCAAGGAGCATGTCCCAC...AAAATATTTGCCCATGCTACAGGAAGAGACTGTATTAAAAATGGATACACAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp AAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAAAAGTATTGTTGCCATGATCAAATGTaGACACACCAACATCACGTC +
Preference number: 4 (lower is better)
Translates to: KGLLTTADSKWLQKEKYCCHDQM*THQHHV
Trigger: GACGTGATGTTGGTGTGTTCACATTTGATCATGGCA...ACAATACTTTTCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR TCA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGATGTTGGGTCACTATTTaGGGTAATCCATACACCTGC +
Preference number: 4 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGCWVTI*GNPYTC
Trigger: GCAGGTGTATGGATTACCTCAAATAGTGACCCAACA...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR TCA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGCCAGCTTTGAGATCCTaGGTCAATATATTGCCACTT +
Preference number: 4 (lower is better)
Translates to: FIERTYILGHEYSYSKSRPALRS*VNILPL
Trigger: AAGTGGCAATATATTGACTCAGGATCTCAAAGCTGG...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATTTTCCAGGTTCAGGATaGATCATAGGGCGAGTATAT +
Preference number: 4 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYFPGSG*IIGRVY
Trigger: ATATACTCGCCCTATGATGCATCCTGAACCTGGAAA...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATGCACCTTTATACAACTaGTGGAAACTCTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYAPLYN*WKLSFQ
Trigger: CTGGAAAGAGAGTTTCCAGCAGTTGTATAAAGGTGC...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTGCACCTTTATACAACTaGTGGAAACTCTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFAPLYN*WKLSFQ
Trigger: CTGGAAAGAGAGTTTCCAGCAGTTGTATAAAGGTGC...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGAATTATAACTTTGTCTaGCACTTTCCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FIERTYILGHEYSYSKSRNYNFV*HFPRCC
Trigger: GCAGCACCTGGGAAAGTGGCAGACAAAGTTATAATT...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp CCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGCATGGGCAAATATTTTTTCTCAGTACTGGAGTaGTGCCAGTTGTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: PCVSIFNTVSSCSMGKYFFSVLE*CQLSPR
Trigger: TCTGGGTGACAACTGGCAGCACTCCAGTACTGAGAA...AAAATATTTGCCCATGCTACAGGAAGAGACTGTATTAAAAATGGATACACAAGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACGCTGATGAGAACACCTaGTTGAGCATTCCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHADENT*LSIPEN
Trigger: ATTTTCAGGAATGCTCAAGCAGGTGTTCTCATCAGC...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAAGGCTTACTGACAACTaGAGACTCAAAGTGGCTACA +
Preference number: 4 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGRLTDN*RLKVAT
Trigger: TGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCT...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CCA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCATGTTCAGCAAATCCTaGCTTTACATGTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVMFSKS*LYMCTF
Trigger: AAAGGTGCACATGTAAAGCCAGGATTTGCTGAACAT...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp TGTCTCTTAACTCTAGGCACTAATCTCCTAAACCAGTTCAACTTGATAAGGAAAGTTTCTTCTCAGTACTaGAGTGCTGCCAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: CLLTLGTNLLNQFNLIRKVSSQY*SAASCH
Trigger: GTGACAACTGGCAGCACTCCAGTACTGAGAAGAAAC...TTTCCTTATCAAGTTGAACTGGTTTAGGAGATTAGTGCCTAGAGTTAAGAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR TCA 90 bp TGTCTCTTAACTCTAGGCACTAATCTCCTAAACCAGTTCAACTTGATAAGGAAAATAAGTCCATCAAAATaGGCCTCTTGTACCCCACCA +
Preference number: 4 (lower is better)
Translates to: CLLTLGTNLLNQFNLIRKISPSK*ASCTPP
Trigger: TGGTGGGGTACAAGAGGCTCATTTTGATGGACTTAT...TTTCCTTATCAAGTTGAACTGGTTTAGGAGATTAGTGCCTAGAGTTAAGAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR TCA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATCTTCGGATGATACAGTaGTCAATAATAGGGCTACAA +
Preference number: 4 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYLRMIQ*SIIGLQ
Trigger: TTGTAGCCCTATTATTGATCACTGTATCATCCGAAG...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGCTTCGGATGATACAGTaGTCAATAATAGGGCTACAA +
Preference number: 4 (lower is better)
Translates to: FIERTYILGHEYSYSKSRLRMIQ*SIIGLQ
Trigger: TTGTAGCCCTATTATTGATCACTGTATCATCCGAAG...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTTGCCATGATCAAATGTaGACACACCAACATCACGTC +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLCHDQM*THQHHV
Trigger: GACGTGATGTTGGTGTGTTCACATTTGATCATGGCA...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATCGGTTGTTAAAAATCTaGTTGCCTTCTAGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYRLLKI*LPSSVA
Trigger: TGCAACACTAGAAGGCAATCAGATTTTTAACAACCG...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTCCAGCTTTGAGATCCTaGGTCAATATATTGCCACTT +
Preference number: 4 (lower is better)
Translates to: SFIERTYILGHEYSYSKSPALRS*VNILPL
Trigger: AAGTGGCAATATATTGACTCAGGATCTCAAAGCTGG...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp ACTGAGTTACAAGAATACTTTTGTTTTACAGTGCATCCCTTCCTAGGAAGTCTCCACTCTTGCACGTTTTaGACGATGACCAAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: TELQEYFCFTVHPFLGSLHSCTF*TMTKVF
Trigger: GAAAACTTTGGTCATCGTGCAAAACGTGCAAGAGTG...GAGACTTCCTAGGAAGGGATGCACTGTAAAACAAAAGTATTCTTGTAACTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp CACATAAATGGGGGAGGAAAAGCTATGAAACTGTATAGGGCTGTATATATACTTTTTTCCAGACACTCTTaGACGTTTTGCACGATGACC +
Preference number: 4 (lower is better)
Translates to: HINGGGKAMKLYRAVYILFSRHS*TFCTMT
Trigger: GGTCATCGTGCAAAACGTGCAAGAGTGTCTGGAAAA...AAGTATATATACAGCCCTATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAGCACCTTTATACAACTaGTGGAAACTCTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGAPLYN*WKLSFQ
Trigger: CTGGAAAGAGAGTTTCCAGCAGTTGTATAAAGGTGC...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR GCA 90 bp ACTGAGTTACAAGAATACTTTTGTTTTACAGTGCATCCCTTCCTAGGAAGTCTCTCCTGGCTTTACATGTaGACCTTTATACAACTGCTG +
Preference number: 4 (lower is better)
Translates to: TELQEYFCFTVHPFLGSLSWLYM*TFIQLL
Trigger: CAGCAGTTGTATAAAGGTGCACATGTAAAGCCAGGA...GAGACTTCCTAGGAAGGGATGCACTGTAAAACAAAAGTATTCTTGTAACTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGATCCTGGCTTTACATGTaGACCTTTATACAACTGCTG +
Preference number: 4 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGSWLYM*TFIQLL
Trigger: CAGCAGTTGTATAAAGGTGCACATGTAAAGCCAGGA...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR GCA 90 bp AAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAAAAGTATTGTAATTATAACTTTGTCTaGCACTTTCCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KGLLTTADSKWLQKEKYCNYNFV*HFPRCC
Trigger: GCAGCACCTGGGAAAGTGGCAGACAAAGTTATAATT...ACAATACTTTTCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR GCA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGACCACTAACACATACTaGAGAACCAACTGTACATGT +
Preference number: 4 (lower is better)
Translates to: FIERTYILGHEYSYSKSRTTNTY*RTNCTC
Trigger: ACATGTACAGTTGGTTCTGCAGTATGTGTTAGTGGT...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTTCACTGATGTTACAGTaGTTGATGGTGGGACATGCT +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLSLMLQ*LMVGHA
Trigger: AGCATGTCCCACCATCAAGCACTGTAACATCAGTGA...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TGTCTCTTAACTCTAGGCACTAATCTCCTAAACCAGTTCAACTTGATAAGGAAATCACTGATGTTACAGTaGTTGATGGTGGGACATGCT +
Preference number: 4 (lower is better)
Translates to: CLLTLGTNLLNQFNLIRKSLMLQ*LMVGHA
Trigger: AGCATGTCCCACCATCAAGCACTGTAACATCAGTGA...TTTCCTTATCAAGTTGAACTGGTTTAGGAGATTAGTGCCTAGAGTTAAGAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR GCA 90 bp CCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGCATGGGCAAATATTTTAAACACCAACCTGCTTaGCACTGTGTATCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: PCVSIFNTVSSCSMGKYFKHQPA*HCVSGF
Trigger: GAAACCGGATACACAGTGGCAAGCAGGTTGGTGTTT...AAAATATTTGCCCATGCTACAGGAAGAGACTGTATTAAAAATGGATACACAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCAGCTGATGAGAACACCTaGTTGAGCATTCCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSADENT*LSIPEN
Trigger: ATTTTCAGGAATGCTCAAGCAGGTGTTCTCATCAGC...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTATGTTCAGCAAATCCTaGCTTTACATGTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFMFSKS*LYMCTF
Trigger: AAAGGTGCACATGTAAAGCCAGGATTTGCTGAACAT...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTGTAATCTCTAAGCAGTaGTGTGCATTGTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: SFIERTYILGHEYSYSKSVISKQ*CALWCC
Trigger: ACAACACCACAATGCACACCACTGCTTAGAGATTAC...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp ACTGAGTTACAAGAATACTTTTGTTTTACAGTGCATCCCTTCCTAGGAAGTCTCGTAATCTCTAAGCAGTaGTGTGCATTGTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: TELQEYFCFTVHPFLGSLVISKQ*CALWCC
Trigger: ACAACACCACAATGCACACCACTGCTTAGAGATTAC...GAGACTTCCTAGGAAGGGATGCACTGTAAAACAAAAGTATTCTTGTAACTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp AAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAAAAGTATTGTGTAATCTCTAAGCAGTaGTGTGCATTGTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: KGLLTTADSKWLQKEKYCVISKQ*CALWCC
Trigger: ACAACACCACAATGCACACCACTGCTTAGAGATTAC...ACAATACTTTTCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CCA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCGTTATGCCGAACAATTaGACAACTGTTTGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVVMPNN*TTVCPN
Trigger: ATTAGGACAAACAGTTGTCCAATTGTTCGGCATAAC...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp CCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGCATGGGCAAATATTTTGTTTCTTCTCAGTACTaGAGTGCTGCCAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: PCVSIFNTVSSCSMGKYFVSSQY*SAASCH
Trigger: GTGACAACTGGCAGCACTCCAGTACTGAGAAGAAAC...AAAATATTTGCCCATGCTACAGGAAGAGACTGTATTAAAAATGGATACACAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCTGTAGAAATCATGCATaGGATAGCTGGTATAACTTG +
Preference number: 4 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVCRNHA*DSWYNL
Trigger: CAAGTTATACCAGCTATCCCATGCATGATTTCTACA...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACTGGCATTTCGATCTGTaGTGTTACAAGTATGACATC +
Preference number: 4 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHWHFDL*CYKYDI
Trigger: GATGTCATACTTGTAACACCACAGATCGAAATGCCA...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp AAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAAAAGTATTGTCTTCGGATGATACAGTaGTCAATAATAGGGCTACAA +
Preference number: 4 (lower is better)
Translates to: KGLLTTADSKWLQKEKYCLRMIQ*SIIGLQ
Trigger: TTGTAGCCCTATTATTGATCACTGTATCATCCGAAG...ACAATACTTTTCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR TCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTCTGTTTGTCCTAATTTaGATTCCTGCTAATGCATTG +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFLFVLI*IPANAL
Trigger: CAATGCATTAGCAGGAATTCAAATTAGGACAAACAG...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACCTGTTTGTCCTAATTTaGATTCCTGCTAATGCATTG +
Preference number: 4 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHLFVLI*IPANAL
Trigger: CAATGCATTAGCAGGAATTCAAATTAGGACAAACAG...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTAGTGTTGCAGTTGCGTaGTTTGTAATTTCAATACCT +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFSVAVA*FVISIP
Trigger: AGGTATTGAAATTACAAATCACGCAACTGCAACACT...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGCATGGGCAAATATTTTTCTACATCATGTCCCTaGTGGCACTTCTTAATGCAG +
Preference number: 4 (lower is better)
Translates to: PCVSIFNTVSSCSMGKYFSTSCP*WHFLMQ
Trigger: CTGCATTAAGAAGTGCCATCAGGGACATGATGTAGA...AAAATATTTGCCCATGCTACAGGAAGAGACTGTATTAAAAATGGATACACAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000434234.5
CDS-3UTR TCA 90 bp ATGCACATTTATCCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGCATGTCTACATCATGTCCCTaGTGGCACTTCTTAATGCAG +
Preference number: 4 (lower is better)
Translates to: MHIYPCVSIFNTVSSCSMSTSCP*WHFLMQ
Trigger: CTGCATTAAGAAGTGCCATCAGGGACATGATGTAGA...CATGCTACAGGAAGAGACTGTATTAAAAATGGATACACAAGGATAAATGTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434234.5
CDS-3UTR TCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTCTTCATAGTGTCAACTaGCCTTGTGTATCCATTTTT +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFLHSVN*PCVSIF
Trigger: AAAAATGGATACACAAGGTCAGTTGACACTATGAAG...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTTTCTGCAACCATATCTaGAGGCACATCATCATTTTT +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFFCNHI*RHIIIF
Trigger: AAAAATGATGATGTGCCTGCAGATATGGTTGCAGAA...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402508.5
CDS-3UTR GCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTTTTACATACACAAGCTaGTCTACAAAGATCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFFTYTS*STKILF
Trigger: GAACAGGATCTTTGTAGAGCAGCTTGTGTATGTAAA...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTTCCTGGCTTTACATGTaGACCTTTATACAACTGCTG +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLSWLYM*TFIQLL
Trigger: CAGCAGTTGTATAAAGGTGCACATGTAAAGCCAGGA...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTAATTATAACTTTGTCTaGCACTTTCCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLNYNFV*HFPRCC
Trigger: GCAGCACCTGGGAAAGTGGCAGACAAAGTTATAATT...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTACCACTAACACATACTaGAGAACCAACTGTACATGT +
Preference number: 4 (lower is better)
Translates to: SFIERTYILGHEYSYSKSTTNTY*RTNCTC
Trigger: ACATGTACAGTTGGTTCTGCAGTATGTGTTAGTGGT...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACGGTAATCCATACACCTaGAAAGTTGTTTGCATAGAT +
Preference number: 4 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHGNPYT*KVVCID
Trigger: ATCTATGCAAACAACTTTGCAGGTGTATGGATTACC...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTGGTAATCCATACACCTaGAAAGTTGTTTGCATAGAT +
Preference number: 4 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFGNPYT*KVVCID
Trigger: ATCTATGCAAACAACTTTGCAGGTGTATGGATTACC...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTCTCTTTCCAGGGATTTaGATGTTCATACTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLLFPGI*MFILFW
Trigger: CCAGAAGAGTATGAACATCCAAATCCCTGGAAAGAG...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp TGTCTCTTAACTCTAGGCACTAATCTCCTAAACCAGTTCAACTTGATAAGGAAACTCTTTCCAGGGATTTaGATGTTCATACTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: CLLTLGTNLLNQFNLIRKLFPGI*MFILFW
Trigger: CCAGAAGAGTATGAACATCCAAATCCCTGGAAAGAG...TTTCCTTATCAAGTTGAACTGGTTTAGGAGATTAGTGCCTAGAGTTAAGAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CCA 90 bp AAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAAAAGTATTGTATGTTCAGCAAATCCTaGCTTTACATGTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: KGLLTTADSKWLQKEKYCMFSKS*LYMCTF
Trigger: AAAGGTGCACATGTAAAGCCAGGATTTGCTGAACAT...ACAATACTTTTCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CCA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGTGTAGAAATCATGCATaGGATAGCTGGTATAACTTG +
Preference number: 4 (lower is better)
Translates to: FIERTYILGHEYSYSKSRCRNHA*DSWYNL
Trigger: CAAGTTATACCAGCTATCCCATGCATGATTTCTACA...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTTGGCATTTCGATCTGTaGTGTTACAAGTATGACATC +
Preference number: 4 (lower is better)
Translates to: SFIERTYILGHEYSYSKSWHFDL*CYKYDI
Trigger: GATGTCATACTTGTAACACCACAGATCGAAATGCCA...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACTGCACCAATCATGGTaGTTGGAGATTCAATATATA +
Preference number: 4 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSLHQSW*LEIQYI
Trigger: TATATATTGAATCTCCAATCACCATGATTGGTGCAG...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGACTGCACCAATCATGGTaGTTGGAGATTCAATATATA +
Preference number: 4 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGLHQSW*LEIQYI
Trigger: TATATATTGAATCTCCAATCACCATGATTGGTGCAG...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR TCA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGACTGTTTGTCCTAATTTaGATTCCTGCTAATGCATTG +
Preference number: 4 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGLFVLI*IPANAL
Trigger: CAATGCATTAGCAGGAATTCAAATTAGGACAAACAG...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR TCA 90 bp ACTGAGTTACAAGAATACTTTTGTTTTACAGTGCATCCCTTCCTAGGAAGTCTCTTCCTTAAGATTGGATaGCTATTAGTGCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: TELQEYFCFTVHPFLGSLFLKIG*LLVLMR
Trigger: TCTCATCAGCACTAATAGTCATCCAATCTTAAGGAA...GAGACTTCCTAGGAAGGGATGCACTGTAAAACAAAAGTATTCTTGTAACTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGTGTTGCAGTTGCGTaGTTTGTAATTTCAATACCT +
Preference number: 4 (lower is better)
Translates to: SFIERTYILGHEYSYSKSSVAVA*FVISIP
Trigger: AGGTATTGAAATTACAAATCACGCAACTGCAACACT...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTTTTACATACACAAGCTaGTCTACAAAGATCCTGTTC +
Preference number: 4 (lower is better)
Translates to: SFIERTYILGHEYSYSKSFTYTS*STKILF
Trigger: GAACAGGATCTTTGTAGAGCAGCTTGTGTATGTAAA...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TGTCTCTTAACTCTAGGCACTAATCTCCTAAACCAGTTCAACTTGATAAGGAAAACCACTAACACATACTaGAGAACCAACTGTACATGT +
Preference number: 4 (lower is better)
Translates to: CLLTLGTNLLNQFNLIRKTTNTY*RTNCTC
Trigger: ACATGTACAGTTGGTTCTGCAGTATGTGTTAGTGGT...TTTCCTTATCAAGTTGAACTGGTTTAGGAGATTAGTGCCTAGAGTTAAGAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR GCA 90 bp AAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAAAAGTATTGTGGTAATCCATACACCTaGAAAGTTGTTTGCATAGAT +
Preference number: 4 (lower is better)
Translates to: KGLLTTADSKWLQKEKYCGNPYT*KVVCID
Trigger: ATCTATGCAAACAACTTTGCAGGTGTATGGATTACC...ACAATACTTTTCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR GCA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGTTCCTGCTAATGCATTaGCATAAATGTCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: FIERTYILGHEYSYSKSRFLLMH*HKCHFL
Trigger: AAGGAAATGACATTTATGGCAATGCATTAGCAGGAA...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACGTTTTTCTACGAAGTTaGTATGGACTATTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHVFLRS*YGLFCA
Trigger: TGCACAAAATAGTCCATACCAACTTCGTAGAAAAAC...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp CCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGCATGGGCAAATATTTTCTCTTTCCAGGGATTTaGATGTTCATACTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PCVSIFNTVSSCSMGKYFLFPGI*MFILFW
Trigger: CCAGAAGAGTATGAACATCCAAATCCCTGGAAAGAG...AAAATATTTGCCCATGCTACAGGAAGAGACTGTATTAAAAATGGATACACAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTGTTATGCCGAACAATTaGACAACTGTTTGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: SFIERTYILGHEYSYSKSVMPNN*TTVCPN
Trigger: ATTAGGACAAACAGTTGTCCAATTGTTCGGCATAAC...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp AAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAAAAGTATTGTGTTATGCCGAACAATTaGACAACTGTTTGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: KGLLTTADSKWLQKEKYCVMPNN*TTVCPN
Trigger: ATTAGGACAAACAGTTGTCCAATTGTTCGGCATAAC...ACAATACTTTTCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CCA 90 bp CTAGTGAGGATGCACATTTATCCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGGCATTTCGATCTGTaGTGTTACAAGTATGACATC +
Preference number: 4 (lower is better)
Translates to: LVRMHIYPCVSIFNTVSSWHFDL*CYKYDI
Trigger: GATGTCATACTTGTAACACCACAGATCGAAATGCCA...GGAAGAGACTGTATTAAAAATGGATACACAAGGATAAATGTGCATCCTCACTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434234.5
CDS-3UTR CCA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACATTACTACTGCAAATTaGACTGCATTCAATGCTAGT +
Preference number: 4 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHITTAN*TAFNAS
Trigger: ACTAGCATTGAATGCAGTCCAATTTGCAGTAGTAAT...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp CACATAAATGGGGGAGGAAAAGCTATGAAACTGTATAGGGCTGTATATATACTTCTGCACCAATCATGGTaGTTGGAGATTCAATATATA +
Preference number: 4 (lower is better)
Translates to: HINGGGKAMKLYRAVYILLHQSW*LEIQYI
Trigger: TATATATTGAATCTCCAATCACCATGATTGGTGCAG...AAGTATATATACAGCCCTATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTTTCCTTAAGATTGGATaGCTATTAGTGCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLFLKIG*LLVLMR
Trigger: TCTCATCAGCACTAATAGTCATCCAATCTTAAGGAA...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR TCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTCTTCATAGTGTCAACTaGCCTTGTGTATCCATTTTT +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLLHSVN*PCVSIF
Trigger: AAAAATGGATACACAAGGTCAGTTGACACTATGAAG...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTTTCCTGCTAATGCATTaGCATAAATGTCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: SFIERTYILGHEYSYSKSFLLMH*HKCHFL
Trigger: AAGGAAATGACATTTATGGCAATGCATTAGCAGGAA...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCATCGTTTCCACAAAATTaGATCATTAGCAAGTTCACT +
Preference number: 4 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSSFPQN*IISKFT
Trigger: AGTGAACTTGCTAATGATCCAATTTTGTGGAAACGA...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp CTAGTGAGGATGCACATTTATCCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGAAATCATGCATaGGATAGCTGGTATAACTTG +
Preference number: 4 (lower is better)
Translates to: LVRMHIYPCVSIFNTVSSCRNHA*DSWYNL
Trigger: CAAGTTATACCAGCTATCCCATGCATGATTTCTACA...GGAAGAGACTGTATTAAAAATGGATACACAAGGATAAATGTGCATCCTCACTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434234.5
CDS-3UTR CCA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTGTTATGATGTTACAATaGCAGGACTTTTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: SFIERTYILGHEYSYSKSVMMLQ*QDFFFR
Trigger: CCTAAAGAAAAAGTCCTGCCATTGTAACATCATAAC...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTAAAGAACGTACATACTaGGACATGAGTACAGTTACA +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLKERTY*DMSTVT
Trigger: TGTAACTGTACTCATGTCCCAGTATGTACGTTCTTT...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR GCA 90 bp TGTCTCTTAACTCTAGGCACTAATCTCCTAAACCAGTTCAACTTGATAAGGAAATTCCTGCTAATGCATTaGCATAAATGTCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: CLLTLGTNLLNQFNLIRKFLLMH*HKCHFL
Trigger: AAGGAAATGACATTTATGGCAATGCATTAGCAGGAA...TTTCCTTATCAAGTTGAACTGGTTTAGGAGATTAGTGCCTAGAGTTAAGAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR GCA 90 bp CCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGCATGGGCAAATATTTTCCTGAGTCAATATATTaGCACTTTCTTTTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: PCVSIFNTVSSCSMGKYFPESIY*HFLFGS
Trigger: GCTACCAAAAAGAAAGTGGCAATATATTGACTCAGG...AAAATATTTGCCCATGCTACAGGAAGAGACTGTATTAAAAATGGATACACAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTGTTTTTCTACGAAGTTaGTATGGACTATTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLVFLRS*YGLFCA
Trigger: TGCACAAAATAGTCCATACCAACTTCGTAGAAAAAC...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp CCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGCATGGGCAAATATTTTAAAGAACGTACATACTaGGACATGAGTACAGTTACA +
Preference number: 4 (lower is better)
Translates to: PCVSIFNTVSSCSMGKYFKERTY*DMSTVT
Trigger: TGTAACTGTACTCATGTCCCAGTATGTACGTTCTTT...AAAATATTTGCCCATGCTACAGGAAGAGACTGTATTAAAAATGGATACACAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp GTGAGGATGCACATTTATCCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAAAACTGATAATGGTTaGATCCAGCTTTTCACACAA +
Preference number: 4 (lower is better)
Translates to: VRMHIYPCVSIFNTVSSCKTDNG*IQLFTQ
Trigger: TTGTGTGAAAAGCTGGATCCAACCATTATCAGTTTT...ACAGGAAGAGACTGTATTAAAAATGGATACACAAGGATAAATGTGCATCCTCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434234.5
CDS-3UTR CCA 90 bp CCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGCATGGGCAAATATTTTTCGTTTCCACAAAATTaGATCATTAGCAAGTTCACT +
Preference number: 4 (lower is better)
Translates to: PCVSIFNTVSSCSMGKYFSFPQN*IISKFT
Trigger: AGTGAACTTGCTAATGATCCAATTTTGTGGAAACGA...AAAATATTTGCCCATGCTACAGGAAGAGACTGTATTAAAAATGGATACACAAGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CCA 90 bp ATGCACATTTATCCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGCATGGTTATGATGTTACAATaGCAGGACTTTTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: MHIYPCVSIFNTVSSCSMVMMLQ*QDFFFR
Trigger: CCTAAAGAAAAAGTCCTGCCATTGTAACATCATAAC...CATGCTACAGGAAGAGACTGTATTAAAAATGGATACACAAGGATAAATGTGCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434234.5
CDS GCA 90 bp GGCGGCTGCGGCGGCGGCTGCTGCGGGGGCTGCTGCTGCTGTTGCTaGACCGGGCGCGGCCGCGACACTCGCCTGGGTCTCCGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: GGCGGGCCGGCCCCC*TGRGRDTRLGLRLA
Trigger: CGCCAACCGGAGACCCAGGCGAGTGTCGCGGCCGCGCCCGGTGCAGCAACAGCAGCAGCAGCCCCCGCAGCAGCCGCCGCCGCAGCCGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS GCA 90 bp TGGGGCGGCTGCGGCGGCGGCTGCTGCGGGGGCTGCTGCTGCTGTTaGTGCACCGGGCGCGGCCGCGACACTCGCCTGGGTCTCCGGTTG +
Preference number: 5 (lower is better)
Translates to: WGGCGGGCCGGCCCC*CTGRGRDTRLGLRL
Trigger: CAACCGGAGACCCAGGCGAGTGTCGCGGCCGCGCCCGGTGCAGCAACAGCAGCAGCAGCCCCCGCAGCAGCCGCCGCCGCAGCCGCCCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS CCA 90 bp CTCGCCGACGTTGTTCCGCTCCTGAGGCAGCGGCGGAGGCGGCGGTaGCGGCGGCGGAGGCTGCTGCTGCTGCTGCTGCTGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: LADVVPLLRQRRRRR*RRRRLLLLLLLRRR
Trigger: CCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCCTCCGCCGCCGCCACCGCCGCCTCCGCCGCTGCCTCAGGAGCGGAACAACGTCGGCGAG
78% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS TCA 90 bp TCTGCAGGCACATCATCATCCCGCTCGCCGACGTTGTTCCGCTCCTaGGGCAGCGGCGGAGGCGGCGGTGGCGGCGGCGGAGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SAGTSSSRSPTLFRS*GSGGGGGGGGGGCC
Trigger: GCAGCAGCCTCCGCCGCCGCCACCGCCGCCTCCGCCGCTGCCTCAGGAGCGGAACAACGTCGGCGAGCGGGATGATGATGTGCCTGCAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403359.8
ENST00000492225.5
ENST00000683894.1
CDS CCA 90 bp GTTGCTGCACCGGGCGCGGCCGCGACACTCGCCTGGGTCTCCGGTTaGCGGCTCGGACGGAGTTCATTTGCCGGGCTGAGGTGGCGGCGT +
Preference number: 5 (lower is better)
Translates to: VAAPGAAATLAWVSG*RLGRSSFAGLRWRR
Trigger: ACGCCGCCACCTCAGCCCGGCAAATGAACTCCGTCCGAGCCGCCAACCGGAGACCCAGGCGAGTGTCGCGGCCGCGCCCGGTGCAGCAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS TCA 90 bp CCTGGGTCTCCGGTTGGCGGCTCGGACGGAGTTCATTTGCCGGGCTaGGGTGGCGGCGTTGGCGGAGGGACACACACACGCACACGCACA +
Preference number: 5 (lower is better)
Translates to: PGSPVGGSDGVHLPG*GGGVGGGTHTRTRT
Trigger: TGTGCGTGTGCGTGTGTGTGTCCCTCCGCCAACGCCGCCACCTCAGCCCGGCAAATGAACTCCGTCCGAGCCGCCAACCGGAGACCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS CCA 90 bp GTCTCCGGTTGGCGGCTCGGACGGAGTTCATTTGCCGGGCTGAGGTaGCGGCGTTGGCGGAGGGACACACACACGCACACGCACAGCGAG +
Preference number: 5 (lower is better)
Translates to: VSGWRLGRSSFAGLR*RRWRRDTHTHTHSE
Trigger: CTCGCTGTGCGTGTGCGTGTGTGTGTCCCTCCGCCAACGCCGCCACCTCAGCCCGGCAAATGAACTCCGTCCGAGCCGCCAACCGGAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS GCA 90 bp ACCTTTCCTCCTCCTCCTCGTCAGCCCTGTCGCCGCTGCTTCTGCTaGTGCTCCGTGGCAGGAGGAGCCATTGACACCGCCGGAGCCTCC +
Preference number: 5 (lower is better)
Translates to: TFPPPPRQPCRRCFC*CSVAGGAIDTAGAS
Trigger: GGAGGCTCCGGCGGTGTCAATGGCTCCTCCTGCCACGGAGCAGCAGCAGAAGCAGCGGCGACAGGGCTGACGAGGAGGAGGAGGAAAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS GCA 90 bp TTTCCTCCTCCTCCTCGTCAGCCCTGTCGCCGCTGCTTCTGCTGCTaGTCCGTGGCAGGAGGAGCCATTGACACCGCCGGAGCCTCCACT +
Preference number: 5 (lower is better)
Translates to: FPPPPRQPCRRCFCC*SVAGGAIDTAGAST
Trigger: AGTGGAGGCTCCGGCGGTGTCAATGGCTCCTCCTGCCACGGAGCAGCAGCAGAAGCAGCGGCGACAGGGCTGACGAGGAGGAGGAGGAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS GCA 90 bp CTTAAAGGAACCTTTCCTCCTCCTCCTCGTCAGCCCTGTCGCCGCTaGTTCTGCTGCTGCTCCGTGGCAGGAGGAGCCATTGACACCGCC +
Preference number: 5 (lower is better)
Translates to: LKGTFPPPPRQPCRR*FCCCSVAGGAIDTA
Trigger: GGCGGTGTCAATGGCTCCTCCTGCCACGGAGCAGCAGCAGAAGCAGCGGCGACAGGGCTGACGAGGAGGAGGAGGAAAGGTTCCTTTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS CCA 90 bp ATCTGCAGGCACATCATCATCACTAGAAAGAGGCAGACTAAACCATaGAAGGCGGCAGAAAAGGGAGAAATCACGCCGCTCGCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: ICRHIIITRKRQTKP*KAAEKGEITPLAFP
Trigger: GGGGAAGGCGAGCGGCGTGATTTCTCCCTTTTCTGCCGCCTTCCATGGTTTAGTCTGCCTCTTTCTAGTGATGATGATGTGCCTGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424163.2
ENST00000681999.1
ENST00000682975.1
ENST00000684085.1
CDS-3UTR CAA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGAAGGGCGTCCGCCGCTaGGGGATCCCGAGGCGAAGC +
Preference number: 5 (lower is better)
Translates to: FIERTYILGHEYSYSKSRKGVRR*GIPRRS
Trigger: GCTTCGCCTCGGGATCCCCAAGCGGCGGACGCCCTT...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR CAA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCGCTGAGGTGGCGGCGTaGGCGGAGGGACACACACAC +
Preference number: 5 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVAEVAA*AEGHTH
Trigger: GTGTGTGTGTCCCTCCGCCAACGCCGCCACCTCAGC...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS-3UTR CAA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACGCCTGGGTCTCCGGTaGGCGGCTCGGACGGAGTTC +
Preference number: 5 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSRLGLR*AARTEF
Trigger: GAACTCCGTCCGAGCCGCCAACCGGAGACCCAGGCG...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS GCA 90 bp CAGGCAATAGGGAAGCCTGAGGAGAGGGACAGAGATGGGAATGGCTaGTTGGTGGAACAGTCAGAACACACACAACGTTTACAGATGAAG +
Preference number: 5 (lower is better)
Translates to: QAIGKPEERDRDGNG*LVEQSEHTQRLQMK
Trigger: CTTCATCTGTAAACGTTGTGTGTGTTCTGACTGTTCCACCAAGCAGCCATTCCCATCTCTGTCCCTCTCCTCAGGCTTCCCTATTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682484.1
CDS GCA 90 bp CATAGTGGAAAGCAGAACGGTGGAAGTGAGCTCTTATGGCACATGTaGCAGTGGCTTCTGTCCTCACCTAGACCAAGGAAAGCTACATTC +
Preference number: 5 (lower is better)
Translates to: HSGKQNGGSELLWHM*QWLLSSPRPRKATF
Trigger: GAATGTAGCTTTCCTTGGTCTAGGTGAGGACAGAAGCCACTGGCACATGTGCCATAAGAGCTCACTTCCACCGTTCTGCTTTCCACTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492225.5
ENST00000682484.1
CDS CCA 90 bp TGTGACTCTCATAGTGGAAAGCAGAACGGTGGAAGTGAGCTCTTATaGCACATGTGCCAGTGGCTTCTGTCCTCACCTAGACCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: CDSHSGKQNGGSELL*HMCQWLLSSPRPRK
Trigger: TTTCCTTGGTCTAGGTGAGGACAGAAGCCACTGGCACATGTGCCATAAGAGCTCACTTCCACCGTTCTGCTTTCCACTATGAGAGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492225.5
ENST00000682484.1
CDS GCA 90 bp CCTGCTTGCCACTGTGTATCCGGTTTCTTCTCAGTACTGGAGTGCTaGCAGTTGTCACCCAGACTCCAGCTAGAGTGTTACTATAAACTT +
Preference number: 5 (lower is better)
Translates to: PACHCVSGFFSVLEC*QLSPRLQLECYYKL
Trigger: AAGTTTATAGTAACACTCTAGCTGGAGTCTGGGTGACAACTGGCAGCACTCCAGTACTGAGAAGAAACCGGATACACAGTGGCAAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682484.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS GCA 90 bp CAACCTGCTTGCCACTGTGTATCCGGTTTCTTCTCAGTACTGGAGTaGTGCCAGTTGTCACCCAGACTCCAGCTAGAGTGTTACTATAAA +
Preference number: 5 (lower is better)
Translates to: QPACHCVSGFFSVLE*CQLSPRLQLECYYK
Trigger: TTTATAGTAACACTCTAGCTGGAGTCTGGGTGACAACTGGCAGCACTCCAGTACTGAGAAGAAACCGGATACACAGTGGCAAGCAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682484.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS TCA 90 bp TCACAGTCACTGATGTTACAGTGCTTGATGGTGGGACATGCTCCTTaGCCACTAACACATACTGCAGAACCAACTGTACATGTACTTCGG +
Preference number: 5 (lower is better)
Translates to: SQSLMLQCLMVGHAP*PLTHTAEPTVHVLR
Trigger: CCGAAGTACATGTACAGTTGGTTCTGCAGTATGTGTTAGTGGTCAAGGAGCATGTCCCACCATCAAGCACTGTAACATCAGTGACTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS TCA 90 bp AACACAGACTTCCACTCTCCAAGTATGAAGGATCATATTGGCAGCTaGTGTGACTCTCATAGTGGAAAGCAGAACGGTGGAAGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: NTDFHSPSMKDHIGS*CDSHSGKQNGGSEL
Trigger: GAGCTCACTTCCACCGTTCTGCTTTCCACTATGAGAGTCACATCAGCTGCCAATATGATCCTTCATACTTGGAGAGTGGAAGTCTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492225.5
ENST00000682484.1
CDS GCA 90 bp CTAGCACTCCATGTCCATTGTCATAAAAATAAACACCAACCTGCTTaGCACTGTGTATCCGGTTTCTTCTCAGTACTGGAGTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LALHVHCHKNKHQPA*HCVSGFFSVLECCQ
Trigger: CTGGCAGCACTCCAGTACTGAGAAGAAACCGGATACACAGTGGCAAGCAGGTTGGTGTTTATTTTTATGACAATGGACATGGAGTGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682484.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS GCA 90 bp TCCTGTTGGTTCCACCCTTTTTATAGAGATACGGTCTTACTACATTaGCTAGGCTGGTTTCCAACTCCAGACTCAAGTGATACTCCTGCC +
Preference number: 5 (lower is better)
Translates to: SCWFHPFYRDTVLLH*LGWFPTPDSSDTPA
Trigger: GGCAGGAGTATCACTTGAGTCTGGAGTTGGAAACCAGCCTAGGCAATGTAGTAAGACCGTATCTCTATAAAAAGGGTGGAACCAACAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS TCA 90 bp AGTTTTTCTACGAAGTTGGTATGGACTATTTTGTGCACCAGGACCTaGTTCTTCTGCAACCATATCTGCAGGCACATCATCATCCCGCTC +
Preference number: 5 (lower is better)
Translates to: SFSTKLVWTILCTRT*FFCNHICRHIIIPL
Trigger: GAGCGGGATGATGATGTGCCTGCAGATATGGTTGCAGAAGAATCAGGTCCTGGTGCACAAAATAGTCCATACCAACTTCGTAGAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403359.8
ENST00000492225.5
ENST00000683894.1
CDS TCA 90 bp ATCTGTAAGGGGCAGGCACTATGGAACTTTTGCCTCAATGCAAAGTaGGTTGACCTTTATGAATACCAAACCAGGCACATCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: ICKGQALWNFCLNAK*VDLYEYQTRHILAS
Trigger: TGAAGCCAAGATGTGCCTGGTTTGGTATTCATAAAGGTCAACTCACTTTGCATTGAGGCAAAAGTTCCATAGTGCCTGCCCCTTACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS-3UTR CAA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACATCAAAATGAGCCTCTaGTACCCCACCAAGGGCATC +
Preference number: 5 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHIKMSL*YPTKGI
Trigger: GATGCCCTTGGTGGGGTACAAGAGGCTCATTTTGAT...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTGGTGGGACATGCTCCTaGACCACTAACACATACTGC +
Preference number: 5 (lower is better)
Translates to: SFIERTYILGHEYSYSKSGGTCS*TTNTYC
Trigger: GCAGTATGTGTTAGTGGTCAAGGAGCATGTCCCACC...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCAGGTGGGACATGCTCCTaGACCACTAACACATACTGC +
Preference number: 5 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSGGTCS*TTNTYC
Trigger: GCAGTATGTGTTAGTGGTCAAGGAGCATGTCCCACC...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp AAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAAAAGTATTGTGGTGGGACATGCTCCTaGACCACTAACACATACTGC +
Preference number: 5 (lower is better)
Translates to: KGLLTTADSKWLQKEKYCGGTCS*TTNTYC
Trigger: GCAGTATGTGTTAGTGGTCAAGGAGCATGTCCCACC...ACAATACTTTTCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS GCA 90 bp AACATTTTCACAGTCACTGATGTTACAGTGCTTGATGGTGGGACATaGTCCTTGACCACTAACACATACTGCAGAACCAACTGTACATGT +
Preference number: 5 (lower is better)
Translates to: NIFTVTDVTVLDGGT*SLTTNTYCRTNCTC
Trigger: ACATGTACAGTTGGTTCTGCAGTATGTGTTAGTGGTCAAGGAGCATGTCCCACCATCAAGCACTGTAACATCAGTGACTGTGAAAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS-3UTR CAA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCATTTTCCAGACACTCTaGCACGTTTTGCACGATGAC +
Preference number: 5 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVIFQTL*HVLHDD
Trigger: GTCATCGTGCAAAACGTGCAAGAGTGTCTGGAAAAT...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAATCAAAATGAGCCTCTaGTACCCCACCAAGGGCATC +
Preference number: 5 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGIKMSL*YPTKGI
Trigger: GATGCCCTTGGTGGGGTACAAGAGGCTCATTTTGAT...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CAA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACGTGTGCATTGTGGTGTaGTGCAGATTTGTCATCAGG +
Preference number: 5 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHVCIVV*CRFVIR
Trigger: CCTGATGACAAATCTGCACAACACCACAATGCACAC...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACTGATGTTACAGTGCTaGATGGTGGGACATGCTCCT +
Preference number: 5 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSLMLQC*MVGHAP
Trigger: AGGAGCATGTCCCACCATCAAGCACTGTAACATCAG...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS TCA 90 bp AGTTTTTCTACGAAGTTGGTATGGACTATTTTGTGCACCAGGACCTaGTTCTTCTGCAACCATATCTGCAGGCACATCATCATCACTAGA +
Preference number: 5 (lower is better)
Translates to: SFSTKLVWTILCTRT*FFCNHICRHIIITR
Trigger: TCTAGTGATGATGATGTGCCTGCAGATATGGTTGCAGAAGAATCAGGTCCTGGTGCACAAAATAGTCCATACCAACTTCGTAGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424163.2
ENST00000681999.1
ENST00000682975.1
ENST00000684085.1
CDS-3UTR CAA 90 bp CACATAAATGGGGGAGGAAAAGCTATGAAACTGTATAGGGCTGTATATATACTTATCAAAATGAGCCTCTaGTACCCCACCAAGGGCATC +
Preference number: 5 (lower is better)
Translates to: HINGGGKAMKLYRAVYILIKMSL*YPTKGI
Trigger: GATGCCCTTGGTGGGGTACAAGAGGCTCATTTTGAT...AAGTATATATACAGCCCTATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp AAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAAAAGTATTGTGTGTGCATTGTGGTGTaGTGCAGATTTGTCATCAGG +
Preference number: 5 (lower is better)
Translates to: KGLLTTADSKWLQKEKYCVCIVV*CRFVIR
Trigger: CCTGATGACAAATCTGCACAACACCACAATGCACAC...ACAATACTTTTCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CAA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTCTGATGTTACAGTGCTaGATGGTGGGACATGCTCCT +
Preference number: 5 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLLMLQC*MVGHAP
Trigger: AGGAGCATGTCCCACCATCAAGCACTGTAACATCAG...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TGTCTCTTAACTCTAGGCACTAATCTCCTAAACCAGTTCAACTTGATAAGGAAACTGATGTTACAGTGCTaGATGGTGGGACATGCTCCT +
Preference number: 5 (lower is better)
Translates to: CLLTLGTNLLNQFNLIRKLMLQC*MVGHAP
Trigger: AGGAGCATGTCCCACCATCAAGCACTGTAACATCAG...TTTCCTTATCAAGTTGAACTGGTTTAGGAGATTAGTGCCTAGAGTTAAGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CAA 90 bp CTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACTTGTTGCGTCTAATTTaGGGGTTGCTTCCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: LDVMVHAYTFRLFYTHCHLLRLI*GLLPVL
Trigger: AAGGACTGGAAGCAACCCCAAAATTAGACGCAACAA...GTGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp ACTGAGTTACAAGAATACTTTTGTTTTACAGTGCATCCCTTCCTAGGAAGTCTCTGTCCTCCCCAGATTTaGTTGCGTCTAATTTTGGGG +
Preference number: 5 (lower is better)
Translates to: TELQEYFCFTVHPFLGSLCPPQI*LRLILG
Trigger: CCCCAAAATTAGACGCAACAAAATCTGGGGAGGACA...GAGACTTCCTAGGAAGGGATGCACTGTAAAACAAAAGTATTCTTGTAACTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS TCA 90 bp AGTTTTTCTACGAAGTTGGTATGGACTATTTTGTGCACCAGGACCTaGTTCTTCTGCAACCATATCTGCAGGCACATCATCATTATGCAT +
Preference number: 5 (lower is better)
Translates to: SFSTKLVWTILCTRT*FFCNHICRHIIIMH
Trigger: ATGCATAATGATGATGTGCCTGCAGATATGGTTGCAGAAGAATCAGGTCCTGGTGCACAAAATAGTCCATACCAACTTCGTAGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682451.1
CDS-3UTR CAA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTCCTCCATACTGTTCTTaGTGGGACACGCTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLPPYCS*WDTLFF
Trigger: AAAGAACAGCGTGTCCCACAAAGAACAGTATGGAGG...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGACACTCTTGCACGTTTaGCACGATGACCAAAGTTTT +
Preference number: 5 (lower is better)
Translates to: FIERTYILGHEYSYSKSRTLLHV*HDDQSF
Trigger: AAAACTTTGGTCATCGTGCAAAACGTGCAAGAGTGT...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCAATTTTCCAGACACTCTaGCACGTTTTGCACGATGAC +
Preference number: 5 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSIFQTL*HVLHDD
Trigger: GTCATCGTGCAAAACGTGCAAGAGTGTCTGGAAAAT...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTTCTCTTTCCAGGGATTaGGATGTTCATACTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFSLSRD*DVHTLL
Trigger: CAGAAGAGTATGAACATCCAAATCCCTGGAAAGAGA...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATTCTCTTTCCAGGGATTaGGATGTTCATACTCTTCTG +
Preference number: 5 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYSLSRD*DVHTLL
Trigger: CAGAAGAGTATGAACATCCAAATCCCTGGAAAGAGA...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTTGGTGTTGTGCAGATTaGTCATCAGGGTTAAACCTT +
Preference number: 5 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFWCCAD*SSGLNL
Trigger: AAGGTTTAACCCTGATGACAAATCTGCACAACACCA...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTGTGTGCATTGTGGTGTaGTGCAGATTTGTCATCAGG +
Preference number: 5 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLVCIVV*CRFVIR
Trigger: CCTGATGACAAATCTGCACAACACCACAATGCACAC...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGATTGTTGCGTCTAATTTaGGGGTTGCTTCCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGLLRLI*GLLPVL
Trigger: AAGGACTGGAAGCAACCCCAAAATTAGACGCAACAA...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CAA 90 bp CACATAAATGGGGGAGGAAAAGCTATGAAACTGTATAGGGCTGTATATATACTTTGTCCTCCCCAGATTTaGTTGCGTCTAATTTTGGGG +
Preference number: 5 (lower is better)
Translates to: HINGGGKAMKLYRAVYILCPPQI*LRLILG
Trigger: CCCCAAAATTAGACGCAACAAAATCTGGGGAGGACA...AAGTATATATACAGCCCTATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TGTCTCTTAACTCTAGGCACTAATCTCCTAAACCAGTTCAACTTGATAAGGAAATGTCCTCCCCAGATTTaGTTGCGTCTAATTTTGGGG +
Preference number: 5 (lower is better)
Translates to: CLLTLGTNLLNQFNLIRKCPPQI*LRLILG
Trigger: CCCCAAAATTAGACGCAACAAAATCTGGGGAGGACA...TTTCCTTATCAAGTTGAACTGGTTTAGGAGATTAGTGCCTAGAGTTAAGAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CAA 90 bp CTTCACTTCTGTCCCTTCAAGTCTTTACACAGTAATGCTAAAACACCCAGCTTTGATGAGAACACCTGCTaGAGCATTCCTGAAAATATC +
Preference number: 5 (lower is better)
Translates to: LHFCPFKSLHSNAKTPSFDENTC*SIPENI
Trigger: GATATTTTCAGGAATGCTCAAGCAGGTGTTCTCATC...AAAGCTGGGTGTTTTAGCATTACTGTGTAAAGACTTGAAGGGACAGAAGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS TCA 90 bp CACCCATCATATTTCACTTTACTTTCAACCCCCATATTAAATCAATaGCCCAGTCCTGTTGGTTCCACCCTTTTTATAGAGATACGGTCT +
Preference number: 5 (lower is better)
Translates to: HPSYFTLLSTPILNQ*PSPVGSTLFIEIRS
Trigger: AGACCGTATCTCTATAAAAAGGGTGGAACCAACAGGACTGGGTCATTGATTTAATATGGGGGTTGAAAGTAAAGTGAAATATGATGGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS TCA 90 bp AGTTTTTCTACGAAGTTGGTATGGACTATTTTGTGCACCAGGACCTaGTTCTTCTGCAACCATATCTGCAGGCACATCATCATCAATTAT +
Preference number: 5 (lower is better)
Translates to: SFSTKLVWTILCTRT*FFCNHICRHIIINY
Trigger: ATAATTGATGATGATGTGCCTGCAGATATGGTTGCAGAAGAATCAGGTCCTGGTGCACAAAATAGTCCATACCAACTTCGTAGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684712.1
CDS GCA 90 bp CCTCTTCCCTTACTTTCAGTTTCCTCTAGACTTTTGTTTACGATGTaGTCCACTCCATCACACTATACATTTTATGGATGTGCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: PLPLLSVSSRLLFTM*STPSHYTFYGCAVS
Trigger: TGAAACAGCACATCCATAAAATGTATAGTGTGATGGAGTGGAGCACATCGTAAACAAAAGTCTAGAGGAAACTGAAAGTAAGGGAAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS GCA 90 bp TCTGCAGGCACATCATCATCAATTATGTTGCACAAGATCTCCAACTaGCTTGAAACATCACATTCTTTCAAGCAACATATAGCAAACTGC +
Preference number: 5 (lower is better)
Translates to: SAGTSSSIMLHKISN*LETSHSFKQHIANC
Trigger: GCAGTTTGCTATATGTTGCTTGAAAGAATGTGATGTTTCAAGGCAGTTGGAGATCTTGTGCAACATAATTGATGATGATGTGCCTGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684712.1
CDS CCA 90 bp ATGTGCACCTTTATACAACTGCTGGAAACTCTCTTTCCAGGGATTTaGATGTTCATACTCTTCTGGATTAATCTGGTAGAATTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: MCTFIQLLETLFPGI*MFILFWINLVEFSR
Trigger: CCTGGAAAATTCTACCAGATTAATCCAGAAGAGTATGAACATCCAAATCCCTGGAAAGAGAGTTTCCAGCAGTTGTATAAAGGTGCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CCA 90 bp CACTTTACTTTCAACCCCCATATTAAATCAATGACCCAGTCCTGTTaGTTCCACCCTTTTTATAGAGATACGGTCTTACTACATTGCCTA +
Preference number: 5 (lower is better)
Translates to: HFTFNPHIKSMTQSC*FHPFYRDTVLLHCL
Trigger: TAGGCAATGTAGTAAGACCGTATCTCTATAAAAAGGGTGGAACCAACAGGACTGGGTCATTGATTTAATATGGGGGTTGAAAGTAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS-3UTR CAA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTACACTCTTGCACGTTTaGCACGATGACCAAAGTTTT +
Preference number: 5 (lower is better)
Translates to: SFIERTYILGHEYSYSKSTLLHV*HDDQSF
Trigger: AAAACTTTGGTCATCGTGCAAAACGTGCAAGAGTGT...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCCTCTTCCTTTATATCTaGCAGGGTTACTGTAGAAAT +
Preference number: 5 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVLFLYI*QGYCRN
Trigger: ATTTCTACAGTAACCCTGCAAGATATAAAGGAAGAG...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp ACTGAGTTACAAGAATACTTTTGTTTTACAGTGCATCCCTTCCTAGGAAGTCTCTGGTGTTGTGCAGATTaGTCATCAGGGTTAAACCTT +
Preference number: 5 (lower is better)
Translates to: TELQEYFCFTVHPFLGSLWCCAD*SSGLNL
Trigger: AAGGTTTAACCCTGATGACAAATCTGCACAACACCA...GAGACTTCCTAGGAAGGGATGCACTGTAAAACAAAAGTATTCTTGTAACTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TTACAAAAGCAATTGGTACCCATGTCCATAAAGGCAGCAACAAAGCTGCTTGTCACTCCAGCCATTGCATaGTCAAATATTTCATTGTCT +
Preference number: 5 (lower is better)
Translates to: LQKQLVPMSIKAATKLLVTPAIA*SNISLS
Trigger: AGACAATGAAATATTTGACAATGCAATGGCTGGAGT...GACAAGCAGCTTTGTTGCTGCCTTTATGGACATGGGTACCAATTGCTTTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATTCCAGACTCCAGCCATaGCATTGTCAAATATTTCAT +
Preference number: 5 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYSRLQP*HCQIFH
Trigger: ATGAAATATTTGACAATGCAATGGCTGGAGTCTGGA...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCAGATGAGAACACCTGCTaGAGCATTCCTGAAAATATC +
Preference number: 5 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSDENTC*SIPENI
Trigger: GATATTTTCAGGAATGCTCAAGCAGGTGTTCTCATC...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS TCA 90 bp TATTTCTGGGTTCTGTCCCTCATTTCCCTCTGCATACTCTTTGGGTaGTCTTACATCTTGCAACTATTGCATATACACTGTTGCTTTTTA +
Preference number: 5 (lower is better)
Translates to: YFWVLSLISLCILFG*SYILQLLHIHCCFL
Trigger: TAAAAAGCAACAGTGTATATGCAATAGTTGCAAGATGTAAGATCACCCAAAGAGTATGCAGAGGGAAATGAGGGACAGAACCCAGAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465204.5
ENST00000681999.1
ENST00000684085.1
CDS TCA 90 bp TGTGCTACATACCTATCATGTCTAATAAACTCTACATCATGTCCCTaGTGGCACTTCTTAATGCAGTTCACACATATGGCATTTCGATCT +
Preference number: 5 (lower is better)
Translates to: CATYLSCLINSTSCP*WHFLMQFTHMAFRS
Trigger: AGATCGAAATGCCATATGTGTGAACTGCATTAAGAAGTGCCATCAGGGACATGATGTAGAGTTTATTAGACATGATAGGTATGTAGCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683894.1
CDS GCA 90 bp ACATCGAACCACTGTAGGGTTAGCATAGGCTTTTACTTCAAAGCCTaGTATCCTATTTCTGTGTATATTGCAACTTTCAAAGTAACCCAT +
Preference number: 5 (lower is better)
Translates to: TSNHCRVSIGFYFKA*YPISVYIATFKVTH
Trigger: ATGGGTTACTTTGAAAGTTGCAATATACACAGAAATAGGATAGCAGGCTTTGAAGTAAAAGCCTATGCTAACCCTACAGTGGTTCGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CCA 90 bp TCCTTTATATCTTGCAGGGTTACTGTAGAAATGTTCAGCAAATCCTaGCTTTACATGTGCACCTTTATACAACTGCTGGAAACTCTCTTT +
Preference number: 5 (lower is better)
Translates to: SFISCRVTVEMFSKS*LYMCTFIQLLETLF
Trigger: AAAGAGAGTTTCCAGCAGTTGTATAAAGGTGCACATGTAAAGCCAGGATTTGCTGAACATTTCTACAGTAACCCTGCAAGATATAAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CCA 90 bp ATAGGGCTACAATTTACTGTAATCTCTAAGCAGTGGTGTGCATTGTaGTGTTGTGCAGATTTGTCATCAGGGTTAAACCTTATTGTCATA +
Preference number: 5 (lower is better)
Translates to: IGLQFTVISKQWCAL*CCADLSSGLNLIVI
Trigger: TATGACAATAAGGTTTAACCCTGATGACAAATCTGCACAACACCACAATGCACACCACTGCTTAGAGATTACAGTAAATTGTAGCCCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CCA 90 bp TTAATATTTCTGGGTTCTGTCCCTCATTTCCCTCTGCATACTCTTTaGGTGATCTTACATCTTGCAACTATTGCATATACACTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: LIFLGSVPHFPLHTL*VILHLATIAYTLLL
Trigger: AAGCAACAGTGTATATGCAATAGTTGCAAGATGTAAGATCACCCAAAGAGTATGCAGAGGGAAATGAGGGACAGAACCCAGAAATATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465204.5
ENST00000681999.1
ENST00000684085.1
CDS-3UTR CAA 90 bp TACCCACTGTCACCAATACACATAAATGGGGGAGGAAAAGCTATGAAACTGTATAGTTTTTCTACGAAGTaGGTATGGACTATTTTGTGC +
Preference number: 5 (lower is better)
Translates to: YPLSPIHINGGGKAMKLYSFSTK*VWTILC
Trigger: GCACAAAATAGTCCATACCAACTTCGTAGAAAAACT...ATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTGTATTGGTGACAGTGGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TGTCTCTTAACTCTAGGCACTAATCTCCTAAACCAGTTCAACTTGATAAGGAAATCTCTTTCCAGGGATTaGGATGTTCATACTCTTCTG +
Preference number: 5 (lower is better)
Translates to: CLLTLGTNLLNQFNLIRKSLSRD*DVHTLL
Trigger: CAGAAGAGTATGAACATCCAAATCCCTGGAAAGAGA...TTTCCTTATCAAGTTGAACTGGTTTAGGAGATTAGTGCCTAGAGTTAAGAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CAA 90 bp TGTCTCTTAACTCTAGGCACTAATCTCCTAAACCAGTTCAACTTGATAAGGAAATGGTGTTGTGCAGATTaGTCATCAGGGTTAAACCTT +
Preference number: 5 (lower is better)
Translates to: CLLTLGTNLLNQFNLIRKWCCAD*SSGLNL
Trigger: AAGGTTTAACCCTGATGACAAATCTGCACAACACCA...TTTCCTTATCAAGTTGAACTGGTTTAGGAGATTAGTGCCTAGAGTTAAGAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CAA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACTCTTCTATTACTCCTaGTCCCTTTTCATGCACATA +
Preference number: 5 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSLFYYS*SLFMHI
Trigger: TATGTGCATGAAAAGGGACAAGGAGTAATAGAAGAG...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGACTCTTCTATTACTCCTaGTCCCTTTTCATGCACATA +
Preference number: 5 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGLFYYS*SLFMHI
Trigger: TATGTGCATGAAAAGGGACAAGGAGTAATAGAAGAG...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CAA 90 bp AAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGAAAAGTATTGTTCCAGACTCCAGCCATaGCATTGTCAAATATTTCAT +
Preference number: 5 (lower is better)
Translates to: KGLLTTADSKWLQKEKYCSRLQP*HCQIFH
Trigger: ATGAAATATTTGACAATGCAATGGCTGGAGTCTGGA...ACAATACTTTTCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CAA 90 bp TTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTAGGTTTCTTTTTGGTAGCTaGAGCTTCATAGTGTCAACT +
Preference number: 5 (lower is better)
Translates to: FIERTYILGHEYSYSKSRFLFGS*SFIVST
Trigger: AGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAA...CCTAGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTGGGCTGTATATATACTaGTCTCAGCTTAATGCAGGA +
Preference number: 5 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLGLYIY*SQLNAG
Trigger: TCCTGCATTAAGCTGAGACAAGTATATATACAGCCC...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS TCA 90 bp TCACAGAAAAACCTATCATGTCTAATAAACTCTACATCATGTCCCTaGTGGCACTTCTTAATGCAGTTCACACATATGGCATTTCGATCT +
Preference number: 5 (lower is better)
Translates to: SQKNLSCLINSTSCP*WHFLMQFTHMAFRS
Trigger: AGATCGAAATGCCATATGTGTGAACTGCATTAAGAAGTGCCATCAGGGACATGATGTAGAGTTTATTAGACATGATAGGTTTTTCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000405808.5
ENST00000434234.5
ENST00000465204.5
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000684085.1
ENST00000684523.1
ENST00000684712.1
CDS CCA 90 bp CTAATCTTGATTATTTCCACTACACCTCAAGTGCTATTGCTAAGATaGATTCCAAACTCCTTACTGCATATGGAAAACCTCATGATTTGG +
Preference number: 5 (lower is better)
Translates to: LILIISTTPQVLLLR*IPNSLLHMENLMIW
Trigger: CCAAATCATGAGGTTTTCCATATGCAGTAAGGAGTTTGGAATCCATCTTAGCAATAGCACTTGAGGTGTAGTGGAAATAATCAAGATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS-3UTR CAA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCACTCTTCCTTTATATCTaGCAGGGTTACTGTAGAAAT +
Preference number: 5 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSLFLYI*QGYCRN
Trigger: ATTTCTACAGTAACCCTGCAAGATATAAAGGAAGAG...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TCTAGATGTTATGGTACATGCATACACTTTCAGGCTGTTTTATACCCACTGTCATTTTCAATTATAACTTaGTCTGCCACTTTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: SRCYGTCIHFQAVLYPLSFSIIT*SATFPG
Trigger: ACCTGGGAAAGTGGCAGACAAAGTTATAATTGAAAA...TGACAGTGGGTATAAAACAGCCTGAAAGTGTATGCATGTACCATAACATCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGATTTTCAATTATAACTTaGTCTGCCACTTTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGFSIIT*SATFPG
Trigger: ACCTGGGAAAGTGGCAGACAAAGTTATAATTGAAAA...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CAA 90 bp ACTGAGTTACAAGAATACTTTTGTTTTACAGTGCATCCCTTCCTAGGAAGTCTCCCAGCTAACGCATTATaGGAAATTTCATTATCCTCA +
Preference number: 5 (lower is better)
Translates to: TELQEYFCFTVHPFLGSLPANAL*EISLSS
Trigger: TGAGGATAATGAAATTTCCAATAATGCGTTAGCTGG...GAGACTTCCTAGGAAGGGATGCACTGTAAAACAAAAGTATTCTTGTAACTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp CTATCTTTAAAAAGGCTTACTGACAACTGCAGACTCAAAGTGGCTACAAAAGGACCAGCTAACGCATTATaGGAAATTTCATTATCCTCA +
Preference number: 5 (lower is better)
Translates to: LSLKRLTDNCRLKVATKGPANAL*EISLSS
Trigger: TGAGGATAATGAAATTTCCAATAATGCGTTAGCTGG...TCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCCTTTTTAAAGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CAA 90 bp CACATAAATGGGGGAGGAAAAGCTATGAAACTGTATAGGGCTGTATATATACTTCTCTTCTATTACTCCTaGTCCCTTTTCATGCACATA +
Preference number: 5 (lower is better)
Translates to: HINGGGKAMKLYRAVYILLFYYS*SLFMHI
Trigger: TATGTGCATGAAAAGGGACAAGGAGTAATAGAAGAG...AAGTATATATACAGCCCTATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TCTTTCATAGAAAGAACGTACATACTGGGACATGAGTACAGTTACAGCAAGTCTTTTCTTTTTGGTAGCTaGAGCTTCATAGTGTCAACT +
Preference number: 5 (lower is better)
Translates to: SFIERTYILGHEYSYSKSFLFGS*SFIVST
Trigger: AGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAA...AGACTTGCTGTAACTGTACTCATGTCCCAGTATGTACGTTCTTTCTATGAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS TCA 90 bp AGGCACATCTTGGCTTCATTAATTCCACTCTCCAACAAACACAGTTaGAAACAGTTACAAAAGCAATACCCGTTTACTAAAGACATTTTC +
Preference number: 5 (lower is better)
Translates to: RHILASLIPLSNKHS*KQLQKQYPFTKDIF
Trigger: GAAAATGTCTTTAGTAAACGGGTATTGCTTTTGTAACTGTTTTCAACTGTGTTTGTTGGAGAGTGGAATTAATGAAGCCAAGATGTGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS GCA 90 bp CCTTTATTCCAGTTTCATCTGCTGCATAGTTTCCAATCAGTTAACTaGAACTCTTATCATGCCTCTTTCTCTAACAAACTACTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: PLFQFHLLHSFQSVN*NSYHASFSNKLLSE
Trigger: TTCTGAAAGTAGTTTGTTAGAGAAAGAGGCATGATAAGAGTTGCAGTTAACTGATTGGAAACTATGCAGCAGATGAAACTGGAATAAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465204.5
ENST00000681999.1
ENST00000684085.1
CDS-3UTR CAA 90 bp CACATAAATGGGGGAGGAAAAGCTATGAAACTGTATAGGGCTGTATATATACTTAGTTTTTCTACGAAGTaGGTATGGACTATTTTGTGC +
Preference number: 5 (lower is better)
Translates to: HINGGGKAMKLYRAVYILSFSTK*VWTILC
Trigger: GCACAAAATAGTCCATACCAACTTCGTAGAAAAACT...AAGTATATATACAGCCCTATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TGTCTCTTAACTCTAGGCACTAATCTCCTAAACCAGTTCAACTTGATAAGGAAACTCTTCCTTTATATCTaGCAGGGTTACTGTAGAAAT +
Preference number: 5 (lower is better)
Translates to: CLLTLGTNLLNQFNLIRKLFLYI*QGYCRN
Trigger: ATTTCTACAGTAACCCTGCAAGATATAAAGGAAGAG...TTTCCTTATCAAGTTGAACTGGTTTAGGAGATTAGTGCCTAGAGTTAAGAGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CAA 90 bp CACATAAATGGGGGAGGAAAAGCTATGAAACTGTATAGGGCTGTATATATACTTTTTTCAATTATAACTTaGTCTGCCACTTTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: HINGGGKAMKLYRAVYILFSIIT*SATFPG
Trigger: ACCTGGGAAAGTGGCAGACAAAGTTATAATTGAAAA...AAGTATATATACAGCCCTATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp CACATAAATGGGGGAGGAAAAGCTATGAAACTGTATAGGGCTGTATATATACTTCCAGCTAACGCATTATaGGAAATTTCATTATCCTCA +
Preference number: 5 (lower is better)
Translates to: HINGGGKAMKLYRAVYILPANAL*EISLSS
Trigger: TGAGGATAATGAAATTTCCAATAATGCGTTAGCTGG...AAGTATATATACAGCCCTATACAGTTTCATAGCTTTTCCTCCCCCATTTATGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp ATATATTGCCACTTTCTTTTTGGTAGCTTGAGCTTCATAGTGTCAACTGACCTTACTCCAGCCATTGCATaGTCAAATATTTCATTGTCT +
Preference number: 5 (lower is better)
Translates to: IYCHFLFGSLSFIVSTDLTPAIA*SNISLS
Trigger: AGACAATGAAATATTTGACAATGCAATGGCTGGAGT...AAGGTCAGTTGACACTATGAAGCTCAAGCTACCAAAAAGAAAGTGGCAATATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS-3UTR CAA 90 bp TGTCTCTTAACTCTAGGCACTAATCTCCTAAACCAGTTCAACTTGATAAGGAAAACTCCAGCCATTGCATaGTCAAATATTTCATTGTCT +
Preference number: 5 (lower is better)
Translates to: CLLTLGTNLLNQFNLIRKTPAIA*SNISLS
Trigger: AGACAATGAAATATTTGACAATGCAATGGCTGGAGT...TTTCCTTATCAAGTTGAACTGGTTTAGGAGATTAGTGCCTAGAGTTAAGAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493962.6
CDS-3UTR CAA 90 bp CCTTGTGTATCCATTTTTAATACAGTCTCTTCCTGTAGCATGGGCAAATATTTTTCCAGACTCCAGCCATaGCATTGTCAAATATTTCAT +
Preference number: 5 (lower is better)
Translates to: PCVSIFNTVSSCSMGKYFSRLQP*HCQIFH
Trigger: ATGAAATATTTGACAATGCAATGGCTGGAGTCTGGA...AAAATATTTGCCCATGCTACAGGAAGAGACTGTATTAAAAATGGATACACAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402508.5
ENST00000403359.8
CDS GCA 90 bp TACTATAATCATTTCCTGATGAGTTTCCTTTATTCCAGTTTCATCTaGTGCATAGTTTCCAATCAGTTAACTGCAACTCTTATCATGCCT +
Preference number: 5 (lower is better)
Translates to: YYNHFLMSFLYSSFI*CIVSNQLTATLIMP
Trigger: AGGCATGATAAGAGTTGCAGTTAACTGATTGGAAACTATGCAGCAGATGAAACTGGAATAAAGGAAACTCATCAGGAAATGATTATAGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465204.5
ENST00000681999.1
ENST00000684085.1
CDS CAA 90 bp CTGGGGCGGCTGCGGCGGCGGCTGCTGCGGGGGCTGCTGCTGCTGTaGCTGCACCGGGCGCGGCCGCGACACTCGCCTGGGTCTCCGGTT +
Preference number: 6 (lower is better)
Translates to: LGRLRRRLLRGLLLL*LHRARPRHSPGSPV
Trigger: AACCGGAGACCCAGGCGAGTGTCGCGGCCGCGCCCGGTGCAGCAACAGCAGCAGCAGCCCCCGCAGCAGCCGCCGCCGCAGCCGCCCCAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS GCA 72 bp TGCGGCGGCGGCTGCTGCGGGGGCTGCTGCTGCTGTTaGTGCACCGGGCGCGGCCGCGACACTCGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: CGGGCCGGCCCC*CTGRGRDTRLG
Trigger: ACCCAGGCGAGTGTCGCGGCCGCGCCCGGTGCAGCAACAGCAGCAGCAGCCCCCGCAGCAGCCGCCGCCGCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS CCA 72 bp GTTGTTCCGCTCCTGAGGCAGCGGCGGAGGCGGCGGTaGCGGCGGCGGAGGCTGCTGCTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: VVPLLRQRRRRR*RRRRLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAGCCTCCGCCGCCGCCACCGCCGCCTCCGCCGCTGCCTCAGGAGCGGAACAAC
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403359.8
ENST00000683894.1
CDS CAA 90 bp TGTTGCTGCACCGGGCGCGGCCGCGACACTCGCCTGGGTCTCCGGTaGGCGGCTCGGACGGAGTTCATTTGCCGGGCTGAGGTGGCGGCG +
Preference number: 6 (lower is better)
Translates to: CCCTGRGRDTRLGLR*AARTEFICRAEVAA
Trigger: CGCCGCCACCTCAGCCCGGCAAATGAACTCCGTCCGAGCCGCCAACCGGAGACCCAGGCGAGTGTCGCGGCCGCGCCCGGTGCAGCAACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS TCA 72 bp ACATCATCATCCCGCTCGCCGACGTTGTTCCGCTCCTaGGGCAGCGGCGGAGGCGGCGGTGGCGGCGGCGGA +
Preference number: 6 (lower is better)
Translates to: TSSSRSPTLFRS*GSGGGGGGGGG
Trigger: TCCGCCGCCGCCACCGCCGCCTCCGCCGCTGCCTCAGGAGCGGAACAACGTCGGCGAGCGGGATGATGATGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403359.8
ENST00000492225.5
ENST00000683894.1
CDS TCA 72 bp CCGGTTGGCGGCTCGGACGGAGTTCATTTGCCGGGCTaGGGTGGCGGCGTTGGCGGAGGGACACACACACGC +
Preference number: 6 (lower is better)
Translates to: PVGGSDGVHLPG*GGGVGGGTHTR
Trigger: GCGTGTGTGTGTCCCTCCGCCAACGCCGCCACCTCAGCCCGGCAAATGAACTCCGTCCGAGCCGCCAACCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS GCA 72 bp CTGGGTCTCCGGTTGGCGGCTCGGACGGAGTTCATTTaGCGGGCTGAGGTGGCGGCGTTGGCGGAGGGACAC +
Preference number: 6 (lower is better)
Translates to: LGLRLAARTEFI*RAEVAALAEGH
Trigger: GTGTCCCTCCGCCAACGCCGCCACCTCAGCCCGGCAAATGAACTCCGTCCGAGCCGCCAACCGGAGACCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS CCA 72 bp GCTGTTGCTGCACCGGGCGCGGCCGCGACACTCGCCTaGGTCTCCGGTTGGCGGCTCGGACGGAGTTCATTT +
Preference number: 6 (lower is better)
Translates to: AVAAPGAAATLA*VSGWRLGRSSF
Trigger: AAATGAACTCCGTCCGAGCCGCCAACCGGAGACCCAGGCGAGTGTCGCGGCCGCGCCCGGTGCAGCAACAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS CAA 90 bp TTGGCGGCTCGGACGGAGTTCATTTGCCGGGCTGAGGTGGCGGCGTaGGCGGAGGGACACACACACGCACACGCACAGCGAGCTTCGGGG +
Preference number: 6 (lower is better)
Translates to: LAARTEFICRAEVAA*AEGHTHAHAQRASG
Trigger: CCCCGAAGCTCGCTGTGCGTGTGCGTGTGTGTGTCCCTCCGCCAACGCCGCCACCTCAGCCCGGCAAATGAACTCCGTCCGAGCCGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS GCA 72 bp CCTCCTCGTCAGCCCTGTCGCCGCTGCTTCTGCTGCTaGTCCGTGGCAGGAGGAGCCATTGACACCGCCGGA +
Preference number: 6 (lower is better)
Translates to: PPRQPCRRCFCC*SVAGGAIDTAG
Trigger: TCCGGCGGTGTCAATGGCTCCTCCTGCCACGGAGCAGCAGCAGAAGCAGCGGCGACAGGGCTGACGAGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS GCA 72 bp CCTCCTCCTCGTCAGCCCTGTCGCCGCTGCTTCTGCTaGTGCTCCGTGGCAGGAGGAGCCATTGACACCGCC +
Preference number: 6 (lower is better)
Translates to: PPPRQPCRRCFC*CSVAGGAIDTA
Trigger: GGCGGTGTCAATGGCTCCTCCTGCCACGGAGCAGCAGCAGAAGCAGCGGCGACAGGGCTGACGAGGAGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS GCA 72 bp CCTCCTCCTCCTCGTCAGCCCTGTCGCCGCTGCTTCTaGTGCTGCTCCGTGGCAGGAGGAGCCATTGACACC +
Preference number: 6 (lower is better)
Translates to: PPPPRQPCRRCF*CCSVAGGAIDT
Trigger: GGTGTCAATGGCTCCTCCTGCCACGGAGCAGCAGCAGAAGCAGCGGCGACAGGGCTGACGAGGAGGAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS CAA 72 bp CGGACGGAGTTCATTTGCCGGGCTGAGGTGGCGGCGTaGGCGGAGGGACACACACACGCACACGCACAGCGA +
Preference number: 6 (lower is better)
Translates to: RTEFICRAEVAA*AEGHTHAHAQR
Trigger: TCGCTGTGCGTGTGCGTGTGTGTGTCCCTCCGCCAACGCCGCCACCTCAGCCCGGCAAATGAACTCCGTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403359.8
CDS GCA 72 bp TGCCACTGTGTATCCGGTTTCTTCTCAGTACTGGAGTaGTGCCAGTTGTCACCCAGACTCCAGCTAGAGTGT +
Preference number: 6 (lower is better)
Translates to: CHCVSGFFSVLE*CQLSPRLQLEC
Trigger: ACACTCTAGCTGGAGTCTGGGTGACAACTGGCAGCACTCCAGTACTGAGAAGAAACCGGATACACAGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682484.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS GCA 72 bp GGGAAGCCTGAGGAGAGGGACAGAGATGGGAATGGCTaGTTGGTGGAACAGTCAGAACACACACAACGTTTA +
Preference number: 6 (lower is better)
Translates to: GKPEERDRDGNG*LVEQSEHTQRL
Trigger: TAAACGTTGTGTGTGTTCTGACTGTTCCACCAAGCAGCCATTCCCATCTCTGTCCCTCTCCTCAGGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682484.1
CDS TCA 72 bp TTTCGATACTGTTGTGTCTCAGGCAATAGGGAAGCCTaGGGAGAGGGACAGAGATGGGAATGGCTGCTTGGT +
Preference number: 6 (lower is better)
Translates to: FRYCCVSGNREA*GEGQRWEWLLG
Trigger: ACCAAGCAGCCATTCCCATCTCTGTCCCTCTCCTCAGGCTTCCCTATTGCCTGAGACACAACAGTATCGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682484.1
CDS GCA 72 bp CACTGTGTATCCGGTTTCTTCTCAGTACTGGAGTGCTaGCAGTTGTCACCCAGACTCCAGCTAGAGTGTTAC +
Preference number: 6 (lower is better)
Translates to: HCVSGFFSVLEC*QLSPRLQLECY
Trigger: GTAACACTCTAGCTGGAGTCTGGGTGACAACTGGCAGCACTCCAGTACTGAGAAGAAACCGGATACACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682484.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CCA 72 bp AACGGTGGAAGTGAGCTCTTATGGCACATGTGCCAGTaGCTTCTGTCCTCACCTAGACCAAGGAAAGCTACA +
Preference number: 6 (lower is better)
Translates to: NGGSELLWHMCQ*LLSSPRPRKAT
Trigger: TGTAGCTTTCCTTGGTCTAGGTGAGGACAGAAGCCACTGGCACATGTGCCATAAGAGCTCACTTCCACCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492225.5
ENST00000682484.1
CDS CCA 72 bp CATAGTGGAAAGCAGAACGGTGGAAGTGAGCTCTTATaGCACATGTGCCAGTGGCTTCTGTCCTCACCTAGA +
Preference number: 6 (lower is better)
Translates to: HSGKQNGGSELL*HMCQWLLSSPR
Trigger: TCTAGGTGAGGACAGAAGCCACTGGCACATGTGCCATAAGAGCTCACTTCCACCGTTCTGCTTTCCACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492225.5
ENST00000682484.1
CDS CCA 72 bp AGCCTGAGGAGAGGGACAGAGATGGGAATGGCTGCTTaGTGGAACAGTCAGAACACACACAACGTTTACAGA +
Preference number: 6 (lower is better)
Translates to: SLRRGTEMGMAA*WNSQNTHNVYR
Trigger: TCTGTAAACGTTGTGTGTGTTCTGACTGTTCCACCAAGCAGCCATTCCCATCTCTGTCCCTCTCCTCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682484.1
CDS CAA 72 bp AAGCCTGAGGAGAGGGACAGAGATGGGAATGGCTGCTaGGTGGAACAGTCAGAACACACACAACGTTTACAG +
Preference number: 6 (lower is better)
Translates to: KPEERDRDGNGC*VEQSEHTQRLQ
Trigger: CTGTAAACGTTGTGTGTGTTCTGACTGTTCCACCAAGCAGCCATTCCCATCTCTGTCCCTCTCCTCAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682484.1
CDS CAA 90 bp GCAATAGGGAAGCCTGAGGAGAGGGACAGAGATGGGAATGGCTGCTaGGTGGAACAGTCAGAACACACACAACGTTTACAGATGAAGTTT +
Preference number: 6 (lower is better)
Translates to: AIGKPEERDRDGNGC*VEQSEHTQRLQMKF
Trigger: AAACTTCATCTGTAAACGTTGTGTGTGTTCTGACTGTTCCACCAAGCAGCCATTCCCATCTCTGTCCCTCTCCTCAGGCTTCCCTATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682484.1
CDS CCA 72 bp CTGGATGAGTGGGAAAAATCTGACTCAGTAACTTCTTaGGGTCCTCCTCCTGTTCACTCCCTGGGTATTAAT +
Preference number: 6 (lower is better)
Translates to: LDEWEKSDSVTS*GPPPVHSLGIN
Trigger: ATTAATACCCAGGGAGTGAACAGGAGGAGGACCCCAAGAAGTTACTGAGTCAGATTTTTCCCACTCATCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465204.5
ENST00000681999.1
ENST00000684085.1
CDS CAA 90 bp TTCACAGTCACTGATGTTACAGTGCTTGATGGTGGGACATGCTCCTaGACCACTAACACATACTGCAGAACCAACTGTACATGTACTTCG +
Preference number: 6 (lower is better)
Translates to: FTVTDVTVLDGGTCS*TTNTYCRTNCTCTS
Trigger: CGAAGTACATGTACAGTTGGTTCTGCAGTATGTGTTAGTGGTCAAGGAGCATGTCCCACCATCAAGCACTGTAACATCAGTGACTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS TCA 72 bp ACGAAGTTGGTATGGACTATTTTGTGCACCAGGACCTaGTTCTTCTGCAACCATATCTGCAGGCACATCATC +
Preference number: 6 (lower is better)
Translates to: TKLVWTILCTRT*FFCNHICRHII
Trigger: GATGATGTGCCTGCAGATATGGTTGCAGAAGAATCAGGTCCTGGTGCACAAAATAGTCCATACCAACTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000424163.2
ENST00000480038.1
ENST00000492225.5
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS TCA 72 bp TTCCACTCTCCAAGTATGAAGGATCATATTGGCAGCTaGTGTGACTCTCATAGTGGAAAGCAGAACGGTGGA +
Preference number: 6 (lower is better)
Translates to: FHSPSMKDHIGS*CDSHSGKQNGG
Trigger: TCCACCGTTCTGCTTTCCACTATGAGAGTCACATCAGCTGCCAATATGATCCTTCATACTTGGAGAGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492225.5
ENST00000682484.1
CDS TCA 72 bp GGGCAGGCACTATGGAACTTTTGCCTCAATGCAAAGTaGGTTGACCTTTATGAATACCAAACCAGGCACATC +
Preference number: 6 (lower is better)
Translates to: GQALWNFCLNAK*VDLYEYQTRHI
Trigger: GATGTGCCTGGTTTGGTATTCATAAAGGTCAACTCACTTTGCATTGAGGCAAAAGTTCCATAGTGCCTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS CAA 72 bp ACTGATGTTACAGTGCTTGATGGTGGGACATGCTCCTaGACCACTAACACATACTGCAGAACCAACTGTACA +
Preference number: 6 (lower is better)
Translates to: TDVTVLDGGTCS*TTNTYCRTNCT
Trigger: TGTACAGTTGGTTCTGCAGTATGTGTTAGTGGTCAAGGAGCATGTCCCACCATCAAGCACTGTAACATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS TCA 72 bp GGATTCCAAACTCCTTACTGCATATGGAAAACCTCATaGTTTGGGCCTTGCCCCTTCTGTAGCCTCAATTTT +
Preference number: 6 (lower is better)
Translates to: GFQTPYCIWKTS*FGPCPFCSLNF
Trigger: AAAATTGAGGCTACAGAAGGGGCAAGGCCCAAATCATGAGGTTTTCCATATGCAGTAAGGAGTTTGGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS TCA 72 bp TCAGTGAAAGGTAGTCACCCACCCAAATCAGAATCCTaGGCACCCATCATATTTCACTTTACTTTCAACCCC +
Preference number: 6 (lower is better)
Translates to: SVKGSHPPKSES*APIIFHFTFNP
Trigger: GGGGTTGAAAGTAAAGTGAAATATGATGGGTGCTCAGGATTCTGATTTGGGTGGGTGACTACCTTTCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS TCA 72 bp TGGTGGAACAGTCAGAACACACACAACGTTTACAGATaGAGTTTGTTATCTTGGGCGCAGTTAATGGTGTCC +
Preference number: 6 (lower is better)
Translates to: WWNSQNTHNVYR*SLLSWAQLMVS
Trigger: GGACACCATTAACTGCGCCCAAGATAACAAACTTCATCTGTAAACGTTGTGTGTGTTCTGACTGTTCCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682484.1
CDS GCA 72 bp ATTTGCATTTGGCAGCTCTGTGAATCTCTGTATACATaGATCTGTAAGGGGCAGGCACTATGGAACTTTTGC +
Preference number: 6 (lower is better)
Translates to: ICIWQLCESLYT*ICKGQALWNFC
Trigger: GCAAAAGTTCCATAGTGCCTGCCCCTTACAGATGCATGTATACAGAGATTCACAGAGCTGCCAAATGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS GCA 72 bp CATGTCCATTGTCATAAAAATAAACACCAACCTGCTTaGCACTGTGTATCCGGTTTCTTCTCAGTACTGGAG +
Preference number: 6 (lower is better)
Translates to: HVHCHKNKHQPA*HCVSGFFSVLE
Trigger: CTCCAGTACTGAGAAGAAACCGGATACACAGTGGCAAGCAGGTTGGTGTTTATTTTTATGACAATGGACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682484.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CCA 72 bp CTGGGTTCTGTCCCTCATTTCCCTCTGCATACTCTTTaGGTGATCTTACATCTTGCAACTATTGCATATACA +
Preference number: 6 (lower is better)
Translates to: LGSVPHFPLHTL*VILHLATIAYT
Trigger: TGTATATGCAATAGTTGCAAGATGTAAGATCACCCAAAGAGTATGCAGAGGGAAATGAGGGACAGAACCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465204.5
ENST00000681999.1
ENST00000684085.1
CDS TCA 72 bp AAGATTTTTAGAACCACTTCATCTGGCAGTTTCTCCTaGAGATACTGTTCAGCAGGTGCTGCTGATAGATCT +
Preference number: 6 (lower is better)
Translates to: KIFRTTSSGSFS*RYCSAGAADRS
Trigger: AGATCTATCAGCAGCACCTGCTGAACAGTATCTTCAGGAGAAACTGCCAGATGAAGTGGTTCTAAAAATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000424163.2
ENST00000480038.1
ENST00000492225.5
ENST00000681999.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CCA 72 bp TCTTGCAGGGTTACTGTAGAAATGTTCAGCAAATCCTaGCTTTACATGTGCACCTTTATACAACTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: SCRVTVEMFSKS*LYMCTFIQLLE
Trigger: TTCCAGCAGTTGTATAAAGGTGCACATGTAAAGCCAGGATTTGCTGAACATTTCTACAGTAACCCTGCAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CAA 72 bp GTACCTCTTCCCTTACTTTCAGTTTCCTCTAGACTTTaGTTTACGATGTGCTCCACTCCATCACACTATACA +
Preference number: 6 (lower is better)
Translates to: VPLPLLSVSSRL*FTMCSTPSHYT
Trigger: TGTATAGTGTGATGGAGTGGAGCACATCGTAAACAAAAGTCTAGAGGAAACTGAAAGTAAGGGAAGAGGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS CAA 90 bp TCCCTGTCTCTAATCTTGATTATTTCCACTACACCTCAAGTGCTATaGCTAAGATGGATTCCAAACTCCTTACTGCATATGGAAAACCTC +
Preference number: 6 (lower is better)
Translates to: SLSLILIISTTPQVL*LRWIPNSLLHMENL
Trigger: GAGGTTTTCCATATGCAGTAAGGAGTTTGGAATCCATCTTAGCAATAGCACTTGAGGTGTAGTGGAAATAATCAAGATTAGAGACAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS TCA 72 bp AAGATTTTTAGAACCACTTCATCTGGCAGTTTCTCCTaGAGATACTGTTCAGCAGGTGCTGATAGATCTTGT +
Preference number: 6 (lower is better)
Translates to: KIFRTTSSGSFS*RYCSAGADRSC
Trigger: ACAAGATCTATCAGCACCTGCTGAACAGTATCTTCAGGAGAAACTGCCAGATGAAGTGGTTCTAAAAATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682451.1
CDS GCA 72 bp ATTAGCAAGTTCACTGAAGCGTTTACATACACAAGCTaGTCTACAAAGATCCTGTTCCAGCAAGTAAGAGAA +
Preference number: 6 (lower is better)
Translates to: ISKFTEAFTYTS*STKILFQQVRE
Trigger: TTCTCTTACTTGCTGGAACAGGATCTTTGTAGAGCAGCTTGTGTATGTAAACGCTTCAGTGAACTTGCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000424163.2
ENST00000480038.1
ENST00000492225.5
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CCA 72 bp TTCAACCCCCATATTAAATCAATGACCCAGTCCTGTTaGTTCCACCCTTTTTATAGAGATACGGTCTTACTA +
Preference number: 6 (lower is better)
Translates to: FNPHIKSMTQSC*FHPFYRDTVLL
Trigger: TAGTAAGACCGTATCTCTATAAAAAGGGTGGAACCAACAGGACTGGGTCATTGATTTAATATGGGGGTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS CAA 72 bp TCTAAGCAGTGGTGTGCATTGTGGTGTTGTGCAGATTaGTCATCAGGGTTAAACCTTATTGTCATATATCCA +
Preference number: 6 (lower is better)
Translates to: SKQWCALWCCAD*SSGLNLIVIYP
Trigger: TGGATATATGACAATAAGGTTTAACCCTGATGACAAATCTGCACAACACCACAATGCACACCACTGCTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CAA 90 bp ATAATAGGGCTACAATTTACTGTAATCTCTAAGCAGTGGTGTGCATaGTGGTGTTGTGCAGATTTGTCATCAGGGTTAAACCTTATTGTC +
Preference number: 6 (lower is better)
Translates to: IIGLQFTVISKQWCA*WCCADLSSGLNLIV
Trigger: GACAATAAGGTTTAACCCTGATGACAAATCTGCACAACACCACAATGCACACCACTGCTTAGAGATTACAGTAAATTGTAGCCCTATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS TCA 72 bp TGCAACTTTCAAAGTAACCCATGCCATGATCAAATGTaGACACACCAACATCACGTCCATGATGAATATGAT +
Preference number: 6 (lower is better)
Translates to: CNFQSNPCHDQM*THQHHVHDEYD
Trigger: ATCATATTCATCATGGACGTGATGTTGGTGTGTTCACATTTGATCATGGCATGGGTTACTTTGAAAGTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS TCA 72 bp AACCTATCATGTCTAATAAACTCTACATCATGTCCCTaGTGGCACTTCTTAATGCAGTTCACACATATGGCA +
Preference number: 6 (lower is better)
Translates to: NLSCLINSTSCP*WHFLMQFTHMA
Trigger: TGCCATATGTGTGAACTGCATTAAGAAGTGCCATCAGGGACATGATGTAGAGTTTATTAGACATGATAGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000405808.5
ENST00000434234.5
ENST00000465204.5
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000684085.1
ENST00000684523.1
ENST00000684712.1
CDS TCA 72 bp TACCTATCATGTCTAATAAACTCTACATCATGTCCCTaGTGGCACTTCTTAATGCAGTTCACACATATGGCA +
Preference number: 6 (lower is better)
Translates to: YLSCLINSTSCP*WHFLMQFTHMA
Trigger: TGCCATATGTGTGAACTGCATTAAGAAGTGCCATCAGGGACATGATGTAGAGTTTATTAGACATGATAGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683894.1
CDS CCA 72 bp TGCCACTTTCCCAGGTGCTGCACCAATCATGGTGATTaGAGATTCAATATATATCCATTCATCAGTATATAT +
Preference number: 6 (lower is better)
Translates to: CHFPRCCTNHGD*RFNIYPFISIY
Trigger: ATATATACTGATGAATGGATATATATTGAATCTCCAATCACCATGATTGGTGCAGCACCTGGGAAAGTGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CAA 72 bp AGAATGAACAAAGATAAGTCCATCAAAATGAGCCTCTaGTACCCCACCAAGGGCATCTTCAATAGTATCATA +
Preference number: 6 (lower is better)
Translates to: RMNKDKSIKMSL*YPTKGIFNSII
Trigger: TATGATACTATTGAAGATGCCCTTGGTGGGGTACAAGAGGCTCATTTTGATGGACTTATCTTTGTTCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CAA 72 bp GATTGGATGACTATTAGTGCTGATGAGAACACCTGCTaGAGCATTCCTGAAAATATCATTTTCTTCAAGGAG +
Preference number: 6 (lower is better)
Translates to: DWMTISADENTC*SIPENIIFFKE
Trigger: CTCCTTGAAGAAAATGATATTTTCAGGAATGCTCAAGCAGGTGTTCTCATCAGCACTAATAGTCATCCAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000465204.5
ENST00000470899.1
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CAA 72 bp GAACACACACAACGTTTACAGATGAAGTTTGTTATCTaGGGCGCAGTTAATGGTGTCCCAAAACAATTACAA +
Preference number: 6 (lower is better)
Translates to: EHTQRLQMKFVI*GAVNGVPKQLQ
Trigger: TTGTAATTGTTTTGGGACACCATTAACTGCGCCCAAGATAACAAACTTCATCTGTAAACGTTGTGTGTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682484.1
CDS GCA 72 bp CACTGTAGGGTTAGCATAGGCTTTTACTTCAAAGCCTaGTATCCTATTTCTGTGTATATTGCAACTTTCAAA +
Preference number: 6 (lower is better)
Translates to: HCRVSIGFYFKA*YPISVYIATFK
Trigger: TTTGAAAGTTGCAATATACACAGAAATAGGATAGCAGGCTTTGAAGTAAAAGCCTATGCTAACCCTACAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CAA 72 bp AAGGCCTCGTCCATCACCAAAGATGTAAACTCCTCCTaGATTTCCATTAAATATAGAATTTCCCCTTATTGT +
Preference number: 6 (lower is better)
Translates to: KASSITKDVNSS*ISIKYRISPYC
Trigger: ACAATAAGGGGAAATTCTATATTTAATGGAAATCAAGGAGGAGTTTACATCTTTGGTGATGGACGAGGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CAA 90 bp AGTGTAGGATTACTATCTGTCTTAATCCAGACTCCAGCCATTGCATaGTCAAATATTTCATTGTCTTCTATACAGCCTAGACCAGAATTA +
Preference number: 6 (lower is better)
Translates to: SVGLLSVLIQTPAIA*SNISLSSIQPRPEL
Trigger: TAATTCTGGTCTAGGCTGTATAGAAGACAATGAAATATTTGACAATGCAATGGCTGGAGTCTGGATTAAGACAGATAGTAATCCTACACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000470899.1
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS CAA 90 bp TTGCGTGAACCATTTCTCAACACCTTGCAAATAAACCATTCTGTATaGTGTGTCTTCACTATATTTTGTGAAAACTATCTGAGATACGTC +
Preference number: 6 (lower is better)
Translates to: LREPFLNTLQINHSV*CVFTIFCENYLRYV
Trigger: GACGTATCTCAGATAGTTTTCACAAAATATAGTGAAGACACACAATACAGAATGGTTTATTTGCAAGGTGTTGAGAAATGGTTCACGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS GCA 72 bp TTACTTTCAGTTTCCTCTAGACTTTTGTTTACGATGTaGTCCACTCCATCACACTATACATTTTATGGATGT +
Preference number: 6 (lower is better)
Translates to: LLSVSSRLLFTM*STPSHYTFYGC
Trigger: ACATCCATAAAATGTATAGTGTGATGGAGTGGAGCACATCGTAAACAAAAGTCTAGAGGAAACTGAAAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681999.1
ENST00000684085.1
CDS CAA 72 bp TTACTATCTGTCTTAATCCAGACTCCAGCCATTGCATaGTCAAATATTTCATTGTCTTCTATACAGCCTAGA +
Preference number: 6 (lower is better)
Translates to: LLSVLIQTPAIA*SNISLSSIQPR
Trigger: TCTAGGCTGTATAGAAGACAATGAAATATTTGACAATGCAATGGCTGGAGTCTGGATTAAGACAGATAGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000470899.1
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS TCA 72 bp AAATATAGAATTTCCCCTTATTGTTGGGTCACTATTTaGGGTAATCCATACACCTGCAAAGTTGTTTGCATA +
Preference number: 6 (lower is better)
Translates to: KYRISPYCWVTI*GNPYTCKVVCI
Trigger: TATGCAAACAACTTTGCAGGTGTATGGATTACCTCAAATAGTGACCCAACAATAAGGGGAAATTCTATATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000402508.5
ENST00000403359.8
ENST00000492225.5
ENST00000493962.6
ENST00000681999.1
ENST00000682451.1
ENST00000682975.1
ENST00000683894.1
ENST00000684085.1
ENST00000684712.1
CDS TCA 72 bp GTAAGAATTAACTATACAATGGAGTCCAAGATGCCCTaGGAAGAAAGTGGTTTAATTTTGCTTAATCCTGTA +
Preference number: 6 (lower is better)
Translates to: VRINYTMESKMP*EESGLILLNPV
Trigger: TACAGGATTAAGCAAAATTAAACCACTTTCTTCTCAGGGCATCTTGGACTCCATTGTATAGTTAATTCTTAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470899.1
CDS CAA 72 bp CTTAGTATAATGAATCACATTCTGGTCATAACCAATTaGGATATTCCAGAAGACAACCTTGGATTCAGTGTT +
Preference number: 6 (lower is better)
Translates to: LSIMNHILVITN*DIPEDNLGFSV
Trigger: AACACTGAATCCAAGGTTGTCTTCTGGAATATCCAAATTGGTTATGACCAGAATGTGATTCATTATACTAAG
35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465204.5
ENST00000681999.1
ENST00000684085.1