RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO10 (Homo sapiens)

Ensembl gene IDs: ENSG00000147912

Ensembl transcript IDs: ENST00000276960.7, ENST00000432825.7, ENST00000541607.1, ENST00000543968.5, ENST00000544208.1

Found 639 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGTGGAGCAGGGGGTGGCCACGGGCAGGGAGACTGGCAGGAGGCTaGTGCAGGGGGACAGGTGACATTGGCGGTGCAGGAGTGATACCA +
Preference number: 1 (lower is better)
Translates to: EWSRGWPRAGRLAGG*CRGTGDIGGAGVIP
Trigger: TGGTATCACTCCTGCACCGCCAATGTCACCTGTCCCCCTGCAGCAGCCTCCTGCCAGTCTCCCTGCCCGTGGCCACCCCCTGCTCCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR TCA 90 bp CACCTAGGGCCAATAGAACCAGCCACGCAGCCAAGTGCACGACAGTaGCCCCAGCAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGG +
Preference number: 1 (lower is better)
Translates to: HLGPIEPATQPSARQ*PQQAGEGPTGKAEW
Trigger: CCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTGCTGGGGTCACTGTCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR GCA 90 bp CCCCGGAGCTCCACTTTGCACTGGGCCTCAACCTTGACCCCACTTTaGCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGGGTTGG +
Preference number: 1 (lower is better)
Translates to: PRSSTLHWASTLTPL*RLQEMLLLATRVGW
Trigger: CCAACCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR TCA 90 bp CCTTCTCCAGCTCTGTCTCCCAGAGGATGGCGTCCCCATCCTCGCTaGAGTTCTCTTGAGCCCTGTGGCCTCGAGGTAACTCGCTGGAGC +
Preference number: 1 (lower is better)
Translates to: PSPALSPRGWRPHPR*SSLEPCGLEVTRWS
Trigger: GCTCCAGCGAGTTACCTCGAGGCCACAGGGCTCAAGAGAACTTCAGCGAGGATGGGGACGCCATCCTCTGGGAGACAGAGCTGGAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CCA 90 bp CTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGGGTTaGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTGG +
Preference number: 1 (lower is better)
Translates to: LCRLQEMLLLATRVG*LLWATVMPLSPFAW
Trigger: CCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CCA 90 bp CTTAGAAAGATTAACCTGGCAGGATGCATGGGACAACCTCCAGAGTaGAGCAGGGGGTGGCCACGGGCAGGGAGACTGGCAGGAGGCTGC +
Preference number: 1 (lower is better)
Translates to: LRKINLAGCMGQPPE*SRGWPRAGRLAGGC
Trigger: GCAGCCTCCTGCCAGTCTCCCTGCCCGTGGCCACCCCCTGCTCCACTCTGGAGGTTGTCCCATGCATCCTGCCAGGTTAATCTTTCTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CCA 90 bp CACGCTGCAGCCCCACCTGTTTCAGCATGTCCCTCTTGTCATCCCTaGGGCAGCCTTTCCATGGGGTCTCCTGTTGCTCCCAGGTCCTTC +
Preference number: 1 (lower is better)
Translates to: HAAAPPVSACPSCHP*GSLSMGSPVAPRSF
Trigger: GAAGGACCTGGGAGCAACAGGAGACCCCATGGAAAGGCTGCCCCAGGGATGACAAGAGGGACATGCTGAAACAGGTGGGGCTGCAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR TCA 90 bp TCTGTCTCCCAGAGGATGGCGTCCCCATCCTCGCTGAAGTTCTCTTaGGCCCTGTGGCCTCGAGGTAACTCGCTGGAGCCATCCTTCTGG +
Preference number: 1 (lower is better)
Translates to: SVSQRMASPSSLKFS*ALWPRGNSLEPSFW
Trigger: CCAGAAGGATGGCTCCAGCGAGTTACCTCGAGGCCACAGGGCTCAAGAGAACTTCAGCGAGGATGGGGACGCCATCCTCTGGGAGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR GCA 90 bp GATGGAGTAGAGCCTTGTGCATCCCTGCCCACCCAGCCTAGCATCTaGCTGCACGCTGCAGCCCCACCTGTTTCAGCATGTCCCTCTTGT +
Preference number: 1 (lower is better)
Translates to: DGVEPCASLPTQPSI*LHAAAPPVSACPSC
Trigger: ACAAGAGGGACATGCTGAAACAGGTGGGGCTGCAGCGTGCAGGCAGATGCTAGGCTGGGTGGGCAGGGATGCACAAGGCTCTACTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CCA 90 bp TCCTCAAGTCAACCAAACTCAACTCCTCCAGCCTCCAGAGACAGCTaGGAGGGTGTGGTGGGGTCCCTGGAGGGATTGAGAGGGAGACAG +
Preference number: 1 (lower is better)
Translates to: SSSQPNSTPPASRDS*EGVVGSLEGLRGRQ
Trigger: CTGTCTCCCTCTCAATCCCTCCAGGGACCCCACCACACCCTCCCAGCTGTCTCTGGAGGCTGGAGGAGTTGAGTTTGGTTGACTTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CCA 90 bp CTGTTTCAGCATGTCCCTCTTGTCATCCCTGGGGCAGCCTTTCCATaGGGTCTCCTGTTGCTCCCAGGTCCTTCCTTCCTCCCAGGTCCA +
Preference number: 1 (lower is better)
Translates to: LFQHVPLVIPGAAFP*GLLLLPGPSFLPGP
Trigger: TGGACCTGGGAGGAAGGAAGGACCTGGGAGCAACAGGAGACCCCATGGAAAGGCTGCCCCAGGGATGACAAGAGGGACATGCTGAAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CCA 90 bp GGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTaGGAGCTCTCTGGGGATGGAGTAGAGCCTTGTGCATCCCTGCCC +
Preference number: 1 (lower is better)
Translates to: GWCGHAHMGFESFCI*ELSGDGVEPCASLP
Trigger: GGGCAGGGATGCACAAGGCTCTACTCCATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CCA 90 bp CCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTaGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGG +
Preference number: 1 (lower is better)
Translates to: PRYPHLNRLMLRRGG*CGHAHMGFESFCIW
Trigger: CCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR TCA 90 bp AGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCAACCTTaGCCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTC +
Preference number: 1 (lower is better)
Translates to: RYHCPGAPLCTGPQP*PHFAGCRRCCCWPL
Trigger: GAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CCA 90 bp GGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTaGATCACATTGGTGATGACATGCAGTGCCTCGCTGCTCTGGACA +
Preference number: 1 (lower is better)
Translates to: GWLLWATVMPLSPFA*ITLVMTCSASLLWT
Trigger: TGTCCAGAGCAGCGAGGCACTGCATGTCATCACCAATGTGATCCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CCA 90 bp TTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGGGTTGGCTGCTCTaGGCCACAGTAATGCCTCTGTCCCCATTCGCGTGGATCACATTG +
Preference number: 1 (lower is better)
Translates to: LQEMLLLATRVGWLL*ATVMPLSPFAWITL
Trigger: CAATGTGATCCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAACAGCATCTCCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CCA 90 bp GTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCAGGCAGTaGGGTCTGACCTCACCTGGCTTTGGGACTTGGACATATTCACAG +
Preference number: 1 (lower is better)
Translates to: VQVELALHPALFLRQ*GLTSPGFGTWTYSQ
Trigger: CTGTGAATATGTCCAAGTCCCAAAGCCAGGTGAGGTCAGACCCCACTGCCTGAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR TCA 90 bp GAGTGGGGAGGCTTGGGAGGGTCAGTAAAGACCAGCGCTCATCCATaGGAACACAGATGCGAACGAGAGGCCCAGGTACCCTCATCTGAA +
Preference number: 1 (lower is better)
Translates to: EWGGLGGSVKTSAHP*EHRCEREAQVPSSE
Trigger: TTCAGATGAGGGTACCTGGGCCTCTCGTTCGCATCTGTGTTCTCATGGATGAGCGCTGGTCTTTACTGACCCTCCCAAGCCTCCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR TCA 90 bp TTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCAGGCAGTGGGGTCTaGCCTCACCTGGCTTTGGGACTTGGACATATTCACAGTACGGTT +
Preference number: 1 (lower is better)
Translates to: LSWPCIQPSSSGSGV*PHLALGLGHIHSTV
Trigger: AACCGTACTGTGAATATGTCCAAGTCCCAAAGCCAGGTGAGGTCAGACCCCACTGCCTGAGGAAGAGGGCTGGATGCAGGGCCAGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CCA 90 bp AATACTGTTAGACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTaGGTCGTCCTCCTTCTCCAGCTCTGTCTCCCAGAGGATGGCGTC +
Preference number: 1 (lower is better)
Translates to: NTVRLNKSYGDGPAQ*VVLLLQLCLPEDGV
Trigger: GACGCCATCCTCTGGGAGACAGAGCTGGAGAAGGAGGACGACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTCTAACAGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR GCA 90 bp GGACCAATCAGAACACAGCCCAAGCAGAAGCAACTGGAACAGCTGTaGATTGCAGTAACACAGGCGGTACAGGTTAGGGTGAGCGGTGCT +
Preference number: 1 (lower is better)
Translates to: GPIRTQPKQKQLEQL*IAVTQAVQVRVSGA
Trigger: AGCACCGCTCACCCTAACCTGTACCGCCTGTGTTACTGCAATGCACAGCTGTTCCAGTTGCTTCTGCTTGGGCTGTGTTCTGATTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CCA 90 bp ATTGCCCACTTTCTTCTTGCTATGGGCTGTGGAGCTGAAGTGTTCTaGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGG +
Preference number: 1 (lower is better)
Translates to: IAHFLLAMGCGAEVF*RYRVLEARDPFVRG
Trigger: CCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACTTCAGCTCCACAGCCCATAGCAAGAAGAAAGTGGGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CCA 90 bp TCCAGCCCTCTTCCTCAGGCAGTGGGGTCTGACCTCACCTGGCTTTaGGACTTGGACATATTCACAGTACGGTTCAGTAAAGTCCTCTGG +
Preference number: 1 (lower is better)
Translates to: SSPLPQAVGSDLTWL*DLDIFTVRFSKVLW
Trigger: CCAGAGGACTTTACTGAACCGTACTGTGAATATGTCCAAGTCCCAAAGCCAGGTGAGGTCAGACCCCACTGCCTGAGGAAGAGGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR GCA 90 bp TGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCAGCTaGAGCCCGCTGCCCCGGTTGCCAATGATATCGTTTTCAATGACG +
Preference number: 1 (lower is better)
Translates to: WIRFFITLVSDLGSS*SPLPRLPMISFSMT
Trigger: CGTCATTGAAAACGATATCATTGGCAACCGGGGCAGCGGGCTGCAGCTGCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR TCA 90 bp TCCTTCTATGAGGCCTTTGCCTTCGTCTCCCACAACCACACCATCTaGATAGCCAAAGCAGATGAGGTTACTCCTGAGAACGGGGATCCC +
Preference number: 1 (lower is better)
Translates to: SFYEAFAFVSHNHTI*IAKADEVTPENGDP
Trigger: GGGATCCCCGTTCTCAGGAGTAACCTCATCTGCTTTGGCTATTCAGATGGTGTGGTTGTGGGAGACGAAGGCAAAGGCCTCATAGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR TCA 90 bp CCTGAAAAACATTGCCCACTTTCTTCTTGCTATGGGCTGTGGAGCTaGAGTGTTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATT +
Preference number: 1 (lower is better)
Translates to: PEKHCPLSSCYGLWS*SVLEVPCFGGPGPI
Trigger: AATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACTTCAGCTCCACAGCCCATAGCAAGAAGAAAGTGGGCAATGTTTTTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR TCA 90 bp AAGTTGCCCAAGGTCACACAGCCAGTAACCTGCAGAGCTGAGATCTaGAACCACATACCCCTGACTCTTAAAAAGCTTGTTCCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: KLPKVTQPVTCRAEI*NHIPLTLKKLVPSW
Trigger: CCAGGAGGGAACAAGCTTTTTAAGAGTCAGGGGTATGTGGTTTCAGATCTCAGCTCTGCAGGTTACTGGCTGTGTGACCTTGGGCAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR TCA 90 bp AGACTTCGAGTGACTGGAAACCCACCAGCTTCTATCCCTTCTCCCTaGAAAACATTGCCCACTTTCTTCTTGCTATGGGCTGTGGAGCTG +
Preference number: 1 (lower is better)
Translates to: RLRVTGNPPASIPSP*KTLPTFFLLWAVEL
Trigger: CAGCTCCACAGCCCATAGCAAGAAGAAAGTGGGCAATGTTTTTCAGGGAGAAGGGATAGAAGCTGGTGGGTTTCCAGTCACTCGAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR TCA 90 bp GCATTTGAGCTTCCCCCGCTCTTCACAATCTTTATAGACTTCGAGTaGCTGGAAACCCACCAGCTTCTATCCCTTCTCCCTGAAAAACAT +
Preference number: 1 (lower is better)
Translates to: AFELPPLFTIFIDFE*LETHQLLSLLPEKH
Trigger: ATGTTTTTCAGGGAGAAGGGATAGAAGCTGGTGGGTTTCCAGTCACTCGAAGTCTATAAAGATTGTGAAGAGCGGGGGAAGCTCAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR TCA 90 bp GAAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGGTTGTTTaGGATCTGCTGAAAGATGGTCTTACTGGTTTTGCCCTGGAAGAT +
Preference number: 1 (lower is better)
Translates to: EDQELVVLHDAFSVV*DLLKDGLTGFALED
Trigger: ATCTTCCAGGGCAAAACCAGTAAGACCATCTTTCAGCAGATCTCAAACAACCGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR TCA 90 bp TCACTAGAATCACTTCCCGCCATCAGAAGTAAATCTGCTCTTTCCTaGGAAGAGTCTGGGTTTGGTGTGTGTAAAACACAGTTCCTTAGA +
Preference number: 1 (lower is better)
Translates to: SLESLPAIRSKSALS*EESGFGVCKTQFLR
Trigger: TCTAAGGAACTGTGTTTTACACACACCAAACCCAGACTCTTCTCAGGAAAGAGCAGATTTACTTCTGATGGCGGGAAGTGATTCTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CAA 90 bp AGCAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATaGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: SRLVKAPQERPSGRG*FRLSWPCIQPSSSG
Trigger: GCCTGAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR GCA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCACCCAGCCTAGCATCTaGCTGCACGCTGCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGTQPSI*LHAAAP
Trigger: TGGGGCTGCAGCGTGCAGGCAGATGCTAGGCTGGGT...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCGAGGGGCGGCTGGTGTaGGCACGCTCACATGGGGTT +
Preference number: 2 (lower is better)
Translates to: EWEGIVQVELALHPALFLEGRLV*ARSHGV
Trigger: AACCCCATGTGAGCGTGCCCACACCAGCCGCCCCTC...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CAA 90 bp GCCCCGGAGCTCCACTTTGCACTGGGCCTCAACCTTGACCCCACTTaGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGGGTTG +
Preference number: 2 (lower is better)
Translates to: APELHFALGLNLDPT*PVAGDAVVGHSGGL
Trigger: CAACCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR GCA 90 bp GCATGGGACAACCTCCAGAGTGGAGCAGGGGGTGGCCACGGGCAGGGAGACTGGGGTGATGACATGCAGTaGCTCGCTGCTCTGGACATA +
Preference number: 2 (lower is better)
Translates to: AWDNLQSGAGGGHGQGDWGDDMQ*LAALDI
Trigger: TATGTCCAGAGCAGCGAGGCACTGCATGTCATCACC...CCAGTCTCCCTGCCCGTGGCCACCCCCTGCTCCACTCTGGAGGTTGTCCCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CCA 90 bp GGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGGCCTCCAGAGACAGCTaGGAGGGTGTGGTGGGGTCC +
Preference number: 2 (lower is better)
Translates to: GGWCGHAHMGFESFCIWEASRDS*EGVVGS
Trigger: GGACCCCACCACACCCTCCCAGCTGTCTCTGGAGGC...CTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CCA 90 bp CCAACAGAGCAGCACCTAGGGCCAATAGAACCAGCCACGCAGCCAAGTGCACGACTCAGGAGGGGCGGCTaGTGTGGGCACGCTCACATG +
Preference number: 2 (lower is better)
Translates to: PTEQHLGPIEPATQPSARLRRGG*CGHAHM
Trigger: CATGTGAGCGTGCCCACACCAGCCGCCCCTCCTGAG...TCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTGCTGCTCTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR GCA 90 bp AGGGGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGAGCCTAGCATCTGCCTaGACGCTGCAGCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: RGGWCGHAHMGFESFCIWSLASA*TLQPHL
Trigger: CAGGTGGGGCTGCAGCGTGCAGGCAGATGCTAGGCT...CCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CCA 90 bp GCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGGAGCACACAGGTGAGTaGGGGGTCAGGCAATGGACC +
Preference number: 2 (lower is better)
Translates to: AGEGPTGKAEWEGIVQVEEHTGE*GVRQWT
Trigger: GGTCCATTGCCTGACCCCCCACTCACCTGTGTGCTC...CTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CAA 90 bp ACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGGGTaGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTG +
Preference number: 2 (lower is better)
Translates to: TLPVAGDAVVGHSGG*AALGHSNASVPIRV
Trigger: CACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CAA 90 bp GCCTCAACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTaGGCCACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCT +
Preference number: 2 (lower is better)
Translates to: ASTLTPLCRLQEMLL*ATRVGWLLWATVMP
Trigger: AGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGTTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CAA 90 bp TGGGCCTCAACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTaGTTGGCCACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATG +
Preference number: 2 (lower is better)
Translates to: WASTLTPLCRLQEML*LATRVGWLLWATVM
Trigger: CATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGTTGAGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR TCA 90 bp AGGCACAGGCCTTTTTCTGACTGGAGTCGACAGCTGGCAGGGTTGCAGGGAGCCTCGCTGAAGTTCTCTTaGGCCCTGTGGCCTCGAGGT +
Preference number: 2 (lower is better)
Translates to: RHRPFSDWSRQLAGLQGASLKFS*ALWPRG
Trigger: ACCTCGAGGCCACAGGGCTCAAGAGAACTTCAGCGA...GGCTCCCTGCAACCCTGCCAGCTGTCGACTCCAGTCAGAAAAAGGCCTGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CCA 90 bp GCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGGGAGGTACCGTGTTTTaGAGGCCCGGGACCCATTTG +
Preference number: 2 (lower is better)
Translates to: AGEGPTGKAEWEGIVQVEGGTVF*RPGTHL
Trigger: CAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCC...CTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR TCA 90 bp CCAACAGAGCAGCACCTAGGGCCAATAGAACCAGCCACGCAGCCAAGTGCACGAGAGGAGGAAAGAGCATaGGCCAAGGCACAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: PTEQHLGPIEPATQPSAREEERA*AKAQSG
Trigger: CCCACTCTGTGCCTTGGCTCATGCTCTTTCCTCCTC...TCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTGCTGCTCTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR GCA 90 bp CTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGGGCATGCAGTGCCTCGCTaGTCTGGACATAGAGTCCTG +
Preference number: 2 (lower is better)
Translates to: LDPTLPVAGDAVVGHSGGHAVPR*SGHRVL
Trigger: CAGGACTCTATGTCCAGAGCAGCGAGGCACTGCATG...CCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CCA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGTGGTTGCTGGTGACATaGGGGAGGCTGGACGACATC +
Preference number: 2 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVWLLVT*GRLDDI
Trigger: GATGTCGTCCAGCCTCCCCCATGTCACCAGCAACCA...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACGGAGCTGAAGTGTTCTaGAGGTACCGTGTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHGAEVF*RYRVLE
Trigger: CTCCAAAACACGGTACCTCCAGAACACTTCAGCTCC...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCGGAGCTCTCTGGGGATaGAGTAGAGCCTTGTGCATC +
Preference number: 2 (lower is better)
Translates to: EWEGIVQVELALHPALFLGALWG*SRALCI
Trigger: GATGCACAAGGCTCTACTCCATCCCCAGAGAGCTCC...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR TCA 90 bp AGGGGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGTATGGGCTGTGGAGCTaGAGTGTTCTGGAGGTACCG +
Preference number: 2 (lower is better)
Translates to: RGGWCGHAHMGFESFCIWYGLWS*SVLEVP
Trigger: CGGTACCTCCAGAACACTTCAGCTCCACAGCCCATA...CCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR TCA 90 bp CAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTACCAGCGCTCATCCATaGGAACACAGATGCGAACGA +
Preference number: 2 (lower is better)
Translates to: QAGEGPTGKAEWEGIVQVTSAHP*EHRCER
Trigger: TCGTTCGCATCTGTGTTCTCATGGATGAGCGCTGGT...AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CCA 90 bp GGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTACTGGGGCAGCCTTTCCATaGGGTCTCCTGTTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: GATKQVQRTVPGIEEASTGAAFP*GLLLLP
Trigger: TGGGAGCAACAGGAGACCCCATGGAAAGGCTGCCCC...AGTACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CCA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCGAATCCTTCTGCATTTaGGAGCTCTCTGGGGATGGA +
Preference number: 2 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGESFCI*ELSGDG
Trigger: TCCATCCCCAGAGAGCTCCCAAATGCAGAAGGATTC...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CCA 90 bp CAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGTGGGCACGCTCACATaGGGTTTGAATCCTTCTGCA +
Preference number: 2 (lower is better)
Translates to: QAGEGPTGKAEWEGIVQVVGTLT*GLNPSA
Trigger: TGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCAC...AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CCA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGAGCCAAGGCACAGAGTaGGGAGGCTTGGGAGGGTCA +
Preference number: 2 (lower is better)
Translates to: DKAESAQYPEREQRKATESQGTE*GGLGGS
Trigger: TGACCCTCCCAAGCCTCCCCACTCTGTGCCTTGGCT...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CCA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGGCAGGGAGAGCTATGTaGAGGTGGCAGTGTCTCGGC +
Preference number: 2 (lower is better)
Translates to: DKAESAQYPEREQRKATEAGRAM*RWQCLG
Trigger: GCCGAGACACTGCCACCTCCACATAGCTCTCCCTGC...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR TCA 90 bp ATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTCCAAGTGCACGACAGTaGCCCCAGCAGGCTGGTGAA +
Preference number: 2 (lower is better)
Translates to: IGATKQVQRTVPGIEEASPSARQ*PQQAGE
Trigger: TTCACCAGCCTGCTGGGGTCACTGTCGTGCACTTGG...ACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR GCA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGAGCCTTGTGCATCCCTaGCCACCCAGCCTAGCATCT +
Preference number: 2 (lower is better)
Translates to: DKAESAQYPEREQRKATESLVHP*PPSLAS
Trigger: AGATGCTAGGCTGGGTGGGCAGGGATGCACAAGGCT...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR GCA 90 bp CAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGGGTTTGAATCCTTCTaGATTTGGGAGCTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: QAGEGPTGKAEWEGIVQVGFESF*IWELSG
Trigger: CCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCC...AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CCA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGACCCTCTTGTCATCCCTaGGGCAGCCTTTCCATGGGG +
Preference number: 2 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGPSCHP*GSLSMG
Trigger: CCCCATGGAAAGGCTGCCCCAGGGATGACAAGAGGG...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR GCA 90 bp GCTTACTGTGGCTCTAGAGGACTCGTTCAGGCAACCCCAAGCACTCACTTTTTCGCCGGTTGCAGGAGATaGTGTTGTTGGCCACTCGGG +
Preference number: 2 (lower is better)
Translates to: AYCGSRGLVQATPSTHFFAGCRR*CCWPLG
Trigger: CCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGC...GAAAAAGTGAGTGCTTGGGGTTGCCTGAACGAGTCCTCTAGAGCCACAGTAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR GCA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGAAGGTTGAGCTGGCCCTaGATCCAGCCCTCTTCCTCA +
Preference number: 2 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGRLSWP*IQPSSS
Trigger: TGAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCT...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CCA 90 bp TCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCAACAGGAGATGCTGTTGTTaGCCACTCGGGTGGGTTGGC +
Preference number: 2 (lower is better)
Translates to: SVVIDTIAPELHFALGLNRRCCC*PLGWVG
Trigger: GCCAACCCACCCGAGTGGCCAACAACAGCATCTCCT...GTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CAA 90 bp CCTCTTCCTCAGGCAGTGGGGTCTGACCTCACCTGGCTTTGGGACTaGGACATATTCACAGTACGGTTCAGTAAAGTCCTCTGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: PLPQAVGSDLTWLWD*DIFTVRFSKVLWEL
Trigger: CAGCTCCCAGAGGACTTTACTGAACCGTACTGTGAATATGTCCAAGTCCCAAAGCCAGGTGAGGTCAGACCCCACTGCCTGAGGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR TCA 90 bp TTGTTGGCCACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCTGGACATAGAGTCCTaGGGCTCCATTGTGATTAAT +
Preference number: 2 (lower is better)
Translates to: LLATRVGWLLWATVMPLSLDIES*GSIVIN
Trigger: ATTAATCACAATGGAGCCTCAGGACTCTATGTCCAG...GGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR TCA 90 bp GCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAGAACCCAGTGCTCCTGGCTCCCTTTATAGACTTCGAGTaGCTGGAAACCCACCAGCTT +
Preference number: 2 (lower is better)
Translates to: ASTLVPSVLRENPVLLAPFIDFE*LETHQL
Trigger: AAGCTGGTGGGTTTCCAGTCACTCGAAGTCTATAAA...GGGAGCCAGGAGCACTGGGTTCTCCCTGAGAACACTGGGCACAAGAGTACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR GCA 90 bp AAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGGTTGTTTGAGATCTGCGACCTGGGCAGCAGCTaGAGCCCGCTGCCCCGGTTG +
Preference number: 2 (lower is better)
Translates to: KTRNLLFCMMHSRLFEICDLGSS*SPLPRL
Trigger: CAACCGGGGCAGCGGGCTGCAGCTGCTGCCCAGGTC...GCAGATCTCAAACAACCGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CCA 90 bp GACAGTGCCAGGGATAGAAGAGGCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAGGGTCTGACCTCACCTaGCTTTGGGACTTGGACATA +
Preference number: 2 (lower is better)
Translates to: DSARDRRGQYSCAQCSQGGSDLT*LWDLDI
Trigger: TATGTCCAAGTCCCAAAGCCAGGTGAGGTCAGACCC...TCCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTTCTATCCCTGGCACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR TCA 90 bp ATTAATACTGTTAGACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCCGTCCCCATCCTCGCTaGAGTTCTCTTGAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: INTVRLNKSYGDGPAQWVRPHPR*SSLEPC
Trigger: ACAGGGCTCAAGAGAACTTCAGCGAGGATGGGGACG...GACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTCTAACAGTATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CCA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCCTGTCCCCATTCGCGTaGATCACATTGGTGATGACA +
Preference number: 2 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSLSPFA*ITLVMT
Trigger: TGTCATCACCAATGTGATCCACGCGAATGGGGACAG...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CCA 90 bp GGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTACTCCTGGCTTTGGGACTTaGACATATTCACAGTACGGT +
Preference number: 2 (lower is better)
Translates to: GATKQVQRTVPGIEEASTPGFGT*TYSQYG
Trigger: ACCGTACTGTGAATATGTCCAAGTCCCAAAGCCAGG...AGTACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR GCA 90 bp CAACCAGAATGTGAAAGCGAAAGCACGGACCAATCAGAACACAGCCCAAGCAGAACATTGGTGATGACATaGAGTGCCTCGCTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: QPECESESTDQSEHSPSRTLVMT*SASLLW
Trigger: CCAGAGCAGCGAGGCACTGCATGTCATCACCAATGT...TCTGCTTGGGCTGTGTTCTGATTGGTCCGTGCTTTCGCTTTCACATTCTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CCA 90 bp GGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTACTACTTTCTTCTTGCTATaGGCTGTGGAGCTGAAGTGT +
Preference number: 2 (lower is better)
Translates to: GATKQVQRTVPGIEEASTTFFLL*AVELKC
Trigger: ACACTTCAGCTCCACAGCCCATAGCAAGAAGAAAGT...AGTACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CCA 90 bp CACTCACTTTTTCTTGAAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGGCCACTCGGGTGGGTTaGCTGCTCTGGGCCACAGTA +
Preference number: 2 (lower is better)
Translates to: HSLFLEDQELVVLHDAFSATRVG*LLWATV
Trigger: TACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGC...CGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTTCAAGAAAAAGTGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CCA 90 bp CACTCACTTTTTCTTGAAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGTGTTGGCCACTCGGGTaGGTTGGCTGCTCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: HSLFLEDQELVVLHDAFSCWPLG*VGCSGP
Trigger: TGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACA...CGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTTCAAGAAAAAGTGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CAA 90 bp GATGGTGATGTCGCTGAAATGGAGAACGTGAAAGGACAGACAGGTTaGAGGAAGATGGGTGGCGGCAATTGTGATACATTGAGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: DGDVAEMENVKGQTG*RKMGGGNCDTLRQS
Trigger: ACTCTGCCTCAATGTATCACAATTGCCGCCACCCATCTTCCTCAAACCTGTCTGTCCTTTCACGTTCTCCATTTCAGCGACATCACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CAA 90 bp ATTGAGAGGGAGACAGCTCTAGCAAAGGGGAAAATTCTGGAGCAGTaGTCTCTCTCCACCTCACTAGAATCACTTCCCGCCATCAGAAGT +
Preference number: 2 (lower is better)
Translates to: IERETALAKGKILEQ*SLSTSLESLPAIRS
Trigger: ACTTCTGATGGCGGGAAGTGATTCTAGTGAGGTGGAGAGAGACAACTGCTCCAGAATTTTCCCCTTTGCTAGAGCTGTCTCCCTCTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR TCA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGACTCAGAGAAAATCCTaGCCAAAAGCTTCAGCATTT +
Preference number: 2 (lower is better)
Translates to: DKAESAQYPEREQRKATETQRKS*PKASAF
Trigger: AAATGCTGAAGCTTTTGGTCAGGATTTTCTCTGAGT...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CCA 90 bp AAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGGTTGTTTGAGATCTGCAGCTCCACTTTGCACTaGGCCTCAACCTTGACCCCA +
Preference number: 2 (lower is better)
Translates to: KTRNLLFCMMHSRLFEICSSTLH*ASTLTP
Trigger: TGGGGTCAAGGTTGAGGCCCAGTGCAAAGTGGAGCT...GCAGATCTCAAACAACCGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR TCA 90 bp GCTTACTGTGGCTCTAGAGGACTCGTTCAGGCAACCCCAAGCACTCACTTTTTCTTGTTTGAGATCTGCTaGAAGATGGTCTTACTGGTT +
Preference number: 2 (lower is better)
Translates to: AYCGSRGLVQATPSTHFFLFEIC*KMVLLV
Trigger: AACCAGTAAGACCATCTTTCAGCAGATCTCAAACAA...GAAAAAGTGAGTGCTTGGGGTTGCCTGAACGAGTCCTCTAGAGCCACAGTAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CCA 90 bp CAACCAGAATGTGAAAGCGAAAGCACGGACCAATCAGAACACAGCCCAAGCAGAGGGAAGAGGAGGTGCTaGAAAAAGGAACATTTTAGA +
Preference number: 2 (lower is better)
Translates to: QPECESESTDQSEHSPSRGKRRC*KKEHFR
Trigger: TCTAAAATGTTCCTTTTTCCAGCACCTCCTCTTCCC...TCTGCTTGGGCTGTGTTCTGATTGGTCCGTGCTTTCGCTTTCACATTCTGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CAA 90 bp CCGCCATCAGAAGTAAATCTGCTCTTTCCTGAGAAGAGTCTGGGTTaGGTGTGTGTAAAACACAGTTCCTTAGAACTCAGAGAAAATCCT +
Preference number: 2 (lower is better)
Translates to: PPSEVNLLFPEKSLG*VCVKHSSLELRENP
Trigger: AGGATTTTCTCTGAGTTCTAAGGAACTGTGTTTTACACACACCAAACCCAGACTCTTCTCAGGAAAGAGCAGATTTACTTCTGATGGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR GCA 72 bp CCTGCACCAGGGCCTTGGCACGGCCCCGCACGGCGATaGCGTAGGCCCGGAACGAGTGGATCCGGTTCTTTA +
Preference number: 3 (lower is better)
Translates to: PAPGPWHGPARR*RRPGTSGSGSL
Trigger: TAAAGAACCGGATCCACTCGTTCCGGGCCTACGGCATCGCCGTGCGGGGCCGTGCCAAGGCCCTGGTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CCA 72 bp CCAGGCACAGGCCTTTTTCTGACTGGAGTCGACAGCTaGCAGGGTTGCAGGGAGCCCGGGCAGCCACAATCC +
Preference number: 3 (lower is better)
Translates to: PGTGLFLTGVDS*QGCREPGQPQS
Trigger: GGATTGTGGCTGCCCGGGCTCCCTGCAACCCTGCCAGCTGTCGACTCCAGTCAGAAAAAGGCCTGTGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CAA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCGGATGGAGTAGAGCCTaGTGCATCCCTGCCCACCCA +
Preference number: 3 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGGWSRA*CIPAHP
Trigger: TGGGTGGGCAGGGATGCACAAGGCTCTACTCCATCC...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR GCA 72 bp GAGCCTTGTGCATCCCTGCCCACCCAGCCTAGCATCTaGCTGCACGCTGCAGCCCCACCTGTTTCAGCATGT +
Preference number: 3 (lower is better)
Translates to: EPCASLPTQPSI*LHAAAPPVSAC
Trigger: ACATGCTGAAACAGGTGGGGCTGCAGCGTGCAGGCAGATGCTAGGCTGGGTGGGCAGGGATGCACAAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CCA 72 bp CAGCAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTaGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCAT +
Preference number: 3 (lower is better)
Translates to: QQAGEGPTGKAE*EGIVQVELALH
Trigger: ATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CAA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCGGCCACTCGGGTGGGTaGGCTGCTCTGGGCCACAGT +
Preference number: 3 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSGHSGG*AALGHS
Trigger: ACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCC...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR TCA 72 bp CAGAGGATGGCGTCCCCATCCTCGCTGAAGTTCTCTTaGGCCCTGTGGCCTCGAGGTAACTCGCTGGAGCCA +
Preference number: 3 (lower is better)
Translates to: QRMASPSSLKFS*ALWPRGNSLEP
Trigger: TGGCTCCAGCGAGTTACCTCGAGGCCACAGGGCTCAAGAGAACTTCAGCGAGGATGGGGACGCCATCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR TCA 72 bp CACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTaGGCTGGCCCTGCATCCAGCCCTCTTCCTCAGGCA +
Preference number: 3 (lower is better)
Translates to: HRKGRVGGDCSG*AGPASSPLPQA
Trigger: TGCCTGAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR TCA 72 bp CCAATAGAACCAGCCACGCAGCCAAGTGCACGACAGTaGCCCCAGCAGGCTGGTGAAGGCCCCACAGGAAAG +
Preference number: 3 (lower is better)
Translates to: PIEPATQPSARQ*PQQAGEGPTGK
Trigger: CTTTCCTGTGGGGCCTTCACCAGCCTGCTGGGGTCACTGTCGTGCACTTGGCTGCGTGGCTGGTTCTATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CCA 72 bp ATGCTGTTGTTGGCCACTCGGGTGGGTTGGCTGCTCTaGGCCACAGTAATGCCTCTGTCCCCATTCGCGTGG +
Preference number: 3 (lower is better)
Translates to: MLLLATRVGWLL*ATVMPLSPFAW
Trigger: CCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAACAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CCA 72 bp GCTGTGGAGCTGAAGTGTTCTGGAGGTACCGTGTTTTaGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: AVELKCSGGTVF*RPGTHLFEGEG
Trigger: CCCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACTTCAGCTCCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CCA 72 bp CAGGCCACTAATCCTACCCCAACCCCAGGCTGGATCTaGGGACACACAGTCAGAAGTGGCCCTACCTACGGG +
Preference number: 3 (lower is better)
Translates to: QATNPTPTPGWI*GHTVRSGPTYG
Trigger: CCCGTAGGTAGGGCCACTTCTGACTGTGTGTCCCCAGATCCAGCCTGGGGTTGGGGTAGGATTAGTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CAA 90 bp CACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCCCTTCTATGAGGCCTTaGCCTTCGTCTCCCACAACC +
Preference number: 3 (lower is better)
Translates to: HSGGLAALGHSNASVPIRPSMRP*PSSPTT
Trigger: GGTTGTGGGAGACGAAGGCAAAGGCCTCATAGAAGG...GCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR TCA 72 bp GCTCTGTCTCCCAGAGGATGGCGTCCCCATCCTCGCTaGAGTTCTCTTGAGCCCTGTGGCCTCGAGGTAACT +
Preference number: 3 (lower is better)
Translates to: ALSPRGWRPHPR*SSLEPCGLEVT
Trigger: AGTTACCTCGAGGCCACAGGGCTCAAGAGAACTTCAGCGAGGATGGGGACGCCATCCTCTGGGAGACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR TCA 72 bp TGCCCCGGAGCTCCACTTTGCACTGGGCCTCAACCTTaGCCCCACTTTGCCGGTTGCAGGAGATGCTGTTGT +
Preference number: 3 (lower is better)
Translates to: CPGAPLCTGPQP*PHFAGCRRCCC
Trigger: ACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CCA 72 bp AGACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTaGGTCGTCCTCCTTCTCCAGCTCTGTCTCCCAGAG +
Preference number: 3 (lower is better)
Translates to: RLNKSYGDGPAQ*VVLLLQLCLPE
Trigger: CTCTGGGAGACAGAGCTGGAGAAGGAGGACGACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CCA 72 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTaGTGTGGGCACGCTCACATGGGGTTTGAATCCTTC +
Preference number: 3 (lower is better)
Translates to: PHLNRLMLRRGG*CGHAHMGFESF
Trigger: GAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CAA 90 bp CCAACAGAGCAGCACCTAGGGCCAATAGAACCAGCCACGCAGCCAAGTGCACGAAGGGGATTGTTCAGGTaGAGCTGGCCCTGCATCCAG +
Preference number: 3 (lower is better)
Translates to: PTEQHLGPIEPATQPSARRGLFR*SWPCIQ
Trigger: CTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCT...TCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTGCTGCTCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CAA 90 bp GGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTACTAGCACCCATCCAGGCTaGGCCCTGAAGCAGGTCTGT +
Preference number: 3 (lower is better)
Translates to: GATKQVQRTVPGIEEASTSTHPG*ALKQVC
Trigger: ACAGACCTGCTTCAGGGCCAAGCCTGGATGGGTGCT...AGTACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR TCA 72 bp GGCTTGGGAGGGTCAGTAAAGACCAGCGCTCATCCATaGGAACACAGATGCGAACGAGAGGCCCAGGTACCC +
Preference number: 3 (lower is better)
Translates to: GLGGSVKTSAHP*EHRCEREAQVP
Trigger: GGGTACCTGGGCCTCTCGTTCGCATCTGTGTTCTCATGGATGAGCGCTGGTCTTTACTGACCCTCCCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR TCA 72 bp GAGCTATGTGGAGGTGGCAGTGTCTCGGCTAAACCTTaGGGAACGAGGACACGGAGATGGGGGAGAAGGGCA +
Preference number: 3 (lower is better)
Translates to: ELCGGGSVSAKP*GTRTRRWGRRA
Trigger: TGCCCTTCTCCCCCATCTCCGTGTCCTCGTTCCTCAAGGTTTAGCCGAGACACTGCCACCTCCACATAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR GCA 72 bp TCCACTTTGCACTGGGCCTCAACCTTGACCCCACTTTaGCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGG +
Preference number: 3 (lower is better)
Translates to: STLHWASTLTPL*RLQEMLLLATR
Trigger: CCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGTTGAGGCCCAGTGCAAAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CAA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCTTGCAGGAGATGCTGTaGTTGGCCACTCGGGTGGGT +
Preference number: 3 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSLQEML*LATRVG
Trigger: ACCCACCCGAGTGGCCAACAACAGCATCTCCTGCAA...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CAA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGTGGAGGTACCGTGTTTaGGAGGCCCGGGACCCATTT +
Preference number: 3 (lower is better)
Translates to: DKAESAQYPEREQRKATEWRYRV*EARDPF
Trigger: AAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCA...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CAA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGTTCAGCATGTCCCTCTaGTCATCCCTGGGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMFSMSL*SSLGQP
Trigger: AGGCTGCCCCAGGGATGACAAGAGGGACATGCTGAA...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CAA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGACAGAGTGGGGAGGCTaGGGAGGGTCAGTAAAGACC +
Preference number: 3 (lower is better)
Translates to: DKAESAQYPEREQRKATETEWGG*GGSVKT
Trigger: GGTCTTTACTGACCCTCCCAAGCCTCCCCACTCTGT...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CCA 72 bp CTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTaGATCACATTGGTGATGACATGCAGTGCCTCGCTG +
Preference number: 3 (lower is better)
Translates to: LWATVMPLSPFA*ITLVMTCSASL
Trigger: CAGCGAGGCACTGCATGTCATCACCAATGTGATCCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CAA 90 bp GCTTACTGTGGCTCTAGAGGACTCGTTCAGGCAACCCCAAGCACTCACTTTTTCCAGGAGATGCTGTTGTaGGCCACTCGGGTGGGTTGG +
Preference number: 3 (lower is better)
Translates to: AYCGSRGLVQATPSTHFFQEMLL*ATRVGW
Trigger: CCAACCCACCCGAGTGGCCAACAACAGCATCTCCTG...GAAAAAGTGAGTGCTTGGGGTTGCCTGAACGAGTCCTCTAGAGCCACAGTAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CAA 90 bp CACTCACTTTTTCTTGAAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGTCCTGCACCAGGGCCTaGGCACGGCCCCGCACGGCG +
Preference number: 3 (lower is better)
Translates to: HSLFLEDQELVVLHDAFSSCTRA*ARPRTA
Trigger: CGCCGTGCGGGGCCGTGCCAAGGCCCTGGTGCAGGA...CGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTTCAAGAAAAAGTGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CAA 90 bp CCAACAGAGCAGCACCTAGGGCCAATAGAACCAGCCACGCAGCCAAGTGCACGAACCTGGCTTTGGGACTaGGACATATTCACAGTACGG +
Preference number: 3 (lower is better)
Translates to: PTEQHLGPIEPATQPSARTWLWD*DIFTVR
Trigger: CCGTACTGTGAATATGTCCAAGTCCCAAAGCCAGGT...TCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTGCTGCTCTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR GCA 72 bp TGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTaGATTTGGGAGCTCTCTGGGGATGGAGTAGAGCCT +
Preference number: 3 (lower is better)
Translates to: WCGHAHMGFESF*IWELSGDGVEP
Trigger: AGGCTCTACTCCATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CCA 72 bp AGCTCTCACTTAGAAAGATTAACCTGGCAGGATGCATaGGACAACCTCCAGAGTGGAGCAGGGGGTGGCCAC +
Preference number: 3 (lower is better)
Translates to: SSHLERLTWQDA*DNLQSGAGGGH
Trigger: GTGGCCACCCCCTGCTCCACTCTGGAGGTTGTCCCATGCATCCTGCCAGGTTAATCTTTCTAAGTGAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CCA 72 bp GGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTaGGAGCTCTCTGGGGATGGAGTAGAGCCTTGTGCA +
Preference number: 3 (lower is better)
Translates to: GHAHMGFESFCI*ELSGDGVEPCA
Trigger: TGCACAAGGCTCTACTCCATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CAA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCTTCGCGTGGATCACATaGGTGATGACATGCAGTGCC +
Preference number: 3 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSFAWIT*VMTCSA
Trigger: GGCACTGCATGTCATCACCAATGTGATCCACGCGAA...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR-3UTR CAA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGTTGCCCACTTTCTTCTaGCTATGGGCTGTGGAGCTG +
Preference number: 3 (lower is better)
Translates to: DKAESAQYPEREQRKATELPTFF*LWAVEL
Trigger: CAGCTCCACAGCCCATAGCAAGAAGAAAGTGGGCAA...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CAA 90 bp GCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGGAGAAGAGTCTGGGTTaGGTGTGTGTAAAACACAGT +
Preference number: 3 (lower is better)
Translates to: AGEGPTGKAEWEGIVQVEEKSLG*VCVKHS
Trigger: ACTGTGTTTTACACACACCAAACCCAGACTCTTCTC...CTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CAA 90 bp CAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTAAAATTCTGGAGCAGTaGTCTCTCTCCACCTCACTA +
Preference number: 3 (lower is better)
Translates to: QAGEGPTGKAEWEGIVQVKILEQ*SLSTSL
Trigger: TAGTGAGGTGGAGAGAGACAACTGCTCCAGAATTTT...AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR-3UTR CAA 90 bp CAGCGCTCATCCATGAGAACACAGATGCGAACGAGAGGCCCAGGTACCCTCATCACGCTCACATGGGGTTaGAATCCTTCTGCATTTGGG +
Preference number: 3 (lower is better)
Translates to: QRSSMRTQMRTRGPGTLITLTWG*NPSAFG
Trigger: CCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGT...GATGAGGGTACCTGGGCCTCTCGTTCGCATCTGTGTTCTCATGGATGAGCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR GCA 72 bp TTCTTTATTACTTTAGTGTCGGACCTGGGCAGCAGCTaGAGCCCGCTGCCCCGGTTGCCAATGATATCGTTT +
Preference number: 3 (lower is better)
Translates to: FFITLVSDLGSS*SPLPRLPMISF
Trigger: AAACGATATCATTGGCAACCGGGGCAGCGGGCTGCAGCTGCTGCCCAGGTCCGACACTAAAGTAATAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CCA 72 bp TTTCTTCTTGCTATGGGCTGTGGAGCTGAAGTGTTCTaGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTT +
Preference number: 3 (lower is better)
Translates to: FLLAMGCGAEVF*RYRVLEARDPF
Trigger: AAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACTTCAGCTCCACAGCCCATAGCAAGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CCA 72 bp CTTCCTCAGGCAGTGGGGTCTGACCTCACCTGGCTTTaGGACTTGGACATATTCACAGTACGGTTCAGTAAA +
Preference number: 3 (lower is better)
Translates to: LPQAVGSDLTWL*DLDIFTVRFSK
Trigger: TTTACTGAACCGTACTGTGAATATGTCCAAGTCCCAAAGCCAGGTGAGGTCAGACCCCACTGCCTGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR TCA 72 bp CTTCCCCCGCTCTTCACAATCTTTATAGACTTCGAGTaGCTGGAAACCCACCAGCTTCTATCCCTTCTCCCT +
Preference number: 3 (lower is better)
Translates to: LPPLFTIFIDFE*LETHQLLSLLP
Trigger: AGGGAGAAGGGATAGAAGCTGGTGGGTTTCCAGTCACTCGAAGTCTATAAAGATTGTGAAGAGCGGGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR TCA 72 bp TCACTTCCCGCCATCAGAAGTAAATCTGCTCTTTCCTaGGAAGAGTCTGGGTTTGGTGTGTGTAAAACACAG +
Preference number: 3 (lower is better)
Translates to: SLPAIRSKSALS*EESGFGVCKTQ
Trigger: CTGTGTTTTACACACACCAAACCCAGACTCTTCTCAGGAAAGAGCAGATTTACTTCTGATGGCGGGAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR TCA 72 bp TTTTGCATGATGCATTCTCGGTTGTTTGAGATCTGCTaGAAGATGGTCTTACTGGTTTTGCCCTGGAAGATG +
Preference number: 3 (lower is better)
Translates to: FCMMHSRLFEIC*KMVLLVLPWKM
Trigger: CATCTTCCAGGGCAAAACCAGTAAGACCATCTTTCAGCAGATCTCAAACAACCGAGAATGCATCATGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR TCA 72 bp GAACTTGTTGTTTTGCATGATGCATTCTCGGTTGTTTaGGATCTGCTGAAAGATGGTCTTACTGGTTTTGCC +
Preference number: 3 (lower is better)
Translates to: ELVVLHDAFSVV*DLLKDGLTGFA
Trigger: GGCAAAACCAGTAAGACCATCTTTCAGCAGATCTCAAACAACCGAGAATGCATCATGCAAAACAACAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGCCGGGGGCGGACAGCTaGCTGGGGATCGTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGPGADS*LGIVRS
Trigger: GCTCCGCACGATCCCCAGGCAGCTGTCCGCCCCCGG...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCCCTGCACCAGGGCCTTaGCACGGCCCCGCACGGCGA +
Preference number: 4 (lower is better)
Translates to: EWEGIVQVELALHPALFLPAPGP*HGPARR
Trigger: TCGCCGTGCGGGGCCGTGCCAAGGCCCTGGTGCAGG...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGGGGCGGACAGCTGCCTaGGGATCGTGCGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGGRTAA*GSCGAA
Trigger: GGCGGCTCCGCACGATCCCCAGGCAGCTGTCCGCCC...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTGGATCGACCTGGGCAGCAGCTaGAGCCCGCTGCCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: VGWLLWATVMPLSPFAWIDLGSS*SPLPRL
Trigger: CAACCGGGGCAGCGGGCTGCAGCTGCTGCCCAGGTC...GATCCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGGGCCCCGCACGGCGATaGCGTAGGCCCGGAACGAGT +
Preference number: 4 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGGPARR*RRPGTS
Trigger: ACTCGTTCCGGGCCTACGGCATCGCCGTGCGGGGCC...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGCCTGCACCAGGGCCTTaGCACGGCCCCGCACGGCGA +
Preference number: 4 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVPAPGP*HGPARR
Trigger: TCGCCGTGCGGGGCCGTGCCAAGGCCCTGGTGCAGG...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACGAGGGGCGGCTGGTGTaGGCACGCTCACATGGGGTT +
Preference number: 4 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHEGRLV*ARSHGV
Trigger: AACCCCATGTGAGCGTGCCCACACCAGCCGCCCCTC...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACGATGGCGGCACTCGGTaGAACCCAGACACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHDGGTR*NPDTAA
Trigger: GGCAGCTGTGTCTGGGTTGCACCGAGTGCCGCCATC...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp AGTGTTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGGCTGCCTGGGGATCGTaGGGAGCCGCCGCCGTCATG +
Preference number: 4 (lower is better)
Translates to: SVLEVPCFGGPGPICSRGAAWGS*GAAAVM
Trigger: CATGACGGCGGCGGCTCCGCACGATCCCCAGGCAGC...CCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp ATGGTGATGGGCCGGCGCAGTGGGTCGTCCTCCTTCTCCAGCTCTGTCTCCCAGAGCCCTGCACGGAGTTaGCCAGTGCCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: MVMGRRSGSSSFSSSVSQSPARS*PVPWPP
Trigger: AGGAGGCCATGGCACTGGCCAACTCCGTGCAGGGCT...CTGGGAGACAGAGCTGGAGAAGGAGGACGACCCACTGCGCCGGCCCATCACCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCGATGGGCCGGCGCAGTaGGTCGTCCTCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGDGPAQ*VVLLLQ
Trigger: CTGGAGAAGGAGGACGACCCACTGCGCCGGCCCATC...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGGGGAGTGGAGCAGGGGGTaGCCACGGGCAGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LDPTLPVAGDAVVGHSGGEWSRG*PRAGRL
Trigger: CAGTCTCCCTGCCCGTGGCCACCCCCTGCTCCACTC...CCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCAGAGGCACTTGCGGATaGGGCAGCCCTGCACGGAGT +
Preference number: 4 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGRGTCG*GSPARS
Trigger: ACTCCGTGCAGGGCTGCCTCATCCGCAAGTGCCTCT...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTGGATCCAACCCAGACACAGCTaGCGCCAGCGGGTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: VGWLLWATVMPLSPFAWIQPRHS*RQRVLS
Trigger: CGACAGCACCCGCTGGCGGCAGCTGTGTCTGGGTTG...GATCCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGCAACCCAGACACAGCTaGCGCCAGCGGGTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGQPRHS*RQRVLS
Trigger: CGACAGCACCCGCTGGCGGCAGCTGTGTCTGGGTTG...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCGTCCTCCTTCTCCTCAGGCCTCCATCGCTaGTGTCCGGGGTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: DSTRAMVMGRRSGSSSFSSGLHR*CPGSGP
Trigger: TGGCCCAGACCCCGGACAGCAGCGATGGAGGCCTGA...GGAGAAGGAGGACGACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp GCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAGAACCCAGTGCTCCTGGCTCCCCGGATGAGGCAGCCCTaGACGGAGTTGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ASTLVPSVLRENPVLLAPRMRQP*TELASA
Trigger: GGCACTGGCCAACTCCGTGCAGGGCTGCCTCATCCG...GGGAGCCAGGAGCACTGGGTTCTCCCTGAGAACACTGGGCACAAGAGTACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTTCAAGGTGGGGCCGTaGTGGTGGGTTCACCAGGCG +
Preference number: 4 (lower is better)
Translates to: ERPSGRGLFRLSWPCIQPFKVGP*WWVHQA
Trigger: CGCCTGGTGAACCCACCAGCACGGCCCCACCTTGAA...GGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTCGGCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GCAGATGAGGTTACTCCTGAGAACGGGGATCCCTCCACGGCGGATGTCCACACCAGAGGCACTTGCGGATaGGGCAGCCCTGCACGGAGT +
Preference number: 4 (lower is better)
Translates to: ADEVTPENGDPSTADVHTRGTCG*GSPARS
Trigger: ACTCCGTGCAGGGCTGCCTCATCCGCAAGTGCCTCT...GGTGTGGACATCCGCCGTGGAGGGATCCCCGTTCTCAGGAGTAACCTCATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGCGGCAGCACGGCCCTTaGAGATGTGGTTCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: AGEGPTGKAEWEGIVQVERQHGP*RCGSRS
Trigger: TGAGCGGGAACCACATCTTCAAGGGCCGTGCTGCCG...CTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCCTTCCACCCGGGCTGTaGTCCTCGTTGCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: EWEGIVQVELALHPALFLLPPGL*SSLPWL
Trigger: CAGCCATGGCAACGAGGATCACAGCCCGGGTGGAAG...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GCATGGGACAACCTCCAGAGTGGAGCAGGGGGTGGCCACGGGCAGGGAGACTGGGGCCCAGTTCTTATCTaGAGATGGGTGACCCTCAAC +
Preference number: 4 (lower is better)
Translates to: AWDNLQSGAGGGHGQGDWGPVLI*RWVTLN
Trigger: GTTGAGGGTCACCCATCTGCAGATAAGAACTGGGCC...CCAGTCTCCCTGCCCGTGGCCACCCCCTGCTCCACTCTGGAGGTTGTCCCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp AGGCACAGGCCTTTTTCTGACTGGAGTCGACAGCTGGCAGGGTTGCAGGGAGCCGCTGGTTGGGCCAATTaGGATGGCGGCACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: RHRPFSDWSRQLAGLQGAAGWAN*DGGTRC
Trigger: GCACCGAGTGCCGCCATCCCAATTGGCCCAACCAGC...GGCTCCCTGCAACCCTGCCAGCTGTCGACTCCAGTCAGAAAAAGGCCTGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp ATGGTGATGGGCCGGCGCAGTGGGTCGTCCTCCTTCTCCAGCTCTGTCTCCCAGCTCAGGCTCCACATCTaGCTGGTTGGGCCAATTGGG +
Preference number: 4 (lower is better)
Translates to: MVMGRRSGSSSFSSSVSQLRLHI*LVGPIG
Trigger: CCCAATTGGCCCAACCAGCCAGATGTGGAGCCTGAG...CTGGGAGACAGAGCTGGAGAAGGAGGACGACCCACTGCGCCGGCCCATCACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp AGGCACAGGCCTTTTTCTGACTGGAGTCGACAGCTGGCAGGGTTGCAGGGAGCCTTTGGGCTCCAGGCCTaGTCCCGGCTCTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: RHRPFSDWSRQLAGLQGAFGLQA*SRLSRS
Trigger: GGACCTAGAGAGCCGGGACCAGGCCTGGAGCCCAAA...GGCTCCCTGCAACCCTGCCAGCTGTCGACTCCAGTCAGAAAAAGGCCTGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGAGCCCTGCACGGAGTTaGCCAGTGCCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGSPARS*PVPWPP
Trigger: AGGAGGCCATGGCACTGGCCAACTCCGTGCAGGGCT...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACGTGGGTTGGCTGCTCTaGGCCACAGTAATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHVGWLL*ATVMPL
Trigger: CAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCAC...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCGCCACTCGGGTGGGTTaGCTGCTCTGGGCCACAGTA +
Preference number: 4 (lower is better)
Translates to: EWEGIVQVELALHPALFLATRVG*LLWATV
Trigger: TACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGC...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACAGGAGATGCTGTTGTTaGCCACTCGGGTGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHRRCCC*PLGWVG
Trigger: GCCAACCCACCCGAGTGGCCAACAACAGCATCTCCT...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCCGGCCCTTGAAGATGTaGTTCCCGCTCACAACGGGG +
Preference number: 4 (lower is better)
Translates to: ERPSGRGLFRLSWPCIQPRPLKM*FPLTTG
Trigger: CCCCGTTGTGAGCGGGAACCACATCTTCAAGGGCCG...GGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTCGGCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp AGTGTTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGGCCTCCAGAGACAGCTaGGAGGGTGTGGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SVLEVPCFGGPGPICSRGASRDS*EGVVGS
Trigger: GGACCCCACCACACCCTCCCAGCTGTCTCTGGAGGC...CCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CAA 72 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTaGTTGGCCACTCGGGTGGGTTGGCTGCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TLTPLCRLQEML*LATRVGWLLWA
Trigger: GGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CAA 72 bp CCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTaGAGCTGGCCCTGCATCCAGCCCTCTTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PQERPSGRGLFR*SWPCIQPSSSG
Trigger: GCCTGAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CAA 72 bp GTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATaGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VKAPQERPSGRG*FRLSWPCIQPS
Trigger: AGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTGGATCAGAACCAGGCTGGCGTaGAGACGAGGTTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: VGWLLWATVMPLSPFAWIRTRLA*RRGCTG
Trigger: GCCTGTGCAACCTCGTCTTCACGCCAGCCTGGTTCT...GATCCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp ATGGTGATGGGCCGGCGCAGTGGGTCGTCCTCCTTCTCCAGCTCTGTCTCCCAGGCGAAGAAAGATGCCTaGCGCTCGGCAGCGGTAAAT +
Preference number: 4 (lower is better)
Translates to: MVMGRRSGSSSFSSSVSQAKKDA*RSAAVN
Trigger: ATTTACCGCTGCCGAGCGTCAGGCATCTTTCTTCGC...CTGGGAGACAGAGCTGGAGAAGGAGGACGACCCACTGCGCCGGCCCATCACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp CACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCTCGCTGAAGTTCTCTTaGGCCCTGTGGCCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: HSGGLAALGHSNASVPIRSLKFS*ALWPRG
Trigger: ACCTCGAGGCCACAGGGCTCAAGAGAACTTCAGCGA...GCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCCGTCCCCATCCTCGCTaGAGTTCTCTTGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGRPHPR*SSLEPC
Trigger: ACAGGGCTCAAGAGAACTTCAGCGAGGATGGGGACG...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGCAACAAGAGCTATGGTaGTGGGCCGGCGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGQQELW*WAGAVG
Trigger: ACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTG...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGACTGGGCCTCAACCTTaGCCCCACTTTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: AGEGPTGKAEWEGIVQVETGPQP*PHFAGC
Trigger: GCAACCGGCAAAGTGGGGTCAAGGTTGAGGCCCAGT...CTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGCTGCAGGGGGACAGGTaGCATTGGCGGTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVLQGDR*HWRCRS
Trigger: ACTCCTGCACCGCCAATGTCACCTGTCCCCCTGCAG...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp GACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCGTCCTCCTTCTCCGTTCATACCAGGCCCTaGATACCAGGCTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: DSTRAMVMGRRSGSSSFSVHTRP*IPGCSG
Trigger: GCCGCTGCAGCCTGGTATGCAGGGCCTGGTATGAAC...GGAGAAGGAGGACGACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACAGCAGTGCTGATCAATaGTGGCCAGCAGGGCCACTT +
Preference number: 4 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHSSADQ*WPAGPL
Trigger: AAGTGGCCCTGCTGGCCAGCATTGATCAGCACTGCT...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp ATGGTGATGGGCCGGCGCAGTGGGTCGTCCTCCTTCTCCAGCTCTGTCTCCCAGCTTCCATCTTGGCTCTaGCGTGGGAGCAGACGAAGA +
Preference number: 4 (lower is better)
Translates to: MVMGRRSGSSSFSSSVSQLPSWL*RGSRRR
Trigger: TCTTCGTCTGCTCCCACGGCAGAGCCAAGATGGAAG...CTGGGAGACAGAGCTGGAGAAGGAGGACGACCCACTGCGCCGGCCCATCACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCCCAAGCGAAGAAAGATaGCTGACGCTCGGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGPSEER*LTLGSG
Trigger: ACCGCTGCCGAGCGTCAGGCATCTTTCTTCGCTTGG...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGACCCAGCCTAGCATCTaGCTGCACGCTGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GGWCGHAHMGFESFCIWETQPSI*LHAAAP
Trigger: TGGGGCTGCAGCGTGCAGGCAGATGCTAGGCTGGGT...CTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp TTGTTGGCCACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCTTGGGCCAATTGGGATaGCGGCACTCGGTGCAACCC +
Preference number: 4 (lower is better)
Translates to: LLATRVGWLLWATVMPLSLGQLG*RHSVQP
Trigger: GGGTTGCACCGAGTGCCGCCATCCCAATTGGCCCAA...GGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCTTGGGCCAATTGGGATaGCGGCACTCGGTGCAACCC +
Preference number: 4 (lower is better)
Translates to: EWEGIVQVELALHPALFLLGQLG*RHSVQP
Trigger: GGGTTGCACCGAGTGCCGCCATCCCAATTGGCCCAA...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTCAAACTCACGGCCTaGCCCAACACTCAGGGTACG +
Preference number: 4 (lower is better)
Translates to: HSGGLAALGHSNASVPIRVKLTA*PNTQGT
Trigger: CGTACCCTGAGTGTTGGGCCAGGCCGTGAGTTTGAC...GCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGGGCTTCATCCTCACCGCTaGGACTCAGGCCTCCATCGC +
Preference number: 4 (lower is better)
Translates to: LDPTLPVAGDAVVGHSGGLHPHR*DSGLHR
Trigger: GCGATGGAGGCCTGAGTCCCAGCGGTGAGGATGAAG...CCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGCTTCATCCTCACCGCTaGGACTCAGGCCTCCATCGC +
Preference number: 4 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGLHPHR*DSGLHR
Trigger: GCGATGGAGGCCTGAGTCCCAGCGGTGAGGATGAAG...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACAGCTGGGCAGCTGAATaGATGCTCCTGGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHSWAAE*MLLVEV
Trigger: CACCTCTACCAGGAGCATCCATTCAGCTGCCCAGCT...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGACTGGAGTCGACAGCTaGCAGGGTTGCAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVTGVDS*QGCREP
Trigger: GGGCTCCCTGCAACCCTGCCAGCTGTCGACTCCAGT...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGACCTTCTGCCCATTGTaGGCTGCCGAGGGACGTCTG +
Preference number: 4 (lower is better)
Translates to: AGEGPTGKAEWEGIVQVETFCPL*AAEGRL
Trigger: CAGACGTCCCTCGGCAGCCCACAATGGGCAGAAGGT...CTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGGGGCAGCCTTTCCATaGGGTCTCCTGTTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QAGEGPTGKAEWEGIVQVGAAFP*GLLLLP
Trigger: TGGGAGCAACAGGAGACCCCATGGAAAGGCTGCCCC...AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTCCCTCTTGTCATCCCTaGGGCAGCCTTTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: QAGEGPTGKAEWEGIVQVPSCHP*GSLSMG
Trigger: CCCCATGGAAAGGCTGCCCCAGGGATGACAAGAGGG...AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CAGCGCTCATCCATGAGAACACAGATGCGAACGAGAGGCCCAGGTACCCTCATCCTCAGGAGGGGCGGCTaGTGTGGGCACGCTCACATG +
Preference number: 4 (lower is better)
Translates to: QRSSMRTQMRTRGPGTLILRRGG*CGHAHM
Trigger: CATGTGAGCGTGCCCACACCAGCCGCCCCTCCTGAG...GATGAGGGTACCTGGGCCTCTCGTTCGCATCTGTGTTCTCATGGATGAGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAGAACCCAGTGCTCCTGGCTCCCCTCTTCCTCAGGCAGTaGGGTCTGACCTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: ASTLVPSVLRENPVLLAPLFLRQ*GLTSPG
Trigger: GCCAGGTGAGGTCAGACCCCACTGCCTGAGGAAGAG...GGGAGCCAGGAGCACTGGGTTCTCCCTGAGAACACTGGGCACAAGAGTACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CAA 72 bp GTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGGGTaGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VAGDAVVGHSGG*AALGHSNASVP
Trigger: GGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAACAGCATCTCCTGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CAA 72 bp TTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTaGGCCACTCGGGTGGGTTGGCTGCTCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LTPLCRLQEMLL*ATRVGWLLWAT
Trigger: TGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CAA 72 bp GGCTGTGGAGCTGAAGTGTTCTGGAGGTACCGTGTTTaGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GCGAEVFWRYRV*EARDPFVRGGG
Trigger: CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACTTCAGCTCCACAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCCTGCCGAGGGACGTCTaGGAGAATTTTCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGLPRDV*ENFQGG
Trigger: CCCACCTTGAAAATTCTCTCAGACGTCCCTCGGCAG...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCCCCTGCATACCAGGCTaGAGCGGCCCAGGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSPCIPG*SGPGRE
Trigger: TTCCCGACCTGGGCCGCTGCAGCCTGGTATGCAGGG...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp GGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTACTCCCTGCATACCAGGCTaGAGCGGCCCAGGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: GATKQVQRTVPGIEEASTPCIPG*SGPGRE
Trigger: TTCCCGACCTGGGCCGCTGCAGCCTGGTATGCAGGG...AGTACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp CAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTCCATGGCCAAGGCACTaGCCAGGCTGTCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: QAGEGPTGKAEWEGIVQVPWPRH*PGCQTH
Trigger: GTGAGTTTGACAGCCTGGGCAGTGCCTTGGCCATGG...AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTCACCCAACTTCCCCTaGCCTACAATCTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGSPNFP*PTISTG
Trigger: GCCTGTGGAGATTGTAGGGCAGGGGAAGTTGGGTGA...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp ATGGGGGAGGCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATCGGATGAGGCAGCCCTaGACGGAGTTGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: MGEAGRHHPHTTALVSVDRMRQP*TELASA
Trigger: GGCACTGGCCAACTCCGTGCAGGGCTGCCTCATCCG...ATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGCCTCCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACGGTGATGACATGCAGTaGCTCGCTGCTCTGGACATA +
Preference number: 4 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHGDDMQ*LAALDI
Trigger: TATGTCCAGAGCAGCGAGGCACTGCATGTCATCACC...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp TGGGACTTGGACATATTCACAGTACGGTTCAGTAAAGTCCTCTGGGAGCTGGCCGACCTGGGCAGCAGCTaGAGCCCGCTGCCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: WDLDIFTVRFSKVLWELADLGSS*SPLPRL
Trigger: CAACCGGGGCAGCGGGCTGCAGCTGCTGCCCAGGTC...GGCCAGCTCCCAGAGGACTTTACTGAACCGTACTGTGAATATGTCCAAGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp AGTGTTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGGCCGTTCTCATTCACTaGTATGCCGGCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: SVLEVPCFGGPGPICSRGAVLIH*YAGSTA
Trigger: GGCCGTGCTGCCGGCATAGCAGTGAATGAGAACGGC...CCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACTGGTGCAGAAGACACTaGGGTTGCTGTGGTAACCAC +
Preference number: 4 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHWCRRH*GCCGNH
Trigger: GTGGTTACCACAGCAACCGCAGTGTCTTCTGCACCA...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CAGCTGCAGCCCGCTGCCCCGGTTGCCAATGATATCGTTTTCAATGACGATGGTGGCCACCAGCCTCCATaGTCACCTCACAGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: QLQPAAPVANDIVFNDDGGHQPP*SPHRAL
Trigger: GAGCGCCCTGTGAGGTGACCATGGAGGCTGGTGGCC...ACCATCGTCATTGAAAACGATATCATTGGCAACCGGGGCAGCGGGCTGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGGGCCACCAGCCTCCATaGTCACCTCACAGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMGHQPP*SPHRAL
Trigger: GAGCGCCCTGTGAGGTGACCATGGAGGCTGGTGGCC...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGGGCTCCACATCTGGCTaGTTGGGCCAATTGGGATGG +
Preference number: 4 (lower is better)
Translates to: AGEGPTGKAEWEGIVQVEGSTSG*LGQLGW
Trigger: CCATCCCAATTGGCCCAACCAGCCAGATGTGGAGCC...CTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAGAACCCAGTGCTCCTGGCTCCCCTCAGGCTCCACATCTaGCTGGTTGGGCCAATTGGG +
Preference number: 4 (lower is better)
Translates to: ASTLVPSVLRENPVLLAPLRLHI*LVGPIG
Trigger: CCCAATTGGCCCAACCAGCCAGATGTGGAGCCTGAG...GGGAGCCAGGAGCACTGGGTTCTCCCTGAGAACACTGGGCACAAGAGTACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGTTCGGTCATACAGGCTaGCCATGGCCAAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: AGEGPTGKAEWEGIVQVEFGHTG*PWPRHC
Trigger: GCAGTGCCTTGGCCATGGCCAGCCTGTATGACCGAA...CTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp AGGGGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGCCCCAATACAGGGCGTaGGCCCTGCACTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: RGGWCGHAHMGFESFCIWPQYRA*ALHLVG
Trigger: TCCTACCAAGTGCAGGGCCCACGCCCTGTATTGGGG...CCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp ATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTGTGGGGCCGTGCTGGTaGGTTCACCAGGCGCCACGT +
Preference number: 4 (lower is better)
Translates to: IGATKQVQRTVPGIEEASVGPCW*VHQAPR
Trigger: ACGTGGCGCCTGGTGAACCCACCAGCACGGCCCCAC...ACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGGAGCACACAGGTGAGTaGGGGGTCAGGCAATGGACC +
Preference number: 4 (lower is better)
Translates to: GGWCGHAHMGFESFCIWEEHTGE*GVRQWT
Trigger: GGTCCATTGCCTGACCCCCCACTCACCTGTGTGCTC...CTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CAA 72 bp TTGCCCCGGAGCTCCACTTTGCACTGGGCCTCAACCTaGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LPRSSTLHWAST*TPLCRLQEMLL
Trigger: CAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GCCTCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCCAACAAGAGCTATGGTaGTGGGCCGGCGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: ASVVIDTIAPELHFALGLQQELW*WAGAVG
Trigger: ACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTG...GAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CAGCTGCAGCCCGCTGCCCCGGTTGCCAATGATATCGTTTTCAATGACGATGGTGATGGCGGCACTCGGTaGAACCCAGACACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QLQPAAPVANDIVFNDDGDGGTR*NPDTAA
Trigger: GGCAGCTGTGTCTGGGTTGCACCGAGTGCCGCCATC...ACCATCGTCATTGAAAACGATATCATTGGCAACCGGGGCAGCGGGCTGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCTCCTTCTGCAGCTCCTaGTGCAGTGAGTTCAGCACT +
Preference number: 4 (lower is better)
Translates to: HSGGLAALGHSNASVPIRSFCSS*CSEFST
Trigger: AGTGCTGAACTCACTGCAGCAGGAGCTGCAGAAGGA...GCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTTGCCAAGGACGACAATaGCAGAGCGAAGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: QAGEGPTGKAEWEGIVQVCQGRQ*QSEGHG
Trigger: ACCATGGCCTTCGCTCTGGCATTGTCGTCCTTGGCA...AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GCAGATGAGGTTACTCCTGAGAACGGGGATCCCTCCACGGCGGATGTCCACACCCATGCAGTGCCTCGCTaGTCTGGACATAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: ADEVTPENGDPSTADVHTHAVPR*SGHRVL
Trigger: CAGGACTCTATGTCCAGAGCAGCGAGGCACTGCATG...GGTGTGGACATCCGCCGTGGAGGGATCCCCGTTCTCAGGAGTAACCTCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCACCTTGACCCCACTTTaGCGGTTGCAGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: EWEGIVQVELALHPALFLTLTPL*RLQEML
Trigger: CAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp CAACCAGAATGTGAAAGCGAAAGCACGGACCAATCAGAACACAGCCCAAGCAGAGGCCCCGCACGGCGATaGCGTAGGCCCGGAACGAGT +
Preference number: 4 (lower is better)
Translates to: QPECESESTDQSEHSPSRGPARR*RRPGTS
Trigger: ACTCGTTCCGGGCCTACGGCATCGCCGTGCGGGGCC...TCTGCTTGGGCTGTGTTCTGATTGGTCCGTGCTTTCGCTTTCACATTCTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACAGAAGACACTGCGGTTaGTGTGGTAACCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHRRHCG*CGNHLP
Trigger: TGGAAGGTGGTTACCACAGCAACCGCAGTGTCTTCT...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAGAACCCAGTGCTCCTGGCTCCCGTCCTCACAGGATGGTaGAGAAGACACTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: ASTLVPSVLRENPVLLAPVLTGW*RRHCGC
Trigger: GCAACCGCAGTGTCTTCTGCACCATCCTGTGAGGAC...GGGAGCCAGGAGCACTGGGTTCTCCCTGAGAACACTGGGCACAAGAGTACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp CCAACAGAGCAGCACCTAGGGCCAATAGAACCAGCCACGCAGCCAAGTGCACGAAGGTTGAGCTGGCCCTaGATCCAGCCCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PTEQHLGPIEPATQPSARRLSWP*IQPSSS
Trigger: TGAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCT...TCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTGCTGCTCTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GCATGGGACAACCTCCAGAGTGGAGCAGGGGGTGGCCACGGGCAGGGAGACTGGAGTCCAAGGCATTCTTaGTCCATGTCTTGGATGCAA +
Preference number: 4 (lower is better)
Translates to: AWDNLQSGAGGGHGQGDWSPRHS*SMSWMQ
Trigger: TTGCATCCAAGACATGGACCAAGAATGCCTTGGACT...CCAGTCTCCCTGCCCGTGGCCACCCCCTGCTCCACTCTGGAGGTTGTCCCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACCTCTTCGTACACACCTaGGAAGAGCACAATTCGGTC +
Preference number: 4 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHLFVHT*EEHNSV
Trigger: GACCGAATTGTGCTCTTCCCAGGTGTGTACGAAGAG...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp AGTGTTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGGGGCTGGTAGGGCTCTaGCTGCCCTCGATAACAATG +
Preference number: 4 (lower is better)
Translates to: SVLEVPCFGGPGPICSRGGLVGL*LPSITM
Trigger: CATTGTTATCGAGGGCAGCCAGAGCCCTACCAGCCC...CCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACT
59% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp AGGCACAGGCCTTTTTCTGACTGGAGTCGACAGCTGGCAGGGTTGCAGGGAGCCAGCTGGGCAGCTGAATaGATGCTCCTGGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RHRPFSDWSRQLAGLQGASWAAE*MLLVEV
Trigger: CACCTCTACCAGGAGCATCCATTCAGCTGCCCAGCT...GGCTCCCTGCAACCCTGCCAGCTGTCGACTCCAGTCAGAAAAAGGCCTGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGGGTCAGCACTAGGCAGCTaGGCAGCTGAATGGATGCTC +
Preference number: 4 (lower is better)
Translates to: LDPTLPVAGDAVVGHSGGSALGS*AAEWML
Trigger: GAGCATCCATTCAGCTGCCCAGCTGCCTAGTGCTGA...CCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGTGTTGGCCACTCGGGTaGGTTGGCTGCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMCWPLG*VGCSGP
Trigger: TGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACA...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCAGCTCCACTTTGCACTaGGCCTCAACCTTGACCCCA +
Preference number: 4 (lower is better)
Translates to: EWEGIVQVELALHPALFLSSTLH*ASTLTP
Trigger: TGGGGTCAAGGTTGAGGCCCAGTGCAAAGTGGAGCT...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGCACAATCCCTGGGTGTaGGCCTGGCTTCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVHNPWV*AWLLQG
Trigger: TCCCTGAAGAAGCCAGGCCCACACCCAGGGATTGTG...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCAGAGAATTTTCAAGGTaGGGCCGTGCTGGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGREFSR*GRAGGF
Trigger: GAACCCACCAGCACGGCCCCACCTTGAAAATTCTCT...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGGAGCTCTCTGGGGATaGAGTAGAGCCTTGTGCATC +
Preference number: 4 (lower is better)
Translates to: QAGEGPTGKAEWEGIVQVGALWG*SRALCI
Trigger: GATGCACAAGGCTCTACTCCATCCCCAGAGAGCTCC...AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCCATTTGGGAGCTCTCTaGGGATGGAGTAGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGHLGAL*GWSRAL
Trigger: CAAGGCTCTACTCCATCCCCAGAGAGCTCCCAAATG...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGTCAGGCAGTGGGGTCTaGCCTCACCTGGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: DKAESAQYPEREQRKATESGSGV*PHLALG
Trigger: TCCCAAAGCCAGGTGAGGTCAGACCCCACTGCCTGA...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAGAACCCAGTGCTCCTGGCTCCCGGCCCAGTTCTTATCTaGAGATGGGTGACCCTCAAC +
Preference number: 4 (lower is better)
Translates to: ASTLVPSVLRENPVLLAPGPVLI*RWVTLN
Trigger: GTTGAGGGTCACCCATCTGCAGATAAGAACTGGGCC...GGGAGCCAGGAGCACTGGGTTCTCCCTGAGAACACTGGGCACAAGAGTACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp TGGGACTTGGACATATTCACAGTACGGTTCAGTAAAGTCCTCTGGGAGCTGGCCTCAGGCCTCCATCGCTaGTGTCCGGGGTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: WDLDIFTVRFSKVLWELASGLHR*CPGSGP
Trigger: TGGCCCAGACCCCGGACAGCAGCGATGGAGGCCTGA...GGCCAGCTCCCAGAGGACTTTACTGAACCGTACTGTGAATATGTCCAAGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAGAACCCAGTGCTCCTGGCTCCCTCCTTCTGCAGCTCCTaGTGCAGTGAGTTCAGCACT +
Preference number: 4 (lower is better)
Translates to: ASTLVPSVLRENPVLLAPSFCSS*CSEFST
Trigger: AGTGCTGAACTCACTGCAGCAGGAGCTGCAGAAGGA...GGGAGCCAGGAGCACTGGGTTCTCCCTGAGAACACTGGGCACAAGAGTACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCATGCAGTGCCTCGCTaGTCTGGACATAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GGWCGHAHMGFESFCIWEHAVPR*SGHRVL
Trigger: CAGGACTCTATGTCCAGAGCAGCGAGGCACTGCATG...CTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTACTGCCGGTTGCAGGAGATaGTGTTGTTGGCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: GATKQVQRTVPGIEEASTAGCRR*CCWPLG
Trigger: CCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGC...AGTACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGACCTTGACCCCACTTTaGCGGTTGCAGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVTLTPL*RLQEML
Trigger: CAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCAAGATGATGTTTTCCTaGACCAGGGCCTTGGCACGG +
Preference number: 4 (lower is better)
Translates to: EWEGIVQVELALHPALFLKMMFS*TRALAR
Trigger: CCGTGCCAAGGCCCTGGTGCAGGAAAACATCATCTT...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGCTGCCCATTGTGGGCTaGCGAGGGACGTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMLPIVG*RGTSER
Trigger: TCTCTCAGACGTCCCTCGGCAGCCCACAATGGGCAG...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp TTTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGAGCCTAGCATCTGCCTaGACGCTGCAGCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: FTATHIGATKQVQRTVPGSLASA*TLQPHL
Trigger: CAGGTGGGGCTGCAGCGTGCAGGCAGATGCTAGGCT...CCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGAGGCCAGTACTCTTGTaGCCAGTGTTCTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: AGEGPTGKAEWEGIVQVERPVLL*PVFSGR
Trigger: TCTCCCTGAGAACACTGGGCACAAGAGTACTGGCCT...CTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GACAGTGCCAGGGATAGAAGAGGCCAGTACTCTTGTGCCCAGTGTTCTCAGGGACCCGGGCCATGGACCTaGATGTGCCCGTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: DSARDRRGQYSCAQCSQGPGPWT*MCPFSK
Trigger: CTTTGAGAACGGGCACATCCAGGTCCATGGCCCGGG...TCCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTTCTATCCCTGGCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GACAGTGCCAGGGATAGAAGAGGCCAGTACTCTTGTGCCCAGTGTTCTCAGGGACAAGTACCCGGGCCATaGACCTGGATGTGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: DSARDRRGQYSCAQCSQGQVPGP*TWMCPF
Trigger: GAACGGGCACATCCAGGTCCATGGCCCGGGTACTTG...TCCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTTCTATCCCTGGCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTGGATCGTACAGAACTTCACTTaGCAAGTACCCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: VGWLLWATVMPLSPFAWIVQNFT*QVPGPW
Trigger: CCATGGCCCGGGTACTTGCCAAGTGAAGTTCTGTAC...GATCCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp ATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTTTTGGGCTCCAGGCCTaGTCCCGGCTCTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: IGATKQVQRTVPGIEEASFGLQA*SRLSRS
Trigger: GGACCTAGAGAGCCGGGACCAGGCCTGGAGCCCAAA...ACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp AGTGTTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGTCAGCACTAGGCAGCTaGGCAGCTGAATGGATGCTC +
Preference number: 4 (lower is better)
Translates to: SVLEVPCFGGPGPICSRGSALGS*AAEWML
Trigger: GAGCATCCATTCAGCTGCCCAGCTGCCTAGTGCTGA...CCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGGGTGTTTCCTTCCATCTTaGCTCTGCCGTGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LDPTLPVAGDAVVGHSGGCFLPS*LCRGSR
Trigger: TCTGCTCCCACGGCAGAGCCAAGATGGAAGGAAACA...CCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGCCAGAGCGAAGGCCATaGTGGATCTGGTTACACAGT +
Preference number: 4 (lower is better)
Translates to: AGEGPTGKAEWEGIVQVEPERRP*WIWLHS
Trigger: ACTGTGTAACCAGATCCACCATGGCCTTCGCTCTGG...CTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCCTGTCCCCATTCGCGTaGATCACATTGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGLSPFA*ITLVMT
Trigger: TGTCATCACCAATGTGATCCACGCGAATGGGGACAG...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GCCTCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCGTGGGTTGGCTGCTCTaGGCCACAGTAATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ASVVIDTIAPELHFALGLVGWLL*ATVMPL
Trigger: CAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCAC...GAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp ATGGGGGAGGCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATGGCAGCCACAATCCCTaGGTGTGGGCCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: MGEAGRHHPHTTALVSVDGSHNP*VWAWLL
Trigger: AAGAAGCCAGGCCCACACCCAGGGATTGTGGCTGCC...ATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGCCTCCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGAGGCCTTTTTCTGACTaGAGTCGACAGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVRPFSD*SRQLAG
Trigger: CCCTGCCAGCTGTCGACTCCAGTCAGAAAAAGGCCT...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCTGTGTCCTCACAGGATaGTGCAGAAGACACTGCGGT +
Preference number: 4 (lower is better)
Translates to: EWEGIVQVELALHPALFLCVLTG*CRRHCG
Trigger: ACCGCAGTGTCTTCTGCACCATCCTGTGAGGACACA...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CAGCGCTCATCCATGAGAACACAGATGCGAACGAGAGGCCCAGGTACCCTCATCGGAGGTACCGTGTTTTaGAGGCCCGGGACCCATTTG +
Preference number: 4 (lower is better)
Translates to: QRSSMRTQMRTRGPGTLIGGTVF*RPGTHL
Trigger: CAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCC...GATGAGGGTACCTGGGCCTCTCGTTCGCATCTGTGTTCTCATGGATGAGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GACAGTGCCAGGGATAGAAGAGGCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAAGCCAAGGCACAGAGTaGGGAGGCTTGGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: DSARDRRGQYSCAQCSQGSQGTE*GGLGGS
Trigger: TGACCCTCCCAAGCCTCCCCACTCTGTGCCTTGGCT...TCCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTTCTATCCCTGGCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGACCCCAGGCTGGATCTaGGGACACACAGTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: GGWCGHAHMGFESFCIWETPGWI*GHTVRS
Trigger: ACTTCTGACTGTGTGTCCCCAGATCCAGCCTGGGGT...CTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CAA 72 bp CTCCACTTTGCACTGGGCCTCAACCTTGACCCCACTTaGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCG +
Preference number: 4 (lower is better)
Translates to: LHFALGLNLDPT*PVAGDAVVGHS
Trigger: CGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGTTGAGGCCCAGTGCAAAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGAAGAACCAGGCTGGCGTaGAGACGAGGTTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGRTRLA*RRGCTG
Trigger: GCCTGTGCAACCTCGTCTTCACGCCAGCCTGGTTCT...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp CTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGGGTTATCTGCAGATGGGTaGCCCTCAACAGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LDPTLPVAGDAVVGHSGGLSADG*PSTVTE
Trigger: CTCTGTGACTGTTGAGGGTCACCCATCTGCAGATAA...CCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGTCGCTGAAGTTCTCTTaGGCCCTGTGGCCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: DKAESAQYPEREQRKATESLKFS*ALWPRG
Trigger: ACCTCGAGGCCACAGGGCTCAAGAGAACTTCAGCGA...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp TTGTTGGCCACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCTTTTGCCCTGGAAGATaGTGTTTTCCTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: LLATRVGWLLWATVMPLSFCPGR*CFPAPG
Trigger: CCCTGGTGCAGGAAAACATCATCTTCCAGGGCAAAA...GGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCTTTTGCCCTGGAAGATaGTGTTTTCCTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: EWEGIVQVELALHPALFLFCPGR*CFPAPG
Trigger: CCCTGGTGCAGGAAAACATCATCTTCCAGGGCAAAA...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GCATGGGACAACCTCCAGAGTGGAGCAGGGGGTGGCCACGGGCAGGGAGACTGGACTTGTTGTTTTGCATaGTGCATTCTCGGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: AWDNLQSGAGGGHGQGDWTCCFA*CILGCL
Trigger: CAAACAACCGAGAATGCATCATGCAAAACAACAAGT...CCAGTCTCCCTGCCCGTGGCCACCCCCTGCTCCACTCTGGAGGTTGTCCCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp TTGTTGGCCACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCTACATTGAGGCAGAGTaGCTAAAGGACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLATRVGWLLWATVMPLSYIEAE*LKDSSS
Trigger: GCTGCTGCTGTCCTTTAGTCACTCTGCCTCAATGTA...GGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp CCAACAGAGCAGCACCTAGGGCCAATAGAACCAGCCACGCAGCCAAGTGCACGAACCAGCGCTCATCCATaGGAACACAGATGCGAACGA +
Preference number: 4 (lower is better)
Translates to: PTEQHLGPIEPATQPSARTSAHP*EHRCER
Trigger: TCGTTCGCATCTGTGTTCTCATGGATGAGCGCTGGT...TCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTGCTGCTCTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp TTTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGGGGGATTGTTCAGGTTaGGCTGGCCCTGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: FTATHIGATKQVQRTVPGGDCSG*AGPASS
Trigger: GCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCC...CCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAAA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGACCAAGTGCACGACAGTaGCCCCAGCAGGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGPSARQ*PQQAGE
Trigger: TTCACCAGCCTGCTGGGGTCACTGTCGTGCACTTGG...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp AGGGGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGAGTAGGCTAAGATCATaGGCCACAGCTCCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RGGWCGHAHMGFESFCIWSRLRS*ATAPRG
Trigger: TCCCCTTGGAGCTGTGGCGCATGATCTTAGCCTACT...CCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCCCATGGCCAAGGCACTaGCCAGGCTGTCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSPWPRH*PGCQTH
Trigger: GTGAGTTTGACAGCCTGGGCAGTGCCTTGGCCATGG...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp AGGCACAGGCCTTTTTCTGACTGGAGTCGACAGCTGGCAGGGTTGCAGGGAGCCCACAGGGGCACGTTGTaGAGGAAGATATGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: RHRPFSDWSRQLAGLQGAHRGTL*RKIWVF
Trigger: AAACACCCATATCTTCCTGCACAACGTGCCCCTGTG...GGCTCCCTGCAACCCTGCCAGCTGTCGACTCCAGTCAGAAAAAGGCCTGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCCACAGGGGCACGTTGTaGAGGAAGATATGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: EWEGIVQVELALHPALFLHRGTL*RKIWVF
Trigger: AAACACCCATATCTTCCTGCACAACGTGCCCCTGTG...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GCCTCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCCACGGAGTTGGCCAGTaGCATGGCCTCCTTATCCTT +
Preference number: 4 (lower is better)
Translates to: ASVVIDTIAPELHFALGLHGVGQ*HGLLIL
Trigger: AAGGATAAGGAGGCCATGGCACTGGCCAACTCCGTG...GAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp ATGGGGGAGGCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATCCAAGCGAAGAAAGATaGCTGACGCTCGGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: MGEAGRHHPHTTALVSVDPSEER*LTLGSG
Trigger: ACCGCTGCCGAGCGTCAGGCATCTTTCTTCGCTTGG...ATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGCCTCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp AGGGGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGACATTGGTGATGACATaGAGTGCCTCGCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RGGWCGHAHMGFESFCIWTLVMT*SASLLW
Trigger: CCAGAGCAGCGAGGCACTGCATGTCATCACCAATGT...CCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCGTCCTCCTTCTCCATTAACCTGGCAGGATaGATGGGACAACCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: DSTRAMVMGRRSGSSSFSINLAG*MGQPPE
Trigger: CTCTGGAGGTTGTCCCATGCATCCTGCCAGGTTAAT...GGAGAAGGAGGACGACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGAAGCCACGCAGCCAAGTaGACGACAGTGACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGSHAAK*TTVTPA
Trigger: TGCTGGGGTCACTGTCGTGCACTTGGCTGCGTGGCT...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp AGGCACAGGCCTTTTTCTGACTGGAGTCGACAGCTGGCAGGGTTGCAGGGAGCCCTCTTCGTACACACCTaGGAAGAGCACAATTCGGTC +
Preference number: 4 (lower is better)
Translates to: RHRPFSDWSRQLAGLQGALFVHT*EEHNSV
Trigger: GACCGAATTGTGCTCTTCCCAGGTGTGTACGAAGAG...GGCTCCCTGCAACCCTGCCAGCTGTCGACTCCAGTCAGAAAAAGGCCTGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCGTTCTTATCTGCAGATaGGTGACCCTCAACAGTCAC +
Preference number: 4 (lower is better)
Translates to: ERPSGRGLFRLSWPCIQPVLICR*VTLNSH
Trigger: GTGACTGTTGAGGGTCACCCATCTGCAGATAAGAAC...GGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTCGGCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGATCTTGGCTCTGCCGTaGGAGCAGACGAAGACGCCT +
Preference number: 4 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMILALP*EQTKTP
Trigger: AGGCGTCTTCGTCTGCTCCCACGGCAGAGCCAAGAT...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp ATGGGGGAGGCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATTGGTTGCTGGTGACATaGGGGAGGCTGGACGACATC +
Preference number: 4 (lower is better)
Translates to: MGEAGRHHPHTTALVSVDWLLVT*GRLDDI
Trigger: GATGTCGTCCAGCCTCCCCCATGTCACCAGCAACCA...ATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGCCTCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGTGGTTGCTGGTGACATaGGGGAGGCTGGACGACATC +
Preference number: 4 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMWLLVT*GRLDDI
Trigger: GATGTCGTCCAGCCTCCCCCATGTCACCAGCAACCA...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTCTGGAGCCATCCTTCTaGCTAAATACTGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: QAGEGPTGKAEWEGIVQVLEPSF*LNTATP
Trigger: TGGAGTGGCAGTATTTAGCCAGAAGGATGGCTCCAG...AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp ATTAATACTGTTAGACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCGATGGGCCGGCGCAGTaGGTCGTCCTCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: INTVRLNKSYGDGPAQWVDGPAQ*VVLLLQ
Trigger: CTGGAGAAGGAGGACGACCCACTGCGCCGGCCCATC...GACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTCTAACAGTATTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CTCGCTGGAGCCATCCTTCTGGCTAAATACTGCCACTCCATACAGGCCATTGTAGCCACTCGGGTGGGTTaGCTGCTCTGGGCCACAGTA +
Preference number: 4 (lower is better)
Translates to: LAGAILLAKYCHSIQAIVATRVG*LLWATV
Trigger: TACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGC...TACAATGGCCTGTATGGAGTGGCAGTATTTAGCCAGAAGGATGGCTCCAGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CTTGTTAGCGTAGATGGTATTTCCTTCTATGAGGCCTTTGCCTTCGTCTCCCACCACGGGCAGGGAGACTaGCAGGAGGCTGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LVSVDGISFYEAFAFVSHHGQGD*QEAAAG
Trigger: CCCTGCAGCAGCCTCCTGCCAGTCTCCCTGCCCGTG...GTGGGAGACGAAGGCAAAGGCCTCATAGAAGGAAATACCATCTACGCTAACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGAGCAGGGAGAGCTATGTaGAGGTGGCAGTGTCTCGGC +
Preference number: 4 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGAGRAM*RWQCLG
Trigger: GCCGAGACACTGCCACCTCCACATAGCTCTCCCTGC...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGGGGTGCTGTCGAGACTaGGGATCAGTTCATACCAGG +
Preference number: 4 (lower is better)
Translates to: DKAESAQYPEREQRKATEGCCRD*GSVHTR
Trigger: CCTGGTATGAACTGATCCTCAGTCTCGACAGCACCC...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGCAAGGTAATGCTGCTTaGAGGCTTCTCTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGQGNAA*RLLSKT
Trigger: AGTCTTGGAGAGAAGCCTTCAAGCAGCATTACCTTG...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp CCAACAGAGCAGCACCTAGGGCCAATAGAACCAGCCACGCAGCCAAGTGCACGATTATCTGCAGATGGGTaGCCCTCAACAGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: PTEQHLGPIEPATQPSARLSADG*PSTVTE
Trigger: CTCTGTGACTGTTGAGGGTCACCCATCTGCAGATAA...TCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTGCTGCTCTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp CTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGGGACTGATTCTCACGGATaGCATTTTCTCACAACGGGG +
Preference number: 4 (lower is better)
Translates to: LDPTLPVAGDAVVGHSGGTDSHG*HFLTTG
Trigger: CCCCGTTGTGAGAAAATGTCATCCGTGAGAATCAGT...CCCACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp CTCGCTGGAGCCATCCTTCTGGCTAAATACTGCCACTCCATACAGGCCATTGTAACTGGGCCTCAACCTTaGCCCCACTTTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: LAGAILLAKYCHSIQAIVTGPQP*PHFAGC
Trigger: GCAACCGGCAAAGTGGGGTCAAGGTTGAGGCCCAGT...TACAATGGCCTGTATGGAGTGGCAGTATTTAGCCAGAAGGATGGCTCCAGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCAGCGGTGCTGAGACCTaGATTAGGATGGGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSSGAET*IRMGAV
Trigger: AACTGCCCCCATCCTAATTCAGGTCTCAGCACCGCT...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GCAGATGAGGTTACTCCTGAGAACGGGGATCCCTCCACGGCGGATGTCCACACCTTGGCGGTGCAGGAGTaGTACCAACTACAGCAAATA +
Preference number: 4 (lower is better)
Translates to: ADEVTPENGDPSTADVHTLAVQE*YQLQQI
Trigger: TATTTGCTGTAGTTGGTATCACTCCTGCACCGCCAA...GGTGTGGACATCCGCCGTGGAGGGATCCCCGTTCTCAGGAGTAACCTCATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GACAGTGCCAGGGATAGAAGAGGCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAAAGTGCTCAGTACCCTaGGAGGGAGCAGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: DSARDRRGQYSCAQCSQGKCSVP*EGAEKG
Trigger: GCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTT...TCCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTTCTATCCCTGGCACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCAGCAGTGCTGATCAATaGTGGCCAGCAGGGCCACTT +
Preference number: 4 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSSSADQ*WPAGPL
Trigger: AAGTGGCCCTGCTGGCCAGCATTGATCAGCACTGCT...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp GACAGTGCCAGGGATAGAAGAGGCCAGTACTCTTGTGCCCAGTGTTCTCAGGGACACGGAGTTGGCCAGTaGCATGGCCTCCTTATCCTT +
Preference number: 4 (lower is better)
Translates to: DSARDRRGQYSCAQCSQGHGVGQ*HGLLIL
Trigger: AAGGATAAGGAGGCCATGGCACTGGCCAACTCCGTG...TCCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTTCTATCCCTGGCACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GACAGTGCCAGGGATAGAAGAGGCCAGTACTCTTGTGCCCAGTGTTCTCAGGGACTTCCATCTTGGCTCTaGCGTGGGAGCAGACGAAGA +
Preference number: 4 (lower is better)
Translates to: DSARDRRGQYSCAQCSQGLPSWL*RGSRRR
Trigger: TCTTCGTCTGCTCCCACGGCAGAGCCAAGATGGAAG...TCCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTTCTATCCCTGGCACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGTGTGGTAAATGTTGTTaGCGGCAATCAAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVCGKCC*RQSSHR
Trigger: GCGGTGGCTTGATTGCCGGCAACAACATTTACCACA...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACGTCTACACCAGCCTCTaGATTGTGGTAAATGTTGTT +
Preference number: 4 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHVYTSL*IVVNVV
Trigger: AACAACATTTACCACAATGCAGAGGCTGGTGTAGAC...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp CTCGCTGGAGCCATCCTTCTGGCTAAATACTGCCACTCCATACAGGCCATTGTAGCCGGTTGCAGGAGATaGTGTTGTTGGCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: LAGAILLAKYCHSIQAIVAGCRR*CCWPLG
Trigger: CCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGC...TACAATGGCCTGTATGGAGTGGCAGTATTTAGCCAGAAGGATGGCTCCAGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CAACCAGAATGTGAAAGCGAAAGCACGGACCAATCAGAACACAGCCCAAGCAGAAGACTGGCAGGAGGCTaGTGCAGGGGGACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: QPECESESTDQSEHSPSRRLAGG*CRGTGD
Trigger: GTCACCTGTCCCCCTGCAGCAGCCTCCTGCCAGTCT...TCTGCTTGGGCTGTGTTCTGATTGGTCCGTGCTTTCGCTTTCACATTCTGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGGGCTGTGATCCTCGTTaGCATGGCTGTCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: DKAESAQYPEREQRKATEGCDPR*HGCHLL
Trigger: CAGAAGGTGACAGCCATGGCAACGAGGATCACAGCC...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp TTTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGAGCCTTGTGCATCCCTaGCCACCCAGCCTAGCATCT +
Preference number: 4 (lower is better)
Translates to: FTATHIGATKQVQRTVPGSLVHP*PPSLAS
Trigger: AGATGCTAGGCTGGGTGGGCAGGGATGCACAAGGCT...CCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp AGGGGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGGGTTTGAATCCTTCTaGATTTGGGAGCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RGGWCGHAHMGFESFCIWGFESF*IWELSG
Trigger: CCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCC...CCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GACAGTGCCAGGGATAGAAGAGGCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAAGTGCTGATCAATGCTaGCCAGCAGGGCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: DSARDRRGQYSCAQCSQGSADQC*PAGPLH
Trigger: GTGAAGTGGCCCTGCTGGCCAGCATTGATCAGCACT...TCCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTTCTATCCCTGGCACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CAGCGCTCATCCATGAGAACACAGATGCGAACGAGAGGCCCAGGTACCCTCATCGGTTGCACAGGCGTGTaGTTGAGCAGTGCTGATCAA +
Preference number: 4 (lower is better)
Translates to: QRSSMRTQMRTRGPGTLIGCTGV*LSSADQ
Trigger: TTGATCAGCACTGCTCAACCACACGCCTGTGCAACC...GATGAGGGTACCTGGGCCTCTCGTTCGCATCTGTGTTCTCATGGATGAGCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CTCGCTGGAGCCATCCTTCTGGCTAAATACTGCCACTCCATACAGGCCATTGTACCCGGGCCATGGACCTaGATGTGCCCGTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LAGAILLAKYCHSIQAIVPGPWT*MCPFSK
Trigger: CTTTGAGAACGGGCACATCCAGGTCCATGGCCCGGG...TACAATGGCCTGTATGGAGTGGCAGTATTTAGCCAGAAGGATGGCTCCAGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GCTTACTGTGGCTCTAGAGGACTCGTTCAGGCAACCCCAAGCACTCACTTTTTCCAAGTACCCGGGCCATaGACCTGGATGTGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: AYCGSRGLVQATPSTHFFQVPGP*TWMCPF
Trigger: GAACGGGCACATCCAGGTCCATGGCCCGGGTACTTG...GAAAAAGTGAGTGCTTGGGGTTGCCTGAACGAGTCCTCTAGAGCCACAGTAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGAAATGTCACAGGTCTTTaGGCTCCAGGCCTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGNVTGL*APGLVP
Trigger: CGGGACCAGGCCTGGAGCCCAAAGACCTGTGACATT...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CCAACAGAGCAGCACCTAGGGCCAATAGAACCAGCCACGCAGCCAAGTGCACGAGAGCGAAGGCCATGGTaGATCTGGTTACACAGTATG +
Preference number: 4 (lower is better)
Translates to: PTEQHLGPIEPATQPSARERRPW*IWLHSM
Trigger: CATACTGTGTAACCAGATCCACCATGGCCTTCGCTC...TCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTGCTGCTCTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CAACCAGAATGTGAAAGCGAAAGCACGGACCAATCAGAACACAGCCCAAGCAGATGTTGGCCACTCGGGTaGGTTGGCTGCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: QPECESESTDQSEHSPSRCWPLG*VGCSGP
Trigger: TGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACA...TCTGCTTGGGCTGTGTTCTGATTGGTCCGTGCTTTCGCTTTCACATTCTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCAGCTCCACTTTGCACTaGGCCTCAACCTTGACCCCA +
Preference number: 4 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSSSTLH*ASTLTP
Trigger: TGGGGTCAAGGTTGAGGCCCAGTGCAAAGTGGAGCT...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGCCAAGCAGAAGCAACTaGAACAGCTGTGCATTGCAG +
Preference number: 4 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVPSRSN*NSCALQ
Trigger: CTGCAATGCACAGCTGTTCCAGTTGCTTCTGCTTGG...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCACTTTCTTCTTGCTATaGGCTGTGGAGCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: ERPSGRGLFRLSWPCIQPTFFLL*AVELKC
Trigger: ACACTTCAGCTCCACAGCCCATAGCAAGAAGAAAGT...GGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTCGGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CAGCGCTCATCCATGAGAACACAGATGCGAACGAGAGGCCCAGGTACCCTCATCGTGGGCACGCTCACATaGGGTTTGAATCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: QRSSMRTQMRTRGPGTLIVGTLT*GLNPSA
Trigger: TGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCAC...GATGAGGGTACCTGGGCCTCTCGTTCGCATCTGTGTTCTCATGGATGAGCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGCAAGGTAATGCTGCTTaGAGGCTTCTCTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVQGNAA*RLLSKT
Trigger: AGTCTTGGAGAGAAGCCTTCAAGCAGCATTACCTTG...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGAGCACAGGCGTGTGGTTaGGCAGTGCTGATCAATGCT +
Preference number: 4 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGAQACG*AVLINA
Trigger: AGCATTGATCAGCACTGCTCAACCACACGCCTGTGC...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp ATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTGCGAAGAAAGATGCCTaGCGCTCGGCAGCGGTAAAT +
Preference number: 4 (lower is better)
Translates to: IGATKQVQRTVPGIEEASAKKDA*RSAAVN
Trigger: ATTTACCGCTGCCGAGCGTCAGGCATCTTTCTTCGC...ACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp AGGCACAGGCCTTTTTCTGACTGGAGTCGACAGCTGGCAGGGTTGCAGGGAGCCTCTGGTTACACAGTATaGGTGGGTTGGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: RHRPFSDWSRQLAGLQGASGYTV*VGWTFS
Trigger: GGAAAAAGTCCAACCCACTCATACTGTGTAACCAGA...GGCTCCCTGCAACCCTGCCAGCTGTCGACTCCAGTCAGAAAAAGGCCTGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCTCTGGTTACACAGTATaGGTGGGTTGGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: EWEGIVQVELALHPALFLSGYTV*VGWTFS
Trigger: GGAAAAAGTCCAACCCACTCATACTGTGTAACCAGA...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GCCTCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCTCCACACCTCCCCACTaGTTCTCACGGATGACATTT +
Preference number: 4 (lower is better)
Translates to: ASVVIDTIAPELHFALGLSTPPH*FSRMTF
Trigger: AAATGTCATCCGTGAGAATCAGTGGGGAGGTGTGGA...GAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GCTTACTGTGGCTCTAGAGGACTCGTTCAGGCAACCCCAAGCACTCACTTTTTCCGTCCCCATCCTCGCTaGAGTTCTCTTGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: AYCGSRGLVQATPSTHFFRPHPR*SSLEPC
Trigger: ACAGGGCTCAAGAGAACTTCAGCGAGGATGGGGACG...GAAAAAGTGAGTGCTTGGGGTTGCCTGAACGAGTCCTCTAGAGCCACAGTAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACTTGTTTGAGATCTGCTaGAAGATGGTCTTACTGGTT +
Preference number: 4 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHLFEIC*KMVLLV
Trigger: AACCAGTAAGACCATCTTTCAGCAGATCTCAAACAA...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACACTTGTTGTTTTGCATaGTGCATTCTCGGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHTCCFA*CILGCL
Trigger: CAAACAACCGAGAATGCATCATGCAAAACAACAAGT...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GCTTACTGTGGCTCTAGAGGACTCGTTCAGGCAACCCCAAGCACTCACTTTTTCGCACAGGCCTTTTTCTaGCTGGAGTCGACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AYCGSRGLVQATPSTHFFAQAFF*LESTAG
Trigger: GCCAGCTGTCGACTCCAGTCAGAAAAAGGCCTGTGC...GAAAAAGTGAGTGCTTGGGGTTGCCTGAACGAGTCCTCTAGAGCCACAGTAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GCCTCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCGACCTGGTGACTGACTaGCTGGACATCTTCGGATTA +
Preference number: 4 (lower is better)
Translates to: ASVVIDTIAPELHFALGLDLVTD*LDIFGL
Trigger: TAATCCGAAGATGTCCAGTCAGTCAGTCACCAGGTC...GAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGATCAACAAGACCTGGTaGCTGACTGACTGGACATCT +
Preference number: 4 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVINKTW*LTDWTS
Trigger: AGATGTCCAGTCAGTCAGTCACCAGGTCTTGTTGAT...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCTTTATAGACTTCGAGTaGCTGGAAACCCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: EWEGIVQVELALHPALFLFIDFE*LETHQL
Trigger: AAGCTGGTGGGTTTCCAGTCACTCGAAGTCTATAAA...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp TGGGACTTGGACATATTCACAGTACGGTTCAGTAAAGTCCTCTGGGAGCTGGCCGAGGAGGAAAGAGCATaGGCCAAGGCACAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WDLDIFTVRFSKVLWELAEEERA*AKAQSG
Trigger: CCCACTCTGTGCCTTGGCTCATGCTCTTTCCTCCTC...GGCCAGCTCCCAGAGGACTTTACTGAACCGTACTGTGAATATGTCCAAGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp AGGCACAGGCCTTTTTCTGACTGGAGTCGACAGCTGGCAGGGTTGCAGGGAGCCGGTCCATGTCTTGGATaGAAGGTAATGCTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: RHRPFSDWSRQLAGLQGAGPCLG*KVMLLE
Trigger: TTCAAGCAGCATTACCTTGCATCCAAGACATGGACC...GGCTCCCTGCAACCCTGCCAGCTGTCGACTCCAGTCAGAAAAAGGCCTGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CCAACAGAGCAGCACCTAGGGCCAATAGAACCAGCCACGCAGCCAAGTGCACGAGCCCGTTCTCAAAGTTaGAGTTGTCAAACTGGACGT +
Preference number: 4 (lower is better)
Translates to: PTEQHLGPIEPATQPSARARSQS*SCQTGR
Trigger: ACGTCCAGTTTGACAACTGCAACTTTGAGAACGGGC...TCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTGCTGCTCTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGCCATGGACCTGGATGTaGCCGTTCTCAAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: DKAESAQYPEREQRKATEPWTWM*PFSKLQ
Trigger: CTGCAACTTTGAGAACGGGCACATCCAGGTCCATGG...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCACATTGGTGATGACATaGAGTGCCTCGCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSTLVMT*SASLLW
Trigger: CCAGAGCAGCGAGGCACTGCATGTCATCACCAATGT...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTAGTCCAAGGCATTCTTaGTCCATGTCTTGGATGCAA +
Preference number: 4 (lower is better)
Translates to: QAGEGPTGKAEWEGIVQVSPRHS*SMSWMQ
Trigger: TTGCATCCAAGACATGGACCAAGAATGCCTTGGACT...AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp TGGGACTTGGACATATTCACAGTACGGTTCAGTAAAGTCCTCTGGGAGCTGGCCGTCAAACTCACGGCCTaGCCCAACACTCAGGGTACG +
Preference number: 4 (lower is better)
Translates to: WDLDIFTVRFSKVLWELAVKLTA*PNTQGT
Trigger: CGTACCCTGAGTGTTGGGCCAGGCCGTGAGTTTGAC...GGCCAGCTCCCAGAGGACTTTACTGAACCGTACTGTGAATATGTCCAAGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGGTACAGAACTTCACTTaGCAAGTACCCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMVQNFT*QVPGPW
Trigger: CCATGGCCCGGGTACTTGCCAAGTGAAGTTCTGTAC...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTGGATCAGTCTGTACATCAGCTaGTCCTCATCTTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: VGWLLWATVMPLSPFAWISLYIS*SSSSSS
Trigger: TGAGGATGAAGATGAGGACCAGCTGATGTACAGACT...GATCCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCAGTCTGTACATCAGCTaGTCCTCATCTTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: EWEGIVQVELALHPALFLSLYIS*SSSSSS
Trigger: TGAGGATGAAGATGAGGACCAGCTGATGTACAGACT...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCCCAGAGCGAAGGCCATaGTGGATCTGGTTACACAGT +
Preference number: 4 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSPERRP*WIWLHS
Trigger: ACTGTGTAACCAGATCCACCATGGCCTTCGCTCTGG...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCTTAGAAAGATTAACCTaGCAGGATGCATGGGACAAC +
Preference number: 4 (lower is better)
Translates to: HSGGLAALGHSNASVPIRLERLT*QDAWDN
Trigger: GTTGTCCCATGCATCCTGCCAGGTTAATCTTTCTAA...GCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGGGGTCTGACCTCACCTaGCTTTGGGACTTGGACATA +
Preference number: 4 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMGSDLT*LWDLDI
Trigger: TATGTCCAAGTCCCAAAGCCAGGTGAGGTCAGACCC...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATTGTTCAGGTTGAGCTaGCCCTGCATCCAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGLFRLS*PCIQPS
Trigger: AGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAA...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CAA 72 bp ACAGTAATGCCTCTGTCCCCATTCGCGTGGATCACATaGGTGATGACATGCAGTGCCTCGCTGCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: TVMPLSPFAWIT*VMTCSASLLWT
Trigger: TGTCCAGAGCAGCGAGGCACTGCATGTCATCACCAATGTGATCCACGCGAATGGGGACAGAGGCATTACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GCTTACTGTGGCTCTAGAGGACTCGTTCAGGCAACCCCAAGCACTCACTTTTTCGCACAGGCGTGTGGTTaGGCAGTGCTGATCAATGCT +
Preference number: 4 (lower is better)
Translates to: AYCGSRGLVQATPSTHFFAQACG*AVLINA
Trigger: AGCATTGATCAGCACTGCTCAACCACACGCCTGTGC...GAAAAAGTGAGTGCTTGGGGTTGCCTGAACGAGTCCTCTAGAGCCACAGTAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp AGTGTTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGATGTTGTCTTATACATaGTGGGTGAGAACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SVLEVPCFGGPGPICSRGMLSYT*WVRTRL
Trigger: CAGCCTGGTTCTCACCCATCATGTATAAGACAACAT...CCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp CAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTTTGTCAAACTGGACGTaGCCTGATGTTGTCTTATAC +
Preference number: 4 (lower is better)
Translates to: QAGEGPTGKAEWEGIVQVLSNWT*PDVVLY
Trigger: GTATAAGACAACATCAGGTCACGTCCAGTTTGACAA...AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGTCCACACCTCCCCACTaGTTCTCACGGATGACATTT +
Preference number: 4 (lower is better)
Translates to: DKAESAQYPEREQRKATESTPPH*FSRMTF
Trigger: AAATGTCATCCGTGAGAATCAGTGGGGAGGTGTGGA...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAGAACCCAGTGCTCCTGGCTCCCCCTGAGGCTCCATTGTaGTTAATACTGTTAGACTCA +
Preference number: 4 (lower is better)
Translates to: ASTLVPSVLRENPVLLAPPEAPL*LILLDS
Trigger: TGAGTCTAACAGTATTAATCACAATGGAGCCTCAGG...GGGAGCCAGGAGCACTGGGTTCTCCCTGAGAACACTGGGCACAAGAGTACTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp AGTGTTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGGCATTCTCGGTTGTTTaGGATCTGCTGAAAGATGGT +
Preference number: 4 (lower is better)
Translates to: SVLEVPCFGGPGPICSRGAFSVV*DLLKDG
Trigger: ACCATCTTTCAGCAGATCTCAAACAACCGAGAATGC...CCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp AGGGGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGTCTATCCCTTCTCCCTaGAAAACATTGCCCACTTTC +
Preference number: 4 (lower is better)
Translates to: RGGWCGHAHMGFESFCIWSIPSP*KTLPTF
Trigger: GAAAGTGGGCAATGTTTTTCAGGGAGAAGGGATAGA...CCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GACAGTGCCAGGGATAGAAGAGGCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAAAAAGCTTCAGCATTTaGGCTTCCCCCGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: DSARDRRGQYSCAQCSQGKSFSI*ASPALH
Trigger: GTGAAGAGCGGGGGAAGCTCAAATGCTGAAGCTTTT...TCCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTTCTATCCCTGGCACTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCACTCAGAGAAAATCCTaGCCAAAAGCTTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: ERPSGRGLFRLSWPCIQPTQRKS*PKASAF
Trigger: AAATGCTGAAGCTTTTGGTCAGGATTTTCTCTGAGT...GGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTCGGCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGCGCTCACATGGGGTTTaGATCCTTCTGCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: DKAESAQYPEREQRKATERSHGV*ILLHLG
Trigger: TCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCG...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp TCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCAACAGTAGGCTAAGATCATaGGCCACAGCTCCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: SVVIDTIAPELHFALGLNSRLRS*ATAPRG
Trigger: TCCCCTTGGAGCTGTGGCGCATGATCTTAGCCTACT...GTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGGGTACAGGATGTAAATaGCAGCCTCCTTATTGGAAA +
Preference number: 4 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGGTGCK*QPPYWK
Trigger: TTTCCAATAAGGAGGCTGGCATTTACATCCTGTACC...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp ATGGGGGAGGCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATTGTCATAGATACCATTaGCCCGGAGCTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: MGEAGRHHPHTTALVSVDCHRYH*PGAPLC
Trigger: GCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACA...ATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGCCTCCCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGTGTCATAGATACCATTaGCCCGGAGCTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: DKAESAQYPEREQRKATECHRYH*PGAPLC
Trigger: GCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACA...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CAACCAGAATGTGAAAGCGAAAGCACGGACCAATCAGAACACAGCCCAAGCAGAGGCTCCACATCTGGCTaGTTGGGCCAATTGGGATGG +
Preference number: 4 (lower is better)
Translates to: QPECESESTDQSEHSPSRGSTSG*LGQLGW
Trigger: CCATCCCAATTGGCCCAACCAGCCAGATGTGGAGCC...TCTGCTTGGGCTGTGTTCTGATTGGTCCGTGCTTTCGCTTTCACATTCTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGTCTTGGTCCATGTCTTaGATGCAAGGTAATGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGWCGHAHMGFESFCIWESWSMS*MQGNAA
Trigger: AGCAGCATTACCTTGCATCCAAGACATGGACCAAGA...CTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CAACCAGAATGTGAAAGCGAAAGCACGGACCAATCAGAACACAGCCCAAGCAGAAATGTCACAGGTCTTTaGGCTCCAGGCCTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: QPECESESTDQSEHSPSRNVTGL*APGLVP
Trigger: CGGGACCAGGCCTGGAGCCCAAAGACCTGTGACATT...TCTGCTTGGGCTGTGTTCTGATTGGTCCGTGCTTTCGCTTTCACATTCTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CAGCTGCAGCCCGCTGCCCCGGTTGCCAATGATATCGTTTTCAATGACGATGGTCTGTCCCCATTCGCGTaGATCACATTGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: QLQPAAPVANDIVFNDDGLSPFA*ITLVMT
Trigger: TGTCATCACCAATGTGATCCACGCGAATGGGGACAG...ACCATCGTCATTGAAAACGATATCATTGGCAACCGGGGCAGCGGGCTGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCGTCCTCCTTCTCCTTACTGGTTTTGCCCTaGAAGATGATGTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: DSTRAMVMGRRSGSSSFSLLVLP*KMMFSC
Trigger: GCAGGAAAACATCATCTTCCAGGGCAAAACCAGTAA...GGAGAAGGAGGACGACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGTTACTGGTTTTGCCCTaGAAGATGATGTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGLLVLP*KMMFSC
Trigger: GCAGGAAAACATCATCTTCCAGGGCAAAACCAGTAA...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp TTGTTGGCCACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCAGATCTGCTGAAAGATaGTCTTACTGGTTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LLATRVGWLLWATVMPLSRSAER*SYWFCP
Trigger: AGGGCAAAACCAGTAAGACCATCTTTCAGCAGATCT...GGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp ATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTACAGGAAAGGCCGAGTaGGAGGGGATTGTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: IGATKQVQRTVPGIEEASTGKAE*EGIVQV
Trigger: AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGT...ACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CAA 72 bp CAGGCAGTGGGGTCTGACCTCACCTGGCTTTGGGACTaGGACATATTCACAGTACGGTTCAGTAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: QAVGSDLTWLWD*DIFTVRFSKVL
Trigger: GAGGACTTTACTGAACCGTACTGTGAATATGTCCAAGTCCCAAAGCCAGGTGAGGTCAGACCCCACTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp TTGTTGGCCACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCAAACTGGACGTGACCTaGTGTTGTCTTATACATGAT +
Preference number: 4 (lower is better)
Translates to: LLATRVGWLLWATVMPLSKLDVT*CCLIHD
Trigger: ATCATGTATAAGACAACATCAGGTCACGTCCAGTTT...GGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGTTGTCAAACTGGACGTaGCCTGATGTTGTCTTATAC +
Preference number: 4 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVLSNWT*PDVVLY
Trigger: GTATAAGACAACATCAGGTCACGTCCAGTTTGACAA...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCAGATATGGGTGTTTTTaGAGGTACAGAACTTCACTT +
Preference number: 4 (lower is better)
Translates to: ERPSGRGLFRLSWPCIQPRYGCF*RYRTSL
Trigger: AAGTGAAGTTCTGTACCTTCAAAAACACCCATATCT...GGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTCGGCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GCCTCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCGCATTCTCGGTTGTTTaGGATCTGCTGAAAGATGGT +
Preference number: 4 (lower is better)
Translates to: ASVVIDTIAPELHFALGLAFSVV*DLLKDG
Trigger: ACCATCTTTCAGCAGATCTCAAACAACCGAGAATGC...GAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp ATTAATACTGTTAGACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCAAGGACAGACAGGTTTaGGGAAGATGGGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: INTVRLNKSYGDGPAQWVKDRQV*GRWVAA
Trigger: TGCCGCCACCCATCTTCCTCAAACCTGTCTGTCCTT...GACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTCTAACAGTATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GCTTACTGTGGCTCTAGAGGACTCGTTCAGGCAACCCCAAGCACTCACTTTTTCACAAGACCTGGTGACTaGCTGACTGGACATCTTCGG +
Preference number: 4 (lower is better)
Translates to: AYCGSRGLVQATPSTHFFTRPGD*LTGHLR
Trigger: CCGAAGATGTCCAGTCAGTCAGTCACCAGGTCTTGT...GAAAAAGTGAGTGCTTGGGGTTGCCTGAACGAGTCCTCTAGAGCCACAGTAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCCAGAGTTGTTTTCACTaGCCACAAATTCACAGTTTT +
Preference number: 4 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGQSCFH*PQIHSF
Trigger: AAAACTGTGAATTTGTGGGCAGTGAAAACAACTCTG...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATGTGGTAAATGTTGTTaGCGGCAATCAAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGCGKCC*RQSSHR
Trigger: GCGGTGGCTTGATTGCCGGCAACAACATTTACCACA...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CTTGTTAGCGTAGATGGTATTTCCTTCTATGAGGCCTTTGCCTTCGTCTCCCACTTCGGTCATACAGGCTaGCCATGGCCAAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LVSVDGISFYEAFAFVSHFGHTG*PWPRHC
Trigger: GCAGTGCCTTGGCCATGGCCAGCCTGTATGACCGAA...GTGGGAGACGAAGGCAAAGGCCTCATAGAAGGAAATACCATCTACGCTAACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp ATTAATACTGTTAGACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCAGTGCTGATCAATGCTaGCCAGCAGGGCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: INTVRLNKSYGDGPAQWVSADQC*PAGPLH
Trigger: GTGAAGTGGCCCTGCTGGCCAGCATTGATCAGCACT...GACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTCTAACAGTATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CTTGTTAGCGTAGATGGTATTTCCTTCTATGAGGCCTTTGCCTTCGTCTCCCACGGGCTGGTAGGGCTCTaGCTGCCCTCGATAACAATG +
Preference number: 4 (lower is better)
Translates to: LVSVDGISFYEAFAFVSHGLVGL*LPSITM
Trigger: CATTGTTATCGAGGGCAGCCAGAGCCCTACCAGCCC...GTGGGAGACGAAGGCAAAGGCCTCATAGAAGGAAATACCATCTACGCTAACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp TGGGACTTGGACATATTCACAGTACGGTTCAGTAAAGTCCTCTGGGAGCTGGCCTGTTTCCTTCCATCTTaGCTCTGCCGTGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: WDLDIFTVRFSKVLWELACFLPS*LCRGSR
Trigger: TCTGCTCCCACGGCAGAGCCAAGATGGAAGGAAACA...GGCCAGCTCCCAGAGGACTTTACTGAACCGTACTGTGAATATGTCCAAGTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CCAACAGAGCAGCACCTAGGGCCAATAGAACCAGCCACGCAGCCAAGTGCACGAGTTACACAGTATGAGTaGGTTGGACTTTTTCCGGAT +
Preference number: 4 (lower is better)
Translates to: PTEQHLGPIEPATQPSARVTQYE*VGLFPD
Trigger: ATCCGGAAAAAGTCCAACCCACTCATACTGTGTAAC...TCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTGCTGCTCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp ATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTAGGCCATGGTGGATCTaGTTACACAGTATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: IGATKQVQRTVPGIEEASRPWWI*LHSMSG
Trigger: CCCACTCATACTGTGTAACCAGATCCACCATGGCCT...ACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp AAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGGTTGTTTGAGATCTGCGGACAACCTCCAGAGTaGAGCAGGGGGTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: KTRNLLFCMMHSRLFEICGQPPE*SRGWPR
Trigger: CCGTGGCCACCCCCTGCTCCACTCTGGAGGTTGTCC...GCAGATCTCAAACAACCGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGGACCTCACCTGGCTTTaGGACTTGGACATATTCACA +
Preference number: 4 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMDLTWL*DLDIFT
Trigger: TGTGAATATGTCCAAGTCCCAAAGCCAGGTGAGGTC...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATACAGCGACTCACATTaGGGCCACCAAACAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGYSDSH*GHQTSA
Trigger: TGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTA...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp ATGGGGGAGGCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATATGTTGTCTTATACATaGTGGGTGAGAACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MGEAGRHHPHTTALVSVDMLSYT*WVRTRL
Trigger: CAGCCTGGTTCTCACCCATCATGTATAAGACAACAT...ATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGCCTCCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp AGTGTTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAAACTGGACGTGACCTaGTGTTGTCTTATACATGAT +
Preference number: 4 (lower is better)
Translates to: SVLEVPCFGGPGPICSRGKLDVT*CCLIHD
Trigger: ATCATGTATAAGACAACATCAGGTCACGTCCAGTTT...CCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCGTCCTCCTTCTCCAGATATGGGTGTTTTTaGAGGTACAGAACTTCACTT +
Preference number: 4 (lower is better)
Translates to: DSTRAMVMGRRSGSSSFSRYGCF*RYRTSL
Trigger: AAGTGAAGTTCTGTACCTTCAAAAACACCCATATCT...GGAGAAGGAGGACGACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTACTTTTGATTGTTCCGGATaGTGCCTTTCCCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: GATKQVQRTVPGIEEASTFDCSG*CLSHCQ
Trigger: TTGGCAATGGGAAAGGCATCATCCGGAACAATCAAA...AGTACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GCCTCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCCCTGAGGCTCCATTGTaGTTAATACTGTTAGACTCA +
Preference number: 4 (lower is better)
Translates to: ASVVIDTIAPELHFALGLPEAPL*LILLDS
Trigger: TGAGTCTAACAGTATTAATCACAATGGAGCCTCAGG...GAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GACAGTGCCAGGGATAGAAGAGGCCAGTACTCTTGTGCCCAGTGTTCTCAGGGACTGGACATAGAGTCCTaGGGCTCCATTGTGATTAAT +
Preference number: 4 (lower is better)
Translates to: DSARDRRGQYSCAQCSQGLDIES*GSIVIN
Trigger: ATTAATCACAATGGAGCCTCAGGACTCTATGTCCAG...TCCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTTCTATCCCTGGCACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp CTCGCTGGAGCCATCCTTCTGGCTAAATACTGCCACTCCATACAGGCCATTGTATGCAGAGCTGAGATCTaGAACCACATACCCCTGACT +
Preference number: 4 (lower is better)
Translates to: LAGAILLAKYCHSIQAIVCRAEI*NHIPLT
Trigger: AGTCAGGGGTATGTGGTTTCAGATCTCAGCTCTGCA...TACAATGGCCTGTATGGAGTGGCAGTATTTAGCCAGAAGGATGGCTCCAGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp TCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCAACAGTAACCTGCAGAGCTaGGATCTGAAACCACATACC +
Preference number: 4 (lower is better)
Translates to: SVVIDTIAPELHFALGLNSNLQS*DLKPHT
Trigger: GGTATGTGGTTTCAGATCTCAGCTCTGCAGGTTACT...GTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGTATCAGACTTTTTCTTaGAGACCAGGAACTTGTTGT +
Preference number: 4 (lower is better)
Translates to: AGEGPTGKAEWEGIVQVEYQTFS*RPGTCC
Trigger: ACAACAAGTTCCTGGTCTTCAAGAAAAAGTCTGATA...CTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGGGTCCATGTCTTGGATaGAAGGTAATGCTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMGPCLG*KVMLLE
Trigger: TTCAAGCAGCATTACCTTGCATCCAAGACATGGACC...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp CTTGTTAGCGTAGATGGTATTTCCTTCTATGAGGCCTTTGCCTTCGTCTCCCACTCACCCAACTTCCCCTaGCCTACAATCTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: LVSVDGISFYEAFAFVSHSPNFP*PTISTG
Trigger: GCCTGTGGAGATTGTAGGGCAGGGGAAGTTGGGTGA...GTGGGAGACGAAGGCAAAGGCCTCATAGAAGGAAATACCATCTACGCTAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CAACCAGAATGTGAAAGCGAAAGCACGGACCAATCAGAACACAGCCCAAGCAGACCATGGACCTGGATGTaGCCGTTCTCAAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: QPECESESTDQSEHSPSRPWTWM*PFSKLQ
Trigger: CTGCAACTTTGAGAACGGGCACATCCAGGTCCATGG...TCTGCTTGGGCTGTGTTCTGATTGGTCCGTGCTTTCGCTTTCACATTCTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp GTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTGGATCCAGAGTTGTTTTCACTaGCCACAAATTCACAGTTTT +
Preference number: 4 (lower is better)
Translates to: VGWLLWATVMPLSPFAWIQSCFH*PQIHSF
Trigger: AAAACTGTGAATTTGTGGGCAGTGAAAACAACTCTG...GATCCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CAACCAGAATGTGAAAGCGAAAGCACGGACCAATCAGAACACAGCCCAAGCAGAGGTGATGACATGCAGTaGCTCGCTGCTCTGGACATA +
Preference number: 4 (lower is better)
Translates to: QPECESESTDQSEHSPSRGDDMQ*LAALDI
Trigger: TATGTCCAGAGCAGCGAGGCACTGCATGTCATCACC...TCTGCTTGGGCTGTGTTCTGATTGGTCCGTGCTTTCGCTTTCACATTCTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CAACCAGAATGTGAAAGCGAAAGCACGGACCAATCAGAACACAGCCCAAGCAGAAAGATGATGTTTTCCTaGACCAGGGCCTTGGCACGG +
Preference number: 4 (lower is better)
Translates to: QPECESESTDQSEHSPSRKMMFS*TRALAR
Trigger: CCGTGCCAAGGCCCTGGTGCAGGAAAACATCATCTT...TCTGCTTGGGCTGTGTTCTGATTGGTCCGTGCTTTCGCTTTCACATTCTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CAGCTGCAGCCCGCTGCCCCGGTTGCCAATGATATCGTTTTCAATGACGATGGTTCTTGGTCCATGTCTTaGATGCAAGGTAATGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLQPAAPVANDIVFNDDGSWSMS*MQGNAA
Trigger: AGCAGCATTACCTTGCATCCAAGACATGGACCAAGA...ACCATCGTCATTGAAAACGATATCATTGGCAACCGGGGCAGCGGGCTGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp TCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCAACGTTCTTATCTGCAGATaGGTGACCCTCAACAGTCAC +
Preference number: 4 (lower is better)
Translates to: SVVIDTIAPELHFALGLNVLICR*VTLNSH
Trigger: GTGACTGTTGAGGGTCACCCATCTGCAGATAAGAAC...GTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GCCTCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCGTTACACAGTATGAGTaGGTTGGACTTTTTCCGGAT +
Preference number: 4 (lower is better)
Translates to: ASVVIDTIAPELHFALGLVTQYE*VGLFPD
Trigger: ATCCGGAAAAAGTCCAACCCACTCATACTGTGTAAC...GAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GCTTACTGTGGCTCTAGAGGACTCGTTCAGGCAACCCCAAGCACTCACTTTTTCCTGGAGCCATCCTTCTaGCTAAATACTGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: AYCGSRGLVQATPSTHFFLEPSF*LNTATP
Trigger: TGGAGTGGCAGTATTTAGCCAGAAGGATGGCTCCAG...GAAAAAGTGAGTGCTTGGGGTTGCCTGAACGAGTCCTCTAGAGCCACAGTAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp TTTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGCCTGGCTTTGGGACTTaGACATATTCACAGTACGGT +
Preference number: 4 (lower is better)
Translates to: FTATHIGATKQVQRTVPGPGFGT*TYSQYG
Trigger: ACCGTACTGTGAATATGTCCAAGTCCCAAAGCCAGG...CCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
3UTR CAA 72 bp GAGACAGCTCTAGCAAAGGGGAAAATTCTGGAGCAGTaGTCTCTCTCCACCTCACTAGAATCACTTCCCGCC +
Preference number: 4 (lower is better)
Translates to: ETALAKGKILEQ*SLSTSLESLPA
Trigger: GGCGGGAAGTGATTCTAGTGAGGTGGAGAGAGACAACTGCTCCAGAATTTTCCCCTTTGCTAGAGCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp TCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCAACTTTGATTGTTCCGGATaGTGCCTTTCCCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: SVVIDTIAPELHFALGLNFDCSG*CLSHCQ
Trigger: TTGGCAATGGGAAAGGCATCATCCGGAACAATCAAA...GTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCGCAATTGTGATACATTaGGGCAGAGTGACTAAAGGA +
Preference number: 4 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSAIVIH*GRVTKG
Trigger: TCCTTTAGTCACTCTGCCTCAATGTATCACAATTGC...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp ATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTAAGATGATTTCACCTTaGTCTTCGTACACACCTGGG +
Preference number: 4 (lower is better)
Translates to: IGATKQVQRTVPGIEEASKMISP*SSYTPG
Trigger: CCCAGGTGTGTACGAAGAGCAAGGTGAAATCATCTT...ACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp GCTTACTGTGGCTCTAGAGGACTCGTTCAGGCAACCCCAAGCACTCACTTTTTCGCCCGTTCTCAAAGTTaGAGTTGTCAAACTGGACGT +
Preference number: 4 (lower is better)
Translates to: AYCGSRGLVQATPSTHFFARSQS*SCQTGR
Trigger: ACGTCCAGTTTGACAACTGCAACTTTGAGAACGGGC...GAAAAAGTGAGTGCTTGGGGTTGCCTGAACGAGTCCTCTAGAGCCACAGTAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp ATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTCTTCTGGCTAAATACTaGCACTCCATACAGGCCATT +
Preference number: 4 (lower is better)
Translates to: IGATKQVQRTVPGIEEASLLAKY*HSIQAI
Trigger: AATGGCCTGTATGGAGTGGCAGTATTTAGCCAGAAG...ACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CAGCTGCAGCCCGCTGCCCCGGTTGCCAATGATATCGTTTTCAATGACGATGGTATAGAGAAAAGCAGATaGAAGACTCCAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QLQPAAPVANDIVFNDDGIEKSR*KTPSPR
Trigger: CCTTGGACTTGGAGTCTTCCATCTGCTTTTCTCTAT...ACCATCGTCATTGAAAACGATATCATTGGCAACCGGGGCAGCGGGCTGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGATAGAGAAAAGCAGATaGAAGACTCCAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMIEKSR*KTPSPR
Trigger: CCTTGGACTTGGAGTCTTCCATCTGCTTTTCTCTAT...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp AAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGGTTGTTTGAGATCTGCCCCCAATACAGGGCGTaGGCCCTGCACTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: KTRNLLFCMMHSRLFEICPQYRA*ALHLVG
Trigger: TCCTACCAAGTGCAGGGCCCACGCCCTGTATTGGGG...GCAGATCTCAAACAACCGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CACTCACTTTTTCTTGAAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGAAGCTTGTTCCCTCCTaGGGAGTCCTCAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: HSLFLEDQELVVLHDAFSKLVPS*GVLSPG
Trigger: GCCCGGGCTGAGGACTCCCCAGGAGGGAACAAGCTT...CGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTTCAAGAAAAAGTGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp AAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGGTTGTTTGAGATCTGCGTGGTTGAGCAGTGCTaGTCAATGCTGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KTRNLLFCMMHSRLFEICVVEQC*SMLASR
Trigger: CCTGCTGGCCAGCATTGATCAGCACTGCTCAACCAC...GCAGATCTCAAACAACCGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp CTCGCTGGAGCCATCCTTCTGGCTAAATACTGCCACTCCATACAGGCCATTGTACTGGACATAGAGTCCTaGGGCTCCATTGTGATTAAT +
Preference number: 4 (lower is better)
Translates to: LAGAILLAKYCHSIQAIVLDIES*GSIVIN
Trigger: ATTAATCACAATGGAGCCTCAGGACTCTATGTCCAG...TACAATGGCCTGTATGGAGTGGCAGTATTTAGCCAGAAGGATGGCTCCAGCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp TCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCAACGAAACCACATACCCCTaGCTCTTAAAAAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SVVIDTIAPELHFALGLNETTYP*LLKSLF
Trigger: GAACAAGCTTTTTAAGAGTCAGGGGTATGTGGTTTC...GTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GCTTACTGTGGCTCTAGAGGACTCGTTCAGGCAACCCCAAGCACTCACTTTTTCTTTACAACCAGAATGTaGAAGCGAAAGCACGGACCA +
Preference number: 4 (lower is better)
Translates to: AYCGSRGLVQATPSTHFFFTTRM*KRKHGP
Trigger: TGGTCCGTGCTTTCGCTTTCACATTCTGGTTGTAAA...GAAAAAGTGAGTGCTTGGGGTTGCCTGAACGAGTCCTCTAGAGCCACAGTAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp GCTTACTGTGGCTCTAGAGGACTCGTTCAGGCAACCCCAAGCACTCACTTTTTCAAGATGATTTCACCTTaGTCTTCGTACACACCTGGG +
Preference number: 4 (lower is better)
Translates to: AYCGSRGLVQATPSTHFFKMISP*SSYTPG
Trigger: CCCAGGTGTGTACGAAGAGCAAGGTGAAATCATCTT...GAAAAAGTGAGTGCTTGGGGTTGCCTGAACGAGTCCTCTAGAGCCACAGTAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp ATTAATACTGTTAGACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCAGATGTGAAGTAAGTTaGCCAAGGTCACACAGCCAG +
Preference number: 4 (lower is better)
Translates to: INTVRLNKSYGDGPAQWVRCEVS*PRSHSQ
Trigger: CTGGCTGTGTGACCTTGGGCAACTTACTTCACATCT...GACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTCTAACAGTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCTTGTGCAGGAAGATATaGGTGTTTTTGAAGGTACAG +
Preference number: 4 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSLCRKI*VFLKVQ
Trigger: CTGTACCTTCAAAAACACCCATATCTTCCTGCACAA...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGTTGTGCAGGAAGATATaGGTGTTTTTGAAGGTACAG +
Preference number: 4 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMLCRKI*VFLKVQ
Trigger: CTGTACCTTCAAAAACACCCATATCTTCCTGCACAA...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp AAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGGTTGTTTGAGATCTGCATCTTGGCTCTGCCGTaGGAGCAGACGAAGACGCCT +
Preference number: 4 (lower is better)
Translates to: KTRNLLFCMMHSRLFEICILALP*EQTKTP
Trigger: AGGCGTCTTCGTCTGCTCCCACGGCAGAGCCAAGAT...GCAGATCTCAAACAACCGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CTTGTTAGCGTAGATGGTATTTCCTTCTATGAGGCCTTTGCCTTCGTCTCCCACGAGCGAAGGCCATGGTaGATCTGGTTACACAGTATG +
Preference number: 4 (lower is better)
Translates to: LVSVDGISFYEAFAFVSHERRPW*IWLHSM
Trigger: CATACTGTGTAACCAGATCCACCATGGCCTTCGCTC...GTGGGAGACGAAGGCAAAGGCCTCATAGAAGGAAATACCATCTACGCTAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp ATGGGGGAGGCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATTGCCAGCCTCCTTATTaGAAAAGATTTGATTGTTCC +
Preference number: 4 (lower is better)
Translates to: MGEAGRHHPHTTALVSVDCQPPY*KRFDCS
Trigger: GGAACAATCAAATCTTTTCCAATAAGGAGGCTGGCA...ATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGCCTCCCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGTGCCAGCCTCCTTATTaGAAAAGATTTGATTGTTCC +
Preference number: 4 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMCQPPY*KRFDCS
Trigger: GGAACAATCAAATCTTTTCCAATAAGGAGGCTGGCA...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp AAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGGTTGTTTGAGATCTGCAGGAGATGCTGTTGTTaGCCACTCGGGTGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: KTRNLLFCMMHSRLFEICRRCCC*PLGWVG
Trigger: GCCAACCCACCCGAGTGGCCAACAACAGCATCTCCT...GCAGATCTCAAACAACCGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp AAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGGTTGTTTGAGATCTGCGGGTGCTGTCGAGACTaGGGATCAGTTCATACCAGG +
Preference number: 4 (lower is better)
Translates to: KTRNLLFCMMHSRLFEICGCCRD*GSVHTR
Trigger: CCTGGTATGAACTGATCCTCAGTCTCGACAGCACCC...GCAGATCTCAAACAACCGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp GAAACCCACCAGCTTCTATCCCTTCTCCCTGAAAAACATTGCCCACTTTCTTCTCTTATACATGATGGGTaGGAACCAGGCTGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: ETHQLLSLLPEKHCPLSSLIHDG*EPGWRE
Trigger: TTCACGCCAGCCTGGTTCTCACCCATCATGTATAAG...AGAAGAAAGTGGGCAATGTTTTTCAGGGAGAAGGGATAGAAGCTGGTGGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGTTATTGGAAAAGATTTaGTTGTTCCGGATGATGCCT +
Preference number: 4 (lower is better)
Translates to: DKAESAQYPEREQRKATELLEKI*LFRMMP
Trigger: AGGCATCATCCGGAACAATCAAATCTTTTCCAATAA...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp CTTGTTAGCGTAGATGGTATTTCCTTCTATGAGGCCTTTGCCTTCGTCTCCCACATGTATACACCGCACTaGGTAAGTCAGGTTCCGGAA +
Preference number: 4 (lower is better)
Translates to: LVSVDGISFYEAFAFVSHMYTPH*VSQVPE
Trigger: TTCCGGAACCTGACTTACGCAGTGCGGTGTATACAT...GTGGGAGACGAAGGCAAAGGCCTCATAGAAGGAAATACCATCTACGCTAACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp ATTAATACTGTTAGACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCCTTCTGGCTAAATACTaGCACTCCATACAGGCCATT +
Preference number: 4 (lower is better)
Translates to: INTVRLNKSYGDGPAQWVLLAKY*HSIQAI
Trigger: AATGGCCTGTATGGAGTGGCAGTATTTAGCCAGAAG...GACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTCTAACAGTATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp GCTTACTGTGGCTCTAGAGGACTCGTTCAGGCAACCCCAAGCACTCACTTTTTCTTGGGGAAGAGGAGGTaGTGGAAAAAGGAACATTTT +
Preference number: 4 (lower is better)
Translates to: AYCGSRGLVQATPSTHFFLGKRR*WKKEHF
Trigger: AAAATGTTCCTTTTTCCAGCACCTCCTCTTCCCCAA...GAAAAAGTGAGTGCTTGGGGTTGCCTGAACGAGTCCTCTAGAGCCACAGTAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GAAACCCACCAGCTTCTATCCCTTCTCCCTGAAAAACATTGCCCACTTTCTTCTGAATCCTTCTGCATTTaGGAGCTCTCTGGGGATGGA +
Preference number: 4 (lower is better)
Translates to: ETHQLLSLLPEKHCPLSSESFCI*ELSGDG
Trigger: TCCATCCCCAGAGAGCTCCCAAATGCAGAAGGATTC...AGAAGAAAGTGGGCAATGTTTTTCAGGGAGAAGGGATAGAAGCTGGTGGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR TCA 90 bp ATTAATACTGTTAGACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCGCACTCACTTTTTCTTaGAGACCAGGAACTTGTTGT +
Preference number: 4 (lower is better)
Translates to: INTVRLNKSYGDGPAQWVALTFS*RPGTCC
Trigger: ACAACAAGTTCCTGGTCTTCAAGAAAAAGTGAGTGC...GACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTCTAACAGTATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp GAAACCCACCAGCTTCTATCCCTTCTCCCTGAAAAACATTGCCCACTTTCTTCTATGTATACACCGCACTaGGTAAGTCAGGTTCCGGAA +
Preference number: 4 (lower is better)
Translates to: ETHQLLSLLPEKHCPLSSMYTPH*VSQVPE
Trigger: TTCCGGAACCTGACTTACGCAGTGCGGTGTATACAT...AGAAGAAAGTGGGCAATGTTTTTCAGGGAGAAGGGATAGAAGCTGGTGGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR GCA 90 bp ATTAATACTGTTAGACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCGTCTACACCAGCCTCTaGATTGTGGTAAATGTTGTT +
Preference number: 4 (lower is better)
Translates to: INTVRLNKSYGDGPAQWVVYTSL*IVVNVV
Trigger: AACAACATTTACCACAATGCAGAGGCTGGTGTAGAC...GACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTCTAACAGTATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CACTCACTTTTTCTTGAAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGTGCCAAGGACGACAATaGCAGAGCGAAGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: HSLFLEDQELVVLHDAFSCQGRQ*QSEGHG
Trigger: ACCATGGCCTTCGCTCTGGCATTGTCGTCCTTGGCA...CGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTTCAAGAAAAAGTGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp ATTAATACTGTTAGACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCGGGAAGAGGAGGTGCTaGAAAAAGGAACATTTTAGA +
Preference number: 4 (lower is better)
Translates to: INTVRLNKSYGDGPAQWVGKRRC*KKEHFR
Trigger: TCTAAAATGTTCCTTTTTCCAGCACCTCCTCTTCCC...GACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTCTAACAGTATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CACTCACTTTTTCTTGAAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGACCTGGCAGGATGCATaGGACAACCTCCAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: HSLFLEDQELVVLHDAFSTWQDA*DNLQSG
Trigger: TCCACTCTGGAGGTTGTCCCATGCATCCTGCCAGGT...CGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTTCAAGAAAAAGTGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR GCA 90 bp CTTGTTAGCGTAGATGGTATTTCCTTCTATGAGGCCTTTGCCTTCGTCTCCCACGGTACAGGATGTAAATaGCAGCCTCCTTATTGGAAA +
Preference number: 4 (lower is better)
Translates to: LVSVDGISFYEAFAFVSHGTGCK*QPPYWK
Trigger: TTTCCAATAAGGAGGCTGGCATTTACATCCTGTACC...GTGGGAGACGAAGGCAAAGGCCTCATAGAAGGAAATACCATCTACGCTAACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CACTCACTTTTTCTTGAAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGGGTTGCACAGGCGTGTaGTTGAGCAGTGCTGATCAA +
Preference number: 4 (lower is better)
Translates to: HSLFLEDQELVVLHDAFSGCTGV*LSSADQ
Trigger: TTGATCAGCACTGCTCAACCACACGCCTGTGCAACC...CGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTTCAAGAAAAAGTGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp CACTCACTTTTTCTTGAAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGCTTATACATGATGGGTaGGAACCAGGCTGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: HSLFLEDQELVVLHDAFSLIHDG*EPGWRE
Trigger: TTCACGCCAGCCTGGTTCTCACCCATCATGTATAAG...CGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTTCAAGAAAAAGTGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR TCA 90 bp CAACCAGAATGTGAAAGCGAAAGCACGGACCAATCAGAACACAGCCCAAGCAGATTATTGGAAAAGATTTaGTTGTTCCGGATGATGCCT +
Preference number: 4 (lower is better)
Translates to: QPECESESTDQSEHSPSRLLEKI*LFRMMP
Trigger: AGGCATCATCCGGAACAATCAAATCTTTTCCAATAA...TCTGCTTGGGCTGTGTTCTGATTGGTCCGTGCTTTCGCTTTCACATTCTGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp CACTCACTTTTTCTTGAAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGAGGCCATGGTGGATCTaGTTACACAGTATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: HSLFLEDQELVVLHDAFSRPWWI*LHSMSG
Trigger: CCCACTCATACTGTGTAACCAGATCCACCATGGCCT...CGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTTCAAGAAAAAGTGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CCA 90 bp GAAACCCACCAGCTTCTATCCCTTCTCCCTGAAAAACATTGCCCACTTTCTTCTAGATCTGCTGAAAGATaGTCTTACTGGTTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: ETHQLLSLLPEKHCPLSSRSAER*SYWFCP
Trigger: AGGGCAAAACCAGTAAGACCATCTTTCAGCAGATCT...AGAAGAAAGTGGGCAATGTTTTTCAGGGAGAAGGGATAGAAGCTGGTGGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CCA 90 bp CACTCACTTTTTCTTGAAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGTGTCAGAACACTGAGTaGATGGTGATGTCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: HSLFLEDQELVVLHDAFSCQNTE*MVMSLK
Trigger: TTTCAGCGACATCACCATCCACTCAGTGTTCTGACA...CGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTTCAAGAAAAAGTGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
3UTR CAA 72 bp GAAGTAAATCTGCTCTTTCCTGAGAAGAGTCTGGGTTaGGTGTGTGTAAAACACAGTTCCTTAGAACTCAGA +
Preference number: 4 (lower is better)
Translates to: EVNLLFPEKSLG*VCVKHSSLELR
Trigger: TCTGAGTTCTAAGGAACTGTGTTTTACACACACCAAACCCAGACTCTTCTCAGGAAAGAGCAGATTTACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GCAGATGAGGTTACTCCTGAGAACGGGGATCCCTCCACGGCGGATGTCCACACCTCCTGCACCAGGGCCTaGGCACGGCCCCGCACGGCG +
Preference number: 5 (lower is better)
Translates to: ADEVTPENGDPSTADVHTSCTRA*ARPRTA
Trigger: CGCCGTGCGGGGCCGTGCCAAGGCCCTGGTGCAGGA...GGTGTGGACATCCGCCGTGGAGGGATCCCCGTTCTCAGGAGTAACCTCATCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGCAGCAGCCGGTAGGATaGCGGCGTGCGGCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGQQPVG*RRAASP
Trigger: GGGGCTGGCCGCACGCCGCAATCCTACCGGCTGCTG...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCCAGCCCTGCACGGAGTaGGCCAGTGCCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGQPCTE*ASAMAS
Trigger: GGAGGCCATGGCACTGGCCAACTCCGTGCAGGGCTG...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS TCA 90 bp CGGTGCAACCCAGACACAGCTGCCGCCAGCGGGTGCTGTCGAGACTaGGGATCAGTTCATACCAGGCCCTGCATACCAGGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: RCNPDTAAASGCCRD*GSVHTRPCIPGCSG
Trigger: GCCGCTGCAGCCTGGTATGCAGGGCCTGGTATGAACTGATCCTCAGTCTCGACAGCACCCGCTGGCGGCAGCTGTGTCTGGGTTGCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000541607.1
CDS GCA 90 bp GGCTGCAGCGGCCCAGGTCGGGAAGGTGCAAGTAGGCTAAGATCATaGGCCACAGCTCCAAGGGGAGGCCACCAGCCTCCATGGTCACCT +
Preference number: 5 (lower is better)
Translates to: GCSGPGREGASRLRS*ATAPRGGHQPPWSP
Trigger: AGGTGACCATGGAGGCTGGTGGCCTCCCCTTGGAGCTGTGGCGCATGATCTTAGCCTACTTGCACCTTCCCGACCTGGGCCGCTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000541607.1
CDS GCA 90 bp CCTCCCTTCCCGTCCCGGAAGAGGCACTTGCGGATGAGGCAGCCCTaGACGGAGTTGGCCAGTGCCATGGCCTCCTTATCCTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PPFPSRKRHLRMRQP*TELASAMASLSFCS
Trigger: GCTGCAGAAGGATAAGGAGGCCATGGCACTGGCCAACTCCGTGCAGGGCTGCCTCATCCGCAAGTGCCTCTTCCGGGACGGGAAGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 90 bp CTCCAAGACTCAGGCTCCACATCTGGCTGGTTGGGCCAATTGGGATaGCGGCACTCGGTGCAACCCAGACACAGCTGCCGCCAGCGGGTG +
Preference number: 5 (lower is better)
Translates to: LQDSGSTSGWLGQLG*RHSVQPRHSCRQRV
Trigger: CACCCGCTGGCGGCAGCTGTGTCTGGGTTGCACCGAGTGCCGCCATCCCAATTGGCCCAACCAGCCAGATGTGGAGCCTGAGTCTTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 90 bp TCCTCACCGCTGGGACTCAGGCCTCCATCGCTGCTGTCCGGGGTCTaGGCCACCCTTTCACCATCACTACCCACCTCTGCCTCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: SSPLGLRPPSLLSGV*ATLSPSLPTSASCE
Trigger: CTCACAGGAGGCAGAGGTGGGTAGTGATGGTGAAAGGGTGGCCCAGACCCCGGACAGCAGCGATGGAGGCCTGAGTCCCAGCGGTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS-3UTR CAA 90 bp AGGCACAGGCCTTTTTCTGACTGGAGTCGACAGCTGGCAGGGTTGCAGGGAGCCCAGCCCTGCACGGAGTaGGCCAGTGCCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RHRPFSDWSRQLAGLQGAQPCTE*ASAMAS
Trigger: GGAGGCCATGGCACTGGCCAACTCCGTGCAGGGCTG...GGCTCCCTGCAACCCTGCCAGCTGTCGACTCCAGTCAGAAAAAGGCCTGTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAGAACCCAGTGCTCCTGGCTCCCGGCCACTCGGGTGGGTaGGCTGCTCTGGGCCACAGT +
Preference number: 5 (lower is better)
Translates to: ASTLVPSVLRENPVLLAPGHSGG*AALGHS
Trigger: ACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCC...GGGAGCCAGGAGCACTGGGTTCTCCCTGAGAACACTGGGCACAAGAGTACTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCAGGCCCGGGACCCATTaGTTCGAGGGGGAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: EWEGIVQVELALHPALFLRPGTH*FEGEGE
Trigger: CTCCCCCTCCCCCTCGAACAAATGGGTCCCGGGCCT...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS TCA 90 bp AGACGAAGACGCCTCCCTTCCCGTCCCGGAAGAGGCACTTGCGGATaGGGCAGCCCTGCACGGAGTTGGCCAGTGCCATGGCCTCCTTAT +
Preference number: 5 (lower is better)
Translates to: RRRRLPSRPGRGTCG*GSPARSWPVPWPPY
Trigger: ATAAGGAGGCCATGGCACTGGCCAACTCCGTGCAGGGCTGCCTCATCCGCAAGTGCCTCTTCCGGGACGGGAAGGGAGGCGTCTTCGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS GCA 90 bp GCGGTTGCTGTGGTAACCACCTTCCACCCGGGCTGTGATCCTCGTTaGCATGGCTGTCACCTTCTGCCCATTGTGGGCTGCCGAGGGACG +
Preference number: 5 (lower is better)
Translates to: AVAVVTTFHPGCDPR*HGCHLLPIVGCRGT
Trigger: CGTCCCTCGGCAGCCCACAATGGGCAGAAGGTGACAGCCATGGCAACGAGGATCACAGCCCGGGTGGAAGGTGGTTACCACAGCAACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGTCCCGGAAGAGGCACTaGCGGATGAGGCAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: AGEGPTGKAEWEGIVQVESRKRH*RMRQPC
Trigger: GCAGGGCTGCCTCATCCGCAAGTGCCTCTTCCGGGA...CTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATCCTGCACCAGGGCCTaGGCACGGCCCCGCACGGCG +
Preference number: 5 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGSCTRA*ARPRTA
Trigger: CGCCGTGCGGGGCCGTGCCAAGGCCCTGGTGCAGGA...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS GCA 90 bp GGTCCTCATCTTCATCCTCACCGCTGGGACTCAGGCCTCCATCGCTaGTGTCCGGGGTCTGGGCCACCCTTTCACCATCACTACCCACCT +
Preference number: 5 (lower is better)
Translates to: GPHLHPHRWDSGLHR*CPGSGPPFHHHYPP
Trigger: AGGTGGGTAGTGATGGTGAAAGGGTGGCCCAGACCCCGGACAGCAGCGATGGAGGCCTGAGTCCCAGCGGTGAGGATGAAGATGAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS GCA 90 bp CAGCCCTGCACGGAGTTGGCCAGTGCCATGGCCTCCTTATCCTTCTaGAGCTCCTGCTGCAGTGAGTTCAGCACTAGGCAGCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: QPCTELASAMASLSF*SSCCSEFSTRQLGS
Trigger: GCTGCCCAGCTGCCTAGTGCTGAACTCACTGCAGCAGGAGCTGCAGAAGGATAAGGAGGCCATGGCACTGGCCAACTCCGTGCAGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 90 bp CTTCTCTCCAAGACTCAGGCTCCACATCTGGCTGGTTGGGCCAATTaGGATGGCGGCACTCGGTGCAACCCAGACACAGCTGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: LLSKTQAPHLAGWAN*DGGTRCNPDTAAAS
Trigger: GCTGGCGGCAGCTGTGTCTGGGTTGCACCGAGTGCCGCCATCCCAATTGGCCCAACCAGCCAGATGTGGAGCCTGAGTCTTGGAGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS-3UTR CAA 90 bp GGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGGGCTGGTTGGGCCAATaGGGATGGCGGCACTCGGTG +
Preference number: 5 (lower is better)
Translates to: GGWCGHAHMGFESFCIWEGWLGQ*GWRHSV
Trigger: CACCGAGTGCCGCCATCCCAATTGGCCCAACCAGCC...CTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGCCCCGGAGCTCCACTTaGCACTGGGCCTCAACCTTG +
Preference number: 5 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGPRSST*HWASTL
Trigger: CAAGGTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGG...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp AGTGTTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGCCGGCAGCACGGCCCTaGAAGATGTGGTTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: SVLEVPCFGGPGPICSRGPAARP*KMWFPL
Trigger: GAGCGGGAACCACATCTTCAAGGGCCGTGCTGCCGG...CCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAGAACCCAGTGCTCCTGGCTCCCGTCACCTTCTGCCCATaGTGGGCTGCCGAGGGACGT +
Preference number: 5 (lower is better)
Translates to: ASTLVPSVLRENPVLLAPVTFCP*WAAEGR
Trigger: ACGTCCCTCGGCAGCCCACAATGGGCAGAAGGTGAC...GGGAGCCAGGAGCACTGGGTTCTCCCTGAGAACACTGGGCACAAGAGTACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS TCA 90 bp GCTGGCGTGAAGACGAGGTTGCACAGGCGTGTGGTTGAGCAGTGCTaGTCAATGCTGGCCAGCAGGGCCACTTCACCCAACTTCCCCTGC +
Preference number: 5 (lower is better)
Translates to: AGVKTRLHRRVVEQC*SMLASRATSPNFPC
Trigger: GCAGGGGAAGTTGGGTGAAGTGGCCCTGCTGGCCAGCATTGATCAGCACTGCTCAACCACACGCCTGTGCAACCTCGTCTTCACGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS TCA 90 bp CCATGGCTGTCACCTTCTGCCCATTGTGGGCTGCCGAGGGACGTCTaGGAGAATTTTCAAGGTGGGGCCGTGCTGGTGGGTTCACCAGGC +
Preference number: 5 (lower is better)
Translates to: PWLSPSAHCGLPRDV*ENFQGGAVLVGSPG
Trigger: GCCTGGTGAACCCACCAGCACGGCCCCACCTTGAAAATTCTCTCAGACGTCCCTCGGCAGCCCACAATGGGCAGAAGGTGACAGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS GCA 90 bp TTGGGCCAATTGGGATGGCGGCACTCGGTGCAACCCAGACACAGCTaGCGCCAGCGGGTGCTGTCGAGACTGAGGATCAGTTCATACCAG +
Preference number: 5 (lower is better)
Translates to: LGQLGWRHSVQPRHS*RQRVLSRLRISSYQ
Trigger: CTGGTATGAACTGATCCTCAGTCTCGACAGCACCCGCTGGCGGCAGCTGTGTCTGGGTTGCACCGAGTGCCGCCATCCCAATTGGCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000541607.1
CDS CCA 90 bp AGGATAGTCTGTACATCAGCTGGTCCTCATCTTCATCCTCACCGCTaGGACTCAGGCCTCCATCGCTGCTGTCCGGGGTCTGGGCCACCC +
Preference number: 5 (lower is better)
Translates to: RIVCTSAGPHLHPHR*DSGLHRCCPGSGPP
Trigger: GGGTGGCCCAGACCCCGGACAGCAGCGATGGAGGCCTGAGTCCCAGCGGTGAGGATGAAGATGAGGACCAGCTGATGTACAGACTATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS-3UTR CAA 90 bp GTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTGGATCCAATGTCACAGGTCTTaGGGCTCCAGGCCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: VGWLLWATVMPLSPFAWIQCHRS*GSRPGP
Trigger: GGGACCAGGCCTGGAGCCCAAAGACCTGTGACATTG...GATCCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp ATGGTGATGGGCCGGCGCAGTGGGTCGTCCTCCTTCTCCAGCTCTGTCTCCCAGACCCCACTTTGCCGGTaGCAGGAGATGCTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: MVMGRRSGSSSFSSSVSQTPLCR*QEMLLL
Trigger: CAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGT...CTGGGAGACAGAGCTGGAGAAGGAGGACGACCCACTGCGCCGGCCCATCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACACCCCACTTTGCCGGTaGCAGGAGATGCTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHTPLCR*QEMLLL
Trigger: CAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGT...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACAGCCCGCTGCCCCGGTaGCCAATGATATCGTTTTCA +
Preference number: 5 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHSPLPR*PMISFS
Trigger: TGAAAACGATATCATTGGCAACCGGGGCAGCGGGCT...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS CCA 90 bp ACCGCACTGCGTAAGTCAGGTTCCGGAAGATGTTTCCTTCCATCTTaGCTCTGCCGTGGGAGCAGACGAAGACGCCTCCCTTCCCGTCCC +
Preference number: 5 (lower is better)
Translates to: TALRKSGSGRCFLPS*LCRGSRRRRLPSRP
Trigger: GGGACGGGAAGGGAGGCGTCTTCGTCTGCTCCCACGGCAGAGCCAAGATGGAAGGAAACATCTTCCGGAACCTGACTTACGCAGTGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 90 bp CGGGCTGTGATCCTCGTTGCCATGGCTGTCACCTTCTGCCCATTGTaGGCTGCCGAGGGACGTCTGAGAGAATTTTCAAGGTGGGGCCGT +
Preference number: 5 (lower is better)
Translates to: RAVILVAMAVTFCPL*AAEGRLREFSRWGR
Trigger: ACGGCCCCACCTTGAAAATTCTCTCAGACGTCCCTCGGCAGCCCACAATGGGCAGAAGGTGACAGCCATGGCAACGAGGATCACAGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCGGCTGGTTGGGCCAATaGGGATGGCGGCACTCGGTG +
Preference number: 5 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSGWLGQ*GWRHSV
Trigger: CACCGAGTGCCGCCATCCCAATTGGCCCAACCAGCC...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GCATGGGACAACCTCCAGAGTGGAGCAGGGGGTGGCCACGGGCAGGGAGACTGGCAAGATGATTTCACCTaGCTCTTCGTACACACCTGG +
Preference number: 5 (lower is better)
Translates to: AWDNLQSGAGGGHGQGDWQDDFT*LFVHTW
Trigger: CCAGGTGTGTACGAAGAGCAAGGTGAAATCATCTTG...CCAGTCTCCCTGCCCGTGGCCACCCCCTGCTCCACTCTGGAGGTTGTCCCATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GCCTCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCTCCTGTGAGCCAGCCTaGGAGCCTGGCTTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: ASVVIDTIAPELHFALGLSCEPA*EPGFGE
Trigger: CTCCCCAAAGCCAGGCTCCAAGGCTGGCTCACAGGA...GAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp CAGCTGCAGCCCGCTGCCCCGGTTGCCAATGATATCGTTTTCAATGACGATGGTTCCCGGAAGAGGCACTaGCGGATGAGGCAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: QLQPAAPVANDIVFNDDGSRKRH*RMRQPC
Trigger: GCAGGGCTGCCTCATCCGCAAGTGCCTCTTCCGGGA...ACCATCGTCATTGAAAACGATATCATTGGCAACCGGGGCAGCGGGCTGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCAGGAGATGCTGTTGTaGGCCACTCGGGTGGGTTGG +
Preference number: 5 (lower is better)
Translates to: GGWCGHAHMGFESFCIWEQEMLL*ATRVGW
Trigger: CCAACCCACCCGAGTGGCCAACAACAGCATCTCCTG...CTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCGTCCTCCTTCTCCTTGCAGGAGATGCTGTaGTTGGCCACTCGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: DSTRAMVMGRRSGSSSFSLQEML*LATRVG
Trigger: ACCCACCCGAGTGGCCAACAACAGCATCTCCTGCAA...GGAGAAGGAGGACGACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp CCAACAGAGCAGCACCTAGGGCCAATAGAACCAGCCACGCAGCCAAGTGCACGACACTGGGCCTCAACCTaGACCCCACTTTGCCGGTTG +
Preference number: 5 (lower is better)
Translates to: PTEQHLGPIEPATQPSARHWAST*TPLCRL
Trigger: CAACCGGCAAAGTGGGGTCAAGGTTGAGGCCCAGTG...TCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTGCTGCTCTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTGAGATGGTGCTGTCGCCCTaGGTGATAATGCCGTGGCCT +
Preference number: 5 (lower is better)
Translates to: AGEGPTGKAEWEGIVQVEMVLSP*VIMPWP
Trigger: AGGCCACGGCATTATCACCAAGGGCGACAGCACCAT...CTCAACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp CAGGCTGGTGAAGGCCCCACAGGAAAGGCCGAGTGGGAGGGGATTGTTCAGGTTAGGGGATTGTTCAGGTaGAGCTGGCCCTGCATCCAG +
Preference number: 5 (lower is better)
Translates to: QAGEGPTGKAEWEGIVQVRGLFR*SWPCIQ
Trigger: CTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCT...AACCTGAACAATCCCCTCCCACTCGGCCTTTCCTGTGGGGCCTTCACCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS TCA 90 bp AGAAGACACTGCGGTTGCTGTGGTAACCACCTTCCACCCGGGCTGTaGTCCTCGTTGCCATGGCTGTCACCTTCTGCCCATTGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: RRHCGCCGNHLPPGL*SSLPWLSPSAHCGL
Trigger: CAGCCCACAATGGGCAGAAGGTGACAGCCATGGCAACGAGGATCACAGCCCGGGTGGAAGGTGGTTACCACAGCAACCGCAGTGTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS GCA 90 bp CTGCGTAAGTCAGGTTCCGGAAGATGTTTCCTTCCATCTTGGCTCTaGCGTGGGAGCAGACGAAGACGCCTCCCTTCCCGTCCCGGAAGA +
Preference number: 5 (lower is better)
Translates to: LRKSGSGRCFLPSWL*RGSRRRRLPSRPGR
Trigger: TCTTCCGGGACGGGAAGGGAGGCGTCTTCGTCTGCTCCCACGGCAGAGCCAAGATGGAAGGAAACATCTTCCGGAACCTGACTTACGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS GCA 90 bp TGTGATCCTCGTTGCCATGGCTGTCACCTTCTGCCCATTGTGGGCTaGCGAGGGACGTCTGAGAGAATTTTCAAGGTGGGGCCGTGCTGG +
Preference number: 5 (lower is better)
Translates to: CDPRCHGCHLLPIVG*RGTSERIFKVGPCW
Trigger: CCAGCACGGCCCCACCTTGAAAATTCTCTCAGACGTCCCTCGGCAGCCCACAATGGGCAGAAGGTGACAGCCATGGCAACGAGGATCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS GCA 90 bp CCTTCCACCCGGGCTGTGATCCTCGTTGCCATGGCTGTCACCTTCTaGCCATTGTGGGCTGCCGAGGGACGTCTGAGAGAATTTTCAAGG +
Preference number: 5 (lower is better)
Translates to: PSTRAVILVAMAVTF*PLWAAEGRLREFSR
Trigger: CCTTGAAAATTCTCTCAGACGTCCCTCGGCAGCCCACAATGGGCAGAAGGTGACAGCCATGGCAACGAGGATCACAGCCCGGGTGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS CCA 90 bp TGCTGCTTGAAGGCTTCTCTCCAAGACTCAGGCTCCACATCTGGCTaGTTGGGCCAATTGGGATGGCGGCACTCGGTGCAACCCAGACAC +
Preference number: 5 (lower is better)
Translates to: CCLKASLQDSGSTSG*LGQLGWRHSVQPRH
Trigger: GTGTCTGGGTTGCACCGAGTGCCGCCATCCCAATTGGCCCAACCAGCCAGATGTGGAGCCTGAGTCTTGGAGAGAAGCCTTCAAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 90 bp TGCCCATTGTGGGCTGCCGAGGGACGTCTGAGAGAATTTTCAAGGTaGGGCCGTGCTGGTGGGTTCACCAGGCGCCACGTATCAGACTTT +
Preference number: 5 (lower is better)
Translates to: CPLWAAEGRLREFSR*GRAGGFTRRHVSDF
Trigger: AAAGTCTGATACGTGGCGCCTGGTGAACCCACCAGCACGGCCCCACCTTGAAAATTCTCTCAGACGTCCCTCGGCAGCCCACAATGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS CCA 90 bp CATCCACACACCACAGCCCTTGTTAGCTGGGACAGTGAGAGGAGCTaGTCACCGACACTGAACTCAGGTGAAGCGGCACCTGAGTCTCCC +
Preference number: 5 (lower is better)
Translates to: HPHTTALVSWDSERS*SPTLNSGEAAPESP
Trigger: GGGAGACTCAGGTGCCGCTTCACCTGAGTTCAGTGTCGGTGACCAGCTCCTCTCACTGTCCCAGCTAACAAGGGCTGTGGTGTGTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543968.5
CDS-3UTR CAA 90 bp TTGTTGGCCACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCTGCACAGGCGTGTGGTaGAGCAGTGCTGATCAATGC +
Preference number: 5 (lower is better)
Translates to: LLATRVGWLLWATVMPLSCTGVW*SSADQC
Trigger: GCATTGATCAGCACTGCTCAACCACACGCCTGTGCA...GGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTGGATCACACACAGGGGCACGTaGTGCAGGAAGATATGGGTG +
Preference number: 5 (lower is better)
Translates to: VGWLLWATVMPLSPFAWITHRGT*CRKIWV
Trigger: CACCCATATCTTCCTGCACAACGTGCCCCTGTGTGT...GATCCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GCCAGTACTCTTGTGCCCAGTGTTCTCAGGGAGAACCCAGTGCTCCTGGCTCCCACACACAGGGGCACGTaGTGCAGGAAGATATGGGTG +
Preference number: 5 (lower is better)
Translates to: ASTLVPSVLRENPVLLAPTHRGT*CRKIWV
Trigger: CACCCATATCTTCCTGCACAACGTGCCCCTGTGTGT...GGGAGCCAGGAGCACTGGGTTCTCCCTGAGAACACTGGGCACAAGAGTACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGATGTTTCCTTCCATCTaGGCTCTGCCGTGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGMFPSI*ALPWEQ
Trigger: CTGCTCCCACGGCAGAGCCAAGATGGAAGGAAACAT...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GCCTCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCCTCGCTGAAGTTCTCTaGAGCCCTGTGGCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: ASVVIDTIAPELHFALGLLAEVL*SPVASR
Trigger: CCTCGAGGCCACAGGGCTCAAGAGAACTTCAGCGAG...GAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp CTCGCTGGAGCCATCCTTCTGGCTAAATACTGCCACTCCATACAGGCCATTGTAGGCCACTCGGGTGGGTaGGCTGCTCTGGGCCACAGT +
Preference number: 5 (lower is better)
Translates to: LAGAILLAKYCHSIQAIVGHSGG*AALGHS
Trigger: ACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCC...TACAATGGCCTGTATGGAGTGGCAGTATTTAGCCAGAAGGATGGCTCCAGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp CAGCGCTCATCCATGAGAACACAGATGCGAACGAGAGGCCCAGGTACCCTCATCGGATGGAGTAGAGCCTaGTGCATCCCTGCCCACCCA +
Preference number: 5 (lower is better)
Translates to: QRSSMRTQMRTRGPGTLIGWSRA*CIPAHP
Trigger: TGGGTGGGCAGGGATGCACAAGGCTCTACTCCATCC...GATGAGGGTACCTGGGCCTCTCGTTCGCATCTGTGTTCTCATGGATGAGCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp CCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCTGGTGTGGGCACGCTCACACGCTCACATGGGGTTaGAATCCTTCTGCATTTGGG +
Preference number: 5 (lower is better)
Translates to: PHLNRLMLRRGGWCGHAHTLTWG*NPSAFG
Trigger: CCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGT...GTGAGCGTGCCCACACCAGCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS CCA 90 bp GTAATGCTGCTTGAAGGCTTCTCTCCAAGACTCAGGCTCCACATCTaGCTGGTTGGGCCAATTGGGATGGCGGCACTCGGTGCAACCCAG +
Preference number: 5 (lower is better)
Translates to: VMLLEGFSPRLRLHI*LVGPIGMAALGATQ
Trigger: CTGGGTTGCACCGAGTGCCGCCATCCCAATTGGCCCAACCAGCCAGATGTGGAGCCTGAGTCTTGGAGAGAAGCCTTCAAGCAGCATTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 90 bp AGACGAGGTTGCACAGGCGTGTGGTTGAGCAGTGCTGATCAATGCTaGCCAGCAGGGCCACTTCACCCAACTTCCCCTGCCCTACAATCT +
Preference number: 5 (lower is better)
Translates to: RRGCTGVWLSSADQC*PAGPLHPTSPALQS
Trigger: AGATTGTAGGGCAGGGGAAGTTGGGTGAAGTGGCCCTGCTGGCCAGCATTGATCAGCACTGCTCAACCACACGCCTGTGCAACCTCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS-3UTR CAA 90 bp AGTGTTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGGGTACAGAACTTCACTaGGCAAGTACCCGGGCCATG +
Preference number: 5 (lower is better)
Translates to: SVLEVPCFGGPGPICSRGGTELH*ASTRAM
Trigger: CATGGCCCGGGTACTTGCCAAGTGAAGTTCTGTACC...CCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCCCATTCGCGTGGATCTTCGCGTGGATCACATaGGTGATGACATGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: VGWLLWATVMPLSPFAWIFAWIT*VMTCSA
Trigger: GGCACTGCATGTCATCACCAATGTGATCCACGCGAA...GATCCACGCGAATGGGGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp TCTGTTGTCATAGATACCATTGCCCCGGAGCTCCACTTTGCACTGGGCCTCAACCCCCGGAGCTCCACTTaGCACTGGGCCTCAACCTTG +
Preference number: 5 (lower is better)
Translates to: SVVIDTIAPELHFALGLNPRSST*HWASTL
Trigger: CAAGGTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGG...GTTGAGGCCCAGTGCAAAGTGGAGCTCCGGGGCAATGGTATCTATGACAACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGAGCACCCATCCAGGCTaGGCCCTGAAGCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMSTHPG*ALKQVC
Trigger: ACAGACCTGCTTCAGGGCCAAGCCTGGATGGGTGCT...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGACAATGTCACAGGTCTTaGGGCTCCAGGCCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGQCHRS*GSRPGP
Trigger: GGGACCAGGCCTGGAGCCCAAAGACCTGTGACATTG...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp TGGGACTTGGACATATTCACAGTACGGTTCAGTAAAGTCCTCTGGGAGCTGGCCTCCTGTGAGCCAGCCTaGGAGCCTGGCTTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: WDLDIFTVRFSKVLWELASCEPA*EPGFGE
Trigger: CTCCCCAAAGCCAGGCTCCAAGGCTGGCTCACAGGA...GGCCAGCTCCCAGAGGACTTTACTGAACCGTACTGTGAATATGTCCAAGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp TTGTTGGCCACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCATGATGCCTTTCCCATaGCCAAGGACGACAATGCCA +
Preference number: 5 (lower is better)
Translates to: LLATRVGWLLWATVMPLSMMPFP*PRTTMP
Trigger: TGGCATTGTCGTCCTTGGCAATGGGAAAGGCATCAT...GGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGACTCGCTGAAGTTCTCTaGAGCCCTGTGGCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGLAEVL*SPVASR
Trigger: CCTCGAGGCCACAGGGCTCAAGAGAACTTCAGCGAG...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GACAGTGCCAGGGATAGAAGAGGCCAGTACTCTTGTGCCCAGTGTTCTCAGGGATTGCAGGAGATGCTGTaGTTGGCCACTCGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: DSARDRRGQYSCAQCSQGLQEML*LATRVG
Trigger: ACCCACCCGAGTGGCCAACAACAGCATCTCCTGCAA...TCCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTTCTATCCCTGGCACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GACAGTGCCAGGGATAGAAGAGGCCAGTACTCTTGTGCCCAGTGTTCTCAGGGATTCAGCATGTCCCTCTaGTCATCCCTGGGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: DSARDRRGQYSCAQCSQGFSMSL*SSLGQP
Trigger: AGGCTGCCCCAGGGATGACAAGAGGGACATGCTGAA...TCCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTTCTATCCCTGGCACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp TTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAGGGACCTGGCTTTGGGACTaGGACATATTCACAGTACGG +
Preference number: 5 (lower is better)
Translates to: FWRYRVLEARDPFVRGGGTWLWD*DIFTVR
Trigger: CCGTACTGTGAATATGTCCAAGTCCCAAAGCCAGGT...CCCTCCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp CAGCGCTCATCCATGAGAACACAGATGCGAACGAGAGGCCCAGGTACCCTCATCAAGAGGCCAGTACTCTaGTGCCCAGTGTTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: QRSSMRTQMRTRGPGTLIKRPVL*CPVFSG
Trigger: CCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTT...GATGAGGGTACCTGGGCCTCTCGTTCGCATCTGTGTTCTCATGGATGAGCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS TCA 90 bp GTTGCCGGCAATCAAGCCACCGCCCTCCAAGCGAAGAAAGATGCCTaGCGCTCGGCAGCGGTAAATGTCGTTCCTGAGCATGATGATCTT +
Preference number: 5 (lower is better)
Translates to: VAGNQATALQAKKDA*RSAAVNVVPEHDDL
Trigger: AAGATCATCATGCTCAGGAACGACATTTACCGCTGCCGAGCGTCAGGCATCTTTCTTCGCTTGGAGGGCGGTGGCTTGATTGCCGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000543968.5
CDS CCA 90 bp TGGCTGCCCTCGATAACAATGTCACAGGTCTTTGGGCTCCAGGCCTaGTCCCGGCTCTCTAGGTCCAGGGACATTAAAAAGTCAGAGTCC +
Preference number: 5 (lower is better)
Translates to: WLPSITMSQVFGLQA*SRLSRSRDIKKSES
Trigger: GGACTCTGACTTTTTAATGTCCCTGGACCTAGAGAGCCGGGACCAGGCCTGGAGCCCAAAGACCTGTGACATTGTTATCGAGGGCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS-3UTR CAA 90 bp GAGTGGGAGGGGATTGTTCAGGTTGAGCTGGCCCTGCATCCAGCCCTCTTCCTCAAGTCCAAGGCATTCTaGGTCCATGTCTTGGATGCA +
Preference number: 5 (lower is better)
Translates to: EWEGIVQVELALHPALFLKSKAF*VHVLDA
Trigger: TGCATCCAAGACATGGACCAAGAATGCCTTGGACTT...GAGGAAGAGGGCTGGATGCAGGGCCAGCTCAACCTGAACAATCCCCTCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp ATGGGGGAGGCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATATGTTTCCTTCCATCTaGGCTCTGCCGTGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: MGEAGRHHPHTTALVSVDMFPSI*ALPWEQ
Trigger: CTGCTCCCACGGCAGAGCCAAGATGGAAGGAAACAT...ATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGCCTCCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GCAGATGAGGTTACTCCTGAGAACGGGGATCCCTCCACGGCGGATGTCCACACCCACAGTATGAGTGGGTaGGACTTTTTCCGGATGTCT +
Preference number: 5 (lower is better)
Translates to: ADEVTPENGDPSTADVHTHSMSG*DFFRMS
Trigger: AGACATCCGGAAAAAGTCCAACCCACTCATACTGTG...GGTGTGGACATCCGCCGTGGAGGGATCCCCGTTCTCAGGAGTAACCTCATCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGATGATGCCTTTCCCATaGCCAAGGACGACAATGCCA +
Preference number: 5 (lower is better)
Translates to: GGWCGHAHMGFESFCIWEMMPFP*PRTTMP
Trigger: TGGCATTGTCGTCCTTGGCAATGGGAAAGGCATCAT...CTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTACTCCTTCTATGAGGCCTTaGCCTTCGTCTCCCACAACC +
Preference number: 5 (lower is better)
Translates to: GATKQVQRTVPGIEEASTPSMRP*PSSPTT
Trigger: GGTTGTGGGAGACGAAGGCAAAGGCCTCATAGAAGG...AGTACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATGGTATTTCCCAGGAGATGCTGTTGTaGGCCACTCGGGTGGGTTGG +
Preference number: 5 (lower is better)
Translates to: AGRHHPHTTALVSVDGISQEMLL*ATRVGW
Trigger: CCAACCCACCCGAGTGGCCAACAACAGCATCTCCTG...GGAAATACCATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTACTAACCTTGACCCCACTTaGCCGGTTGCAGGAGATGCT +
Preference number: 5 (lower is better)
Translates to: GATKQVQRTVPGIEEASTNLDPT*PVAGDA
Trigger: AGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGTT...AGTACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATGGTATTTCCCACTGGGCCTCAACCTaGACCCCACTTTGCCGGTTG +
Preference number: 5 (lower is better)
Translates to: AGRHHPHTTALVSVDGISHWAST*TPLCRL
Trigger: CAACCGGCAAAGTGGGGTCAAGGTTGAGGCCCAGTG...GGAAATACCATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp ATGGGGGAGGCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATAGCCCGCTGCCCCGGTaGCCAATGATATCGTTTTCA +
Preference number: 5 (lower is better)
Translates to: MGEAGRHHPHTTALVSVDSPLPR*PMISFS
Trigger: TGAAAACGATATCATTGGCAACCGGGGCAGCGGGCT...ATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGCCTCCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGTCTGTGATGAGGCCTTaGCCGTTCTCATTCACTGCT +
Preference number: 5 (lower is better)
Translates to: GGWCGHAHMGFESFCIWESVMRP*PFSFTA
Trigger: AGCAGTGAATGAGAACGGCAAAGGCCTCATCACAGA...CTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp TTTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGACAGAGTGGGGAGGCTaGGGAGGGTCAGTAAAGACC +
Preference number: 5 (lower is better)
Translates to: FTATHIGATKQVQRTVPGTEWGG*GGSVKT
Trigger: GGTCTTTACTGACCCTCCCAAGCCTCCCCACTCTGT...CCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS GCA 90 bp ACGGATGACATTTTCTGTGATGAGGCCTTTGCCGTTCTCATTCACTaGTATGCCGGCAGCACGGCCCTTGAAGATGTGGTTCCCGCTCAC +
Preference number: 5 (lower is better)
Translates to: TDDIFCDEAFAVLIH*YAGSTALEDVVPAH
Trigger: GTGAGCGGGAACCACATCTTCAAGGGCCGTGCTGCCGGCATAGCAGTGAATGAGAACGGCAAAGGCCTCATCACAGAAAATGTCATCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432825.7
ENST00000543968.5
CDS-3UTR CAA 90 bp TTGTTGGCCACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCAAAGTGGGTGAGGACTaGATAAGCCCTAGTAGATAC +
Preference number: 5 (lower is better)
Translates to: LLATRVGWLLWATVMPLSKVGED*ISPSRY
Trigger: GTATCTACTAGGGCTTATCAAGTCCTCACCCACTTT...GGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GACAGTGCCAGGGATAGAAGAGGCCAGTACTCTTGTGCCCAGTGTTCTCAGGGATTCGCGTGGATCACATaGGTGATGACATGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: DSARDRRGQYSCAQCSQGFAWIT*VMTCSA
Trigger: GGCACTGCATGTCATCACCAATGTGATCCACGCGAA...TCCCTGAGAACACTGGGCACAAGAGTACTGGCCTCTTCTATCCCTGGCACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp AACGAGAGGCCCAGGTACCCTCATCTGAACAGGCTGATGCTCAGGAGGGGCGGCCAGGAACTTGTTGTTTaGCATGATGCATTCTCGGTT +
Preference number: 5 (lower is better)
Translates to: NERPRYPHLNRLMLRRGGQELVV*HDAFSV
Trigger: AACCGAGAATGCATCATGCAAAACAACAAGTTCCTG...GCCGCCCCTCCTGAGCATCAGCCTGTTCAGATGAGGGTACCTGGGCCTCTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATAGAAGAGGCCAGTACTTTGCCCACTTTCTTCTaGCTATGGGCTGTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GATKQVQRTVPGIEEASTLPTFF*LWAVEL
Trigger: CAGCTCCACAGCCCATAGCAAGAAGAAAGTGGGCAA...AGTACTGGCCTCTTCTATCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCTGCCCGTTCTCAAAGTaGCAGTTGTCAAACTGGACG +
Preference number: 5 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSCPFSK*QLSNWT
Trigger: CGTCCAGTTTGACAACTGCAACTTTGAGAACGGGCA...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATGGTATTTCCGGTACAGAACTTCACTaGGCAAGTACCCGGGCCATG +
Preference number: 5 (lower is better)
Translates to: AGRHHPHTTALVSVDGISGTELH*ASTRAM
Trigger: CATGGCCCGGGTACTTGCCAAGTGAAGTTCTGTACC...GGAAATACCATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp AGTGTTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAAAGTGGGTGAGGACTaGATAAGCCCTAGTAGATAC +
Preference number: 5 (lower is better)
Translates to: SVLEVPCFGGPGPICSRGKVGED*ISPSRY
Trigger: GTATCTACTAGGGCTTATCAAGTCCTCACCCACTTT...CCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATGGTATTTCCAACCTTGACCCCACTTaGCCGGTTGCAGGAGATGCT +
Preference number: 5 (lower is better)
Translates to: AGRHHPHTTALVSVDGISNLDPT*PVAGDA
Trigger: AGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGTT...GGAAATACCATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp ATTAATACTGTTAGACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCATGGTGCTGTCGCCCTaGGTGATAATGCCGTGGCCT +
Preference number: 5 (lower is better)
Translates to: INTVRLNKSYGDGPAQWVMVLSP*VIMPWP
Trigger: AGGCCACGGCATTATCACCAAGGGCGACAGCACCAT...GACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTCTAACAGTATTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp TTGTTGGCCACTCGGGTGGGTTGGCTGCTCTGGGCCACAGTAATGCCTCTGTCCAGCACTCACTTTTTCTaGAAGACCAGGAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: LLATRVGWLLWATVMPLSSTHFF*KTRNLL
Trigger: CAACAAGTTCCTGGTCTTCAAGAAAAAGTGAGTGCT...GGACAGAGGCATTACTGTGGCCCAGAGCAGCCAACCCACCCGAGTGGCCAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp CCAACAGAGCAGCACCTAGGGCCAATAGAACCAGCCACGCAGCCAAGTGCACGAGAGAAGAGTCTGGGTTaGGTGTGTGTAAAACACAGT +
Preference number: 5 (lower is better)
Translates to: PTEQHLGPIEPATQPSAREKSLG*VCVKHS
Trigger: ACTGTGTTTTACACACACCAAACCCAGACTCTTCTC...TCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTGCTGCTCTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp AGTGTTCTGGAGGTACCGTGTTTTGGAGGCCCGGGACCCATTTGTTCGAGGGGGAAAATTCTGGAGCAGTaGTCTCTCTCCACCTCACTA +
Preference number: 5 (lower is better)
Translates to: SVLEVPCFGGPGPICSRGKILEQ*SLSTSL
Trigger: TAGTGAGGTGGAGAGAGACAACTGCTCCAGAATTTT...CCCCCTCGAACAAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCAGAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATTACAGCGACTCACATaGGGGCCACCAAACAAGTGC +
Preference number: 5 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGLQRLT*GPPNKC
Trigger: GCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS TCA 90 bp CCAAGGCATTCTTGGTCCATGTCTTGGATGCAAGGTAATGCTGCTTaGAGGCTTCTCTCCAAGACTCAGGCTCCACATCTGGCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: PRHSWSMSWMQGNAA*RLLSKTQAPHLAGW
Trigger: CCAACCAGCCAGATGTGGAGCCTGAGTCTTGGAGAGAAGCCTTCAAGCAGCATTACCTTGCATCCAAGACATGGACCAAGAATGCCTTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS GCA 90 bp TTTTCCGGATGTCTACACCAGCCTCTGCATTGTGGTAAATGTTGTTaGCGGCAATCAAGCCACCGCCCTCCAAGCGAAGAAAGATGCCTG +
Preference number: 5 (lower is better)
Translates to: FSGCLHQPLHCGKCC*RQSSHRPPSEERCL
Trigger: CAGGCATCTTTCTTCGCTTGGAGGGCGGTGGCTTGATTGCCGGCAACAACATTTACCACAATGCAGAGGCTGGTGTAGACATCCGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000543968.5
CDS GCA 90 bp CAGTATGAGTGGGTTGGACTTTTTCCGGATGTCTACACCAGCCTCTaGATTGTGGTAAATGTTGTTGCCGGCAATCAAGCCACCGCCCTC +
Preference number: 5 (lower is better)
Translates to: QYEWVGLFPDVYTSL*IVVNVVAGNQATAL
Trigger: GAGGGCGGTGGCTTGATTGCCGGCAACAACATTTACCACAATGCAGAGGCTGGTGTAGACATCCGGAAAAAGTCCAACCCACTCATACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000543968.5
CDS CCA 90 bp TCAGGGTACGTCGTTCCCTCCTCCGGCGGAATAGAGAAAAGCAGATaGAAGACTCCAAGTCCAAGGCATTCTTGGTCCATGTCTTGGATG +
Preference number: 5 (lower is better)
Translates to: SGYVVPSSGGIEKSR*KTPSPRHSWSMSWM
Trigger: CATCCAAGACATGGACCAAGAATGCCTTGGACTTGGAGTCTTCCATCTGCTTTTCTCTATTCCGCCGGAGGAGGGAACGACGTACCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS-3UTR CAA 90 bp GCCCGGAACGAGTGGATCCGGTTCTTTATTACTTTAGTGTCGGACCTGGGCAGCAAGTCCAAGGCATTCTaGGTCCATGTCTTGGATGCA +
Preference number: 5 (lower is better)
Translates to: ARNEWIRFFITLVSDLGSKSKAF*VHVLDA
Trigger: TGCATCCAAGACATGGACCAAGAATGCCTTGGACTT...GCTGCCCAGGTCCGACACTAAAGTAATAAAGAACCGGATCCACTCGTTCCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp TTACAGCGACTCACATTGGGGCCACCAAACAAGTGCAAAGGACAGTGCCAGGGATGCCCGTTCTCAAAGTaGCAGTTGTCAAACTGGACG +
Preference number: 5 (lower is better)
Translates to: LQRLTLGPPNKCKGQCQGCPFSK*QLSNWT
Trigger: CGTCCAGTTTGACAACTGCAACTTTGAGAACGGGCA...TCCCTGGCACTGTCCTTTGCACTTGTTTGGTGGCCCCAATGTGAGTCGCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGCTGAGCATGATGATCTaGCTATTATGTATACACCGC +
Preference number: 5 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVLSMMI*LLCIHR
Trigger: GCGGTGTATACATAATAGCAAGATCATCATGCTCAG...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GGCGGCTGGTGTGGGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTGAGCATGATGATCTaGCTATTATGTATACACCGC +
Preference number: 5 (lower is better)
Translates to: GGWCGHAHMGFESFCIWELSMMI*LLCIHR
Trigger: GCGGTGTATACATAATAGCAAGATCATCATGCTCAG...CTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCCCACACCAGCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGCACAGTATGAGTGGGTaGGACTTTTTCCGGATGTCT +
Preference number: 5 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMHSMSG*DFFRMS
Trigger: AGACATCCGGAAAAAGTCCAACCCACTCATACTGTG...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp ATTAATACTGTTAGACTCAACAAGAGCTATGGTGATGGGCCGGCGCAGTGGGTCCCTTCTATGAGGCCTTaGCCTTCGTCTCCCACAACC +
Preference number: 5 (lower is better)
Translates to: INTVRLNKSYGDGPAQWVPSMRP*PSSPTT
Trigger: GGTTGTGGGAGACGAAGGCAAAGGCCTCATAGAAGG...GACCCACTGCGCCGGCCCATCACCATAGCTCTTGTTGAGTCTAACAGTATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS GCA 90 bp CCCTGCCCTACAATCTCCACAGGCACCTTCAAGATGATTTCACCTTaGTCTTCGTACACACCTGGGAAGAGCACAATTCGGTCATACAGG +
Preference number: 5 (lower is better)
Translates to: PCPTISTGTFKMISP*SSYTPGKSTIRSYR
Trigger: CCTGTATGACCGAATTGTGCTCTTCCCAGGTGTGTACGAAGAGCAAGGTGAAATCATCTTGAAGGTGCCTGTGGAGATTGTAGGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS-3UTR CAA 90 bp ACCTTGACCCCACTTTGCCGGTTGCAGGAGATGCTGTTGTTGGCCACTCGGGTGCTTATTGGAAAAGATTaGATTGTTCCGGATGATGCC +
Preference number: 5 (lower is better)
Translates to: TLTPLCRLQEMLLLATRVLIGKD*IVPDDA
Trigger: GGCATCATCCGGAACAATCAAATCTTTTCCAATAAG...CACCCGAGTGGCCAACAACAGCATCTCCTGCAACCGGCAAAGTGGGGTCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGTGCATTCTCGGTTGTTaGAGATCTGCTGAAAGATGG +
Preference number: 5 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMCILGC*RSAERW
Trigger: CCATCTTTCAGCAGATCTCAAACAACCGAGAATGCA...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp CTTGTTAGCGTAGATGGTATTTCCTTCTATGAGGCCTTTGCCTTCGTCTCCCACAAAGGACAGACAGGTTaGAGGAAGATGGGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: LVSVDGISFYEAFAFVSHKGQTG*RKMGGG
Trigger: GCCGCCACCCATCTTCCTCAAACCTGTCTGTCCTTT...GTGGGAGACGAAGGCAAAGGCCTCATAGAAGGAAATACCATCTACGCTAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GAAACCCACCAGCTTCTATCCCTTCTCCCTGAAAAACATTGCCCACTTTCTTCTTGGAGGTACCGTGTTTaGGAGGCCCGGGACCCATTT +
Preference number: 5 (lower is better)
Translates to: ETHQLLSLLPEKHCPLSSWRYRV*EARDPF
Trigger: AAATGGGTCCCGGGCCTCCAAAACACGGTACCTCCA...AGAAGAAAGTGGGCAATGTTTTTCAGGGAGAAGGGATAGAAGCTGGTGGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS GCA 90 bp GATGGAAGACTCCAAGTCCAAGGCATTCTTGGTCCATGTCTTGGATaGAAGGTAATGCTGCTTGAAGGCTTCTCTCCAAGACTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: DGRLQVQGILGPCLG*KVMLLEGFSPRLRL
Trigger: GAGCCTGAGTCTTGGAGAGAAGCCTTCAAGCAGCATTACCTTGCATCCAAGACATGGACCAAGAATGCCTTGGACTTGGAGTCTTCCATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 90 bp GTGTTTTTGAAGGTACAGAACTTCACTTGGCAAGTACCCGGGCCATaGACCTGGATGTGCCCGTTCTCAAAGTTGCAGTTGTCAAACTGG +
Preference number: 5 (lower is better)
Translates to: VFLKVQNFTWQVPGP*TWMCPFSKLQLSNW
Trigger: CCAGTTTGACAACTGCAACTTTGAGAACGGGCACATCCAGGTCCATGGCCCGGGTACTTGCCAAGTGAAGTTCTGTACCTTCAAAAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 90 bp TTGTGCAGGAAGATATGGGTGTTTTTGAAGGTACAGAACTTCACTTaGCAAGTACCCGGGCCATGGACCTGGATGTGCCCGTTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: LCRKIWVFLKVQNFT*QVPGPWTWMCPFSK
Trigger: CTTTGAGAACGGGCACATCCAGGTCCATGGCCCGGGTACTTGCCAAGTGAAGTTCTGTACCTTCAAAAACACCCATATCTTCCTGCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS-3UTR CAA 90 bp GAAACCCACCAGCTTCTATCCCTTCTCCCTGAAAAACATTGCCCACTTTCTTCTTGCACAGGCGTGTGGTaGAGCAGTGCTGATCAATGC +
Preference number: 5 (lower is better)
Translates to: ETHQLLSLLPEKHCPLSSCTGVW*SSADQC
Trigger: GCATTGATCAGCACTGCTCAACCACACGCCTGTGCA...AGAAGAAAGTGGGCAATGTTTTTCAGGGAGAAGGGATAGAAGCTGGTGGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGTCAACAGTCACAGAGTaGTTTTCACTGCCCACAAAT +
Preference number: 5 (lower is better)
Translates to: DKAESAQYPEREQRKATESTVTE*FSLPTN
Trigger: ATTTGTGGGCAGTGAAAACAACTCTGTGACTGTTGA...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp CAGCTGCAGCCCGCTGCCCCGGTTGCCAATGATATCGTTTTCAATGACGATGGTATGGTCTTACTGGTTTaGCCCTGGAAGATGATGTTT +
Preference number: 5 (lower is better)
Translates to: QLQPAAPVANDIVFNDDGMVLLV*PWKMMF
Trigger: AAACATCATCTTCCAGGGCAAAACCAGTAAGACCAT...ACCATCGTCATTGAAAACGATATCATTGGCAACCGGGGCAGCGGGCTGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGATGGTCTTACTGGTTTaGCCCTGGAAGATGATGTTT +
Preference number: 5 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMMVLLV*PWKMMF
Trigger: AAACATCATCTTCCAGGGCAAAACCAGTAAGACCAT...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GGCACGCTCACATGGGGTTTGAATCCTTCTGCATTTGGGAGCTCTCTGGGGATGCTTATTGGAAAAGATTaGATTGTTCCGGATGATGCC +
Preference number: 5 (lower is better)
Translates to: GTLTWGLNPSAFGSSLGMLIGKD*IVPDDA
Trigger: GGCATCATCCGGAACAATCAAATCTTTTCCAATAAG...CATCCCCAGAGAGCTCCCAAATGCAGAAGGATTCAAACCCCATGTGAGCGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS TCA 90 bp TGTAAATGCCAGCCTCCTTATTGGAAAAGATTTGATTGTTCCGGATaGTGCCTTTCCCATTGCCAAGGACGACAATGCCAGAGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: CKCQPPYWKRFDCSG*CLSHCQGRQCQSEG
Trigger: GCCTTCGCTCTGGCATTGTCGTCCTTGGCAATGGGAAAGGCATCATCCGGAACAATCAAATCTTTTCCAATAAGGAGGCTGGCATTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000543968.5
CDS-3UTR CAA 90 bp GACAAGGCAGAAAGTGCTCAGTACCCTGAGAGGGAGCAGAGAAAGGCCACTGAGAAGATATGGGTGTTTTaGAAGGTACAGAACTTCACT +
Preference number: 5 (lower is better)
Translates to: DKAESAQYPEREQRKATEKIWVF*KVQNFT
Trigger: AGTGAAGTTCTGTACCTTCAAAAACACCCATATCTT...CTCAGTGGCCTTTCTCTGCTCCCTCTCAGGGTACTGAGCACTTTCTGCCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp GCTGGACGACATCATCCACACACCACAGCCCTTGTTAGCGTAGATGGTATTTCCTCAACAGTCACAGAGTaGTTTTCACTGCCCACAAAT +
Preference number: 5 (lower is better)
Translates to: AGRHHPHTTALVSVDGISSTVTE*FSLPTN
Trigger: ATTTGTGGGCAGTGAAAACAACTCTGTGACTGTTGA...GGAAATACCATCTACGCTAACAAGGGCTGTGGTGTGTGGATGATGTCGTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS GCA 90 bp GTCGTTCCTGAGCATGATGATCTTGCTATTATGTATACACCGCACTaGGTAAGTCAGGTTCCGGAAGATGTTTCCTTCCATCTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: VVPEHDDLAIMYTPH*VSQVPEDVSFHLGS
Trigger: AGAGCCAAGATGGAAGGAAACATCTTCCGGAACCTGACTTACGCAGTGCGGTGTATACATAATAGCAAGATCATCATGCTCAGGAACGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS-3UTR CAA 90 bp CTTGTTAGCGTAGATGGTATTTCCTTCTATGAGGCCTTTGCCTTCGTCTCCCACTGCATTCTCGGTTGTTaGAGATCTGCTGAAAGATGG +
Preference number: 5 (lower is better)
Translates to: LVSVDGISFYEAFAFVSHCILGC*RSAERW
Trigger: CCATCTTTCAGCAGATCTCAAACAACCGAGAATGCA...GTGGGAGACGAAGGCAAAGGCCTCATAGAAGGAAATACCATCTACGCTAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS-3UTR CAA 90 bp CTTGTTAGCGTAGATGGTATTTCCTTCTATGAGGCCTTTGCCTTCGTCTCCCACCAGGAACTTGTTGTTTaGCATGATGCATTCTCGGTT +
Preference number: 5 (lower is better)
Translates to: LVSVDGISFYEAFAFVSHQELVV*HDAFSV
Trigger: AACCGAGAATGCATCATGCAAAACAACAAGTTCCTG...GTGGGAGACGAAGGCAAAGGCCTCATAGAAGGAAATACCATCTACGCTAACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS GCA 90 bp ATTAGAGATAGAGTCCAGACAGATGAAGGCTCTGCCCAAAGTCACTaGGTGAGTGAGAAGAGTTTTCTTCCTGTGATTATCTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: IRDRVQTDEGSAQSH*VSEKSFLPVIILFS
Trigger: GGAAAACAAGATAATCACAGGAAGAAAACTCTTCTCACTCACGCAGTGACTTTGGGCAGAGCCTTCATCTGTCTGGACTCTATCTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544208.1
CDS-3UTR CAA 90 bp GAAACCCACCAGCTTCTATCCCTTCTCCCTGAAAAACATTGCCCACTTTCTTCTGTATCAGACTTTTTCTaGAAGACCAGGAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: ETHQLLSLLPEKHCPLSSVSDFF*KTRNLL
Trigger: CAACAAGTTCCTGGTCTTCAAGAAAAAGTCTGATAC...AGAAGAAAGTGGGCAATGTTTTTCAGGGAGAAGGGATAGAAGCTGGTGGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS-3UTR CAA 90 bp AAGACCAGGAACTTGTTGTTTTGCATGATGCATTCTCGGTTGTTTGAGATCTGCAAGATATGGGTGTTTTaGAAGGTACAGAACTTCACT +
Preference number: 5 (lower is better)
Translates to: KTRNLLFCMMHSRLFEICKIWVF*KVQNFT
Trigger: AGTGAAGTTCTGTACCTTCAAAAACACCCATATCTT...GCAGATCTCAAACAACCGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276960.7
CDS GCA 72 bp CCCGCTGGAGCCGCAGCAGCCGGTAGGATTGCGGCGTaGGGCCAGCCCCGCCCGGGGGCGGACAGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: PAGAAAAGRIAA*GQPRPGADSCL
Trigger: CAGGCAGCTGTCCGCCCCCGGGCGGGGCTGGCCGCACGCCGCAATCCTACCGGCTGCTGCGGCTCCAGCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS TCA 72 bp CGCCTCCCTTCCCGTCCCGGAAGAGGCACTTGCGGATaGGGCAGCCCTGCACGGAGTTGGCCAGTGCCATGG +
Preference number: 6 (lower is better)
Translates to: RLPSRPGRGTCG*GSPARSWPVPW
Trigger: CCATGGCACTGGCCAACTCCGTGCAGGGCTGCCTCATCCGCAAGTGCCTCTTCCGGGACGGGAAGGGAGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CAA 90 bp TGGGAGCAGACGAAGACGCCTCCCTTCCCGTCCCGGAAGAGGCACTaGCGGATGAGGCAGCCCTGCACGGAGTTGGCCAGTGCCATGGCC +
Preference number: 6 (lower is better)
Translates to: WEQTKTPPFPSRKRH*RMRQPCTELASAMA
Trigger: GGCCATGGCACTGGCCAACTCCGTGCAGGGCTGCCTCATCCGCAAGTGCCTCTTCCGGGACGGGAAGGGAGGCGTCTTCGTCTGCTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS GCA 72 bp CTGGCTGGTTGGGCCAATTGGGATGGCGGCACTCGGTaGAACCCAGACACAGCTGCCGCCAGCGGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: LAGWANWDGGTR*NPDTAAASGCC
Trigger: ACAGCACCCGCTGGCGGCAGCTGTGTCTGGGTTGCACCGAGTGCCGCCATCCCAATTGGCCCAACCAGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000541607.1
CDS CCA 72 bp GGCCAAGGCACTGCCCAGGCTGTCAAACTCACGGCCTaGCCCAACACTCAGGGTACGTCGTTCCCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: GQGTAQAVKLTA*PNTQGTSFPPP
Trigger: CGGAGGAGGGAACGACGTACCCTGAGTGTTGGGCCAGGCCGTGAGTTTGACAGCCTGGGCAGTGCCTTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CAA 72 bp ACGAAGACGCCTCCCTTCCCGTCCCGGAAGAGGCACTaGCGGATGAGGCAGCCCTGCACGGAGTTGGCCAGT +
Preference number: 6 (lower is better)
Translates to: TKTPPFPSRKRH*RMRQPCTELAS
Trigger: ACTGGCCAACTCCGTGCAGGGCTGCCTCATCCGCAAGTGCCTCTTCCGGGACGGGAAGGGAGGCGTCTTCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS GCA 72 bp GGCCCAGGTCGGGAAGGTGCAAGTAGGCTAAGATCATaGGCCACAGCTCCAAGGGGAGGCCACCAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: GPGREGASRLRS*ATAPRGGHQPP
Trigger: TGGAGGCTGGTGGCCTCCCCTTGGAGCTGTGGCGCATGATCTTAGCCTACTTGCACCTTCCCGACCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000541607.1
CDS GCA 72 bp TTGGGATGGCGGCACTCGGTGCAACCCAGACACAGCTaGCGCCAGCGGGTGCTGTCGAGACTGAGGATCAGT +
Preference number: 6 (lower is better)
Translates to: LGWRHSVQPRHS*RQRVLSRLRIS
Trigger: ACTGATCCTCAGTCTCGACAGCACCCGCTGGCGGCAGCTGTGTCTGGGTTGCACCGAGTGCCGCCATCCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000541607.1
CDS GCA 72 bp CTTCATCCTCACCGCTGGGACTCAGGCCTCCATCGCTaGTGTCCGGGGTCTGGGCCACCCTTTCACCATCAC +
Preference number: 6 (lower is better)
Translates to: LHPHRWDSGLHR*CPGSGPPFHHH
Trigger: GTGATGGTGAAAGGGTGGCCCAGACCCCGGACAGCAGCGATGGAGGCCTGAGTCCCAGCGGTGAGGATGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 72 bp TCAGGCTCCACATCTGGCTGGTTGGGCCAATTGGGATaGCGGCACTCGGTGCAACCCAGACACAGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: SGSTSGWLGQLG*RHSVQPRHSCR
Trigger: GCGGCAGCTGTGTCTGGGTTGCACCGAGTGCCGCCATCCCAATTGGCCCAACCAGCCAGATGTGGAGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000541607.1
CDS CCA 72 bp TGGGCTGCCGAGGGACGTCTGAGAGAATTTTCAAGGTaGGGCCGTGCTGGTGGGTTCACCAGGCGCCACGTA +
Preference number: 6 (lower is better)
Translates to: WAAEGRLREFSR*GRAGGFTRRHV
Trigger: TACGTGGCGCCTGGTGAACCCACCAGCACGGCCCCACCTTGAAAATTCTCTCAGACGTCCCTCGGCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS GCA 72 bp CGGGCTGTGATCCTCGTTGCCATGGCTGTCACCTTCTaGCCATTGTGGGCTGCCGAGGGACGTCTGAGAGAA +
Preference number: 6 (lower is better)
Translates to: RAVILVAMAVTF*PLWAAEGRLRE
Trigger: TTCTCTCAGACGTCCCTCGGCAGCCCACAATGGGCAGAAGGTGACAGCCATGGCAACGAGGATCACAGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS GCA 72 bp GTGGTAACCACCTTCCACCCGGGCTGTGATCCTCGTTaGCATGGCTGTCACCTTCTGCCCATTGTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: VVTTFHPGCDPR*HGCHLLPIVGC
Trigger: GCAGCCCACAATGGGCAGAAGGTGACAGCCATGGCAACGAGGATCACAGCCCGGGTGGAAGGTGGTTACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS CCA 72 bp TGCACAGGCGTGTGGTTGAGCAGTGCTGATCAATGCTaGCCAGCAGGGCCACTTCACCCAACTTCCCCTGCC +
Preference number: 6 (lower is better)
Translates to: CTGVWLSSADQC*PAGPLHPTSPA
Trigger: GGCAGGGGAAGTTGGGTGAAGTGGCCCTGCTGGCCAGCATTGATCAGCACTGCTCAACCACACGCCTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 72 bp GCAGCTCCTGCTGCAGTGAGTTCAGCACTAGGCAGCTaGGCAGCTGAATGGATGCTCCTGGTAGAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: AAPAAVSSALGS*AAEWMLLVEVG
Trigger: GCCCACCTCTACCAGGAGCATCCATTCAGCTGCCCAGCTGCCTAGTGCTGAACTCACTGCAGCAGGAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 72 bp TTCCGGAAGATGTTTCCTTCCATCTTGGCTCTGCCGTaGGAGCAGACGAAGACGCCTCCCTTCCCGTCCCGG +
Preference number: 6 (lower is better)
Translates to: FRKMFPSILALP*EQTKTPPFPSR
Trigger: CCGGGACGGGAAGGGAGGCGTCTTCGTCTGCTCCCACGGCAGAGCCAAGATGGAAGGAAACATCTTCCGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CAA 90 bp ACCCGGGCTGTGATCCTCGTTGCCATGGCTGTCACCTTCTGCCCATaGTGGGCTGCCGAGGGACGTCTGAGAGAATTTTCAAGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: TRAVILVAMAVTFCP*WAAEGRLREFSRWG
Trigger: GCCCCACCTTGAAAATTCTCTCAGACGTCCCTCGGCAGCCCACAATGGGCAGAAGGTGACAGCCATGGCAACGAGGATCACAGCCCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS TCA 72 bp TCACCTTCTGCCCATTGTGGGCTGCCGAGGGACGTCTaGGAGAATTTTCAAGGTGGGGCCGTGCTGGTGGGT +
Preference number: 6 (lower is better)
Translates to: SPSAHCGLPRDV*ENFQGGAVLVG
Trigger: ACCCACCAGCACGGCCCCACCTTGAAAATTCTCTCAGACGTCCCTCGGCAGCCCACAATGGGCAGAAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS TCA 72 bp TGCGGTTGCTGTGGTAACCACCTTCCACCCGGGCTGTaGTCCTCGTTGCCATGGCTGTCACCTTCTGCCCAT +
Preference number: 6 (lower is better)
Translates to: CGCCGNHLPPGL*SSLPWLSPSAH
Trigger: ATGGGCAGAAGGTGACAGCCATGGCAACGAGGATCACAGCCCGGGTGGAAGGTGGTTACCACAGCAACCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS GCA 72 bp CAGGTCTGTGTCCTCACAGGATGGTGCAGAAGACACTaGGGTTGCTGTGGTAACCACCTTCCACCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: QVCVLTGWCRRH*GCCGNHLPPGL
Trigger: CAGCCCGGGTGGAAGGTGGTTACCACAGCAACCGCAGTGTCTTCTGCACCATCCTGTGAGGACACAGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS CCA 72 bp AAGACTCAGGCTCCACATCTGGCTGGTTGGGCCAATTaGGATGGCGGCACTCGGTGCAACCCAGACACAGCT +
Preference number: 6 (lower is better)
Translates to: KTQAPHLAGWAN*DGGTRCNPDTA
Trigger: AGCTGTGTCTGGGTTGCACCGAGTGCCGCCATCCCAATTGGCCCAACCAGCCAGATGTGGAGCCTGAGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000541607.1
CDS CAA 72 bp CCGTTCTCATTCACTGCTATGCCGGCAGCACGGCCCTaGAAGATGTGGTTCCCGCTCACAACGGGGTTTCCG +
Preference number: 6 (lower is better)
Translates to: PFSFTAMPAARP*KMWFPLTTGFP
Trigger: CGGAAACCCCGTTGTGAGCGGGAACCACATCTTCAAGGGCCGTGCTGCCGGCATAGCAGTGAATGAGAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432825.7
ENST00000543968.5
CDS TCA 72 bp AAGACGAGGTTGCACAGGCGTGTGGTTGAGCAGTGCTaGTCAATGCTGGCCAGCAGGGCCACTTCACCCAAC +
Preference number: 6 (lower is better)
Translates to: KTRLHRRVVEQC*SMLASRATSPN
Trigger: GTTGGGTGAAGTGGCCCTGCTGGCCAGCATTGATCAGCACTGCTCAACCACACGCCTGTGCAACCTCGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS TCA 72 bp CGTTCTCATTCACTGCTATGCCGGCAGCACGGCCCTTaGAGATGTGGTTCCCGCTCACAACGGGGTTTCCGT +
Preference number: 6 (lower is better)
Translates to: RSHSLLCRQHGP*RCGSRSQRGFR
Trigger: ACGGAAACCCCGTTGTGAGCGGGAACCACATCTTCAAGGGCCGTGCTGCCGGCATAGCAGTGAATGAGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432825.7
ENST00000543968.5
CDS GCA 72 bp TCAGGTTCCGGAAGATGTTTCCTTCCATCTTGGCTCTaGCGTGGGAGCAGACGAAGACGCCTCCCTTCCCGT +
Preference number: 6 (lower is better)
Translates to: SGSGRCFLPSWL*RGSRRRRLPSR
Trigger: ACGGGAAGGGAGGCGTCTTCGTCTGCTCCCACGGCAGAGCCAAGATGGAAGGAAACATCTTCCGGAACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS GCA 72 bp CGAGGGACGTCTGAGAGAATTTTCAAGGTGGGGCCGTaGTGGTGGGTTCACCAGGCGCCACGTATCAGACTT +
Preference number: 6 (lower is better)
Translates to: RGTSERIFKVGP*WWVHQAPRIRL
Trigger: AAGTCTGATACGTGGCGCCTGGTGAACCCACCAGCACGGCCCCACCTTGAAAATTCTCTCAGACGTCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS GCA 72 bp CGTTGCCATGGCTGTCACCTTCTGCCCATTGTGGGCTaGCGAGGGACGTCTGAGAGAATTTTCAAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: RCHGCHLLPIVG*RGTSERIFKVG
Trigger: CCCCACCTTGAAAATTCTCTCAGACGTCCCTCGGCAGCCCACAATGGGCAGAAGGTGACAGCCATGGCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS CCA 72 bp AAGGCTTCTCTCCAAGACTCAGGCTCCACATCTGGCTaGTTGGGCCAATTGGGATGGCGGCACTCGGTGCAA +
Preference number: 6 (lower is better)
Translates to: KASLQDSGSTSG*LGQLGWRHSVQ
Trigger: TTGCACCGAGTGCCGCCATCCCAATTGGCCCAACCAGCCAGATGTGGAGCCTGAGTCTTGGAGAGAAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 72 bp CTTGAAGGCTTCTCTCCAAGACTCAGGCTCCACATCTaGCTGGTTGGGCCAATTGGGATGGCGGCACTCGGT +
Preference number: 6 (lower is better)
Translates to: LEGFSPRLRLHI*LVGPIGMAALG
Trigger: ACCGAGTGCCGCCATCCCAATTGGCCCAACCAGCCAGATGTGGAGCCTGAGTCTTGGAGAGAAGCCTTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 72 bp GGCTTGGCCCTGAAGCAGGTCTGTGTCCTCACAGGATaGTGCAGAAGACACTGCGGTTGCTGTGGTAACCAC +
Preference number: 6 (lower is better)
Translates to: GLALKQVCVLTG*CRRHCGCCGNH
Trigger: GTGGTTACCACAGCAACCGCAGTGTCTTCTGCACCATCCTGTGAGGACACAGACCTGCTTCAGGGCCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS TCA 72 bp GGGATCCCTCCACGGCGGATGTCCACACCTCCCCACTaGTTCTCACGGATGACATTTTCTGTGATGAGGCCT +
Preference number: 6 (lower is better)
Translates to: GIPPRRMSTPPH*FSRMTFSVMRP
Trigger: AGGCCTCATCACAGAAAATGTCATCCGTGAGAATCAGTGGGGAGGTGTGGACATCCGCCGTGGAGGGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432825.7
ENST00000543968.5
ENST00000544208.1
CDS CAA 90 bp TCAGGCAGTATTTCCACCTTAGCTCCTCTGAGCACCCATCCAGGCTaGGCCCTGAAGCAGGTCTGTGTCCTCACAGGATGGTGCAGAAGA +
Preference number: 6 (lower is better)
Translates to: SGSISTLAPLSTHPG*ALKQVCVLTGWCRR
Trigger: TCTTCTGCACCATCCTGTGAGGACACAGACCTGCTTCAGGGCCAAGCCTGGATGGGTGCTCAGAGGAGCTAAGGTGGAAATACTGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS TCA 72 bp AATCAAGCCACCGCCCTCCAAGCGAAGAAAGATGCCTaGCGCTCGGCAGCGGTAAATGTCGTTCCTGAGCAT +
Preference number: 6 (lower is better)
Translates to: NQATALQAKKDA*RSAAVNVVPEH
Trigger: ATGCTCAGGAACGACATTTACCGCTGCCGAGCGTCAGGCATCTTTCTTCGCTTGGAGGGCGGTGGCTTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000543968.5
CDS GCA 72 bp TTGGCCCTGAAGCAGGTCTGTGTCCTCACAGGATGGTaGAGAAGACACTGCGGTTGCTGTGGTAACCACCTT +
Preference number: 6 (lower is better)
Translates to: LALKQVCVLTGW*RRHCGCCGNHL
Trigger: AAGGTGGTTACCACAGCAACCGCAGTGTCTTCTGCACCATCCTGTGAGGACACAGACCTGCTTCAGGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS CCA 72 bp ATCCTCGTTGCCATGGCTGTCACCTTCTGCCCATTGTaGGCTGCCGAGGGACGTCTGAGAGAATTTTCAAGG +
Preference number: 6 (lower is better)
Translates to: ILVAMAVTFCPL*AAEGRLREFSR
Trigger: CCTTGAAAATTCTCTCAGACGTCCCTCGGCAGCCCACAATGGGCAGAAGGTGACAGCCATGGCAACGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS CAA 72 bp GTGATCCTCGTTGCCATGGCTGTCACCTTCTGCCCATaGTGGGCTGCCGAGGGACGTCTGAGAGAATTTTCA +
Preference number: 6 (lower is better)
Translates to: VILVAMAVTFCP*WAAEGRLREFS
Trigger: TGAAAATTCTCTCAGACGTCCCTCGGCAGCCCACAATGGGCAGAAGGTGACAGCCATGGCAACGAGGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432825.7
CDS GCA 72 bp CCGGGCCATGGACCTGGATGTGCCCGTTCTCAAAGTTaGAGTTGTCAAACTGGACGTGACCTGATGTTGTCT +
Preference number: 6 (lower is better)
Translates to: PGHGPGCARSQS*SCQTGRDLMLS
Trigger: AGACAACATCAGGTCACGTCCAGTTTGACAACTGCAACTTTGAGAACGGGCACATCCAGGTCCATGGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS GCA 72 bp TTCACTTGGCAAGTACCCGGGCCATGGACCTGGATGTaGCCGTTCTCAAAGTTGCAGTTGTCAAACTGGACG +
Preference number: 6 (lower is better)
Translates to: FTWQVPGPWTWM*PFSKLQLSNWT
Trigger: CGTCCAGTTTGACAACTGCAACTTTGAGAACGGGCACATCCAGGTCCATGGCCCGGGTACTTGCCAAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 72 bp CCATTGCCAAGGACGACAATGCCAGAGCGAAGGCCATaGTGGATCTGGTTACACAGTATGAGTGGGTTGGAC +
Preference number: 6 (lower is better)
Translates to: PLPRTTMPERRP*WIWLHSMSGLD
Trigger: GTCCAACCCACTCATACTGTGTAACCAGATCCACCATGGCCTTCGCTCTGGCATTGTCGTCCTTGGCAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000543968.5
CDS GCA 72 bp TGTCTACACCAGCCTCTGCATTGTGGTAAATGTTGTTaGCGGCAATCAAGCCACCGCCCTCCAAGCGAAGAA +
Preference number: 6 (lower is better)
Translates to: CLHQPLHCGKCC*RQSSHRPPSEE
Trigger: TTCTTCGCTTGGAGGGCGGTGGCTTGATTGCCGGCAACAACATTTACCACAATGCAGAGGCTGGTGTAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000543968.5
CDS CCA 72 bp GTCGTTCCCTCCTCCGGCGGAATAGAGAAAAGCAGATaGAAGACTCCAAGTCCAAGGCATTCTTGGTCCATG +
Preference number: 6 (lower is better)
Translates to: VVPSSGGIEKSR*KTPSPRHSWSM
Trigger: CATGGACCAAGAATGCCTTGGACTTGGAGTCTTCCATCTGCTTTTCTCTATTCCGCCGGAGGAGGGAACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 72 bp CAGAACTTCACTTGGCAAGTACCCGGGCCATGGACCTaGATGTGCCCGTTCTCAAAGTTGCAGTTGTCAAAC +
Preference number: 6 (lower is better)
Translates to: QNFTWQVPGPWT*MCPFSKLQLSN
Trigger: GTTTGACAACTGCAACTTTGAGAACGGGCACATCCAGGTCCATGGCCCGGGTACTTGCCAAGTGAAGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 72 bp TCGATAACAATGTCACAGGTCTTTGGGCTCCAGGCCTaGTCCCGGCTCTCTAGGTCCAGGGACATTAAAAAG +
Preference number: 6 (lower is better)
Translates to: SITMSQVFGLQA*SRLSRSRDIKK
Trigger: CTTTTTAATGTCCCTGGACCTAGAGAGCCGGGACCAGGCCTGGAGCCCAAAGACCTGTGACATTGTTATCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CAA 90 bp CCCCTGCCCTACAATCTCCACAGGCACCTTCAAGATGATTTCACCTaGCTCTTCGTACACACCTGGGAAGAGCACAATTCGGTCATACAG +
Preference number: 6 (lower is better)
Translates to: PLPYNLHRHLQDDFT*LFVHTWEEHNSVIQ
Trigger: CTGTATGACCGAATTGTGCTCTTCCCAGGTGTGTACGAAGAGCAAGGTGAAATCATCTTGAAGGTGCCTGTGGAGATTGTAGGGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS TCA 72 bp ACAGGGGCACGTTGTGCAGGAAGATATGGGTGTTTTTaGAGGTACAGAACTTCACTTGGCAAGTACCCGGGC +
Preference number: 6 (lower is better)
Translates to: TGARCAGRYGCF*RYRTSLGKYPG
Trigger: GCCCGGGTACTTGCCAAGTGAAGTTCTGTACCTTCAAAAACACCCATATCTTCCTGCACAACGTGCCCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS GCA 72 bp ATTTTCTGTGATGAGGCCTTTGCCGTTCTCATTCACTaGTATGCCGGCAGCACGGCCCTTGAAGATGTGGTT +
Preference number: 6 (lower is better)
Translates to: IFCDEAFAVLIH*YAGSTALEDVV
Trigger: AACCACATCTTCAAGGGCCGTGCTGCCGGCATAGCAGTGAATGAGAACGGCAAAGGCCTCATCACAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432825.7
ENST00000543968.5
CDS CCA 72 bp AAGATATGGGTGTTTTTGAAGGTACAGAACTTCACTTaGCAAGTACCCGGGCCATGGACCTGGATGTGCCCG +
Preference number: 6 (lower is better)
Translates to: KIWVFLKVQNFT*QVPGPWTWMCP
Trigger: CGGGCACATCCAGGTCCATGGCCCGGGTACTTGCCAAGTGAAGTTCTGTACCTTCAAAAACACCCATATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 72 bp TTGCCAAGGACGACAATGCCAGAGCGAAGGCCATGGTaGATCTGGTTACACAGTATGAGTGGGTTGGACTTT +
Preference number: 6 (lower is better)
Translates to: LPRTTMPERRPW*IWLHSMSGLDF
Trigger: AAAGTCCAACCCACTCATACTGTGTAACCAGATCCACCATGGCCTTCGCTCTGGCATTGTCGTCCTTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000543968.5
CDS CAA 72 bp GAAGATATGGGTGTTTTTGAAGGTACAGAACTTCACTaGGCAAGTACCCGGGCCATGGACCTGGATGTGCCC +
Preference number: 6 (lower is better)
Translates to: EDMGVFEGTELH*ASTRAMDLDVP
Trigger: GGGCACATCCAGGTCCATGGCCCGGGTACTTGCCAAGTGAAGTTCTGTACCTTCAAAAACACCCATATCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CAA 90 bp GTTGTGCAGGAAGATATGGGTGTTTTTGAAGGTACAGAACTTCACTaGGCAAGTACCCGGGCCATGGACCTGGATGTGCCCGTTCTCAAA +
Preference number: 6 (lower is better)
Translates to: VVQEDMGVFEGTELH*ASTRAMDLDVPVLK
Trigger: TTTGAGAACGGGCACATCCAGGTCCATGGCCCGGGTACTTGCCAAGTGAAGTTCTGTACCTTCAAAAACACCCATATCTTCCTGCACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS TCA 72 bp TCTTGGTCCATGTCTTGGATGCAAGGTAATGCTGCTTaGAGGCTTCTCTCCAAGACTCAGGCTCCACATCTG +
Preference number: 6 (lower is better)
Translates to: SWSMSWMQGNAA*RLLSKTQAPHL
Trigger: CAGATGTGGAGCCTGAGTCTTGGAGAGAAGCCTTCAAGCAGCATTACCTTGCATCCAAGACATGGACCAAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS GCA 72 bp TGGGTTGGACTTTTTCCGGATGTCTACACCAGCCTCTaGATTGTGGTAAATGTTGTTGCCGGCAATCAAGCC +
Preference number: 6 (lower is better)
Translates to: WVGLFPDVYTSL*IVVNVVAGNQA
Trigger: GGCTTGATTGCCGGCAACAACATTTACCACAATGCAGAGGCTGGTGTAGACATCCGGAAAAAGTCCAACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000543968.5
CDS GCA 72 bp CTCCAAGTCCAAGGCATTCTTGGTCCATGTCTTGGATaGAAGGTAATGCTGCTTGAAGGCTTCTCTCCAAGA +
Preference number: 6 (lower is better)
Translates to: LQVQGILGPCLG*KVMLLEGFSPR
Trigger: TCTTGGAGAGAAGCCTTCAAGCAGCATTACCTTGCATCCAAGACATGGACCAAGAATGCCTTGGACTTGGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS GCA 72 bp ACAATCTCCACAGGCACCTTCAAGATGATTTCACCTTaGTCTTCGTACACACCTGGGAAGAGCACAATTCGG +
Preference number: 6 (lower is better)
Translates to: TISTGTFKMISP*SSYTPGKSTIR
Trigger: CCGAATTGTGCTCTTCCCAGGTGTGTACGAAGAGCAAGGTGAAATCATCTTGAAGGTGCCTGTGGAGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS GCA 72 bp ATGGGTGACCCTCAACAGTCACAGAGTTGTTTTCACTaGCCACAAATTCACAGTTTTCCAGGACACACAGGG +
Preference number: 6 (lower is better)
Translates to: MGDPQQSQSCFH*PQIHSFPGHTG
Trigger: CCCTGTGTGTCCTGGAAAACTGTGAATTTGTGGGCAGTGAAAACAACTCTGTGACTGTTGAGGGTCACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CCA 72 bp TCCAGGACACACAGGGGCACGTTGTGCAGGAAGATATaGGTGTTTTTGAAGGTACAGAACTTCACTTGGCAA +
Preference number: 6 (lower is better)
Translates to: SRTHRGTLCRKI*VFLKVQNFTWQ
Trigger: TTGCCAAGTGAAGTTCTGTACCTTCAAAAACACCCATATCTTCCTGCACAACGTGCCCCTGTGTGTCCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS TCA 72 bp CAGCCTCCTTATTGGAAAAGATTTGATTGTTCCGGATaGTGCCTTTCCCATTGCCAAGGACGACAATGCCAG +
Preference number: 6 (lower is better)
Translates to: QPPYWKRFDCSG*CLSHCQGRQCQ
Trigger: CTGGCATTGTCGTCCTTGGCAATGGGAAAGGCATCATCCGGAACAATCAAATCTTTTCCAATAAGGAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000543968.5
CDS GCA 72 bp AGAGTCCAGACAGATGAAGGCTCTGCCCAAAGTCACTaGGTGAGTGAGAAGAGTTTTCTTCCTGTGATTATC +
Preference number: 6 (lower is better)
Translates to: RVQTDEGSAQSH*VSEKSFLPVII
Trigger: GATAATCACAGGAAGAAAACTCTTCTCACTCACGCAGTGACTTTGGGCAGAGCCTTCATCTGTCTGGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544208.1
CDS CAA 72 bp TACAATCTCCACAGGCACCTTCAAGATGATTTCACCTaGCTCTTCGTACACACCTGGGAAGAGCACAATTCG +
Preference number: 6 (lower is better)
Translates to: YNLHRHLQDDFT*LFVHTWEEHNS
Trigger: CGAATTGTGCTCTTCCCAGGTGTGTACGAAGAGCAAGGTGAAATCATCTTGAAGGTGCCTGTGGAGATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CAA 90 bp TCCGTGGTACAGGATGTAAATGCCAGCCTCCTTATTGGAAAAGATTaGATTGTTCCGGATGATGCCTTTCCCATTGCCAAGGACGACAAT +
Preference number: 6 (lower is better)
Translates to: SVVQDVNASLLIGKD*IVPDDAFPIAKDDN
Trigger: ATTGTCGTCCTTGGCAATGGGAAAGGCATCATCCGGAACAATCAAATCTTTTCCAATAAGGAGGCTGGCATTTACATCCTGTACCACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000543968.5
CDS TCA 72 bp TGCCCGTTCTCAAAGTTGCAGTTGTCAAACTGGACGTaGCCTGATGTTGTCTTATACATGATGGGTGAGAAC +
Preference number: 6 (lower is better)
Translates to: CPFSKLQLSNWT*PDVVLYMMGEN
Trigger: GTTCTCACCCATCATGTATAAGACAACATCAGGTCACGTCCAGTTTGACAACTGCAACTTTGAGAACGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS GCA 72 bp GAGCATGATGATCTTGCTATTATGTATACACCGCACTaGGTAAGTCAGGTTCCGGAAGATGTTTCCTTCCAT +
Preference number: 6 (lower is better)
Translates to: EHDDLAIMYTPH*VSQVPEDVSFH
Trigger: ATGGAAGGAAACATCTTCCGGAACCTGACTTACGCAGTGCGGTGTATACATAATAGCAAGATCATCATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276960.7
ENST00000432825.7
CDS CAA 72 bp CAGGATGTAAATGCCAGCCTCCTTATTGGAAAAGATTaGATTGTTCCGGATGATGCCTTTCCCATTGCCAAG +
Preference number: 6 (lower is better)
Translates to: QDVNASLLIGKD*IVPDDAFPIAK
Trigger: CTTGGCAATGGGAAAGGCATCATCCGGAACAATCAAATCTTTTCCAATAAGGAGGCTGGCATTTACATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276960.7
ENST00000432825.7
ENST00000543968.5
CDS CAA 72 bp CGCCACGTATCAGACTTTTTCTTGAAGACCAGGAACTaGTTGTTTTGCATGATGCATTCTCGGTTGTTTGAG +
Preference number: 6 (lower is better)
Translates to: RHVSDFFLKTRN*LFCMMHSRLFE
Trigger: CTCAAACAACCGAGAATGCATCATGCAAAACAACAAGTTCCTGGTCTTCAAGAAAAAGTCTGATACGTGGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432825.7