RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXL7 (Homo sapiens)

Ensembl gene IDs: ENSG00000183580

Ensembl transcript IDs: ENST00000329673.8, ENST00000504595.2, ENST00000510662.1

Found 577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCAGCCCAGAGCAGTGAAGTGCTTTGGCCAAGGTCATAGTCATTaGCAGAGCTGGGGGAGGACTGCATGTCCTTCCCCAGCTGTTTGC +
Preference number: 1 (lower is better)
Translates to: LQPRAVKCFGQGHSH*QSWGRTACPSPAVC
Trigger: GCAAACAGCTGGGGAAGGACATGCAGTCCTCCCCCAGCTCTGTCAATGACTATGACCTTGGCCAAAGCACTTCACTGCTCTGGGCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 90 bp GACAAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTaGCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACT +
Preference number: 1 (lower is better)
Translates to: DKEPRHLSLPAVGQM*LMHARCARRGIRKT
Trigger: AGTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 90 bp GGACATGAAGCTAATCTTTGGGCTGTGTGGCCTCTGATTCAGTGCTaGAAGCTGCAGCCCAGAGCAGTGAAGTGCTTTGGCCAAGGTCAT +
Preference number: 1 (lower is better)
Translates to: GHEANLWAVWPLIQC*KLQPRAVKCFGQGH
Trigger: ATGACCTTGGCCAAAGCACTTCACTGCTCTGGGCTGCAGCTTCCAGCACTGAATCAGAGGCCACACAGCCCAAAGATTAGCTTCATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 90 bp AATGGACATGAAGCTAATCTTTGGGCTGTGTGGCCTCTGATTCAGTaGTGGAAGCTGCAGCCCAGAGCAGTGAAGTGCTTTGGCCAAGGT +
Preference number: 1 (lower is better)
Translates to: NGHEANLWAVWPLIQ*WKLQPRAVKCFGQG
Trigger: ACCTTGGCCAAAGCACTTCACTGCTCTGGGCTGCAGCTTCCAGCACTGAATCAGAGGCCACACAGCCCAAAGATTAGCTTCATGTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 90 bp CACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATaGCAAGGTGCTTCTGTGTATGGGTATCTCTGCTCCCTCAATGCT +
Preference number: 1 (lower is better)
Translates to: HRISSPGRGRCLGAL*QGASVYGYLCSLNA
Trigger: AGCATTGAGGGAGCAGAGATACCCATACACAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 90 bp ATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTaGTCTATGCCAAGGTGCTTCTGTGTATGGGTATCTCTGCTCCCT +
Preference number: 1 (lower is better)
Translates to: IHPQNQFSWKRSMPG*SMPRCFCVWVSLLP
Trigger: AGGGAGCAGAGATACCCATACACAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR TCA 90 bp CTGGCAAAAGAGGATGTGAGGAGGTGGGAGAGGAAATTCTCCCACTaGAACACAGGGAAGTGGGTGATTTGCAGCCAAAGGACATACAGG +
Preference number: 1 (lower is better)
Translates to: LAKEDVRRWERKFSH*NTGKWVICSQRTYR
Trigger: CCTGTATGTCCTTTGGCTGCAAATCACCCACTTCCCTGTGTTTCAGTGGGAGAATTTCCTCTCCCACCTCCTCACATCCTCTTTTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 90 bp CAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTaGTTCTGTGTATGGGTATCTCTGCTCCCTCAATGCTATAATGGA +
Preference number: 1 (lower is better)
Translates to: QFSWKRSMPGCSMPR*FCVWVSLLPQCYNG
Trigger: TCCATTATAGCATTGAGGGAGCAGAGATACCCATACACAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 90 bp CTCCCTCAATGCTATAATGGACATGAAGCTAATCTTTGGGCTGTGTaGCCTCTGATTCAGTGCTGGAAGCTGCAGCCCAGAGCAGTGAAG +
Preference number: 1 (lower is better)
Translates to: LPQCYNGHEANLWAV*PLIQCWKLQPRAVK
Trigger: CTTCACTGCTCTGGGCTGCAGCTTCCAGCACTGAATCAGAGGCCACACAGCCCAAAGATTAGCTTCATGTCCATTATAGCATTGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 90 bp TCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTaGGTGCTCTATGCCAAGGTGCTTCTGTGTATGGGTATCTCTGCT +
Preference number: 1 (lower is better)
Translates to: SHPSTESVLLEEVDA*VLYAKVLLCMGISA
Trigger: AGCAGAGATACCCATACACAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 90 bp GTATCTCTGCTCCCTCAATGCTATAATGGACATGAAGCTAATCTTTaGGCTGTGTGGCCTCTGATTCAGTGCTGGAAGCTGCAGCCCAGA +
Preference number: 1 (lower is better)
Translates to: VSLLPQCYNGHEANL*AVWPLIQCWKLQPR
Trigger: TCTGGGCTGCAGCTTCCAGCACTGAATCAGAGGCCACACAGCCCAAAGATTAGCTTCATGTCCATTATAGCATTGAGGGAGCAGAGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR TCA 90 bp CTCACTCGGAAGACCCCAGGGCCAAGGATTAGGGACAATCCTTTGTaGCACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGA +
Preference number: 1 (lower is better)
Translates to: LTRKTPGPRIRDNPL*HPNPETSNRVTSHR
Trigger: TCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACAAAGGATTGTCCCTAATCCTTGGCCCTGGGGTCTTCCGAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 90 bp AGGGAAGTGGGTGATTTGCAGCCAAAGGACATACAGGACCCTTTATaGACTGATGCTGGCACTGCACAATCTCCTGAAATCACATCCATC +
Preference number: 1 (lower is better)
Translates to: REVGDLQPKDIQDPL*TDAGTAQSPEITSI
Trigger: GATGGATGTGATTTCAGGAGATTGTGCAGTGCCAGCATCAGTGCATAAAGGGTCCTGTATGTCCTTTGGCTGCAAATCACCCACTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 90 bp TCTATGCCAAGGTGCTTCTGTGTATGGGTATCTCTGCTCCCTCAATaGTATAATGGACATGAAGCTAATCTTTGGGCTGTGTGGCCTCTG +
Preference number: 1 (lower is better)
Translates to: SMPRCFCVWVSLLPQ*YNGHEANLWAVWPL
Trigger: CAGAGGCCACACAGCCCAAAGATTAGCTTCATGTCCATTATAGCATTGAGGGAGCAGAGATACCCATACACAGAAGCACCTTGGCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR TCA 90 bp AGTGTGAACAGTCAGCTTTGTCTCATGTTTGGAAGACAGTTTAGGTaGTGCGGTCAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTC +
Preference number: 1 (lower is better)
Translates to: SVNSQLCLMFGRQFR*CGQGFILWISLLIL
Trigger: GAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGAGACAAAGCTGACTGTTCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR TCA 90 bp AAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTTAGGTCAATaGAGCAGTTTAGAGAGGAGGTCTGGAGAGCACTGTGATTCTGAT +
Preference number: 1 (lower is better)
Translates to: KNVHGCGIEESDLGQ*SSLERRSGEHCDSD
Trigger: ATCAGAATCACAGTGCTCTCCAGACCTCCTCTCTAAACTGCTTCATTGACCTAAGTCACTCTCTTCAATCCCACACCCATGGACATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 90 bp GGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATaGAGGAGGTACACAGGGTGGCAATTTGCACAATTAAACACTTAC +
Preference number: 1 (lower is better)
Translates to: GSLLCILWWKTRRQT*RRYTGWQFAQLNTY
Trigger: GTAAGTGTTTAATTGTGCAAATTGCCACCCTGTGTACCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 90 bp GCACAGAGCCTTGATTACACATGTAATTTGATGATGTTGATTGGATaGGAGGCCATGATGTTTGAAAGAAACCTCCTGGGCAGACACCAC +
Preference number: 1 (lower is better)
Translates to: AQSLDYTCNLMMLIG*EAMMFERNLLGRHH
Trigger: GTGGTGTCTGCCCAGGAGGTTTCTTTCAAACATCATGGCCTCCCATCCAATCAACATCATCAAATTACATGTGTAATCAAGGCTCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 90 bp CTTTGGTGGAAAACACGCAGACAGACATGGAGGAGGTACACAGGGTaGCAATTTGCACAATTAAACACTTACAAACTTAACCCCAATAGG +
Preference number: 1 (lower is better)
Translates to: LWWKTRRQTWRRYTG*QFAQLNTYKLNPNR
Trigger: CCTATTGGGGTTAAGTTTGTAAGTGTTTAATTGTGCAAATTGCCACCCTGTGTACCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR TCA 90 bp GTCATCTCAGTGTGTTCCCTCTTCCATTCATCTGGCATTGTTGAGTaGACAGAATTTAAACACCTGGAAGTCTGCTTTGCATTCTTTGGT +
Preference number: 1 (lower is better)
Translates to: VISVCSLFHSSGIVE*TEFKHLEVCFAFFG
Trigger: ACCAAAGAATGCAAAGCAGACTTCCAGGTGTTTAAATTCTGTTCACTCAACAATGCCAGATGAATGGAAGAGGGAACACACTGAGATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 90 bp TCTTCCATTCATCTGGCATTGTTGAGTGAACAGAATTTAAACACCTaGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGAC +
Preference number: 1 (lower is better)
Translates to: SSIHLALLSEQNLNT*KSALHSLVENTQTD
Trigger: GTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGTGTTTAAATTCTGTTCACTCAACAATGCCAGATGAATGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 90 bp CAAAAGACAAGTGAATTTCGTGAAAACCAGCAATGGAATTTCTTCTaGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTCTA +
Preference number: 1 (lower is better)
Translates to: QKTSEFRENQQWNFF*LSDFMQMRLEYRLL
Trigger: TAGAAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCATTGCTGGTTTTCACGAAATTCACTTGTCTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGGCGGCCTTGGGGGCCTaGGCGGAGGAGAGTAAGCGC +
Preference number: 2 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLAALGA*AEESKR
Trigger: GCGCTTACTCTCCTCCGCTCAGGCCCCCAAGGCCGC...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGGGGAAAGGGCGGCCTTaGGGGCCTGAGCGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: ESTVILMMDPRCCSREGGGKGRP*GPERRR
Trigger: TCTCCTCCGCTCAGGCCCCCAAGGCCGCCCTTTCCC...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 90 bp GGGAAAGGGCGGCCTTGGGGGCCTGAGCGGAGGAGAGTAAGCGCCTaGCTCAAGGAACAGCGATCAGCCTGCTTAAGTACATCTTTTGTG +
Preference number: 2 (lower is better)
Translates to: GKGRPWGPERRRVSA*LKEQRSACLSTSFV
Trigger: CACAAAAGATGTACTTAAGCAGGCTGATCGCTGTTCCTTGAGCAAGGCGCTTACTCTCCTCCGCTCAGGCCCCCAAGGCCGCCCTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGGAAGAGGTCGATGCCTaGGTGCTCTATGCCAAGGTG +
Preference number: 2 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGEEVDA*VLYAKV
Trigger: CACCTTGGCATAGAGCACCCAGGCATCGACCTCTTC...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGGGACCCTTTATGCACTaGTGCTGGCACTGCACAATC +
Preference number: 2 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGGPFMH*CWHCTI
Trigger: GATTGTGCAGTGCCAGCATCAGTGCATAAAGGGTCC...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGACACAGGGAAGTGGGTaGTTTGCAGCCAAAGGACAT +
Preference number: 2 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGTQGSG*FAAKGH
Trigger: ATGTCCTTTGGCTGCAAATCACCCACTTCCCTGTGT...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGCCCAGAGCAGTGAAGTaGTTTGGCCAAGGTCATAGT +
Preference number: 2 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGPRAVK*FGQGHS
Trigger: ACTATGACCTTGGCCAAAGCACTTCACTGCTCTGGG...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATGGGCTGTGTGGCCTCTaGTTCAGTGCTGGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: LARRYVLGNQCEQSALSHGLCGL*FSAGSC
Trigger: GCAGCTTCCAGCACTGAATCAGAGGCCACACAGCCC...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTAATGATGGATCCTCGCTaGTGCTCTAGGGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: TSIHRISSPGRGRCLGALMMDPR*CSREGG
Trigger: CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCAT...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGGGCTGTGTGGCCTCTaGTTCAGTGCTGGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: TWKSALHSLVENTQTDMEGLCGL*FSAGSC
Trigger: GCAGCTTCCAGCACTGAATCAGAGGCCACACAGCCC...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATAGGTCGATGCCTGGGTaGTCTATGCCAAGGTGCTTC +
Preference number: 2 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHRSMPG*SMPRCF
Trigger: GAAGCACCTTGGCATAGAGCACCCAGGCATCGACCT...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp AGGACAGATGTGCCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACCAGAATCAGTTCTCCTaGAAGAGGTCGATGCCTGGG +
Preference number: 2 (lower is better)
Translates to: RTDVPDACQVCKARDQKNQNQFS*KRSMPG
Trigger: CCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTG...GTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGGTTTGCTGTTTGTCTTaGTTCGTTTCTTTGGCCTCT +
Preference number: 2 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGVCCLS*FVSLAS
Trigger: AGAGGCCAAAGAAACGAAGCAAGACAAACAGCAAAC...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGCCTGGAAGAGGTCGATaGCTGGGTGCTCTATGCCAA +
Preference number: 2 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLPGRGR*LGALCQ
Trigger: TTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGG...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp AGGACAGATGTGCCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACGGGAAGTGGGTGATTTaGAGCCAAAGGACATACAGG +
Preference number: 2 (lower is better)
Translates to: RTDVPDACQVCKARDQKNGKWVI*SQRTYR
Trigger: CCTGTATGTCCTTTGGCTGCAAATCACCCACTTCCC...GTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGAAGAGCTGTTTTGAGTaGGTGTCGGTGCTTACATAC +
Preference number: 2 (lower is better)
Translates to: ESTVILMMDPRCCSREGGKSCFE*VSVLTY
Trigger: GTATGTAAGCACCGACACCCACTCAAAACAGCTCTT...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTCCTCTGATTCAGTGCTaGAAGCTGCAGCCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: EITSIHRISSPGRGRCLGPLIQC*KLQPRA
Trigger: TGCTCTGGGCTGCAGCTTCCAGCACTGAATCAGAGG...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATCCTCTGATTCAGTGCTaGAAGCTGCAGCCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: LARRYVLGNQCEQSALSHPLIQC*KLQPRA
Trigger: TGCTCTGGGCTGCAGCTTCCAGCACTGAATCAGAGG...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATGAGGATGTGAGGAGGTaGGAGAGGAAATTCTCCCAC +
Preference number: 2 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHEDVRR*ERKFSH
Trigger: GTGGGAGAATTTCCTCTCCCACCTCCTCACATCCTC...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGAGTGACTTAGGTCAATaGAGCAGTTTAGAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLSDLGQ*SSLERR
Trigger: CCTCCTCTCTAAACTGCTTCATTGACCTAAGTCACT...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGATGGATCCTCGCTGCTaGTCTAGGGAGGGAGGGTGT +
Preference number: 2 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWMDPRC*SREGGC
Trigger: ACACCCTCCCTCCCTAGAGCAGCAGCGAGGATCCAT...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp GGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGAGGAGGAAATTCTCCCACTaGAACACAGGGAAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: GSLLCILWWKTRRQTWRRRKFSH*NTGKWV
Trigger: CACCCACTTCCCTGTGTTTCAGTGGGAGAATTTCCT...CCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGATCTGGGCTTTGCTGTaGTTAGGTGTGCTGGTGCCT +
Preference number: 2 (lower is better)
Translates to: TWKSALHSLVENTQTDMEIWALL*LGVLVP
Trigger: AGGCACCAGCACACCTAATCACAGCAAAGCCCAGAT...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTATGGATCCTCGCTGCTaGTCTAGGGAGGGAGGGTGT +
Preference number: 2 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLMDPRC*SREGGC
Trigger: ACACCCTCCCTCCCTAGAGCAGCAGCGAGGATCCAT...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGTCTCTGCTCCCTCAATaGTATAATGGACATGAAGCT +
Preference number: 2 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLSLLPQ*YNGHEA
Trigger: AGCTTCATGTCCATTATAGCATTGAGGGAGCAGAGA...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGCCTGGAAGAGGTCGATaGCTGGGTGCTCTATGCCAA +
Preference number: 2 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWPGRGR*LGALCQ
Trigger: TTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGG...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAGCTGTAGGACAGATGTaGCTGATGCATGCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRAVGQM*LMHARC
Trigger: ACACCTGGCATGCATCAGGCACATCTGTCCTACAGC...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGCAAGGTCATAGTCATTaGCAGAGCTGGGGGAGGACT +
Preference number: 2 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWQGHSH*QSWGRT
Trigger: AGTCCTCCCCCAGCTCTGTCAATGACTATGACCTTG...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGACACAGGGAAGTGGGTaGTTTGCAGCCAAAGGACAT +
Preference number: 2 (lower is better)
Translates to: TWKSALHSLVENTQTDMETQGSG*FAAKGH
Trigger: ATGTCCTTTGGCTGCAAATCACCCACTTCCCTGTGT...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGATGCCTGGGTGCTCTATaGCAAGGTGCTTCTGTGTAT +
Preference number: 2 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRCLGAL*QGASVY
Trigger: ATACACAGAAGCACCTTGGCATAGAGCACCCAGGCA...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGATACAGGACCCTTTATaGACTGATGCTGGCACTGCA +
Preference number: 2 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLIQDPL*TDAGTA
Trigger: TGCAGTGCCAGCATCAGTGCATAAAGGGTCCTGTAT...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTCTTGCTTCGTTTCTTTaGCCTCTGTTGCCCATGAGA +
Preference number: 2 (lower is better)
Translates to: EITSIHRISSPGRGRCLGLASFL*PLLPMR
Trigger: TCTCATGGGCAACAGAGGCCAAAGAAACGAAGCAAG...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTGAAGAGGTCGATGCCTaGGTGCTCTATGCCAAGGTG +
Preference number: 2 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSEEVDA*VLYAKV
Trigger: CACCTTGGCATAGAGCACCCAGGCATCGACCTCTTC...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGAAGAAAGAGCTGTTTTaGGTGGGTGTCGGTGCTTAC +
Preference number: 2 (lower is better)
Translates to: TWKSALHSLVENTQTDMEKKELF*VGVGAY
Trigger: GTAAGCACCGACACCCACTCAAAACAGCTCTTTCTT...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGTTGAGTGGGTGTCGGTaGTTACATACGCTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLLSGCR*LHTLLL
Trigger: TAAAAGCAGCGTATGTAAGCACCGACACCCACTCAA...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGCCCAGAGCAGTGAAGTaGTTTGGCCAAGGTCATAGT +
Preference number: 2 (lower is better)
Translates to: CDTQILKLQIGSQVTELRPRAVK*FGQGHS
Trigger: ACTATGACCTTGGCCAAAGCACTTCACTGCTCTGGG...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp ATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTTGCCTGGGTGCTCTATaGCAAGGTGCTTCTGTGTAT +
Preference number: 2 (lower is better)
Translates to: IGSQVTELRNAAFNFFHGCLGAL*QGASVY
Trigger: ATACACAGAAGCACCTTGGCATAGAGCACCCAGGCA...ACCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTGATGCATGCCAGGTGTaGAAGGCGAGGGATCAGAAA +
Preference number: 2 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSDACQV*KARDQK
Trigger: TTTCTGATCCCTCGCCTTGCACACCTGGCATGCATC...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp GGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGAGGAAGAGCTGTTTTGAGTaGGTGTCGGTGCTTACATAC +
Preference number: 2 (lower is better)
Translates to: GSLLCILWWKTRRQTWRRKSCFE*VSVLTY
Trigger: GTATGTAAGCACCGACACCCACTCAAAACAGCTCTT...CCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCTCCTTTCCAAGGGTCTaGTTGGTGGACCAGAGTCTA +
Preference number: 2 (lower is better)
Translates to: QGFILWISLLILRVLNQLSFPRV*LVDQSL
Trigger: TAGACTCTGGTCCACCAACCAGACCCTTGGAAAGGA...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 90 bp CACAGAAGACGACAGTATGCACAGGAGCCTACAGTAGGAGTGCAGTaGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTG +
Preference number: 2 (lower is better)
Translates to: HRRRQYAQEPTVGVQ*SRVSKFDKFSITGL
Trigger: CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCCTACTGTAGGCTCCTGTGCATACTGTCGTCTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAGAAACTGCCTACAAATaGCCTGACCAAAATGCCTGT +
Preference number: 2 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRETAYK*PDQNAC
Trigger: ACAGGCATTTTGGTCAGGTCATTTGTAGGCAGTTTC...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATGTTTGCTGTTTGTCTTaGTTCGTTTCTTTGGCCTCT +
Preference number: 2 (lower is better)
Translates to: LARRYVLGNQCEQSALSHVCCLS*FVSLAS
Trigger: AGAGGCCAAAGAAACGAAGCAAGACAAACAGCAAAC...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp GGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGAGGGAACAGCGATCAGCCTaGTTAAGTACATCTTTTGTG +
Preference number: 2 (lower is better)
Translates to: GSLLCILWWKTRRQTWRREQRSA*LSTSFV
Trigger: CACAAAAGATGTACTTAAGCAGGCTGATCGCTGTTC...CCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTCAGAAGACGACAGTATaGACAGGAGCCTACAGTAGG +
Preference number: 2 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLQKTTV*TGAYSR
Trigger: CCTACTGTAGGCTCCTGTGCATACTGTCGTCTTCTG...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGCTTGCTTCGTTTCTTTaGCCTCTGTTGCCCATGAGA +
Preference number: 2 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWLASFL*PLLPMR
Trigger: TCTCATGGGCAACAGAGGCCAAAGAAACGAAGCAAG...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTTGAAAGAAACCTCCTaGGCAGACACCACCTCATCA +
Preference number: 2 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWLKETS*ADTTSS
Trigger: TGATGAGGTGGTGTCTGCCCAGGAGGTTTCTTTCAA...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAGATTCATTTCCCCCATaGCACAGAGCCTTGATTACA +
Preference number: 2 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRDSFPP*HRALIT
Trigger: TGTAATCAAGGCTCTGTGCCATGGGGGAAATGAATC...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 90 bp TTGAGTGAACAGAATTTAAACACCTGGAAGTCTGCTTTGCATTCTTaGGTGGAAAACACGCAGACAGACATGGAGGAGGTACACAGGGTG +
Preference number: 2 (lower is better)
Translates to: LSEQNLNTWKSALHS*VENTQTDMEEVHRV
Trigger: CACCCTGTGTACCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGTGTTTAAATTCTGTTCACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGTGCCTACAAATGACCTaGCCAAAATGCCTGTTTGCT +
Preference number: 2 (lower is better)
Translates to: CDTQILKLQIGSQVTELRCLQMT*PKCLFA
Trigger: AGCAAACAGGCATTTTGGTCAGGTCATTTGTAGGCA...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCGAAACTGCCTACAAATaGCCTGACCAAAATGCCTGT +
Preference number: 2 (lower is better)
Translates to: QGFILWISLLILRVLNQLETAYK*PDQNAC
Trigger: ACAGGCATTTTGGTCAGGTCATTTGTAGGCAGTTTC...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGCACTGCACAATCTCCTaGAATCACATCCATCCACAG +
Preference number: 2 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLHCTIS*NHIHPQ
Trigger: CTGTGGATGGATGTGATTTCAGGAGATTGTGCAGTG...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAGGTCAAATGCAATCTaGATGACAAAGAACCGAGGC +
Preference number: 2 (lower is better)
Translates to: CDTQILKLQIGSQVTELRRSNAI*MTKNRG
Trigger: GCCTCGGTTCTTTGTCATTCAGATTGCATTTGACCT...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTTGGATGGGAGGCCATaGTGTTTGAAAGAAACCTCC +
Preference number: 2 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLLDGRP*CLKETS
Trigger: GGAGGTTTCTTTCAAACATCATGGCCTCCCATCCAA...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATACCAAAATGCCTGTTTaGTGTTTGTCTTGCTTCGTT +
Preference number: 2 (lower is better)
Translates to: LARRYVLGNQCEQSALSHTKMPV*CLSCFV
Trigger: AACGAAGCAAGACAAACAGCAAACAGGCATTTTGGT...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATTTTGATGATGTTGATTaGATGGGAGGCCATGATGTT +
Preference number: 2 (lower is better)
Translates to: LARRYVLGNQCEQSALSHFDDVD*MGGHDV
Trigger: AACATCATGGCCTCCCATCCAATCAACATCATCAAA...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 90 bp CTGGCATTGTTGAGTGAACAGAATTTAAACACCTGGAAGTCTGCTTaGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGAGGTA +
Preference number: 2 (lower is better)
Translates to: LALLSEQNLNTWKSA*HSLVENTQTDMEEV
Trigger: TACCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGTGTTTAAATTCTGTTCACTCAACAATGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTTTGTTCAGGTTTGTGTaGATACAACGCCGGATGAAC +
Preference number: 2 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSLFRFV*IQRRMN
Trigger: GTTCATCCGGCGTTGTATTCACACAAACCTGAACAA...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAGGAAATTCTCCCACTaGAACACAGGGAAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLRKFSH*NTGKWV
Trigger: CACCCACTTCCCTGTGTTTCAGTGGGAGAATTTCCT...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTTGAGTGGGTGTCGGTaGTTACATACGCTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLLSGCR*LHTLLL
Trigger: TAAAAGCAGCGTATGTAAGCACCGACACCCACTCAA...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCGAACAGCGATCAGCCTaGTTAAGTACATCTTTTGTG +
Preference number: 2 (lower is better)
Translates to: QGFILWISLLILRVLNQLEQRSA*LSTSFV
Trigger: CACAAAAGATGTACTTAAGCAGGCTGATCGCTGTTC...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGGTGTATGGGTATCTCTaGTCCCTCAATGCTATAATG +
Preference number: 2 (lower is better)
Translates to: CDTQILKLQIGSQVTELRVYGYL*SLNAIM
Trigger: CATTATAGCATTGAGGGAGCAGAGATACCCATACAC...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAAACACCTGGAAGTCTaGTTTGCATTCTTTGGTGGA +
Preference number: 2 (lower is better)
Translates to: CDTQILKLQIGSQVTELRKHLEV*FAFFGG
Trigger: TCCACCAAAGAATGCAAAGCAGACTTCCAGGTGTTT...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTCATGAAGCTAATCTTTaGGCTGTGTGGCCTCTGATT +
Preference number: 2 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSHEANL*AVWPLI
Trigger: AATCAGAGGCCACACAGCCCAAAGATTAGCTTCATG...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAATGATGTTGATTGGATaGGAGGCCATGATGTTTGAA +
Preference number: 2 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRMMLIG*EAMMFE
Trigger: TTCAAACATCATGGCCTCCCATCCAATCAACATCAT...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTGGACCCTTTATGCACTaGTGCTGGCACTGCACAATC +
Preference number: 2 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLGPFMH*CWHCTI
Trigger: GATTGTGCAGTGCCAGCATCAGTGCATAAAGGGTCC...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGTCTGGCATTGTTGAGTaGACAGAATTTAAACACCTG +
Preference number: 2 (lower is better)
Translates to: CDTQILKLQIGSQVTELRSGIVE*TEFKHL
Trigger: CAGGTGTTTAAATTCTGTTCACTCAACAATGCCAGA...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGGTGTATGGGTATCTCTaGTCCCTCAATGCTATAATG +
Preference number: 2 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLVYGYL*SLNAIM
Trigger: CATTATAGCATTGAGGGAGCAGAGATACCCATACAC...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAGGTGCTTCTGTGTATaGGTATCTCTGCTCCCTCAA +
Preference number: 2 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLRCFCV*VSLLPQ
Trigger: TTGAGGGAGCAGAGATACCCATACACAGAAGCACCT...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTCAGAATCAGTTCTCCTaGAAGAGGTCGATGCCTGGG +
Preference number: 2 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLQNQFS*KRSMPG
Trigger: CCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTG...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTGAGGATGTGAGGAGGTaGGAGAGGAAATTCTCCCAC +
Preference number: 2 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLEDVRR*ERKFSH
Trigger: GTGGGAGAATTTCCTCTCCCACCTCCTCACATCCTC...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTCTTTGCATTCTTTGGTaGAAAACACGCAGACAGACA +
Preference number: 2 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSLCILW*KTRRQT
Trigger: TGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAG...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGACAGAATTTAAACACCTaGAAGTCTGCTTTGCATTCT +
Preference number: 2 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRQNLNT*KSALHS
Trigger: AGAATGCAAAGCAGACTTCCAGGTGTTTAAATTCTG...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 90 bp GAGTCTAAGTCATCTCAGTGTGTTCCCTCTTCCATTCATCTGGCATaGTTGAGTGAACAGAATTTAAACACCTGGAAGTCTGCTTTGCAT +
Preference number: 2 (lower is better)
Translates to: ESKSSQCVPSSIHLA*LSEQNLNTWKSALH
Trigger: ATGCAAAGCAGACTTCCAGGTGTTTAAATTCTGTTCACTCAACAATGCCAGATGAATGGAAGAGGGAACACACTGAGATGACTTAGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 90 bp CAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTaGGAGATGCAGAGGTTCTGCATTTGGATAATGGGCATTTTGAGA +
Preference number: 2 (lower is better)
Translates to: QLSRVSKFDKFSITG*EMQRFCIWIMGILR
Trigger: TCTCAAAATGCCCATTATCCAAATGCAGAACCTCTGCATCTCCAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGTTGTTCAGGTTTGTGTaGATACAACGCCGGATGAAC +
Preference number: 2 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLLFRFV*IQRRMN
Trigger: GTTCATCCGGCGTTGTATTCACACAAACCTGAACAA...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAAAGTGCTATGGTATTaGGTTGACAAGAATGTCCAT +
Preference number: 2 (lower is better)
Translates to: CDTQILKLQIGSQVTELRKVLWY*VDKNVH
Trigger: ATGGACATTCTTGTCAACTCAATACCATAGCACTTT...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTGTTCCCTTGGGCCTTaGTTGTTAATTAAAAATTGC +
Preference number: 2 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWCSLGP*LLIKNC
Trigger: GCAATTTTTAATTAACAAGCAAGGCCCAAGGGAACA...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp ATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTCAGAATTTAAACACCTaGAAGTCTGCTTTGCATTCT +
Preference number: 2 (lower is better)
Translates to: IGSQVTELRNAAFNFFHGQNLNT*KSALHS
Trigger: AGAATGCAAAGCAGACTTCCAGGTGTTTAAATTCTG...ACCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTTCCTTTCCAAGGGTCTaGTTGGTGGACCAGAGTCTA +
Preference number: 2 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLSFPRV*LVDQSL
Trigger: TAGACTCTGGTCCACCAACCAGACCCTTGGAAAGGA...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTTTTGATGATGTTGATTaGATGGGAGGCCATGATGTT +
Preference number: 2 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSFDDVD*MGGHDV
Trigger: AACATCATGGCCTCCCATCCAATCAACATCATCAAA...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 90 bp TCTAAGTCATCTCAGTGTGTTCCCTCTTCCATTCATCTGGCATTGTaGAGTGAACAGAATTTAAACACCTGGAAGTCTGCTTTGCATTCT +
Preference number: 2 (lower is better)
Translates to: SKSSQCVPSSIHLAL*SEQNLNTWKSALHS
Trigger: AGAATGCAAAGCAGACTTCCAGGTGTTTAAATTCTGTTCACTCAACAATGCCAGATGAATGGAAGAGGGAACACACTGAGATGACTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp GGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAAAACAAAGAAAGAGCTGTTTTaGGTGGGTGTCGGTGCTTAC +
Preference number: 2 (lower is better)
Translates to: GPCLLIKNCKGLYSYLKTKKELF*VGVGAY
Trigger: GTAAGCACCGACACCCACTCAAAACAGCTCTTTCTT...TGTTTTCAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTAAAGTGCTATGGTATTaGGTTGACAAGAATGTCCAT +
Preference number: 2 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSKVLWY*VDKNVH
Trigger: ATGGACATTCTTGTCAACTCAATACCATAGCACTTT...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATCACTGCACAATCTCCTaGAATCACATCCATCCACAG +
Preference number: 2 (lower is better)
Translates to: KINEGFQRNKGGAWLENNHCTIS*NHIHPQ
Trigger: CTGTGGATGGATGTGATTTCAGGAGATTGTGCAGTG...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATCATGAAGCTAATCTTTaGGCTGTGTGGCCTCTGATT +
Preference number: 2 (lower is better)
Translates to: KINEGFQRNKGGAWLENNHEANL*AVWPLI
Trigger: AATCAGAGGCCACACAGCCCAAAGATTAGCTTCATG...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR TCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATGATCAGAAAAACTTTTaGGGACATGTGTTCCCTTGG +
Preference number: 2 (lower is better)
Translates to: KINEGFQRNKGGAWLENNDQKNF*GHVFPW
Trigger: CCAAGGGAACACATGTCCTCAAAAGTTTTTCTGATC...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR GCA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTTTTGCCTATGCAAAGTaGTATGGTATTGAGTTGACA +
Preference number: 2 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLFAYAK*YGIELT
Trigger: TGTCAACTCAATACCATAGCACTTTGCATAGGCAAA...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATCAATGGAATTTCTTCTaGCTATCTGACTTCATGCAA +
Preference number: 2 (lower is better)
Translates to: KINEGFQRNKGGAWLENNQWNFF*LSDFMQ
Trigger: TTGCATGAAGTCAGATAGCCAGAAGAAATTCCATTG...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 72 bp CCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTaGCTGATGCATGCCAGGTGTGCAAGGCGAGGGATC +
Preference number: 3 (lower is better)
Translates to: PRHLSLPAVGQM*LMHARCARRGI
Trigger: GATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 72 bp GCTAATCTTTGGGCTGTGTGGCCTCTGATTCAGTGCTaGAAGCTGCAGCCCAGAGCAGTGAAGTGCTTTGGC +
Preference number: 3 (lower is better)
Translates to: ANLWAVWPLIQC*KLQPRAVKCFG
Trigger: GCCAAAGCACTTCACTGCTCTGGGCTGCAGCTTCCAGCACTGAATCAGAGGCCACACAGCCCAAAGATTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGGAAGAAAGAGCTGTTTaGAGTGGGTGTCGGTGCTTA +
Preference number: 3 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGEERAV*SGCRCL
Trigger: TAAGCACCGACACCCACTCAAAACAGCTCTTTCTTC...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR TCA 72 bp AGAGCAGTGAAGTGCTTTGGCCAAGGTCATAGTCATTaGCAGAGCTGGGGGAGGACTGCATGTCCTTCCCCA +
Preference number: 3 (lower is better)
Translates to: RAVKCFGQGHSH*QSWGRTACPSP
Trigger: TGGGGAAGGACATGCAGTCCTCCCCCAGCTCTGTCAATGACTATGACCTTGGCCAAAGCACTTCACTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 72 bp TGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTaGTTCTGTGTATGGGTATCTCTGCTCCCTCAATGC +
Preference number: 3 (lower is better)
Translates to: WKRSMPGCSMPR*FCVWVSLLPQC
Trigger: GCATTGAGGGAGCAGAGATACCCATACACAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 72 bp AGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATaGCAAGGTGCTTCTGTGTATGGGTATCTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: SSPGRGRCLGAL*QGASVYGYLCS
Trigger: GGAGCAGAGATACCCATACACAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR TCA 72 bp GAGGATGTGAGGAGGTGGGAGAGGAAATTCTCCCACTaGAACACAGGGAAGTGGGTGATTTGCAGCCAAAGG +
Preference number: 3 (lower is better)
Translates to: EDVRRWERKFSH*NTGKWVICSQR
Trigger: CCTTTGGCTGCAAATCACCCACTTCCCTGTGTTTCAGTGGGAGAATTTCCTCTCCCACCTCCTCACATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 72 bp GAAGCTAATCTTTGGGCTGTGTGGCCTCTGATTCAGTaGTGGAAGCTGCAGCCCAGAGCAGTGAAGTGCTTT +
Preference number: 3 (lower is better)
Translates to: EANLWAVWPLIQ*WKLQPRAVKCF
Trigger: AAAGCACTTCACTGCTCTGGGCTGCAGCTTCCAGCACTGAATCAGAGGCCACACAGCCCAAAGATTAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 72 bp TCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTaGGTGCTCTATGCCAAGGTGCTTCTGTGTATGGGT +
Preference number: 3 (lower is better)
Translates to: STESVLLEEVDA*VLYAKVLLCMG
Trigger: ACCCATACACAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp AGGACAGATGTGCCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACTCTTGCTTCGTTTCTTaGGCCTCTGTTGCCCATGAG +
Preference number: 3 (lower is better)
Translates to: RTDVPDACQVCKARDQKNSCFVS*ASVAHE
Trigger: CTCATGGGCAACAGAGGCCAAAGAAACGAAGCAAGA...GTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATCTTGCTTCGTTTCTTaGGCCTCTGTTGCCCATGAG +
Preference number: 3 (lower is better)
Translates to: TSIHRISSPGRGRCLGALSCFVS*ASVAHE
Trigger: CTCATGGGCAACAGAGGCCAAAGAAACGAAGCAAGA...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATAGGAGAGTAAGCGCCTaGCTCAAGGAACAGCGATCA +
Preference number: 3 (lower is better)
Translates to: LARRYVLGNQCEQSALSHRRVSA*LKEQRS
Trigger: TGATCGCTGTTCCTTGAGCAAGGCGCTTACTCTCCT...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 72 bp CAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTaGTCTATGCCAAGGTGCTTCTGTGTATGGGTATCT +
Preference number: 3 (lower is better)
Translates to: QNQFSWKRSMPG*SMPRCFCVWVS
Trigger: AGATACCCATACACAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp GGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGAGGAGGGAAGTGGGTGATTaGCAGCCAAAGGACATACAG +
Preference number: 3 (lower is better)
Translates to: GSLLCILWWKTRRQTWRRREVGD*QPKDIQ
Trigger: CTGTATGTCCTTTGGCTGCAAATCACCCACTTCCCT...CCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 72 bp TGCTATAATGGACATGAAGCTAATCTTTGGGCTGTGTaGCCTCTGATTCAGTGCTGGAAGCTGCAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: CYNGHEANLWAV*PLIQCWKLQPR
Trigger: TCTGGGCTGCAGCTTCCAGCACTGAATCAGAGGCCACACAGCCCAAAGATTAGCTTCATGTCCATTATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGGAAGAAAGAGCTGTTTaGAGTGGGTGTCGGTGCTTA +
Preference number: 3 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLEERAV*SGCRCL
Trigger: TAAGCACCGACACCCACTCAAAACAGCTCTTTCTTC...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGATTTCCAAGGGTCTGGTaGGTGGACCAGAGTCTAAGT +
Preference number: 3 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRFPRVW*VDQSLS
Trigger: ACTTAGACTCTGGTCCACCAACCAGACCCTTGGAAA...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 72 bp GGTGATTTGCAGCCAAAGGACATACAGGACCCTTTATaGACTGATGCTGGCACTGCACAATCTCCTGAAATC +
Preference number: 3 (lower is better)
Translates to: GDLQPKDIQDPL*TDAGTAQSPEI
Trigger: GATTTCAGGAGATTGTGCAGTGCCAGCATCAGTGCATAAAGGGTCCTGTATGTCCTTTGGCTGCAAATCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 72 bp GACTGGGAGAAAAGAAGAAACTGGCAAGACGGTATGTaGTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTC +
Preference number: 3 (lower is better)
Translates to: DWEKRRNWQDGM*WAISVNSQLCL
Trigger: GAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAGTTTCTTCTTTTCTCCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTTTGCTTTGTTCAGGTTaGTGTGAATACAACGCCGGA +
Preference number: 3 (lower is better)
Translates to: EITSIHRISSPGRGRCLGLLCSG*CEYNAG
Trigger: TCCGGCGTTGTATTCACACAAACCTGAACAAAGCAA...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGTGTTTGCTGTTTGTCTaGCTTCGTTTCTTTGGCCTC +
Preference number: 3 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLCLLFV*LRFFGL
Trigger: GAGGCCAAAGAAACGAAGCAAGACAAACAGCAAACA...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATATGCCTGTTTGCTGTTaGTCTTGCTTCGTTTCTTTG +
Preference number: 3 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHMPVCC*SCFVSL
Trigger: CAAAGAAACGAAGCAAGACAAACAGCAAACAGGCAT...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGAGGAGAGTAAGCGCCTaGCTCAAGGAACAGCGATCA +
Preference number: 3 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLRRVSA*LKEQRS
Trigger: TGATCGCTGTTCCTTGAGCAAGGCGCTTACTCTCCT...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGAGGGAAGTGGGTGATTaGCAGCCAAAGGACATACAG +
Preference number: 3 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWREVGD*QPKDIQ
Trigger: CTGTATGTCCTTTGGCTGCAAATCACCCACTTCCCT...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTTGCTATGGTATTGAGTaGACAAGAATGTCCATGGGT +
Preference number: 3 (lower is better)
Translates to: EITSIHRISSPGRGRCLGCYGIE*TRMSMG
Trigger: ACCCATGGACATTCTTGTCAACTCAATACCATAGCA...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp GCCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGGCCTGAAAAGTATTTaGCCTATGCAAAGTGCTATG +
Preference number: 3 (lower is better)
Translates to: ARCARRGIRKTFEDMCSLGLKSI*PMQSAM
Trigger: CATAGCACTTTGCATAGGCAAAATACTTTTCAGGCC...AAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR TCA 72 bp TTTGATGATGTTGATTGGATGGGAGGCCATGATGTTTaGAAGAAACCTCCTGGGCAGACACCACCTCATCAC +
Preference number: 3 (lower is better)
Translates to: FDDVDWMGGHDV*KKPPGQTPPHH
Trigger: GTGATGAGGTGGTGTCTGCCCAGGAGGTTTCTTTCAAACATCATGGCCTCCCATCCAATCAACATCATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR TCA 72 bp ACTCTGTGGCTTTCACTAGATCCTGGCCTAGCTAAATaGTTCATTTCCCCCATGGCACAGAGCCTTGATTAC +
Preference number: 3 (lower is better)
Translates to: TLWLSLDPGLAK*FISPMAQSLDY
Trigger: GTAATCAAGGCTCTGTGCCATGGGGGAAATGAATCATTTAGCTAGGCCAGGATCTAGTGAAAGCCACAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR TCA 72 bp AAGACCCCAGGGCCAAGGATTAGGGACAATCCTTTGTaGCACCCAAATCCTGAAACTTCAAATAGGGTCACA +
Preference number: 3 (lower is better)
Translates to: KTPGPRIRDNPL*HPNPETSNRVT
Trigger: TGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACAAAGGATTGTCCCTAATCCTTGGCCCTGGGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 72 bp AGAGTAAGCGCCTTGCTCAAGGAACAGCGATCAGCCTaGTTAAGTACATCTTTTGTGAGAAGAGAAACTGCC +
Preference number: 3 (lower is better)
Translates to: RVSALLKEQRSA*LSTSFVRRETA
Trigger: GGCAGTTTCTCTTCTCACAAAAGATGTACTTAAGCAGGCTGATCGCTGTTCCTTGAGCAAGGCGCTTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTTGCTTTGTTCAGGTTaGTGTGAATACAACGCCGGA +
Preference number: 3 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWLLCSG*CEYNAG
Trigger: TCCGGCGTTGTATTCACACAAACCTGAACAAAGCAA...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp ATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTTTTCTTTGGCCTCTGTaGCCCATGAGAAATGAGGAA +
Preference number: 3 (lower is better)
Translates to: IGSQVTELRNAAFNFFHGFLWPL*PMRNEE
Trigger: TTCCTCATTTCTCATGGGCAACAGAGGCCAAAGAAA...ACCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATGGCCTTTACTCCTATTaGAAAACACTGAGTAAAAGC +
Preference number: 3 (lower is better)
Translates to: LARRYVLGNQCEQSALSHGLYSY*KTLSKS
Trigger: GCTTTTACTCAGTGTTTTCAAATAGGAGTAAAGGCC...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 72 bp AGGTGCTTCTGTGTATGGGTATCTCTGCTCCCTCAATaGTATAATGGACATGAAGCTAATCTTTGGGCTGTG +
Preference number: 3 (lower is better)
Translates to: RCFCVWVSLLPQ*YNGHEANLWAV
Trigger: CACAGCCCAAAGATTAGCTTCATGTCCATTATAGCATTGAGGGAGCAGAGATACCCATACACAGAAGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR GCA 72 bp GCTCTATGCCAAGGTGCTTCTGTGTATGGGTATCTCTaGTCCCTCAATGCTATAATGGACATGAAGCTAATC +
Preference number: 3 (lower is better)
Translates to: ALCQGASVYGYL*SLNAIMDMKLI
Trigger: GATTAGCTTCATGTCCATTATAGCATTGAGGGAGCAGAGATACCCATACACAGAAGCACCTTGGCATAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp AGAGTAAGCGCCTTGCTCAAGGAACAGCGATCAGCCTGCTTAAGTACATCTTTTATGCCTGTTTGCTGTTaGTCTTGCTTCGTTTCTTTG +
Preference number: 3 (lower is better)
Translates to: RVSALLKEQRSACLSTSFMPVCC*SCFVSL
Trigger: CAAAGAAACGAAGCAAGACAAACAGCAAACAGGCAT...AAAAGATGTACTTAAGCAGGCTGATCGCTGTTCCTTGAGCAAGGCGCTTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTACCTGGAAGTCTGCTTaGCATTCTTTGGTGGAAAAC +
Preference number: 3 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSTWKSA*HSLVEN
Trigger: GTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTACCTGGAAGTCTGCTTaGCATTCTTTGGTGGAAAAC +
Preference number: 3 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLTWKSA*HSLVEN
Trigger: GTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATTCCATTCATCTGGCATaGTTGAGTGAACAGAATTTA +
Preference number: 3 (lower is better)
Translates to: LARRYVLGNQCEQSALSHSIHLA*LSEQNL
Trigger: TAAATTCTGTTCACTCAACAATGCCAGATGAATGGA...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTACAGTAGGAGTGCAGTaGTCAAGGGTGTCTAAGTTT +
Preference number: 3 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSTVGVQ*SRVSKF
Trigger: AAACTTAGACACCCTTGACAACTGCACTCCTACTGT...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGTGTTTGCTGTTTGTCTaGCTTCGTTTCTTTGGCCTC +
Preference number: 3 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLCLLFV*LRFFGL
Trigger: GAGGCCAAAGAAACGAAGCAAGACAAACAGCAAACA...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGGGCCTTTACTCCTATTaGAAAACACTGAGTAAAAGC +
Preference number: 3 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLGLYSY*KTLSKS
Trigger: GCTTTTACTCAGTGTTTTCAAATAGGAGTAAAGGCC...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 72 bp CTTGATTACACATGTAATTTGATGATGTTGATTGGATaGGAGGCCATGATGTTTGAAAGAAACCTCCTGGGC +
Preference number: 3 (lower is better)
Translates to: LDYTCNLMMLIG*EAMMFERNLLG
Trigger: GCCCAGGAGGTTTCTTTCAAACATCATGGCCTCCCATCCAATCAACATCATCAAATTACATGTGTAATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR-3UTR CAA 90 bp GGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAAAACAGAATGCAGAAAGTATTaGTGTACAGAGACGACAGCA +
Preference number: 3 (lower is better)
Translates to: GPCLLIKNCKGLYSYLKTECRKY*CTETTA
Trigger: TGCTGTCGTCTCTGTACACAAATACTTTCTGCATTC...TGTTTTCAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CCA 72 bp AGTGAATTTCGTGAAAACCAGCAATGGAATTTCTTCTaGCTATCTGACTTCATGCAAATGAGGCTAGAATAT +
Preference number: 3 (lower is better)
Translates to: SEFRENQQWNFF*LSDFMQMRLEY
Trigger: ATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCATTGCTGGTTTTCACGAAATTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGGCAGGTAGAGGTGGGTaGGCTGCGTGCAGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGAGRGG*AACSAP
Trigger: CGGCGCACTGCACGCAGCTCACCCACCTCTACCTGC...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGGGCCGACCTCCGGCCTaGAGAGGTCCCCGCACTCCA +
Preference number: 4 (lower is better)
Translates to: ESTVILMMDPRCCSREGGGRPPA*RGPRTP
Trigger: TGGAGTGCGGGGACCTCTCCAGGCCGGAGGTCGGCC...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR TCA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGCCACCGTCTCCCCGGTaGTGGAGGACGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ESTVILMMDPRCCSREGGPPSPR*WRTRRW
Trigger: CCACCTCCTCGTCCTCCATCACCGGGGAGACGGTGG...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AGGACAGATGTGCCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACCCACACCGTGGTCCGTaGTGCCCTCGCAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: RTDVPDACQVCKARDQKNPHRGP*CPRSPS
Trigger: CGAGGGGCTGCGAGGGCATCACGGACCACGGTGTGG...GTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGGGTTGGTGTGCTCGATaGCGCAGCGCTTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGGWCAR*RSACSG
Trigger: GCCACTGCAAGCGCTGCGTCATCGAGCACACCAACC...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGGGGCTGGGCTGGGCGTaGTCAGTGTGCGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: ESTVILMMDPRCCSREGGGLGWA*SVCACS
Trigger: TGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCC...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGGCTTGCAGTGGCGTTTaGCAAAGCGCAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGACSGV*QSAGPP
Trigger: TGGAGGCCCTGCGCTTTGTCAAACGCCACTGCAAGC...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGACGTTGGGGGTGTCCTaGCAGAGTCTGCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ESTVILMMDPRCCSREGGTLGVS*QSLRVS
Trigger: GCTGACCCGCAGACTCTGCCAGGACACCCCCAACGT...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 72 bp CGGCCTTGGGGGCCTGAGCGGAGGAGAGTAAGCGCCTaGCTCAAGGAACAGCGATCAGCCTGCTTAAGTACA +
Preference number: 4 (lower is better)
Translates to: RPWGPERRRVSA*LKEQRSACLST
Trigger: TGTACTTAAGCAGGCTGATCGCTGTTCCTTGAGCAAGGCGCTTACTCTCCTCCGCTCAGGCCCCCAAGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AGGACAGATGTGCCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACGGGGCCGGGCACAGCTaGAGCACTTACAATCCGCGC +
Preference number: 4 (lower is better)
Translates to: RTDVPDACQVCKARDQKNGAGHS*STYNPR
Trigger: GCGCGGATTGTAAGTGCTGCAGCTGTGCCCGGCCCC...GTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR GCA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTCTGCGGCGCACGTCCTaGGCGCTCGGCCCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: EITSIHRISSPGRGRCLGLRRTS*ALGPRK
Trigger: TTTCCTCGGGCCGAGCGCGCAGGACGTGCGCCGCAG...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR CCA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGACGCAGCGCTTGCAGTaGCGTTTGACAAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGTQRLQ*RLTKRR
Trigger: CCTGCGCTTTGTCAAACGCCACTGCAAGCGCTGCGT...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATGGGAAAGGGCGGCCTTaGGGGCCTGAGCGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHGKGRP*GPERRR
Trigger: TCTCCTCCGCTCAGGCCCCCAAGGCCGCCCTTTCCC...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGACTTACAATCCGCGCTaGGGGCCGGCGGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLTYNPR*GPAGAA
Trigger: CGCTGCGCCCGCCGGCCCCCAGCGCGGATTGTAAGT...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR GCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGCGGTCTATGCTGGCCTaGTCCTTCTGGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLRSMLA*SFWGLE
Trigger: CTCCAGACCCCAGAAGGAGCAGGCCAGCATAGACCG...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATGTGAGCTGCGTGCAGTaGGCCGCGATGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHVSCVQ*AAMVCR
Trigger: CCTGCACACCATCGCGGCGCACTGCACGCAGCTCAC...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGGCCGCAGTGCGCGATaGTCAGGTACCGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: TWKSALHSLVENTQTDMEGRSAR*SGTAGG
Trigger: CCCGCCTGCGGTACCTGAGCATCGCGCACTGCGGCC...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AGGACAGATGTGCCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACGGCAGCACTGGGCGATaGTGTACAGCCCTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: RTDVPDACQVCKARDQKNGSTGR*CTALGL
Trigger: CAGACCGAGGGCTGTACACCATCGCCCAGTGCTGCC...GTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGACGCAGCGCTTGCAGTaGCGTTTGACAAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: ESTVILMMDPRCCSREGGTQRLQ*RLTKRR
Trigger: CCTGCGCTTTGTCAAACGCCACTGCAAGCGCTGCGT...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAGCAGGTAGAGGTGGGTaGGCTGCGTGCAGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRAGRGG*AACSAP
Trigger: CGGCGCACTGCACGCAGCTCACCCACCTCTACCTGC...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTGGATGCCCACGTCGGTaGCCCGGCCGCAGTGCGCGA +
Preference number: 4 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLGCPRR*PGRSAR
Trigger: TCGCGCACTGCGGCCGGGTCACCGACGTGGGCATCC...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGCGCAGCCCCTCGCGTTaGGGTAGCGCAGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TWKSALHSLVENTQTDMERSPSR*GSAACC
Trigger: GCAGCAAGCTGCGCTACCTCAACGCGAGGGGCTGCG...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCCCACACCGTGGTCCGTaGTGCCCTCGCAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: QGFILWISLLILRVLNQLPHRGP*CPRSPS
Trigger: CGAGGGGCTGCGAGGGCATCACGGACCACGGTGTGG...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTAGGTTGGTGTGCTCGATaGCGCAGCGCTTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TSIHRISSPGRGRCLGALGWCAR*RSACSG
Trigger: GCCACTGCAAGCGCTGCGTCATCGAGCACACCAACC...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCGTCGGGGGCGGGGAGTaGACCATGGCCACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: QGFILWISLLILRVLNQLVGGGE*TMATVS
Trigger: GGAGACGGTGGCCATGGTGCACTCCCCGCCCCCGAC...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATCCGGGAGCCGGTCTATaGTGGCCTGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LARRYVLGNQCEQSALSHPGAGL*WPAPSG
Trigger: CCCAGAAGGAGCAGGCCAGCATAGACCGGCTCCCGG...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGTGCGCCGCGATGGTGTaGAGGCCTTCGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLCAAMV*RPSSSS
Trigger: GCTGGAGGACGAAGGCCTGCACACCATCGCGGCGCA...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCTCCTGAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCGTGACCCGGCCGCAGTaGGCGATGCTCAGGTACCGC +
Preference number: 4 (lower is better)
Translates to: SPEITSIHRISSPGRGRCVTRPQ*AMLRYR
Trigger: GCGGTACCTGAGCATCGCGCACTGCGGCCGGGTCAC...GCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGGGTAGCGCAGCTTGCTaGAGTACTTGGCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLGSAAC*STWPRS
Trigger: GCTACGTGGCCAAGTACTGCAGCAAGCTGCGCTACC...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGTGGACATATCAGGGCTaGGCTGGGCGTGCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLWTYQG*AGRAQC
Trigger: ACACTGAGCACGCCCAGCCCAGCCCTGATATGTCCA...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGGCGCAGCGGCACAGCTaGTTGGTGGGCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLAQRHS*LVGRKE
Trigger: CTCCTTCCTGCCCACCAACCAGCTGTGCCGCTGCGC...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GCCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGCGCAGCGGCACAGCTaGTTGGTGGGCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: ARCARRGIRKTFEDMCSLAQRHS*LVGRKE
Trigger: CTCCTTCCTGCCCACCAACCAGCTGTGCCGCTGCGC...AAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGGAAGAGGTCGATGCCTaGGTGCTCTATGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: ESTVILMMDPRCCSREGGEEVDA*VLYAKV
Trigger: CACCTTGGCATAGAGCACCCAGGCATCGACCTCTTC...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGTTACGGTTTCCAGCATaGGACACACGTTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: ESTVILMMDPRCCSREGGLRFPA*DTRWGC
Trigger: ACACCCCCAACGTGTGTCTCATGCTGGAAACCGTAA...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTGCGGCCTTGGGGGCCTaGGCGGAGGAGAGTAAGCGC +
Preference number: 4 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSAALGA*AEESKR
Trigger: GCGCTTACTCTCCTCCGCTCAGGCCCCCAAGGCCGC...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGGCGGCCTTGGGGGCCTaGGCGGAGGAGAGTAAGCGC +
Preference number: 4 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLAALGA*AEESKR
Trigger: GCGCTTACTCTCCTCCGCTCAGGCCCCCAAGGCCGC...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGGGACCCTTTATGCACTaGTGCTGGCACTGCACAATC +
Preference number: 4 (lower is better)
Translates to: ESTVILMMDPRCCSREGGGPFMH*CWHCTI
Trigger: GATTGTGCAGTGCCAGCATCAGTGCATAAAGGGTCC...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGGCTGGGCAATCAGTGTaGACAGTCAGCTTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGAGQSV*TVSFVS
Trigger: TGAGACAAAGCTGACTGTTCACACTGATTGCCCAGC...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATTGGGCGTGCTCAGTGTaGGCATGCTCAGGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHWACSV*ACSGRS
Trigger: ACTCCGACCTGAGCATGCGCACACTGAGCACGCCCA...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGAGGAAGGAGAAGATCTaGACCATGGAGTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLRKEKI*TMEWSG
Trigger: CCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCT...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCTCCTGAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCGTGAGCTGCGTGCAGTaGGCCGCGATGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPEITSIHRISSPGRGRCVSCVQ*AAMVCR
Trigger: CCTGCACACCATCGCGGCGCACTGCACGCAGCTCAC...GCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTCAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTGGCCGCAGTGCGCGATaGTCAGGTACCGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSGRSAR*SGTAGG
Trigger: CCCGCCTGCGGTACCTGAGCATCGCGCACTGCGGCC...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AACCTTCCCGGAAGAAAGAGCTGTTTTGAGTGGGTGTCGGTGCTTACATACGCTTTGGCGGCCACGATCTaGAAGCCCTGGCCGGTGATG +
Preference number: 4 (lower is better)
Translates to: NLPGRKSCFEWVSVLTYALAATI*KPWPVM
Trigger: CATCACCGGCCAGGGCTTGCAGATCGTGGCCGCCAA...AGCGTATGTAAGCACCGACACCCACTCAAAACAGCTCTTTCTTCCGGGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGCCTGGAAGAGGTCGATaGCTGGGTGCTCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLPGRGR*LGALCQ
Trigger: TTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGG...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTGCGGCGGCCACTTGTTaGGGGTCCCCGGAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLAAATC*GSPERV
Trigger: CACTCGCTCCGGGGACCCGCAACAAGTGGCCGCCGC...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR GCA 90 bp AGAGTAAGCGCCTTGCTCAAGGAACAGCGATCAGCCTGCTTAAGTACATCTTTTTCCAGTGGGAGGGGGTaGTGCGTCCCCTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RVSALLKEQRSACLSTSFSSGRG*CVPSWH
Trigger: GTGCCAGGAGGGGACGCAGCACCCCCTCCCACTGGA...AAAAGATGTACTTAAGCAGGCTGATCGCTGTTCCTTGAGCAAGGCGCTTACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR GCA 90 bp ATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTGGGACACTCCATAGCTaGGGCGCACGTCCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: IGSQVTELRNAAFNFFHGGTLHS*GARPAR
Trigger: GCGCGCAGGACGTGCGCCGCAGCTATGGAGTGTCCC...ACCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR CCA 90 bp AGAGTAAGCGCCTTGCTCAAGGAACAGCGATCAGCCTGCTTAAGTACATCTTTTCTGGCCTGCTCCTTCTaGGGTCTGGAGGCGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RVSALLKEQRSACLSTSFLACSF*GLEASR
Trigger: CCGGCTCGCCTCCAGACCCCAGAAGGAGCAGGCCAG...AAAAGATGTACTTAAGCAGGCTGATCGCTGTTCCTTGAGCAAGGCGCTTACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGGGAGCCGGTCTATGCTaGCCTGCTCCTTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLGAGLC*PAPSGV
Trigger: GACCCCAGAAGGAGCAGGCCAGCATAGACCGGCTCC...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATACGTTGGGGGTGTCCTaGCAGAGTCTGCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LARRYVLGNQCEQSALSHTLGVS*QSLRVS
Trigger: GCTGACCCGCAGACTCTGCCAGGACACCCCCAACGT...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTCCACCGTCTCCCCGGTaGTGGAGGACGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLPPSPR*WRTRRW
Trigger: CCACCTCCTCGTCCTCCATCACCGGGGAGACGGTGG...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCCGCCTGCAGCCACTaGCAGTTACGGTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: EITSIHRISSPGRGRCLGAACSH*QLRFPA
Trigger: TGCTGGAAACCGTAACTGTCAGTGGCTGCAGGCGGC...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTCGCAGCCCCTCGCGTTaGGGTAGCGCAGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSRSPSR*GSAACC
Trigger: GCAGCAAGCTGCGCTACCTCAACGCGAGGGGCTGCG...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGCACTGCACAATCTCCTaGAATCACATCCATCCACAG +
Preference number: 4 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGHCTIS*NHIHPQ
Trigger: CTGTGGATGGATGTGATTTCAGGAGATTGTGCAGTG...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTCGGTCTATGCTGGCCTaGTCCTTCTGGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: EITSIHRISSPGRGRCLGRSMLA*SFWGLE
Trigger: CTCCAGACCCCAGAAGGAGCAGGCCAGCATAGACCG...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATAAAGCCGGGTTGGTGTaGTCGATGACGCAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHKAGLV*SMTQRL
Trigger: CAAGCGCTGCGTCATCGAGCACACCAACCCGGCTTT...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGGCTGTAGGACAGATGTaGCTGATGCATGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLAVGQM*LMHARC
Trigger: ACACCTGGCATGCATCAGGCACATCTGTCCTACAGC...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTATATCAGGGCTGGGCTaGGCGTGCTCAGTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: EITSIHRISSPGRGRCLGISGLG*ACSVCA
Trigger: TGCGCACACTGAGCACGCCCAGCCCAGCCCTGATAT...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATTGGAGGACGAGGAGGTaGACGAGCCCCTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHWRTRR*TSPFHS
Trigger: AGAATGGAAGGGGCTCGTCCACCTCCTCGTCCTCCA...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGCAAAGACGGCCTCGTTaGAGATATTGTAACAGCCTG +
Preference number: 4 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGQRRPR*RYCNSL
Trigger: CAGGCTGTTACAATATCTCCAACGAGGCCGTCTTTG...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCTCCTGAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCTGCAGTGCGCCGCGATaGTGTGCAGGCCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SPEITSIHRISSPGRGRCCSAPR*CAGLRP
Trigger: AGGACGAAGGCCTGCACACCATCGCGGCGCACTGCA...GCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTCAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGTGCAGTGCGCCGCGATaGTGTGCAGGCCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: TWKSALHSLVENTQTDMECSAPR*CAGLRP
Trigger: AGGACGAAGGCCTGCACACCATCGCGGCGCACTGCA...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGAGGACGATCTGCAAGCCCTaGCCGGTGATGCTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GSLLCILWWKTRRQTWRRTICKP*PVMLSQ
Trigger: CTGCGAGAGCATCACCGGCCAGGGCTTGCAGATCGT...CCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGGGGCGCGGTCCACGTTaGTGGTCTCGCCCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLGRGPR*WSRPSG
Trigger: GCCTGACGGGCGAGACCATCAACGTGGACCGCGCCC...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AGGACAGATGTGCCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACGGAGGCCATGATGTTTaGAAGAAACCTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RTDVPDACQVCKARDQKNGGHDV*KKPPGQ
Trigger: CTGCCCAGGAGGTTTCTTTCAAACATCATGGCCTCC...GTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGGGAGAACAGAATGGATaGACAGGAGACTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: ESTVILMMDPRCCSREGGGEQNG*TGDWEK
Trigger: TTTCTCCCAGTCTCCTGTTCATCCATTCTGTTCTCC...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCTTGGCGGCCACGATCTaGAAGCCCTGGCCGGTGATG +
Preference number: 4 (lower is better)
Translates to: QGFILWISLLILRVLNQLLAATI*KPWPVM
Trigger: CATCACCGGCCAGGGCTTGCAGATCGTGGCCGCCAA...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp GGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGAGGATGGATCCTCGCTGCTaGTCTAGGGAGGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GSLLCILWWKTRRQTWRRMDPRC*SREGGC
Trigger: ACACCCTCCCTCCCTAGAGCAGCAGCGAGGATCCAT...CCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAATATCAGGGCTGGGCTaGGCGTGCTCAGTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRISGLG*ACSVCA
Trigger: TGCGCACACTGAGCACGCCCAGCCCAGCCCTGATAT...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCGGAGCCGGTCTATGCTaGCCTGCTCCTTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QGFILWISLLILRVLNQLGAGLC*PAPSGV
Trigger: GACCCCAGAAGGAGCAGGCCAGCATAGACCGGCTCC...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GCCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTAGAAGATCTGCACCATaGAGTGGTCCGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: ARCARRGIRKTFEDMCSLRRSAP*SGPGAG
Trigger: ACCGGCTCCCGGACCACTCCATGGTGCAGATCTTCT...AAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AACCTTCCCGGAAGAAAGAGCTGTTTTGAGTGGGTGTCGGTGCTTACATACGCTAGCGGCACAGCTGGTTaGTGGGCAGGAAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: NLPGRKSCFEWVSVLTYASGTAG*WAGRRR
Trigger: TCTTCTCCTTCCTGCCCACCAACCAGCTGTGCCGCT...AGCGTATGTAAGCACCGACACCCACTCAAAACAGCTCTTTCTTCCGGGAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GCCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGCTTGCTGCAGTACTTaGCCACGTAGCGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: ARCARRGIRKTFEDMCSLACCST*PRSGCP
Trigger: TGGGCATCCGCTACGTGGCCAAGTACTGCAGCAAGC...AAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGAGGTACTCCACACCGTaGTCCGTGATGCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: TWKSALHSLVENTQTDMERYSTP*SVMPSQ
Trigger: CTGCGAGGGCATCACGGACCACGGTGTGGAGTACCT...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GCCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGGAGGTCAAAGCAGTTaGCGGCCACGATCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: ARCARRGIRKTFEDMCSLGGQSS*RPRSAS
Trigger: GCTTGCAGATCGTGGCCGCCAACTGCTTTGACCTCC...AAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATGGAGGTCAAAGCAGTTaGCGGCCACGATCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: LARRYVLGNQCEQSALSHGGQSS*RPRSAS
Trigger: GCTTGCAGATCGTGGCCGCCAACTGCTTTGACCTCC...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGTCCTTTCCAAGGGTCTaGTTGGTGGACCAGAGTCTA +
Preference number: 4 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLSFPRV*LVDQSL
Trigger: TAGACTCTGGTCCACCAACCAGACCCTTGGAAAGGA...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGAGGCACTTTGGAGCATCCTaGCACATCCAGGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSLLCILWWKTRRQTWRRHFGAS*HIQVLQ
Trigger: CTGGAGCACCTGGATGTGTCAGGATGCTCCAAAGTG...CCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGCCTCCCGGGTCAAGCTaGTGCAGGTCACTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: CDTQILKLQIGSQVTELRPPGSS*CRSLWS
Trigger: GCTCCAAAGTGACCTGCATCAGCTTGACCCGGGAGG...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAAAACAGGATGCCCACGTCGGTaGCCCGGCCGCAGTGCGCGA +
Preference number: 4 (lower is better)
Translates to: GPCLLIKNCKGLYSYLKTGCPRR*PGRSAR
Trigger: TCGCGCACTGCGGCCGGGTCACCGACGTGGGCATCC...TGTTTTCAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AGGACAGATGTGCCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACACACAGGGAAGTGGGTaGTTTGCAGCCAAAGGACAT +
Preference number: 4 (lower is better)
Translates to: RTDVPDACQVCKARDQKNTQGSG*FAAKGH
Trigger: ATGTCCTTTGGCTGCAAATCACCCACTTCCCTGTGT...GTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTCCTGACACATCCAGGTaGTCCAGATTAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: EITSIHRISSPGRGRCLGPDTSR*SRLGQR
Trigger: CCTCTGCCCTAATCTGGAGCACCTGGATGTGTCAGG...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCTCCTGAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCGGTAGCGCAGCTTGCTaGAGTACTTGGCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: SPEITSIHRISSPGRGRCGSAAC*STWPRS
Trigger: GCTACGTGGCCAAGTACTGCAGCAAGCTGCGCTACC...GCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTCAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGATGGATCCTCGCTGCTaGTCTAGGGAGGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: TWKSALHSLVENTQTDMEMDPRC*SREGGC
Trigger: ACACCCTCCCTCCCTAGAGCAGCAGCGAGGATCCAT...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AACCTTCCCGGAAGAAAGAGCTGTTTTGAGTGGGTGTCGGTGCTTACATACGCTTCCTGGGAGATTCGGTaGACATATCAGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NLPGRKSCFEWVSVLTYASWEIR*TYQGWA
Trigger: AGCCCAGCCCTGATATGTCCACCGAATCTCCCAGGA...AGCGTATGTAAGCACCGACACCCACTCAAAACAGCTCTTTCTTCCGGGAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGCTGGCCTGCTCCTTCTaGGGTCTGGAGGCGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLLACSF*GLEASR
Trigger: CCGGCTCGCCTCCAGACCCCAGAAGGAGCAGGCCAG...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGATCTGCACCATGGAGTaGTCCGGGAGCCGGTCTATG +
Preference number: 4 (lower is better)
Translates to: TWKSALHSLVENTQTDMEICTME*SGSRSM
Trigger: CATAGACCGGCTCCCGGACCACTCCATGGTGCAGAT...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GCCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGGCACAGCTGGTTGGTaGGCAGGAAGGAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: ARCARRGIRKTFEDMCSLGTAGW*AGRRRS
Trigger: AGATCTTCTCCTTCCTGCCCACCAACCAGCTGTGCC...AAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTGGCAGCACTGGGCGATaGTGTACAGCCCTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLGSTGR*CTALGL
Trigger: CAGACCGAGGGCTGTACACCATCGCCCAGTGCTGCC...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCACGATCTGCAAGCCCTaGCCGGTGATGCTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: QGFILWISLLILRVLNQLTICKP*PVMLSQ
Trigger: CTGCGAGAGCATCACCGGCCAGGGCTTGCAGATCGT...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGAGGTGCTTCTGTGTATaGGTATCTCTGCTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLRCFCV*VSLLPQ
Trigger: TTGAGGGAGCAGAGATACCCATACACAGAAGCACCT...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTTTACGGTTTCCAGCATaGGACACACGTTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: EITSIHRISSPGRGRCLGLRFPA*DTRWGC
Trigger: ACACCCCCAACGTGTGTCTCATGCTGGAAACCGTAA...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTGCCGCCTGCAGCCACTaGCAGTTACGGTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSAACSH*QLRFPA
Trigger: TGCTGGAAACCGTAACTGTCAGTGGCTGCAGGCGGC...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTAGATATTGTAACAGCCTaGGACTTCCAGTCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: TSIHRISSPGRGRCLGALDIVTA*DFQSPQ
Trigger: CTGAGGCGACTGGAAGTCTCAGGCTGTTACAATATC...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AGGACAGATGTGCCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACCACTGCACAATCTCCTaGAATCACATCCATCCACAG +
Preference number: 4 (lower is better)
Translates to: RTDVPDACQVCKARDQKNHCTIS*NHIHPQ
Trigger: CTGTGGATGGATGTGATTTCAGGAGATTGTGCAGTG...GTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTAAGGAAATTCTCCCACTaGAACACAGGGAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TSIHRISSPGRGRCLGALRKFSH*NTGKWV
Trigger: CACCCACTTCCCTGTGTTTCAGTGGGAGAATTTCCT...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGAGGGACAATCCTTTGTaGCACCCAAATCCTGAAACT +
Preference number: 4 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLRDNPL*HPNPET
Trigger: AGTTTCAGGATTTGGGTGTCACAAAGGATTGTCCCT...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGGGATGGAAATCTGTTTaGCATGCAAGGGTGACAGTT +
Preference number: 4 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLGWKSV*HARVTV
Trigger: AACTGTCACCCTTGCATGGCAAACAGATTTCCATCC...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCTGGGTGCTCTATaGCAAGGTGCTTCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: TSIHRISSPGRGRCLGALCLGAL*QGASVY
Trigger: ATACACAGAAGCACCTTGGCATAGAGCACCCAGGCA...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGGATGCATGCCAGGTGTaGAAGGCGAGGGATCAGAAA +
Preference number: 4 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLDACQV*KARDQK
Trigger: TTTCTGATCCCTCGCCTTGCACACCTGGCATGCATC...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATGCTGTAGGACAGATGTaGCTGATGCATGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LARRYVLGNQCEQSALSHAVGQM*LMHARC
Trigger: ACACCTGGCATGCATCAGGCACATCTGTCCTACAGC...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCTCCTGAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCACTGCCGTACTGTTTaGCATTGTTCGCGCCCATCC +
Preference number: 4 (lower is better)
Translates to: SPEITSIHRISSPGRGRCHCRTV*HCSRPS
Trigger: GGATGGGCGCGAACAATGGCAAACAGTACGGCAGTG...GCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTCAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR GCA 90 bp AGAGTAAGCGCCTTGCTCAAGGAACAGCGATCAGCCTGCTTAAGTACATCTTTTTGCTCAGTGTGCGCATaGTCAGGTCGGAGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: RVSALLKEQRSACLSTSFCSVCA*SGRSLR
Trigger: GCGAAGACTCCGACCTGAGCATGCGCACACTGAGCA...AAAAGATGTACTTAAGCAGGCTGATCGCTGTTCCTTGAGCAAGGCGCTTACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR CCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCTGGAGGACGAGGAGGTaGACGAGCCCCTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: QGFILWISLLILRVLNQLWRTRR*TSPFHS
Trigger: AGAATGGAAGGGGCTCGTCCACCTCCTCGTCCTCCA...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGATCTGCACCATGGAGTaGTCCGGGAGCCGGTCTATG +
Preference number: 4 (lower is better)
Translates to: CDTQILKLQIGSQVTELRICTME*SGSRSM
Trigger: CATAGACCGGCTCCCGGACCACTCCATGGTGCAGAT...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGGCTTGCTGCAGTACTTaGCCACGTAGCGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWACCST*PRSGCP
Trigger: TGGGCATCCGCTACGTGGCCAAGTACTGCAGCAAGC...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTAGGTACTCCACACCGTaGTCCGTGATGCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLRYSTP*SVMPSQ
Trigger: CTGCGAGGGCATCACGGACCACGGTGTGGAGTACCT...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTCAGAATCAGTTCTCCTaGAAGAGGTCGATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EITSIHRISSPGRGRCLGQNQFS*KRSMPG
Trigger: CCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTG...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGGAGGATGTGAGGAGGTaGGAGAGGAAATTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLEDVRR*ERKFSH
Trigger: GTGGGAGAATTTCCTCTCCCACCTCCTCACATCCTC...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGCTTTGCATTCTTTGGTaGAAAACACGCAGACAGACA +
Preference number: 4 (lower is better)
Translates to: ESTVILMMDPRCCSREGGLCILW*KTRRQT
Trigger: TGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAG...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGGAGAAAAGAAGAAACTaGCAAGACGGTATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLEKRRN*QDGMCW
Trigger: CCAGCACATACCGTCTTGCCAGTTTCTTCTTTTCTC...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTGCTTGCAGTGGCGTTTaGCAAAGCGCAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTACSGV*QSAGPP
Trigger: TGGAGGCCCTGCGCTTTGTCAAACGCCACTGCAAGC...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGGAATACAACGCCGGATaGACTCTGTCCCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLEYNAG*TLSLQK
Trigger: CTTCTGAAGGGACAGAGTTCATCCGGCGTTGTATTC...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AGGACAGATGTGCCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACGAAACTGCCTACAAATaGCCTGACCAAAATGCCTGT +
Preference number: 4 (lower is better)
Translates to: RTDVPDACQVCKARDQKNETAYK*PDQNAC
Trigger: ACAGGCATTTTGGTCAGGTCATTTGTAGGCAGTTTC...GTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGAAAGTGCTATGGTATTaGGTTGACAAGAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGKVLWY*VDKNVH
Trigger: ATGGACATTCTTGTCAACTCAATACCATAGCACTTT...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGGACCCTTTATGCACTaGTGCTGGCACTGCACAATC +
Preference number: 4 (lower is better)
Translates to: TWKSALHSLVENTQTDMEGPFMH*CWHCTI
Trigger: GATTGTGCAGTGCCAGCATCAGTGCATAAAGGGTCC...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TCTCCTGAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCATCTGGGCTTTGCTGTaGTTAGGTGTGCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SPEITSIHRISSPGRGRCIWALL*LGVLVP
Trigger: AGGCACCAGCACACCTAATCACAGCAAAGCCCAGAT...GCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTCAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAATCTGGGCTTTGCTGTaGTTAGGTGTGCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRIWALL*LGVLVP
Trigger: AGGCACCAGCACACCTAATCACAGCAAAGCCCAGAT...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATTGGATGGGAGGCCATaGTGTTTGAAAGAAACCTCC +
Preference number: 4 (lower is better)
Translates to: TSIHRISSPGRGRCLGALLDGRP*CLKETS
Trigger: GGAGGTTTCTTTCAAACATCATGGCCTCCCATCCAA...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTAGGAAGACAGTTTAGGTaGTGCGGTCAGGGATTCATT +
Preference number: 4 (lower is better)
Translates to: TSIHRISSPGRGRCLGALGRQFR*CGQGFI
Trigger: AATGAATCCCTGACCGCATCACCTAAACTGTCTTCC...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATGCTTTAGTGGGCGTGTaGTCTGTACTTGAACTCACG +
Preference number: 4 (lower is better)
Translates to: LARRYVLGNQCEQSALSHALVGV*SVLELT
Trigger: CGTGAGTTCAAGTACAGATCACACGCCCACTAAAGC...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR GCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATGTGACCCGGCCGCAGTaGGCGATGCTCAGGTACCGC +
Preference number: 4 (lower is better)
Translates to: KINEGFQRNKGGAWLENNVTRPQ*AMLRYR
Trigger: GCGGTACCTGAGCATCGCGCACTGCGGCCGGGTCAC...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTAAAGCCGGGTTGGTGTaGTCGATGACGCAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLKAGLV*SMTQRL
Trigger: CAAGCGCTGCGTCATCGAGCACACCAACCCGGCTTT...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp GGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGAGGTGCCTGGGTGCTCTATaGCAAGGTGCTTCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: GSLLCILWWKTRRQTWRRCLGAL*QGASVY
Trigger: ATACACAGAAGCACCTTGGCATAGAGCACCCAGGCA...CCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp ATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTAGGTCGATGCCTGGGTaGTCTATGCCAAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: IGSQVTELRNAAFNFFHGRSMPG*SMPRCF
Trigger: GAAGCACCTTGGCATAGAGCACCCAGGCATCGACCT...ACCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTAATACAGGACCCTTTATaGACTGATGCTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: TSIHRISSPGRGRCLGALIQDPL*TDAGTA
Trigger: TGCAGTGCCAGCATCAGTGCATAAAGGGTCCTGTAT...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATGGGAAGTGGGTGATTTaGAGCCAAAGGACATACAGG +
Preference number: 4 (lower is better)
Translates to: LARRYVLGNQCEQSALSHGKWVI*SQRTYR
Trigger: CCTGTATGTCCTTTGGCTGCAAATCACCCACTTCCC...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCATGAGATGCTCGAGCTaGCTTTGCCCTCACTGCCGT +
Preference number: 4 (lower is better)
Translates to: QGFILWISLLILRVLNQLMRCSS*LCPHCR
Trigger: ACGGCAGTGAGGGCAAAGGCAGCTCGAGCATCTCAT...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR GCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGTCACGTCAGATGAGATaGTCGAGCTGCCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: TWKSALHSLVENTQTDMESRQMR*SSCLCP
Trigger: AGGGCAAAGGCAGCTCGAGCATCTCATCTGACGTGA...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR CCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGGGCACAGCTGGTTGGTaGGCAGGAAGGAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: CDTQILKLQIGSQVTELRGTAGW*AGRRRS
Trigger: AGATCTTCTCCTTCCTGCCCACCAACCAGCTGTGCC...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTAGCGGCACAGCTGGTTaGTGGGCAGGAAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSSGTAG*WAGRRR
Trigger: TCTTCTCCTTCCTGCCCACCAACCAGCTGTGCCGCT...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTAGTTCGGGGCAGCACTaGGCGATGGTGTACAGCCCT +
Preference number: 4 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTSSGQH*AMVYSP
Trigger: AGGGCTGTACACCATCGCCCAGTGCTGCCCCGAACT...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATGGGAAAGGGCGGCCTTaGGGGCCTGAGCGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: KINEGFQRNKGGAWLENNGKGRP*GPERRR
Trigger: TCTCCTCCGCTCAGGCCCCCAAGGCCGCCCTTTCCC...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGCCTCTGATTCAGTGCTaGAAGCTGCAGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CDTQILKLQIGSQVTELRPLIQC*KLQPRA
Trigger: TGCTCTGGGCTGCAGCTTCCAGCACTGAATCAGAGG...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGCCTCTGATTCAGTGCTaGAAGCTGCAGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWPLIQC*KLQPRA
Trigger: TGCTCTGGGCTGCAGCTTCCAGCACTGAATCAGAGG...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGCAGAATCAGTTCTCCTaGAAGAGGTCGATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TWKSALHSLVENTQTDMEQNQFS*KRSMPG
Trigger: CCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTG...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCACACGCAGACAGACATaGAGGAGGTACACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: QGFILWISLLILRVLNQLTRRQT*RRYTGW
Trigger: CCACCCTGTGTACCTCCTCCATGTCTGTCTGCGTGT...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATTGAAAGAAACCTCCTaGGCAGACACCACCTCATCA +
Preference number: 4 (lower is better)
Translates to: TSIHRISSPGRGRCLGALLKETS*ADTTSS
Trigger: TGATGAGGTGGTGTCTGCCCAGGAGGTTTCTTTCAA...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGTTTGCCATGCAAGGGTaGCAGTTTAATGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TWKSALHSLVENTQTDMEFAMQG*QFNGGL
Trigger: GAGGCCTCCATTAAACTGTCACCCTTGCATGGCAAA...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGCAAGGTCATAGTCATTaGCAGAGCTGGGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: CDTQILKLQIGSQVTELRQGHSH*QSWGRT
Trigger: AGTCCTCCCCCAGCTCTGTCAATGACTATGACCTTG...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGTCTGGCATTGTTGAGTaGACAGAATTTAAACACCTG +
Preference number: 4 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLSGIVE*TEFKHL
Trigger: CAGGTGTTTAAATTCTGTTCACTCAACAATGCCAGA...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTGGAGGCCATGATGTTTaGAAGAAACCTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: IGSQVTELRNAAFNFFHGGGHDV*KKPPGQ
Trigger: CTGCCCAGGAGGTTTCTTTCAAACATCATGGCCTCC...ACCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGGAAGACAGTTTAGGTaGTGCGGTCAGGGATTCATT +
Preference number: 4 (lower is better)
Translates to: EITSIHRISSPGRGRCLGGRQFR*CGQGFI
Trigger: AATGAATCCCTGACCGCATCACCTAAACTGTCTTCC...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTGGGCTGGGCTGGGCGTaGTCAGTGTGCGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLGLGWA*SVCACS
Trigger: TGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCC...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp GGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAAAACACCGGGAGCCGGTCTATaGTGGCCTGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GPCLLIKNCKGLYSYLKTPGAGL*WPAPSG
Trigger: CCCAGAAGGAGCAGGCCAGCATAGACCGGCTCCCGG...TGTTTTCAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTAGGAAGGAGAAGATCTaGACCATGGAGTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSRKEKI*TMEWSG
Trigger: CCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCT...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp GGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAAAACATGCGCCGCGATGGTGTaGAGGCCTTCGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPCLLIKNCKGLYSYLKTCAAMV*RPSSSS
Trigger: GCTGGAGGACGAAGGCCTGCACACCATCGCGGCGCA...TGTTTTCAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGCCCAGAGCAGTGAAGTaGTTTGGCCAAGGTCATAGT +
Preference number: 4 (lower is better)
Translates to: TWKSALHSLVENTQTDMEPRAVK*FGQGHS
Trigger: ACTATGACCTTGGCCAAAGCACTTCACTGCTCTGGG...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AGGACAGATGTGCCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACTCTCTGCTCCCTCAATaGTATAATGGACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: RTDVPDACQVCKARDQKNSLLPQ*YNGHEA
Trigger: AGCTTCATGTCCATTATAGCATTGAGGGAGCAGAGA...GTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGCCTGGAAGAGGTCGATaGCTGGGTGCTCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLPGRGR*LGALCQ
Trigger: TTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGG...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAGGGAAGTGGGTGATTTaGAGCCAAAGGACATACAGG +
Preference number: 4 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRGKWVI*SQRTYR
Trigger: CCTGTATGTCCTTTGGCTGCAAATCACCCACTTCCC...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGGATGCATGCCAGGTGTaGAAGGCGAGGGATCAGAAA +
Preference number: 4 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWDACQV*KARDQK
Trigger: TTTCTGATCCCTCGCCTTGCACACCTGGCATGCATC...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATCACAGAGCTGAGGAATaGTGCCTTCAACTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHHRAEE*CLQLLS
Trigger: TGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTG...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCTCCTGAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCTGCCTTTGCCCTCACTaGCGTACTGTTTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: SPEITSIHRISSPGRGRCCLCPH*RTVCHC
Trigger: ACAATGGCAAACAGTACGGCAGTGAGGGCAAAGGCA...GCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTCAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR CCA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTTGGACATATCAGGGCTaGGCTGGGCGTGCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTWTYQG*AGRAQC
Trigger: ACACTGAGCACGCCCAGCCCAGCCCTGATATGTCCA...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAGTTCGGGGCAGCACTaGGCGATGGTGTACAGCCCT +
Preference number: 4 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLSSGQH*AMVYSP
Trigger: AGGGCTGTACACCATCGCCCAGTGCTGCCCCGAACT...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AGAGTAAGCGCCTTGCTCAAGGAACAGCGATCAGCCTGCTTAAGTACATCTTTTGTTTGGTGCAGTTCTTaGCGAGGTACTCCACACCGT +
Preference number: 4 (lower is better)
Translates to: RVSALLKEQRSACLSTSFVWCSS*RGTPHR
Trigger: ACGGTGTGGAGTACCTCGCCAAGAACTGCACCAAAC...AAAAGATGTACTTAAGCAGGCTGATCGCTGTTCCTTGAGCAAGGCGCTTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTGAGACCTCGCAGTCCTaGACATTCAGCGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTETSQS*TFSVWR
Trigger: CCTCCAGACGCTGAATGTCCAGGACTGCGAGGTCTC...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCGAGGATGTGAGGAGGTaGGAGAGGAAATTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QGFILWISLLILRVLNQLEDVRR*ERKFSH
Trigger: GTGGGAGAATTTCCTCTCCCACCTCCTCACATCCTC...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTACACGCAGACAGACATaGAGGAGGTACACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSTRRQT*RRYTGW
Trigger: CCACCCTGTGTACCTCCTCCATGTCTGTCTGCGTGT...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATCTGCTTTGCATTCTTTaGTGGAAAACACGCAGACAG +
Preference number: 4 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHLLCIL*WKTRRQ
Trigger: CTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAG...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTGAATACAACGCCGGATaGACTCTGTCCCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: IGSQVTELRNAAFNFFHGEYNAG*TLSLQK
Trigger: CTTCTGAAGGGACAGAGTTCATCCGGCGTTGTATTC...ACCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATTGCCTACAAATGACCTaGCCAAAATGCCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LARRYVLGNQCEQSALSHCLQMT*PKCLFA
Trigger: AGCAAACAGGCATTTTGGTCAGGTCATTTGTAGGCA...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGGAAACTGCCTACAAATaGCCTGACCAAAATGCCTGT +
Preference number: 4 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLETAYK*PDQNAC
Trigger: ACAGGCATTTTGGTCAGGTCATTTGTAGGCAGTTTC...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGAGTGACTTAGGTCAATaGAGCAGTTTAGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLSDLGQ*SSLERR
Trigger: CCTCCTCTCTAAACTGCTTCATTGACCTAAGTCACT...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AGAGTAAGCGCCTTGCTCAAGGAACAGCGATCAGCCTGCTTAAGTACATCTTTTCACAAGTCACAGAGCTaGGGAATGCTGCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: RVSALLKEQRSACLSTSFHKSQS*GMLPST
Trigger: AGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTG...AAAAGATGTACTTAAGCAGGCTGATCGCTGTTCCTTGAGCAAGGCGCTTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGAGGAGGGACAATCCTTTGTaGCACCCAAATCCTGAAACT +
Preference number: 4 (lower is better)
Translates to: GSLLCILWWKTRRQTWRRRDNPL*HPNPET
Trigger: AGTTTCAGGATTTGGGTGTCACAAAGGATTGTCCCT...CCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAGGAGAACAGAATGGATaGACAGGAGACTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRGEQNG*TGDWEK
Trigger: TTTCTCCCAGTCTCCTGTTCATCCATTCTGTTCTCC...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AACCTTCCCGGAAGAAAGAGCTGTTTTGAGTGGGTGTCGGTGCTTACATACGCTTTGAGTGGGTGTCGGTaGTTACATACGCTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: NLPGRKSCFEWVSVLTYALSGCR*LHTLLL
Trigger: TAAAAGCAGCGTATGTAAGCACCGACACCCACTCAA...AGCGTATGTAAGCACCGACACCCACTCAAAACAGCTCTTTCTTCCGGGAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AGAGTAAGCGCCTTGCTCAAGGAACAGCGATCAGCCTGCTTAAGTACATCTTTTCCCAGAGCAGTGAAGTaGTTTGGCCAAGGTCATAGT +
Preference number: 4 (lower is better)
Translates to: RVSALLKEQRSACLSTSFPRAVK*FGQGHS
Trigger: ACTATGACCTTGGCCAAAGCACTTCACTGCTCTGGG...AAAAGATGTACTTAAGCAGGCTGATCGCTGTTCCTTGAGCAAGGCGCTTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTGGCAAGACGGTATGTaGTGGGCAATCAGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWWQDGM*WAISVN
Trigger: GTTCACACTGATTGCCCAGCACATACCGTCTTGCCA...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGTGGCAAGACGGTATGTaGTGGGCAATCAGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: CDTQILKLQIGSQVTELRWQDGM*WAISVN
Trigger: GTTCACACTGATTGCCCAGCACATACCGTCTTGCCA...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAGAAGATCTGCACCATaGAGTGGTCCGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLRRSAP*SGPGAG
Trigger: ACCGGCTCCCGGACCACTCCATGGTGCAGATCTTCT...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTGTTTGGTGCAGTTCTTaGCGAGGTACTCCACACCGT +
Preference number: 4 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLVWCSS*RGTPHR
Trigger: ACGGTGTGGAGTACCTCGCCAAGAACTGCACCAAAC...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGGAGACCTCGCAGTCCTaGACATTCAGCGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLETSQS*TFSVWR
Trigger: CCTCCAGACGCTGAATGTCCAGGACTGCGAGGTCTC...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGACTTGCTTCGTTTCTTTaGCCTCTGTTGCCCATGAGA +
Preference number: 4 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRLASFL*PLLPMR
Trigger: TCTCATGGGCAACAGAGGCCAAAGAAACGAAGCAAG...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTCCTTTCCAAGGGTCTaGTTGGTGGACCAGAGTCTA +
Preference number: 4 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWSFPRV*LVDQSL
Trigger: TAGACTCTGGTCCACCAACCAGACCCTTGGAAAGGA...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AACCTTCCCGGAAGAAAGAGCTGTTTTGAGTGGGTGTCGGTGCTTACATACGCTAACAAAGGTGGGGCTTaGCTAGAGAATAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: NLPGRKSCFEWVSVLTYANKGGA*LENNLG
Trigger: TCCCAGATTATTCTCTAGCCAAGCCCCACCTTTGTT...AGCGTATGTAAGCACCGACACCCACTCAAAACAGCTCTTTCTTCCGGGAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATAACAAAGGTGGGGCTTaGCTAGAGAATAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: LARRYVLGNQCEQSALSHNKGGA*LENNLG
Trigger: TCCCAGATTATTCTCTAGCCAAGCCCCACCTTTGTT...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTACAAATTCAGCATAACTaGCTTGGAGATGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TSIHRISSPGRGRCLGALQIQHN*LGDAEV
Trigger: AACCTCTGCATCTCCAAGCCAGTTATGCTGAATTTG...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGGAGAAAAGAAGAAACTaGCAAGACGGTATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLEKRRN*QDGMCW
Trigger: CCAGCACATACCGTCTTGCCAGTTTCTTCTTTTCTC...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTCCTCCCGGGTCAAGCTaGTGCAGGTCACTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLPPGSS*CRSLWS
Trigger: GCTCCAAAGTGACCTGCATCAGCTTGACCCGGGAGG...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTTTTGCCATGCAAGGGTaGCAGTTTAATGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSFAMQG*QFNGGL
Trigger: GAGGCCTCCATTAAACTGTCACCCTTGCATGGCAAA...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCAAGAAAGAGCTGTTTTaGGTGGGTGTCGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: QGFILWISLLILRVLNQLKKELF*VGVGAY
Trigger: GTAAGCACCGACACCCACTCAAAACAGCTCTTTCTT...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTCAAGGTCATAGTCATTaGCAGAGCTGGGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTQGHSH*QSWGRT
Trigger: AGTCCTCCCCCAGCTCTGTCAATGACTATGACCTTG...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATGGGCTGTGTGGCCTCTaGTTCAGTGCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: KINEGFQRNKGGAWLENNGLCGL*FSAGSC
Trigger: GCAGCTTCCAGCACTGAATCAGAGGCCACACAGCCC...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAAAACAGGGCTGTGTGGCCTCTaGTTCAGTGCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GPCLLIKNCKGLYSYLKTGLCGL*FSAGSC
Trigger: GCAGCTTCCAGCACTGAATCAGAGGCCACACAGCCC...TGTTTTCAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp CTGGCAAGACGGTATGTGCTGGGCAATCAGTGTGAACAGTCAGCTTTGTCTCATCAAATGCAATCTGAATaGCAAAGAACCGAGGCATCT +
Preference number: 4 (lower is better)
Translates to: LARRYVLGNQCEQSALSHQMQSE*QRTEAS
Trigger: AGATGCCTCGGTTCTTTGTCATTCAGATTGCATTTG...ATGAGACAAAGCTGACTGTTCACACTGATTGCCCAGCACATACCGTCTTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TCTCCTGAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCAGGTCAAATGCAATCTaGATGACAAAGAACCGAGGC +
Preference number: 4 (lower is better)
Translates to: SPEITSIHRISSPGRGRCRSNAI*MTKNRG
Trigger: GCCTCGGTTCTTTGTCATTCAGATTGCATTTGACCT...GCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTCAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTCACAAGTCACAGAGCTaGGGAATGCTGCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLHKSQS*GMLPST
Trigger: AGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTG...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGTCTCCAAAAATCTGCTaGGCTGTTTCCCCAGTAACC +
Preference number: 4 (lower is better)
Translates to: CDTQILKLQIGSQVTELRSPKIC*AVSPVT
Trigger: GGTTACTGGGGAAACAGCTCAGCAGATTTTTGGAGA...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTTGGGCGTGCTCAGTGTaGGCATGCTCAGGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLWACSV*ACSGRS
Trigger: ACTCCGACCTGAGCATGCGCACACTGAGCACGCCCA...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTAGAAATCTGTTTGCCATaGAAGGGTGACAGTTTAATG +
Preference number: 4 (lower is better)
Translates to: TSIHRISSPGRGRCLGALEICLP*KGDSLM
Trigger: CATTAAACTGTCACCCTTGCATGGCAAACAGATTTC...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGGTTTGCTGTTTGTCTTaGTTCGTTTCTTTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLVCCLS*FVSLAS
Trigger: AGAGGCCAAAGAAACGAAGCAAGACAAACAGCAAAC...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGTGTATGGGTATCTCTaGTCCCTCAATGCTATAATG +
Preference number: 4 (lower is better)
Translates to: EITSIHRISSPGRGRCLGVYGYL*SLNAIM
Trigger: CATTATAGCATTGAGGGAGCAGAGATACCCATACAC...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAGGTCGATGCCTGGGTaGTCTATGCCAAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLRSMPG*SMPRCF
Trigger: GAAGCACCTTGGCATAGAGCACCCAGGCATCGACCT...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGATACAGGACCCTTTATaGACTGATGCTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: CDTQILKLQIGSQVTELRIQDPL*TDAGTA
Trigger: TGCAGTGCCAGCATCAGTGCATAAAGGGTCCTGTAT...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTCAGAAGACGACAGTATaGACAGGAGCCTACAGTAGG +
Preference number: 4 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSQKTTV*TGAYSR
Trigger: CCTACTGTAGGCTCCTGTGCATACTGTCGTCTTCTG...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGTCCATTCTGAAATCCTaGGAGATTCGGTGGACATAT +
Preference number: 4 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLSILKS*EIRWTY
Trigger: ATATGTCCACCGAATCTCCCAGGATTTCAGAATGGA...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTTGGACATTCAGCGTCTaGAGGTCAAAGCAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTWTFSV*RSKQLA
Trigger: CGCCAACTGCTTTGACCTCCAGACGCTGAATGTCCA...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCTCCTGAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCAAGAGCTGTTTTGAGTaGGTGTCGGTGCTTACATAC +
Preference number: 4 (lower is better)
Translates to: SPEITSIHRISSPGRGRCKSCFE*VSVLTY
Trigger: GTATGTAAGCACCGACACCCACTCAAAACAGCTCTT...GCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTCAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AGGACAGATGTGCCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACCAGAATTTAAACACCTaGAAGTCTGCTTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: RTDVPDACQVCKARDQKNQNLNT*KSALHS
Trigger: AGAATGCAAAGCAGACTTCCAGGTGTTTAAATTCTG...GTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGTTGAAAGAAACCTCCTaGGCAGACACCACCTCATCA +
Preference number: 4 (lower is better)
Translates to: CDTQILKLQIGSQVTELRLKETS*ADTTSS
Trigger: TGATGAGGTGGTGTCTGCCCAGGAGGTTTCTTTCAA...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGCAGGGATTCATTCTCTaGATCTCCCTGCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: CDTQILKLQIGSQVTELRQGFIL*ISLLIL
Trigger: GAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTTGTTCAGGTTTGTGTaGATACAACGCCGGATGAAC +
Preference number: 4 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWLFRFV*IQRRMN
Trigger: GTTCATCCGGCGTTGTATTCACACAAACCTGAACAA...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGAGGTCTGGCATTGTTGAGTaGACAGAATTTAAACACCTG +
Preference number: 4 (lower is better)
Translates to: GSLLCILWWKTRRQTWRRSGIVE*TEFKHL
Trigger: CAGGTGTTTAAATTCTGTTCACTCAACAATGCCAGA...CCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTTCTCCAAAAATCTGCTaGGCTGTTTCCCCAGTAACC +
Preference number: 4 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSSPKIC*AVSPVT
Trigger: GGTTACTGGGGAAACAGCTCAGCAGATTTTTGGAGA...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp CAGGGATTCATTCTCTGGATCTCCCTGCTCATTCTCAGAGTATTAAACCAGCTCGGATGGAAATCTGTTTaGCATGCAAGGGTGACAGTT +
Preference number: 4 (lower is better)
Translates to: QGFILWISLLILRVLNQLGWKSV*HARVTV
Trigger: AACTGTCACCCTTGCATGGCAAACAGATTTCCATCC...GAGCTGGTTTAATACTCTGAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATATGATGGATCCTCGCTaGTGCTCTAGGGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KINEGFQRNKGGAWLENNMMDPR*CSREGG
Trigger: CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCAT...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAAAACACCTGGAAGTCTaGTTTGCATTCTTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRKHLEV*FAFFGG
Trigger: TCCACCAAAGAATGCAAAGCAGACTTCCAGGTGTTT...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCTCCTGAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCGAGATGCAGAGGTTCTaGATTTGGATAATGGGCATT +
Preference number: 4 (lower is better)
Translates to: SPEITSIHRISSPGRGRCEMQRF*IWIMGI
Trigger: AATGCCCATTATCCAAATGCAGAACCTCTGCATCTC...GCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTCAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTAAGAGCTGTTTTGAGTaGGTGTCGGTGCTTACATAC +
Preference number: 4 (lower is better)
Translates to: IGSQVTELRNAAFNFFHGKSCFE*VSVLTY
Trigger: GTATGTAAGCACCGACACCCACTCAAAACAGCTCTT...ACCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTCTTGCTTCGTTTCTTTaGCCTCTGTTGCCCATGAGA +
Preference number: 4 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSLASFL*PLLPMR
Trigger: TCTCATGGGCAACAGAGGCCAAAGAAACGAAGCAAG...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAAGGAGGTACACAGGGTaGCAATTTGCACAATTAAAC +
Preference number: 4 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRRRYTG*QFAQLN
Trigger: GTTTAATTGTGCAAATTGCCACCCTGTGTACCTCCT...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTACAATGGAATTTCTTCTaGCTATCTGACTTCATGCAA +
Preference number: 4 (lower is better)
Translates to: TSIHRISSPGRGRCLGALQWNFF*LSDFMQ
Trigger: TTGCATGAAGTCAGATAGCCAGAAGAAATTCCATTG...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AACCTTCCCGGAAGAAAGAGCTGTTTTGAGTGGGTGTCGGTGCTTACATACGCTATGATGTTGATTGGATaGGAGGCCATGATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: NLPGRKSCFEWVSVLTYAMMLIG*EAMMFE
Trigger: TTCAAACATCATGGCCTCCCATCCAATCAACATCAT...AGCGTATGTAAGCACCGACACCCACTCAAAACAGCTCTTTCTTCCGGGAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGCAAGACGGTATGTGCTaGGCAATCAGTGTGAACAGT +
Preference number: 4 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLQDGMC*AISVNS
Trigger: ACTGTTCACACTGATTGCCCAGCACATACCGTCTTG...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGCAAGGGAGAACAGAATaGATGAACAGGAGACTGGGA +
Preference number: 4 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLQGRTE*MNRRLG
Trigger: TCCCAGTCTCCTGTTCATCCATTCTGTTCTCCCTTG...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 72 bp CGACAGTATGCACAGGAGCCTACAGTAGGAGTGCAGTaGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATA +
Preference number: 4 (lower is better)
Translates to: RQYAQEPTVGVQ*SRVSKFDKFSI
Trigger: TATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCCTACTGTAGGCTCCTGTGCATACTGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTCACTTTGGAGCATCCTaGCACATCCAGGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLHFGAS*HIQVLQ
Trigger: CTGGAGCACCTGGATGTGTCAGGATGCTCCAAAGTG...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGTTGTTCAGGTTTGTGTaGATACAACGCCGGATGAAC +
Preference number: 4 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLLFRFV*IQRRMN
Trigger: GTTCATCCGGCGTTGTATTCACACAAACCTGAACAA...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGTGCCTACAAATGACCTaGCCAAAATGCCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLCLQMT*PKCLFA
Trigger: AGCAAACAGGCATTTTGGTCAGGTCATTTGTAGGCA...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTAGTGACTTAGGTCAATaGAGCAGTTTAGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSSDLGQ*SSLERR
Trigger: CCTCCTCTCTAAACTGCTTCATTGACCTAAGTCACT...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTGATCAGAAAAACTTTTaGGGACATGTGTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: IGSQVTELRNAAFNFFHGDQKNF*GHVFPW
Trigger: CCAAGGGAACACATGTCCTCAAAAGTTTTTCTGATC...ACCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGGATCAGAAAAACTTTTaGGGACATGTGTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: CDTQILKLQIGSQVTELRDQKNF*GHVFPW
Trigger: CCAAGGGAACACATGTCCTCAAAAGTTTTTCTGATC...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTCAAATGCAATCTGAATaGCAAAGAACCGAGGCATCT +
Preference number: 4 (lower is better)
Translates to: IGSQVTELRNAAFNFFHGQMQSE*QRTEAS
Trigger: AGATGCCTCGGTTCTTTGTCATTCAGATTGCATTTG...ACCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTTTCTTCTGGCTATCTaGCTTCATGCAAATGAGGCT +
Preference number: 4 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWFLLAI*LHANEA
Trigger: AGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAA...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATCCTGACACATCCAGGTaGTCCAGATTAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KINEGFQRNKGGAWLENNPDTSR*SRLGQR
Trigger: CCTCTGCCCTAATCTGGAGCACCTGGATGTGTCAGG...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGTTGAGTGGGTGTCGGTaGTTACATACGCTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLLSGCR*LHTLLL
Trigger: TAAAAGCAGCGTATGTAAGCACCGACACCCACTCAA...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGGTTTGCTGTTTGTCTTaGTTCGTTTCTTTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWVCCLS*FVSLAS
Trigger: AGAGGCCAAAGAAACGAAGCAAGACAAACAGCAAAC...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAACCAAAATGCCTGTTTaGTGTTTGTCTTGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRTKMPV*CLSCFV
Trigger: AACGAAGCAAGACAAACAGCAAACAGGCATTTTGGT...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTTTTGCCTATGCAAAGTaGTATGGTATTGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: EITSIHRISSPGRGRCLGFAYAK*YGIELT
Trigger: TGTCAACTCAATACCATAGCACTTTGCATAGGCAAA...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp ATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTTCTCTGCTCCCTCAATaGTATAATGGACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: IGSQVTELRNAAFNFFHGSLLPQ*YNGHEA
Trigger: AGCTTCATGTCCATTATAGCATTGAGGGAGCAGAGA...ACCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTTGTCCAGGTAGCGGATaGAAATCTGTTTGCCATGCA +
Preference number: 4 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTCPGSG*KSVCHA
Trigger: TGCATGGCAAACAGATTTCCATCCGCTACCTGGACA...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTCATGAAGCTAATCTTTaGGCTGTGTGGCCTCTGATT +
Preference number: 4 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLHEANL*AVWPLI
Trigger: AATCAGAGGCCACACAGCCCAAAGATTAGCTTCATG...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATGAAGAGGTCGATGCCTaGGTGCTCTATGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: KINEGFQRNKGGAWLENNEEVDA*VLYAKV
Trigger: CACCTTGGCATAGAGCACCCAGGCATCGACCTCTTC...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AGAGTAAGCGCCTTGCTCAAGGAACAGCGATCAGCCTGCTTAAGTACATCTTTTCTTTGCATTCTTTGGTaGAAAACACGCAGACAGACA +
Preference number: 4 (lower is better)
Translates to: RVSALLKEQRSACLSTSFLCILW*KTRRQT
Trigger: TGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAG...AAAAGATGTACTTAAGCAGGCTGATCGCTGTTCCTTGAGCAAGGCGCTTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTCTGCTTTGCATTCTTTaGTGGAAAACACGCAGACAG +
Preference number: 4 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLLLCIL*WKTRRQ
Trigger: CTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAG...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCTCCTGAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCATGATGTTGATTGGATaGGAGGCCATGATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SPEITSIHRISSPGRGRCMMLIG*EAMMFE
Trigger: TTCAAACATCATGGCCTCCCATCCAATCAACATCAT...GCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTCAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGGATTCATTTCCCCCATaGCACAGAGCCTTGATTACA +
Preference number: 4 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLDSFPP*HRALIT
Trigger: TGTAATCAAGGCTCTGTGCCATGGGGGAAATGAATC...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 72 bp CAGAATTTAAACACCTGGAAGTCTGCTTTGCATTCTTaGGTGGAAAACACGCAGACAGACATGGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: QNLNTWKSALHS*VENTQTDMEEV
Trigger: TACCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGTGTTTAAATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 72 bp AGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTaGGAGATGCAGAGGTTCTGCATTTGGATAATGGGC +
Preference number: 4 (lower is better)
Translates to: RVSKFDKFSITG*EMQRFCIWIMG
Trigger: GCCCATTATCCAAATGCAGAACCTCTGCATCTCCAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAAAAGTGCTATGGTATTaGGTTGACAAGAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRKVLWY*VDKNVH
Trigger: ATGGACATTCTTGTCAACTCAATACCATAGCACTTT...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTTTCTTCTGGCTATCTaGCTTCATGCAAATGAGGCT +
Preference number: 4 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLFLLAI*LHANEA
Trigger: AGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAA...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGTTGGATGGGAGGCCATaGTGTTTGAAAGAAACCTCC +
Preference number: 4 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLLDGRP*CLKETS
Trigger: GGAGGTTTCTTTCAAACATCATGGCCTCCCATCCAA...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGACCAAAATGCCTGTTTaGTGTTTGTCTTGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: CDTQILKLQIGSQVTELRTKMPV*CLSCFV
Trigger: AACGAAGCAAGACAAACAGCAAACAGGCATTTTGGT...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTAAACACCTGGAAGTCTaGTTTGCATTCTTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLKHLEV*FAFFGG
Trigger: TCCACCAAAGAATGCAAAGCAGACTTCCAGGTGTTT...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGCAAAGACGGCCTCGTTaGAGATATTGTAACAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLQRRPR*RYCNSL
Trigger: CAGGCTGTTACAATATCTCCAACGAGGCCGTCTTTG...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTTGGACATTCAGCGTCTaGAGGTCAAAGCAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLWTFSV*RSKQLA
Trigger: CGCCAACTGCTTTGACCTCCAGACGCTGAATGTCCA...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGCGTGAAAACCAGCAATaGAATTTCTTCTGGCTATCT +
Preference number: 4 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWRENQQ*NFFWLS
Trigger: AGATAGCCAGAAGAAATTCCATTGCTGGTTTTCACG...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTCAGAGGTTCTGCATTTaGATAATGGGCATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: IGSQVTELRNAAFNFFHGQRFCI*IMGILR
Trigger: TCTCAAAATGCCCATTATCCAAATGCAGAACCTCTG...ACCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGCAAATTCAGCATAACTaGCTTGGAGATGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLQIQHN*LGDAEV
Trigger: AACCTCTGCATCTCCAAGCCAGTTATGCTGAATTTG...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp ATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGTTTTGATGATGTTGATTaGATGGGAGGCCATGATGTT +
Preference number: 4 (lower is better)
Translates to: IGSQVTELRNAAFNFFHGFDDVD*MGGHDV
Trigger: AACATCATGGCCTCCCATCCAATCAACATCATCAAA...ACCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 72 bp TCTCAGTGTGTTCCCTCTTCCATTCATCTGGCATTGTaGAGTGAACAGAATTTAAACACCTGGAAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SQCVPSSIHLAL*SEQNLNTWKSA
Trigger: AGCAGACTTCCAGGTGTTTAAATTCTGTTCACTCAACAATGCCAGATGAATGGAAGAGGGAACACACTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATACACAGGGAAGTGGGTaGTTTGCAGCCAAAGGACAT +
Preference number: 4 (lower is better)
Translates to: KINEGFQRNKGGAWLENNTQGSG*FAAKGH
Trigger: ATGTCCTTTGGCTGCAAATCACCCACTTCCCTGTGT...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAAAACACCTGGCCTAGCTAAATaGTTCATTTCCCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: GPCLLIKNCKGLYSYLKTPGLAK*FISPMA
Trigger: TGCCATGGGGGAAATGAATCATTTAGCTAGGCCAGG...TGTTTTCAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATCCTGGCCTAGCTAAATaGTTCATTTCCCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: KINEGFQRNKGGAWLENNPGLAK*FISPMA
Trigger: TGCCATGGGGGAAATGAATCATTTAGCTAGGCCAGG...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATGCTGGGCAATCAGTGTaGACAGTCAGCTTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: KINEGFQRNKGGAWLENNAGQSV*TVSFVS
Trigger: TGAGACAAAGCTGACTGTTCACACTGATTGCCCAGC...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTGAAATCTGTTTGCCATaGAAGGGTGACAGTTTAATG +
Preference number: 4 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLEICLP*KGDSLM
Trigger: CATTAAACTGTCACCCTTGCATGGCAAACAGATTTC...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTGAGATGCAGAGGTTCTaGATTTGGATAATGGGCATT +
Preference number: 4 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTEMQRF*IWIMGI
Trigger: AATGCCCATTATCCAAATGCAGAACCTCTGCATCTC...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp GGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAAAACACAGAAGACGACAGTATaGACAGGAGCCTACAGTAGG +
Preference number: 4 (lower is better)
Translates to: GPCLLIKNCKGLYSYLKTQKTTV*TGAYSR
Trigger: CCTACTGTAGGCTCCTGTGCATACTGTCGTCTTCTG...TGTTTTCAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGCACAGAGCTGAGGAATaGTGCCTTCAACTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLHRAEE*CLQLLS
Trigger: TGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTG...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTAGGAGGTACACAGGGTaGCAATTTGCACAATTAAAC +
Preference number: 4 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTRRYTG*QFAQLN
Trigger: GTTTAATTGTGCAAATTGCCACCCTGTGTACCTCCT...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AGAGTAAGCGCCTTGCTCAAGGAACAGCGATCAGCCTGCTTAAGTACATCTTTTCAGAATTTAAACACCTaGAAGTCTGCTTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: RVSALLKEQRSACLSTSFQNLNT*KSALHS
Trigger: AGAATGCAAAGCAGACTTCCAGGTGTTTAAATTCTG...AAAAGATGTACTTAAGCAGGCTGATCGCTGTTCCTTGAGCAAGGCGCTTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGCAGAGGTTCTGCATTTaGATAATGGGCATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLQRFCI*IMGILR
Trigger: TCTCAAAATGCCCATTATCCAAATGCAGAACCTCTG...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 72 bp TTGAGTGAACAGAATTTAAACACCTGGAAGTCTGCTTaGCATTCTTTGGTGGAAAACACGCAGACAGACATG +
Preference number: 4 (lower is better)
Translates to: LSEQNLNTWKSA*HSLVENTQTDM
Trigger: CATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGTGTTTAAATTCTGTTCACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
3UTR CAA 72 bp TCATCTCAGTGTGTTCCCTCTTCCATTCATCTGGCATaGTTGAGTGAACAGAATTTAAACACCTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SSQCVPSSIHLA*LSEQNLNTWKS
Trigger: AGACTTCCAGGTGTTTAAATTCTGTTCACTCAACAATGCCAGATGAATGGAAGAGGGAACACACTGAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGGAACAGCGATCAGCCTaGTTAAGTACATCTTTTGTG +
Preference number: 4 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLEQRSA*LSTSFV
Trigger: CACAAAAGATGTACTTAAGCAGGCTGATCGCTGTTC...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGTCCATTCTGAAATCCTaGGAGATTCGGTGGACATAT +
Preference number: 4 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLSILKS*EIRWTY
Trigger: ATATGTCCACCGAATCTCCCAGGATTTCAGAATGGA...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTTGTCCAGGTAGCGGATaGAAATCTGTTTGCCATGCA +
Preference number: 4 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLCPGSG*KSVCHA
Trigger: TGCATGGCAAACAGATTTCCATCCGCTACCTGGACA...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTCGTGAAAACCAGCAATaGAATTTCTTCTGGCTATCT +
Preference number: 4 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTRENQQ*NFFWLS
Trigger: AGATAGCCAGAAGAAATTCCATTGCTGGTTTTCACG...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATCAGGGATTCATTCTCTaGATCTCCCTGCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: KINEGFQRNKGGAWLENNQGFIL*ISLLIL
Trigger: GAGAATGAGCAGGGAGATCCAGAGAATGAATCCCTG...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTCAAGACGGTATGTGCTaGGCAATCAGTGTGAACAGT +
Preference number: 4 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLQDGMC*AISVNS
Trigger: ACTGTTCACACTGATTGCCCAGCACATACCGTCTTG...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp GGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAAAACACAAGGGAGAACAGAATaGATGAACAGGAGACTGGGA +
Preference number: 4 (lower is better)
Translates to: GPCLLIKNCKGLYSYLKTQGRTE*MNRRLG
Trigger: TCCCAGTCTCCTGTTCATCCATTCTGTTCTCCCTTG...TGTTTTCAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR TCA 90 bp GGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAAAACAAGGTCAAATGCAATCTaGATGACAAAGAACCGAGGC +
Preference number: 4 (lower is better)
Translates to: GPCLLIKNCKGLYSYLKTRSNAI*MTKNRG
Trigger: GCCTCGGTTCTTTGTCATTCAGATTGCATTTGACCT...TGTTTTCAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGTGTTCCCTTGGGCCTTaGTTGTTAATTAAAAATTGC +
Preference number: 4 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLCSLGP*LLIKNC
Trigger: GCAATTTTTAATTAACAAGCAAGGCCCAAGGGAACA...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CCA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGCAATGGAATTTCTTCTaGCTATCTGACTTCATGCAA +
Preference number: 4 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLQWNFF*LSDFMQ
Trigger: TTGCATGAAGTCAGATAGCCAGAAGAAATTCCATTG...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATTTTGCCTATGCAAAGTaGTATGGTATTGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: KINEGFQRNKGGAWLENNFAYAK*YGIELT
Trigger: TGTCAACTCAATACCATAGCACTTTGCATAGGCAAA...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR GCA 90 bp AAAATAAATGAGGGATTTCAACGTAACAAAGGTGGGGCTTGGCTAGAGAATAATTGTTCCCTTGGGCCTTaGTTGTTAATTAAAAATTGC +
Preference number: 4 (lower is better)
Translates to: KINEGFQRNKGGAWLENNCSLGP*LLIKNC
Trigger: GCAATTTTTAATTAACAAGCAAGGCCCAAGGGAACA...ATTATTCTCTAGCCAAGCCCCACCTTTGTTACGTTGAAATCCCTCATTTATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS TCA 90 bp GGCCTTCGTCGGTCAGGCGGACGCAGCGGCGCAGGTAGAGGTGGGTaGGCTGCGTGCAGTGCGCCGCGATGGTGTGCAGGCCTTCGTCCT +
Preference number: 5 (lower is better)
Translates to: GLRRSGGRSGAGRGG*AACSAPRWCAGLRP
Trigger: AGGACGAAGGCCTGCACACCATCGCGGCGCACTGCACGCAGCTCACCCACCTCTACCTGCGCCGCTGCGTCCGCCTGACCGACGAAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS TCA 90 bp GCAGCTTGCTGCAGTACTTGGCCACGTAGCGGATGCCCACGTCGGTaGCCCGGCCGCAGTGCGCGATGCTCAGGTACCGCAGGCGGGACT +
Preference number: 5 (lower is better)
Translates to: AACCSTWPRSGCPRR*PGRSARCSGTAGGT
Trigger: AGTCCCGCCTGCGGTACCTGAGCATCGCGCACTGCGGCCGGGTCACCGACGTGGGCATCCGCTACGTGGCCAAGTACTGCAGCAAGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 90 bp TGTACCAGCGGCGGCACACTCGCGCGCAGCGGCACAGCTGGTTGGTaGGCAGGAAGGAGAAGATCTGCACCATGGAGTGGTCCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: CTSGGTLARSGTAGW*AGRRRSAPWSGPGA
Trigger: GGCTCCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTGTGCCGCTGCGCGCGAGTGTGCCGCCGCTGGTACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 90 bp GGTTGTACCAGCGGCGGCACACTCGCGCGCAGCGGCACAGCTGGTTaGTGGGCAGGAAGGAGAAGATCTGCACCATGGAGTGGTCCGGGA +
Preference number: 5 (lower is better)
Translates to: GCTSGGTLARSGTAG*WAGRRRSAPWSGPG
Trigger: TCCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTGTGCCGCTGCGCGCGAGTGTGCCGCCGCTGGTACAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 90 bp CGCAGGGCCTCCACGGAGACCTCGCAGTCCTGGACATTCAGCGTCTaGAGGTCAAAGCAGTTGGCGGCCACGATCTGCAAGCCCTGGCCG +
Preference number: 5 (lower is better)
Translates to: RRASTETSQSWTFSV*RSKQLAATICKPWP
Trigger: CGGCCAGGGCTTGCAGATCGTGGCCGCCAACTGCTTTGACCTCCAGACGCTGAATGTCCAGGACTGCGAGGTCTCCGTGGAGGCCCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS GCA 90 bp AAGATCTGCACCATGGAGTGGTCCGGGAGCCGGTCTATGCTGGCCTaGTCCTTCTGGGGTCTGGAGGCGAGCCGGATGAGCGGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: KICTMEWSGSRSMLA*SFWGLEASRMSGCV
Trigger: CACACACCCGCTCATCCGGCTCGCCTCCAGACCCCAGAAGGAGCAGGCCAGCATAGACCGGCTCCCGGACCACTCCATGGTGCAGATCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 90 bp AGCGGCACAGCTGGTTGGTGGGCAGGAAGGAGAAGATCTGCACCATaGAGTGGTCCGGGAGCCGGTCTATGCTGGCCTGCTCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: SGTAGWWAGRRRSAP*SGPGAGLCWPAPSG
Trigger: CCCAGAAGGAGCAGGCCAGCATAGACCGGCTCCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTGTGCCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 90 bp AGCGTCTGGAGGTCAAAGCAGTTGGCGGCCACGATCTGCAAGCCCTaGCCGGTGATGCTCTCGCAGGACTTGAGGCTGAGCCGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: SVWRSKQLAATICKP*PVMLSQDLRLSRLR
Trigger: CCTCAAGCGGCTCAGCCTCAAGTCCTGCGAGAGCATCACCGGCCAGGGCTTGCAGATCGTGGCCGCCAACTGCTTTGACCTCCAGACGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 90 bp CACAGCTGGTTGGTGGGCAGGAAGGAGAAGATCTGCACCATGGAGTaGTCCGGGAGCCGGTCTATGCTGGCCTGCTCCTTCTGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: HSWLVGRKEKICTME*SGSRSMLACSFWGL
Trigger: CAGACCCCAGAAGGAGCAGGCCAGCATAGACCGGCTCCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 90 bp CAGAAGAAAGCCGGGTTGGTGTGCTCGATGACGCAGCGCTTGCAGTaGCGTTTGACAAAGCGCAGGGCCTCCACGGAGACCTCGCAGTCC +
Preference number: 5 (lower is better)
Translates to: QKKAGLVCSMTQRLQ*RLTKRRASTETSQS
Trigger: GGACTGCGAGGTCTCCGTGGAGGCCCTGCGCTTTGTCAAACGCCACTGCAAGCGCTGCGTCATCGAGCACACCAACCCGGCTTTCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS TCA 90 bp TCCCCGGTGATGGAGGACGAGGAGGTGGACGAGCCCCTTCCATTCTaGAATCCTGGGAGATTCGGTGGACATATCAGGGCTGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SPVMEDEEVDEPLPF*NPGRFGGHIRAGLG
Trigger: GCCCAGCCCAGCCCTGATATGTCCACCGAATCTCCCAGGATTTCAGAATGGAAGGGGCTCGTCCACCTCCTCGTCCTCCATCACCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS GCA 90 bp TGGACATTCAGCGTCTGGAGGTCAAAGCAGTTGGCGGCCACGATCTaGAAGCCCTGGCCGGTGATGCTCTCGCAGGACTTGAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: WTFSVWRSKQLAATI*KPWPVMLSQDLRLS
Trigger: GCTCAGCCTCAAGTCCTGCGAGAGCATCACCGGCCAGGGCTTGCAGATCGTGGCCGCCAACTGCTTTGACCTCCAGACGCTGAATGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 90 bp CTGACAGTTACGGTTTCCAGCATGAGACACACGTTGGGGGTGTCCTaGCAGAGTCTGCGGGTCAGCACCTTGAGGGCGCGGTCCACGTTG +
Preference number: 5 (lower is better)
Translates to: LTVTVSSMRHTLGVS*QSLRVSTLRARSTL
Trigger: CAACGTGGACCGCGCCCTCAAGGTGCTGACCCGCAGACTCTGCCAGGACACCCCCAACGTGTGTCTCATGCTGGAAACCGTAACTGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 90 bp TGGCGTTTGACAAAGCGCAGGGCCTCCACGGAGACCTCGCAGTCCTaGACATTCAGCGTCTGGAGGTCAAAGCAGTTGGCGGCCACGATC +
Preference number: 5 (lower is better)
Translates to: WRLTKRRASTETSQS*TFSVWRSKQLAATI
Trigger: GATCGTGGCCGCCAACTGCTTTGACCTCCAGACGCTGAATGTCCAGGACTGCGAGGTCTCCGTGGAGGCCCTGCGCTTTGTCAAACGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 90 bp GGAGGTGGACGAGCCCCTTCCATTCTGAAATCCTGGGAGATTCGGTaGACATATCAGGGCTGGGCTGGGCGTGCTCAGTGTGCGCATGCT +
Preference number: 5 (lower is better)
Translates to: GGGRAPSILKSWEIR*TYQGWAGRAQCAHA
Trigger: AGCATGCGCACACTGAGCACGCCCAGCCCAGCCCTGATATGTCCACCGAATCTCCCAGGATTTCAGAATGGAAGGGGCTCGTCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 90 bp GATGGAGGACGAGGAGGTGGACGAGCCCCTTCCATTCTGAAATCCTaGGAGATTCGGTGGACATATCAGGGCTGGGCTGGGCGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: DGGRGGGRAPSILKS*EIRWTYQGWAGRAQ
Trigger: CTGAGCACGCCCAGCCCAGCCCTGATATGTCCACCGAATCTCCCAGGATTTCAGAATGGAAGGGGCTCGTCCACCTCCTCGTCCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 90 bp CATTCTGAAATCCTGGGAGATTCGGTGGACATATCAGGGCTGGGCTaGGCGTGCTCAGTGTGCGCATGCTCAGGTCGGAGTCTTCGCTGG +
Preference number: 5 (lower is better)
Translates to: HSEILGDSVDISGLG*ACSVCACSGRSLRW
Trigger: CCAGCGAAGACTCCGACCTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCCTGATATGTCCACCGAATCTCCCAGGATTTCAGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504595.2
ENST00000510662.1
CDS-3UTR CAA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATAGGGCGCGGTCCACGTaGATGGTCTCGCCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHRARST*MVSPVR
Trigger: CCTGACGGGCGAGACCATCAACGTGGACCGCGCCCT...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTAGGCGGGACTCCAGCTaGGCGATCTCCCGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: EITSIHRISSPGRGRCLGRRDSS*AISRRP
Trigger: CGGCCTGCGGGAGATCGCCAAGCTGGAGTCCCGCCT...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS CCA 90 bp CCTTCCATTCTGAAATCCTGGGAGATTCGGTGGACATATCAGGGCTaGGCTGGGCGTGCTCAGTGTGCGCATGCTCAGGTCGGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: PSILKSWEIRWTYQG*AGRAQCAHAQVGVF
Trigger: GAAGACTCCGACCTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCCTGATATGTCCACCGAATCTCCCAGGATTTCAGAATGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504595.2
ENST00000510662.1
CDS-3UTR CAA 90 bp AACCTTCCCGGAAGAAAGAGCTGTTTTGAGTGGGTGTCGGTGCTTACATACGCTGGGTCCCAGGCCAGGTaGTACCAGCGGCGGCACACT +
Preference number: 5 (lower is better)
Translates to: NLPGRKSCFEWVSVLTYAGSQAR*YQRRHT
Trigger: AGTGTGCCGCCGCTGGTACAACCTGGCCTGGGACCC...AGCGTATGTAAGCACCGACACCCACTCAAAACAGCTCTTTCTTCCGGGAAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGTGGAGGTCAAAGCAGTaGGCGGCCACGATCTGCAAG +
Preference number: 5 (lower is better)
Translates to: ESTVILMMDPRCCSREGGWRSKQ*AATICK
Trigger: CTTGCAGATCGTGGCCGCCAACTGCTTTGACCTCCA...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS TCA 90 bp GGACACCACATCAAAGACGGCCTCGTTGGAGATATTGTAACAGCCTaGGACTTCCAGTCGCCTCAGTTCGGGGCAGCACTGGGCGATGGT +
Preference number: 5 (lower is better)
Translates to: GHHIKDGLVGDIVTA*DFQSPQFGAALGDG
Trigger: ACCATCGCCCAGTGCTGCCCCGAACTGAGGCGACTGGAAGTCTCAGGCTGTTACAATATCTCCAACGAGGCCGTCTTTGATGTGGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS TCA 90 bp GGCCCGTGTCGGATACCAAAGGGCATTTGCCGATATCCAGGGATTTaGGTTTGGTGCAGTTCTTGGCGAGGTACTCCACACCGTGGTCCG +
Preference number: 5 (lower is better)
Translates to: GPCRIPKGICRYPGI*VWCSSWRGTPHRGP
Trigger: CGGACCACGGTGTGGAGTACCTCGCCAAGAACTGCACCAAACTCAAATCCCTGGATATCGGCAAATGCCCTTTGGTATCCGACACGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS-3UTR CAA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAGGCGGGACTCCAGCTaGGCGATCTCCCGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: CDTQILKLQIGSQVTELRRRDSS*AISRRP
Trigger: CGGCCTGCGGGAGATCGCCAAGCTGGAGTCCCGCCT...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGCAGAAGAAAGCCGGGTaGGTGTGCTCGATGACGCAG +
Preference number: 5 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLQKKAG*VCSMTQ
Trigger: CTGCGTCATCGAGCACACCAACCCGGCTTTCTTCTG...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTACTGAGCCGCTTGAGGTaGAAGCAGTTCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: TSIHRISSPGRGRCLGALLSRLR*KQFRAR
Trigger: CCTGGCCCTGAACTGCTTCAACCTCAAGCGGCTCAG...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTCGCTTGCAGTGGCGTTaGACAAAGCGCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: EITSIHRISSPGRGRCLGRLQWR*TKRRAS
Trigger: GGAGGCCCTGCGCTTTGTCAAACGCCACTGCAAGCG...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGTTTCCAAGGGTCTGGTaGGTGGACCAGAGTCTAAGT +
Preference number: 5 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGFPRVW*VDQSLS
Trigger: ACTTAGACTCTGGTCCACCAACCAGACCCTTGGAAA...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp CTGGGCTTTGCTGTGATTAGGTGTGCTGGTGCCTCGCTAGGATGGTGTGGAGGGGATACCAAAGGGCATTaGCCGATATCCAGGGATTTG +
Preference number: 5 (lower is better)
Translates to: LGFAVIRCAGASLGWCGGDTKGH*PISRDL
Trigger: CAAATCCCTGGATATCGGCAAATGCCCTTTGGTATC...CCCTCCACACCATCCTAGCGAGGCACCAGCACACCTAATCACAGCAAAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGATGCTCTCGCAGGACTaGAGGCTGAGCCGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLMLSQD*RLSRLR
Trigger: CCTCAAGCGGCTCAGCCTCAAGTCCTGCGAGAGCAT...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp GCCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTATGCTCTCGCAGGACTaGAGGCTGAGCCGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: ARCARRGIRKTFEDMCSLMLSQD*RLSRLR
Trigger: CCTCAAGCGGCTCAGCCTCAAGTCCTGCGAGAGCAT...AAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGGAGGTCAAAGCAGTaGGCGGCCACGATCTGCAAG +
Preference number: 5 (lower is better)
Translates to: TSIHRISSPGRGRCLGALWRSKQ*AATICK
Trigger: CTTGCAGATCGTGGCCGCCAACTGCTTTGACCTCCA...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGTCTTGCTTCGTTTCTTaGGCCTCTGTTGCCCATGAG +
Preference number: 5 (lower is better)
Translates to: ESTVILMMDPRCCSREGGSCFVS*ASVAHE
Trigger: CTCATGGGCAACAGAGGCCAAAGAAACGAAGCAAGA...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGCGCGGCGGCCACTTGTaGCGGGTCCCCGGAGCGAGT +
Preference number: 5 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLRGGHL*RVPGAS
Trigger: ACTCGCTCCGGGGACCCGCAACAAGTGGCCGCCGCG...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS TCA 90 bp CAAAGTTTCGAACAGGATGATAAGAGTTTCCTCCAGGCCACAGGCTaGATAGCTAGCCTGCATTCCTACCAGTCTGCAAGCGCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: QSFEQDDKSFLQATG*IASLHSYQSASAGP
Trigger: GGGGCCAGCGCTTGCAGACTGGTAGGAATGCAGGCTAGCTATTCAGCCTGTGGCCTGGAGGAAACTCTTATCATCCTGTTCGAAACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510662.1
CDS TCA 90 bp GAGTCTTCGCTGGTAGCCACATTCTTCTGGGCTTTAGTGGGCGTGTaGTCTGTACTTGAACTCACGTCAGATGAGATGCTCGAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: ESSLVATFFWALVGV*SVLELTSDEMLELP
Trigger: AGGCAGCTCGAGCATCTCATCTGACGTGAGTTCAAGTACAGATCACACGCCCACTAAAGCCCAGAAGAATGTGGCTACCAGCGAAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504595.2
ENST00000510662.1
CDS-3UTR CAA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGGGGTCCCAGGCCAGGTaGTACCAGCGGCGGCACACT +
Preference number: 5 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLGSQAR*YQRRHT
Trigger: AGTGTGCCGCCGCTGGTACAACCTGGCCTGGGACCC...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGGATACCAAAGGGCATTaGCCGATATCCAGGGATTTG +
Preference number: 5 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLDTKGH*PISRDL
Trigger: CAAATCCCTGGATATCGGCAAATGCCCTTTGGTATC...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCTCCTGAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCAGAAGAAAGCCGGGTaGGTGTGCTCGATGACGCAG +
Preference number: 5 (lower is better)
Translates to: SPEITSIHRISSPGRGRCQKKAG*VCSMTQ
Trigger: CTGCGTCATCGAGCACACCAACCCGGCTTTCTTCTG...GCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTCAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGTTGCTTTGTTCAGGTTaGTGTGAATACAACGCCGGA +
Preference number: 5 (lower is better)
Translates to: ESTVILMMDPRCCSREGGLLCSG*CEYNAG
Trigger: TCCGGCGTTGTATTCACACAAACCTGAACAAAGCAA...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATAGGAGAGTAAGCGCCTaGCTCAAGGAACAGCGATCA +
Preference number: 5 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHRRVSA*LKEQRS
Trigger: TGATCGCTGTTCCTTGAGCAAGGCGCTTACTCTCCT...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp AGGACAGATGTGCCTGATGCATGCCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTCCAAGGGTCTGGTaGGTGGACCAGAGTCTAAGT +
Preference number: 5 (lower is better)
Translates to: RTDVPDACQVCKARDQKNFPRVW*VDQSLS
Trigger: ACTTAGACTCTGGTCCACCAACCAGACCCTTGGAAA...GTTTTTCTGATCCCTCGCCTTGCACACCTGGCATGCATCAGGCACATCTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp GCCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTTCCAGGGATTTGAGTTaGGTGCAGTTCTTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: ARCARRGIRKTFEDMCSLSRDLS*VQFLAR
Trigger: CCTCGCCAAGAACTGCACCAAACTCAAATCCCTGGA...AAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGTTTCTTTGGCCTCTGTaGCCCATGAGAAATGAGGAA +
Preference number: 5 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLFLWPL*PMRNEE
Trigger: TTCCTCATTTCTCATGGGCAACAGAGGCCAAAGAAA...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTATGCCAAGGTGCTTCTGACAGTAGGAGTGCAGTaGTCAAGGGTGTCTAAGTTT +
Preference number: 5 (lower is better)
Translates to: SVLLEEVDAWVLYAKVLLTVGVQ*SRVSKF
Trigger: AAACTTAGACACCCTTGACAACTGCACTCCTACTGT...CAGAAGCACCTTGGCATAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTAGGGCGCGGTCCACGTaGATGGTCTCGCCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLRARST*MVSPVR
Trigger: CCTGACGGGCGAGACCATCAACGTGGACCGCGCCCT...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGCGGATGGAAATCTGTTaGCCATGCAAGGGTGACAGT +
Preference number: 5 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLRMEIC*PCKGDS
Trigger: ACTGTCACCCTTGCATGGCAAACAGATTTCCATCCG...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp GAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTCGGATGGAAATCTGTTaGCCATGCAAGGGTGACAGT +
Preference number: 5 (lower is better)
Translates to: EITSIHRISSPGRGRCLGRMEIC*PCKGDS
Trigger: ACTGTCACCCTTGCATGGCAAACAGATTTCCATCCG...ACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp GAGAGCACTGTGATTCTGATGATGGATCCTCGCTGCTGCTCTAGGGAGGGAGGGGGCCTTTACTCCTATTaGAAAACACTGAGTAAAAGC +
Preference number: 5 (lower is better)
Translates to: ESTVILMMDPRCCSREGGGLYSY*KTLSKS
Trigger: GCTTTTACTCAGTGTTTTCAAATAGGAGTAAAGGCC...CCCTCCCTCCCTAGAGCAGCAGCGAGGATCCATCATCAGAATCACAGTGCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp GGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGGAGGTTCAGCATAACTGGCTaGGAGATGCAGAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: GSLLCILWWKTRRQTWRRFSITG*EMQRFC
Trigger: GCAGAACCTCTGCATCTCCAAGCCAGTTATGCTGAA...CCTCCTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTAGCATGAGACACACGTaGGGGGTGTCCTGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTSMRHT*GVSWQS
Trigger: ACTCTGCCAGGACACCCCCAACGTGTGTCTCATGCT...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGCTGATGCAGGTCACTTaGGAGCATCCTGACACATCC +
Preference number: 5 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWLMQVT*EHPDTS
Trigger: GGATGTGTCAGGATGCTCCAAAGTGACCTGCATCAG...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGCTGAGCCGCTTGAGGTaGAAGCAGTTCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLLSRLR*KQFRAR
Trigger: CCTGGCCCTGAACTGCTTCAACCTCAAGCGGCTCAG...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp GGAGTGCAGTTGTCAAGGGTGTCTAAGTTTGACAAATTCAGCATAACTGGCTTGTCGATGACGCAGCGCTaGCAGTGGCGTTTGACAAAG +
Preference number: 5 (lower is better)
Translates to: GVQLSRVSKFDKFSITGLSMTQR*QWRLTK
Trigger: CTTTGTCAAACGCCACTGCAAGCGCTGCGTCATCGA...CAAGCCAGTTATGCTGAATTTGTCAAACTTAGACACCCTTGACAACTGCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATTTTCTTTGGCCTCTGTaGCCCATGAGAAATGAGGAA +
Preference number: 5 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHFLWPL*PMRNEE
Trigger: TTCCTCATTTCTCATGGGCAACAGAGGCCAAAGAAA...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp AAAGAACCGAGGCATCTGTCTCTGCCAGCTGTAGGACAGATGTGCCTGATGCATACAGTAGGAGTGCAGTaGTCAAGGGTGTCTAAGTTT +
Preference number: 5 (lower is better)
Translates to: KEPRHLSLPAVGQMCLMHTVGVQ*SRVSKF
Trigger: AAACTTAGACACCCTTGACAACTGCACTCCTACTGT...ATGCATCAGGCACATCTGTCCTACAGCTGGCAGAGACAGATGCCTCGGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGGCGTGTGATCTGTACTaGAACTCACGTCAGATGAGA +
Preference number: 5 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLACDLY*NSRQMR
Trigger: TCTCATCTGACGTGAGTTCAAGTACAGATCACACGC...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS-3UTR CAA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTCGCTTGCAGTGGCGTTaGACAAAGCGCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLRLQWR*TKRRAS
Trigger: GGAGGCCCTGCGCTTTGTCAAACGCCACTGCAAGCG...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp ACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCCTGGGTGCTCTAGAATGCAGAAAGTATTaGTGTACAGAGACGACAGCA +
Preference number: 5 (lower is better)
Translates to: TSIHRISSPGRGRCLGALECRKY*CTETTA
Trigger: TGCTGTCGTCTCTGTACACAAATACTTTCTGCATTC...TAGAGCACCCAGGCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTCTGATGCAGGTCACTTaGGAGCATCCTGACACATCC +
Preference number: 5 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTLMQVT*EHPDTS
Trigger: GGATGTGTCAGGATGCTCCAAAGTGACCTGCATCAG...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGATTGCTTTGTTCAGGTTaGTGTGAATACAACGCCGGA +
Preference number: 5 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRLLCSG*CEYNAG
Trigger: TCCGGCGTTGTATTCACACAAACCTGAACAAAGCAA...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTTCTTGCTTCGTTTCTTaGGCCTCTGTTGCCCATGAG +
Preference number: 5 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSSCFVS*ASVAHE
Trigger: CTCATGGGCAACAGAGGCCAAAGAAACGAAGCAAGA...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp GCCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTTGCTATGGTATTGAGTaGACAAGAATGTCCATGGGT +
Preference number: 5 (lower is better)
Translates to: ARCARRGIRKTFEDMCSLCYGIE*TRMSMG
Trigger: ACCCATGGACATTCTTGTCAACTCAATACCATAGCA...AAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCTCCTGAAATCACATCCATCCACAGAATCAGTTCTCCTGGAAGAGGTCGATGCTCTGCTTTGCATTCTTaGGTGGAAAACACGCAGACA +
Preference number: 5 (lower is better)
Translates to: SPEITSIHRISSPGRGRCSALHS*VENTQT
Trigger: TGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGA...GCATCGACCTCTTCCAGGAGAACTGATTCTGTGGATGGATGTGATTTCAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp CCAGGTGTGCAAGGCGAGGGATCAGAAAAACTTTTGAGGACATGTGTTCCCTTGTGTGAACAGTCAGCTTaGTCTCATGTTTGGAAGACA +
Preference number: 5 (lower is better)
Translates to: PGVQGEGSEKLLRTCVPLCEQSA*SHVWKT
Trigger: TGTCTTCCAAACATGAGACAAAGCTGACTGTTCACA...CAAGGGAACACATGTCCTCAAAAGTTTTTCTGATCCCTCGCCTTGCACACCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp AACCTTCCCGGAAGAAAGAGCTGTTTTGAGTGGGTGTCGGTGCTTACATACGCTTTCCTAGTGAGACCTTaGGTTTGGTCTCCAAAAATC +
Preference number: 5 (lower is better)
Translates to: NLPGRKSCFEWVSVLTYAFLVRP*VWSPKI
Trigger: GATTTTTGGAGACCAAACCAAAGGTCTCACTAGGAA...AGCGTATGTAAGCACCGACACCCACTCAAAACAGCTCTTTCTTCCGGGAAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp AGAGTAAGCGCCTTGCTCAAGGAACAGCGATCAGCCTGCTTAAGTACATCTTTTTGTTTGCTGTTTGTCTaGCTTCGTTTCTTTGGCCTC +
Preference number: 5 (lower is better)
Translates to: RVSALLKEQRSACLSTSFCLLFV*LRFFGL
Trigger: GAGGCCAAAGAAACGAAGCAAGACAAACAGCAAACA...AAAAGATGTACTTAAGCAGGCTGATCGCTGTTCCTTGAGCAAGGCGCTTACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAGGAGAGTAAGCGCCTaGCTCAAGGAACAGCGATCA +
Preference number: 5 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLRRVSA*LKEQRS
Trigger: TGATCGCTGTTCCTTGAGCAAGGCGCTTACTCTCCT...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp ACCTGGAAGTCTGCTTTGCATTCTTTGGTGGAAAACACGCAGACAGACATGGAGTGCTATGGTATTGAGTaGACAAGAATGTCCATGGGT +
Preference number: 5 (lower is better)
Translates to: TWKSALHSLVENTQTDMECYGIE*TRMSMG
Trigger: ACCCATGGACATTCTTGTCAACTCAATACCATAGCA...CTCCATGTCTGTCTGCGTGTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp AACCTCCATCATAGATTCCCACCCCAAGGGAGAACAGAATGGATGAACAGGAGAGGCCTGAAAAGTATTTaGCCTATGCAAAGTGCTATG +
Preference number: 5 (lower is better)
Translates to: NLHHRFPPQGRTEWMNRRGLKSI*PMQSAM
Trigger: CATAGCACTTTGCATAGGCAAAATACTTTTCAGGCC...TCTCCTGTTCATCCATTCTGTTCTCCCTTGGGGTGGGAATCTATGATGGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGACCTGGAAGTCTGCTTaGCATTCTTTGGTGGAAAAC +
Preference number: 5 (lower is better)
Translates to: CDTQILKLQIGSQVTELRTWKSA*HSLVEN
Trigger: GTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGACCTGGAAGTCTGCTTaGCATTCTTTGGTGGAAAAC +
Preference number: 5 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWTWKSA*HSLVEN
Trigger: GTTTTCCACCAAAGAATGCAAAGCAGACTTCCAGGT...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTTTCAGCATAACTGGCTaGGAGATGCAGAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTFSITG*EMQRFC
Trigger: GCAGAACCTCTGCATCTCCAAGCCAGTTATGCTGAA...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp GGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAAAACATCGATGACGCAGCGCTaGCAGTGGCGTTTGACAAAG +
Preference number: 5 (lower is better)
Translates to: GPCLLIKNCKGLYSYLKTSMTQR*QWRLTK
Trigger: CTTTGTCAAACGCCACTGCAAGCGCTGCGTCATCGA...TGTTTTCAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TGTGACACCCAAATCCTGAAACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGATGCCTGTTTGCTGTTaGTCTTGCTTCGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: CDTQILKLQIGSQVTELRMPVCC*SCFVSL
Trigger: CAAAGAAACGAAGCAAGACAAACAGCAAACAGGCAT...CCTCAGCTCTGTGACTTGTGACCCTATTTGAAGTTTCAGGATTTGGGTGTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGAGGGAAGTGGGTGATTaGCAGCCAAAGGACATACAG +
Preference number: 5 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLREVGD*QPKDIQ
Trigger: CTGTATGTCCTTTGGCTGCAAATCACCCACTTCCCT...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp AATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTTCATGGGAATGCAGAAAGTATTaGTGTACAGAGACGACAGCA +
Preference number: 5 (lower is better)
Translates to: NRVTSHRAEECCLQLLSWECRKY*CTETTA
Trigger: TGCTGTCGTCTCTGTACACAAATACTTTCTGCATTC...CCATGAAAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp AACCTTCCCGGAAGAAAGAGCTGTTTTGAGTGGGTGTCGGTGCTTACATACGCTTCCATTCATCTGGCATaGTTGAGTGAACAGAATTTA +
Preference number: 5 (lower is better)
Translates to: NLPGRKSCFEWVSVLTYASIHLA*LSEQNL
Trigger: TAAATTCTGTTCACTCAACAATGCCAGATGAATGGA...AGCGTATGTAAGCACCGACACCCACTCAAAACAGCTCTTTCTTCCGGGAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGGAAGAAAGAGCTGTTTaGAGTGGGTGTCGGTGCTTA +
Preference number: 5 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLEERAV*SGCRCL
Trigger: TAAGCACCGACACCCACTCAAAACAGCTCTTTCTTC...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTGGCCTGAAAAGTATTTaGCCTATGCAAAGTGCTATG +
Preference number: 5 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLGLKSI*PMQSAM
Trigger: CATAGCACTTTGCATAGGCAAAATACTTTTCAGGCC...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TGGAATTTCTTCTGGCTATCTGACTTCATGCAAATGAGGCTAGAATATAGACTTAGGGAAGTGGGTGATTaGCAGCCAAAGGACATACAG +
Preference number: 5 (lower is better)
Translates to: WNFFWLSDFMQMRLEYRLREVGD*QPKDIQ
Trigger: CTGTATGTCCTTTGGCTGCAAATCACCCACTTCCCT...AAGTCTATATTCTAGCCTCATTTGCATGAAGTCAGATAGCCAGAAGAAATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp ACTTCAAATAGGGTCACAAGTCACAGAGCTGAGGAATGCTGCCTTCAACTTCTTGGCCTTTACTCCTATTaGAAAACACTGAGTAAAAGC +
Preference number: 5 (lower is better)
Translates to: TSNRVTSHRAEECCLQLLGLYSY*KTLSKS
Trigger: GCTTTTACTCAGTGTTTTCAAATAGGAGTAAAGGCC...AAGAAGTTGAAGGCAGCATTCCTCAGCTCTGTGACTTGTGACCCTATTTGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TATGGTATTGAGTTGACAAGAATGTCCATGGGTGTGGGATTGAAGAGAGTGACTTTCCTAGTGAGACCTTaGGTTTGGTCTCCAAAAATC +
Preference number: 5 (lower is better)
Translates to: YGIELTRMSMGVGLKRVTFLVRP*VWSPKI
Trigger: GATTTTTGGAGACCAAACCAAAGGTCTCACTAGGAA...AGTCACTCTCTTCAATCCCACACCCATGGACATTCTTGTCAACTCAATACCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCATGTTTGGAAGACAGTTTAGGTGATGCGGTCAGGGATTCATTCTCTGGATCTTCCATTCATCTGGCATaGTTGAGTGAACAGAATTTA +
Preference number: 5 (lower is better)
Translates to: SCLEDSLGDAVRDSFSGSSIHLA*LSEQNL
Trigger: TAAATTCTGTTCACTCAACAATGCCAGATGAATGGA...AGATCCAGAGAATGAATCCCTGACCGCATCACCTAAACTGTCTTCCAAACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS-3UTR CAA 90 bp TCCCTTGGGCCTTGCTTGTTAATTAAAAATTGCAAGGGCCTTTACTCCTATTTGTGTGAACAGTCAGCTTaGTCTCATGTTTGGAAGACA +
Preference number: 5 (lower is better)
Translates to: SLGPCLLIKNCKGLYSYLCEQSA*SHVWKT
Trigger: TGTCTTCCAAACATGAGACAAAGCTGACTGTTCACA...CAAATAGGAGTAAAGGCCCTTGCAATTTTTAATTAACAAGCAAGGCCCAAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2
CDS TCA 72 bp CGGTCAGGCGGACGCAGCGGCGCAGGTAGAGGTGGGTaGGCTGCGTGCAGTGCGCCGCGATGGTGTGCAGGC +
Preference number: 6 (lower is better)
Translates to: RSGGRSGAGRGG*AACSAPRWCAG
Trigger: GCCTGCACACCATCGCGGCGCACTGCACGCAGCTCACCCACCTCTACCTGCGCCGCTGCGTCCGCCTGACCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS GCA 72 bp CCGTCATGCCCGCCGTCTCCCGGGACACTCCATAGCTaGGGCGCACGTCCTGCGCGCTCGGCCCGAGGAAAG +
Preference number: 6 (lower is better)
Translates to: PSCPPSPGTLHS*GARPARSARGK
Trigger: CTTTCCTCGGGCCGAGCGCGCAGGACGTGCGCCGCAGCTATGGAGTGTCCCGGGAGACGGCGGGCATGACGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS CAA 90 bp CGGCCGCAGTGCGCGATGCTCAGGTACCGCAGGCGGGACTCCAGCTaGGCGATCTCCCGCAGGCCGAAGTCGCTGACGAAGCGGCAGTCG +
Preference number: 6 (lower is better)
Translates to: RPQCAMLRYRRRDSS*AISRRPKSLTKRQS
Trigger: CGACTGCCGCTTCGTCAGCGACTTCGGCCTGCGGGAGATCGCCAAGCTGGAGTCCCGCCTGCGGTACCTGAGCATCGCGCACTGCGGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 90 bp TCCTGGCAGAGTCTGCGGGTCAGCACCTTGAGGGCGCGGTCCACGTaGATGGTCTCGCCCGTCAGGCGGATAGTCCTCCAGAGCCGCGGG +
Preference number: 6 (lower is better)
Translates to: SWQSLRVSTLRARST*MVSPVRRIVLQSRG
Trigger: CCCGCGGCTCTGGAGGACTATCCGCCTGACGGGCGAGACCATCAACGTGGACCGCGCCCTCAAGGTGCTGACCCGCAGACTCTGCCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS TCA 72 bp TGCAGTACTTGGCCACGTAGCGGATGCCCACGTCGGTaGCCCGGCCGCAGTGCGCGATGCTCAGGTACCGCA +
Preference number: 6 (lower is better)
Translates to: CSTWPRSGCPRR*PGRSARCSGTA
Trigger: TGCGGTACCTGAGCATCGCGCACTGCGGCCGGGTCACCGACGTGGGCATCCGCTACGTGGCCAAGTACTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS GCA 72 bp ACCATGGAGTGGTCCGGGAGCCGGTCTATGCTGGCCTaGTCCTTCTGGGGTCTGGAGGCGAGCCGGATGAGC +
Preference number: 6 (lower is better)
Translates to: TMEWSGSRSMLA*SFWGLEASRMS
Trigger: GCTCATCCGGCTCGCCTCCAGACCCCAGAAGGAGCAGGCCAGCATAGACCGGCTCCCGGACCACTCCATGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS GCA 72 bp AGGTGGGTGAGCTGCGTGCAGTGCGCCGCGATGGTGTaGAGGCCTTCGTCCTCCAGCACGAAGCAGTCCGTC +
Preference number: 6 (lower is better)
Translates to: RWVSCVQCAAMV*RPSSSSTKQSV
Trigger: GACGGACTGCTTCGTGCTGGAGGACGAAGGCCTGCACACCATCGCGGCGCACTGCACGCAGCTCACCCACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp TCTGCACCATGGAGTGGTCCGGGAGCCGGTCTATGCTaGCCTGCTCCTTCTGGGGTCTGGAGGCGAGCCGGA +
Preference number: 6 (lower is better)
Translates to: SAPWSGPGAGLC*PAPSGVWRRAG
Trigger: TCCGGCTCGCCTCCAGACCCCAGAAGGAGCAGGCCAGCATAGACCGGCTCCCGGACCACTCCATGGTGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 72 bp CAGCGGCGGCACACTCGCGCGCAGCGGCACAGCTGGTaGGTGGGCAGGAAGGAGAAGATCTGCACCATGGAG +
Preference number: 6 (lower is better)
Translates to: QRRHTRAQRHSW*VGRKEKICTME
Trigger: CTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTGTGCCGCTGCGCGCGAGTGTGCCGCCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 72 bp TTGGGGGTGTCCTGGCAGAGTCTGCGGGTCAGCACCTaGAGGGCGCGGTCCACGTTGATGGTCTCGCCCGTC +
Preference number: 6 (lower is better)
Translates to: LGVSWQSLRVST*RARSTLMVSPV
Trigger: GACGGGCGAGACCATCAACGTGGACCGCGCCCTCAAGGTGCTGACCCGCAGACTCTGCCAGGACACCCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 72 bp TGCGCGATGCTCAGGTACCGCAGGCGGGACTCCAGCTaGGCGATCTCCCGCAGGCCGAAGTCGCTGACGAAG +
Preference number: 6 (lower is better)
Translates to: CAMLRYRRRDSS*AISRRPKSLTK
Trigger: CTTCGTCAGCGACTTCGGCCTGCGGGAGATCGCCAAGCTGGAGTCCCGCCTGCGGTACCTGAGCATCGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 90 bp AGGTTGTACCAGCGGCGGCACACTCGCGCGCAGCGGCACAGCTGGTaGGTGGGCAGGAAGGAGAAGATCTGCACCATGGAGTGGTCCGGG +
Preference number: 6 (lower is better)
Translates to: RLYQRRHTRAQRHSW*VGRKEKICTMEWSG
Trigger: CCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTGTGCCGCTGCGCGCGAGTGTGCCGCCGCTGGTACAACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS GCA 72 bp AGATCTGCACCATGGAGTGGTCCGGGAGCCGGTCTATaGTGGCCTGCTCCTTCTGGGGTCTGGAGGCGAGCC +
Preference number: 6 (lower is better)
Translates to: RSAPWSGPGAGL*WPAPSGVWRRA
Trigger: GGCTCGCCTCCAGACCCCAGAAGGAGCAGGCCAGCATAGACCGGCTCCCGGACCACTCCATGGTGCAGATCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp GGCGGCACACTCGCGCGCAGCGGCACAGCTGGTTGGTaGGCAGGAAGGAGAAGATCTGCACCATGGAGTGGT +
Preference number: 6 (lower is better)
Translates to: GGTLARSGTAGW*AGRRRSAPWSG
Trigger: ACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTGTGCCGCTGCGCGCGAGTGTGCCGCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp CCTGAGACTTCCAGTCGCCTCAGTTCGGGGCAGCACTaGGCGATGGTGTACAGCCCTCGGTCTGTGAGCCGC +
Preference number: 6 (lower is better)
Translates to: PETSSRLSSGQH*AMVYSPRSVSR
Trigger: GCGGCTCACAGACCGAGGGCTGTACACCATCGCCCAGTGCTGCCCCGAACTGAGGCGACTGGAAGTCTCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp GCCGGGTTGGTGTGCTCGATGACGCAGCGCTTGCAGTaGCGTTTGACAAAGCGCAGGGCCTCCACGGAGACC +
Preference number: 6 (lower is better)
Translates to: AGLVCSMTQRLQ*RLTKRRASTET
Trigger: GGTCTCCGTGGAGGCCCTGCGCTTTGTCAAACGCCACTGCAAGCGCTGCGTCATCGAGCACACCAACCCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 72 bp AGTCTGCGGGTCAGCACCTTGAGGGCGCGGTCCACGTaGATGGTCTCGCCCGTCAGGCGGATAGTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: SLRVSTLRARST*MVSPVRRIVLQ
Trigger: CTGGAGGACTATCCGCCTGACGGGCGAGACCATCAACGTGGACCGCGCCCTCAAGGTGCTGACCCGCAGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 90 bp AGACACACGTTGGGGGTGTCCTGGCAGAGTCTGCGGGTCAGCACCTaGAGGGCGCGGTCCACGTTGATGGTCTCGCCCGTCAGGCGGATA +
Preference number: 6 (lower is better)
Translates to: RHTLGVSWQSLRVST*RARSTLMVSPVRRI
Trigger: TATCCGCCTGACGGGCGAGACCATCAACGTGGACCGCGCCCTCAAGGTGCTGACCCGCAGACTCTGCCAGGACACCCCCAACGTGTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 90 bp AAGCCCTGGCCGGTGATGCTCTCGCAGGACTTGAGGCTGAGCCGCTaGAGGTTGAAGCAGTTCAGGGCCAGGCACTCCAGGCCCGTGTCG +
Preference number: 6 (lower is better)
Translates to: KPWPVMLSQDLRLSR*RLKQFRARHSRPVS
Trigger: CGACACGGGCCTGGAGTGCCTGGCCCTGAACTGCTTCAACCTCAAGCGGCTCAGCCTCAAGTCCTGCGAGAGCATCACCGGCCAGGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 90 bp GCGGCCACGATCTGCAAGCCCTGGCCGGTGATGCTCTCGCAGGACTaGAGGCTGAGCCGCTTGAGGTTGAAGCAGTTCAGGGCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: AATICKPWPVMLSQD*RLSRLRLKQFRARH
Trigger: GTGCCTGGCCCTGAACTGCTTCAACCTCAAGCGGCTCAGCCTCAAGTCCTGCGAGAGCATCACCGGCCAGGGCTTGCAGATCGTGGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp ACGGTTTCCAGCATGAGACACACGTTGGGGGTGTCCTaGCAGAGTCTGCGGGTCAGCACCTTGAGGGCGCGG +
Preference number: 6 (lower is better)
Translates to: TVSSMRHTLGVS*QSLRVSTLRAR
Trigger: CCGCGCCCTCAAGGTGCTGACCCGCAGACTCTGCCAGGACACCCCCAACGTGTGTCTCATGCTGGAAACCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 90 bp TGGCCGGTGATGCTCTCGCAGGACTTGAGGCTGAGCCGCTTGAGGTaGAAGCAGTTCAGGGCCAGGCACTCCAGGCCCGTGTCGGATACC +
Preference number: 6 (lower is better)
Translates to: WPVMLSQDLRLSRLR*KQFRARHSRPVSDT
Trigger: GGTATCCGACACGGGCCTGGAGTGCCTGGCCCTGAACTGCTTCAACCTCAAGCGGCTCAGCCTCAAGTCCTGCGAGAGCATCACCGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 90 bp CGCCTGCAGCCACTGACAGTTACGGTTTCCAGCATGAGACACACGTaGGGGGTGTCCTGGCAGAGTCTGCGGGTCAGCACCTTGAGGGCG +
Preference number: 6 (lower is better)
Translates to: RLQPLTVTVSSMRHT*GVSWQSLRVSTLRA
Trigger: CGCCCTCAAGGTGCTGACCCGCAGACTCTGCCAGGACACCCCCAACGTGTGTCTCATGCTGGAAACCGTAACTGTCAGTGGCTGCAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 90 bp GAGACCTCGCAGTCCTGGACATTCAGCGTCTGGAGGTCAAAGCAGTaGGCGGCCACGATCTGCAAGCCCTGGCCGGTGATGCTCTCGCAG +
Preference number: 6 (lower is better)
Translates to: ETSQSWTFSVWRSKQ*AATICKPWPVMLSQ
Trigger: CTGCGAGAGCATCACCGGCCAGGGCTTGCAGATCGTGGCCGCCAACTGCTTTGACCTCCAGACGCTGAATGTCCAGGACTGCGAGGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 90 bp AAAGCCGGGTTGGTGTGCTCGATGACGCAGCGCTTGCAGTGGCGTTaGACAAAGCGCAGGGCCTCCACGGAGACCTCGCAGTCCTGGACA +
Preference number: 6 (lower is better)
Translates to: KAGLVCSMTQRLQWR*TKRRASTETSQSWT
Trigger: TGTCCAGGACTGCGAGGTCTCCGTGGAGGCCCTGCGCTTTGTCAAACGCCACTGCAAGCGCTGCGTCATCGAGCACACCAACCCGGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS GCA 72 bp AGCGTCTGGAGGTCAAAGCAGTTGGCGGCCACGATCTaGAAGCCCTGGCCGGTGATGCTCTCGCAGGACTTG +
Preference number: 6 (lower is better)
Translates to: SVWRSKQLAATI*KPWPVMLSQDL
Trigger: CAAGTCCTGCGAGAGCATCACCGGCCAGGGCTTGCAGATCGTGGCCGCCAACTGCTTTGACCTCCAGACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS GCA 72 bp GGAGATTCGGTGGACATATCAGGGCTGGGCTGGGCGTaGTCAGTGTGCGCATGCTCAGGTCGGAGTCTTCGC +
Preference number: 6 (lower is better)
Translates to: GDSVDISGLGWA*SVCACSGRSLR
Trigger: GCGAAGACTCCGACCTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCCTGATATGTCCACCGAATCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp GCTGGTTGGTGGGCAGGAAGGAGAAGATCTGCACCATaGAGTGGTCCGGGAGCCGGTCTATGCTGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: AGWWAGRRRSAP*SGPGAGLCWPA
Trigger: AGCAGGCCAGCATAGACCGGCTCCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp AGTTTGGTGCAGTTCTTGGCGAGGTACTCCACACCGTaGTCCGTGATGCCCTCGCAGCCCCTCGCGTTGAGG +
Preference number: 6 (lower is better)
Translates to: SLVQFLARYSTP*SVMPSQPLALR
Trigger: CCTCAACGCGAGGGGCTGCGAGGGCATCACGGACCACGGTGTGGAGTACCTCGCCAAGAACTGCACCAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp AGGTCAAAGCAGTTGGCGGCCACGATCTGCAAGCCCTaGCCGGTGATGCTCTCGCAGGACTTGAGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: RSKQLAATICKP*PVMLSQDLRLS
Trigger: GCTCAGCCTCAAGTCCTGCGAGAGCATCACCGGCCAGGGCTTGCAGATCGTGGCCGCCAACTGCTTTGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 72 bp ATGCTCTCGCAGGACTTGAGGCTGAGCCGCTTGAGGTaGAAGCAGTTCAGGGCCAGGCACTCCAGGCCCGTG +
Preference number: 6 (lower is better)
Translates to: MLSQDLRLSRLR*KQFRARHSRPV
Trigger: CACGGGCCTGGAGTGCCTGGCCCTGAACTGCTTCAACCTCAAGCGGCTCAGCCTCAAGTCCTGCGAGAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 72 bp TTGGTGTGCTCGATGACGCAGCGCTTGCAGTGGCGTTaGACAAAGCGCAGGGCCTCCACGGAGACCTCGCAG +
Preference number: 6 (lower is better)
Translates to: LVCSMTQRLQWR*TKRRASTETSQ
Trigger: CTGCGAGGTCTCCGTGGAGGCCCTGCGCTTTGTCAAACGCCACTGCAAGCGCTGCGTCATCGAGCACACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 90 bp TCCCTTCAGAAGAAAGCCGGGTTGGTGTGCTCGATGACGCAGCGCTaGCAGTGGCGTTTGACAAAGCGCAGGGCCTCCACGGAGACCTCG +
Preference number: 6 (lower is better)
Translates to: SLQKKAGLVCSMTQR*QWRLTKRRASTETS
Trigger: CGAGGTCTCCGTGGAGGCCCTGCGCTTTGTCAAACGCCACTGCAAGCGCTGCGTCATCGAGCACACCAACCCGGCTTTCTTCTGAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp ATCCTGGGAGATTCGGTGGACATATCAGGGCTGGGCTaGGCGTGCTCAGTGTGCGCATGCTCAGGTCGGAGT +
Preference number: 6 (lower is better)
Translates to: ILGDSVDISGLG*ACSVCACSGRS
Trigger: ACTCCGACCTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCCTGATATGTCCACCGAATCTCCCAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp TTGGTGGGCAGGAAGGAGAAGATCTGCACCATGGAGTaGTCCGGGAGCCGGTCTATGCTGGCCTGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LVGRKEKICTME*SGSRSMLACSF
Trigger: GAAGGAGCAGGCCAGCATAGACCGGCTCCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp ACAAAGCGCAGGGCCTCCACGGAGACCTCGCAGTCCTaGACATTCAGCGTCTGGAGGTCAAAGCAGTTGGCG +
Preference number: 6 (lower is better)
Translates to: TKRRASTETSQS*TFSVWRSKQLA
Trigger: CGCCAACTGCTTTGACCTCCAGACGCTGAATGTCCAGGACTGCGAGGTCTCCGTGGAGGCCCTGCGCTTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 72 bp CAGTCCTGGACATTCAGCGTCTGGAGGTCAAAGCAGTaGGCGGCCACGATCTGCAAGCCCTGGCCGGTGATG +
Preference number: 6 (lower is better)
Translates to: QSWTFSVWRSKQ*AATICKPWPVM
Trigger: CATCACCGGCCAGGGCTTGCAGATCGTGGCCGCCAACTGCTTTGACCTCCAGACGCTGAATGTCCAGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 72 bp AAGAAAGCCGGGTTGGTGTGCTCGATGACGCAGCGCTaGCAGTGGCGTTTGACAAAGCGCAGGGCCTCCACG +
Preference number: 6 (lower is better)
Translates to: KKAGLVCSMTQR*QWRLTKRRAST
Trigger: CGTGGAGGCCCTGCGCTTTGTCAAACGCCACTGCAAGCGCTGCGTCATCGAGCACACCAACCCGGCTTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS GCA 72 bp TGCTCGAGCTGCCTTTGCCCTCACTGCCGTACTGTTTaGCATTGTTCGCGCCCATCCTGTAGCCGTCATGCC +
Preference number: 6 (lower is better)
Translates to: CSSCLCPHCRTV*HCSRPSCSRHA
Trigger: GGCATGACGGCTACAGGATGGGCGCGAACAATGGCAAACAGTACGGCAGTGAGGGCAAAGGCAGCTCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS CCA 72 bp CTGAAATCCTGGGAGATTCGGTGGACATATCAGGGCTaGGCTGGGCGTGCTCAGTGTGCGCATGCTCAGGTC +
Preference number: 6 (lower is better)
Translates to: LKSWEIRWTYQG*AGRAQCAHAQV
Trigger: GACCTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCCTGATATGTCCACCGAATCTCCCAGGATTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp CGAGGAGGTGGACGAGCCCCTTCCATTCTGAAATCCTaGGAGATTCGGTGGACATATCAGGGCTGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RGGGRAPSILKS*EIRWTYQGWAG
Trigger: CCCAGCCCAGCCCTGATATGTCCACCGAATCTCCCAGGATTTCAGAATGGAAGGGGCTCGTCCACCTCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp TCCACGGAGACCTCGCAGTCCTGGACATTCAGCGTCTaGAGGTCAAAGCAGTTGGCGGCCACGATCTGCAAG +
Preference number: 6 (lower is better)
Translates to: STETSQSWTFSV*RSKQLAATICK
Trigger: CTTGCAGATCGTGGCCGCCAACTGCTTTGACCTCCAGACGCTGAATGTCCAGGACTGCGAGGTCTCCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 72 bp CCACTGACAGTTACGGTTTCCAGCATGAGACACACGTaGGGGGTGTCCTGGCAGAGTCTGCGGGTCAGCACC +
Preference number: 6 (lower is better)
Translates to: PLTVTVSSMRHT*GVSWQSLRVST
Trigger: GGTGCTGACCCGCAGACTCTGCCAGGACACCCCCAACGTGTGTCTCATGCTGGAAACCGTAACTGTCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 72 bp ATCTGCAAGCCCTGGCCGGTGATGCTCTCGCAGGACTaGAGGCTGAGCCGCTTGAGGTTGAAGCAGTTCAGG +
Preference number: 6 (lower is better)
Translates to: ICKPWPVMLSQD*RLSRLRLKQFR
Trigger: CCTGAACTGCTTCAACCTCAAGCGGCTCAGCCTCAAGTCCTGCGAGAGCATCACCGGCCAGGGCTTGCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CCA 72 bp CGAGCCCCTTCCATTCTGAAATCCTGGGAGATTCGGTaGACATATCAGGGCTGGGCTGGGCGTGCTCAGTGT +
Preference number: 6 (lower is better)
Translates to: RAPSILKSWEIR*TYQGWAGRAQC
Trigger: ACACTGAGCACGCCCAGCCCAGCCCTGATATGTCCACCGAATCTCCCAGGATTTCAGAATGGAAGGGGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 90 bp TTCAGGGCCAGGCACTCCAGGCCCGTGTCGGATACCAAAGGGCATTaGCCGATATCCAGGGATTTGAGTTTGGTGCAGTTCTTGGCGAGG +
Preference number: 6 (lower is better)
Translates to: FRARHSRPVSDTKGH*PISRDLSLVQFLAR
Trigger: CCTCGCCAAGAACTGCACCAAACTCAAATCCCTGGATATCGGCAAATGCCCTTTGGTATCCGACACGGGCCTGGAGTGCCTGGCCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 90 bp AGGCCCGTGTCGGATACCAAAGGGCATTTGCCGATATCCAGGGATTaGAGTTTGGTGCAGTTCTTGGCGAGGTACTCCACACCGTGGTCC +
Preference number: 6 (lower is better)
Translates to: RPVSDTKGHLPISRD*SLVQFLARYSTPWS
Trigger: GGACCACGGTGTGGAGTACCTCGCCAAGAACTGCACCAAACTCAAATCCCTGGATATCGGCAAATGCCCTTTGGTATCCGACACGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS TCA 72 bp ATGGAGGACGAGGAGGTGGACGAGCCCCTTCCATTCTaGAATCCTGGGAGATTCGGTGGACATATCAGGGCT +
Preference number: 6 (lower is better)
Translates to: MEDEEVDEPLPF*NPGRFGGHIRA
Trigger: AGCCCTGATATGTCCACCGAATCTCCCAGGATTTCAGAATGGAAGGGGCTCGTCCACCTCCTCGTCCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS TCA 72 bp ATCAAAGACGGCCTCGTTGGAGATATTGTAACAGCCTaGGACTTCCAGTCGCCTCAGTTCGGGGCAGCACTG +
Preference number: 6 (lower is better)
Translates to: IKDGLVGDIVTA*DFQSPQFGAAL
Trigger: CAGTGCTGCCCCGAACTGAGGCGACTGGAAGTCTCAGGCTGTTACAATATCTCCAACGAGGCCGTCTTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 72 bp AGGCACTCCAGGCCCGTGTCGGATACCAAAGGGCATTaGCCGATATCCAGGGATTTGAGTTTGGTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: RHSRPVSDTKGH*PISRDLSLVQF
Trigger: GAACTGCACCAAACTCAAATCCCTGGATATCGGCAAATGCCCTTTGGTATCCGACACGGGCCTGGAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 90 bp GTGTCGGATACCAAAGGGCATTTGCCGATATCCAGGGATTTGAGTTaGGTGCAGTTCTTGGCGAGGTACTCCACACCGTGGTCCGTGATG +
Preference number: 6 (lower is better)
Translates to: VSDTKGHLPISRDLS*VQFLARYSTPWSVM
Trigger: CATCACGGACCACGGTGTGGAGTACCTCGCCAAGAACTGCACCAAACTCAAATCCCTGGATATCGGCAAATGCCCTTTGGTATCCGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS GCA 72 bp GCGTGTGATCTGTACTTGAACTCACGTCAGATGAGATaGTCGAGCTGCCTTTGCCCTCACTGCCGTACTGTT +
Preference number: 6 (lower is better)
Translates to: ACDLYLNSRQMR*SSCLCPHCRTV
Trigger: AACAGTACGGCAGTGAGGGCAAAGGCAGCTCGAGCATCTCATCTGACGTGAGTTCAAGTACAGATCACACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504595.2
CDS GCA 72 bp GCGTGTGATCTGTACTTGAACTCACGTCAGATGAGATaGTCGAGCTGCCTTTGCATTCTGTGGCCACAGCTC +
Preference number: 6 (lower is better)
Translates to: ACDLYLNSRQMR*SSCLCILWPQL
Trigger: GAGCTGTGGCCACAGAATGCAAAGGCAGCTCGAGCATCTCATCTGACGTGAGTTCAAGTACAGATCACACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510662.1
CDS CAA 72 bp ACCAAAGGGCATTTGCCGATATCCAGGGATTTGAGTTaGGTGCAGTTCTTGGCGAGGTACTCCACACCGTGG +
Preference number: 6 (lower is better)
Translates to: TKGHLPISRDLS*VQFLARYSTPW
Trigger: CCACGGTGTGGAGTACCTCGCCAAGAACTGCACCAAACTCAAATCCCTGGATATCGGCAAATGCCCTTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS CAA 72 bp TCGGATACCAAAGGGCATTTGCCGATATCCAGGGATTaGAGTTTGGTGCAGTTCTTGGCGAGGTACTCCACA +
Preference number: 6 (lower is better)
Translates to: SDTKGHLPISRD*SLVQFLARYST
Trigger: TGTGGAGTACCTCGCCAAGAACTGCACCAAACTCAAATCCCTGGATATCGGCAAATGCCCTTTGGTATCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329673.8
ENST00000504595.2
ENST00000510662.1
CDS TCA 72 bp TTGCTTTGTTCAGGTTTGTGTGAATACAACGCCGGATaGACTCTGTCCCTTCAGAAGAAAGCCGGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: LLCSGLCEYNAG*TLSLQKKAGLV
Trigger: CACCAACCCGGCTTTCTTCTGAAGGGACAGAGTTCATCCGGCGTTGTATTCACACAAACCTGAACAAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329673.8
ENST00000504595.2