RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000112234

Ensembl transcript IDs: ENST00000229971.2, ENST00000369244.7

Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTGTTGTGAGAATTGAATTAGTCAATGCAAAGCACAAGAAACAGTaGCAGGCACAAAGGAAGCATTCTCCTCATGTGACTACTGAACAC +
Preference number: 1 (lower is better)
Translates to: VVVRIELVNAKHKKQ*QAQRKHSPHVTTEH
Trigger: GTGTTCAGTAGTCACATGAGGAGAATGCTTCCTTTGTGCCTGGCACTGTTTCTTGTGCTTTGCATTGACTAATTCAATTCTCACAACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CCA 90 bp AAATTAGGAATGGGCAAACATGGATTAACTGACTCGAAAATACTCTaGAATAGGGGTCACAAATTTGGTCCACAAGCCAAATCCAGCCAG +
Preference number: 1 (lower is better)
Translates to: KLGMGKHGLTDSKIL*NRGHKFGPQAKSSQ
Trigger: CTGGCTGGATTTGGCTTGTGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATGTTTGCCCATTCCTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR GCA 90 bp AGCCAAATATTCAAGCTTACAGGCAAAGATCTTGAGCACACTTACTaGTGTGCCAAAGGAATAATCTTGGCCCCATCCCTACTTATAAAA +
Preference number: 1 (lower is better)
Translates to: SQIFKLTGKDLEHTY*CAKGIILAPSLLIK
Trigger: TTTTATAAGTAGGGATGGGGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGTAAGCTTGAATATTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR GCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATaGAAAGGAGACTTATGTGGTGCTGTCATCATTTTGCACTGCTAC +
Preference number: 1 (lower is better)
Translates to: TVYDCFHIRMAELNK*KGDLCGAVIILHCY
Trigger: GTAGCAGTGCAAAATGATGACAGCACCACATAAGTCTCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR GCA 90 bp TATTGGAACATGGCCACACTCATTCGTTTAGGTACTGTCTATGATTaGTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAGAC +
Preference number: 1 (lower is better)
Translates to: YWNMATLIRLGTVYD*FHIRMAELNKCKGD
Trigger: GTCTCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGTACCTAAACGAATGAGTGTGGCCATGTTCCAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR TCA 90 bp CTGCCTAGTTATTGCTTATTTGATAAGTCAATGCCAACGTTGAAGTaGCTGAAATTAGTCTCTATGAATTATCTGTGTGGCACAATTACA +
Preference number: 1 (lower is better)
Translates to: LPSYCLFDKSMPTLK*LKLVSMNYLCGTIT
Trigger: TGTAATTGTGCCACACAGATAATTCATAGAGACTAATTTCAGTCACTTCAACGTTGGCATTGACTTATCAAATAAGCAATAACTAGGCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CCA 90 bp AAGGACTGTGTCCAAAGTAAACTTAAGACTATTAAATTAGCCTTTTaGCAAGAATGGTTGCTTAAAGAATTGAGAACACTGGGAACAACA +
Preference number: 1 (lower is better)
Translates to: KDCVQSKLKTIKLAF*QEWLLKELRTLGTT
Trigger: TGTTGTTCCCAGTGTTCTCAATTCTTTAAGCAACCATTCTTGCCAAAAGGCTAATTTAATAGTCTTAAGTTTACTTTGGACACAGTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACCTATATTGCCCAGGTTaGAGTGCAGTGGCTGCTCAC +
Preference number: 2 (lower is better)
Translates to: NDPEWFSLALDESTDVTDLYCPG*SAVAAH
Trigger: GTGAGCAGCCACTGCACTCCAACCTGGGCAATATAG...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR TCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACAGCCAGAAGCTACCCTaGACACCTAAAAGCACAGGT +
Preference number: 2 (lower is better)
Translates to: NDPEWFSLALDESTDVTDSQKLP*TPKSTG
Trigger: ACCTGTGCTTTTAGGTGTTCAGGGTAGCTTCTGGCT...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR TCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAGGCAGGAGACTCGCTTaGACCTGCAGGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGGRRLA*TCRVEV
Trigger: AACCTCCACCCTGCAGGTTCAAGCGAGTCTCCTGCC...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR TCA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCGGTGGGAAAATTATTTaGGCCCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAGGKII*AQEFKT
Trigger: GGTCTTGAACTCCTGGGCTCAAATAATTTTCCCACC...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGACAGGTTGGAGTGCAGTaGCTGCTCACAGGTGCAATC +
Preference number: 2 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGQVGVQ*LLTGAI
Trigger: GATTGCACCTGTGAGCAGCCACTGCACTCCAACCTG...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CCA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCCAAAGGAGACTTATGTaGTGCTGTCATCATTTTGCA +
Preference number: 2 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAQRRLM*CCHHFA
Trigger: TGCAAAATGATGACAGCACCACATAAGTCTCCTTTG...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR GCA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCCATTGTCCTGTTAAGTaGAAAATCGTTATATTCCAG +
Preference number: 2 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAHCPVK*KIVIFQ
Trigger: CTGGAATATAACGATTTTGCACTTAACAGGACAATG...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGATCCACTCATATTCTTaGAGAGAAGTGCTTGCAGTA +
Preference number: 2 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMIHSYS*REVLAV
Trigger: TACTGCAAGCACTTCTCTTCAAGAATATGAGTGGAT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
3UTR-3UTR TCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAATCCACTCATATTCTTaGAGAGAAGTGCTTGCAGTA +
Preference number: 2 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPIHSYS*REVLAV
Trigger: TACTGCAAGCACTTCTCTTCAAGAATATGAGTGGAT...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CAA 90 bp CGTTTAGGTACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTaGAACAAATGCAAAGGAGACTTATGTGGTGCTGTCATCATTTTG +
Preference number: 2 (lower is better)
Translates to: RLGTVYDCFHIRMAE*NKCKGDLCGAVIIL
Trigger: CAAAATGATGACAGCACCACATAAGTCTCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGTACCTAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR TCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGATCCTCATGTGACTACTaGACACTTGACATACATCGT +
Preference number: 2 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGSSCDY*TLDIHR
Trigger: ACGATGTATGTCAAGTGTTCAGTAGTCACATGAGGA...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR TCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAGGTTGTTGTGAGAATTaGATTAGTCAATGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPGCCEN*ISQCKA
Trigger: TGCTTTGCATTGACTAATTCAATTCTCACAACAACC...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR TCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAACTATTATGGAACACTaGATGGCTTTGGAATTTAGC +
Preference number: 2 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPTIMEH*MALEFS
Trigger: GCTAAATTCCAAAGCCATTCAGTGTTCCATAATAGT...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR GCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCACCAAACAAAACACTTaGCAGGTCACAGGCTTAATA +
Preference number: 2 (lower is better)
Translates to: QNRYIPASTHPSKIYISLTKQNT*QVTGLI
Trigger: TATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGT...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR GCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGCAATTGAGGAGCTTCTaGCTAGTCTTCAATTGGAAG +
Preference number: 2 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLQLRSF*LVFNWK
Trigger: CTTCCAATTGAAGACTAGGCAGAAGCTCCTCAATTG...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR TCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAGGTTGCTTAAAGAATTaGGAACACTGGGAACAACAT +
Preference number: 2 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGGCLKN*EHWEQH
Trigger: ATGTTGTTCCCAGTGTTCTCAATTCTTTAAGCAACC...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR GCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGCAAGTAACAACAAGCTaGTTTACACATTTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLQVTTS*FTHFLC
Trigger: GCACAGGAAATGTGTAAAGCAGCTTGTTGTTACTTG...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR GCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGATACCAGCATTTTGAGTaGCACATATGTTGTCATACC +
Preference number: 2 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGYQHFE*HICCHT
Trigger: GGTATGACAACATATGTGGCACTCAAAATGCTGGTA...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGGTGTGCCACCACACCTaGCTAGAAAAACTAAAAATT +
Preference number: 2 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLVCHHT*LEKLKI
Trigger: AATTTTTAGTTTTTCTAGCCAGGTGTGGTGGCACAC...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCACTCATGAAATTTTATTaGAACATGGCCACACTCATT +
Preference number: 2 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPLMKFY*NMATLI
Trigger: AATGAGTGTGGCCATGTTCCAATAAAATTTCATGAG...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CAA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACGCCTGGGTTTATATGTaGGCTCTGCCACTAGCAGCT +
Preference number: 3 (lower is better)
Translates to: NDPEWFSLALDESTDVTDAWVYM*ALPLAA
Trigger: AGCTGCTAGTGGCAGAGCCAACATATAAACCCAGGC...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CAA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAGCTATATTGCCCAGGTaGGAGTGCAGTGGCTGCTCA +
Preference number: 3 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPAILPR*ECSGCS
Trigger: TGAGCAGCCACTGCACTCCAACCTGGGCAATATAGC...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR GCA 72 bp TATTGCCCAGGTTGGAGTGCAGTGGCTGCTCACAGGTaGAATCATAAGTACACTAGAGTCTCAAAATCCCAT +
Preference number: 3 (lower is better)
Translates to: YCPGWSAVAAHR*NHKYTRVSKSH
Trigger: ATGGGATTTTGAGACTCTAGTGTACTTATGATTGCACCTGTGAGCAGCCACTGCACTCCAACCTGGGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR GCA 72 bp TTCAAGCTTACAGGCAAAGATCTTGAGCACACTTACTaGTGTGCCAAAGGAATAATCTTGGCCCCATCCCTA +
Preference number: 3 (lower is better)
Translates to: FKLTGKDLEHTY*CAKGIILAPSL
Trigger: TAGGGATGGGGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGTAAGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CAA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACTTAAGAGAAAGGGACTaGCTATATTGCCCAGGTTGG +
Preference number: 3 (lower is better)
Translates to: NDPEWFSLALDESTDVTDLRERD*LYCPGW
Trigger: CCAACCTGGGCAATATAGCAAGTCCCTTTCTCTTAA...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR GCA 72 bp GGCAGAGTTGAACAAATGCAAAGGAGACTTATGTGGTaGTGTCATCATTTTGCACTGCTACTTGGCACACTA +
Preference number: 3 (lower is better)
Translates to: GRVEQMQRRLMW*CHHFALLLGTL
Trigger: TAGTGTGCCAAGTAGCAGTGCAAAATGATGACAGCACCACATAAGTCTCCTTTGCATTTGTTCAACTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CAA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCTGGTTGCTTAAAGAATaGAGAACACTGGGAACAACA +
Preference number: 3 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAWLLKE*RTLGTT
Trigger: TGTTGTTCCCAGTGTTCTCAATTCTTTAAGCAACCA...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CCA 72 bp ACTTATGTGGTGCTGTCATCATTTTGCACTGCTACTTaGCACACTAAAAACTGCAGTAATGCAGTTACCAGC +
Preference number: 3 (lower is better)
Translates to: TYVVLSSFCTAT*HTKNCSNAVTS
Trigger: GCTGGTAACTGCATTACTGCAGTTTTTAGTGTGCCAAGTAGCAGTGCAAAATGATGACAGCACCACATAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CCA 72 bp AATGGCAGAGTTGAACAAATGCAAAGGAGACTTATGTaGTGCTGTCATCATTTTGCACTGCTACTTGGCACA +
Preference number: 3 (lower is better)
Translates to: NGRVEQMQRRLM*CCHHFALLLGT
Trigger: TGTGCCAAGTAGCAGTGCAAAATGATGACAGCACCACATAAGTCTCCTTTGCATTTGTTCAACTCTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CAA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGAAGGGACTTGCTATATaGCCCAGGTTGGAGTGCAGT +
Preference number: 3 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLKGLAI*PRLECS
Trigger: ACTGCACTCCAACCTGGGCAATATAGCAAGTCCCTT...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CCA 72 bp ATGGGCAAACATGGATTAACTGACTCGAAAATACTCTaGAATAGGGGTCACAAATTTGGTCCACAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: MGKHGLTDSKIL*NRGHKFGPQAK
Trigger: TTTGGCTTGTGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATGTTTGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTGCCACGATACTTTATaGCTCAGTGTTCCTTTGAAA +
Preference number: 3 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMCHDTL*LSVPLK
Trigger: TTTCAAAGGAACACTGAGCAATAAAGTATCGTGGCA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
3UTR TCA 72 bp CTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTaGACAAATGCAAAGGAGACTTATGTGGTGCTGTCA +
Preference number: 3 (lower is better)
Translates to: LSMIAFTLEWQS*TNAKETYVVLS
Trigger: TGACAGCACCACATAAGTCTCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR GCA 72 bp AATGCAAAGGAGACTTATGTGGTGCTGTCATCATTTTaGACTGCTACTTGGCACACTAAAAACTGCAGTAAT +
Preference number: 3 (lower is better)
Translates to: NAKETYVVLSSF*TATWHTKNCSN
Trigger: ATTACTGCAGTTTTTAGTGTGCCAAGTAGCAGTGCAAAATGATGACAGCACCACATAAGTCTCCTTTGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR GCA 72 bp ATGGCCACACTCATTCGTTTAGGTACTGTCTATGATTaGTTTCACATTAGAATGGCAGAGTTGAACAAATGC +
Preference number: 3 (lower is better)
Translates to: MATLIRLGTVYD*FHIRMAELNKC
Trigger: GCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGTACCTAAACGAATGAGTGTGGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CAA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCTGCCACGATACTTTATaGCTCAGTGTTCCTTTGAAA +
Preference number: 3 (lower is better)
Translates to: QNRYIPASTHPSKIYISLCHDTL*LSVPLK
Trigger: TTTCAAAGGAACACTGAGCAATAAAGTATCGTGGCA...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CAA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAGTGACTACTGAACACTaGACATACATCGTTTTGTTA +
Preference number: 3 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPVTTEH*TYIVLL
Trigger: TAACAAAACGATGTATGTCAAGTGTTCAGTAGTCAC...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR TCA 72 bp CCCAACCACATTGGCATAATAGTGTTAGTTCTATTGTaGGCTTTTGCGTTCAGGGCTGATATTGACATTTTT +
Preference number: 3 (lower is better)
Translates to: PNHIGIIVLVLL*AFAFRADIDIF
Trigger: AAAAATGTCAATATCAGCCCTGAACGCAAAAGCTCACAATAGAACTAACACTATTATGCCAATGTGGTTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR GCA 72 bp TTACAAGTAACAACAAGCTGCTTTACACATTTCCTGTaGTATCAAAAGGTAAGACAAAGAAGCGAGATCTCC +
Preference number: 3 (lower is better)
Translates to: LQVTTSCFTHFL*YQKVRQRSEIS
Trigger: GGAGATCTCGCTTCTTTGTCTTACCTTTTGATAGCACAGGAAATGTGTAAAGCAGCTTGTTGTTACTTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR-3UTR CAA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGACTAGCTCTGACCATTTaGTACATACCAAACAAAACA +
Preference number: 3 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGLALTI*YIPNKT
Trigger: TGTTTTGTTTGGTATGTACAAAATGGTCAGAGCTAG...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR TCA 72 bp TATTGCTTATTTGATAAGTCAATGCCAACGTTGAAGTaGCTGAAATTAGTCTCTATGAATTATCTGTGTGGC +
Preference number: 3 (lower is better)
Translates to: YCLFDKSMPTLK*LKLVSMNYLCG
Trigger: GCCACACAGATAATTCATAGAGACTAATTTCAGTCACTTCAACGTTGGCATTGACTTATCAAATAAGCAATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CCA 72 bp AAGACATGTCCTCAATCACTATTATGGAACACTGAATaGCTTTGGAATTTAGCTTTTGCTCAAGACTTAATA +
Preference number: 3 (lower is better)
Translates to: KTCPQSLLWNTE*LWNLAFAQDLI
Trigger: TATTAAGTCTTGAGCAAAAGCTAAATTCCAAAGCCATTCAGTGTTCCATAATAGTGATTGAGGACATGTCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CCA 72 bp TTTCTGAAAAAGAAGACATGTCCTCAATCACTATTATaGAACACTGAATGGCTTTGGAATTTAGCTTTTGCT +
Preference number: 3 (lower is better)
Translates to: FLKKKTCPQSLL*NTEWLWNLAFA
Trigger: AGCAAAAGCTAAATTCCAAAGCCATTCAGTGTTCCATAATAGTGATTGAGGACATGTCTTCTTTTTCAGAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGGTGTGCCAGTCTGGTaGAGCACCCGGTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMGVPVW*STRCCS
Trigger: AGAGCAGCACCGGGTGCTTCACCAGACTGGCACACC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGGTGGGAGGATCGCTTaGGCCTGGGAGACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMGGRIA*AWETEA
Trigger: AGCCTCAGTCTCCCAGGCTCAAGCGATCCTCCCACC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCCCCGACTCTCTAGATaGGGCACAACCGCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMPRLSR*GTTAAS
Trigger: GCTTGCGGCGGTTGTGCCGCATCTAGAGAGTCGGGG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCACCCGGTGCTGCTCTaGAGAGTTGGGCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMHPVLL*RVGHQP
Trigger: TGGCTGGTGCCCAACTCTGCAGAGCAGCACCGGGTG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGGCAGGAGACTCGCTTaGACCTGCAGGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMGRRLA*TCRVEV
Trigger: AACCTCCACCCTGCAGGTTCAAGCGAGTCTCCTGCC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGGGTGTGCCAGTCTGGTaGAGCACCCGGTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLGVPVW*STRCCS
Trigger: AGAGCAGCACCGGGTGCTTCACCAGACTGGCACACC...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCAGCCAGAAGCTACCCTaGACACCTAAAAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: TGKDLEHTYCCAKGIILASQKLP*TPKSTG
Trigger: ACCTGTGCTTTTAGGTGTTCAGGGTAGCTTCTGGCT...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGACCCCGACTCTCTAGATaGGGCACAACCGCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGPRLSR*GTTAAS
Trigger: GCTTGCGGCGGTTGTGCCGCATCTAGAGAGTCGGGG...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGACATTCTTTTACCCTaGAGGGTCCGGGAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMDILLP*RVRERR
Trigger: GCGCCTCTCCCGGACCCTGCAGGGTAAAAGAATGTC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229971.2
CDS-3UTR GCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGCACCCGGTGCTGCTCTaGAGAGTTGGGCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLHPVLL*RVGHQP
Trigger: TGGCTGGTGCCCAACTCTGCAGAGCAGCACCGGGTG...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGTTTGGGAGCTGGTGTaGCAGTCTGGTGAAGCACCC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMVWELV*QSGEAP
Trigger: GGGTGCTTCACCAGACTGGCACACCAGCTCCCAAAC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGCTGCTCTGCAGAGTTaGGCACCAGCCAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMAALQS*APAKVK
Trigger: CTTGACCTTGGCTGGTGCCCAACTCTGCAGAGCAGC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCTTCATCCAGGTACCCTaGACTTTGCATGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAFIQVP*TLHADF
Trigger: GAAGTCAGCATGCAAAGTTCAGGGTACCTGGATGAA...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGGACTACCTCTGCATTaGGAGGGGAAGTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMGLPLH*EGKSGC
Trigger: ACAGCCAGACTTCCCCTCTCAATGCAGAGGTAGTCC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCCCTAAACTGAGGTGCTaGAGCTCTGAACAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAPKLRC*SSEQKF
Trigger: GAACTTCTGTTCAGAGCTTCAGCACCTCAGTTTAGG...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCCAGGAAGAAAAATCCTaGAGGGTCCGGGAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLQEEKS*RVRERR
Trigger: GCGCCTCTCCCGGACCCTGCAGGATTTTTCTTCCTG...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCACAGGTTGGAGTGCAGTaGCTGCTCACAGGTGCAATC +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPQVGVQ*LLTGAI
Trigger: GATTGCACCTGTGAGCAGCCACTGCACTCCAACCTG...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACCTTCGTAGGTCTCTCTaGCCAAAGAATCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: NDPEWFSLALDESTDVTDLRRSL*PKNLPS
Trigger: AGATGGGAGATTCTTTGGTCAGAGAGACCTACGAAG...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCGAGGCTGCAGTAAGCTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLEAAVS*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCTTACTGCAGCCTC...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACATACTGGACTACCTCTaGATTGAGAGGGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: NDPEWFSLALDESTDVTDILDYL*IERGSL
Trigger: CAGACTTCCCCTCTCAATGCAGAGGTAGTCCAGTAT...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGGTTTGGGAGCTGGTGTaGCAGTCTGGTGAAGCACCC +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLVWELV*QSGEAP
Trigger: GGGTGCTTCACCAGACTGGCACACCAGCTCCCAAAC...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCGGGAAATGCAAAAGTTaGCATTCATCCAGGTACCCT +
Preference number: 4 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAGKCKS*HSSRYP
Trigger: AGGGTACCTGGATGAATGCCAACTTTTGCATTTCCC...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACAAAATACCCATTATTTaGCCCTTCCCCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: NDPEWFSLALDESTDVTDKIPII*PFPEDS
Trigger: GCTGTCCTCGGGGAAGGGCCAAATAATGGGTATTTT...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTGCAAGTTTGGGAGCTaGTGTGCCAGTCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMCKFGS*CASLVK
Trigger: CTTCACCAGACTGGCACACCAGCTCCCAAACTTGCA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACGATCAAGAGGAAGACTaGAGACTCCTATCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NDPEWFSLALDESTDVTDDQEED*RLLSSF
Trigger: GAAGCTGGATAGGAGTCTCCAGTCTTCCTCTTGATC...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACGCTTCAGAAGCCAGATaGCCTGGGTTTATATGTTGG +
Preference number: 4 (lower is better)
Translates to: NDPEWFSLALDESTDVTDASEAR*PGFICW
Trigger: CCAACATATAAACCCAGGCCATCTGGCTTCTGAAGC...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CAA 72 bp ACAAGGCAAATGACCCTGAGTGGTTTTCCTTGGCTCTaGATGAGTCAACAGATGTTACTGACACTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: TRQMTLSGFPWL*MSQQMLLTLPS
Trigger: ACTAGGCAGTGTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATTTGCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAGGACTACCTCTGCATTaGGAGGGGAAGTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGGLPLH*EGKSGC
Trigger: ACAGCCAGACTTCCCCTCTCAATGCAGAGGTAGTCC...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGATCCTGCAACAGAGATaGAGCCTCTATTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMILQQR*SLYCQS
Trigger: GGACTGGCAATAGAGGCTTCATCTCTGTTGCAGGAT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCACAACTGCCTAAACTaGGGTGCTGAAGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMHNCLN*GAEALN
Trigger: GTTCAGAGCTTCAGCACCTCAGTTTAGGCAGTTGTG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACGTGTTAGTTCTATTGTaGGCTTTTGCGTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NDPEWFSLALDESTDVTDVLVLL*AFAFRA
Trigger: AGCCCTGAACGCAAAAGCTCACAATAGAACTAACAC...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGGGGTGGAGGTTGCAGTaGACTGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLGWRLQ*TEIVPL
Trigger: CAGTGGCACAATCTCAGTTCACTGCAACCTCCACCC...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGTTGAGCCTGGGAGACTaGGGCTGCAGTAAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLLSLGD*GCSKLR
Trigger: TCTCAGCTTACTGCAGCCTCAGTCTCCCAGGCTCAA...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGAACATACATGGGGCCTaGCACAGTGGCTTATGCCCG +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLNIHGA*HSGLCP
Trigger: CGGGCATAAGCCACTGTGTCAGGCCCCATGTATGTT...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCGAGAATTCTAATGACTaGTCCGGGATGATAGGTTTC +
Preference number: 4 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAENSND*SGMIGF
Trigger: GAAACCTATCATCCCGGAGCAGTCATTAGAATTCTC...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACACAGGTTTAATGCAATaGTTCAGAAGCCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: NDPEWFSLALDESTDVTDTGLMQ*FRSQMA
Trigger: GGCCATCTGGCTTCTGAAGCATTGCATTAAACCTGT...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCACTTCTTTGGCATACTaGACTACCTCTGCATTGAGA +
Preference number: 4 (lower is better)
Translates to: TGKDLEHTYCCAKGIILATSLAY*TTSALR
Trigger: TCTCAATGCAGAGGTAGTCCAGTATGCCAAAGAAGT...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTGGCGTCCTCTTGAATaGCAAGGAAGCACTAGGACA +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMWRPLE*QGSTRT
Trigger: TGTCCTAGTGCTTCCTTGCCATTCAAGAGGACGCCA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCTGCAAGTTTGGGAGCTaGTGTGCCAGTCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLCKFGS*CASLVK
Trigger: CTTCACCAGACTGGCACACCAGCTCCCAAACTTGCA...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTTCATCCAGGTACCCTaGACTTTGCATGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMFIQVP*TLHADF
Trigger: GAAGTCAGCATGCAAAGTTCAGGGTACCTGGATGAA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACCATGGGAAAGACCGGTaGCATCTAGATGTGAATTAT +
Preference number: 4 (lower is better)
Translates to: NDPEWFSLALDESTDVTDHGKDR*HLDVNY
Trigger: ATAATTCACATCTAGATGTCACCGGTCTTTCCCATG...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCTTCGTAGGTCTCTCTaGCCAAAGAATCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMLRRSL*PKNLPS
Trigger: AGATGGGAGATTCTTTGGTCAGAGAGACCTACGAAG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCATCCTGCAACAGAGATaGAGCCTCTATTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLILQQR*SLYCQS
Trigger: GGACTGGCAATAGAGGCTTCATCTCTGTTGCAGGAT...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGACTTGGCAATGTGGTTaGAAGCTTGAGGTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMTWQCG*KLEVVA
Trigger: AGCTACCACCTCAAGCTTTCAACCACATTGCCAAGT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCCTAAACTGAGGTGCTaGAGCTCTGAACAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMPKLRC*SSEQKF
Trigger: GAACTTCTGTTCAGAGCTTCAGCACCTCAGTTTAGG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCCACAACTGCCTAAACTaGGGTGCTGAAGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLHNCLN*GAEALN
Trigger: GTTCAGAGCTTCAGCACCTCAGTTTAGGCAGTTGTG...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCGTGTCCTCAGTAAGATaGATGAACTCTTTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAVSSVR*MNSLKD
Trigger: ATCCTTCAAAGAGTTCATGCATCTTACTGAGGACAC...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGATACTGGACTACCTCTaGATTGAGAGGGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMILDYL*IERGSL
Trigger: CAGACTTCCCCTCTCAATGCAGAGGTAGTCCAGTAT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGCCACTGGACAAGAGTaGAGCGAGACTGTAGAAATT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMATGQE*SETVEI
Trigger: AATTTCTACAGTCTCGCTGCACTCTTGTCCAGTGGC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCCAAAATGCTGAGCAGTaGTGTTTGCTCTACTTTTGT +
Preference number: 4 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAQNAEQ*CLLYFC
Trigger: ACAAAAGTAGAGCAAACAGCACTGCTCAGCATTTTG...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACGCTCTGTTATCAATCTaGGAACAGAAGGACACATCA +
Preference number: 4 (lower is better)
Translates to: NDPEWFSLALDESTDVTDALLSI*EQKDTS
Trigger: TGATGTGTCCTTCTGTTCGCAGATTGATAACAGAGC...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACCAATTGAGGAGCTTCTaGCTAGTCTTCAATTGGAAG +
Preference number: 4 (lower is better)
Translates to: NDPEWFSLALDESTDVTDQLRSF*LVFNWK
Trigger: CTTCCAATTGAAGACTAGGCAGAAGCTCCTCAATTG...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACATACAAGGTTTAAACTaGCGAGCTTGGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: NDPEWFSLALDESTDVTDIQGLN*RAWEAF
Trigger: GAATGCTTCCCAAGCTCGCCAGTTTAAACCTTGTAT...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGAAAATACCCATTATTTaGCCCTTCCCCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMKIPII*PFPEDS
Trigger: GCTGTCCTCGGGGAAGGGCCAAATAATGGGTATTTT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGGATCACAGCAATGCTaGCTCAGTAGTTTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMGSQQC*LSSLQV
Trigger: GACTTGCAAACTACTGAGCCAGCATTGCTGTGATCC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAGGATCACAGCAATGCTaGCTCAGTAGTTTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPGSQQC*LSSLQV
Trigger: GACTTGCAAACTACTGAGCCAGCATTGCTGTGATCC...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGAGTTTTTGCAAGTTTaGGAGCTGGTGTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMEFLQV*ELVCQS
Trigger: AGACTGGCACACCAGCTCCCAAACTTGCAAAAACTC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAGAGTTTTTGCAAGTTTaGGAGCTGGTGTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPEFLQV*ELVCQS
Trigger: AGACTGGCACACCAGCTCCCAAACTTGCAAAAACTC...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGACTATATTGCCCAGGTTaGAGTGCAGTGGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGLYCPG*SAVAAH
Trigger: GTGAGCAGCCACTGCACTCCAACCTGGGCAATATAG...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAGTAATCCAAGCATTTTaGGAGGCTGAAGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPVIQAF*EAEVGG
Trigger: TCCACCCACTTCAGCCTCCCAAAATGCTTGGATTAC...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCTGAACTTTGCATGCTaGCTTCAGGTACAAATGCTG +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMLNFAC*LQVQML
Trigger: CAGCATTTGTACCTGAAGTCAGCATGCAAAGTTCAG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCACTGAACTTTGCATGCTaGCTTCAGGTACAAATGCTG +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPLNFAC*LQVQML
Trigger: CAGCATTTGTACCTGAAGTCAGCATGCAAAGTTCAG...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGGAAGTCTGGCTGTTTaGTTCTATAGCTCTATGGGT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMGSLAV*FYSSMG
Trigger: ACCCATAGAGCTATAGAATCAAACAGCCAGACTTCC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCGAAACACAGCTGTCTaGGTAAAGTCACCAGAACTT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMRNTAV*VKSPEL
Trigger: AAGTTCTGGTGACTTTACTCAGACAGCTGTGTTTCG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCACGAAACACAGCTGTCTaGGTAAAGTCACCAGAACTT +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPRNTAV*VKSPEL
Trigger: AAGTTCTGGTGACTTTACTCAGACAGCTGTGTTTCG...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGAGTATGGTTGCAGATTaGGGTGGATGTATTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMSMVAD*GGCIAE
Trigger: CTCTGCAATACATCCACCTCAATCTGCAACCATACT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAAGTATGGTTGCAGATTaGGGTGGATGTATTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPSMVAD*GGCIAE
Trigger: CTCTGCAATACATCCACCTCAATCTGCAACCATACT...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGATGTGGTTGAAAGCTTaGGGTGGTAGCTTATCACAG +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMMWLKA*GGSLSQ
Trigger: CTGTGATAAGCTACCACCTCAAGCTTTCAACCACAT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCACTTGGCAATGTGGTTaGAAGCTTGAGGTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLTWQCG*KLEVVA
Trigger: AGCTACCACCTCAAGCTTTCAACCACATTGCCAAGT...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGAGGTGCTGAAGCTCTaGACAGAAGTTCAAAATGCT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMEVLKL*TEVQNA
Trigger: AGCATTTTGAACTTCTGTTCAGAGCTTCAGCACCTC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCGCAGTTAATGGTCATTaGCAAGATTTTAAGGGTAGT +
Preference number: 4 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAAVNGH*QDFKGS
Trigger: ACTACCCTTAAAATCTTGTCAATGACCATTAACTGC...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGAGGTACCCTGAACTTTaGATGCTGACTTCAGGTACA +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMRYPEL*MLTSGT
Trigger: TGTACCTGAAGTCAGCATGCAAAGTTCAGGGTACCT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGCTGGCTCAGTAGTTTaGAAGTCTGTGCTAATCTAC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMAGSVV*KSVLIY
Trigger: GTAGATTAGCACAGACTTGCAAACTACTGAGCCAGC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTTGAGGTGGATGTATTaGAGAGGATCACAGCAATGC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMLRWMY*RGSQQC
Trigger: GCATTGCTGTGATCCTCTGCAATACATCCACCTCAA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGGGAAATGCAAAAGTTaGCATTCATCCAGGTACCCT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMGKCKS*HSSRYP
Trigger: AGGGTACCTGGATGAATGCCAACTTTTGCATTTCCC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTGTTCCCAGATAGAATaGTCACAGGATACACATGGG +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMCSQIE*SQDTHG
Trigger: CCCATGTGTATCCTGTGACCATTCTATCTGGGAACA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGTGGCGTCCTCTTGAATaGCAAGGAAGCACTAGGACA +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLWRPLE*QGSTRT
Trigger: TGTCCTAGTGCTTCCTTGCCATTCAAGAGGACGCCA...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGCTCTGAAAATTAGGTaGCGTCCTCTTGAATGGCAA +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMALKIR*RPLEWQ
Trigger: TTGCCATTCAAGAGGACGCCACCTAATTTTCAGAGC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCCATCTTACTTCAGCTaGTGGATTTGGGGAATAAGG +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMPSYFS*WIWGIR
Trigger: CCTTATTCCCCAAATCCACCAGCTGAAGTAAGATGG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTTAAACTGGCGAGCTTaGGAAGCATTCACCTTCGTA +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMLNWRA*EAFTFV
Trigger: TACGAAGGTGAATGCTTCCCAAGCTCGCCAGTTTAA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGGTTGCAGATTGAGGTaGATGTATTGCAGAGGATCA +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMGCRLR*MYCRGS
Trigger: TGATCCTCTGCAATACATCCACCTCAATCTGCAACC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAGGTTGCAGATTGAGGTaGATGTATTGCAGAGGATCA +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPGCRLR*MYCRGS
Trigger: TGATCCTCTGCAATACATCCACCTCAATCTGCAACC...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGATAAATTAAGCCACTaGACAAGAGTGCAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMDKLSH*TRVQRD
Trigger: GTCTCGCTGCACTCTTGTCCAGTGGCTTAATTTATC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAGATAAATTAAGCCACTaGACAAGAGTGCAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPDKLSH*TRVQRD
Trigger: GTCTCGCTGCACTCTTGTCCAGTGGCTTAATTTATC...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGACAAATGCTGACATGTaGCATTCTTTTACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMTNADM*HSFTLQ
Trigger: CTGCAGGGTAAAAGAATGTCACATGTCAGCATTTGT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229971.2
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCATGGGAAAGACCGGTaGCATCTAGATGTGAATTAT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMHGKDR*HLDVNY
Trigger: ATAATTCACATCTAGATGTCACCGGTCTTTCCCATG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGAGAAGTTCAAAATGCTaGGCAGTGCTGTTTGCTCTA +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMRSSKC*AVLFAL
Trigger: TAGAGCAAACAGCACTGCTCAGCATTTTGAACTTCT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCATCCTCATGTGACTACTaGACACTTGACATACATCGT +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPSSCDY*TLDIHR
Trigger: ACGATGTATGTCAAGTGTTCAGTAGTCACATGAGGA...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACCAAACATGGATTAACTaGCTCGAAAATACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: NDPEWFSLALDESTDVTDQTWIN*LENTLE
Trigger: TTCCAGAGTATTTTCGAGTCAGTTAATCCATGTTTG...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAGGTGGGAAAATTATTTaGGCCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGGGKII*AQEFKT
Trigger: GGTCTTGAACTCCTGGGCTCAAATAATTTTCCCACC...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCAGGTACCCTGAACTTTaGATGCTGACTTCAGGTACA +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLRYPEL*MLTSGT
Trigger: TGTACCTGAAGTCAGCATGCAAAGTTCAGGGTACCT...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGAGAATTCTAATGACTaGTCCGGGATGATAGGTTTC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMENSND*SGMIGF
Trigger: GAAACCTATCATCCCGGAGCAGTCATTAGAATTCTC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTTTGCCCAGTATGGTTaGAGATTGAGGTGGATGTAT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMFAQYG*RLRWMY
Trigger: ATACATCCACCTCAATCTGCAACCATACTGGGCAAA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGGCCACTGGACAAGAGTaGAGCGAGACTGTAGAAATT +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLATGQE*SETVEI
Trigger: AATTTCTACAGTCTCGCTGCACTCTTGTCCAGTGGC...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCCCAGAAGCCAGTTCTaGTATTCCATTCTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMPRSQF*YSILSN
Trigger: ATTACTGAGAATGGAATAGCAGAACTGGCTTCTGGG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGCTCTGTTATCAATCTaGGAACAGAAGGACACATCA +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMALLSI*EQKDTS
Trigger: TGATGTGTCCTTCTGTTCGCAGATTGATAACAGAGC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCACTTGAGCACACTTACTaGTGTGCCAAAGGAATAATC +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPLEHTY*CAKGII
Trigger: GATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAG...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCTGTTCCCAGATAGAATaGTCACAGGATACACATGGG +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLCSQIE*SQDTHG
Trigger: CCCATGTGTATCCTGTGACCATTCTATCTGGGAACA...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTCAGAACTGTTAACATaGGAAAGACCGGTGACATCT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMSELLT*ERPVTS
Trigger: AGATGTCACCGGTCTTTCCCATGTTAACAGTTCTGA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGACTTCTTTGGCATACTaGACTACCTCTGCATTGAGA +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMTSLAY*TTSALR
Trigger: TCTCAATGCAGAGGTAGTCCAGTATGCCAAAGAAGT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCCCATCTTACTTCAGCTaGTGGATTTGGGGAATAAGG +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLPSYFS*WIWGIR
Trigger: CCTTATTCCCCAAATCCACCAGCTGAAGTAAGATGG...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGATACAAGGTTTAAACTaGCGAGCTTGGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMIQGLN*RAWEAF
Trigger: GAATGCTTCCCAAGCTCGCCAGTTTAAACCTTGTAT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCCAGCTGCTGTAACCTaGTACAATTACATGCCAATT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMPAAVT*YNYMPI
Trigger: AATTGGCATGTAATTGTACCAGGTTACAGCAGCTGG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCCTCATGAAATTTTATTaGAACATGGCCACACTCATT +
Preference number: 4 (lower is better)
Translates to: TGKDLEHTYCCAKGIILALMKFY*NMATLI
Trigger: AATGAGTGTGGCCATGTTCCAATAAAATTTCATGAG...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAGGAAGTCTGGCTGTTTaGTTCTATAGCTCTATGGGT +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGGSLAV*FYSSMG
Trigger: ACCCATAGAGCTATAGAATCAAACAGCCAGACTTCC...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTTCCATAATGGGAACTaGAATCCACTACTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMFHNGN*NPLLLW
Trigger: CCAAAGAAGTAGTGGATTTCAGTTCCCATTATGGAA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGAGCTTCAAAGCTTCTTaGAAATCCAAGCGAATGAAG +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMSFKAS*KSKRMK
Trigger: CTTCATTCGCTTGGATTTTCAAGAAGCTTTGAAGCT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGGTTGCTTAAAGAATTaGGAACACTGGGAACAACAT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMGCLKN*EHWEQH
Trigger: ATGTTGTTCCCAGTGTTCTCAATTCTTTAAGCAACC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGATACACATGGGAAATaGAAAAGTTGGCATTCATCC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMDTHGK*KSWHSS
Trigger: GGATGAATGCCAACTTTTGCATTTCCCATGTGTATC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGTGTCCTCAGTAAGATaGATGAACTCTTTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMVSSVR*MNSLKD
Trigger: ATCCTTCAAAGAGTTCATGCATCTTACTGAGGACAC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTGGGGAATAAGGATTTaGAGAACAAGCGAGAATTCT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMWGIRI*RTSENS
Trigger: AGAATTCTCGCTTGTTCTGCAAATCCTTATTCCCCA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGGCTGGCTCAGTAGTTTaGAAGTCTGTGCTAATCTAC +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLAGSVV*KSVLIY
Trigger: GTAGATTAGCACAGACTTGCAAACTACTGAGCCAGC...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCAAAATGCTGAGCAGTaGTGTTTGCTCTACTTTTGT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMQNAEQ*CLLYFC
Trigger: ACAAAAGTAGAGCAAACAGCACTGCTCAGCATTTTG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCCCCAGAAGCCAGTTCTaGTATTCCATTCTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLPRSQF*YSILSN
Trigger: ATTACTGAGAATGGAATAGCAGAACTGGCTTCTGGG...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCCTAATATGTCCAGCTaGTGTAACCTGGTACAATTA +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMPNMSS*CNLVQL
Trigger: TAATTGTACCAGGTTACAGCAGCTGGACATATTAGG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGACCAAACAAAACACTTaGCAGGTCACAGGCTTAATA +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMTKQNT*QVTGLI
Trigger: TATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAGTGGCTGCTCACAGGTaGAATCATAAGTACACTAGA +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGVAAHR*NHKYTR
Trigger: TCTAGTGTACTTATGATTGCACCTGTGAGCAGCCAC...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACCATTGTCCTGTTAAGTaGAAAATCGTTATATTCCAG +
Preference number: 4 (lower is better)
Translates to: NDPEWFSLALDESTDVTDHCPVK*KIVIFQ
Trigger: CTGGAATATAACGATTTTGCACTTAACAGGACAATG...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAGTGCTGTCATCATTTTaGACTGCTACTTGGCACACT +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGVLSSF*TATWHT
Trigger: AGTGTGCCAAGTAGCAGTGCAAAATGATGACAGCAC...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAGCAGAGTTGAACAAATaGAAAGGAGACTTATGTGGT +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPAELNK*KGDLCG
Trigger: ACCACATAAGTCTCCTTTGCATTTGTTCAACTCTGC...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGACTTGGGAATACATTTaGTACACCAGCCAAATTCCA +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMTWEYI*YTSQIP
Trigger: TGGAATTTGGCTGGTGTACCAAATGTATTCCCAAGT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGGCTCTGAAAATTAGGTaGCGTCCTCTTGAATGGCAA +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLALKIR*RPLEWQ
Trigger: TTGCCATTCAAGAGGACGCCACCTAATTTTCAGAGC...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTCTTACTTCAGCTGGTaGATTTGGGGAATAAGGATT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMSYFSW*IWGIRI
Trigger: AATCCTTATTCCCCAAATCCACCAGCTGAAGTAAGA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGATTAAACTGGCGAGCTTaGGAAGCATTCACCTTCGTA +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGLNWRA*EAFTFV
Trigger: TACGAAGGTGAATGCTTCCCAAGCTCGCCAGTTTAA...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGTGTGCCACCACACCTaGCTAGAAAAACTAAAAATT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMVCHHT*LEKLKI
Trigger: AATTTTTAGTTTTTCTAGCCAGGTGTGGTGGCACAC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCACAAAGGAGACTTATGTaGTGCTGTCATCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPQRRLM*CCHHFA
Trigger: TGCAAAATGATGACAGCACCACATAAGTCTCCTTTG...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTTCTCTGCTACATATTaGCTCAAAAGTAAGCACCTG +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMFSATY*LKSKHL
Trigger: CAGGTGCTTACTTTTGAGCCAATATGTAGCAGAGAA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CAA 72 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTaGAACAAATGCAAAGGAGACTTATGTGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAE*NKCKGDLCGAV
Trigger: GACAGCACCACATAAGTCTCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTTCAGGTACAAATGCTaGCATGTGACATTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMFRYKC*HVTFFY
Trigger: GTAAAAGAATGTCACATGTCAGCATTTGTACCTGAA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTCTAGATGTGAATTATaGAGCTTCAAAAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMSRCEL*SFKRSG
Trigger: ACCTGACCTTTTGAAGCTTCATAATTCACATCTAGA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGATTCATGTCAATAAGTaGAGTCTTGAGAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMIHVNK*SLERKH
Trigger: GTGCTTTCTCTCAAGACTTCACTTATTGACATGAAT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR TCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAATTCATGTCAATAAGTaGAGTCTTGAGAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPIHVNK*SLERKH
Trigger: GTGCTTTCTCTCAAGACTTCACTTATTGACATGAAT...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAAGAAGTTCAAAATGCTaGGCAGTGCTGTTTGCTCTA +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGRSSKC*AVLFAL
Trigger: TAGAGCAAACAGCACTGCTCAGCATTTTGAACTTCT...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAGAAAATCCAAGCGAATaGAGCAAATGGAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGENPSE*SKWRRQ
Trigger: TTGCCTTCTCCATTTGCTTCATTCGCTTGGATTTTC...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGACAACCATCCTTTTCTaGATAGGCATCATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMTTILF*IGIIFY
Trigger: ATAGAAGATGATGCCTATGCAGAAAAGGATGGTTGT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAACAACCATCCTTTTCTaGATAGGCATCATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPTTILF*IGIIFY
Trigger: ATAGAAGATGATGCCTATGCAGAAAAGGATGGTTGT...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCCTGGTACAATTACATaGCAATTCATCAATGTCTGT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMPGTIT*QFINVC
Trigger: ACAGACATTGATGAATTGGCATGTAATTGTACCAGG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR GCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAAGGAGACTTATGTGGTaGTGTCATCATTTTGCACTG +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGRRLMW*CHHFAL
Trigger: CAGTGCAAAATGATGACAGCACCACATAAGTCTCCT...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGATTCTATAGCTCTATaGGTGTTCATCATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMDSIAL*VFIISP
Trigger: AGGAGAAATGATGAACACCCATAGAGCTATAGAATC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCTCTTACTTCAGCTGGTaGATTTGGGGAATAAGGATT +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLSYFSW*IWGIRI
Trigger: AATCCTTATTCCCCAAATCCACCAGCTGAAGTAAGA...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGACCAGCTGCTGTAACCTaGTACAATTACATGCCAATT +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGPAAVT*YNYMPI
Trigger: AATTGGCATGTAATTGTACCAGGTTACAGCAGCTGG...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CAA 72 bp AACAGTGCAATTGAGGAGCTTCTGCCTAGTCTTCAATaGGAAGTGATTAAGCTGCAATGTAATAACATGCTA +
Preference number: 4 (lower is better)
Translates to: NSAIEELLPSLQ*EVIKLQCNNML
Trigger: TAGCATGTTATTACATTGCAGCTTAATCACTTCCAATTGAAGACTAGGCAGAAGCTCCTCAATTGCACTGTT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCTCTAGATGTGAATTATaGAGCTTCAAAAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLSRCEL*SFKRSG
Trigger: ACCTGACCTTTTGAAGCTTCATAATTCACATCTAGA...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCACTATTATGGAACACTaGATGGCTTTGGAATTTAGC +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLTIMEH*MALEFS
Trigger: GCTAAATTCCAAAGCCATTCAGTGTTCCATAATAGT...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGTTAGAATGGCAGAGTTaGACAAATGCAAAGGAGACT +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLLEWQS*TNAKET
Trigger: AGTCTCCTTTGCATTTGTTCAACTCTGCCATTCTAA...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAGATACACATGGGAAATaGAAAAGTTGGCATTCATCC +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGDTHGK*KSWHSS
Trigger: GGATGAATGCCAACTTTTGCATTTCCCATGTGTATC...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGATGGGGAATAAGGATTTaGAGAACAAGCGAGAATTCT +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGWGIRI*RTSENS
Trigger: AGAATTCTCGCTTGTTCTGCAAATCCTTATTCCCCA...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGACCAAACAAAACACTTaGCAGGTCACAGGCTTAATA +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLTKQNT*QVTGLI
Trigger: TATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGT...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGACAAGTAACAACAAGCTaGTTTACACATTTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGQVTTS*FTHFLC
Trigger: GCACAGGAAATGTGTAAAGCAGCTTGTTGTTACTTG...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCGATTCTATAGCTCTATaGGTGTTCATCATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QNRYIPASTHPSKIYISLDSIAL*VFIISP
Trigger: AGGAGAAATGATGAACACCCATAGAGCTATAGAATC...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAGTGTGCCACCACACCTaGCTAGAAAAACTAAAAATT +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGVCHHT*LEKLKI
Trigger: AATTTTTAGTTTTTCTAGCCAGGTGTGGTGGCACAC...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGTTTTGCACTGCTACTTaGCACACTAAAAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLFCTAT*HTKNCS
Trigger: ACTGCAGTTTTTAGTGTGCCAAGTAGCAGTGCAAAA...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGATTCAGGTACAAATGCTaGCATGTGACATTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGFRYKC*HVTFFY
Trigger: GTAAAAGAATGTCACATGTCAGCATTTGTACCTGAA...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR TCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAAAATATTTTGTGGCATaGAAAGGCACAGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGKYFVA*KGTAVL
Trigger: CAAAACAGCTGTGCCTTTTCATGCCACAAAATATTT...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGCCTGGTACAATTACATaGCAATTCATCAATGTCTGT +
Preference number: 4 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLPGTIT*QFINVC
Trigger: ACAGACATTGATGAATTGGCATGTAATTGTACCAGG...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR GCA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAGGTACTGTCTATGATTaGTTTCACATTAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGGTVYD*FHIRMA
Trigger: TGCCATTCTAATGTGAAAGCAATCATAGACAGTACC...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CAA 72 bp CACACTAAAAACTGCAGTAATGCAGTTACCAGCATTTaGAGTGCCACATATGTTGTCATACCACAATATTTT +
Preference number: 4 (lower is better)
Translates to: HTKNCSNAVTSI*SATYVVIPQYF
Trigger: AAAATATTGTGGTATGACAACATATGTGGCACTCAAAATGCTGGTAACTGCATTACTGCAGTTTTTAGTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CAA 72 bp TATCTTTTGTCAGATACAGAAGATGAATATGCTGATTaGCCCAACCACATTGGCATAATAGTGTTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: YLLSDTEDEYAD*PNHIGIIVLVL
Trigger: TAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATCTTCTGTATCTGACAAAAGATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
3UTR CAA 72 bp AAATTAGCCTTTTGGCAAGAATGGTTGCTTAAAGAATaGAGAACACTGGGAACAACATCAACAGTCAATAAA +
Preference number: 4 (lower is better)
Translates to: KLAFWQEWLLKE*RTLGTTSTVNK
Trigger: TTTATTGACTGTTGATGTTGTTCCCAGTGTTCTCAATTCTTTAAGCAACCATTCTTGCCAAAAGGCTAATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS CCA 90 bp CGCGCGCCGCGGGCTTCACCAGCGACCAGGCAGCGCGAGAAGGCCTaGGTGCGGGGGCGGCTCCCCGACTCTCTAGATGCGGCACAACCG +
Preference number: 5 (lower is better)
Translates to: RAPRASPATRQREKA*VRGRLPDSLDAAQP
Trigger: CGGTTGTGCCGCATCTAGAGAGTCGGGGAGCCGCCCCCGCACCCAGGCCTTCTCGCGCTGCCTGGTCGCTGGTGAAGCCCGCGGCGCGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS GCA 90 bp TTTGGGAGCTGGTGTGCCAGTCTGGTGAAGCACCCGGTGCTGCTCTaGAGAGTTGGGCACCAGCCAAGGTCAAGCTCCTCCAGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: FGSWCASLVKHPVLL*RVGHQPRSSSSSSG
Trigger: TCCACTACTGGAGGAGCTTGACCTTGGCTGGTGCCCAACTCTGCAGAGCAGCACCGGGTGCTTCACCAGACTGGCACACCAGCTCCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS GCA 90 bp TCTATTAGCTGTAAGAAAGAGTTTTTGCAAGTTTGGGAGCTGGTGTaGCAGTCTGGTGAAGCACCCGGTGCTGCTCTGCAGAGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: SISCKKEFLQVWELV*QSGEAPGAALQSWA
Trigger: TGCCCAACTCTGCAGAGCAGCACCGGGTGCTTCACCAGACTGGCACACCAGCTCCCAAACTTGCAAAAACTCTTTCTTACAGCTAATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 90 bp TCTGCATTGAGAGGGGAAGTCTGGCTGTTTGATTCTATAGCTCTATaGGTGTTCATCATTTCTCCTCTTGTAGCTGTCCTGGCTCGGCGC +
Preference number: 5 (lower is better)
Translates to: SALRGEVWLFDSIAL*VFIISPLVAVLARR
Trigger: GCGCCGAGCCAGGACAGCTACAAGAGGAGAAATGATGAACACCCATAGAGCTATAGAATCAAACAGCCAGACTTCCCCTCTCAATGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 90 bp GTCACACACAGATCTATTAGCTGTAAGAAAGAGTTTTTGCAAGTTTaGGAGCTGGTGTGCCAGTCTGGTGAAGCACCCGGTGCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: VTHRSISCKKEFLQV*ELVCQSGEAPGAAL
Trigger: CAGAGCAGCACCGGGTGCTTCACCAGACTGGCACACCAGCTCCCAAACTTGCAAAAACTCTTTCTTACAGCTAATAGATCTGTGTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCTGGACTACCTCTGCATaGAGAGGGGAAGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAWTTSA*RGEVWL
Trigger: CAGCCAGACTTCCCCTCTCAATGCAGAGGTAGTCCA...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS CCA 90 bp TTCCACATAGTCCTGGCTCTGAAAATTAGGTGGCGTCCTCTTGAATaGCAAGGAAGCACTAGGACACTGATCCCACCATGTCCCATAAGT +
Preference number: 5 (lower is better)
Translates to: FHIVLALKIRWRPLE*QGSTRTLIPPCPIS
Trigger: ACTTATGGGACATGGTGGGATCAGTGTCCTAGTGCTTCCTTGCCATTCAAGAGGACGCCACCTAATTTTCAGAGCCAGGACTATGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 90 bp ACAGATCTATTAGCTGTAAGAAAGAGTTTTTGCAAGTTTGGGAGCTaGTGTGCCAGTCTGGTGAAGCACCCGGTGCTGCTCTGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: TDLLAVRKSFCKFGS*CASLVKHPVLLCRV
Trigger: AACTCTGCAGAGCAGCACCGGGTGCTTCACCAGACTGGCACACCAGCTCCCAAACTTGCAAAAACTCTTTCTTACAGCTAATAGATCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCGCCTGGGTTTATATGTaGGCTCTGCCACTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAAWVYM*ALPLAA
Trigger: AGCTGCTAGTGGCAGAGCCAACATATAAACCCAGGC...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS GCA 90 bp ATGTCTGTGTCACACACAGATCTATTAGCTGTAAGAAAGAGTTTTTaGAAGTTTGGGAGCTGGTGTGCCAGTCTGGTGAAGCACCCGGTG +
Preference number: 5 (lower is better)
Translates to: MSVSHTDLLAVRKSF*KFGSWCASLVKHPV
Trigger: CACCGGGTGCTTCACCAGACTGGCACACCAGCTCCCAAACTTGCAAAAACTCTTTCTTACAGCTAATAGATCTGTGTGTGACACAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTGGACTACCTCTGCATaGAGAGGGGAAGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMWTTSA*RGEVWL
Trigger: CAGCCAGACTTCCCCTCTCAATGCAGAGGTAGTCCA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCCTTCAGCTGGTGGATTaGGGGAATAAGGATTTGCAG +
Preference number: 5 (lower is better)
Translates to: TGKDLEHTYCCAKGIILALQLVD*GNKDLQ
Trigger: CTGCAAATCCTTATTCCCCAAATCCACCAGCTGAAG...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACCAAAATACCCATTATTaGGCCCTTCCCCGAGGACAG +
Preference number: 5 (lower is better)
Translates to: NDPEWFSLALDESTDVTDQNTHY*ALPRGQ
Trigger: CTGTCCTCGGGGAAGGGCCAAATAATGGGTATTTTG...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAAGGCAGGAGACTCGCTaGAACCTGCAGGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGRQETR*NLQGGG
Trigger: ACCTCCACCCTGCAGGTTCAAGCGAGTCTCCTGCCT...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS TCA 90 bp ATTCCAGAGAAGTGTCATCTAGTTTTGCCCAGTATGGTTGCAGATTaGGGTGGATGTATTGCAGAGGATCACAGCAATGCTGGCTCAGTA +
Preference number: 5 (lower is better)
Translates to: IPEKCHLVLPSMVAD*GGCIAEDHSNAGSV
Trigger: TACTGAGCCAGCATTGCTGTGATCCTCTGCAATACATCCACCTCAATCTGCAACCATACTGGGCAAAACTAGATGACACTTCTCTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS TCA 90 bp GATCAAGAGGAAGACTGGAGACTCCTATCCAGCTTCAAAGCTTCTTaGAAATCCAAGCGAATGAAGCAAATGGAGAAGGCAAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: DQEEDWRLLSSFKAS*KSKRMKQMEKAREP
Trigger: TGGTTCCCTTGCCTTCTCCATTTGCTTCATTCGCTTGGATTTTCAAGAAGCTTTGAAGCTGGATAGGAGTCTCCAGTCTTCCTCTTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS GCA 90 bp TATGGTTGCAGATTGAGGTGGATGTATTGCAGAGGATCACAGCAATaGTGGCTCAGTAGTTTGCAAGTCTGTGCTAATCTACACAGGTCT +
Preference number: 5 (lower is better)
Translates to: YGCRLRWMYCRGSQQ*WLSSLQVCANLHRS
Trigger: AGACCTGTGTAGATTAGCACAGACTTGCAAACTACTGAGCCAGCATTGCTGTGATCCTCTGCAATACATCCACCTCAATCTGCAACCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS GCA 90 bp TCATCTAGTTTTGCCCAGTATGGTTGCAGATTGAGGTGGATGTATTaGAGAGGATCACAGCAATGCTGGCTCAGTAGTTTGCAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: SSSFAQYGCRLRWMY*RGSQQCWLSSLQVC
Trigger: ACAGACTTGCAAACTACTGAGCCAGCATTGCTGTGATCCTCTGCAATACATCCACCTCAATCTGCAACCATACTGGGCAAAACTAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 90 bp TTGTTCAAAAGTAAGTTCCACATAGTCCTGGCTCTGAAAATTAGGTaGCGTCCTCTTGAATGGCAAGGAAGCACTAGGACACTGATCCCA +
Preference number: 5 (lower is better)
Translates to: LFKSKFHIVLALKIR*RPLEWQGSTRTLIP
Trigger: TGGGATCAGTGTCCTAGTGCTTCCTTGCCATTCAAGAGGACGCCACCTAATTTTCAGAGCCAGGACTATGTGGAACTTACTTTTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCGCTATATTGCCCAGGTaGGAGTGCAGTGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: QNRYIPASTHPSKIYISLAILPR*ECSGCS
Trigger: TGAGCAGCCACTGCACTCCAACCTGGGCAATATAGC...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCTTACAGGCAAAGATCTaGAGCACACTTACTGCTGTG +
Preference number: 5 (lower is better)
Translates to: TGKDLEHTYCCAKGIILALQAKI*STLTAV
Trigger: CACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGTAA...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS TCA 90 bp ACAAGTCGTTTAAGGCTGCATAACTTGGCAATGTGGTTGAAAGCTTaGGGTGGTAGCTTATCACAGGAGGAGAGATTTAAGGCCTGTAGA +
Preference number: 5 (lower is better)
Translates to: TSRLRLHNLAMWLKA*GGSLSQEERFKACR
Trigger: TCTACAGGCCTTAAATCTCTCCTCCTGTGATAAGCTACCACCTCAAGCTTTCAACCACATTGCCAAGTTATGCAGCCTTAAACGACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS GCA 90 bp AATCTCCCATCTTACTTCAGCTGGTGGATTTGGGGAATAAGGATTTaGAGAACAAGCGAGAATTCTAATGACTGCTCCGGGATGATAGGT +
Preference number: 5 (lower is better)
Translates to: NLPSYFSWWIWGIRI*RTSENSNDCSGMIG
Trigger: ACCTATCATCCCGGAGCAGTCATTAGAATTCTCGCTTGTTCTGCAAATCCTTATTCCCCAAATCCACCAGCTGAAGTAAGATGGGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS GCA 90 bp TGTAGAAATTCCAGAGAAGTGTCATCTAGTTTTGCCCAGTATGGTTaGAGATTGAGGTGGATGTATTGCAGAGGATCACAGCAATGCTGG +
Preference number: 5 (lower is better)
Translates to: CRNSREVSSSFAQYG*RLRWMYCRGSQQCW
Trigger: CCAGCATTGCTGTGATCCTCTGCAATACATCCACCTCAATCTGCAACCATACTGGGCAAAACTAGATGACACTTCTCTGGAATTTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 90 bp GTGGGGAAATTTATCTGCTTAATACAAGGTTTAAACTGGCGAGCTTaGGAAGCATTCACCTTCGTAGGTCTCTCTGACCAAAGAATCTCC +
Preference number: 5 (lower is better)
Translates to: VGKFICLIQGLNWRA*EAFTFVGLSDQRIS
Trigger: GGAGATTCTTTGGTCAGAGAGACCTACGAAGGTGAATGCTTCCCAAGCTCGCCAGTTTAAACCTTGTATTAAGCAGATAAATTTCCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 90 bp ACAGAGATGAAGCCTCTATTGCCAGTCCAAGATAAATTAAGCCACTaGACAAGAGTGCAGCGAGACTGTAGAAATTCCAGAGAAGTGTCA +
Preference number: 5 (lower is better)
Translates to: TEMKPLLPVQDKLSH*TRVQRDCRNSREVS
Trigger: TGACACTTCTCTGGAATTTCTACAGTCTCGCTGCACTCTTGTCCAGTGGCTTAATTTATCTTGGACTGGCAATAGAGGCTTCATCTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCAACTTGGGAATACATTaGGTACACCAGCCAAATTCC +
Preference number: 5 (lower is better)
Translates to: TGKDLEHTYCCAKGIILANLGIH*VHQPNS
Trigger: GGAATTTGGCTGGTGTACCAAATGTATTCCCAAGTT...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTTAGGTGGCGTCCTCTaGAATGGCAAGGAAGCACTA +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMLGGVL*NGKEAL
Trigger: TAGTGCTTCCTTGCCATTCAAGAGGACGCCACCTAA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGAGAGAAAGCACTGGCTaGTCCTTCACACCATGTAGC +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMRESTG*SFTPCS
Trigger: GCTACATGGTGTGAAGGACAAGCCAGTGCTTTCTCT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCAAAATACCCATTATTaGGCCCTTCCCCGAGGACAG +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMQNTHY*ALPRGQ
Trigger: CTGTCCTCGGGGAAGGGCCAAATAATGGGTATTTTG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGAGAGTTTTTGCAAGTTaGGGAGCTGGTGTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMRVFAS*GAGVPV
Trigger: GACTGGCACACCAGCTCCCAAACTTGCAAAAACTCT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAGGTGCTGTCATCATTTaGCACTGCTACTTGGCACAC +
Preference number: 5 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPGAVII*HCYLAH
Trigger: GTGTGCCAAGTAGCAGTGCAAAATGATGACAGCACC...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS TCA 90 bp AATGCAAAAGTTGGCATTCATCCAGGTACCCTGAACTTTGCATGCTaGCTTCAGGTACAAATGCTGACATGTGACATTCTTTTACCCTGC +
Preference number: 5 (lower is better)
Translates to: NAKVGIHPGTLNFAC*LQVQMLTCDILLPC
Trigger: GCAGGGTAAAAGAATGTCACATGTCAGCATTTGTACCTGAAGTCAGCATGCAAAGTTCAGGGTACCTGGATGAATGCCAACTTTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229971.2
CDS CCA 90 bp CCGGACTTACCATTCTTGTTCCTAATATGTCCAGCTGCTGTAACCTaGTACAATTACATGCCAATTCATCAATGTCTGTGTCACACACAG +
Preference number: 5 (lower is better)
Translates to: PDLPFLFLICPAAVT*YNYMPIHQCLCHTQ
Trigger: CTGTGTGTGACACAGACATTGATGAATTGGCATGTAATTGTACCAGGTTACAGCAGCTGGACATATTAGGAACAAGAATGGTAAGTCCGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCTTCAGCTGGTGGATTaGGGGAATAAGGATTTGCAG +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMLQLVD*GNKDLQ
Trigger: CTGCAAATCCTTATTCCCCAAATCCACCAGCTGAAG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTTTAAACTGGCGAGCTaGGGAAGCATTCACCTTCGT +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMFKLAS*GSIHLR
Trigger: ACGAAGGTGAATGCTTCCCAAGCTCGCCAGTTTAAA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACTCAATAAGTGAAGTCTaGAGAGAAAGCACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: NDPEWFSLALDESTDVTDSISEV*RESTGL
Trigger: CAAGCCAGTGCTTTCTCTCAAGACTTCACTTATTGA...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCGCACTGCTAAACTTTTaGTTAAGACTGTCCATTCCA +
Preference number: 5 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAALLNF*LRLSIP
Trigger: TGGAATGGACAGTCTTAACAAAAAGTTTAGCAGTGC...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACTTAAGGCTGCATAACTaGGCAATGTGGTTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: NDPEWFSLALDESTDVTDLRLHN*AMWLKA
Trigger: AGCTTTCAACCACATTGCCAAGTTATGCAGCCTTAA...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCAAGGGACTTGCTATATaGCCCAGGTTGGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: QNRYIPASTHPSKIYISLKGLAI*PRLECS
Trigger: ACTGCACTCCAACCTGGGCAATATAGCAAGTCCCTT...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACGGTTTTCCTTGGCTCTaGATGAGTCAACAGATGTTA +
Preference number: 5 (lower is better)
Translates to: NDPEWFSLALDESTDVTDGFPWL*MSQQML
Trigger: TAACATCTGTTGACTCATCAAGAGCCAAGGAAAACC...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCACCTGAGTGGTTTTCCTaGGCTCTTGATGAGTCAACA +
Preference number: 5 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPPEWFS*ALDEST
Trigger: TGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGG...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS TCA 90 bp GAACTGTTAACATGGGAAAGACCGGTGACATCTAGATGTGAATTATaGAGCTTCAAAAGGTCAGGTGTCCTCAGTAAGATGCATGAACTC +
Preference number: 5 (lower is better)
Translates to: ELLTWERPVTSRCEL*SFKRSGVLSKMHEL
Trigger: GAGTTCATGCATCTTACTGAGGACACCTGACCTTTTGAAGCTTCATAATTCACATCTAGATGTCACCGGTCTTTCCCATGTTAACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACTGTAGGATACACCTGTaGTTCAAAAGTAAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: NDPEWFSLALDESTDVTDCRIHL*FKSKFH
Trigger: GTGGAACTTACTTTTGAACAACAGGTGTATCCTACA...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAAGAGAAAGCACTGGCTaGTCCTTCACACCATGTAGC +
Preference number: 5 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGRESTG*SFTPCS
Trigger: GCTACATGGTGTGAAGGACAAGCCAGTGCTTTCTCT...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTGCTGGCTCAGTAGTTaGCAAGTCTGTGCTAATCTA +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMCWLSS*QVCANL
Trigger: TAGATTAGCACAGACTTGCAAACTACTGAGCCAGCA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGATTGAGGTGGATGTATaGCAGAGGATCACAGCAATG +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMIEVDV*QRITAM
Trigger: CATTGCTGTGATCCTCTGCAATACATCCACCTCAAT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCAGTATGGTTGCAGATaGAGGTGGATGTATTGCAGA +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMQYGCR*RWMYCR
Trigger: TCTGCAATACATCCACCTCAATCTGCAACCATACTG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTTTTGCCCAGTATGGTaGCAGATTGAGGTGGATGTA +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMFCPVW*QIEVDV
Trigger: TACATCCACCTCAATCTGCAACCATACTGGGCAAAA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGCTGAGCAGTGCTGTTaGCTCTACTTTTGTTCGATA +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMAEQCC*LYFCSI
Trigger: TATCGAACAAAAGTAGAGCAAACAGCACTGCTCAGC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAGCTGAGCAGTGCTGTTaGCTCTACTTTTGTTCGATA +
Preference number: 5 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPAEQCC*LYFCSI
Trigger: TATCGAACAAAAGTAGAGCAAACAGCACTGCTCAGC...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCCGGACTTACCATTCTaGTTCCTAATATGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMPDLPF*FLICPA
Trigger: AGCTGGACATATTAGGAACAAGAATGGTAAGTCCGG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCCTAGCTCTGACCATTTaGTACATACCAAACAAAACA +
Preference number: 5 (lower is better)
Translates to: TGKDLEHTYCCAKGIILALALTI*YIPNKT
Trigger: TGTTTTGTTTGGTATGTACAAAATGGTCAGAGCTAG...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp ACAGGCAAAGATCTTGAGCACACTTACTGCTGTGCCAAAGGAATAATCTTGGCCGTGACTACTGAACACTaGACATACATCGTTTTGTTA +
Preference number: 5 (lower is better)
Translates to: TGKDLEHTYCCAKGIILAVTTEH*TYIVLL
Trigger: TAACAAAACGATGTATGTCAAGTGTTCAGTAGTCAC...GGCCAAGATTATTCCTTTGGCACAGCAGTAAGTGTGCTCAAGATCTTTGCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp AATGACCCTGAGTGGTTTTCCTTGGCTCTTGATGAGTCAACAGATGTTACTGACATTAGAATGGCAGAGTaGAACAAATGCAAAGGAGAC +
Preference number: 5 (lower is better)
Translates to: NDPEWFSLALDESTDVTDIRMAE*NKCKGD
Trigger: GTCTCCTTTGCATTTGTTCAACTCTGCCATTCTAAT...GTCAGTAACATCTGTTGACTCATCAAGAGCCAAGGAAAACCACTCAGGGTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCAGCCAAAGGAATAATCTaGGCCCCATCCCTACTTATA +
Preference number: 5 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPAKGII*APSLLI
Trigger: TATAAGTAGGGATGGGGCCAAGATTATTCCTTTGGC...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS TCA 90 bp AATGCAAAAGTTGGCATTCATCCAGGTACCCTGAACTTTGCATGCTaGCTTCAGGTACAAATGCTGACATGTGACATTCTTTTACCTGAA +
Preference number: 5 (lower is better)
Translates to: NAKVGIHPGTLNFAC*LQVQMLTCDILLPE
Trigger: TTCAGGTAAAAGAATGTCACATGTCAGCATTTGTACCTGAAGTCAGCATGCAAAGTTCAGGGTACCTGGATGAATGCCAACTTTTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS CCA 90 bp ATAAGATTTGTGGGGAAATTTATCTGCTTAATACAAGGTTTAAACTaGCGAGCTTGGGAAGCATTCACCTTCGTAGGTCTCTCTGACCAA +
Preference number: 5 (lower is better)
Translates to: IRFVGKFICLIQGLN*RAWEAFTFVGLSDQ
Trigger: TTGGTCAGAGAGACCTACGAAGGTGAATGCTTCCCAAGCTCGCCAGTTTAAACCTTGTATTAAGCAGATAAATTTCCCCACAAATCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGAACTTGGGAATACATTaGGTACACCAGCCAAATTCC +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMNLGIH*VHQPNS
Trigger: GGAATTTGGCTGGTGTACCAAATGTATTCCCAAGTT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTTGGGGAATAAGGATTaGCAGAACAAGCGAGAATTC +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMLGNKD*QNKREF
Trigger: GAATTCTCGCTTGTTCTGCAAATCCTTATTCCCCAA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGATTTAAACTGGCGAGCTaGGGAAGCATTCACCTTCGT +
Preference number: 5 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGFKLAS*GSIHLR
Trigger: ACGAAGGTGAATGCTTCCCAAGCTCGCCAGTTTAAA...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTCAATAAGTGAAGTCTaGAGAGAAAGCACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMSISEV*RESTGL
Trigger: CAAGCCAGTGCTTTCTCTCAAGACTTCACTTATTGA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCTGCTGGCTCAGTAGTTaGCAAGTCTGTGCTAATCTA +
Preference number: 5 (lower is better)
Translates to: QNRYIPASTHPSKIYISLCWLSS*QVCANL
Trigger: TAGATTAGCACAGACTTGCAAACTACTGAGCCAGCA...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCATTGAGGTGGATGTATaGCAGAGGATCACAGCAATG +
Preference number: 5 (lower is better)
Translates to: QNRYIPASTHPSKIYISLIEVDV*QRITAM
Trigger: CATTGCTGTGATCCTCTGCAATACATCCACCTCAAT...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGAAGTGTCATCTAGTTTaGCCCAGTATGGTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMKCHLV*PSMVAD
Trigger: ATCTGCAACCATACTGGGCAAAACTAGATGACACTT...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTTAAGGCTGCATAACTaGGCAATGTGGTTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMLRLHN*AMWLKA
Trigger: AGCTTTCAACCACATTGCCAAGTTATGCAGCCTTAA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTGTAAGAAAGAGTTTTaGCAAGTTTGGGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMCKKEF*QVWELV
Trigger: CACCAGCTCCCAAACTTGCAAAAACTCTTTCTTACA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 90 bp AAACACAGCTGTCTGAGTAAAGTCACCAGAACTTGGGAATACATTTaGTACACCAGCCAAATTCCACATAGTATAGGACATACTATTCTC +
Preference number: 5 (lower is better)
Translates to: KHSCLSKVTRTWEYI*YTSQIPHSIGHTIL
Trigger: GAGAATAGTATGTCCTATACTATGTGGAATTTGGCTGGTGTACCAAATGTATTCCCAAGTTCTGGTGACTTTACTCAGACAGCTGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTGTAGGATACACCTGTaGTTCAAAAGTAAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMCRIHL*FKSKFH
Trigger: GTGGAACTTACTTTTGAACAACAGGTGTATCCTACA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGCACTGCTAAACTTTTaGTTAAGACTGTCCATTCCA +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMALLNF*LRLSIP
Trigger: TGGAATGGACAGTCTTAACAAAAAGTTTAGCAGTGC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGCAGTATGGTTGCAGATaGAGGTGGATGTATTGCAGA +
Preference number: 5 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLQYGCR*RWMYCR
Trigger: TCTGCAATACATCCACCTCAATCTGCAACCATACTG...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCAAGTGTCATCTAGTTTaGCCCAGTATGGTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: QNRYIPASTHPSKIYISLKCHLV*PSMVAD
Trigger: ATCTGCAACCATACTGGGCAAAACTAGATGACACTT...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGGAGATGAAGCCTCTATaGCCAGTCCAAGATAAATTA +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMEMKPL*PVQDKL
Trigger: TAATTTATCTTGGACTGGCAATAGAGGCTTCATCTC...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCTGTTTGCTCTACTTTaGTTCGATAGAGAACAAGTC +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMLFALL*FDREQV
Trigger: GACTTGTTCTCTATCGAACAAAAGTAGAGCAAACAG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCACTGTTTGCTCTACTTTaGTTCGATAGAGAACAAGTC +
Preference number: 5 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPLFALL*FDREQV
Trigger: GACTTGTTCTCTATCGAACAAAAGTAGAGCAAACAG...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGACCGGACTTACCATTCTaGTTCCTAATATGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGPDLPF*FLICPA
Trigger: AGCTGGACATATTAGGAACAAGAATGGTAAGTCCGG...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CATGGATTAACTGACTCGAAAATACTCTGGAATAGGGGTCACAAATTTGGTCCATGCCACGATACTTTATaGCTCAGTGTTCCTTTGAAA +
Preference number: 5 (lower is better)
Translates to: HGLTDSKILWNRGHKFGPCHDTL*LSVPLK
Trigger: TTTCAAAGGAACACTGAGCAATAAAGTATCGTGGCA...TGGACCAAATTTGTGACCCCTATTCCAGAGTATTTTCGAGTCAGTTAATCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CAAAATCGTTATATTCCAGCATCCACACACCCTAGCAAGATATATATCTCTCTCCTGCCTAGTCTTCAATaGGAAGTGATTAAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: QNRYIPASTHPSKIYISLLPSLQ*EVIKLQ
Trigger: TTGCAGCTTAATCACTTCCAATTGAAGACTAGGCAG...GAGAGAGATATATATCTTGCTAGGGTGTGTGGATGCTGGAATATAACGATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGTGGTTGCTTAAAGAATaGAGAACACTGGGAACAACA +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMWLLKE*RTLGTT
Trigger: TGTTGTTCCCAGTGTTCTCAATTCTTTAAGCAACCA...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGATAGGGGTCACAAATTaGGTCCACAAGCCAAATCCA +
Preference number: 5 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLIGVTN*VHKPNP
Trigger: TGGATTTGGCTTGTGGACCAAATTTGTGACCCCTAT...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGAGGTGGGAAAATTATTaGAGCCCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLRWENY*SPGVQD
Trigger: GTCTTGAACTCCTGGGCTCAAATAATTTTCCCACCT...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGATGTAAGAAAGAGTTTTaGCAAGTTTGGGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGCKKEF*QVWELV
Trigger: CACCAGCTCCCAAACTTGCAAAAACTCTTTCTTACA...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp CATACCAAACAAAACACTTGCCAGGTCACAGGCTTAATAAGACATCCTTACATGCTAGCTCTGACCATTTaGTACATACCAAACAAAACA +
Preference number: 5 (lower is better)
Translates to: HTKQNTCQVTGLIRHPYMLALTI*YIPNKT
Trigger: TGTTTTGTTTGGTATGTACAAAATGGTCAGAGCTAG...CATGTAAGGATGTCTTATTAAGCCTGTGACCTGGCAAGTGTTTTGTTTGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS GCA 90 bp TTTGGAAAGCTTGCATTCAGTTCTAGCACAGCTCTGTTATCAATCTaGGAACAGAAGGACACATCAAGTAAAGAAAGATCTTTACAAGAT +
Preference number: 5 (lower is better)
Translates to: FGKLAFSSSTALLSI*EQKDTSSKERSLQD
Trigger: ATCTTGTAAAGATCTTTCTTTACTTGATGTGTCCTTCTGTTCGCAGATTGATAACAGAGCTGTGCTAGAACTGAATGCAAGCTTTCCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS-3UTR CAA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGAGAGATGAAGCCTCTATaGCCAGTCCAAGATAAATTA +
Preference number: 5 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGEMKPL*PVQDKL
Trigger: TAATTTATCTTGGACTGGCAATAGAGGCTTCATCTC...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp ACTGTCTATGATTGCTTTCACATTAGAATGGCAGAGTTGAACAAATGCAAAGGACAGCTTCAAAGCTTCTaGAAAATCCAAGCGAATGAA +
Preference number: 5 (lower is better)
Translates to: TVYDCFHIRMAELNKCKGQLQSF*KIQANE
Trigger: TTCATTCGCTTGGATTTTCAAGAAGCTTTGAAGCTG...TCCTTTGCATTTGTTCAACTCTGCCATTCTAATGTGAAAGCAATCATAGACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS-3UTR CAA 90 bp GATGAATATGCTGATTTGCCCAACCACATTGGCATAATAGTGTTAGTTCTATTGGCTCATGAAATTTTATaGGAACATGGCCACACTCAT +
Preference number: 5 (lower is better)
Translates to: DEYADLPNHIGIIVLVLLAHEIL*EHGHTH
Trigger: ATGAGTGTGGCCATGTTCCAATAAAATTTCATGAGC...CAATAGAACTAACACTATTATGCCAATGTGGTTGGGCAAATCAGCATATTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS CCA 72 bp CGGGCTTCACCAGCGACCAGGCAGCGCGAGAAGGCCTaGGTGCGGGGGCGGCTCCCCGACTCTCTAGATGCG +
Preference number: 6 (lower is better)
Translates to: RASPATRQREKA*VRGRLPDSLDA
Trigger: CGCATCTAGAGAGTCGGGGAGCCGCCCCCGCACCCAGGCCTTCTCGCGCTGCCTGGTCGCTGGTGAAGCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS GCA 72 bp TGGTGTGCCAGTCTGGTGAAGCACCCGGTGCTGCTCTaGAGAGTTGGGCACCAGCCAAGGTCAAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: WCASLVKHPVLL*RVGHQPRSSSS
Trigger: GGAGGAGCTTGACCTTGGCTGGTGCCCAACTCTGCAGAGCAGCACCGGGTGCTTCACCAGACTGGCACACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS GCA 72 bp TGTAAGAAAGAGTTTTTGCAAGTTTGGGAGCTGGTGTaGCAGTCTGGTGAAGCACCCGGTGCTGCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: CKKEFLQVWELV*QSGEAPGAALQ
Trigger: CTGCAGAGCAGCACCGGGTGCTTCACCAGACTGGCACACCAGCTCCCAAACTTGCAAAAACTCTTTCTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 72 bp GTCCTGGCTCTGAAAATTAGGTGGCGTCCTCTTGAATaGCAAGGAAGCACTAGGACACTGATCCCACCATGT +
Preference number: 6 (lower is better)
Translates to: VLALKIRWRPLE*QGSTRTLIPPC
Trigger: ACATGGTGGGATCAGTGTCCTAGTGCTTCCTTGCCATTCAAGAGGACGCCACCTAATTTTCAGAGCCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 72 bp TTAGCTGTAAGAAAGAGTTTTTGCAAGTTTGGGAGCTaGTGTGCCAGTCTGGTGAAGCACCCGGTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: LAVRKSFCKFGS*CASLVKHPVLL
Trigger: GAGCAGCACCGGGTGCTTCACCAGACTGGCACACCAGCTCCCAAACTTGCAAAAACTCTTTCTTACAGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CAA 90 bp AATGTCTGTGTCACACACAGATCTATTAGCTGTAAGAAAGAGTTTTaGCAAGTTTGGGAGCTGGTGTGCCAGTCTGGTGAAGCACCCGGT +
Preference number: 6 (lower is better)
Translates to: NVCVTHRSISCKKEF*QVWELVCQSGEAPG
Trigger: ACCGGGTGCTTCACCAGACTGGCACACCAGCTCCCAAACTTGCAAAAACTCTTTCTTACAGCTAATAGATCTGTGTGTGACACAGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CAA 90 bp GGATCAAGAGGAAGACTGGAGACTCCTATCCAGCTTCAAAGCTTCTaGAAAATCCAAGCGAATGAAGCAAATGGAGAAGGCAAGGGAACC +
Preference number: 6 (lower is better)
Translates to: GSRGRLETPIQLQSF*KIQANEANGEGKGT
Trigger: GGTTCCCTTGCCTTCTCCATTTGCTTCATTCGCTTGGATTTTCAAGAAGCTTTGAAGCTGGATAGGAGTCTCCAGTCTTCCTCTTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS TCA 72 bp TATCCAGCTTCAAAGCTTCTTGAAAATCCAAGCGAATaGAGCAAATGGAGAAGGCAAGGGAACCAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: YPASKLLENPSE*SKWRRQGNQAR
Trigger: CCTGGCCTGGTTCCCTTGCCTTCTCCATTTGCTTCATTCGCTTGGATTTTCAAGAAGCTTTGAAGCTGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369244.7
CDS CCA 72 bp AGTAAGTTCCACATAGTCCTGGCTCTGAAAATTAGGTaGCGTCCTCTTGAATGGCAAGGAAGCACTAGGACA +
Preference number: 6 (lower is better)
Translates to: SKFHIVLALKIR*RPLEWQGSTRT
Trigger: TGTCCTAGTGCTTCCTTGCCATTCAAGAGGACGCCACCTAATTTTCAGAGCCAGGACTATGTGGAACTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CAA 90 bp ACCTTCAGAAACCTGCTAAATCCTGCAACAGAGATGAAGCCTCTATaGCCAGTCCAAGATAAATTAAGCCACTGGACAAGAGTGCAGCGA +
Preference number: 6 (lower is better)
Translates to: TFRNLLNPATEMKPL*PVQDKLSHWTRVQR
Trigger: TCGCTGCACTCTTGTCCAGTGGCTTAATTTATCTTGGACTGGCAATAGAGGCTTCATCTCTGTTGCAGGATTTAGCAGGTTTCTGAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS GCA 72 bp TCTTACTTCAGCTGGTGGATTTGGGGAATAAGGATTTaGAGAACAAGCGAGAATTCTAATGACTGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: SYFSWWIWGIRI*RTSENSNDCSG
Trigger: CCCGGAGCAGTCATTAGAATTCTCGCTTGTTCTGCAAATCCTTATTCCCCAAATCCACCAGCTGAAGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS GCA 72 bp TCCAGAGAAGTGTCATCTAGTTTTGCCCAGTATGGTTaGAGATTGAGGTGGATGTATTGCAGAGGATCACAG +
Preference number: 6 (lower is better)
Translates to: SREVSSSFAQYG*RLRWMYCRGSQ
Trigger: CTGTGATCCTCTGCAATACATCCACCTCAATCTGCAACCATACTGGGCAAAACTAGATGACACTTCTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 72 bp GAATGGTCACAGGATACACATGGGAAATGCAAAAGTTaGCATTCATCCAGGTACCCTGAACTTTGCATGCTG +
Preference number: 6 (lower is better)
Translates to: EWSQDTHGKCKS*HSSRYPELCML
Trigger: CAGCATGCAAAGTTCAGGGTACCTGGATGAATGCCAACTTTTGCATTTCCCATGTGTATCCTGTGACCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 72 bp AGAGGGGAAGTCTGGCTGTTTGATTCTATAGCTCTATaGGTGTTCATCATTTCTCCTCTTGTAGCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: RGEVWLFDSIAL*VFIISPLVAVL
Trigger: CAGGACAGCTACAAGAGGAGAAATGATGAACACCCATAGAGCTATAGAATCAAACAGCCAGACTTCCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS TCA 72 bp GTTGGCATTCATCCAGGTACCCTGAACTTTGCATGCTaGCTTCAGGTACAAATGCTGACATGTGACATTCTT +
Preference number: 6 (lower is better)
Translates to: VGIHPGTLNFAC*LQVQMLTCDIL
Trigger: AAGAATGTCACATGTCAGCATTTGTACCTGAAGTCAGCATGCAAAGTTCAGGGTACCTGGATGAATGCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS TCA 72 bp AAGTGTCATCTAGTTTTGCCCAGTATGGTTGCAGATTaGGGTGGATGTATTGCAGAGGATCACAGCAATGCT +
Preference number: 6 (lower is better)
Translates to: KCHLVLPSMVAD*GGCIAEDHSNA
Trigger: AGCATTGCTGTGATCCTCTGCAATACATCCACCTCAATCTGCAACCATACTGGGCAAAACTAGATGACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS GCA 72 bp AGATTGAGGTGGATGTATTGCAGAGGATCACAGCAATaGTGGCTCAGTAGTTTGCAAGTCTGTGCTAATCTA +
Preference number: 6 (lower is better)
Translates to: RLRWMYCRGSQQ*WLSSLQVCANL
Trigger: TAGATTAGCACAGACTTGCAAACTACTGAGCCAGCATTGCTGTGATCCTCTGCAATACATCCACCTCAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS GCA 72 bp TCACACACAGATCTATTAGCTGTAAGAAAGAGTTTTTaGAAGTTTGGGAGCTGGTGTGCCAGTCTGGTGAAG +
Preference number: 6 (lower is better)
Translates to: SHTDLLAVRKSF*KFGSWCASLVK
Trigger: CTTCACCAGACTGGCACACCAGCTCCCAAACTTGCAAAAACTCTTTCTTACAGCTAATAGATCTGTGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 72 bp GTGGGGAAATTTATCTGCTTAATACAAGGTTTAAACTaGCGAGCTTGGGAAGCATTCACCTTCGTAGGTCTC +
Preference number: 6 (lower is better)
Translates to: VGKFICLIQGLN*RAWEAFTFVGL
Trigger: GAGACCTACGAAGGTGAATGCTTCCCAAGCTCGCCAGTTTAAACCTTGTATTAAGCAGATAAATTTCCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 72 bp AAGCCTCTATTGCCAGTCCAAGATAAATTAAGCCACTaGACAAGAGTGCAGCGAGACTGTAGAAATTCCAGA +
Preference number: 6 (lower is better)
Translates to: KPLLPVQDKLSH*TRVQRDCRNSR
Trigger: TCTGGAATTTCTACAGTCTCGCTGCACTCTTGTCCAGTGGCTTAATTTATCTTGGACTGGCAATAGAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CAA 72 bp GTCACACACAGATCTATTAGCTGTAAGAAAGAGTTTTaGCAAGTTTGGGAGCTGGTGTGCCAGTCTGGTGAA +
Preference number: 6 (lower is better)
Translates to: VTHRSISCKKEF*QVWELVCQSGE
Trigger: TTCACCAGACTGGCACACCAGCTCCCAAACTTGCAAAAACTCTTTCTTACAGCTAATAGATCTGTGTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS TCA 72 bp ACATGGGAAAGACCGGTGACATCTAGATGTGAATTATaGAGCTTCAAAAGGTCAGGTGTCCTCAGTAAGATG +
Preference number: 6 (lower is better)
Translates to: TWERPVTSRCEL*SFKRSGVLSKM
Trigger: CATCTTACTGAGGACACCTGACCTTTTGAAGCTTCATAATTCACATCTAGATGTCACCGGTCTTTCCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS TCA 72 bp TTAAGGCTGCATAACTTGGCAATGTGGTTGAAAGCTTaGGGTGGTAGCTTATCACAGGAGGAGAGATTTAAG +
Preference number: 6 (lower is better)
Translates to: LRLHNLAMWLKA*GGSLSQEERFK
Trigger: CTTAAATCTCTCCTCCTGTGATAAGCTACCACCTCAAGCTTTCAACCACATTGCCAAGTTATGCAGCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS TCA 72 bp TCTTCAATCATGACACAACTGCCTAAACTGAGGTGCTaGAGCTCTGAACAGAAGTTCAAAATGCTGAGCAGT +
Preference number: 6 (lower is better)
Translates to: SSIMTQLPKLRC*SSEQKFKMLSS
Trigger: ACTGCTCAGCATTTTGAACTTCTGTTCAGAGCTTCAGCACCTCAGTTTAGGCAGTTGTGTCATGATTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 72 bp CCAAAGAATCTCCCATCTTACTTCAGCTGGTGGATTTaGGGAATAAGGATTTGCAGAACAAGCGAGAATTCT +
Preference number: 6 (lower is better)
Translates to: PKNLPSYFSWWI*GIRICRTSENS
Trigger: AGAATTCTCGCTTGTTCTGCAAATCCTTATTCCCCAAATCCACCAGCTGAAGTAAGATGGGAGATTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CAA 72 bp ACCAAAGAATCTCCCATCTTACTTCAGCTGGTGGATTaGGGGAATAAGGATTTGCAGAACAAGCGAGAATTC +
Preference number: 6 (lower is better)
Translates to: TKESPILLQLVD*GNKDLQNKREF
Trigger: GAATTCTCGCTTGTTCTGCAAATCCTTATTCCCCAAATCCACCAGCTGAAGTAAGATGGGAGATTCTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CAA 72 bp AACCTGCTAAATCCTGCAACAGAGATGAAGCCTCTATaGCCAGTCCAAGATAAATTAAGCCACTGGACAAGA +
Preference number: 6 (lower is better)
Translates to: NLLNPATEMKPL*PVQDKLSHWTR
Trigger: TCTTGTCCAGTGGCTTAATTTATCTTGGACTGGCAATAGAGGCTTCATCTCTGTTGCAGGATTTAGCAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS GCA 72 bp CTTGCATTCAGTTCTAGCACAGCTCTGTTATCAATCTaGGAACAGAAGGACACATCAAGTAAAGAAAGATCT +
Preference number: 6 (lower is better)
Translates to: LAFSSSTALLSI*EQKDTSSKERS
Trigger: AGATCTTTCTTTACTTGATGTGTCCTTCTGTTCGCAGATTGATAACAGAGCTGTGCTAGAACTGAATGCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 72 bp TGTCTGAGTAAAGTCACCAGAACTTGGGAATACATTTaGTACACCAGCCAAATTCCACATAGTATAGGACAT +
Preference number: 6 (lower is better)
Translates to: CLSKVTRTWEYI*YTSQIPHSIGH
Trigger: ATGTCCTATACTATGTGGAATTTGGCTGGTGTACCAAATGTATTCCCAAGTTCTGGTGACTTTACTCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CCA 72 bp CCATTCTTGTTCCTAATATGTCCAGCTGCTGTAACCTaGTACAATTACATGCCAATTCATCAATGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: PFLFLICPAAVT*YNYMPIHQCLC
Trigger: ACACAGACATTGATGAATTGGCATGTAATTGTACCAGGTTACAGCAGCTGGACATATTAGGAACAAGAATGG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS TCA 72 bp ATAGGCATCATCTTCTATATCATTCATGTCAATAAGTaGAGTCTTGAGAGAAAGCACTGGCTTGTCCTTCAC +
Preference number: 6 (lower is better)
Translates to: IGIIFYIIHVNK*SLERKHWLVLH
Trigger: GTGAAGGACAAGCCAGTGCTTTCTCTCAAGACTTCACTTATTGACATGAATGATATAGAAGATGATGCCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7
CDS CAA 72 bp TCATCTTCTATATCATTCATGTCAATAAGTGAAGTCTaGAGAGAAAGCACTGGCTTGTCCTTCACACCATGT +
Preference number: 6 (lower is better)
Translates to: SSSISFMSISEV*RESTGLSFTPC
Trigger: ACATGGTGTGAAGGACAAGCCAGTGCTTTCTCTCAAGACTTCACTTATTGACATGAATGATATAGAAGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229971.2
ENST00000369244.7