Pregenerated sensors for FBXL3 (Homo sapiens)
Ensembl gene IDs: ENSG00000005812Ensembl transcript IDs: ENST00000355619.10, ENST00000417323.1, ENST00000470210.1, ENST00000472949.1, ENST00000477982.2, ENST00000485797.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTTCCTCAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTACAAGTGGAATTTTCTaGCCAAAACTCATTCATGGG | + |
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Preference number: 2 (lower is better) Translates to: LPQPLRHNLKVTPLKRAATSGIF*PKLIHG Trigger: CCCATGAATGAGTTTTGGTCAGAAAATTCCACTTGT...AGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTGAGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| 3UTR-3UTR GCA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACATTCGGAGATATGACTaGTATTACACTAAGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNIRRYD*YYTKET Trigger: TGTTTCCTTAGTGTAATAGCAGTCATATCTCCGAAT...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| 3UTR GCA 72 bp | GGAGAACTAGTAAAGCATTCCTTACTTTACATACAGTaGCTCAAGTGCCACATACATAATAACATATCACAA | + |
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Preference number: 3 (lower is better) Translates to: GELVKHSLLYIQ*LKCHIHNNISQ Trigger: TTGTGATATGTTATTATGTATGTGGCACTTGAGGCACTGTATGTAAAGTAAGGAATGCTTTACTAGTTCTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CCA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACCCGCATCCGAGGCGCTaGTCCCGCGGAGGGCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNPHPRR*SRGGRQ Trigger: TTGGCGCCCTCCGCGGGACCAGCGCCTCGGATGCGG...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR GCA 90 bp | CAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTTTAAGAACGCGGCTCCACCTTTaGGGCTCTGGCTGCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: QPLRHNLKVTPLKRAALRTRLHL*GSGCPE Trigger: TTCTGGGCAGCCAGAGCCGCAAAGGTGGAGCCGCGT...TCTTAAAGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | CTTCCTCAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTGTTGCGGCAAACTTGTaGAGCATGAGCCCGGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: LPQPLRHNLKVTPLKRAAVAANL*SMSPVK Trigger: CTTGACCGGGCTCATGCTTCACAAGTTTGCCGCAAC...AGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTGAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR GCA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACCTCGTTTCATCCTGCTaGCGGGGGCGGCTTCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNLVSSC*RGRLPP Trigger: TGGGGGAAGCCGCCCCCGGCAGCAGGATGAAACGAG...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR GCA 90 bp | TTGATCTTGGCTCTGTATTATCCTTCTATAATACCACTGTGTGACATCTATCAGACCTCAGCGAGCGGCTaGCACCGCGTAAGCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LILALYYPSIIPLCDIYQTSASG*HRVSFL Trigger: CAGGAAGCTTACGCGGTGGCAGCCGCTCGCTGAGGT...CTGATAGATGTCACACAGTGGTATTATAGAAGGATAATACAGAGCCAAGATCAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | CAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTTTAAGAACAAGCTGCTTCAGCTaGTTCCTTGCTGCTGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: QPLRHNLKVTPLKRAALRTSCFS*FLAAVH Trigger: GTGGACAGCAGCAAGGAATCAGCTGAAGCAGCTTGT...TCTTAAAGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR GCA 90 bp | CAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTTTAAGACTTTGCGGCTCTGGCTaGCCAGAAAGAAGCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QPLRHNLKVTPLKRAALRLCGSG*PERSFP Trigger: AGGAAAGCTTCTTTCTGGGCAGCCAGAGCCGCAAAG...TCTTAAAGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR GCA 90 bp | CTTCCTCAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTGGCCAAGCACATCTTTaGTTACTGATCTCCCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: LPQPLRHNLKVTPLKRAAGQAHL*LLISQS Trigger: ACTTTGGGAGATCAGTAAGCAAAGATGTGCTTGGCC...AGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTGAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CCA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACCCACCTTTGCGGCTCTaGCTGCCCAGAAAGAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNPPLRL*LPRKKL Trigger: AAGCTTCTTTCTGGGCAGCCAGAGCCGCAAAGGTGG...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACCAAACTTGTGAAGCATaGGCCCGGTCAAGAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNQTCEA*ARSRRG Trigger: GCCTCTTCTTGACCGGGCTCATGCTTCACAAGTTTG...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | CTTCCTCAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTGCTTGGTCGAGCAGTTaGAATAAGTCCAAGTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: LPQPLRHNLKVTPLKRAAAWSSS*NKSKCF Trigger: AAAACACTTGGACTTATTTCAACTGCTCGACCAAGC...AGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTGAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | CTTCCTCAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTCACATCTTTGCTTACTaGTCTCCCAAAGTACAGATG | + |
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Preference number: 4 (lower is better) Translates to: LPQPLRHNLKVTPLKRAAHIFAY*SPKVQM Trigger: CATCTGTACTTTGGGAGATCAGTAAGCAAAGATGTG...AGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTGAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | CAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTTTAAGATCCATAATGGATAATTaGGATAGGCGGCCACCACAC | + |
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Preference number: 4 (lower is better) Translates to: QPLRHNLKVTPLKRAALRSIMDN*DRRPPH Trigger: GTGTGGTGGCCGCCTATCTCAATTATCCATTATGGA...TCTTAAAGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CCA 90 bp | CAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTTTAAGAACAAAGGATACCTGCTaGAGAGACATGAGGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: QPLRHNLKVTPLKRAALRTKDTC*RDMRTA Trigger: AGCTGTCCTCATGTCTCTCCAGCAGGTATCCTTTGT...TCTTAAAGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | CAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTTTAAGATCCCAGCTACTCTTCTaGATAGTATGGAAGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: QPLRHNLKVTPLKRAALRSQLLF*IVWKCV Trigger: GACACACTTCCATACTATTCAGAAGAGTAGCTGGGA...TCTTAAAGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | CAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTTTAAGATGGAGAATAATGTCCTaGAGGAGATTACCCCAATCA | + |
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Preference number: 4 (lower is better) Translates to: QPLRHNLKVTPLKRAALRWRIMS*RRLPQS Trigger: TGATTGGGGTAATCTCCTTCAGGACATTATTCTCCA...TCTTAAAGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | CTTCCTCAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTGGAAAAACAACAACTTaGCTAGCACAGGTAATTCTT | + |
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Preference number: 4 (lower is better) Translates to: LPQPLRHNLKVTPLKRAAGKTTT*LAQVIL Trigger: AAGAATTACCTGTGCTAGTCAAGTTGTTGTTTTTCC...AGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTGAGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CCA 90 bp | CAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTTTAAGACAAAGTACAGATGGGTaGCAGGTATTTCATAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPLRHNLKVTPLKRAALRQSTDG*QVFHSE Trigger: TTCGCTATGAAATACCTGCCACCCATCTGTACTTTG...TCTTAAAGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CCA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACCCCTACCAAGATGCTTaGACACTTCCCAGTGAATCT | + |
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Preference number: 4 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNPYQDA*TLPSES Trigger: AGATTCACTGGGAAGTGTCCAAGCATCTTGGTAGGG...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | TTGATCTTGGCTCTGTATTATCCTTCTATAATACCACTGTGTGACATCTATCAGCACAAGTCAGGCATGTaGAATACCTGGTTCCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: LILALYYPSIIPLCDIYQHKSGM*NTWFQL Trigger: CAACTGGAACCAGGTATTTCACATGCCTGACTTGTG...CTGATAGATGTCACACAGTGGTATTATAGAAGGATAATACAGAGCCAAGATCAA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACTTGGACACTTCCCAGTaGATCTGCTCCAAACTATAC | + |
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Preference number: 4 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNLDTSQ*ICSKLY Trigger: GTATAGTTTGGAGCAGATTCACTGGGAAGTGTCCAA...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR GCA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACATACCTGGTTCCAGTTaGGGCAAACTTGTGAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNIPGSS*GKLVKH Trigger: ATGCTTCACAAGTTTGCCGCAACTGGAACCAGGTAT...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR GCA 90 bp | TTGATCTTGGCTCTGTATTATCCTTCTATAATACCACTGTGTGACATCTATCAGCACACAAAGGATACCTaGTGGAGAGACATGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: LILALYYPSIIPLCDIYQHTKDT*WRDMRT Trigger: TGTCCTCATGTCTCTCCAGCAGGTATCCTTTGTGTG...CTGATAGATGTCACACAGTGGTATTATAGAAGGATAATACAGAGCCAAGATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CCA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACGCGAAGACAGGGATTTaGAGTTTACGAACACAACTG | + |
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Preference number: 4 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNAKTGI*SLRTQL Trigger: CAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGC...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CCA 90 bp | CTTCCTCAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTAGATGGATCATCTACTaGAGTATCATCTATCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: LPQPLRHNLKVTPLKRAARWIIY*SIIYLK Trigger: CTTAAGATAGATGATACTCCAGTAGATGATCCATCT...AGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTGAGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CCA 90 bp | TTGATCTTGGCTCTGTATTATCCTTCTATAATACCACTGTGTGACATCTATCAGGCAGTTTTTACCAAGTaGGCATCATGTCGGGAAACC | + |
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Preference number: 4 (lower is better) Translates to: LILALYYPSIIPLCDIYQAVFTK*ASCRET Trigger: GGTTTCCCGACATGATGCCCACTTGGTAAAAACTGC...CTGATAGATGTCACACAGTGGTATTATAGAAGGATAATACAGAGCCAAGATCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | TTGATCTTGGCTCTGTATTATCCTTCTATAATACCACTGTGTGACATCTATCAGCCCCAATCACAAGTCTaGGAATGCTCATTTGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: LILALYYPSIIPLCDIYQPQSQV*ECSFVV Trigger: GACTACAAATGAGCATTCTCAGACTTGTGATTGGGG...CTGATAGATGTCACACAGTGGTATTATAGAAGGATAATACAGAGCCAAGATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | CAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTTTAAGAAGTGCAGAGATAAAGTaGGACTTTGGTAAATCCATA | + |
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Preference number: 4 (lower is better) Translates to: QPLRHNLKVTPLKRAALRSAEIK*DFGKSI Trigger: TATGGATTTACCAAAGTCTCACTTTATCTCTGCACT...TCTTAAAGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | TTGATCTTGGCTCTGTATTATCCTTCTATAATACCACTGTGTGACATCTATCAGTGGCCACTAGTACTTTaGGAGATGGATCATCTACTG | + |
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Preference number: 4 (lower is better) Translates to: LILALYYPSIIPLCDIYQWPLVL*EMDHLL Trigger: CAGTAGATGATCCATCTCTCAAAGTACTAGTGGCCA...CTGATAGATGTCACACAGTGGTATTATAGAAGGATAATACAGAGCCAAGATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | TTGATCTTGGCTCTGTATTATCCTTCTATAATACCACTGTGTGACATCTATCAGGTCCAGGATTCTCACTaGCTACATCAATGCGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: LILALYYPSIIPLCDIYQVQDSH*LHQCAN Trigger: ATTTGCGCATTGATGTAGTCAGTGAGAATCCTGGAC...CTGATAGATGTCACACAGTGGTATTATAGAAGGATAATACAGAGCCAAGATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR GCA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACAGGTGCTATTCATCATaGAGTTTTTACCAAGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNRCYSS*SFYQVG Trigger: GCCCACTTGGTAAAAACTGCATGATGAATAGCACCT...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACACAAGTGGAATTTTCTaGCCAAAACTCATTCATGGG | + |
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Preference number: 4 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNTSGIF*PKLIHG Trigger: CCCATGAATGAGTTTTGGTCAGAAAATTCCACTTGT...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR TCA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACTCATTTTCAACAGCTTaGGTGTATCACTATTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNSFSTA*VYHYCW Trigger: CCAACAATAGTGATACACTCAAGCTGTTGAAAATGA...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR GCA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACTGCAACGTTCTGCAATaGGAATTAACTCTTCATCAA | + |
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Preference number: 4 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNCNVLQ*ELTLHQ Trigger: TTGATGAAGAGTTAATTCGCATTGCAGAACGTTGCA...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR GCA 90 bp | TTGATCTTGGCTCTGTATTATCCTTCTATAATACCACTGTGTGACATCTATCAGGAGCAATTCACAAGTTaGGATAGTATATCACAAGCT | + |
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Preference number: 4 (lower is better) Translates to: LILALYYPSIIPLCDIYQEQFTS*DSISQA Trigger: AGCTTGTGATATACTATCGCAACTTGTGAATTGCTC...CTGATAGATGTCACACAGTGGTATTATAGAAGGATAATACAGAGCCAAGATCAA 37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR GCA 90 bp | TTGATCTTGGCTCTGTATTATCCTTCTATAATACCACTGTGTGACATCTATCAGTTTCTTCTCATATGTTaGTGTAGGAGAGCATATCAT | + |
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Preference number: 4 (lower is better) Translates to: LILALYYPSIIPLCDIYQFLLIC*CRRAYH Trigger: ATGATATGCTCTCCTACAGCAACATATGAGAAGAAA...CTGATAGATGTCACACAGTGGTATTATAGAAGGATAATACAGAGCCAAGATCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS GCA 90 bp | TCCGAGGCGCTGGTCCCGCGGAGGGCGCCAACGCGGCTCCACCTTTaGGGCTCTGGCTGCCCAGAAAGAAGCTTTCCTTCTCAGTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: SEALVPRRAPTRLHL*GSGCPERSFPSQSR Trigger: GCGGGACTGAGAAGGAAAGCTTCTTTCTGGGCAGCCAGAGCCGCAAAGGTGGAGCCGCGTTGGCGCCCTCCGCGGGACCAGCGCCTCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000355619.10 ENST00000417323.1 ENST00000472949.1 |
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| CDS GCA 90 bp | GTTCAGGGATCCCCGGCGCCGCGAGAGACTACCTCAGCGAGCGGCTaGCACCGCGTAAGCTTCCTGCACCTGGGCCACAAACAGCGAGTC | + |
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Preference number: 5 (lower is better) Translates to: VQGSPAPRETTSASG*HRVSFLHLGHKQRV Trigger: GACTCGCTGTTTGTGGCCCAGGTGCAGGAAGCTTACGCGGTGGCAGCCGCTCGCTGAGGTAGTCTCTCGCGGCGCCGGGGATCCCTGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000355619.10 ENST00000417323.1 |
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| CDS CCA 90 bp | GCTGGTCCCGCGGAGGGCGCCAACGCGGCTCCACCTTTGCGGCTCTaGCTGCCCAGAAAGAAGCTTTCCTTCTCAGTCCCGCGCTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: AGPAEGANAAPPLRL*LPRKKLSFSVPRCL Trigger: CAGACAGCGCGGGACTGAGAAGGAAAGCTTCTTTCTGGGCAGCCAGAGCCGCAAAGGTGGAGCCGCGTTGGCGCCCTCCGCGGGACCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000355619.10 ENST00000417323.1 ENST00000472949.1 |
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| CDS GCA 90 bp | GTCCCGCGGAGGGCGCCAACGCGGCTCCACCTTTGCGGCTCTGGCTaGCCAGAAAGAAGCTTTCCTTCTCAGTCCCGCGCTGTCTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: VPRRAPTRLHLCGSG*PERSFPSQSRAVCV Trigger: AACACAGACAGCGCGGGACTGAGAAGGAAAGCTTCTTTCTGGGCAGCCAGAGCCGCAAAGGTGGAGCCGCGTTGGCGCCCTCCGCGGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000355619.10 ENST00000417323.1 ENST00000472949.1 |
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| CDS TCA 90 bp | AGTCGGGGACAGAGCCCGCACACCTGGGAGGTCGATTCCAGCCTTTaGCAGAGAAGACACAGCCTCCGGCGGTCAGAGATAGCTGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: SRGQSPHTWEVDSSL*QRRHSLRRSEIAAG Trigger: TCCAGCAGCTATCTCTGACCGCCGGAGGCTGTGTCTTCTCTGTCAAAGGCTGGAATCGACCTCCCAGGTGTGCGGGCTCTGTCCCCGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS CCA 90 bp | TCGCTCTGGTTTGAACCTGATCAGAACCTGATCCGAAGTCCTTATTaGGACTTCCCAGTTTTGCCCTCAAAAGTCGCGCATCCCGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: SLWFEPDQNLIRSPY*DFPVLPSKVAHPGN Trigger: ATTCCCGGGATGCGCGACTTTTGAGGGCAAAACTGGGAAGTCCCAATAAGGACTTCGGATCAGGTTCTGATCAGGTTCAAACCAGAGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS CCA 90 bp | TTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGCAGTaGAAGAGGTTGCACTTCTCCGAGAGAGGACAGGTTTCTGTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFPVVLPLPTKLSAQ*KRLHFSERGQVSVK Trigger: CTTAACAGAAACCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477982.2 |
||
| CDS TCA 90 bp | TTTACTGGGCGACCAACTCGCTCTGGTTTGAACCTGATCAGAACCTaGTCCGAAGTCCTTATTGGGACTTCCCAGTTTTGCCCTCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTGRPTRSGLNLIRT*SEVLIGTSQFCPQK Trigger: CTTTTGAGGGCAAAACTGGGAAGTCCCAATAAGGACTTCGGATCAGGTTCTGATCAGGTTCAAACCAGAGCGAGTTGGTCGCCCAGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485797.2 |
||
| CDS CCA 90 bp | ACCAAGTGGGCATCATGTCGGGAAACCACACCCTACCAAGATGCTTaGACACTTCCCAGTGAATCTGCTCCAAACTATACTTTTGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TKWASCRETTPYQDA*TLPSESAPNYTFGQ Trigger: CTGACCAAAAGTATAGTTTGGAGCAGATTCACTGGGAAGTGTCCAAGCATCTTGGTAGGGTGTGGTTTCCCGACATGATGCCCACTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS CCA 90 bp | TACCGCGGAACATTTGGTACAATTTACTGGGCGACCAACTCGCTCTaGTTTGAACCTGATCAGAACCTGATCCGAAGTCCTTATTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: YRGTFGTIYWATNSL*FEPDQNLIRSPYWD Trigger: GTCCCAATAAGGACTTCGGATCAGGTTCTGATCAGGTTCAAACCAGAGCGAGTTGGTCGCCCAGTAAATTGTACCAAATGTTCCGCGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS-3UTR CAA 90 bp | TTGATCTTGGCTCTGTATTATCCTTCTATAATACCACTGTGTGACATCTATCAGAACGCGGCTCCACCTTaGCGGCTCTGGCTGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LILALYYPSIIPLCDIYQNAAPP*RLWLPR Trigger: TCTGGGCAGCCAGAGCCGCAAAGGTGGAGCCGCGTT...CTGATAGATGTCACACAGTGGTATTATAGAAGGATAATACAGAGCCAAGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS TCA 90 bp | TCTAGGGCATGTCATTCCCACACGGCCAAGCACATCTTTGCTTACTaGTCTCCCAAAGTACAGATGGGTGGCAGGTATTTCATAGCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SRACHSHTAKHIFAY*SPKVQMGGRYFIAK Trigger: TTTCGCTATGAAATACCTGCCACCCATCTGTACTTTGGGAGATCAGTAAGCAAAGATGTGCTTGGCCGTGTGGGAATGACATGCCCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS GCA 90 bp | AGAGCAGTGGCTCCTCAGGCAGCCATTCATACTTTATGTGTAGCATaGTTTGCAACAGTGAAGCTCCACATTTCCCACACCTCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAVAPQAAIHTLCVA*FATVKLHISHTSIF Trigger: GAAAATGGAGGTGTGGGAAATGTGGAGCTTCACTGTTGCAAAGCATGCTACACATAAAGTATGAATGGCTGCCTGAGGAGCCACTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477982.2 |
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| CDS CCA 90 bp | GGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTaGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSSNRGMQEHGCRHV*VNRHLLTSSLFPVV Trigger: AACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477982.2 |
||
| CDS CCA 90 bp | TGCACTGTCGTTAGTTATTACCGCGGAACATTTGGTACAATTTACTaGGCGACCAACTCGCTCTGGTTTGAACCTGATCAGAACCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: CTVVSYYRGTFGTIY*ATNSLWFEPDQNLI Trigger: GATCAGGTTCTGATCAGGTTCAAACCAGAGCGAGTTGGTCGCCCAGTAAATTGTACCAAATGTTCCGCGGTAATAACTAACGACAGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS-3UTR CAA 90 bp | CTTCCTCAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTAATACCTGGTTCCAGTaGCGGCAAACTTGTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPQPLRHNLKVTPLKRAANTWFQ*RQTCEA Trigger: TGCTTCACAAGTTTGCCGCAACTGGAACCAGGTATT...AGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTGAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS CCA 90 bp | GGCCAAGCACATCTTTGCTTACTGATCTCCCAAAGTACAGATGGGTaGCAGGTATTTCATAGCGAAAGAAGGGGTCAAATTCTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GQAHLCLLISQSTDG*QVFHSERRGQILLH Trigger: ATGAAGAAGAATTTGACCCCTTCTTTCGCTATGAAATACCTGCCACCCATCTGTACTTTGGGAGATCAGTAAGCAAAGATGTGCTTGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355619.10 |
||
| CDS-3UTR CAA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACGCTTCAGCTGATTCCTaGCTGCTGTCCACCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNASADS*LLSTLK Trigger: CTTCAAGGTGGACAGCAGCAAGGAATCAGCTGAAGC...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CAA 90 bp | CAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTTTAAGATTGCTGCTGTCCACCTaGAAGCTGACATATTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: QPLRHNLKVTPLKRAALRLLLST*KLTYCR Trigger: TCTACAATATGTCAGCTTCAAGGTGGACAGCAGCAA...TCTTAAAGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CAA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACCGGCCAAGCACATCTTaGCTTACTGATCTCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNRPSTS*LTDLPK Trigger: CTTTGGGAGATCAGTAAGCAAAGATGTGCTTGGCCG...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
||
| CDS-3UTR CAA 90 bp | CAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTTTAAGAGTGGCCGTAATCCATTaGCACACACTACTAGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QPLRHNLKVTPLKRAALRVAVIH*HTLLVQ Trigger: TTGAACTAGTAGTGTGTGCAAATGGATTACGGCCAC...TCTTAAAGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CAA 90 bp | CTTCCTCAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTATAGCTGACAAATTTTaGCAACGTTCTGCAATGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LPQPLRHNLKVTPLKRAAIADKF*QRSAMR Trigger: TCGCATTGCAGAACGTTGCAAAAATTTGTCAGCTAT...AGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTGAGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CAA 90 bp | CTTCCTCAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTAGGAAAAACAACAACTaGACTAGCACAGGTAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPQPLRHNLKVTPLKRAARKNNN*TSTGNS Trigger: AGAATTACCTGTGCTAGTCAAGTTGTTGTTTTTCCT...AGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTGAGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000355619.10 |
||
| CDS-3UTR CAA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACAGCGAAGACAGGGATTaGGAGTTTACGAACACAACT | + |
|
Preference number: 5 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNSEDRD*EFTNTT Trigger: AGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCT...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CAA 90 bp | CAACCACTGAGACACAATCTAAAAGTCACACCACTGAAAAGAGCCGCTTTAAGAAGTGTATCACTATTGTaGGCCACTAGTACTTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QPLRHNLKVTPLKRAALRSVSLL*ATSTLR Trigger: TCTCAAAGTACTAGTGGCCAACAATAGTGATACACT...TCTTAAAGCGGCTCTTTTCAGTGGTGTGACTTTTAGATTGTGTCTCAGTGGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS TCA 90 bp | CTATACTTTTGGTCAGGAATTAGTACTTCTTCCATAATGGATAATTaGGATAGGCGGCCACCACACATCTTCACAAACTCAACAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LYFWSGISTSSIMDN*DRRPPHIFTNSTKA Trigger: TGCCTTTGTTGAGTTTGTGAAGATGTGTGGTGGCCGCCTATCTCAATTATCCATTATGGAAGAAGTACTAATTCCTGACCAAAAGTATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS TCA 90 bp | GCCTTGAAGAATGGAATAAAATTGGCTGAGCTTGGATTCCTGTTGTaGAATGCAGGTGTGGAAATTCAAAACCATTGTTTACTCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ALKNGIKLAELGFLL*NAGVEIQNHCLLRH Trigger: ATGCCTGAGTAAACAATGGTTTTGAATTTCCACACCTGCATTTCACAACAGGAATCCAAGCTCAGCCAATTTTATTCCATTCTTCAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477982.2 |
||
| CDS-3UTR CAA 90 bp | TTGATCTTGGCTCTGTATTATCCTTCTATAATACCACTGTGTGACATCTATCAGTTGGCCACTAGTACTTaGAGAGATGGATCATCTACT | + |
|
Preference number: 5 (lower is better) Translates to: LILALYYPSIIPLCDIYQLATST*RDGSST Trigger: AGTAGATGATCCATCTCTCAAAGTACTAGTGGCCAA...CTGATAGATGTCACACAGTGGTATTATAGAAGGATAATACAGAGCCAAGATCAA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS CCA 90 bp | CCAACTATACAAGAATATTTCTTTACAGTGGAGAACCTACTTATCTaGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: PTIQEYFFTVENLLI*EMKHLFLGQQETRL Trigger: GAGTCTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATAAGTAGGTTCTCCACTGTAAAGAAATATTCTTGTATAGTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477982.2 |
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| CDS-3UTR CAA 90 bp | TTGATCTTGGCTCTGTATTATCCTTCTATAATACCACTGTGTGACATCTATCAGTTGAGTGTATCACTATaGTTGGCCACTAGTACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LILALYYPSIIPLCDIYQLSVSL*LATSTL Trigger: CAAAGTACTAGTGGCCAACAATAGTGATACACTCAA...CTGATAGATGTCACACAGTGGTATTATAGAAGGATAATACAGAGCCAAGATCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CAA 90 bp | CTTAAGAAGGCCATCCGTTTTAAAAGTAGATCTAAGACTGTTAGCTTCCTCAACCTCATTTTCAACAGCTaGAGTGTATCACTATTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKKAIRFKSRSKTVSFLNLIFNS*SVSLLL Trigger: CAACAATAGTGATACACTCAAGCTGTTGAAAATGAG...GTTGAGGAAGCTAACAGTCTTAGATCTACTTTTAAAACGGATGGCCTTCTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS-3UTR CAA 90 bp | TTGATCTTGGCTCTGTATTATCCTTCTATAATACCACTGTGTGACATCTATCAGCTTTTAATAATCTGTTaGATCAGCTCTGGATGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LILALYYPSIIPLCDIYQLLIIC*ISSGWV Trigger: TACCCATCCAGAGCTGATCAAACAGATTATTAAAAG...CTGATAGATGTCACACAGTGGTATTATAGAAGGATAATACAGAGCCAAGATCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS GCA 72 bp | TCCCCGGCGCCGCGAGAGACTACCTCAGCGAGCGGCTaGCACCGCGTAAGCTTCCTGCACCTGGGCCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: SPAPRETTSASG*HRVSFLHLGHK Trigger: TTTGTGGCCCAGGTGCAGGAAGCTTACGCGGTGGCAGCCGCTCGCTGAGGTAGTCTCTCGCGGCGCCGGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000355619.10 ENST00000417323.1 |
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| CDS CAA 90 bp | ATCCGAGGCGCTGGTCCCGCGGAGGGCGCCAACGCGGCTCCACCTTaGCGGCTCTGGCTGCCCAGAAAGAAGCTTTCCTTCTCAGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: IRGAGPAEGANAAPP*RLWLPRKKLSFSVP Trigger: CGGGACTGAGAAGGAAAGCTTCTTTCTGGGCAGCCAGAGCCGCAAAGGTGGAGCCGCGTTGGCGCCCTCCGCGGGACCAGCGCCTCGGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000355619.10 ENST00000417323.1 ENST00000472949.1 |
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| CDS CCA 72 bp | GCGGAGGGCGCCAACGCGGCTCCACCTTTGCGGCTCTaGCTGCCCAGAAAGAAGCTTTCCTTCTCAGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: AEGANAAPPLRL*LPRKKLSFSVP Trigger: CGGGACTGAGAAGGAAAGCTTCTTTCTGGGCAGCCAGAGCCGCAAAGGTGGAGCCGCGTTGGCGCCCTCCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000355619.10 ENST00000417323.1 ENST00000472949.1 |
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| CDS CAA 90 bp | AAGTCGGGGACAGAGCCCGCACACCTGGGAGGTCGATTCCAGCCTTaGACAGAGAAGACACAGCCTCCGGCGGTCAGAGATAGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KSGTEPAHLGGRFQP*TEKTQPPAVRDSCW Trigger: CCAGCAGCTATCTCTGACCGCCGGAGGCTGTGTCTTCTCTGTCAAAGGCTGGAATCGACCTCCCAGGTGTGCGGGCTCTGTCCCCGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS CAA 90 bp | TCCCGGGAATCCCCGTCTCCTGCAGTCCTGGTTAGACCGGGAAGATaGTCACCGCTTTTGTCCAGTCTTCAGCCTGGAGGTAGGACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SRESPSPAVLVRPGR*SPLLSSLQPGGRTP Trigger: CGGCGTCCTACCTCCAGGCTGAAGACTGGACAAAAGCGGTGACAATCTTCCCGGTCTAACCAGGACTGCAGGAGACGGGGATTCCCGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS TCA 72 bp | CAGAGCCCGCACACCTGGGAGGTCGATTCCAGCCTTTaGCAGAGAAGACACAGCCTCCGGCGGTCAGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: QSPHTWEVDSSL*QRRHSLRRSEI Trigger: TATCTCTGACCGCCGGAGGCTGTGTCTTCTCTGTCAAAGGCTGGAATCGACCTCCCAGGTGTGCGGGCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS CAA 72 bp | ACAGAGCCCGCACACCTGGGAGGTCGATTCCAGCCTTaGACAGAGAAGACACAGCCTCCGGCGGTCAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: TEPAHLGGRFQP*TEKTQPPAVRD Trigger: ATCTCTGACCGCCGGAGGCTGTGTCTTCTCTGTCAAAGGCTGGAATCGACCTCCCAGGTGTGCGGGCTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS CAA 72 bp | TCCCCGTCTCCTGCAGTCCTGGTTAGACCGGGAAGATaGTCACCGCTTTTGTCCAGTCTTCAGCCTGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPSPAVLVRPGR*SPLLSSLQPGG Trigger: ACCTCCAGGCTGAAGACTGGACAAAAGCGGTGACAATCTTCCCGGTCTAACCAGGACTGCAGGAGACGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS CAA 90 bp | CCTGATCAGAACCTGATCCGAAGTCCTTATTGGGACTTCCCAGTTTaGCCCTCAAAAGTCGCGCATCCCGGGAATCCCCGTCTCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PDQNLIRSPYWDFPV*PSKVAHPGNPRLLQ Trigger: CTGCAGGAGACGGGGATTCCCGGGATGCGCGACTTTTGAGGGCAAAACTGGGAAGTCCCAATAAGGACTTCGGATCAGGTTCTGATCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS CAA 72 bp | AACCTGATCCGAAGTCCTTATTGGGACTTCCCAGTTTaGCCCTCAAAAGTCGCGCATCCCGGGAATCCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: NLIRSPYWDFPV*PSKVAHPGNPR Trigger: ACGGGGATTCCCGGGATGCGCGACTTTTGAGGGCAAAACTGGGAAGTCCCAATAAGGACTTCGGATCAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS GCA 72 bp | AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTaGAGACACGTTTGGGTAAACAGGCACCTTCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: SGSSNRGMQEHG*RHVWVNRHLLT Trigger: AGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477982.2 |
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| CDS CAA 72 bp | CCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTaGCACTTCTCCGAGAGAGGACAGGTTTCTGTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLPTKLSAQWKR*HFSERGQVSVK Trigger: CTTAACAGAAACCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477982.2 |
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| CDS CAA 90 bp | GGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATaGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GCRHVWVNRHLLTSS*FPVVLPLPTKLSAQ Trigger: CTGCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477982.2 |
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| CDS TCA 72 bp | GCTGCTGTCCACCTGGTTCCAGTTGCGGCAAACTTGTaGAGCATGAGCCCGGTCAAGAAGAGGCAAATATTT | + |
|
Preference number: 6 (lower is better) Translates to: AAVHLVPVAANL*SMSPVKKRQIF Trigger: AAATATTTGCCTCTTCTTGACCGGGCTCATGCTTCACAAGTTTGCCGCAACTGGAACCAGGTGGACAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417323.1 |
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| CDS GCA 72 bp | CTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTaGACTTCTCCGAGAGAGGACAGGTTTCTGTTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LFPQSCQRSGRG*TSPREDRFLLR Trigger: TCTTAACAGAAACCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477982.2 |
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| CDS CAA 72 bp | CTAGGGCATGTCATTCCCACACGGCCAAGCACATCTTaGCTTACTGATCTCCCAAAGTACAGATGGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LGHVIPTRPSTS*LTDLPKYRWVA Trigger: TGCCACCCATCTGTACTTTGGGAGATCAGTAAGCAAAGATGTGCTTGGCCGTGTGGGAATGACATGCCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
||
| CDS TCA 72 bp | CGACCAACTCGCTCTGGTTTGAACCTGATCAGAACCTaGTCCGAAGTCCTTATTGGGACTTCCCAGTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RPTRSGLNLIRT*SEVLIGTSQFC Trigger: GCAAAACTGGGAAGTCCCAATAAGGACTTCGGATCAGGTTCTGATCAGGTTCAAACCAGAGCGAGTTGGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485797.2 |
||
| CDS CAA 90 bp | TCAACCAGTCTAGGGCATGTCATTCCCACACGGCCAAGCACATCTTaGCTTACTGATCTCCCAAAGTACAGATGGGTGGCAGGTATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: STSLGHVIPTRPSTS*LTDLPKYRWVAGIS Trigger: TGAAATACCTGCCACCCATCTGTACTTTGGGAGATCAGTAAGCAAAGATGTGCTTGGCCGTGTGGGAATGACATGCCCTAGACTGGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
||
| CDS TCA 72 bp | TGTCATTCCCACACGGCCAAGCACATCTTTGCTTACTaGTCTCCCAAAGTACAGATGGGTGGCAGGTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: CHSHTAKHIFAY*SPKVQMGGRYF Trigger: GAAATACCTGCCACCCATCTGTACTTTGGGAGATCAGTAAGCAAAGATGTGCTTGGCCGTGTGGGAATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
||
| CDS GCA 72 bp | GCTCCTCAGGCAGCCATTCATACTTTATGTGTAGCATaGTTTGCAACAGTGAAGCTCCACATTTCCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: APQAAIHTLCVA*FATVKLHISHT Trigger: GGTGTGGGAAATGTGGAGCTTCACTGTTGCAAAGCATGCTACACATAAAGTATGAATGGCTGCCTGAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477982.2 |
||
| CDS CCA 72 bp | GCATCATGTCGGGAAACCACACCCTACCAAGATGCTTaGACACTTCCCAGTGAATCTGCTCCAAACTATACT | + |
|
Preference number: 6 (lower is better) Translates to: ASCRETTPYQDA*TLPSESAPNYT Trigger: AGTATAGTTTGGAGCAGATTCACTGGGAAGTGTCCAAGCATCTTGGTAGGGTGTGGTTTCCCGACATGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
||
| CDS CCA 72 bp | AACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTaGGTAAACAGGCACCTTCTGACTTCTTCATTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: NRGMQEHGCRHV*VNRHLLTSSLF Trigger: AAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477982.2 |
||
| CDS CCA 72 bp | TTTGAACCTGATCAGAACCTGATCCGAAGTCCTTATTaGGACTTCCCAGTTTTGCCCTCAAAAGTCGCGCAT | + |
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Preference number: 6 (lower is better) Translates to: FEPDQNLIRSPY*DFPVLPSKVAH Trigger: ATGCGCGACTTTTGAGGGCAAAACTGGGAAGTCCCAATAAGGACTTCGGATCAGGTTCTGATCAGGTTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS CCA 72 bp | ACATTTGGTACAATTTACTGGGCGACCAACTCGCTCTaGTTTGAACCTGATCAGAACCTGATCCGAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: TFGTIYWATNSL*FEPDQNLIRSP Trigger: AGGACTTCGGATCAGGTTCTGATCAGGTTCAAACCAGAGCGAGTTGGTCGCCCAGTAAATTGTACCAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS CAA 72 bp | CACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATaGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: HVWVNRHLLTSS*FPVVLPLPTKL Trigger: CAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477982.2 |
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| CDS TCA 72 bp | CATGTGAAATACCTGGTTCCAGTTGCGGCAAACTTGTaGAGCATGAGCCCGGTCAAGAAGAGGCAAATATTT | + |
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Preference number: 6 (lower is better) Translates to: HVKYLVPVAANL*SMSPVKKRQIF Trigger: AAATATTTGCCTCTTCTTGACCGGGCTCATGCTTCACAAGTTTGCCGCAACTGGAACCAGGTATTTCACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS CCA 72 bp | GTTAGTTATTACCGCGGAACATTTGGTACAATTTACTaGGCGACCAACTCGCTCTGGTTTGAACCTGATCAG | + |
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Preference number: 6 (lower is better) Translates to: VSYYRGTFGTIY*ATNSLWFEPDQ Trigger: CTGATCAGGTTCAAACCAGAGCGAGTTGGTCGCCCAGTAAATTGTACCAAATGTTCCGCGGTAATAACTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS CAA 72 bp | TATCATGCACTGTCGTTAGTTATTACCGCGGAACATTaGGTACAATTTACTGGGCGACCAACTCGCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: YHALSLVITAEH*VQFTGRPTRSG Trigger: ACCAGAGCGAGTTGGTCGCCCAGTAAATTGTACCAAATGTTCCGCGGTAATAACTAACGACAGTGCATGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS CAA 90 bp | CTACATGAGACTTCACATTCCCCTAGTCCAATAGCTGACAAATTTTaGCAACGTTCTGCAATGCGAATTAACTCTTCATCAAGTGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: LHETSHSPSPIADKF*QRSAMRINSSSSGR Trigger: ACGGCCACTTGATGAAGAGTTAATTCGCATTGCAGAACGTTGCAAAAATTTGTCAGCTATTGGACTAGGGGAATGTGAAGTCTCATGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS TCA 72 bp | AGTTCAAATTCAAAACATCTCCACAAGTCAGGCATGTaGAATACCTGGTTCCAGTTGCGGCAAACTTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: SSNSKHLHKSGM*NTWFQLRQTCE Trigger: TTCACAAGTTTGCCGCAACTGGAACCAGGTATTTCACATGCCTGACTTGTGGAGATGTTTTGAATTTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS TCA 72 bp | TGGTCAGGAATTAGTACTTCTTCCATAATGGATAATTaGGATAGGCGGCCACCACACATCTTCACAAACTCA | + |
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Preference number: 6 (lower is better) Translates to: WSGISTSSIMDN*DRRPPHIFTNS Trigger: TGAGTTTGTGAAGATGTGTGGTGGCCGCCTATCTCAATTATCCATTATGGAAGAAGTACTAATTCCTGACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS CAA 90 bp | ATTTATTTATATCATGCACTGTCGTTAGTTATTACCGCGGAACATTaGGTACAATTTACTGGGCGACCAACTCGCTCTGGTTTGAACCTG | + |
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Preference number: 6 (lower is better) Translates to: IYLYHALSLVITAEH*VQFTGRPTRSGLNL Trigger: CAGGTTCAAACCAGAGCGAGTTGGTCGCCCAGTAAATTGTACCAAATGTTCCGCGGTAATAACTAACGACAGTGCATGATATAAATAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485797.2 |
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| CDS CAA 90 bp | ATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCGTACTATATaGGCCAAAGTGAGCGAGTTAGGTGATCTTGGTTTCAATTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: ISGLFSCKEAEIRTI*AKVSELGDLGFNFR Trigger: TCGGAAATTGAAACCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477982.2 |
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| CDS CAA 72 bp | CTGCTCATTTTCAACAGCTTGAGTGTATCACTATTGTaGGCCACTAGTACTTTGAGAGATGGATCATCTACT | + |
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Preference number: 6 (lower is better) Translates to: LLIFNSLSVSLL*ATSTLRDGSST Trigger: AGTAGATGATCCATCTCTCAAAGTACTAGTGGCCAACAATAGTGATACACTCAAGCTGTTGAAAATGAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000355619.10 ENST00000417323.1 ENST00000470210.1 ENST00000477982.2 ENST00000485797.2 |
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| CDS CAA 72 bp | CTCTTCTCTTGTAAAGAAGCTGAAATTCGTACTATATaGGCCAAAGTGAGCGAGTTAGGTGATCTTGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LFSCKEAEIRTI*AKVSELGDLGF Trigger: GAAACCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTTTACAAGAGAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477982.2 |
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| CDS CAA 72 bp | ACTTCACATTCCCCTAGTCCAATAGCTGACAAATTTTaGCAACGTTCTGCAATGCGAATTAACTCTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: TSHSPSPIADKF*QRSAMRINSSS Trigger: TGATGAAGAGTTAATTCGCATTGCAGAACGTTGCAAAAATTTGTCAGCTATTGGACTAGGGGAATGTGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355619.10 |
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| CDS CAA 90 bp | ATTTTCAACAGCTTGAGTGTATCACTATTGTTGGCCACTAGTACTTaGAGAGATGGATCATCTACTGGAGTATCATCTATCTTAAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: IFNSLSVSLLLATST*RDGSSTGVSSILSE Trigger: TTCGCTTAAGATAGATGATACTCCAGTAGATGATCCATCTCTCAAAGTACTAGTGGCCAACAATAGTGATACACTCAAGCTGTTGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000355619.10 ENST00000417323.1 ENST00000470210.1 ENST00000477982.2 ENST00000485797.2 |
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| CDS CCA 72 bp | GTGATCTTGGTTTCAATTTCCGAGCCTTTGTTAATATaGAGAATTATGGTTCATATCAGTTATGTAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: VILVSISEPLLI*RIMVHISYVGP Trigger: AGGTCCTACATAACTGATATGAACCATAATTCTCCATATTAACAAAGGCTCGGAAATTGAAACCAAGATCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477982.2 |
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| CDS CCA 72 bp | ATATTTCTGGCTGAGATTTTGGAACTAGCTAGTAACTaGCTTGTGTTCTTTAAGCATACTAACATCACTAAA | + |
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Preference number: 6 (lower is better) Translates to: IFLAEILELASN*LVFFKHTNITK Trigger: TTTAGTGATGTTAGTATGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAGCCAGAAATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477982.2 |
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