RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXL22 (Homo sapiens)

Ensembl gene IDs: ENSG00000197361

Ensembl transcript IDs: ENST00000360587.2, ENST00000534939.2, ENST00000560325.1, ENST00000638704.2

Found 360 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGCGCGCGCCCGTCCGCCGCCACGGCAGCCAACGTGCGGTTGGTaGCGCGCGCGCAGTTCTCCAGGCGCAGTGCGCGCAGGCGTGGGC +
Preference number: 1 (lower is better)
Translates to: AARARPPPRQPTCGW*RARSSPGAVRAGVG
Trigger: GCCCACGCCTGCGCGCACTGCGCCTGGAGAACTGCGCGCGCGTCACCAACCGCACGTTGGCTGCCGTGGCGGCGGACGGGCGCGCGCTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 90 bp AGGCGGCGCAGGCCGGCCGCGCTCACGTTGCGGCAGAAGTCCACGTaGAATGTCTGCAGCGCGCGCCCGTCCGCCGCCACGGCAGCCAAC +
Preference number: 1 (lower is better)
Translates to: RRRRPAALTLRQKST*NVCSARPSAATAAN
Trigger: GTTGGCTGCCGTGGCGGCGGACGGGCGCGCGCTGCAGACATTGCACGTGGACTTCTGCCGCAACGTGAGCGCGGCCGGCCTGCGCCGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 90 bp AGCCAACGTGCGGTTGGTGACGCGCGCGCAGTTCTCCAGGCGCAGTaGGCGCAGGCGTGGGCAGCAGCGCAGCAGGCGCGCCAGGCAGTC +
Preference number: 1 (lower is better)
Translates to: SQRAVGDARAVLQAQ*AQAWAAAQQARQAV
Trigger: GACTGCCTGGCGCGCCTGCTGCGCTGCTGCCCACGCCTGCGCGCACTGCGCCTGGAGAACTGCGCGCGCGTCACCAACCGCACGTTGGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 90 bp AGGCCGGCCGCGCTCACGTTGCGGCAGAAGTCCACGTGCAATGTCTaGAGCGCGCGCCCGTCCGCCGCCACGGCAGCCAACGTGCGGTTG +
Preference number: 1 (lower is better)
Translates to: RPAALTLRQKSTCNV*SARPSAATAANVRL
Trigger: CAACCGCACGTTGGCTGCCGTGGCGGCGGACGGGCGCGCGCTGCAGACATTGCACGTGGACTTCTGCCGCAACGTGAGCGCGGCCGGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CCA 90 bp GTTGGTGACGCGCGCGCAGTTCTCCAGGCGCAGTGCGCGCAGGCGTaGGCAGCAGCGCAGCAGGCGCGCCAGGCAGTCGTCGGTAACGTG +
Preference number: 1 (lower is better)
Translates to: VGDARAVLQAQCAQA*AAAQQARQAVVGNV
Trigger: CACGTTACCGACGACTGCCTGGCGCGCCTGCTGCGCTGCTGCCCACGCCTGCGCGCACTGCGCCTGGAGAACTGCGCGCGCGTCACCAAC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR TCA 90 bp GCGCAAGTCGGCGAACTCCGAGTGGTCAGGTCCTCCCCACCGAGGTaGTTTCGGTCCAACGGCGATCGGAGTCCCCGAGGACGGTGCAGG +
Preference number: 1 (lower is better)
Translates to: AQVGELRVVRSSPPR*FRSNGDRSPRGRCR
Trigger: CCTGCACCGTCCTCGGGGACTCCGATCGCCGTTGGACCGAAATCACCTCGGTGGGGAGGACCTGACCACTCGGAGTTCGCCGACTTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560325.1
3UTR CCA 90 bp CCTGGCCTGGGAGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTGGGTaGAGCCGGAGTGTGAACAGCGCCCATCACAGTGCTCCTCGCCTC +
Preference number: 1 (lower is better)
Translates to: PGLGGVKGFVAAGAG*SRSVNSAHHSAPRL
Trigger: GAGGCGAGGAGCACTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCTCCCAGGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR CCA 90 bp AACACCTGGCCTGGGAGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTaGGTGGAGCCGGAGTGTGAACAGCGCCCATCACAGTGCTCCTCG +
Preference number: 1 (lower is better)
Translates to: NTWPGRGKGLCRSWR*VEPECEQRPSQCSS
Trigger: CGAGGAGCACTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCTCCCAGGCCAGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR GCA 90 bp GACCCCGGCCCAGCAGAGTCCTGGGGCGGCTGTGGACAGAGGGAATaGCGGTTCCAGGAGCCACAACCCTTGACTCTTTGTTTCGCTCTG +
Preference number: 1 (lower is better)
Translates to: DPGPAESWGGCGQRE*RFQEPQPLTLCFAL
Trigger: CAGAGCGAAACAAAGAGTCAAGGGTTGTGGCTCCTGGAACCGGCATTCCCTCTGTCCACAGCCGCCCCAGGACTCTGCTGGGCCGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR TCA 90 bp CCGAGGAGGACTCGGGCCCTGCGAGGTGAAGACACTTGGCTGCGATaGCACTGCAGGGTTCCAAGTCGGCTTTCTGGCCGGCCCATTTTC +
Preference number: 1 (lower is better)
Translates to: PRRTRALRGEDTWLR*HCRVPSRLSGRPIF
Trigger: GAAAATGGGCCGGCCAGAAAGCCGACTTGGAACCCTGCAGTGTCATCGCAGCCAAGTGTCTTCACCTCGCAGGGCCCGAGTCCTCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CCA 90 bp AGAAGAAACACCTGGCCTGGGAGGGGTAAAGGGCTTTGTCGCAGCTaGCGCTGGGTGGAGCCGGAGTGTGAACAGCGCCCATCACAGTGC +
Preference number: 1 (lower is better)
Translates to: RRNTWPGRGKGLCRS*RWVEPECEQRPSQC
Trigger: GCACTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCTCCCAGGCCAGGTGTTTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR TCA 90 bp GCGGCTGTGGACAGAGGGAATGCCGGTTCCAGGAGCCACAACCCTTaGCTCTTTGTTTCGCTCTGGATGTGCTGCCTTGCAGGGGAGCGG +
Preference number: 1 (lower is better)
Translates to: AAVDRGNAGSRSHNP*LFVSLWMCCLAGER
Trigger: CCGCTCCCCTGCAAGGCAGCACATCCAGAGCGAAACAAAGAGTCAAGGGTTGTGGCTCCTGGAACCGGCATTCCCTCTGTCCACAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 90 bp ATTTACCGAGGAGGACTCGGGCCCTGCGAGGTGAAGACACTTGGCTaGGATGACACTGCAGGGTTCCAAGTCGGCTTTCTGGCCGGCCCA +
Preference number: 1 (lower is better)
Translates to: IYRGGLGPCEVKTLG*DDTAGFQVGFLAGP
Trigger: TGGGCCGGCCAGAAAGCCGACTTGGAACCCTGCAGTGTCATCGCAGCCAAGTGTCTTCACCTCGCAGGGCCCGAGTCCTCCTCGGTAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CCA 90 bp AGCCTGCAACGGGGCCTTCCACAGGCAGTCCTAACCCGCTTTCCCTaGAAACAAACGGGACCAGCCTGCTTCCAGTCCAGAAGGACCGAC +
Preference number: 1 (lower is better)
Translates to: SLQRGLPQAVLTRFP*KQTGPACFQSRRTD
Trigger: GTCGGTCCTTCTGGACTGGAAGCAGGCTGGTCCCGTTTGTTTCCAGGGAAAGCGGGTTAGGACTGCCTGTGGAAGGCCCCGTTGCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR TCA 90 bp GACCGAGTGGACTCATTTACCGAGGAGGACTCGGGCCCTGCGAGGTaGAGACACTTGGCTGCGATGACACTGCAGGGTTCCAAGTCGGCT +
Preference number: 1 (lower is better)
Translates to: DRVDSFTEEDSGPAR*RHLAAMTLQGSKSA
Trigger: AGCCGACTTGGAACCCTGCAGTGTCATCGCAGCCAAGTGTCTTCACCTCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 90 bp GGTTCCAAGTCGGCTTTCTGGCCGGCCCATTTTCCCTCCTCTTTCTaGCCCTGCACCCCACCGTACCTTCATCTGCGTGGGTTCTTGGCT +
Preference number: 1 (lower is better)
Translates to: GSKSAFWPAHFPSSF*PCTPPYLHLRGFLA
Trigger: AGCCAAGAACCCACGCAGATGAAGGTACGGTGGGGTGCAGGGGCAGAAAGAGGAGGGAAAATGGGCCGGCCAGAAAGCCGACTTGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 90 bp CCCATGGGACCGAGTGGACTCATTTACCGAGGAGGACTCGGGCCCTaGGAGGTGAAGACACTTGGCTGCGATGACACTGCAGGGTTCCAA +
Preference number: 1 (lower is better)
Translates to: PMGPSGLIYRGGLGP*EVKTLGCDDTAGFQ
Trigger: TTGGAACCCTGCAGTGTCATCGCAGCCAAGTGTCTTCACCTCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGGTCCCATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CCA 90 bp GCTCACTGGCTTGTTAAAGCTACCCAACCGCCCCATGGGACCGAGTaGACTCATTTACCGAGGAGGACTCGGGCCCTGCGAGGTGAAGAC +
Preference number: 1 (lower is better)
Translates to: AHWLVKATQPPHGTE*THLPRRTRALRGED
Trigger: GTCTTCACCTCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGGTCCCATGGGGCGGTTGGGTAGCTTTAACAAGCCAGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CCA 90 bp CCTGTGAGTAGGGATCAAGCTCCTCTTTCACACAGAAGAAACACCTaGCCTGGGAGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: PVSRDQAPLSHRRNT*PGRGKGLCRSWRWV
Trigger: CACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCTCCCAGGCCAGGTGTTTCTTCTGTGTGAAAGAGGAGCTTGATCCCTACTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR CCA 90 bp TCTTTGTTTCGCTCTGGATGTGCTGCCTTGCAGGGGAGCGGTGCTTaGCGATTGCTCCAGTCTAGCTTCAAGCTGAGGCCCCTGAATGTC +
Preference number: 1 (lower is better)
Translates to: SLFRSGCAALQGSGA*RLLQSSFKLRPLNV
Trigger: GACATTCAGGGGCCTCAGCTTGAAGCTAGACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAGGCAGCACATCCAGAGCGAAACAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR TCA 90 bp TGTCCCCCTGCCCAGCCATCCTCAGCCATTCCTCCCGACCTGAGCTaGGTGCCAGAAGAACCAGATTCAGTAGACGTTCATCAGTACCTA +
Preference number: 1 (lower is better)
Translates to: CPPAQPSSAIPPDLS*VPEEPDSVDVHQYL
Trigger: TAGGTACTGATGAACGTCTACTGAATCTGGTTCTTCTGGCACTCAGCTCAGGTCGGGAGGAATGGCTGAGGATGGCTGGGCAGGGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 90 bp TCCTTTGTGCCAGGGGAGGGAAGTAAGGAACTTAAATATGTTGGGTaGAGCCAGGTGTCACACCGAGCCCGGGCCTCCTTCAGGTTTGTG +
Preference number: 1 (lower is better)
Translates to: SFVPGEGSKELKYVG*SQVSHRARASFRFV
Trigger: CACAAACCTGAAGGAGGCCCGGGCTCGGTGTGACACCTGGCTGCACCCAACATATTTAAGTTCCTTACTTCCCTCCCCTGGCACAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR TCA 90 bp TTGTACATGAAGAAACTGGCTCCGGCAGCTCAGGTGACTGGCTGGTaGCTTATTTGCTGTCAGACCCAGGACAGATGTCTGAACCTTGCT +
Preference number: 1 (lower is better)
Translates to: LYMKKLAPAAQVTGW*LICCQTQDRCLNLA
Trigger: AGCAAGGTTCAGACATCTGTCCTGGGTCTGACAGCAAATAAGTCACCAGCCAGTCACCTGAGCTGCCGGAGCCAGTTTCTTCATGTACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CCA 90 bp CCCAGTTTTGTACATGAAGAAACTGGCTCCGGCAGCTCAGGTGACTaGCTGGTGACTTATTTGCTGTCAGACCCAGGACAGATGTCTGAA +
Preference number: 1 (lower is better)
Translates to: PSFVHEETGSGSSGD*LVTYLLSDPGQMSE
Trigger: TTCAGACATCTGTCCTGGGTCTGACAGCAAATAAGTCACCAGCCAGTCACCTGAGCTGCCGGAGCCAGTTTCTTCATGTACAAAACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 90 bp CTGGTGACTTATTTGCTGTCAGACCCAGGACAGATGTCTGAACCTTaGTGGGCGTCACTTCCTCATTTGTCAAGTGGGAGGAATTGTTAC +
Preference number: 1 (lower is better)
Translates to: LVTYLLSDPGQMSEP*WASLPHLSSGRNCY
Trigger: GTAACAATTCCTCCCACTTGACAAATGAGGAAGTGACGCCCAGCAAGGTTCAGACATCTGTCCTGGGTCTGACAGCAAATAAGTCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CCA 90 bp GTGACTTATTTGCTGTCAGACCCAGGACAGATGTCTGAACCTTGCTaGGCGTCACTTCCTCATTTGTCAAGTGGGAGGAATTGTTACCTT +
Preference number: 1 (lower is better)
Translates to: VTYLLSDPGQMSEPC*ASLPHLSSGRNCYL
Trigger: AAGGTAACAATTCCTCCCACTTGACAAATGAGGAAGTGACGCCCAGCAAGGTTCAGACATCTGTCCTGGGTCTGACAGCAAATAAGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR TCA 90 bp TTTTCCTTGCCGTTTCCCTATTTGAGCAATGAATTAAGGAACCTGTaGGTAGGGATCAAGCTCCTCTTTCACACAGAAGAAACACCTGGC +
Preference number: 1 (lower is better)
Translates to: FSLPFPYLSNELRNL*VGIKLLFHTEETPG
Trigger: GCCAGGTGTTTCTTCTGTGTGAAAGAGGAGCTTGATCCCTACTCACAGGTTCCTTAATTCATTGCTCAAATAGGGAAACGGCAAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR GCA 90 bp ATCAGTGACTACAGCCCTGAAATTCAAATTGGAAGCCTAGGCTTGTaGTCATGTCCAGCAAATCCAACAGGTGAAAAATCTAGCTTGTCA +
Preference number: 1 (lower is better)
Translates to: ISDYSPEIQIGSLGL*SCPANPTGEKSSLS
Trigger: TGACAAGCTAGATTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAATTTGAATTTCAGGGCTGTAGTCACTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR TCA 90 bp AAGGTGGTTATAAGGATTAGGTGTTTAAGCCTCAAAGGTGTTGGGTaGTCTTTTCTTCTAAGAATCTTTGGAATAATTCTGATACAGGGA +
Preference number: 1 (lower is better)
Translates to: KVVIRIRCLSLKGVG*SFLLRIFGIILIQG
Trigger: TCCCTGTATCAGAATTATTCCAAAGATTCTTAGAAGAAAAGATCACCCAACACCTTTGAGGCTTAAACACCTAATCCTTATAACCACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CAA 90 bp GTCTGCAGCGCGCGCCCGTCCGCCGCCACGGCAGCCAACGTGCGGTaGGTGACGCGCGCGCAGTTCTCCAGGCGCAGTGCGCGCAGGCGT +
Preference number: 2 (lower is better)
Translates to: VCSARPSAATAANVR*VTRAQFSRRSARRR
Trigger: ACGCCTGCGCGCACTGCGCCTGGAGAACTGCGCGCGCGTCACCAACCGCACGTTGGCTGCCGTGGCGGCGGACGGGCGCGCGCTGCAGAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CCA 90 bp TGGAGGTGGCGGTCCCCAGGACACTCCGGGAGCCGGCGGGGTCTCGCTGGGTCGTCGGCGAACTCCGAGTaGTCAGGTCCTCCCCACCGA +
Preference number: 2 (lower is better)
Translates to: WRWRSPGHSGSRRGLAGSSANSE*SGPPHR
Trigger: TCGGTGGGGAGGACCTGACCACTCGGAGTTCGCCGA...CGACCCAGCGAGACCCCGCCGGCTCCCGGAGTGTCCTGGGGACCGCCACCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560325.1
3UTR-3UTR TCA 90 bp AAGTCCACGTGCAATGTCTGCAGCGCGCGCCCGTCCGCCGCCACGGCAGCCAACCCCAGGACAGATGTCTaGACCTTGCTGGGCGTCACT +
Preference number: 2 (lower is better)
Translates to: KSTCNVCSARPSAATAANPRTDV*TLLGVT
Trigger: AGTGACGCCCAGCAAGGTTCAGACATCTGTCCTGGG...GTTGGCTGCCGTGGCGGCGGACGGGCGCGCGCTGCAGACATTGCACGTGGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR GCA 90 bp CTAGAGGCAAGCCCTGAGCAGGTACAGTCACGGACACCCACCCAGGTCGCTTGGTGGGGGACCCTCTGCTaGAGCCTCACCAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: LEASPEQVQSRTPTQVAWWGTLC*SLTSPS
Trigger: GGAGGGGCTGGTGAGGCTGCAGCAGAGGGTCCCCCA...CCAAGCGACCTGGGTGGGTGTCCGTGACTGTACCTGCTCAGGGCTTGCCTCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CCA 90 bp TCTGCCCCTGCACCCCACCGTACCTTCATCTGCGTGGGTTCTTGGCTCGTAGCCCTCCGTGACTGCCCCTaGCTGTGCCAGCTCGGCTCC +
Preference number: 2 (lower is better)
Translates to: SAPAPHRTFICVGSWLVALRDCP*LCQLGS
Trigger: GGAGCCGAGCTGGCACAGCCAGGGGCAGTCACGGAG...GGCTACGAGCCAAGAACCCACGCAGATGAAGGTACGGTGGGGTGCAGGGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CCA 90 bp CCGCCCCATGGGACCGAGTGGACTCATTTACCGAGGAGGACTCGGGCCCTGCGACCTGGGCCACCAGCCTaGAAAAGGGTAGGGTTCGGA +
Preference number: 2 (lower is better)
Translates to: PPHGTEWTHLPRRTRALRPGPPA*KRVGFG
Trigger: TCCGAACCCTACCCTTTTCCAGGCTGGTGGCCCAGG...TCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGGTCCCATGGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR TCA 90 bp GTTAAAGCTACCCAACCGCCCCATGGGACCGAGTGGACTCATTTACCGAGGAGGTCCCCCGCAGCTCCGTaGCTGCCCCTGGCTGTGCCA +
Preference number: 2 (lower is better)
Translates to: VKATQPPHGTEWTHLPRRSPAAP*LPLAVP
Trigger: TGGCACAGCCAGGGGCAGTCACGGAGCTGCGGGGGA...CCTCCTCGGTAAATGAGTCCACTCGGTCCCATGGGGCGGTTGGGTAGCTTTAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR TCA 90 bp TGCGGTGACCCGGGGCTCACTGGCTTGTTAAAGCTACCCAACCGCCCCATGGGATCGGGCCCTGCGAGGTaGAGACACTTGGCTGCGATG +
Preference number: 2 (lower is better)
Translates to: CGDPGLTGLLKLPNRPMGSGPAR*RHLAAM
Trigger: CATCGCAGCCAAGTGTCTTCACCTCGCAGGGCCCGA...TCCCATGGGGCGGTTGGGTAGCTTTAACAAGCCAGTGAGCCCCGGGTCACCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR GCA 90 bp GTGCTGCCTTGCAGGGGAGCGGTGCTTGGCGATTGCTCCAGTCTAGCTTCAAGCGCGTTTCCCTTTCCCTaGCAGCCTCCCCCGCAGCTC +
Preference number: 2 (lower is better)
Translates to: VLPCRGAVLGDCSSLASSAFPFP*QPPPQL
Trigger: GAGCTGCGGGGGAGGCTGGCAGGGAAAGGGAAACGC...GCTTGAAGCTAGACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAGGCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR GCA 90 bp TGCGGTGACCCGGGGCTCACTGGCTTGTTAAAGCTACCCAACCGCCCCATGGGATCGCTCTGGATGTGCTaGCTTGCAGGGGAGCGGTGC +
Preference number: 2 (lower is better)
Translates to: CGDPGLTGLLKLPNRPMGSLWMC*LAGERC
Trigger: GCACCGCTCCCCTGCAAGGCAGCACATCCAGAGCGA...TCCCATGGGGCGGTTGGGTAGCTTTAACAAGCCAGTGAGCCCCGGGTCACCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CCA 90 bp TCTGCCCCTGCACCCCACCGTACCTTCATCTGCGTGGGTTCTTGGCTCGTAGCCGTCCTGGGGCGGCTGTaGACAGAGGGAATGCCGGTT +
Preference number: 2 (lower is better)
Translates to: SAPAPHRTFICVGSWLVAVLGRL*TEGMPV
Trigger: AACCGGCATTCCCTCTGTCCACAGCCGCCCCAGGAC...GGCTACGAGCCAAGAACCCACGCAGATGAAGGTACGGTGGGGTGCAGGGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CAA 90 bp TTGGGTGCAGCCAGGTGTCACACCGAGCCCGGGCCTCCTTCAGGTTaGTGTGCCCTCATTAGTCACCCCGTCAACCTCTGCACCCCCAGT +
Preference number: 2 (lower is better)
Translates to: LGAARCHTEPGPPSG*CALISHPVNLCTPS
Trigger: ACTGGGGGTGCAGAGGTTGACGGGGTGACTAATGAGGGCACACAAACCTGAAGGAGGCCCGGGCTCGGTGTGACACCTGGCTGCACCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR TCA 90 bp ACCCTCAAGGCGGTGGGGGCACGCGTTAGCATTGAGTCCGGGTTCAGCTTAGTACTACCACTGGGGTTGTaGGGAGCCTGCAACGGGGCC +
Preference number: 2 (lower is better)
Translates to: TLKAVGARVSIESGFSLVLPLGL*GACNGA
Trigger: GGCCCCGTTGCAGGCTCCTCACAACCCCAGTGGTAG...TACTAAGCTGAACCCGGACTCAATGCTAACGCGTGCCCCCACCGCCTTGAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CAA 90 bp TTTCGCTCTGGATGTGCTGCCTTGCAGGGGAGCGGTGCTTGGCGATaGCTCCAGTCTAGCTTCAAGCTGAGGCCCCTGAATGTCCCGGCG +
Preference number: 2 (lower is better)
Translates to: FRSGCAALQGSGAWR*LQSSFKLRPLNVPA
Trigger: CGCCGGGACATTCAGGGGCCTCAGCTTGAAGCTAGACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAGGCAGCACATCCAGAGCGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR GCA 90 bp GTCTACCACTGGGGTTGTGAGGAGCCTGCAACGGGGCCTTCCACAGGCAGTCCTCAAACGGGACCAGCCTaGTTCCAGTCCAGAAGGACC +
Preference number: 2 (lower is better)
Translates to: VYHWGCEEPATGPSTGSPQTGPA*FQSRRT
Trigger: GGTCCTTCTGGACTGGAAGCAGGCTGGTCCCGTTTG...AGGACTGCCTGTGGAAGGCCCCGTTGCAGGCTCCTCACAACCCCAGTGGTAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CCA 90 bp AGCCTGCTTCCAGTCCAGAAGGACCGACTAATGGGCCGGGGCCTTGGCTCCCCGGGCAGCTCAGGTGACTaGCTGGTGACTTATTTGCTG +
Preference number: 2 (lower is better)
Translates to: SLLPVQKDRLMGRGLGSPGSSGD*LVTYLL
Trigger: CAGCAAATAAGTCACCAGCCAGTCACCTGAGCTGCC...CGGGGAGCCAAGGCCCCGGCCCATTAGTCGGTCCTTCTGGACTGGAAGCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CCA 90 bp CTTGGCTGCGATGACACTGCAGGGTTCCAAGTCGGCTTTCTGGCCGGCCCATTTCAACCCTCAAGGCGGTaGGGGCACGCGTTAGCATTG +
Preference number: 2 (lower is better)
Translates to: LGCDDTAGFQVGFLAGPFQPSRR*GHALAL
Trigger: CAATGCTAACGCGTGCCCCCACCGCCTTGAGGGTTG...AAATGGGCCGGCCAGAAAGCCGACTTGGAACCCTGCAGTGTCATCGCAGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CAA 90 bp TGGACAGAGGGAATGCCGGTTCCAGGAGCCACAACCCTTGACTCTTaGTTTCGCTCTGGATGTGCTGCCTTGCAGGGGAGCGGTGCTTGG +
Preference number: 2 (lower is better)
Translates to: WTEGMPVPGATTLDS*FRSGCAALQGSGAW
Trigger: CCAAGCACCGCTCCCCTGCAAGGCAGCACATCCAGAGCGAAACAAAGAGTCAAGGGTTGTGGCTCCTGGAACCGGCATTCCCTCTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR TCA 90 bp TGCGGTGACCCGGGGCTCACTGGCTTGTTAAAGCTACCCAACCGCCCCATGGGACCCCAGTTTTGTACATaGAGAAACTGGCTCCGGCAG +
Preference number: 2 (lower is better)
Translates to: CGDPGLTGLLKLPNRPMGPQFCT*RNWLRQ
Trigger: CTGCCGGAGCCAGTTTCTTCATGTACAAAACTGGGG...TCCCATGGGGCGGTTGGGTAGCTTTAACAAGCCAGTGAGCCCCGGGTCACCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CCA 90 bp AGCCTGCTTCCAGTCCAGAAGGACCGACTAATGGGCCGGGGCCTTGGCTCCCCGATGTCTGAACCTTGCTaGGCGTCACTTCCTCATTTG +
Preference number: 2 (lower is better)
Translates to: SLLPVQKDRLMGRGLGSPMSEPC*ASLPHL
Trigger: CAAATGAGGAAGTGACGCCCAGCAAGGTTCAGACAT...CGGGGAGCCAAGGCCCCGGCCCATTAGTCGGTCCTTCTGGACTGGAAGCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CAA 90 bp TCGGCTCCTTTGTGCCAGGGGAGGGAAGTAAGGAACTTAAATATGTaGGGTGCAGCCAGGTGTCACACCGAGCCCGGGCCTCCTTCAGGT +
Preference number: 2 (lower is better)
Translates to: SAPLCQGREVRNLNM*GAARCHTEPGPPSG
Trigger: ACCTGAAGGAGGCCCGGGCTCGGTGTGACACCTGGCTGCACCCAACATATTTAAGTTCCTTACTTCCCTCCCCTGGCACAAAGGAGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR TCA 90 bp GTTAAAGCTACCCAACCGCCCCATGGGACCGAGTGGACTCATTTACCGAGGAGGCCATTCCTCCCGACCTaGGCTGAGTGCCAGAAGAAC +
Preference number: 2 (lower is better)
Translates to: VKATQPPHGTEWTHLPRRPFLPT*AECQKN
Trigger: GTTCTTCTGGCACTCAGCTCAGGTCGGGAGGAATGG...CCTCCTCGGTAAATGAGTCCACTCGGTCCCATGGGGCGGTTGGGTAGCTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR TCA 90 bp CTTGGCTGCGATGACACTGCAGGGTTCCAAGTCGGCTTTCTGGCCGGCCCATTTCTCCGGCAGCTCAGGTaGCTGGCTGGTGACTTATTT +
Preference number: 2 (lower is better)
Translates to: LGCDDTAGFQVGFLAGPFLRQLR*LAGDLF
Trigger: AAATAAGTCACCAGCCAGTCACCTGAGCTGCCGGAG...AAATGGGCCGGCCAGAAAGCCGACTTGGAACCCTGCAGTGTCATCGCAGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR GCA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGAGCGGACTGTCCCCCTaGCCAGCCATCCTCAGCCAT +
Preference number: 2 (lower is better)
Translates to: MRLRICGGGLKVEELGSKSGLSP*PAILSH
Trigger: ATGGCTGAGGATGGCTGGGCAGGGGGACAGTCCGCT...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR GCA 90 bp TTGTTAAAGCTACCCAACCGCCCCATGGGACCGAGTGGACTCATTTACCGAGGACTGGATGTGCTGCCTTaGAGGGGAGCGGTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: LLKLPNRPMGPSGLIYRGLDVLP*RGAVLG
Trigger: GCCAAGCACCGCTCCCCTGCAAGGCAGCACATCCAG...TCCTCGGTAAATGAGTCCACTCGGTCCCATGGGGCGGTTGGGTAGCTTTAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR GCA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGGGAGGACTCGGGCCCTaGGAGGTGAAGACACTTGGC +
Preference number: 2 (lower is better)
Translates to: MRLRICGGGLKVEELGSKGGLGP*EVKTLG
Trigger: GCCAAGTGTCTTCACCTCGCAGGGCCCGAGTCCTCC...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CCA 90 bp TCGGTAACGTGGCCGCAGCCCGAGAGCGTGACGGACGCCAGGTTGGGGCACCTGAAGCCTCAAAGGTGTTaGGTGATCTTTTCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: SVTWPQPESVTDARLGHLKPQRC*VIFSSK
Trigger: CTTAGAAGAAAAGATCACCCAACACCTTTGAGGCTT...CAGGTGCCCCAACCTGGCGTCCGTCACGCTCTCGGGCTGCGGCCACGTTACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CAA 90 bp TGTGTGCCCTCATTAGTCACCCCGTCAACCTCTGCACCCCCAGTTTaGTACATGAAGAAACTGGCTCCGGCAGCTCAGGTGACTGGCTGG +
Preference number: 2 (lower is better)
Translates to: CVPSLVTPSTSAPPV*YMKKLAPAAQVTGW
Trigger: CCAGCCAGTCACCTGAGCTGCCGGAGCCAGTTTCTTCATGTACAAAACTGGGGGTGCAGAGGTTGACGGGGTGACTAATGAGGGCACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR TCA 90 bp CTTGGCTGCGATGACACTGCAGGGTTCCAAGTCGGCTTTCTGGCCGGCCCATTTCAGGTGACTGGCTGGTaGCTTATTTGCTGTCAGACC +
Preference number: 2 (lower is better)
Translates to: LGCDDTAGFQVGFLAGPFQVTGW*LICCQT
Trigger: GGTCTGACAGCAAATAAGTCACCAGCCAGTCACCTG...AAATGGGCCGGCCAGAAAGCCGACTTGGAACCCTGCAGTGTCATCGCAGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CCA 90 bp TGGCCCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAGGGCTTTGTCGCAGCTaGCGCTGGGTGGAGCCGGAG +
Preference number: 2 (lower is better)
Translates to: WPFYPLIYQLPVVSSPTRGLCRS*RWVEPE
Trigger: CTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCC...TCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR CAA 90 bp GAAGAAACTGGCTCCGGCAGCTCAGGTGACTGGCTGGTGACTTATTaGCTGTCAGACCCAGGACAGATGTCTGAACCTTGCTGGGCGTCA +
Preference number: 2 (lower is better)
Translates to: EETGSGSSGDWLVTY*LSDPGQMSEPCWAS
Trigger: TGACGCCCAGCAAGGTTCAGACATCTGTCCTGGGTCTGACAGCAAATAAGTCACCAGCCAGTCACCTGAGCTGCCGGAGCCAGTTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR GCA 90 bp AGACACTTGGCTGCGATGACACTGCAGGGTTCCAAGTCGGCTTTCTGGCCGGCCCTTAAATATGTTGGGTaGAGCCAGGTGTCACACCGA +
Preference number: 2 (lower is better)
Translates to: RHLAAMTLQGSKSAFWPALKYVG*SQVSHR
Trigger: TCGGTGTGACACCTGGCTGCACCCAACATATTTAAG...GGCCGGCCAGAAAGCCGACTTGGAACCCTGCAGTGTCATCGCAGCCAAGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR GCA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGTGTGGACAGAGGGAATaGCGGTTCCAGGAGCCACAA +
Preference number: 2 (lower is better)
Translates to: MRLRICGGGLKVEELGSKCGQRE*RFQEPQ
Trigger: TTGTGGCTCCTGGAACCGGCATTCCCTCTGTCCACA...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR GCA 90 bp GATCAAGCTCCTCTTTCACACAGAAGAAACACCTGGCCTGGGAGGGGTAAAGGGGGAAGCCTAGGCTTGTaGTCATGTCCAGCAAATCCA +
Preference number: 2 (lower is better)
Translates to: DQAPLSHRRNTWPGRGKGGSLGL*SCPANP
Trigger: TGGATTTGCTGGACATGAGCACAAGCCTAGGCTTCC...CCCTTTACCCCTCCCAGGCCAGGTGTTTCTTCTGTGTGAAAGAGGAGCTTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR-3UTR TCA 90 bp CCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAGGTGAATTAAGGAACCTGTaGGTAGGGATCAAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: PSTLLYTSYLLSLPPLEGELRNL*VGIKLL
Trigger: GAGGAGCTTGATCCCTACTCACAGGTTCCTTAATTC...ACCTTCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR CAA 90 bp CACATCAGTGACTACAGCCCTGAAATTCAAATTGGAAGCCTAGGCTaGTGCTCATGTCCAGCAAATCCAACAGGTGAAAAATCTAGCTTG +
Preference number: 2 (lower is better)
Translates to: HISDYSPEIQIGSLG*CSCPANPTGEKSSL
Trigger: CAAGCTAGATTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAATTTGAATTTCAGGGCTGTAGTCACTGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR-3UTR TCA 90 bp TGGCCCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGATCCCTATTTGAGCAATaGATTAAGGAACCTGTGAGT +
Preference number: 2 (lower is better)
Translates to: WPFYPLIYQLPVVSSPTRSLFEQ*IKEPVS
Trigger: ACTCACAGGTTCCTTAATTCATTGCTCAAATAGGGA...TCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR-3UTR CCA 90 bp TGGCCCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGACTTAGCCAGGGCTGCTaGTTTTGTTTTTGTTTAGTT +
Preference number: 2 (lower is better)
Translates to: WPFYPLIYQLPVVSSPTRLSQGC*FCFCLV
Trigger: AACTAAACAAAAACAAAACCAGCAGCCCTGGCTAAG...TCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR CAA 90 bp GGCTTGTGCTCATGTCCAGCAAATCCAACAGGTGAAAAATCTAGCTaGTCAGCTTATAATGGTTCCATTATCAAAAGCTTAGCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: GLCSCPANPTGEKSS*SAYNGSIIKSLARA
Trigger: AGCCCTGGCTAAGCTTTTGATAATGGAACCATTATAAGCTGACAAGCTAGATTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR GCA 72 bp GCGGTTGGTGACGCGCGCGCAGTTCTCCAGGCGCAGTaGGCGCAGGCGTGGGCAGCAGCGCAGCAGGCGCGC +
Preference number: 3 (lower is better)
Translates to: AVGDARAVLQAQ*AQAWAAAQQAR
Trigger: GCGCGCCTGCTGCGCTGCTGCCCACGCCTGCGCGCACTGCGCCTGGAGAACTGCGCGCGCGTCACCAACCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR TCA 72 bp GCCCGTCCGCCGCCACGGCAGCCAACGTGCGGTTGGTaGCGCGCGCGCAGTTCTCCAGGCGCAGTGCGCGCA +
Preference number: 3 (lower is better)
Translates to: ARPPPRQPTCGW*RARSSPGAVRA
Trigger: TGCGCGCACTGCGCCTGGAGAACTGCGCGCGCGTCACCAACCGCACGTTGGCTGCCGTGGCGGCGGACGGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 72 bp AGGCCGGCCGCGCTCACGTTGCGGCAGAAGTCCACGTaGAATGTCTGCAGCGCGCGCCCGTCCGCCGCCACG +
Preference number: 3 (lower is better)
Translates to: RPAALTLRQKST*NVCSARPSAAT
Trigger: CGTGGCGGCGGACGGGCGCGCGCTGCAGACATTGCACGTGGACTTCTGCCGCAACGTGAGCGCGGCCGGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 72 bp TTTCGGTCCAACGGCGATCGGAGTCCCCGAGGACGGTaGAGGCGCCTCCCGCCTCCGTGGGGAGCGCACAGC +
Preference number: 3 (lower is better)
Translates to: FRSNGDRSPRGR*RRLPPPWGAHS
Trigger: GCTGTGCGCTCCCCACGGAGGCGGGAGGCGCCTGCACCGTCCTCGGGGACTCCGATCGCCGTTGGACCGAAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560325.1
3UTR CCA 72 bp GAAGGTGGAAGAGCTGGGTTCGAAGCCAGGACGGTCTaGGGCTGCGCTCCTTCCCCGGGGGCAGCGGCGGGG +
Preference number: 3 (lower is better)
Translates to: EGGRAGFEARTV*GCAPSPGAAAG
Trigger: CCCCGCCGCTGCCCCCGGGGAAGGAGCGCAGCCCCAGACCGTCCTGGCTTCGAACCCAGCTCTTCCACCTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
3UTR GCA 72 bp GCGCTCACGTTGCGGCAGAAGTCCACGTGCAATGTCTaGAGCGCGCGCCCGTCCGCCGCCACGGCAGCCAAC +
Preference number: 3 (lower is better)
Translates to: ALTLRQKSTCNV*SARPSAATAAN
Trigger: GTTGGCTGCCGTGGCGGCGGACGGGCGCGCGCTGCAGACATTGCACGTGGACTTCTGCCGCAACGTGAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CAA 90 bp TCGGTAACGTGGCCGCAGCCCGAGAGCGTGACGGACGCCAGGTTGGGGCACCTGTCTGGATGTGCTGCCTaGCAGGGGAGCGGTGCTTGG +
Preference number: 3 (lower is better)
Translates to: SVTWPQPESVTDARLGHLSGCAA*QGSGAW
Trigger: CCAAGCACCGCTCCCCTGCAAGGCAGCACATCCAGA...CAGGTGCCCCAACCTGGCGTCCGTCACGCTCTCGGGCTGCGGCCACGTTACCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR TCA 72 bp GCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTaGACAGCGCCCATCACAGTGCTCCTCGCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: ALSQLALGGAGV*TAPITVLLASS
Trigger: GGAAGAGGCGAGGAGCACTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR TCA 72 bp GGCGAACTCCGAGTGGTCAGGTCCTCCCCACCGAGGTaGTTTCGGTCCAACGGCGATCGGAGTCCCCGAGGA +
Preference number: 3 (lower is better)
Translates to: GELRVVRSSPPR*FRSNGDRSPRG
Trigger: TCCTCGGGGACTCCGATCGCCGTTGGACCGAAATCACCTCGGTGGGGAGGACCTGACCACTCGGAGTTCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560325.1
3UTR CCA 72 bp CCTGGGAGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTaGGTGGAGCCGGAGTGTGAACAGCGCCCATCACAG +
Preference number: 3 (lower is better)
Translates to: PGRGKGLCRSWR*VEPECEQRPSQ
Trigger: CTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCTCCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR CCA 72 bp GGAGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTGGGTaGAGCCGGAGTGTGAACAGCGCCCATCACAGTGCT +
Preference number: 3 (lower is better)
Translates to: GGVKGFVAAGAG*SRSVNSAHHSA
Trigger: AGCACTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR CCA 72 bp GGCCTAGTGACAGGCCCATCCCAACCCTCAAGGCGGTaGGGGCACGCGTTAGCATTGAGTCCGGGTTCAGCT +
Preference number: 3 (lower is better)
Translates to: GLVTGPSQPSRR*GHALALSPGSA
Trigger: AGCTGAACCCGGACTCAATGCTAACGCGTGCCCCCACCGCCTTGAGGGTTGGGATGGGCCTGTCACTAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CCA 72 bp CCTGCACCCCACCGTACCTTCATCTGCGTGGGTTCTTaGCTCGTAGCCTTGGGAGCCCCTAGTGGGAAGCCC +
Preference number: 3 (lower is better)
Translates to: PAPHRTFICVGS*LVALGAPSGKP
Trigger: GGGCTTCCCACTAGGGGCTCCCAAGGCTACGAGCCAAGAACCCACGCAGATGAAGGTACGGTGGGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR TCA 72 bp ACTCGGGCCCTGCGAGGTGAAGACACTTGGCTGCGATaGCACTGCAGGGTTCCAAGTCGGCTTTCTGGCCGG +
Preference number: 3 (lower is better)
Translates to: TRALRGEDTWLR*HCRVPSRLSGR
Trigger: CCGGCCAGAAAGCCGACTTGGAACCCTGCAGTGTCATCGCAGCCAAGTGTCTTCACCTCGCAGGGCCCGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 72 bp TGGGTGGAGCCGGAGTGTGAACAGCGCCCATCACAGTaGTCCTCGCCTCTTCCACCCACCCAGAATTCTCCC +
Preference number: 3 (lower is better)
Translates to: WVEPECEQRPSQ*SSPLPPTQNSP
Trigger: GGGAGAATTCTGGGTGGGTGGAAGAGGCGAGGAGCACTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR CCA 72 bp CGCTCTGGATGTGCTGCCTTGCAGGGGAGCGGTGCTTaGCGATTGCTCCAGTCTAGCTTCAAGCTGAGGCCC +
Preference number: 3 (lower is better)
Translates to: RSGCAALQGSGA*RLLQSSFKLRP
Trigger: GGGCCTCAGCTTGAAGCTAGACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAGGCAGCACATCCAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 72 bp CCAGCAGAGTCCTGGGGCGGCTGTGGACAGAGGGAATaGCGGTTCCAGGAGCCACAACCCTTGACTCTTTGT +
Preference number: 3 (lower is better)
Translates to: PAESWGGCGQRE*RFQEPQPLTLC
Trigger: ACAAAGAGTCAAGGGTTGTGGCTCCTGGAACCGGCATTCCCTCTGTCCACAGCCGCCCCAGGACTCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 72 bp GGAGGACTCGGGCCCTGCGAGGTGAAGACACTTGGCTaGGATGACACTGCAGGGTTCCAAGTCGGCTTTCTG +
Preference number: 3 (lower is better)
Translates to: GGLGPCEVKTLG*DDTAGFQVGFL
Trigger: CAGAAAGCCGACTTGGAACCCTGCAGTGTCATCGCAGCCAAGTGTCTTCACCTCGCAGGGCCCGAGTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CCA 72 bp CGGGGCCTTCCACAGGCAGTCCTAACCCGCTTTCCCTaGAAACAAACGGGACCAGCCTGCTTCCAGTCCAGA +
Preference number: 3 (lower is better)
Translates to: RGLPQAVLTRFP*KQTGPACFQSR
Trigger: TCTGGACTGGAAGCAGGCTGGTCCCGTTTGTTTCCAGGGAAAGCGGGTTAGGACTGCCTGTGGAAGGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CAA 90 bp TGCGGTGACCCGGGGCTCACTGGCTTGTTAAAGCTACCCAACCGCCCCATGGGAGGGCCTCCTTCAGGTTaGTGTGCCCTCATTAGTCAC +
Preference number: 3 (lower is better)
Translates to: CGDPGLTGLLKLPNRPMGGPPSG*CALISH
Trigger: GTGACTAATGAGGGCACACAAACCTGAAGGAGGCCC...TCCCATGGGGCGGTTGGGTAGCTTTAACAAGCCAGTGAGCCCCGGGTCACCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR TCA 72 bp GACTCATTTACCGAGGAGGACTCGGGCCCTGCGAGGTaGAGACACTTGGCTGCGATGACACTGCAGGGTTCC +
Preference number: 3 (lower is better)
Translates to: DSFTEEDSGPAR*RHLAAMTLQGS
Trigger: GGAACCCTGCAGTGTCATCGCAGCCAAGTGTCTTCACCTCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR GCA 72 bp CCGAGTGGACTCATTTACCGAGGAGGACTCGGGCCCTaGGAGGTGAAGACACTTGGCTGCGATGACACTGCA +
Preference number: 3 (lower is better)
Translates to: PSGLIYRGGLGP*EVKTLGCDDTA
Trigger: TGCAGTGTCATCGCAGCCAAGTGTCTTCACCTCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CCA 72 bp CTTGTTAAAGCTACCCAACCGCCCCATGGGACCGAGTaGACTCATTTACCGAGGAGGACTCGGGCCCTGCGA +
Preference number: 3 (lower is better)
Translates to: LVKATQPPHGTE*THLPRRTRALR
Trigger: TCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGGTCCCATGGGGCGGTTGGGTAGCTTTAACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CAA 90 bp ACCAGCCTGCTTCCAGTCCAGAAGGACCGACTAATGGGCCGGGGCCTTGGCTCCTCTGCACCCCCAGTTTaGTACATGAAGAAACTGGCT +
Preference number: 3 (lower is better)
Translates to: TSLLPVQKDRLMGRGLGSSAPPV*YMKKLA
Trigger: AGCCAGTTTCTTCATGTACAAAACTGGGGGTGCAGA...GGAGCCAAGGCCCCGGCCCATTAGTCGGTCCTTCTGGACTGGAAGCAGGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CAA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGACCCACCCAGGTCGCTaGGCCAGAAAGCTTGGGGGA +
Preference number: 3 (lower is better)
Translates to: MRLRICGGGLKVEELGSKTHPGR*ARKLGG
Trigger: TCCCCCAAGCTTTCTGGCCAAGCGACCTGGGTGGGT...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CAA 90 bp GTCTACCACTGGGGTTGTGAGGAGCCTGCAACGGGGCCTTCCACAGGCAGTCCTGCGTCACTTCCTCATTaGTCAAGTGGGAGGAATTGT +
Preference number: 3 (lower is better)
Translates to: VYHWGCEEPATGPSTGSPASLPH*SSGRNC
Trigger: ACAATTCCTCCCACTTGACAAATGAGGAAGTGACGC...AGGACTGCCTGTGGAAGGCCCCGTTGCAGGCTCCTCACAACCCCAGTGGTAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR TCA 72 bp GACAGAGGGAATGCCGGTTCCAGGAGCCACAACCCTTaGCTCTTTGTTTCGCTCTGGATGTGCTGCCTTGCA +
Preference number: 3 (lower is better)
Translates to: DRGNAGSRSHNP*LFVSLWMCCLA
Trigger: TGCAAGGCAGCACATCCAGAGCGAAACAAAGAGTCAAGGGTTGTGGCTCCTGGAACCGGCATTCCCTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CCA 72 bp AGGGATCAAGCTCCTCTTTCACACAGAAGAAACACCTaGCCTGGGAGGGGTAAAGGGCTTTGTCGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: RDQAPLSHRRNT*PGRGKGLCRSW
Trigger: CCAGCTGCGACAAAGCCCTTTACCCCTCCCAGGCCAGGTGTTTCTTCTGTGTGAAAGAGGAGCTTGATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR TCA 72 bp AAGAAACTGGCTCCGGCAGCTCAGGTGACTGGCTGGTaGCTTATTTGCTGTCAGACCCAGGACAGATGTCTG +
Preference number: 3 (lower is better)
Translates to: KKLAPAAQVTGW*LICCQTQDRCL
Trigger: CAGACATCTGTCCTGGGTCTGACAGCAAATAAGTCACCAGCCAGTCACCTGAGCTGCCGGAGCCAGTTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CCA 72 bp GTACATGAAGAAACTGGCTCCGGCAGCTCAGGTGACTaGCTGGTGACTTATTTGCTGTCAGACCCAGGACAG +
Preference number: 3 (lower is better)
Translates to: VHEETGSGSSGD*LVTYLLSDPGQ
Trigger: CTGTCCTGGGTCTGACAGCAAATAAGTCACCAGCCAGTCACCTGAGCTGCCGGAGCCAGTTTCTTCATGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR TCA 72 bp GGTGACTTATTTGCTGTCAGACCCAGGACAGATGTCTaGACCTTGCTGGGCGTCACTTCCTCATTTGTCAAG +
Preference number: 3 (lower is better)
Translates to: GDLFAVRPRTDV*TLLGVTSSFVK
Trigger: CTTGACAAATGAGGAAGTGACGCCCAGCAAGGTTCAGACATCTGTCCTGGGTCTGACAGCAAATAAGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR-3UTR CAA 90 bp TGGCCCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGACCAGGGCTGCTGGTTTaGTTTTTGTTTAGTTTGAGG +
Preference number: 3 (lower is better)
Translates to: WPFYPLIYQLPVVSSPTRPGLLV*FLFSLR
Trigger: CCTCAAACTAAACAAAAACAAAACCAGCAGCCCTGG...TCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR-3UTR CAA 90 bp CCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAGGTATTGGAAGCCTAGGCTaGTGCTCATGTCCAGCAAAT +
Preference number: 3 (lower is better)
Translates to: PSTLLYTSYLLSLPPLEGIGSLG*CSCPAN
Trigger: ATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAAT...ACCTTCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR-3UTR CAA 90 bp CCCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAGGGGTGAAAAATCTAGCTaGTCAGCTTATAATGGTTCC +
Preference number: 3 (lower is better)
Translates to: PFYPLIYQLPVVSSPTRRGEKSS*SAYNGS
Trigger: GGAACCATTATAAGCTGACAAGCTAGATTTTTCACC...CCTTCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR-3UTR CAA 90 bp CCCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAGGTTGCCGTTTCCCTATTaGAGCAATGAATTAAGGAAC +
Preference number: 3 (lower is better)
Translates to: PFYPLIYQLPVVSSPTRRLPFPY*SNELRN
Trigger: GTTCCTTAATTCATTGCTCAAATAGGGAAACGGCAA...CCTTCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR-3UTR CAA 90 bp CCCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAGGGTAAGCATTCAACAATaGGGAGCGAATTTTCTACAA +
Preference number: 3 (lower is better)
Translates to: PFYPLIYQLPVVSSPTRRVSIQQ*GANFLQ
Trigger: TTGTAGAAAATTCGCTCCCAATTGTTGAATGCTTAC...CCTTCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR-3UTR CAA 90 bp CCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAGGTAATTTGTCTTTTTCCTaGCCGTTTCCCTATTTGAGC +
Preference number: 3 (lower is better)
Translates to: PSTLLYTSYLLSLPPLEGNLSFS*PFPYLS
Trigger: GCTCAAATAGGGAAACGGCAAGGAAAAAGACAAATT...ACCTTCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR TCA 72 bp CCGTTTCCCTATTTGAGCAATGAATTAAGGAACCTGTaGGTAGGGATCAAGCTCCTCTTTCACACAGAAGAA +
Preference number: 3 (lower is better)
Translates to: PFPYLSNELRNL*VGIKLLFHTEE
Trigger: TTCTTCTGTGTGAAAGAGGAGCTTGATCCCTACTCACAGGTTCCTTAATTCATTGCTCAAATAGGGAAACGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR GCA 72 bp TACAGCCCTGAAATTCAAATTGGAAGCCTAGGCTTGTaGTCATGTCCAGCAAATCCAACAGGTGAAAAATCT +
Preference number: 3 (lower is better)
Translates to: YSPEIQIGSLGL*SCPANPTGEKS
Trigger: AGATTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAATTTGAATTTCAGGGCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR CAA 72 bp GCGCGCCCGTCCGCCGCCACGGCAGCCAACGTGCGGTaGGTGACGCGCGCGCAGTTCTCCAGGCGCAGTGCG +
Preference number: 4 (lower is better)
Translates to: ARPSAATAANVR*VTRAQFSRRSA
Trigger: CGCACTGCGCCTGGAGAACTGCGCGCGCGTCACCAACCGCACGTTGGCTGCCGTGGCGGCGGACGGGCGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp AGGTGGCGGTCCCCAGGACACTCCGGGAGCCGGCGGGGTCTCGCTGGGTCGCTCCGGGGCTCCTGGAGGTaGCGGTCCCCAGGACACTCC +
Preference number: 4 (lower is better)
Translates to: RWRSPGHSGSRRGLAGSLRGSWR*RSPGHS
Trigger: GGAGTGTCCTGGGGACCGCCACCTCCAGGAGCCCCG...GAGCGACCCAGCGAGACCCCGCCGGCTCCCGGAGTGTCCTGGGGACCGCCACCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS-3UTR CCA 90 bp CGATCGGAGTCCCCGAGGACGGTGCAGGCGCCTCCCGCCTCCGTGGGGAGCGCACACCACCGGGGCTCCTaGAGGTGGCGGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RSESPRTVQAPPASVGSAHHRGS*RWRSPG
Trigger: TCCTGGGGACCGCCACCTCCAGGAGCCCCGGTGGTG...TGCGCTCCCCACGGAGGCGGGAGGCGCCTGCACCGTCCTCGGGGACTCCGATCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS-3UTR GCA 90 bp CTGGAGGTGGCGGTCCCCAGGACACTCCGGGAGCCGGCGGGGTCTCGCTGGGTCCTGCCCGTGCGCCCCTaGTTCCCCTCCTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LEVAVPRTLREPAGSRWVLPVRP*FPSSCF
Trigger: GAAGCAGGAGGAGGGGAAGCAGGGGCGCACGGGCAG...GACCCAGCGAGACCCCGCCGGCTCCCGGAGTGTCCTGGGGACCGCCACCTCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS-3UTR GCA 90 bp CGTCACCCCCGAGCGCAAGTCGGCGAACTCCGAGTGGTCAGGTCCTCCCCACCGAGTCCCCGAGGACGGTaGAGGCGCCTCCCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: RHPRAQVGELRVVRSSPPSPRGR*RRLPPP
Trigger: CGGAGGCGGGAGGCGCCTGCACCGTCCTCGGGGACT...CGGTGGGGAGGACCTGACCACTCGGAGTTCGCCGACTTGCGCTCGGGGGTGACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS-3UTR TCA 90 bp TCGGTAACGTGGCCGCAGCCCGAGAGCGTGACGGACGCCAGGTTGGGGCACCTGCCAACGTGCGGTTGGTaGCGCGCGCGCAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SVTWPQPESVTDARLGHLPTCGW*RARSSP
Trigger: TGGAGAACTGCGCGCGCGTCACCAACCGCACGTTGG...CAGGTGCCCCAACCTGGCGTCCGTCACGCTCTCGGGCTGCGGCCACGTTACCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp GTGATTTCGGTCCAACGGCGATCGGAGTCCCCGAGGACGGTGCAGGCGCCTCCCGGCTCCTTCTGCCCGTaGGCCCCTGCTTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: VISVQRRSESPRTVQAPPGSFCP*APASPP
Trigger: AGGAGGGGAAGCAGGGGCGCACGGGCAGAAGGAGCC...GGGAGGCGCCTGCACCGTCCTCGGGGACTCCGATCGCCGTTGGACCGAAATCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS-3UTR CCA 90 bp GTGATTTCGGTCCAACGGCGATCGGAGTCCCCGAGGACGGTGCAGGCGCCTCCCCGCCTCCCGCCTCCGTaGGGAGCGCACAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: VISVQRRSESPRTVQAPPRLPPP*GAHSRK
Trigger: CTTTCTGCTGTGCGCTCCCCACGGAGGCGGGAGGCG...GGGAGGCGCCTGCACCGTCCTCGGGGACTCCGATCGCCGTTGGACCGAAATCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS-3UTR TCA 90 bp GCCCTGGCCCCCGTCACCCCCGAGCGCAAGTCGGCGAACTCCGAGTGGTCAGGTTCCTCCCCACCGAGGTaGTTTCGGTCCAACGGCGAT +
Preference number: 4 (lower is better)
Translates to: ALAPVTPERKSANSEWSGSSPPR*FRSNGD
Trigger: ATCGCCGTTGGACCGAAATCACCTCGGTGGGGAGGA...ACCTGACCACTCGGAGTTCGCCGACTTGCGCTCGGGGGTGACGGGGGCCAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS-3UTR TCA 90 bp TGCGGTGACCCGGGGCTCACTGGCTTGTTAAAGCTACCCAACCGCCCCATGGGACGCAGCCCGAGAGCGTaGCGGACGCCAGGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: CGDPGLTGLLKLPNRPMGRSPRA*RTPGWG
Trigger: GCCCCAACCTGGCGTCCGTCACGCTCTCGGGCTGCG...TCCCATGGGGCGGTTGGGTAGCTTTAACAAGCCAGTGAGCCCCGGGTCACCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp GGAGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACCGGGGCTCCTGGAGGTaGCGGTCCCCAGGACACTCC +
Preference number: 4 (lower is better)
Translates to: GGVKGFVAAGAGWSRSVNRGSWR*RSPGHS
Trigger: GGAGTGTCCTGGGGACCGCCACCTCCAGGAGCCCCG...GTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp TCTGCCCCTGCACCCCACCGTACCTTCATCTGCGTGGGTTCTTGGCTCGTAGCCCAGTGCGCGCAGGCGTaGGCAGCAGCGCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SAPAPHRTFICVGSWLVAQCAQA*AAAQQA
Trigger: CGCCTGCTGCGCTGCTGCCCACGCCTGCGCGCACTG...GGCTACGAGCCAAGAACCCACGCAGATGAAGGTACGGTGGGGTGCAGGGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp GCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGCGCCCATCACAGTGCTCCTAGCAGTGGCCACATGTaGGTGCAGCTGCAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: AAGAGWSRSVNSAHHSAPSSGHM*VQLQPG
Trigger: CCCCGGCTGCAGCTGCACTCACATGTGGCCACTGCT...AGGAGCACTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp GCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGCGCCCATCACAGTGCTCCTGTGGCCACATGTGAGTaGAGCTGCAGCCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: AAGAGWSRSVNSAHHSAPVATCE*SCSRGT
Trigger: CGTCCCCCGGCTGCAGCTGCACTCACATGTGGCCAC...AGGAGCACTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp GGAGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACGCGGGCAGACGCGCGTaGGGGCAAAACCGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GGVKGFVAAGAGWSRSVNAGRRA*GQNRKE
Trigger: CTCCTTGCGGTTTTGCCCGCACGCGCGTCTGCCCGC...GTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp GTCACCCCCGAGCGCAAGTCGGCGAACTCCGAGTGGTCAGGTCCTCCCCACCGATCGGCGAACTCCGAGTaGTCAGGTCCTCCCCACCGA +
Preference number: 4 (lower is better)
Translates to: VTPERKSANSEWSGPPHRSANSE*SGPPHR
Trigger: TCGGTGGGGAGGACCTGACCACTCGGAGTTCGCCGA...TCGGTGGGGAGGACCTGACCACTCGGAGTTCGCCGACTTGCGCTCGGGGGTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS-3UTR GCA 90 bp GAGTGTGAACAGCGCCCATCACAGTGCTCCTCGCCTCTTCCACCCACCCAGAATAGTCCCCGAGGACGGTaGAGGCGCCTCCCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ECEQRPSQCSSPLPPTQNSPRGR*RRLPPP
Trigger: CGGAGGCGGGAGGCGCCTGCACCGTCCTCGGGGACT...ATTCTGGGTGGGTGGAAGAGGCGAGGAGCACTGTGATGGGCGCTGTTCACACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp CATGGGACCGAGTGGACTCATTTACCGAGGAGGACTCGGGCCCTGCGAGGTGAAGCTGGTCGGGCAGCATaGCGGCGCTGTGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: HGTEWTHLPRRTRALRGEAGRAA*RRCALP
Trigger: GGGCAGAGCACAGCGCCGCCATGCTGCCCGACCAGC...TTCACCTCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGGTCCCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp CCGGCCCAGCAGAGTCCTGGGGCGGCTGTGGACAGAGGGAATGCCGGTTCCAGGCCTTCTGGAGTTCAGTaGGGGAACGGAAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PAQQSPGAAVDRGNAGSRPSGVQ*GNGSAA
Trigger: TGCTGCACTTCCGTTCCCTCACTGAACTCCAGAAGG...CCTGGAACCGGCATTCCCTCTGTCCACAGCCGCCCCAGGACTCTGCTGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp ACCCTCAAGGCGGTGGGGGCACGCGTTAGCATTGAGTCCGGGTTCAGCTTAGTATCCCCCGCAGCTCCGTaGCTGCCCCTGGCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: TLKAVGARVSIESGFSLVSPAAP*LPLAVP
Trigger: TGGCACAGCCAGGGGCAGTCACGGAGCTGCGGGGGA...TACTAAGCTGAACCCGGACTCAATGCTAACGCGTGCCCCCACCGCCTTGAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp AGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGGGAGAGGCTGCGGAGTaGCGGGCCCAGGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: RGKGLCRSWRWVEPECEQGEAAE*RAQEEV
Trigger: AACTTCCTCCTGGGCCCGGCACTCCGCAGCCTCTCC...CTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp AAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGCGCCCACAGCGCCCATCACAGTaGTCCTCGCCTCTTCCACCC +
Preference number: 4 (lower is better)
Translates to: KGLCRSWRWVEPECEQRPQRPSQ*SSPLPP
Trigger: GGGTGGAAGAGGCGAGGAGCACTGTGATGGGCGCTG...TGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp AGACACTTGGCTGCGATGACACTGCAGGGTTCCAAGTCGGCTTTCTGGCCGGCCTGGGGGACCCTCTGCTaGAGCCTCACCAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RHLAAMTLQGSKSAFWPAWGTLC*SLTSPS
Trigger: GGAGGGGCTGGTGAGGCTGCAGCAGAGGGTCCCCCA...GGCCGGCCAGAAAGCCGACTTGGAACCCTGCAGTGTCATCGCAGCCAAGTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp TCTGCCCCTGCACCCCACCGTACCTTCATCTGCGTGGGTTCTTGGCTCGTAGCCCGGCCGCGCTCACGTTaGGGCAGAAGTCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: SAPAPHRTFICVGSWLVARPRSR*GRSPRA
Trigger: TGCACGTGGACTTCTGCCGCAACGTGAGCGCGGCCG...GGCTACGAGCCAAGAACCCACGCAGATGAAGGTACGGTGGGGTGCAGGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp CCAACGGCGATCGGAGTCCCCGAGGACGGTGCAGGCGCCTCCCGCCTCCGTGGGAGAAAGCCTACTATGTaGCAGGTGCCACTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: PTAIGVPEDGAGASRLRGRKPTM*QVPLCH
Trigger: ATGACACAGTGGCACCTGGCACATAGTAGGCTTTCT...CCCACGGAGGCGGGAGGCGCCTGCACCGTCCTCGGGGACTCCGATCGCCGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS-3UTR CCA 90 bp GCTCTGGATGTGCTGCCTTGCAGGGGAGCGGTGCTTGGCGATTGCTCCAGTCTAGGCCCAGCAGAGTCCTaGGGCGGCTGTGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: ALDVLPCRGAVLGDCSSLGPAES*GGCGQR
Trigger: CCTCTGTCCACAGCCGCCCCAGGACTCTGCTGGGCC...TAGACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAGGCAGCACATCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp AAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGCGCCCAGGAGGAGGAAATCATTaGCCAGGCTCTCGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: KGLCRSWRWVEPECEQRPGGGNH*PGSRAG
Trigger: GCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCC...TGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR TCA 90 bp CCGCCCCATGGGACCGAGTGGACTCATTTACCGAGGAGGACTCGGGCCCTGCGACCCAGGACAGATGTCTaGACCTTGCTGGGCGTCACT +
Preference number: 4 (lower is better)
Translates to: PPHGTEWTHLPRRTRALRPRTDV*TLLGVT
Trigger: AGTGACGCCCAGCAAGGTTCAGACATCTGTCCTGGG...TCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGGTCCCATGGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp GCTCTGGATGTGCTGCCTTGCAGGGGAGCGGTGCTTGGCGATTGCTCCAGTCTAAGGTTGGGGCACCTGTaGGGAGAGTGCGGTGACCCG +
Preference number: 4 (lower is better)
Translates to: ALDVLPCRGAVLGDCSSLRLGHL*GECGDP
Trigger: CGGGTCACCGCACTCTCCTCACAGGTGCCCCAACCT...TAGACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAGGCAGCACATCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp TTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGCGCCCATCACAGTGCCAGTCCTCAATGCTaGACACCTGCACGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: FVAAGAGWSRSVNSAHHSASPQC*TPARGW
Trigger: CCAGCCGCGTGCAGGTGTGCAGCATTGAGGACTGGC...ACTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp GTCTACCACTGGGGTTGTGAGGAGCCTGCAACGGGGCCTTCCACAGGCAGTCCTCTGGATGTGCTGCCTTaGAGGGGAGCGGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: VYHWGCEEPATGPSTGSPLDVLP*RGAVLG
Trigger: GCCAAGCACCGCTCCCCTGCAAGGCAGCACATCCAG...AGGACTGCCTGTGGAAGGCCCCGTTGCAGGCTCCTCACAACCCCAGTGGTAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp TCGGTAACGTGGCCGCAGCCCGAGAGCGTGACGGACGCCAGGTTGGGGCACCTGCACCGTACCTTCATCTaGGTGGGTTCTTGGCTCGTA +
Preference number: 4 (lower is better)
Translates to: SVTWPQPESVTDARLGHLHRTFI*VGSWLV
Trigger: TACGAGCCAAGAACCCACGCAGATGAAGGTACGGTG...CAGGTGCCCCAACCTGGCGTCCGTCACGCTCTCGGGCTGCGGCCACGTTACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp AGTGACAGGCCCATCCCAACCCTCAAGGCGGTGGGGGCACGCGTTAGCATTGAGGGAGGACTCGGGCCCTaGGAGGTGAAGACACTTGGC +
Preference number: 4 (lower is better)
Translates to: SDRPIPTLKAVGARVSIEGGLGP*EVKTLG
Trigger: GCCAAGTGTCTTCACCTCGCAGGGCCCGAGTCCTCC...CTCAATGCTAACGCGTGCCCCCACCGCCTTGAGGGTTGGGATGGGCCTGTCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp CTTGGCTGCGATGACACTGCAGGGTTCCAAGTCGGCTTTCTGGCCGGCCCATTTTCCACGTGCAATGTCTaGAGCGCGCGCCCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: LGCDDTAGFQVGFLAGPFSTCNV*SARPSA
Trigger: GGCGGACGGGCGCGCGCTGCAGACATTGCACGTGGA...AAATGGGCCGGCCAGAAAGCCGACTTGGAACCCTGCAGTGTCATCGCAGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp GGAGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAACACGTCGTGGAGCTaGGAGCAGGTCCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GGVKGFVAAGAGWSRSVNNTSWS*EQVLAR
Trigger: CCTTGCCAGGACCTGCTCCCAGCTCCACGACGTGTT...GTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp ACCCTCAAGGCGGTGGGGGCACGCGTTAGCATTGAGTCCGGGTTCAGCTTAGTACTCCGTGACTGCCCCTaGCTGTGCCAGCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: TLKAVGARVSIESGFSLVLRDCP*LCQLGS
Trigger: GGAGCCGAGCTGGCACAGCCAGGGGCAGTCACGGAG...TACTAAGCTGAACCCGGACTCAATGCTAACGCGTGCCCCCACCGCCTTGAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp AGCCTGCTTCCAGTCCAGAAGGACCGACTAATGGGCCGGGGCCTTGGCTCCCCGATCTGCGTGGGTTCTTaGCTCGTAGCCTTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SLLPVQKDRLMGRGLGSPICVGS*LVALGA
Trigger: GGCTCCCAAGGCTACGAGCCAAGAACCCACGCAGAT...CGGGGAGCCAAGGCCCCGGCCCATTAGTCGGTCCTTCTGGACTGGAAGCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp GTGCTGCCTTGCAGGGGAGCGGTGCTTGGCGATTGCTCCAGTCTAGCTTCAAGCCAGTCGTCGGTAACGTaGCCGCAGCCCGAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: VLPCRGAVLGDCSSLASSQSSVT*PQPESV
Trigger: CACGCTCTCGGGCTGCGGCCACGTTACCGACGACTG...GCTTGAAGCTAGACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAGGCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp TCTGCCCCTGCACCCCACCGTACCTTCATCTGCGTGGGTTCTTGGCTCGTAGCCGCAGGCACTCCCGGTTaGGCTGGGTTATGTGCATGG +
Preference number: 4 (lower is better)
Translates to: SAPAPHRTFICVGSWLVAAGTPG*AGLCAW
Trigger: CCATGCACATAACCCAGCTCAACCGGGAGTGCCTGC...GGCTACGAGCCAAGAACCCACGCAGATGAAGGTACGGTGGGGTGCAGGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp CCGCCCCATGGGACCGAGTGGACTCATTTACCGAGGAGGACTCGGGCCCTGCGAGACACTTGGCTGCGATaGCACTGCAGGGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PPHGTEWTHLPRRTRALRDTWLR*HCRVPS
Trigger: ACTTGGAACCCTGCAGTGTCATCGCAGCCAAGTGTC...TCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGGTCCCATGGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp ACTGTGCAGACGGGGAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGCGCAGCCCGAGAGCGTaGCGGACGCCAGGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: TVQTGKMRLRICGGGLKVRSPRA*RTPGWG
Trigger: GCCCCAACCTGGCGTCCGTCACGCTCTCGGGCTGCG...CACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTCCCCGTCTGCACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp GTCTACCACTGGGGTTGTGAGGAGCCTGCAACGGGGCCTTCCACAGGCAGTCCTGTGAGGGAACGGAAGTaGAGCAGGGACCAGAGTGCG +
Preference number: 4 (lower is better)
Translates to: VYHWGCEEPATGPSTGSPVRERK*SRDQSA
Trigger: CGCACTCTGGTCCCTGCTGCACTTCCGTTCCCTCAC...AGGACTGCCTGTGGAAGGCCCCGTTGCAGGCTCCTCACAACCCCAGTGGTAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp GTGCTGCCTTGCAGGGGAGCGGTGCTTGGCGATTGCTCCAGTCTAGCTTCAAGCTGCACGCGGCTGGAGTaGCAGCAGATGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VLPCRGAVLGDCSSLASSCTRLE*QQMERL
Trigger: CAGCCTCTCCATCTGCTGGCACTCCAGCCGCGTGCA...GCTTGAAGCTAGACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAGGCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp AGCCCTGAGCAGGTACAGTCACGGACACCCACCCAGGTCGCTTGGCCAGAAAGCTCAATGCTGCACACCTaGACGCGGCTGGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SPEQVQSRTPTQVAWPESSMLHT*TRLECQ
Trigger: CTGGCACTCCAGCCGCGTGCAGGTGTGCAGCATTGA...GCTTTCTGGCCAAGCGACCTGGGTGGGTGTCCGTGACTGTACCTGCTCAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp GCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGCGCCCATCACAGTGCTCCTTTCTACAATCGCGAGTaGGGTCACTGCGGGAACGCA +
Preference number: 4 (lower is better)
Translates to: AAGAGWSRSVNSAHHSAPFYNRE*GHCGNA
Trigger: TGCGTTCCCGCAGTGACCGCACTCGCGATTGTAGAA...AGGAGCACTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCAAGCATGGCGGCGCTGTaGTCTGCCCGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLRICGGGLKVEELGSKPSMAAL*SARRAR
Trigger: CCTGGCCCTGCGGGCAGAGCACAGCGCCGCCATGCT...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CCA 90 bp AGCCCTGAGCAGGTACAGTCACGGACACCCACCCAGGTCGCTTGGCCAGAAAGCCAACCCTCAAGGCGGTaGGGGCACGCGTTAGCATTG +
Preference number: 4 (lower is better)
Translates to: SPEQVQSRTPTQVAWPESQPSRR*GHALAL
Trigger: CAATGCTAACGCGTGCCCCCACCGCCTTGAGGGTTG...GCTTTCTGGCCAAGCGACCTGGGTGGGTGTCCGTGACTGTACCTGCTCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp CCGGCCCAGCAGAGTCCTGGGGCGGCTGTGGACAGAGGGAATGCCGGTTCCAGGAGGGATTTGTTTCCTTaGAGGTGGCCTAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: PAQQSPGAAVDRGNAGSRRDLFP*RWPSDR
Trigger: CCTGTCACTAGGCCACCTCCAAGGAAACAAATCCCT...CCTGGAACCGGCATTCCCTCTGTCCACAGCCGCCCCAGGACTCTGCTGGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCAGTGCGCGCAGGCGTaGGCAGCAGCGCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: MRLRICGGGLKVEELGSKQCAQA*AAAQQA
Trigger: CGCCTGCTGCGCTGCTGCCCACGCCTGCGCGCACTG...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
3UTR CAA 72 bp GCCAGGTGTCACACCGAGCCCGGGCCTCCTTCAGGTTaGTGTGCCCTCATTAGTCACCCCGTCAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: ARCHTEPGPPSG*CALISHPVNLC
Trigger: GCAGAGGTTGACGGGGTGACTAATGAGGGCACACAAACCTGAAGGAGGCCCGGGCTCGGTGTGACACCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp GTCTACCACTGGGGTTGTGAGGAGCCTGCAACGGGGCCTTCCACAGGCAGTCCTCCATTCCTCCCGACCTaGGCTGAGTGCCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VYHWGCEEPATGPSTGSPPFLPT*AECQKN
Trigger: GTTCTTCTGGCACTCAGCTCAGGTCGGGAGGAATGG...AGGACTGCCTGTGGAAGGCCCCGTTGCAGGCTCCTCACAACCCCAGTGGTAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp CCGCCCCATGGGACCGAGTGGACTCATTTACCGAGGAGGACTCGGGCCCTGCGACCCCAGTTTTGTACATaGAGAAACTGGCTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PPHGTEWTHLPRRTRALRPQFCT*RNWLRQ
Trigger: CTGCCGGAGCCAGTTTCTTCATGTACAAAACTGGGG...TCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGGTCCCATGGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp AGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGAGGAAGGAGAAGAGGTaGAGCAGGCACTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: RGKGLCRSWRWVEPECEQRKEKR*SRHSRL
Trigger: CAACCGGGAGTGCCTGCTGCACCTCTTCTCCTTCCT...CTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp GCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGCGCCCATCACAGTGCTCCTTGGCAAGGCTCTTCCTaGTGTCCTTGTCTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AAGAGWSRSVNSAHHSAPWQGSS*CPCLGR
Trigger: CCTTCCTAGACAAGGACAGCAGGAAGAGCCTTGCCA...AGGAGCACTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp ACCCTCAAGGCGGTGGGGGCACGCGTTAGCATTGAGTCCGGGTTCAGCTTAGTAGCCAGTCCTCAATGCTaGACACCTGCACGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: TLKAVGARVSIESGFSLVASPQC*TPARGW
Trigger: CCAGCCGCGTGCAGGTGTGCAGCATTGAGGACTGGC...TACTAAGCTGAACCCGGACTCAATGCTAACGCGTGCCCCCACCGCCTTGAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp GCTCTGGATGTGCTGCCTTGCAGGGGAGCGGTGCTTGGCGATTGCTCCAGTCTAGGCTCTCGTGCCGGCTaGAGATGCTTCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ALDVLPCRGAVLGDCSSLGSRAG*RCFSGR
Trigger: CCTTCCAGAGAAGCATCTGCAGCCGGCACGAGAGCC...TAGACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAGGCAGCACATCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp ACTCCGAGTGGTCAGGTCCTCCCCACCGAGGTGATTTCGGTCCAACGGCGATCGTGCTTCCCCTCCTCCTaGTTCACCGAGATCACCACC +
Preference number: 4 (lower is better)
Translates to: TPSGQVLPTEVISVQRRSCFPSS*FTEITT
Trigger: GGTGGTGATCTCGGTGAAGCAGGAGGAGGGGAAGCA...CGATCGCCGTTGGACCGAAATCACCTCGGTGGGGAGGACCTGACCACTCGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS-3UTR GCA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCAGTTCTCCAGGCGCAGTaGGCGCAGGCGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RLRICGGGLKVEELGSKPVLQAQ*AQAWAA
Trigger: TGCTGCCCACGCCTGCGCGCACTGCGCCTGGAGAAC...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCATCCACGTGCAATGTCTaGAGCGCGCGCCCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: RLRICGGGLKVEELGSKPSTCNV*SARPSA
Trigger: GGCGGACGGGCGCGCGCTGCAGACATTGCACGTGGA...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp ACTGTGCAGACGGGGAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGAGCATGGCGGCGCTGTaGTCTGCCCGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TVQTGKMRLRICGGGLKVSMAAL*SARRAR
Trigger: CCTGGCCCTGCGGGCAGAGCACAGCGCCGCCATGCT...CACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTCCCCGTCTGCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CCA 90 bp GGAGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACGTGCATGGTGAGCAGTaGCCACATGTGAGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GGVKGFVAAGAGWSRSVNVHGEQ*PHVSAA
Trigger: AGCTGCACTCACATGTGGCCACTGCTCACCATGCAC...GTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp CGGAGTGTGAACAGCGCCCATCACAGTGCTCCTCGCCTCTTCCACCCACCCAGATCCTCAAACACGTCGTaGAGCTGGGAGCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RSVNSAHHSAPRLFHPPRSSNTS*SWEQVL
Trigger: CAGGACCTGCTCCCAGCTCCACGACGTGTTTGAGGA...TCTGGGTGGGTGGAAGAGGCGAGGAGCACTGTGATGGGCGCTGTTCACACTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp GCAGTCCTAACCCGCTTTCCCTGGAAACAAACGGGACCAGCCTGCTTCCAGTCCTGGAGTGCCAGCAGATaGAGAGGCTGCGGAGTGCCG +
Preference number: 4 (lower is better)
Translates to: AVLTRFPWKQTGPACFQSWSASR*RGCGVP
Trigger: CGGCACTCCGCAGCCTCTCCATCTGCTGGCACTCCA...GGACTGGAAGCAGGCTGGTCCCGTTTGTTTCCAGGGAAAGCGGGTTAGGACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp AGCCCTGAGCAGGTACAGTCACGGACACCCACCCAGGTCGCTTGGCCAGAAAGCTCCAAGTCGGCTTTCTaGCCGGCCCATTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SPEQVQSRTPTQVAWPESSKSAF*PAHFPS
Trigger: GGAGGGAAAATGGGCCGGCCAGAAAGCCGACTTGGA...GCTTTCTGGCCAAGCGACCTGGGTGGGTGTCCGTGACTGTACCTGCTCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp CTAGAGGCAAGCCCTGAGCAGGTACAGTCACGGACACCCACCCAGGTCGCTTGGTCTGGAAGGCACTCTTaGGCCAGTCCTCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: LEASPEQVQSRTPTQVAWSGRHS*ASPQCC
Trigger: GCAGCATTGAGGACTGGCTCAAGAGTGCCTTCCAGA...CCAAGCGACCTGGGTGGGTGTCCGTGACTGTACCTGCTCAGGGCTTGCCTCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp ACCCTCAAGGCGGTGGGGGCACGCGTTAGCATTGAGTCCGGGTTCAGCTTAGTAGGAGGAGGAAATCATTaGCCAGGCTCTCGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: TLKAVGARVSIESGFSLVGGGNH*PGSRAG
Trigger: GCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCC...TACTAAGCTGAACCCGGACTCAATGCTAACGCGTGCCCCCACCGCCTTGAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp CATGGGACCGAGTGGACTCATTTACCGAGGAGGACTCGGGCCCTGCGAGGTGAAAGGAAGGAGAAGAGGTaGAGCAGGCACTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: HGTEWTHLPRRTRALRGERKEKR*SRHSRL
Trigger: CAACCGGGAGTGCCTGCTGCACCTCTTCTCCTTCCT...TTCACCTCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGGTCCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp GAGTGTGAACAGCGCCCATCACAGTGCTCCTCGCCTCTTCCACCCACCCAGAATCAGCAGGGACCAGAGTaGGGGGTCCTCAAACACGTC +
Preference number: 4 (lower is better)
Translates to: ECEQRPSQCSSPLPPTQNQQGPE*GVLKHV
Trigger: GACGTGTTTGAGGACCCCGCACTCTGGTCCCTGCTG...ATTCTGGGTGGGTGGAAGAGGCGAGGAGCACTGTGATGGGCGCTGTTCACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp AAGGAACTTAAATATGTTGGGTGCAGCCAGGTGTCACACCGAGCCCGGGCCTCCTCGCTCTGGATGTGCTaGCTTGCAGGGGAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: KELKYVGCSQVSHRARASSLWMC*LAGERC
Trigger: GCACCGCTCCCCTGCAAGGCAGCACATCCAGAGCGA...GGAGGCCCGGGCTCGGTGTGACACCTGGCTGCACCCAACATATTTAAGTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp ACTGTGCAGACGGGGAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGTTCTCCAGGCGCAGTaGGCGCAGGCGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TVQTGKMRLRICGGGLKVVLQAQ*AQAWAA
Trigger: TGCTGCCCACGCCTGCGCGCACTGCGCCTGGAGAAC...CACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTCCCCGTCTGCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp AAGGAACTTAAATATGTTGGGTGCAGCCAGGTGTCACACCGAGCCCGGGCCTCCCGGCAGAAGTCCACGTaGAATGTCTGCAGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: KELKYVGCSQVSHRARASRQKST*NVCSAR
Trigger: GCGCGCGCTGCAGACATTGCACGTGGACTTCTGCCG...GGAGGCCCGGGCTCGGTGTGACACCTGGCTGCACCCAACATATTTAAGTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp AAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGCGCCCATTGAGCCACCGCACCTaGCCCTTCTACCCTCTTATA +
Preference number: 4 (lower is better)
Translates to: KGLCRSWRWVEPECEQRPLSHRT*PFYPLI
Trigger: TATAAGAGGGTAGAAGGGCCAGGTGCGGTGGCTCAA...TGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp CATGGGACCGAGTGGACTCATTTACCGAGGAGGACTCGGGCCCTGCGAGGTGAACCCCATGGGACCGAGTaGACTCATTTACCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HGTEWTHLPRRTRALRGEPHGTE*THLPRR
Trigger: CCTCCTCGGTAAATGAGTCCACTCGGTCCCATGGGG...TTCACCTCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGGTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp GAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGCTGGTCGGGCAGCATaGCGGCGCTGTGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ENEAQNMRWWSEGGRAGFAGRAA*RRCALP
Trigger: GGGCAGAGCACAGCGCCGCCATGCTGCCCGACCAGC...GAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
3UTR CAA 72 bp GGATGTGCTGCCTTGCAGGGGAGCGGTGCTTGGCGATaGCTCCAGTCTAGCTTCAAGCTGAGGCCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: GCAALQGSGAWR*LQSSFKLRPLN
Trigger: ATTCAGGGGCCTCAGCTTGAAGCTAGACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAGGCAGCACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp AGTGACAGGCCCATCCCAACCCTCAAGGCGGTGGGGGCACGCGTTAGCATTGAGAGGAGCCACAACCCTTaGCTCTTTGTTTCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SDRPIPTLKAVGARVSIERSHNP*LFVSLW
Trigger: CCAGAGCGAAACAAAGAGTCAAGGGTTGTGGCTCCT...CTCAATGCTAACGCGTGCCCCCACCGCCTTGAGGGTTGGGATGGGCCTGTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCATCGGGCCCTGCGAGGTaGAGACACTTGGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: RLRICGGGLKVEELGSKPSGPAR*RHLAAM
Trigger: CATCGCAGCCAAGTGTCTTCACCTCGCAGGGCCCGA...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp TCAGGTTTGTGTGCCCTCATTAGTCACCCCGTCAACCTCTGCACCCCCAGTTTTGTGAGGAGAGTGCGGTaGCCCGGGGCTCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: SGLCALISHPVNLCTPSFVRRVR*PGAHWL
Trigger: AAGCCAGTGAGCCCCGGGTCACCGCACTCTCCTCAC...AAAACTGGGGGTGCAGAGGTTGACGGGGTGACTAATGAGGGCACACAAACCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGGGAGAGGCTGCGGAGTaGCGGGCCCAGGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: MRLRICGGGLKVEELGSKGEAAE*RAQEEV
Trigger: AACTTCCTCCTGGGCCCGGCACTCCGCAGCCTCTCC...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp GCAGTCCTAACCCGCTTTCCCTGGAAACAAACGGGACCAGCCTGCTTCCAGTCCTTGACCAGGCTCTCGTaGCGGCTGCAGATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: AVLTRFPWKQTGPACFQSLTRLS*RLQMLL
Trigger: GAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAA...GGACTGGAAGCAGGCTGGTCCCGTTTGTTTCCAGGGAAAGCGGGTTAGGACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp GGAGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACGGAAGCCTAGGCTTGTaGTCATGTCCAGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: GGVKGFVAAGAGWSRSVNGSLGL*SCPANP
Trigger: TGGATTTGCTGGACATGAGCACAAGCCTAGGCTTCC...GTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp AGCCCTGAGCAGGTACAGTCACGGACACCCACCCAGGTCGCTTGGCCAGAAAGCGTGAAGACACTTGGCTaGGATGACACTGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: SPEQVQSRTPTQVAWPESVKTLG*DDTAGF
Trigger: GAACCCTGCAGTGTCATCGCAGCCAAGTGTCTTCAC...GCTTTCTGGCCAAGCGACCTGGGTGGGTGTCCGTGACTGTACCTGCTCAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp AGACACTTGGCTGCGATGACACTGCAGGGTTCCAAGTCGGCTTTCTGGCCGGCCCACTCCCGGTTGAGCTaGGTTATGTGCATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RHLAAMTLQGSKSAFWPAHSRLS*VMCMVS
Trigger: GCTCACCATGCACATAACCCAGCTCAACCGGGAGTG...GGCCGGCCAGAAAGCCGACTTGGAACCCTGCAGTGTCATCGCAGCCAAGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp GTTAAAGCTACCCAACCGCCCCATGGGACCGAGTGGACTCATTTACCGAGGAGGAACACGTCGTGGAGCTaGGAGCAGGTCCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: VKATQPPHGTEWTHLPRRNTSWS*EQVLAR
Trigger: CCTTGCCAGGACCTGCTCCCAGCTCCACGACGTGTT...CCTCCTCGGTAAATGAGTCCACTCGGTCCCATGGGGCGGTTGGGTAGCTTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp AAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGCGCCCAAGGAAGTTGTCCTTCTaGAGTTCAGTGAGGGAACGG +
Preference number: 4 (lower is better)
Translates to: KGLCRSWRWVEPECEQRPRKLSF*SSVRER
Trigger: CCGTTCCCTCACTGAACTCCAGAAGGACAACTTCCT...TGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp GTTAAAGCTACCCAACCGCCCCATGGGACCGAGTGGACTCATTTACCGAGGAGGCAGGGGAGCGGTGCTTaGCGATTGCTCCAGTCTAGC +
Preference number: 4 (lower is better)
Translates to: VKATQPPHGTEWTHLPRRQGSGA*RLLQSS
Trigger: GCTAGACTGGAGCAATCGCCAAGCACCGCTCCCCTG...CCTCCTCGGTAAATGAGTCCACTCGGTCCCATGGGGCGGTTGGGTAGCTTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp GCTCTGGATGTGCTGCCTTGCAGGGGAGCGGTGCTTGGCGATTGCTCCAGTCTATACCCAACCGCCCCATaGGACCGAGTGGACTCATTT +
Preference number: 4 (lower is better)
Translates to: ALDVLPCRGAVLGDCSSLYPTAP*DRVDSF
Trigger: AAATGAGTCCACTCGGTCCCATGGGGCGGTTGGGTA...TAGACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAGGCAGCACATCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCAGTCGTCGGTAACGTaGCCGCAGCCCGAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: MRLRICGGGLKVEELGSKQSSVT*PQPESV
Trigger: CACGCTCTCGGGCTGCGGCCACGTTACCGACGACTG...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR TCA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCAGGAGGAGGAAATCATTaGCCAGGCTCTCGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RLRICGGGLKVEELGSKPGGGNH*PGSRAG
Trigger: GCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCC...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR TCA 90 bp GCTCTGGATGTGCTGCCTTGCAGGGGAGCGGTGCTTGGCGATTGCTCCAGTCTACAGGTGACTGGCTGGTaGCTTATTTGCTGTCAGACC +
Preference number: 4 (lower is better)
Translates to: ALDVLPCRGAVLGDCSSLQVTGW*LICCQT
Trigger: GGTCTGACAGCAAATAAGTCACCAGCCAGTCACCTG...TAGACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAGGCAGCACATCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp GTACATGAAGAAACTGGCTCCGGCAGCTCAGGTGACTGGCTGGTGACTTATTTGCTACCACTGGGGTTGTaGGGAGCCTGCAACGGGGCC +
Preference number: 4 (lower is better)
Translates to: VHEETGSGSSGDWLVTYLLPLGL*GACNGA
Trigger: GGCCCCGTTGCAGGCTCCTCACAACCCCAGTGGTAG...CAAATAAGTCACCAGCCAGTCACCTGAGCTGCCGGAGCCAGTTTCTTCATGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp GAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCCCAACGTGCGGTTGGTaGCGCGCGCGCAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ENEAQNMRWWSEGGRAGFPTCGW*RARSSP
Trigger: TGGAGAACTGCGCGCGCGTCACCAACCGCACGTTGG...GAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR TCA 90 bp CATGGGACCGAGTGGACTCATTTACCGAGGAGGACTCGGGCCCTGCGAGGTGAATGCAGACGGGGAAAATaGGGCTCAGAATATGCGGTG +
Preference number: 4 (lower is better)
Translates to: HGTEWTHLPRRTRALRGECRRGK*GSEYAV
Trigger: CACCGCATATTCTGAGCCTCATTTTCCCCGTCTGCA...TTCACCTCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGGTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp AATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGGAGAGGCTGCGGAGTaGCGGGCCCAGGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: NEAQNMRWWSEGGRAGFEGEAAE*RAQEEV
Trigger: AACTTCCTCCTGGGCCCGGCACTCCGCAGCCTCTCC...TTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCATCAATGCTGCACACCTaGACGCGGCTGGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RLRICGGGLKVEELGSKPSMLHT*TRLECQ
Trigger: CTGGCACTCCAGCCGCGTGCAGGTGTGCAGCATTGA...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGGCCAGTCCTCAATGCTaGACACCTGCACGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: MRLRICGGGLKVEELGSKASPQC*TPARGW
Trigger: CCAGCCGCGTGCAGGTGTGCAGCATTGAGGACTGGC...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp ACTGTGCAGACGGGGAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGAGCGGACTGTCCCCCTaGCCAGCCATCCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: TVQTGKMRLRICGGGLKVSGLSP*PAILSH
Trigger: ATGGCTGAGGATGGCTGGGCAGGGGGACAGTCCGCT...CACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTCCCCGTCTGCACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp AATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCGTTTCCCTTTCCCTaGCAGCCTCCCCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NEAQNMRWWSEGGRAGFEAFPFP*QPPPQL
Trigger: GAGCTGCGGGGGAGGCTGGCAGGGAAAGGGAAACGC...TTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp GCAGTCCTAACCCGCTTTCCCTGGAAACAAACGGGACCAGCCTGCTTCCAGTCCTGTGGACAGAGGGAATaGCGGTTCCAGGAGCCACAA +
Preference number: 4 (lower is better)
Translates to: AVLTRFPWKQTGPACFQSCGQRE*RFQEPQ
Trigger: TTGTGGCTCCTGGAACCGGCATTCCCTCTGTCCACA...GGACTGGAAGCAGGCTGGTCCCGTTTGTTTCCAGGGAAAGCGGGTTAGGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCGGCAGAAGTCCACGTaGAATGTCTGCAGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: MRLRICGGGLKVEELGSKRQKST*NVCSAR
Trigger: GCGCGCGCTGCAGACATTGCACGTGGACTTCTGCCG...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp AATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAACGGCCGCGCTCACGTTaGGGCAGAAGTCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: NEAQNMRWWSEGGRAGFERPRSR*GRSPRA
Trigger: TGCACGTGGACTTCTGCCGCAACGTGAGCGCGGCCG...TTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CCA 90 bp GAGTGTGAACAGCGCCCATCACAGTGCTCCTCGCCTCTTCCACCCACCCAGAATCACTCCCGGTTGAGCTaGGTTATGTGCATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: ECEQRPSQCSSPLPPTQNHSRLS*VMCMVS
Trigger: GCTCACCATGCACATAACCCAGCTCAACCGGGAGTG...ATTCTGGGTGGGTGGAAGAGGCGAGGAGCACTGTGATGGGCGCTGTTCACACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCAAACACGTCGTGGAGCTaGGAGCAGGTCCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: RLRICGGGLKVEELGSKPNTSWS*EQVLAR
Trigger: CCTTGCCAGGACCTGCTCCCAGCTCCACGACGTGTT...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CCA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCAACACCTGCACGCGGCTaGAGTGCCAGCAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: RLRICGGGLKVEELGSKPTPARG*SASRWR
Trigger: TCTCCATCTGCTGGCACTCCAGCCGCGTGCAGGTGT...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CCA 90 bp GTGCTGCCTTGCAGGGGAGCGGTGCTTGGCGATTGCTCCAGTCTAGCTTCAAGCGGCAGCTCAGGTGACTaGCTGGTGACTTATTTGCTG +
Preference number: 4 (lower is better)
Translates to: VLPCRGAVLGDCSSLASSGSSGD*LVTYLL
Trigger: CAGCAAATAAGTCACCAGCCAGTCACCTGAGCTGCC...GCTTGAAGCTAGACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAGGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp ACCCTCAAGGCGGTGGGGGCACGCGTTAGCATTGAGTCCGGGTTCAGCTTAGTATGGCAAGGCTCTTCCTaGTGTCCTTGTCTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TLKAVGARVSIESGFSLVWQGSS*CPCLGR
Trigger: CCTTCCTAGACAAGGACAGCAGGAAGAGCCTTGCCA...TACTAAGCTGAACCCGGACTCAATGCTAACGCGTGCCCCCACCGCCTTGAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCAGCAGGGACCAGAGTaGGGGGTCCTCAAACACGTC +
Preference number: 4 (lower is better)
Translates to: MRLRICGGGLKVEELGSKQQGPE*GVLKHV
Trigger: GACGTGTTTGAGGACCCCGCACTCTGGTCCCTGCTG...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp AATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAATGCACGCGGCTGGAGTaGCAGCAGATGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NEAQNMRWWSEGGRAGFECTRLE*QQMERL
Trigger: CAGCCTCTCCATCTGCTGGCACTCCAGCCGCGTGCA...TTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp ACTGTGCAGACGGGGAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGGCTCTCGTGCCGGCTaGAGATGCTTCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: TVQTGKMRLRICGGGLKVGSRAG*RCFSGR
Trigger: CCTTCCAGAGAAGCATCTGCAGCCGGCACGAGAGCC...CACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTCCCCGTCTGCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp TGGCCCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAGGCTCCTTCTGCCCGTaGGCCCCTGCTTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: WPFYPLIYQLPVVSSPTRGSFCP*APASPP
Trigger: AGGAGGGGAAGCAGGGGCGCACGGGCAGAAGGAGCC...TCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp CTAGAGGCAAGCCCTGAGCAGGTACAGTCACGGACACCCACCCAGGTCGCTTGGCTTAAATATGTTGGGTaGAGCCAGGTGTCACACCGA +
Preference number: 4 (lower is better)
Translates to: LEASPEQVQSRTPTQVAWLKYVG*SQVSHR
Trigger: TCGGTGTGACACCTGGCTGCACCCAACATATTTAAG...CCAAGCGACCTGGGTGGGTGTCCGTGACTGTACCTGCTCAGGGCTTGCCTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp TCAGGTTTGTGTGCCCTCATTAGTCACCCCGTCAACCTCTGCACCCCCAGTTTTCTTGCAGGGGAGCGGTaGTTGGCGATTGCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: SGLCALISHPVNLCTPSFLAGER*LAIAPV
Trigger: GACTGGAGCAATCGCCAAGCACCGCTCCCCTGCAAG...AAAACTGGGGGTGCAGAGGTTGACGGGGTGACTAATGAGGGCACACAAACCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp TCAGGTTTGTGTGCCCTCATTAGTCACCCCGTCAACCTCTGCACCCCCAGTTTTGTTTCGCTCTGGATGTaGTGCCTTGCAGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SGLCALISHPVNLCTPSFVSLWM*CLAGER
Trigger: CCGCTCCCCTGCAAGGCAGCACATCCAGAGCGAAAC...AAAACTGGGGGTGCAGAGGTTGACGGGGTGACTAATGAGGGCACACAAACCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCATCCTCAAACACGTCGTaGAGCTGGGAGCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RLRICGGGLKVEELGSKPSSNTS*SWEQVL
Trigger: CAGGACCTGCTCCCAGCTCCACGACGTGTTTGAGGA...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CCA 90 bp GAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCTGGAGTGCCAGCAGATaGAGAGGCTGCGGAGTGCCG +
Preference number: 4 (lower is better)
Translates to: ENEAQNMRWWSEGGRAGFWSASR*RGCGVP
Trigger: CGGCACTCCGCAGCCTCTCCATCTGCTGGCACTCCA...GAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CCA 90 bp CCGAGAGCCTTCACTAAATGTGACACATCAGTGACTACAGCCCTGAAATTCAAACCGCCCCAGGAAAGGTaGGCGGGCAGACGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: PRAFTKCDTSVTTALKFKPPQER*AGRRAC
Trigger: GCACGCGCGTCTGCCCGCCCACCTTTCCTGGGGCGG...TTTGAATTTCAGGGCTGTAGTCACTGATGTGTCACATTTAGTGAAGGCTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp GAGTGTGAACAGCGCCCATCACAGTGCTCCTCGCCTCTTCCACCCACCCAGAATGTGAATCGCCCATCTTaGCCTCCTAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ECEQRPSQCSSPLPPTQNVNRPS*PPKVLG
Trigger: TCCCAGCACTTTAGGAGGCCAAGATGGGCGATTCAC...ATTCTGGGTGGGTGGAAGAGGCGAGGAGCACTGTGATGGGCGCTGTTCACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp GTACATGAAGAAACTGGCTCCGGCAGCTCAGGTGACTGGCTGGTGACTTATTTGGTCCTGGGGCGGCTGTaGACAGAGGGAATGCCGGTT +
Preference number: 4 (lower is better)
Translates to: VHEETGSGSSGDWLVTYLVLGRL*TEGMPV
Trigger: AACCGGCATTCCCTCTGTCCACAGCCGCCCCAGGAC...CAAATAAGTCACCAGCCAGTCACCTGAGCTGCCGGAGCCAGTTTCTTCATGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CAA 72 bp GGCTCCGGCAGCTCAGGTGACTGGCTGGTGACTTATTaGCTGTCAGACCCAGGACAGATGTCTGAACCTTGC +
Preference number: 4 (lower is better)
Translates to: GSGSSGDWLVTY*LSDPGQMSEPC
Trigger: GCAAGGTTCAGACATCTGTCCTGGGTCTGACAGCAAATAAGTCACCAGCCAGTCACCTGAGCTGCCGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CAA 72 bp TTGTGCCAGGGGAGGGAAGTAAGGAACTTAAATATGTaGGGTGCAGCCAGGTGTCACACCGAGCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: LCQGREVRNLNM*GAARCHTEPGP
Trigger: AGGCCCGGGCTCGGTGTGACACCTGGCTGCACCCAACATATTTAAGTTCCTTACTTCCCTCCCCTGGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCAGGGTTATGTGCATGGTaGGCAGTGGCCACATGTGAG +
Preference number: 4 (lower is better)
Translates to: RLRICGGGLKVEELGSKPGLCAW*AVATCE
Trigger: CTCACATGTGGCCACTGCTCACCATGCACATAACCC...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638704.2
CDS-3UTR GCA 90 bp AATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAACAGCAGGGACCAGAGTaGGGGGTCCTCAAACACGTC +
Preference number: 4 (lower is better)
Translates to: NEAQNMRWWSEGGRAGFEQQGPE*GVLKHV
Trigger: GACGTGTTTGAGGACCCCGCACTCTGGTCCCTGCTG...TTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp AATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGTGAGGGAACGGAAGTaGAGCAGGGACCAGAGTGCG +
Preference number: 4 (lower is better)
Translates to: NEAQNMRWWSEGGRAGFEVRERK*SRDQSA
Trigger: CGCACTCTGGTCCCTGCTGCACTTCCGTTCCCTCAC...TTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp ACTGTGCAGACGGGGAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGTTGACCAGGCTCTCGTaGCGGCTGCAGATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TVQTGKMRLRICGGGLKVLTRLS*RLQMLL
Trigger: GAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAA...CACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTCCCCGTCTGCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp CCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAGGTCTGCCCGTGCGCCCCTaGTTCCCCTCCTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PSTLLYTSYLLSLPPLEGLPVRP*FPSSCF
Trigger: GAAGCAGGAGGAGGGGAAGCAGGGGCGCACGGGCAG...ACCTTCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp CATGGGACCGAGTGGACTCATTTACCGAGGAGGACTCGGGCCCTGCGAGGTGAATCAGTACCTACTATGTaGCAGGTGCCACTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: HGTEWTHLPRRTRALRGESVPTM*QVPLCH
Trigger: ATGACACAGTGGCACCTGGCACATAGTAGGTACTGA...TTCACCTCGCAGGGCCCGAGTCCTCCTCGGTAAATGAGTCCACTCGGTCCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCACACTCCCGGTTGAGCTaGGTTATGTGCATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RLRICGGGLKVEELGSKPHSRLS*VMCMVS
Trigger: GCTCACCATGCACATAACCCAGCTCAACCGGGAGTG...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CCA 90 bp CCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAGGTCGCCTCCCGCCTCCGTaGGGAGCGCACAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PSTLLYTSYLLSLPPLEGRLPPP*GAHSRK
Trigger: CTTTCTGCTGTGCGCTCCCCACGGAGGCGGGAGGCG...ACCTTCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp TACAGCCCTGAAATTCAAATTGGAAGCCTAGGCTTGTGCTCATGTCCAGCAAATCACCACCGGGGCTCCTaGAGGTGGCGGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: YSPEIQIGSLGLCSCPANHHRGS*RWRSPG
Trigger: TCCTGGGGACCGCCACCTCCAGGAGCCCCGGTGGTG...ATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAATTTGAATTTCAGGGCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp CTAGGCTTGTGCTCATGTCCAGCAAATCCAACAGGTGAAAAATCTAGCTTGTCAGGAGGAGCGGCTCGGTaGCTCCTTCTGCCCGTGCGC +
Preference number: 4 (lower is better)
Translates to: LGLCSCPANPTGEKSSLSGGAAR*LLLPVR
Trigger: GCGCACGGGCAGAAGGAGCCACCGAGCCGCTCCTCC...TGACAAGCTAGATTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp GAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCCCTGGGCCACCAGCCTaGAAAAGGGTAGGGTTCGGA +
Preference number: 4 (lower is better)
Translates to: ENEAQNMRWWSEGGRAGFPGPPA*KRVGFG
Trigger: TCCGAACCCTACCCTTTTCCAGGCTGGTGGCCCAGG...GAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCTTCTGGAGTTCAGTaGGGGAACGGAAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: MRLRICGGGLKVEELGSKPSGVQ*GNGSAA
Trigger: TGCTGCACTTCCGTTCCCTCACTGAACTCCAGAAGG...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp AATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAAGGAAGGAGAAGAGGTaGAGCAGGCACTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: NEAQNMRWWSEGGRAGFERKEKR*SRHSRL
Trigger: CAACCGGGAGTGCCTGCTGCACCTCTTCTCCTTCCT...TTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp CAAATTGGAAGCCTAGGCTTGTGCTCATGTCCAGCAAATCCAACAGGTGAAAAACGCGAGTGCGGTCACTaGGGGAACGCATCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: QIGSLGLCSCPANPTGEKRECGH*GNASAP
Trigger: TGGGGCGGATGCGTTCCCGCAGTGACCGCACTCGCG...TTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp GTACATGAAGAAACTGGCTCCGGCAGCTCAGGTGACTGGCTGGTGACTTATTTGCAAACGGGACCAGCCTaGTTCCAGTCCAGAAGGACC +
Preference number: 4 (lower is better)
Translates to: VHEETGSGSSGDWLVTYLQTGPA*FQSRRT
Trigger: GGTCCTTCTGGACTGGAAGCAGGCTGGTCCCGTTTG...CAAATAAGTCACCAGCCAGTCACCTGAGCTGCCGGAGCCAGTTTCTTCATGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp GAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCTCCTCAAACACGTCGTaGAGCTGGGAGCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: ENEAQNMRWWSEGGRAGFSSNTS*SWEQVL
Trigger: CAGGACCTGCTCCCAGCTCCACGACGTGTTTGAGGA...GAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CCA 90 bp GGAGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACCTTAGCCAGGGCTGCTaGTTTTGTTTTTGTTTAGTT +
Preference number: 4 (lower is better)
Translates to: GGVKGFVAAGAGWSRSVNLSQGC*FCFCLV
Trigger: AACTAAACAAAAACAAAACCAGCAGCCCTGGCTAAG...GTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp CAAATTGGAAGCCTAGGCTTGTGCTCATGTCCAGCAAATCCAACAGGTGAAAAAGGGCTTTGTCGCAGCTaGCGCTGGGTGGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: QIGSLGLCSCPANPTGEKGLCRS*RWVEPE
Trigger: CTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCC...TTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR CAA 72 bp TCATTAGTCACCCCGTCAACCTCTGCACCCCCAGTTTaGTACATGAAGAAACTGGCTCCGGCAGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLVTPSTSAPPV*YMKKLAPAAQV
Trigger: CACCTGAGCTGCCGGAGCCAGTTTCTTCATGTACAAAACTGGGGGTGCAGAGGTTGACGGGGTGACTAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp GAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCTCTGGAAGGCACTCTTaGGCCAGTCCTCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: ENEAQNMRWWSEGGRAGFSGRHS*ASPQCC
Trigger: GCAGCATTGAGGACTGGCTCAAGAGTGCCTTCCAGA...GAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR TCA 90 bp CGGAGTGTGAACAGCGCCCATCACAGTGCTCCTCGCCTCTTCCACCCACCCAGATCCCTATTTGAGCAATaGATTAAGGAACCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: RSVNSAHHSAPRLFHPPRSLFEQ*IKEPVS
Trigger: ACTCACAGGTTCCTTAATTCATTGCTCAAATAGGGA...TCTGGGTGGGTGGAAGAGGCGAGGAGCACTGTGATGGGCGCTGTTCACACTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR TCA 90 bp GTACATGAAGAAACTGGCTCCGGCAGCTCAGGTGACTGGCTGGTGACTTATTTGCTCCGGCAGCTCAGGTaGCTGGCTGGTGACTTATTT +
Preference number: 4 (lower is better)
Translates to: VHEETGSGSSGDWLVTYLLRQLR*LAGDLF
Trigger: AAATAAGTCACCAGCCAGTCACCTGAGCTGCCGGAG...CAAATAAGTCACCAGCCAGTCACCTGAGCTGCCGGAGCCAGTTTCTTCATGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp GTACATGAAGAAACTGGCTCCGGCAGCTCAGGTGACTGGCTGGTGACTTATTTGTATGCGGTGGTGGTCTaGAGGTGGAAGAGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VHEETGSGSSGDWLVTYLYAVVV*RWKSWV
Trigger: AACCCAGCTCTTCCACCTTCAGACCACCACCGCATA...CAAATAAGTCACCAGCCAGTCACCTGAGCTGCCGGAGCCAGTTTCTTCATGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp GAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCTATGCGGTGGTGGTCTaGAGGTGGAAGAGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: ENEAQNMRWWSEGGRAGFYAVVV*RWKSWV
Trigger: AACCCAGCTCTTCCACCTTCAGACCACCACCGCATA...GAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR TCA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGTGCAGACGGGGAAAATaGGGCTCAGAATATGCGGTG +
Preference number: 4 (lower is better)
Translates to: MRLRICGGGLKVEELGSKCRRGK*GSEYAV
Trigger: CACCGCATATTCTGAGCCTCATTTTCCCCGTCTGCA...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGTGGCAAGGCTCTTCCTaGTGTCCTTGTCTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: MRLRICGGGLKVEELGSKWQGSS*CPCLGR
Trigger: CCTTCCTAGACAAGGACAGCAGGAAGAGCCTTGCCA...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR GCA 90 bp CCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAGGTTGCACGCGGCTGGAGTaGCAGCAGATGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PSTLLYTSYLLSLPPLEGCTRLE*QQMERL
Trigger: CAGCCTCTCCATCTGCTGGCACTCCAGCCGCGTGCA...ACCTTCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp TGGCCCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGATCAATGCTGCACACCTaGACGCGGCTGGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: WPFYPLIYQLPVVSSPTRSMLHT*TRLECQ
Trigger: CTGGCACTCCAGCCGCGTGCAGGTGTGCAGCATTGA...TCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp GAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGCGGTGCTTGGCGATTaGTCCAGTCTAGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: ENEAQNMRWWSEGGRAGFAVLGD*SSLASS
Trigger: GCTTGAAGCTAGACTGGAGCAATCGCCAAGCACCGC...GAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp TGGCCCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAGCTGGGAGCAGGTCCTaGCAAGGCTCTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: WPFYPLIYQLPVVSSPTRAGSRS*QGSSCC
Trigger: ACAGCAGGAAGAGCCTTGCCAGGACCTGCTCCCAGC...TCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp TGGGCGTCACTTCCTCATTTGTCAAGTGGGAGGAATTGTTACCTTCAAGGTGGTACACCTGCACGCGGCTaGAGTGCCAGCAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: WASLPHLSSGRNCYLQGGTPARG*SASRWR
Trigger: TCTCCATCTGCTGGCACTCCAGCCGCGTGCAGGTGT...ACCACCTTGAAGGTAACAATTCCTCCCACTTGACAAATGAGGAAGTGACGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp CCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAGGTTGTCGCAGCTGGCGCTaGGTGGAGCCGGAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: PSTLLYTSYLLSLPPLEGCRSWR*VEPECE
Trigger: TTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACA...ACCTTCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp ACTGTGCAGACGGGGAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGTTGTTTCCTTGGAGGTaGCCTAGTGACAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: TVQTGKMRLRICGGGLKVLFPWR*PSDRPI
Trigger: GATGGGCCTGTCACTAGGCCACCTCCAAGGAAACAA...CACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTCCCCGTCTGCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR TCA 90 bp CCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAGGTGCAGGCACTCCCGGTTaGGCTGGGTTATGTGCATGG +
Preference number: 4 (lower is better)
Translates to: PSTLLYTSYLLSLPPLEGAGTPG*AGLCAW
Trigger: CCATGCACATAACCCAGCTCAACCGGGAGTGCCTGC...ACCTTCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR TCA 90 bp TACAGCCCTGAAATTCAAATTGGAAGCCTAGGCTTGTGCTCATGTCCAGCAAATGGTGGAGCCGGAGTGTaGACAGCGCCCATCACAGTG +
Preference number: 4 (lower is better)
Translates to: YSPEIQIGSLGLCSCPANGGAGV*TAPITV
Trigger: CACTGTGATGGGCGCTGTTCACACTCCGGCTCCACC...ATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAATTTGAATTTCAGGGCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp ACTGTGCAGACGGGGAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGAGGAAGTTGTCCTTCTaGAGTTCAGTGAGGGAACGG +
Preference number: 4 (lower is better)
Translates to: TVQTGKMRLRICGGGLKVRKLSF*SSVRER
Trigger: CCGTTCCCTCACTGAACTCCAGAAGGACAACTTCCT...CACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTCCCCGTCTGCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR TCA 90 bp CCCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAGGCCTTCTGGAGTTCAGTaGGGGAACGGAAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PFYPLIYQLPVVSSPTRRPSGVQ*GNGSAA
Trigger: TGCTGCACTTCCGTTCCCTCACTGAACTCCAGAAGG...CCTTCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR TCA 90 bp CCCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAGGTCTGGAAGGCACTCTTaGGCCAGTCCTCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: PFYPLIYQLPVVSSPTRRSGRHS*ASPQCC
Trigger: GCAGCATTGAGGACTGGCTCAAGAGTGCCTTCCAGA...CCTTCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR TCA 90 bp CTAGGCTTGTGCTCATGTCCAGCAAATCCAACAGGTGAAAAATCTAGCTTGTCATCCTCCCCACCGAGGTaGTTTCGGTCCAACGGCGAT +
Preference number: 4 (lower is better)
Translates to: LGLCSCPANPTGEKSSLSSSPPR*FRSNGD
Trigger: ATCGCCGTTGGACCGAAATCACCTCGGTGGGGAGGA...TGACAAGCTAGATTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR TCA 90 bp GATCAAGCTCCTCTTTCACACAGAAGAAACACCTGGCCTGGGAGGGGTAAAGGGGAATTAAGGAACCTGTaGGTAGGGATCAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: DQAPLSHRRNTWPGRGKGELRNL*VGIKLL
Trigger: GAGGAGCTTGATCCCTACTCACAGGTTCCTTAATTC...CCCTTTACCCCTCCCAGGCCAGGTGTTTCTTCTGTGTGAAAGAGGAGCTTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp CTAGGCTTGTGCTCATGTCCAGCAAATCCAACAGGTGAAAAATCTAGCTTGTCAGTGAGGGAACGGAAGTaGAGCAGGGACCAGAGTGCG +
Preference number: 4 (lower is better)
Translates to: LGLCSCPANPTGEKSSLSVRERK*SRDQSA
Trigger: CGCACTCTGGTCCCTGCTGCACTTCCGTTCCCTCAC...TGACAAGCTAGATTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp CAAATTGGAAGCCTAGGCTTGTGCTCATGTCCAGCAAATCCAACAGGTGAAAAAGGCTCTCGTGCCGGCTaGAGATGCTTCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QIGSLGLCSCPANPTGEKGSRAG*RCFSGR
Trigger: CCTTCCAGAGAAGCATCTGCAGCCGGCACGAGAGCC...TTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp GAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCAGGAAGTTGTCCTTCTaGAGTTCAGTGAGGGAACGG +
Preference number: 4 (lower is better)
Translates to: ENEAQNMRWWSEGGRAGFRKLSF*SSVRER
Trigger: CCGTTCCCTCACTGAACTCCAGAAGGACAACTTCCT...GAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CCA 90 bp CAAATTGGAAGCCTAGGCTTGTGCTCATGTCCAGCAAATCCAACAGGTGAAAAAACACCTGCACGCGGCTaGAGTGCCAGCAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: QIGSLGLCSCPANPTGEKTPARG*SASRWR
Trigger: TCTCCATCTGCTGGCACTCCAGCCGCGTGCAGGTGT...TTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAATTTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp TTGTTAAAGCTACCCAACCGCCCCATGGGACCGAGTGGACTCATTTACCGAGGAATGTCTGAACCTTGCTaGGCGTCACTTCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: LLKLPNRPMGPSGLIYRGMSEPC*ASLPHL
Trigger: CAAATGAGGAAGTGACGCCCAGCAAGGTTCAGACAT...TCCTCGGTAAATGAGTCCACTCGGTCCCATGGGGCGGTTGGGTAGCTTTAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR GCA 90 bp AGTTTATGTAAGCATTCAACAATTGGGAGCGAATTTTCTACAATCGCGAGTGCGACATGTGAGTGCAGCTaGAGCCGGGGGACGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SLCKHSTIGSEFSTIASATCECS*SRGTAD
Trigger: GTCAGCCGTCCCCCGGCTGCAGCTGCACTCACATGT...CGCACTCGCGATTGTAGAAAATTCGCTCCCAATTGTTGAATGCTTACATAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp TACAGCCCTGAAATTCAAATTGGAAGCCTAGGCTTGTGCTCATGTCCAGCAAATTTGACCAGGCTCTCGTaGCGGCTGCAGATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: YSPEIQIGSLGLCSCPANLTRLS*RLQMLL
Trigger: GAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAA...ATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAATTTGAATTTCAGGGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR GCA 90 bp CAAATTGGAAGCCTAGGCTTGTGCTCATGTCCAGCAAATCCAACAGGTGAAAAATGCTTCCCCTCCTCCTaGTTCACCGAGATCACCACC +
Preference number: 4 (lower is better)
Translates to: QIGSLGLCSCPANPTGEKCFPSS*FTEITT
Trigger: GGTGGTGATCTCGGTGAAGCAGGAGGAGGGGAAGCA...TTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp AGTTTATGTAAGCATTCAACAATTGGGAGCGAATTTTCTACAATCGCGAGTGCGTGGAGTGCCAGCAGATaGAGAGGCTGCGGAGTGCCG +
Preference number: 4 (lower is better)
Translates to: SLCKHSTIGSEFSTIASAWSASR*RGCGVP
Trigger: CGGCACTCCGCAGCCTCTCCATCTGCTGGCACTCCA...CGCACTCGCGATTGTAGAAAATTCGCTCCCAATTGTTGAATGCTTACATAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp AGTTTATGTAAGCATTCAACAATTGGGAGCGAATTTTCTACAATCGCGAGTGCGTCGGCGAACTCCGAGTaGTCAGGTCCTCCCCACCGA +
Preference number: 4 (lower is better)
Translates to: SLCKHSTIGSEFSTIASASANSE*SGPPHR
Trigger: TCGGTGGGGAGGACCTGACCACTCGGAGTTCGCCGA...CGCACTCGCGATTGTAGAAAATTCGCTCCCAATTGTTGAATGCTTACATAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR TCA 90 bp CCGAGAGCCTTCACTAAATGTGACACATCAGTGACTACAGCCCTGAAATTCAAAGGGTTATGTGCATGGTaGGCAGTGGCCACATGTGAG +
Preference number: 4 (lower is better)
Translates to: PRAFTKCDTSVTTALKFKGLCAW*AVATCE
Trigger: CTCACATGTGGCCACTGCTCACCATGCACATAACCC...TTTGAATTTCAGGGCTGTAGTCACTGATGTGTCACATTTAGTGAAGGCTCTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR TCA 90 bp CTAGGCTTGTGCTCATGTCCAGCAAATCCAACAGGTGAAAAATCTAGCTTGTCAATGGTCTCGATCTCCTaGCCTCGTGAATCGCCCATC +
Preference number: 4 (lower is better)
Translates to: LGLCSCPANPTGEKSSLSMVSIS*PRESPI
Trigger: GATGGGCGATTCACGAGGTCAGGAGATCGAGACCAT...TGACAAGCTAGATTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CCA 90 bp CCGAGAGCCTTCACTAAATGTGACACATCAGTGACTACAGCCCTGAAATTCAAACACAGAAGAAACACCTaGCCTGGGAGGGGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: PRAFTKCDTSVTTALKFKHRRNT*PGRGKG
Trigger: CCCTTTACCCCTCCCAGGCCAGGTGTTTCTTCTGTG...TTTGAATTTCAGGGCTGTAGTCACTGATGTGTCACATTTAGTGAAGGCTCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
3UTR CAA 72 bp CAGATGTCTGAACCTTGCTGGGCGTCACTTCCTCATTaGTCAAGTGGGAGGAATTGTTACCTTCAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QMSEPCWASLPH*SSGRNCYLQGG
Trigger: ACCACCTTGAAGGTAACAATTCCTCCCACTTGACAAATGAGGAAGTGACGCCCAGCAAGGTTCAGACATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CCA 90 bp ACTGTGCAGACGGGGAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGAAGCCTCAAAGGTGTTaGGTGATCTTTTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: TVQTGKMRLRICGGGLKVKPQRC*VIFSSK
Trigger: CTTAGAAGAAAAGATCACCCAACACCTTTGAGGCTT...CACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTCCCCGTCTGCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534939.2
3UTR CAA 72 bp GACTACAGCCCTGAAATTCAAATTGGAAGCCTAGGCTaGTGCTCATGTCCAGCAAATCCAACAGGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: DYSPEIQIGSLG*CSCPANPTGEK
Trigger: TTTTTCACCTGTTGGATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAATTTGAATTTCAGGGCTGTAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS CCA 90 bp GGCGATCGGAGTCCCCGAGGACGGTGCAGGCGCCTCCCGCCTCCGTaGGGAGCGCACAGCAGAAAGCCTGTCGCACACCCGGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GDRSPRGRCRRLPPP*GAHSRKPVAHPEEE
Trigger: TTCCTCCTCCGGGTGTGCGACAGGCTTTCTGCTGTGCGCTCCCCACGGAGGCGGGAGGCGCCTGCACCGTCCTCGGGGACTCCGATCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS CCA 90 bp ATCGCGAGTGCGGTCACTGCGGGAACGCATCCGCCCCAGGAAAGGTaGGCGGGCAGACGCGCGTGCGGGCAAAACCGCAAGGAGGAGCGG +
Preference number: 5 (lower is better)
Translates to: IASAVTAGTHPPQER*AGRRACGQNRKEER
Trigger: CCGCTCCTCCTTGCGGTTTTGCCCGCACGCGCGTCTGCCCGCCCACCTTTCCTGGGGCGGATGCGTTCCCGCAGTGACCGCACTCGCGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS CCA 90 bp GGCGATCGGAGTCCCCGAGGACGGTGCAGGCGCCTCCCGCCTCCGTaGGGAGCGCACAGCAGAAAGCCTACTATGTGCCAGGTGCCACTG +
Preference number: 5 (lower is better)
Translates to: GDRSPRGRCRRLPPP*GAHSRKPTMCQVPL
Trigger: CAGTGGCACCTGGCACATAGTAGGCTTTCTGCTGTGCGCTCCCCACGGAGGCGGGAGGCGCCTGCACCGTCCTCGGGGACTCCGATCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS-3UTR CAA 90 bp TGCGGTGACCCGGGGCTCACTGGCTTGTTAAAGCTACCCAACCGCCCCATGGGACCGGCCGCGCTCACGTaGCGGCAGAAGTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: CGDPGLTGLLKLPNRPMGPAALT*RQKSTC
Trigger: GCACGTGGACTTCTGCCGCAACGTGAGCGCGGCCGG...TCCCATGGGGCGGTTGGGTAGCTTTAACAAGCCAGTGAGCCCCGGGTCACCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS GCA 90 bp CTCTTGAGCCAGTCCTCAATGCTGCACACCTGCACGCGGCTGGAGTaGCAGCAGATGGAGAGGCTGCGGAGTGCCGGGCCCAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LLSQSSMLHTCTRLE*QQMERLRSAGPRRK
Trigger: CTTCCTCCTGGGCCCGGCACTCCGCAGCCTCTCCATCTGCTGGCACTCCAGCCGCGTGCAGGTGTGCAGCATTGAGGACTGGCTCAAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS GCA 90 bp CACCTGCACGCGGCTGGAGTGCCAGCAGATGGAGAGGCTGCGGAGTaGCGGGCCCAGGAGGAAGTTGTCCTTCTGGAGTTCAGTGAGGGA +
Preference number: 5 (lower is better)
Translates to: HLHAAGVPADGEAAE*RAQEEVVLLEFSEG
Trigger: TCCCTCACTGAACTCCAGAAGGACAACTTCCTCCTGGGCCCGGCACTCCGCAGCCTCTCCATCTGCTGGCACTCCAGCCGCGTGCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS GCA 90 bp TGCTGCACACCTGCACGCGGCTGGAGTGCCAGCAGATGGAGAGGCTaGGGAGTGCCGGGCCCAGGAGGAAGTTGTCCTTCTGGAGTTCAG +
Preference number: 5 (lower is better)
Translates to: CCTPARGWSASRWRG*GVPGPGGSCPSGVQ
Trigger: CTGAACTCCAGAAGGACAACTTCCTCCTGGGCCCGGCACTCCGCAGCCTCTCCATCTGCTGGCACTCCAGCCGCGTGCAGGTGTGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS CCA 90 bp CAGCAGGCACTCCCGGTTGAGCTGGGTTATGTGCATGGTGAGCAGTaGCCACATGTGAGTGCAGCTGCAGCCGGGGGACGGCTGACCTGC +
Preference number: 5 (lower is better)
Translates to: QQALPVELGYVHGEQ*PHVSAAAAGGRLTC
Trigger: GCAGGTCAGCCGTCCCCCGGCTGCAGCTGCACTCACATGTGGCCACTGCTCACCATGCACATAACCCAGCTCAACCGGGAGTGCCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CAA 90 bp AGCCTGCTTCCAGTCCAGAAGGACCGACTAATGGGCCGGGGCCTTGGCTCCCCGCATCTGCGTGGGTTCTaGGCTCGTAGCCTTGGGAGC +
Preference number: 5 (lower is better)
Translates to: SLLPVQKDRLMGRGLGSPHLRGF*ARSLGS
Trigger: GCTCCCAAGGCTACGAGCCAAGAACCCACGCAGATG...CGGGGAGCCAAGGCCCCGGCCCATTAGTCGGTCCTTCTGGACTGGAAGCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS CCA 90 bp CGGAAGTGCAGCAGGGACCAGAGTGCGGGGTCCTCAAACACGTCGTaGAGCTGGGAGCAGGTCCTGGCAAGGCTCTTCCTGCTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RKCSRDQSAGSSNTS*SWEQVLARLFLLSL
Trigger: CAAGGACAGCAGGAAGAGCCTTGCCAGGACCTGCTCCCAGCTCCACGACGTGTTTGAGGACCCCGCACTCTGGTCCCTGCTGCACTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS CCA 90 bp AGTCCTCAATGCTGCACACCTGCACGCGGCTGGAGTGCCAGCAGATaGAGAGGCTGCGGAGTGCCGGGCCCAGGAGGAAGTTGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SPQCCTPARGWSASR*RGCGVPGPGGSCPS
Trigger: AGAAGGACAACTTCCTCCTGGGCCCGGCACTCCGCAGCCTCTCCATCTGCTGGCACTCCAGCCGCGTGCAGGTGTGCAGCATTGAGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CAA 90 bp GCAGTCCTAACCCGCTTTCCCTGGAAACAAACGGGACCAGCCTGCTTCCAGTCCGCAGCCAACGTGCGGTaGGTGACGCGCGCGCAGTTC +
Preference number: 5 (lower is better)
Translates to: AVLTRFPWKQTGPACFQSAANVR*VTRAQF
Trigger: GAACTGCGCGCGCGTCACCAACCGCACGTTGGCTGC...GGACTGGAAGCAGGCTGGTCCCGTTTGTTTCCAGGGAAAGCGGGTTAGGACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS TCA 90 bp TGCGGAGTGCCGGGCCCAGGAGGAAGTTGTCCTTCTGGAGTTCAGTaGGGGAACGGAAGTGCAGCAGGGACCAGAGTGCGGGGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: CGVPGPGGSCPSGVQ*GNGSAAGTRVRGPQ
Trigger: TTGAGGACCCCGCACTCTGGTCCCTGCTGCACTTCCGTTCCCTCACTGAACTCCAGAAGGACAACTTCCTCCTGGGCCCGGCACTCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS TCA 90 bp ACGCCAGGTTGGGGCACCTGTCGCACACCCGGAGGAGGAAATCATTaGCCAGGCTCTCGTGCCGGCTGCAGATGCTTCTCTGGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: TPGWGTCRTPGGGNH*PGSRAGCRCFSGRH
Trigger: GTGCCTTCCAGAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCCGGGTGTGCGACAGGTGCCCCAACCTGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638704.2
CDS GCA 90 bp CTTCTCTGGAAGGCACTCTTGAGCCAGTCCTCAATGCTGCACACCTaGACGCGGCTGGAGTGCCAGCAGATGGAGAGGCTGCGGAGTGCC +
Preference number: 5 (lower is better)
Translates to: LLWKALLSQSSMLHT*TRLECQQMERLRSA
Trigger: GGCACTCCGCAGCCTCTCCATCTGCTGGCACTCCAGCCGCGTGCAGGTGTGCAGCATTGAGGACTGGCTCAAGAGTGCCTTCCAGAGAAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS CCA 90 bp TGCAGCAGGGACCAGAGTGCGGGGTCCTCAAACACGTCGTGGAGCTaGGAGCAGGTCCTGGCAAGGCTCTTCCTGCTGTCCTTGTCTAGG +
Preference number: 5 (lower is better)
Translates to: CSRDQSAGSSNTSWS*EQVLARLFLLSLSR
Trigger: CCTAGACAAGGACAGCAGGAAGAGCCTTGCCAGGACCTGCTCCCAGCTCCACGACGTGTTTGAGGACCCCGCACTCTGGTCCCTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS CCA 90 bp ATGGAGAGGCTGCGGAGTGCCGGGCCCAGGAGGAAGTTGTCCTTCTaGAGTTCAGTGAGGGAACGGAAGTGCAGCAGGGACCAGAGTGCG +
Preference number: 5 (lower is better)
Translates to: MERLRSAGPRRKLSF*SSVRERKCSRDQSA
Trigger: CGCACTCTGGTCCCTGCTGCACTTCCGTTCCCTCACTGAACTCCAGAAGGACAACTTCCTCCTGGGCCCGGCACTCCGCAGCCTCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CAA 90 bp GGAGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGCAGGCACTCCCGGTaGAGCTGGGTTATGTGCATG +
Preference number: 5 (lower is better)
Translates to: GGVKGFVAAGAGWSRSVNSRHSR*SWVMCM
Trigger: CATGCACATAACCCAGCTCAACCGGGAGTGCCTGCT...GTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CAA 90 bp AGTGACAGGCCCATCCCAACCCTCAAGGCGGTGGGGGCACGCGTTAGCATTGAGTCTTGGCTCGTAGCCTaGGGAGCCCCTAGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SDRPIPTLKAVGARVSIESWLVA*GAPSGK
Trigger: CTTCCCACTAGGGGCTCCCAAGGCTACGAGCCAAGA...CTCAATGCTAACGCGTGCCCCCACCGCCTTGAGGGTTGGGATGGGCCTGTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CAA 90 bp TGCGGTGACCCGGGGCTCACTGGCTTGTTAAAGCTACCCAACCGCCCCATGGGACCGGGGCTCACTGGCTaGTTAAAGCTACCCAACCGC +
Preference number: 5 (lower is better)
Translates to: CGDPGLTGLLKLPNRPMGPGLTG*LKLPNR
Trigger: GCGGTTGGGTAGCTTTAACAAGCCAGTGAGCCCCGG...TCCCATGGGGCGGTTGGGTAGCTTTAACAAGCCAGTGAGCCCCGGGTCACCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CAA 90 bp GTCTACCACTGGGGTTGTGAGGAGCCTGCAACGGGGCCTTCCACAGGCAGTCCTAGCAGGCACTCCCGGTaGAGCTGGGTTATGTGCATG +
Preference number: 5 (lower is better)
Translates to: VYHWGCEEPATGPSTGSPSRHSR*SWVMCM
Trigger: CATGCACATAACCCAGCTCAACCGGGAGTGCCTGCT...AGGACTGCCTGTGGAAGGCCCCGTTGCAGGCTCCTCACAACCCCAGTGGTAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CAA 90 bp AGGGGTAAAGGGCTTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGGGGCCCAGGAGGAAGTaGTCCTTCTGGAGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: RGKGLCRSWRWVEPECEQGPRRK*SFWSSV
Trigger: CACTGAACTCCAGAAGGACAACTTCCTCCTGGGCCC...CTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CAA 90 bp TCGGTAACGTGGCCGCAGCCCGAGAGCGTGACGGACGCCAGGTTGGGGCACCTGACAACCCTTGACTCTTaGTTTCGCTCTGGATGTGCT +
Preference number: 5 (lower is better)
Translates to: SVTWPQPESVTDARLGHLTTLDS*FRSGCA
Trigger: AGCACATCCAGAGCGAAACAAAGAGTCAAGGGTTGT...CAGGTGCCCCAACCTGGCGTCCGTCACGCTCTCGGGCTGCGGCCACGTTACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CAA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCAGCAGCCAACGTGCGGTaGGTGACGCGCGCGCAGTTC +
Preference number: 5 (lower is better)
Translates to: RLRICGGGLKVEELGSKPAANVR*VTRAQF
Trigger: GAACTGCGCGCGCGTCACCAACCGCACGTTGGCTGC...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CAA 90 bp ACTGTGCAGACGGGGAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGCCGGCCGCGCTCACGTaGCGGCAGAAGTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: TVQTGKMRLRICGGGLKVPAALT*RQKSTC
Trigger: GCACGTGGACTTCTGCCGCAACGTGAGCGCGGCCGG...CACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTCCCCGTCTGCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CAA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCAGTGACGGACGCCAGGTaGGGGCACCTGTCGCACACC +
Preference number: 5 (lower is better)
Translates to: RLRICGGGLKVEELGSKPVTDAR*GHLSHT
Trigger: GGTGTGCGACAGGTGCCCCAACCTGGCGTCCGTCAC...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638704.2
CDS TCA 90 bp AGCGCACAGCAGAAAGCCTGTCGCACACCCGGAGGAGGAAATCATTaGCCAGGCTCTCGTGCCGGCTGCAGATGCTTCTCTGGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: SAQQKACRTPGGGNH*PGSRAGCRCFSGRH
Trigger: GTGCCTTCCAGAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCCGGGTGTGCGACAGGCTTTCTGCTGTGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS GCA 90 bp CAAACACGTCGTGGAGCTGGGAGCAGGTCCTGGCAAGGCTCTTCCTaGTGTCCTTGTCTAGGAAGGAGAAGAGGTGCAGCAGGCACTCCC +
Preference number: 5 (lower is better)
Translates to: QTRRGAGSRSWQGSS*CPCLGRRRGAAGTP
Trigger: GGGAGTGCCTGCTGCACCTCTTCTCCTTCCTAGACAAGGACAGCAGGAAGAGCCTTGCCAGGACCTGCTCCCAGCTCCACGACGTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS GCA 90 bp CCCAGGAGGAAGTTGTCCTTCTGGAGTTCAGTGAGGGAACGGAAGTaGAGCAGGGACCAGAGTGCGGGGTCCTCAAACACGTCGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PRRKLSFWSSVRERK*SRDQSAGSSNTSWS
Trigger: GCTCCACGACGTGTTTGAGGACCCCGCACTCTGGTCCCTGCTGCACTTCCGTTCCCTCACTGAACTCCAGAAGGACAACTTCCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CAA 90 bp TTTGTCGCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGCGCCCATCACAGTCTCTGGAAGGCACTCTaGAGCCAGTCCTCAATGCTG +
Preference number: 5 (lower is better)
Translates to: FVAAGAGWSRSVNSAHHSLWKAL*SQSSML
Trigger: CAGCATTGAGGACTGGCTCAAGAGTGCCTTCCAGAG...ACTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS GCA 90 bp CGCCTCCCGCCTCCGTGGGGAGCGCACAGCAGAAAGCCTACTATGTaGCAGGTGCCACTGTGTCATTTAATCCTCTTACCCTGTCGCACA +
Preference number: 5 (lower is better)
Translates to: RLPPPWGAHSRKPTM*QVPLCHLILLPCRT
Trigger: TGTGCGACAGGGTAAGAGGATTAAATGACACAGTGGCACCTGGCACATAGTAGGCTTTCTGCTGTGCGCTCCCCACGGAGGCGGGAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS CCA 90 bp AGAGTGCGGGGTCCTCAAACACGTCGTGGAGCTGGGAGCAGGTCCTaGCAAGGCTCTTCCTGCTGTCCTTGTCTAGGAAGGAGAAGAGGT +
Preference number: 5 (lower is better)
Translates to: RVRGPQTRRGAGSRS*QGSSCCPCLGRRRG
Trigger: ACCTCTTCTCCTTCCTAGACAAGGACAGCAGGAAGAGCCTTGCCAGGACCTGCTCCCAGCTCCACGACGTGTTTGAGGACCCCGCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CAA 90 bp AGCCTGCTTCCAGTCCAGAAGGACCGACTAATGGGCCGGGGCCTTGGCTCCCCGGCGTCACTTCCTCATTaGTCAAGTGGGAGGAATTGT +
Preference number: 5 (lower is better)
Translates to: SLLPVQKDRLMGRGLGSPASLPH*SSGRNC
Trigger: ACAATTCCTCCCACTTGACAAATGAGGAAGTGACGC...CGGGGAGCCAAGGCCCCGGCCCATTAGTCGGTCCTTCTGGACTGGAAGCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CAA 90 bp AGACACTTGGCTGCGATGACACTGCAGGGTTCCAAGTCGGCTTTCTGGCCGGCCGGGCCTCCTTCAGGTTaGTGTGCCCTCATTAGTCAC +
Preference number: 5 (lower is better)
Translates to: RHLAAMTLQGSKSAFWPAGPPSG*CALISH
Trigger: GTGACTAATGAGGGCACACAAACCTGAAGGAGGCCC...GGCCGGCCAGAAAGCCGACTTGGAACCCTGCAGTGTCATCGCAGCCAAGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CAA 90 bp ACCCTCAAGGCGGTGGGGGCACGCGTTAGCATTGAGTCCGGGTTCAGCTTAGTAAGCGGTGCTTGGCGATaGCTCCAGTCTAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: TLKAVGARVSIESGFSLVSGAWR*LQSSFK
Trigger: CTTGAAGCTAGACTGGAGCAATCGCCAAGCACCGCT...TACTAAGCTGAACCCGGACTCAATGCTAACGCGTGCCCCCACCGCCTTGAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CAA 90 bp TCAGGTTTGTGTGCCCTCATTAGTCACCCCGTCAACCTCTGCACCCCCAGTTTTTCTGGATGTGCTGCCTaGCAGGGGAGCGGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: SGLCALISHPVNLCTPSFSGCAA*QGSGAW
Trigger: CCAAGCACCGCTCCCCTGCAAGGCAGCACATCCAGA...AAAACTGGGGGTGCAGAGGTTGACGGGGTGACTAATGAGGGCACACAAACCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CAA 90 bp AATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAACCCACCCAGGTCGCTaGGCCAGAAAGCTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: NEAQNMRWWSEGGRAGFETHPGR*ARKLGG
Trigger: TCCCCCAAGCTTTCTGGCCAAGCGACCTGGGTGGGT...TTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS TCA 90 bp CATTTAATCCTCTTACCCTGTCGCACACCCGGAGGAGGAAATCATTaGCCAGGCTCTCGTGCCGGCTGCAGATGCTTCTCTGGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: HLILLPCRTPGGGNH*PGSRAGCRCFSGRH
Trigger: GTGCCTTCCAGAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCCGGGTGTGCGACAGGGTAAGAGGATTAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CAA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGGGGCCCAGGAGGAAGTaGTCCTTCTGGAGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: MRLRICGGGLKVEELGSKGPRRK*SFWSSV
Trigger: CACTGAACTCCAGAAGGACAACTTCCTCCTGGGCCC...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CAA 90 bp CGGAGTGTGAACAGCGCCCATCACAGTGCTCCTCGCCTCTTCCACCCACCCAGACCAGGGCTGCTGGTTTaGTTTTTGTTTAGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: RSVNSAHHSAPRLFHPPRPGLLV*FLFSLR
Trigger: CCTCAAACTAAACAAAAACAAAACCAGCAGCCCTGG...TCTGGGTGGGTGGAAGAGGCGAGGAGCACTGTGATGGGCGCTGTTCACACTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CAA 90 bp GCAGCTGGCGCTGGGTGGAGCCGGAGTGTGAACAGCGCCCATCACAGTGCTCCTTTGCCGTTTCCCTATTaGAGCAATGAATTAAGGAAC +
Preference number: 5 (lower is better)
Translates to: AAGAGWSRSVNSAHHSAPLPFPY*SNELRN
Trigger: GTTCCTTAATTCATTGCTCAAATAGGGAAACGGCAA...AGGAGCACTGTGATGGGCGCTGTTCACACTCCGGCTCCACCCAGCGCCAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CAA 90 bp GATCAAGCTCCTCTTTCACACAGAAGAAACACCTGGCCTGGGAGGGGTAAAGGGGACGGGGGTTTCACCTaGTTAGCCAGGATGGTCTCG +
Preference number: 5 (lower is better)
Translates to: DQAPLSHRRNTWPGRGKGDGGFT*LARMVS
Trigger: CGAGACCATCCTGGCTAACAAGGTGAAACCCCCGTC...CCCTTTACCCCTCCCAGGCCAGGTGTTTCTTCTGTGTGAAAGAGGAGCTTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CAA 90 bp GAAAATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCAGCAGGCACTCCCGGTaGAGCTGGGTTATGTGCATG +
Preference number: 5 (lower is better)
Translates to: ENEAQNMRWWSEGGRAGFSRHSR*SWVMCM
Trigger: CATGCACATAACCCAGCTCAACCGGGAGTGCCTGCT...GAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CAA 90 bp ATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCTCTGGAAGGCACTCTaGAGCCAGTCCTCAATGCTG +
Preference number: 5 (lower is better)
Translates to: MRLRICGGGLKVEELGSKLWKAL*SQSSML
Trigger: CAGCATTGAGGACTGGCTCAAGAGTGCCTTCCAGAG...CTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CAA 90 bp AATGAGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAACTCTGGAAGGCACTCTaGAGCCAGTCCTCAATGCTG +
Preference number: 5 (lower is better)
Translates to: NEAQNMRWWSEGGRAGFELWKAL*SQSSML
Trigger: CAGCATTGAGGACTGGCTCAAGAGTGCCTTCCAGAG...TTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534939.2
ENST00000638704.2
CDS-3UTR CAA 90 bp AGGCTCAGAATATGCGGTGGTGGTCTGAAGGTGGAAGAGCTGGGTTCGAAGCCAAGCAAAGAAAAGATCTaGAGCCAAGTTAGACTTGGT +
Preference number: 5 (lower is better)
Translates to: RLRICGGGLKVEELGSKPSKEKI*SQVRLG
Trigger: ACCAAGTCTAACTTGGCTCAAGATCTTTTCTTTGCT...TGGCTTCGAACCCAGCTCTTCCACCTTCAGACCACCACCGCATATTCTGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS GCA 90 bp GCCAGAAGAACCAGATTCAGTAGACGTTCATCAGTACCTACTATGTaGCAGGTGCCACTGTGTCATTTAATCCTCTTACCCTGTCGCACA +
Preference number: 5 (lower is better)
Translates to: ARRTRFSRRSSVPTM*QVPLCHLILLPCRT
Trigger: TGTGCGACAGGGTAAGAGGATTAAATGACACAGTGGCACCTGGCACATAGTAGGTACTGATGAACGTCTACTGAATCTGGTTCTTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS-3UTR CAA 90 bp CCGAGAGCCTTCACTAAATGTGACACATCAGTGACTACAGCCCTGAAATTCAAAATTGGAAGCCTAGGCTaGTGCTCATGTCCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: PRAFTKCDTSVTTALKFKIGSLG*CSCPAN
Trigger: ATTTGCTGGACATGAGCACAAGCCTAGGCTTCCAAT...TTTGAATTTCAGGGCTGTAGTCACTGATGTGTCACATTTAGTGAAGGCTCTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CAA 90 bp TGGCCCTTCTACCCTCTTATATACCAGTTACCTGTTGTCTCTTCCCCCACTAGAAATTTGTCTTTTTCCTaGCCGTTTCCCTATTTGAGC +
Preference number: 5 (lower is better)
Translates to: WPFYPLIYQLPVVSSPTRNLSFS*PFPYLS
Trigger: GCTCAAATAGGGAAACGGCAAGGAAAAAGACAAATT...TCTAGTGGGGGAAGAGACAACAGGTAACTGGTATATAAGAGGGTAGAAGGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS-3UTR CAA 90 bp AGTTTATGTAAGCATTCAACAATTGGGAGCGAATTTTCTACAATCGCGAGTGCGGTAAGCATTCAACAATaGGGAGCGAATTTTCTACAA +
Preference number: 5 (lower is better)
Translates to: SLCKHSTIGSEFSTIASAVSIQQ*GANFLQ
Trigger: TTGTAGAAAATTCGCTCCCAATTGTTGAATGCTTAC...CGCACTCGCGATTGTAGAAAATTCGCTCCCAATTGTTGAATGCTTACATAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS CCA 72 bp AGTCCCCGAGGACGGTGCAGGCGCCTCCCGCCTCCGTaGGGAGCGCACAGCAGAAAGCCTGTCGCACACCCG +
Preference number: 6 (lower is better)
Translates to: SPRGRCRRLPPP*GAHSRKPVAHP
Trigger: CGGGTGTGCGACAGGCTTTCTGCTGTGCGCTCCCCACGGAGGCGGGAGGCGCCTGCACCGTCCTCGGGGACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS CCA 72 bp GCGGTCACTGCGGGAACGCATCCGCCCCAGGAAAGGTaGGCGGGCAGACGCGCGTGCGGGCAAAACCGCAAG +
Preference number: 6 (lower is better)
Translates to: AVTAGTHPPQER*AGRRACGQNRK
Trigger: CTTGCGGTTTTGCCCGCACGCGCGTCTGCCCGCCCACCTTTCCTGGGGCGGATGCGTTCCCGCAGTGACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS GCA 72 bp GGAGCGGCTCGGTGGCTCCTTCTGCCCGTGCGCCCCTaGTTCCCCTCCTCCTGCTTCACCGAGATCACCACC +
Preference number: 6 (lower is better)
Translates to: GAARWLLLPVRP*FPSSCFTEITT
Trigger: GGTGGTGATCTCGGTGAAGCAGGAGGAGGGGAAGCAGGGGCGCACGGGCAGAAGGAGCCACCGAGCCGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS CCA 72 bp AGTCCCCGAGGACGGTGCAGGCGCCTCCCGCCTCCGTaGGGAGCGCACAGCAGAAAGCCTACTATGTGCCAG +
Preference number: 6 (lower is better)
Translates to: SPRGRCRRLPPP*GAHSRKPTMCQ
Trigger: CTGGCACATAGTAGGCTTTCTGCTGTGCGCTCCCCACGGAGGCGGGAGGCGCCTGCACCGTCCTCGGGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS CCA 72 bp CTCCCGGTTGAGCTGGGTTATGTGCATGGTGAGCAGTaGCCACATGTGAGTGCAGCTGCAGCCGGGGGACGG +
Preference number: 6 (lower is better)
Translates to: LPVELGYVHGEQ*PHVSAAAAGGR
Trigger: CCGTCCCCCGGCTGCAGCTGCACTCACATGTGGCCACTGCTCACCATGCACATAACCCAGCTCAACCGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS CCA 72 bp GACCAGAGTGCGGGGTCCTCAAACACGTCGTGGAGCTaGGAGCAGGTCCTGGCAAGGCTCTTCCTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: DQSAGSSNTSWS*EQVLARLFLLS
Trigger: GGACAGCAGGAAGAGCCTTGCCAGGACCTGCTCCCAGCTCCACGACGTGTTTGAGGACCCCGCACTCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS CCA 72 bp AGCAGGGACCAGAGTGCGGGGTCCTCAAACACGTCGTaGAGCTGGGAGCAGGTCCTGGCAAGGCTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: SRDQSAGSSNTS*SWEQVLARLFL
Trigger: CAGGAAGAGCCTTGCCAGGACCTGCTCCCAGCTCCACGACGTGTTTGAGGACCCCGCACTCTGGTCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS CAA 90 bp TGCCAGCAGATGGAGAGGCTGCGGAGTGCCGGGCCCAGGAGGAAGTaGTCCTTCTGGAGTTCAGTGAGGGAACGGAAGTGCAGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: CQQMERLRSAGPRRK*SFWSSVRERKCSRD
Trigger: GTCCCTGCTGCACTTCCGTTCCCTCACTGAACTCCAGAAGGACAACTTCCTCCTGGGCCCGGCACTCCGCAGCCTCTCCATCTGCTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS CAA 90 bp ACCAGGCTCTCGTGCCGGCTGCAGATGCTTCTCTGGAAGGCACTCTaGAGCCAGTCCTCAATGCTGCACACCTGCACGCGGCTGGAGTGC +
Preference number: 6 (lower is better)
Translates to: TRLSCRLQMLLWKAL*SQSSMLHTCTRLEC
Trigger: GCACTCCAGCCGCGTGCAGGTGTGCAGCATTGAGGACTGGCTCAAGAGTGCCTTCCAGAGAAGCATCTGCAGCCGGCACGAGAGCCTGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS CAA 90 bp GACGCCAGGTTGGGGCACCTGTCGCACACCCGGAGGAGGAAATCATaGACCAGGCTCTCGTGCCGGCTGCAGATGCTTCTCTGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: DARLGHLSHTRRRKS*TRLSCRLQMLLWKA
Trigger: TGCCTTCCAGAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCCGGGTGTGCGACAGGTGCCCCAACCTGGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638704.2
CDS TCA 72 bp CCGGGCCCAGGAGGAAGTTGTCCTTCTGGAGTTCAGTaGGGGAACGGAAGTGCAGCAGGGACCAGAGTGCGG +
Preference number: 6 (lower is better)
Translates to: PGPGGSCPSGVQ*GNGSAAGTRVR
Trigger: CCGCACTCTGGTCCCTGCTGCACTTCCGTTCCCTCACTGAACTCCAGAAGGACAACTTCCTCCTGGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS CCA 72 bp CTGCGGAGTGCCGGGCCCAGGAGGAAGTTGTCCTTCTaGAGTTCAGTGAGGGAACGGAAGTGCAGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: LRSAGPRRKLSF*SSVRERKCSRD
Trigger: GTCCCTGCTGCACTTCCGTTCCCTCACTGAACTCCAGAAGGACAACTTCCTCCTGGGCCCGGCACTCCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS CAA 90 bp TCGTGGAGCTGGGAGCAGGTCCTGGCAAGGCTCTTCCTGCTGTCCTaGTCTAGGAAGGAGAAGAGGTGCAGCAGGCACTCCCGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: SWSWEQVLARLFLLS*SRKEKRCSRHSRLS
Trigger: GCTCAACCGGGAGTGCCTGCTGCACCTCTTCTCCTTCCTAGACAAGGACAGCAGGAAGAGCCTTGCCAGGACCTGCTCCCAGCTCCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS GCA 72 bp AAGGCACTCTTGAGCCAGTCCTCAATGCTGCACACCTaGACGCGGCTGGAGTGCCAGCAGATGGAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: KALLSQSSMLHT*TRLECQQMERL
Trigger: CAGCCTCTCCATCTGCTGGCACTCCAGCCGCGTGCAGGTGTGCAGCATTGAGGACTGGCTCAAGAGTGCCTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS CAA 72 bp ATGGAGAGGCTGCGGAGTGCCGGGCCCAGGAGGAAGTaGTCCTTCTGGAGTTCAGTGAGGGAACGGAAGTGC +
Preference number: 6 (lower is better)
Translates to: MERLRSAGPRRK*SFWSSVRERKC
Trigger: GCACTTCCGTTCCCTCACTGAACTCCAGAAGGACAACTTCCTCCTGGGCCCGGCACTCCGCAGCCTCTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS CAA 72 bp TTGGGGCACCTGTCGCACACCCGGAGGAGGAAATCATaGACCAGGCTCTCGTGCCGGCTGCAGATGCTTCTC +
Preference number: 6 (lower is better)
Translates to: LGHLSHTRRRKS*TRLSCRLQMLL
Trigger: GAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCCGGGTGTGCGACAGGTGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638704.2
CDS CAA 90 bp GAGCGCACAGCAGAAAGCCTGTCGCACACCCGGAGGAGGAAATCATaGACCAGGCTCTCGTGCCGGCTGCAGATGCTTCTCTGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: ERTAESLSHTRRRKS*TRLSCRLQMLLWKA
Trigger: TGCCTTCCAGAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCCGGGTGTGCGACAGGCTTTCTGCTGTGCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS GCA 72 bp CGTGGAGCTGGGAGCAGGTCCTGGCAAGGCTCTTCCTaGTGTCCTTGTCTAGGAAGGAGAAGAGGTGCAGCA +
Preference number: 6 (lower is better)
Translates to: RGAGSRSWQGSS*CPCLGRRRGAA
Trigger: TGCTGCACCTCTTCTCCTTCCTAGACAAGGACAGCAGGAAGAGCCTTGCCAGGACCTGCTCCCAGCTCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360587.2
ENST00000534939.2
ENST00000638704.2
CDS CAA 72 bp GCAGAAAGCCTGTCGCACACCCGGAGGAGGAAATCATaGACCAGGCTCTCGTGCCGGCTGCAGATGCTTCTC +
Preference number: 6 (lower is better)
Translates to: AESLSHTRRRKS*TRLSCRLQMLL
Trigger: GAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCCGGGTGTGCGACAGGCTTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS CAA 72 bp CCTCTTACCCTGTCGCACACCCGGAGGAGGAAATCATaGACCAGGCTCTCGTGCCGGCTGCAGATGCTTCTC +
Preference number: 6 (lower is better)
Translates to: PLTLSHTRRRKS*TRLSCRLQMLL
Trigger: GAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCCGGGTGTGCGACAGGGTAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS TCA 72 bp CAGAAAGCCTGTCGCACACCCGGAGGAGGAAATCATTaGCCAGGCTCTCGTGCCGGCTGCAGATGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: QKACRTPGGGNH*PGSRAGCRCFS
Trigger: AGAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCCGGGTGTGCGACAGGCTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS TCA 72 bp CTCTTACCCTGTCGCACACCCGGAGGAGGAAATCATTaGCCAGGCTCTCGTGCCGGCTGCAGATGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: LLPCRTPGGGNH*PGSRAGCRCFS
Trigger: AGAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCCGGGTGTGCGACAGGGTAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS GCA 72 bp CCTCCGTGGGGAGCGCACAGCAGAAAGCCTACTATGTaGCAGGTGCCACTGTGTCATTTAATCCTCTTACCC +
Preference number: 6 (lower is better)
Translates to: PPWGAHSRKPTM*QVPLCHLILLP
Trigger: GGGTAAGAGGATTAAATGACACAGTGGCACCTGGCACATAGTAGGCTTTCTGCTGTGCGCTCCCCACGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560325.1
CDS CAA 90 bp TCATTTAATCCTCTTACCCTGTCGCACACCCGGAGGAGGAAATCATaGACCAGGCTCTCGTGCCGGCTGCAGATGCTTCTCTGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: SFNPLTLSHTRRRKS*TRLSCRLQMLLWKA
Trigger: TGCCTTCCAGAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCCGGGTGTGCGACAGGGTAAGAGGATTAAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS GCA 72 bp TTCAACAATTGGGAGCGAATTTTCTACAATCGCGAGTaGGGTCACTGCGGGAACGCATCCGCCCCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: FNNWERIFYNRE*GHCGNASAPGK
Trigger: CTTTCCTGGGGCGGATGCGTTCCCGCAGTGACCGCACTCGCGATTGTAGAAAATTCGCTCCCAATTGTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360587.2
CDS GCA 72 bp ACCAGATTCAGTAGACGTTCATCAGTACCTACTATGTaGCAGGTGCCACTGTGTCATTTAATCCTCTTACCC +
Preference number: 6 (lower is better)
Translates to: TRFSRRSSVPTM*QVPLCHLILLP
Trigger: GGGTAAGAGGATTAAATGACACAGTGGCACCTGGCACATAGTAGGTACTGATGAACGTCTACTGAATCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534939.2
CDS CAA 90 bp GTAGAAAATATGGGTAACTATGCAGTTTATGTAAGCATTCAACAATaGGGAGCGAATTTTCTACAATCGCGAGTGCGGTCACTGCGGGAA +
Preference number: 6 (lower is better)
Translates to: VENMGNYAVYVSIQQ*GANFLQSRVRSLRE
Trigger: TTCCCGCAGTGACCGCACTCGCGATTGTAGAAAATTCGCTCCCAATTGTTGAATGCTTACATAAACTGCATAGTTACCCATATTTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360587.2