RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000153558

Ensembl transcript IDs: ENST00000283627.10, ENST00000421391.5, ENST00000422741.5, ENST00000425973.5, ENST00000432809.5, ENST00000435207.5, ENST00000451636.5, ENST00000463698.5, ENST00000463736.5, ENST00000464164.5, ENST00000464990.1, ENST00000471208.1, ENST00000483037.5, ENST00000484457.6, ENST00000493778.5, ENST00000497411.5, ENST00000538892.5

Found 599 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTGTGAGGTTGCTGCAACCCGAAAGGCAGAGAGCCTGTAGCCGGTaGCAGCCCCTGCATATCTGCACCACACCTTCATCCGTGATACGT +
Preference number: 1 (lower is better)
Translates to: SVRLLQPERQRACSR*QPLHICTTPSSVIR
Trigger: ACGTATCACGGATGAAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGCTACAGGCTCTCTGCCTTTCGGGTTGCAGCAACCTCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR TCA 90 bp AGGTCTTCAAGGAGGAATCCCCAACACCAATGCAGCCTCGCAAGCTaGGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATTTTCCA +
Preference number: 1 (lower is better)
Translates to: RSSRRNPQHQCSLAS*ASSGIHRIASRYFP
Trigger: TGGAAAATATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCATTGGTGTTGGGGATTCCTCCTTGAAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
3UTR TCA 90 bp ATGTCAGAAAAACTCAGACTCACCAGGGCTTGCAGTTTAGGACAGTaGATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGGATGCAT +
Preference number: 1 (lower is better)
Translates to: MSEKLRLTRACSLGQ*MESWMSVLSVIRMH
Trigger: ATGCATCCTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGTCCTAAACTGCAAGCCCTGGTGAGTCTGAGTTTTTCTGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451636.5
3UTR CCA 90 bp CTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATaGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGAC +
Preference number: 1 (lower is better)
Translates to: LQSIQKSFTCKCLSQ*RINRLGDGGVGQED
Trigger: GTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR TCA 90 bp AACAGCTTCTTGTTGTGGTGGGAGGGCTCTTTCATCTTTAACAGGTaGATAATGTCAGAAAAACTCAGACTCACCAGGGCTTGCAGTTTA +
Preference number: 1 (lower is better)
Translates to: NSFLLWWEGSFIFNR*IMSEKLRLTRACSL
Trigger: TAAACTGCAAGCCCTGGTGAGTCTGAGTTTTTCTGACATTATTCACCTGTTAAAGATGAAAGAGCCCTCCCACCACAACAAGAAGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451636.5
3UTR TCA 90 bp TCTTACAAGAGGTTCTCCTGTTTTGTAAATGAGGCCATGGATCATTaGGCATCAAGTCCAATAGCTGTGACTGATGATAGGTTGTATCCT +
Preference number: 1 (lower is better)
Translates to: SYKRFSCFVNEAMDH*ASSPIAVTDDRLYP
Trigger: AGGATACAACCTATCATCAGTCACAGCTATTGGACTTGATGCTCAATGATCCATGGCCTCATTTACAAAACAGGAGAACCTCTTGTAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484457.6
3UTR GCA 90 bp ATTGTTTCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTAACTaGAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAAT +
Preference number: 1 (lower is better)
Translates to: IVSQQNKGENYHQSN*NPYRSLLPVNAFPN
Trigger: ATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGAAACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CCA 90 bp GCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGCCTGCGTCAGTCAAATaGGAGCATCGGGCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: ARVTCWQSYSSRRSRPRQPASVK*EHRAAS
Trigger: GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG...CTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp CCGCTTGATGCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCTGCTGTCGGTGGGGTaGCGGGAGCAAAGTAGGCGT +
Preference number: 2 (lower is better)
Translates to: PLDACTGNLLAVVQLEALLLSVG*REQSRR
Trigger: ACGCCTACTTTGCTCCCGTCACCCCACCGACAGCAG...GAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CCA 90 bp TGCAGCCCCTCAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCCTGCGTCAGTCAAATaGGAGCATCGGGCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: CSPSGAGLSGLDNLAPVPPASVK*EHRAAS
Trigger: GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG...AGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CCA 90 bp TGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAACCCGCAGCCTCTCATaGCCACAGGTACTGTTGCTC +
Preference number: 2 (lower is better)
Translates to: CTGNLLAVVQLEALQASATRSLS*PQVLLL
Trigger: GAGCAACAGTACCTGTGGCCATGAGAGGCTGCGGGT...TGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CCA 90 bp AGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCACATCAGTGATGTGCCTCATCACCCCTTaGGCCCAGGCAGCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: RRSRPRQFSRCSRATSVMCLITP*AQAAAV
Trigger: GACAGCAGCTGCCTGGGCCCAAGGGGTGATGAGGCA...CATCACTGATGTGGCCCTGGAACACCTAGAGAACTGCCGAGGCCTGGAGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp GCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTAGTAGGCGTGGACTTTaGCATGAGGGAGCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: AGSRTARGAPGLGSSLGVSRRGL*HEGAEP
Trigger: GGGCTCAGCTCCCTCATGTCAAAGTCCACGCCTACT...AACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp GCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCATCCGCTTGATGCCTaGACGGGTAACCTGCTGGCA +
Preference number: 2 (lower is better)
Translates to: AGSRTARGAPGLGSSLGVHPLDA*TGNLLA
Trigger: TGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATG...AACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CCA 90 bp TTGATGCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGACCCGCAGCCTCTCATaGCCACAGGTACTGTTGCTC +
Preference number: 2 (lower is better)
Translates to: LMPARVTCWQSYSSRRSRTRSLS*PQVLLL
Trigger: GAGCAACAGTACCTGTGGCCATGAGAGGCTGCGGGT...CCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CCA 90 bp CCTCATCACCCCTTGGGCCCAGGCAGCTGCTGTCAGAGAATGACACAGCACCTGTGCCACTGCTGTCGGTaGGGTGACGGGAGCAAAGTA +
Preference number: 2 (lower is better)
Translates to: PHHPLGPGSCCQRMTQHLCHCCR*GDGSKV
Trigger: TACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCA...CAGGTGCTGTGTCATTCTCTGACAGCAGCTGCCTGGGCCCAAGGGGTGATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp ACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGCCATCCTTCGTGATCTaGTCACACCAAGAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: TCWQSYSSRRSRPRQFSRPSFVI*SHQERF
Trigger: GAACCTCTCTTGGTGTGATCAGATCACGAAGGATGG...CCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp TCAGTGATGAGGAGGCAGTTGTCCAACTCCAGTACCCGCAGCCTCTCATGGCCAAGAGCCTGTAGCCGGTaGCAGCCCCTGCATATCTGC +
Preference number: 2 (lower is better)
Translates to: SVMRRQLSNSSTRSLSWPRACSR*QPLHIC
Trigger: GCAGATATGCAGGGGCTGTCACCGGCTACAGGCTCT...TGGCCATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTCATCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp ACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGGTACTGTTGCTCAGGTaGAGGATCCCATCATCTGTG +
Preference number: 2 (lower is better)
Translates to: TCWQSYSSRRSRPRQFSRVLLLR*RIPSSV
Trigger: CACAGATGATGGGATCCTGCACCTGAGCAACAGTAC...CCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CCA 90 bp CCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGAGCACGGGTAACCTGCTaGCAGTCGTACAGCTCGAGG +
Preference number: 2 (lower is better)
Translates to: PASVKWEHRAASKICSRGARVTC*QSYSSR
Trigger: CCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC...TCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp TCGCTGTCCACTTCCTGCCACTGCTGTCGGTGGGGTGACGGGAGCAAAGTAGGCGAATGGAGAGCTGGATaGGTGTGCTGTCGGTTATCA +
Preference number: 2 (lower is better)
Translates to: SLSTSCHCCRWGDGSKVGEWRAG*VCCRLS
Trigger: TGATAACCGACAGCACACTCATCCAGCTCTCCATTC...GCCTACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCAGGAAGTGGACAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp CCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACATCCGCTTGATGCCTaGACGGGTAACCTGCTGGCA +
Preference number: 2 (lower is better)
Translates to: PASVKWEHRAASKICSRGHPLDA*TGNLLA
Trigger: TGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATG...TCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR CAA 90 bp CAGTTCTCTAGGTGTTCCAGGGCCACATCAGTGATGAGGAGGCAGTaGTCCAACTCCAGTACCCGCAGCCTCTCATGGCCACAGGTACTG +
Preference number: 2 (lower is better)
Translates to: QFSRCSRATSVMRRQ*SNSSTRSLSWPQVL
Trigger: CAGTACCTGTGGCCATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTCATCACTGATGTGGCCCTGGAACACCTAGAGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR CAA 90 bp CAGGAAGACTCAGGTCTTCTAGAGGAAAGGATGCCTCATCACCCCTaGGGCCCAGGCAGCTGCTGTCAGAGAATGACACAGCACCTGCAC +
Preference number: 2 (lower is better)
Translates to: QEDSGLLEERMPHHP*GPGSCCQRMTQHLH
Trigger: GTGCAGGTGCTGTGTCATTCTCTGACAGCAGCTGCCTGGGCCCAAGGGGTGATGAGGCATCCTTTCCTCTAGAAGACCTGAGTCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp GCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAGCAGGACTGCAAGTTaGGGCTCACAAGCTCATGGC +
Preference number: 2 (lower is better)
Translates to: ASGSLQNLQSRTVQTQGCSRTAS*GSQAHG
Trigger: GCCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCT...ACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp CCTCATCACCCCTTGGGCCCAGGCAGCTGCTGTCAGAGAATGACACAGCACCTGGAATGGAGAGCTGGATaGGTGTGCTGTCGGTTATCA +
Preference number: 2 (lower is better)
Translates to: PHHPLGPGSCCQRMTQHLEWRAG*VCCRLS
Trigger: TGATAACCGACAGCACACTCATCCAGCTCTCCATTC...CAGGTGCTGTGTCATTCTCTGACAGCAGCTGCCTGGGCCCAAGGGGTGATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp TCGCTGTCCACTTCCTGCCACTGCTGTCGGTGGGGTGACGGGAGCAAAGTAGGCGTTTCGGCAGTTCTGTaGAAAGGTCTTCAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: SLSTSCHCCRWGDGSKVGVSAVL*KGLQGG
Trigger: TCCTCCTTGAAGACCTTTGCACAGAACTGCCGAAAC...GCCTACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCAGGAAGTGGACAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp TGCAGCCCCTCAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTAGCCTTGGAAATCTGTaGACATCGGCACAAAGTTAC +
Preference number: 2 (lower is better)
Translates to: CSPSGAGLSGLDNLAPVPSLGNL*TSAQSY
Trigger: GTAACTTTGTGCCGATGTGCACAGATTTCCAAGGCT...AGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435207.5
3UTR-3UTR CCA 90 bp TCAGTGATGAGGAGGCAGTTGTCCAACTCCAGTACCCGCAGCCTCTCATGGCCAGTGATGAGTTCACAGTaGGACAGGCTCAGGGCTTGC +
Preference number: 2 (lower is better)
Translates to: SVMRRQLSNSSTRSLSWPVMSSQ*DRLRAC
Trigger: GCAAGCCCTGAGCCTGTCCCACTGTGAACTCATCAC...TGGCCATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTCATCACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
3UTR-3UTR TCA 90 bp GAGGAGGCAGTTGTCCAACTCCAGTACCCGCAGCCTCTCATGGCCACAGGTACTCCATCCTTCGTGATCTaGTCACACCAAGAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: EEAVVQLQYPQPLMATGTPSFVI*SHQERF
Trigger: GAACCTCTCTTGGTGTGATCAGATCACGAAGGATGG...AGTACCTGTGGCCATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp GAGGAGGCAGTTGTCCAACTCCAGTACCCGCAGCCTCTCATGGCCACAGGTACTCGATGCCATCCTTCGTaGTCTGATCACACCAAGAGA +
Preference number: 2 (lower is better)
Translates to: EEAVVQLQYPQPLMATGTRCHPS*SDHTKR
Trigger: TCTCTTGGTGTGATCAGATCACGAAGGATGGCATCG...AGTACCTGTGGCCATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp GAGGAGGCAGTTGTCCAACTCCAGTACCCGCAGCCTCTCATGGCCACAGGTACTAATCAACAGATTGGGTaGTGGTGGAGTCGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: EEAVVQLQYPQPLMATGTNQQIG*WWSRSG
Trigger: TCCTGACCGACTCCACCATCACCCAATCTGTTGATT...AGTACCTGTGGCCATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp CGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTCATCTTCTAACTGTGTaGAGCCCCTCAGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: RQSNGSIGQPPKFAVADSHLLTV*SPSGAG
Trigger: CCCTGCTCCTGAGGGGCTGCACACAGTTAGAAGATG...ACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp TGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCATGTCGGTTATCAGGATaGATTCTTCAAGATCCATCT +
Preference number: 2 (lower is better)
Translates to: CTGNLLAVVQLEALQASACRLSG*ILQDPS
Trigger: AGATGGATCTTGAAGAATGCATCCTGATAACCGACA...TGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp GGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAAGCAGGACTGCAAGTTaGGGCTCACAAGCTCATGGC +
Preference number: 2 (lower is better)
Translates to: GSLQNLQSRTVQTQGCKRSRTAS*GSQAHG
Trigger: GCCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCT...TCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp AAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCAGCAGGACTGCAAGTTaGGGCTCACAAGCTCATGGC +
Preference number: 2 (lower is better)
Translates to: KPASVKWEHRAASKICSRSRTAS*GSQAHG
Trigger: GCCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCT...GCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp AAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGAGAGCCTGTAGCCGGTaGCAGCCCCTGCATATCTGC +
Preference number: 2 (lower is better)
Translates to: KICSRGQFKPRAVREASVRACSR*QPLHIC
Trigger: GCAGATATGCAGGGGCTGTCACCGGCTACAGGCTCT...CACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp GGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGACATCTTCTAACTGTGTaGAGCCCCTCAGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: GSLQNLQSRTVQTQGCKRHLLTV*SPSGAG
Trigger: CCCTGCTCCTGAGGGGCTGCACACAGTTAGAAGATG...TCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp GCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGCAGCCCCTGCATATCTaGACCACACCTTCATCCGTG +
Preference number: 2 (lower is better)
Translates to: AASKICSRGQFKPRAVREQPLHI*TTPSSV
Trigger: CACGGATGAAGGTGTGGTGCAGATATGCAGGGGCTG...CTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp GGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGACAGCCCCTGCATATCTaGACCACACCTTCATCCGTG +
Preference number: 2 (lower is better)
Translates to: GSLQNLQSRTVQTQGCKRQPLHI*TTPSSV
Trigger: CACGGATGAAGGTGTGGTGCAGATATGCAGGGGCTG...TCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp AAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCCAGCCCCTGCATATCTaGACCACACCTTCATCCGTG +
Preference number: 2 (lower is better)
Translates to: KPASVKWEHRAASKICSRQPLHI*TTPSSV
Trigger: CACGGATGAAGGTGTGGTGCAGATATGCAGGGGCTG...GCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CCA 90 bp TGTGCAGCCCCTCAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCATCTTCTCCAATTCGTaGCAATTCCGAGCTAAAAGT +
Preference number: 2 (lower is better)
Translates to: CAAPQEQGFQASTTSHQCIFSNS*QFRAKS
Trigger: ACTTTTAGCTCGGAATTGCCACGAATTGGAGAAGAT...GCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGCTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp AGGACAGTGAATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGGATGCATTCGCCGGTGACAGCCCCTaGATATCTGCACCACACCTT +
Preference number: 2 (lower is better)
Translates to: RTVNGELDECAVGYQDAFAGDSP*ISAPHL
Trigger: AAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGC...GAATGCATCCTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp AAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGGCCGGTGACAGCCCCTaGATATCTGCACCACACCTT +
Preference number: 2 (lower is better)
Translates to: KICSRGQFKPRAVREASVAGDSP*ISAPHL
Trigger: AAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGC...CACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp CACATCAGTGATGAGGAGGCAGTTGTCCAACTCCAGTACCCGCAGCCTCTCATGGTACTGTTGCTCAGGTaGAGGATCCCATCATCTGTG +
Preference number: 2 (lower is better)
Translates to: HISDEEAVVQLQYPQPLMVLLLR*RIPSSV
Trigger: CACAGATGATGGGATCCTGCACCTGAGCAACAGTAC...CATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTCATCACTGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp TGGCATGGTCCTAGCTGCATTGAGACCACTTGTCATGTGTTAACTGACACAAGGCCTGCACGGGTAACCTaGTGGCAGTCGTACAGCTCG +
Preference number: 2 (lower is better)
Translates to: WHGPSCIETTCHVLTDTRPARVT*WQSYSS
Trigger: CGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGG...CCTTGTGTCAGTTAACACATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp CAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCAAAAGATCTATTCTTTaGCAGTTGCTTCCATCCAGG +
Preference number: 2 (lower is better)
Translates to: QEQGFQASTTSHQCLDAIKRSIL*QLLPSR
Trigger: CCTGGATGGAAGCAACTGGCAAAGAATAGATCTTTT...GATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435207.5
3UTR-3UTR CCA 90 bp GTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCGCACGGGTAACCTGCTaGCAGTCGTACAGCTCGAGG +
Preference number: 2 (lower is better)
Translates to: VNAFPNGESTDWVMVESVARVTC*QSYSSR
Trigger: CCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC...GACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp AGGACAGTGAATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGGATGCATTCCATCTTCTAACTGTGTaGAGCCCCTCAGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: RTVNGELDECAVGYQDAFHLLTV*SPSGAG
Trigger: CCCTGCTCCTGAGGGGCTGCACACAGTTAGAAGATG...GAATGCATCCTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp GGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAATACGTGAGCAGGACTaGAAGTTGAGGCTCACAAGC +
Preference number: 2 (lower is better)
Translates to: GSLQNLQSRTVQTQGCKRIREQD*KLRLTS
Trigger: GCTTGTGAGCCTCAACTTGCAGTCCTGCTCACGTAT...TCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp ATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGAGGATACGTGAGCAGGACTaGAAGTTGAGGCTCACAAGC +
Preference number: 2 (lower is better)
Translates to: ICSRGQFKPRAVREASVRIREQD*KLRLTS
Trigger: GCTTGTGAGCCTCAACTTGCAGTCCTGCTCACGTAT...CCTCACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp TTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCTTCTAGAGGAAAGGATGCCATCCTTCGTGATCTaGTCACACCAAGAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: LGDGGVGQEDSGLLEERMPSFVI*SHQERF
Trigger: GAACCTCTCTTGGTGTGATCAGATCACGAAGGATGG...CATCCTTTCCTCTAGAAGACCTGAGTCTTCCTGACCGACTCCACCATCACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp AAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGTTTCGGCAGTTCTGTaGAAAGGTCTTCAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: KPASVKWEHRAASKICSRVSAVL*KGLQGG
Trigger: TCCTCCTTGAAGACCTTTGCACAGAACTGCCGAAAC...GCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp TTTAGGACAGTGAATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGGATGCAACAACCTCGCACCAGTaGCTCGATGCCATCCTTCGT +
Preference number: 2 (lower is better)
Translates to: FRTVNGELDECAVGYQDATTSHQ*LDAILR
Trigger: ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGT...TGCATCCTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGTCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp CTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACGAATGGAGAGCTGGATaGGTGTGCTGTCGGTTATCA +
Preference number: 2 (lower is better)
Translates to: LSQWRINRLGDGGVGQEDEWRAG*VCCRLS
Trigger: TGATAACCGACAGCACACTCATCCAGCTCTCCATTC...GTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp AATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCAATCAACAGATTGGGTaGTGGTGGAGTCGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: NGESTDWVMVESVRKTQVNQQIG*WWSRSG
Trigger: TCCTGACCGACTCCACCATCACCCAATCTGTTGATT...GACCTGAGTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR TCA 90 bp GGTGAAGACCCTGCTCCACCCAGTATAGAGTCCTCTTTTCTTTGGTGTCTCATGGGCTATAACACGTGCTaGAAAAGAGCAGACGCACTG +
Preference number: 2 (lower is better)
Translates to: GEDPAPPSIESSFLWCLMGYNTC*KRADAL
Trigger: CAGTGCGTCTGCTCTTTTTCAGCACGTGTTATAGCC...CATGAGACACCAAAGAAAAGAGGACTCTATACTGGGTGGAGCAGGGTCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422741.5
3UTR-3UTR GCA 90 bp TCCAATTCGTGGCAATTCCGAGCTAAAAGTGTAAAACCTGCGTCAGTCAAATGGGCCGGTGACAGCCCCTaGATATCTGCACCACACCTT +
Preference number: 2 (lower is better)
Translates to: SNSWQFRAKSVKPASVKWAGDSP*ISAPHL
Trigger: AAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGC...CCATTTGACTGACGCAGGTTTTACACTTTTAGCTCGGAATTGCCACGAATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp CAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGTTTCGGCAGTTCTGTaGAAAGGTCTTCAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: QNLQSRTVQTQGCKRGICVSAVL*KGLQGG
Trigger: TCCTCCTTGAAGACCTTTGCACAGAACTGCCGAAAC...ACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp TTGCAGTTTAGGACAGTGAATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGATACGTGAGCAGGACTaGAAGTTGAGGCTCACAAGC +
Preference number: 2 (lower is better)
Translates to: LQFRTVNGELDECAVGYQIREQD*KLRLTS
Trigger: GCTTGTGAGCCTCAACTTGCAGTCCTGCTCACGTAT...CTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGTCCTAAACTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CCA 90 bp CTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCCCTGCGTCAGTCAAATaGGAGCATCGGGCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: LQSIQKSFTCKCLSQWRIPASVK*EHRAAS
Trigger: GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG...GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR CCA 90 bp AGGATGCATTCTTCAAGATCCATCTTCTCCAATTCGTGGCAATTCCGAGCTAAATGCCACTGCTGTCGGTaGGGTGACGGGAGCAAAGTA +
Preference number: 2 (lower is better)
Translates to: RMHSSRSIFSNSWQFRAKCHCCR*GDGSKV
Trigger: TACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCA...TTTAGCTCGGAATTGCCACGAATTGGAGAAGATGGATCTTGAAGAATGCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp TCTTACAGAAAGAGAACCCAAACAGCTTCTTGTTGTGGTGGGAGGGCTCTTTCACGATGCCATCCTTCGTaGTCTGATCACACCAAGAGA +
Preference number: 2 (lower is better)
Translates to: SYRKRTQTASCCGGRALSRCHPS*SDHTKR
Trigger: TCTCTTGGTGTGATCAGATCACGAAGGATGGCATCG...TGAAAGAGCCCTCCCACCACAACAAGAAGCTGTTTGGGTTCTCTTTCTGTAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451636.5
3UTR-3UTR GCA 90 bp CATGGCAGTAATTCTGAATGTGTTTCAGAGCTTCATCTTCTAACTGTGTGCAGCACAACCTCGCACCAGTaGCTCGATGCCATCCTTCGT +
Preference number: 2 (lower is better)
Translates to: HGSNSECVSELHLLTVCSTTSHQ*LDAILR
Trigger: ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGT...GCTGCACACAGTTAGAAGATGAAGCTCTGAAACACATTCAGAATTACTGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp CTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGCAGCCCCTGCATATCTaGACCACACCTTCATCCGTG +
Preference number: 2 (lower is better)
Translates to: LLPVNAFPNGESTDWVMVQPLHI*TTPSSV
Trigger: CACGGATGAAGGTGTGGTGCAGATATGCAGGGGCTG...CACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGGCCGGTGACAGCCCCTaGATATCTGCACCACACCTT +
Preference number: 2 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVAGDSP*ISAPHL
Trigger: AAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGC...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp TTTTGTGCATCCATTGAGGTTCAAATGTTCAATGTTTCGGCAGTTCTGTGCAAATGCAGCCTCGCAAGCTaGGCTTCCTCAGGAATCCAC +
Preference number: 2 (lower is better)
Translates to: FCASIEVQMFNVSAVLCKCSLAS*ASSGIH
Trigger: GTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCA...TTTGCACAGAACTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp GTGATTTTTGTGCATCCATTGAGGTTCAAATGTTCAATGTTTCGGCAGTTCTGTTGCAGCCTCGCAAGCTaGGCTTCCTCAGGAATCCAC +
Preference number: 2 (lower is better)
Translates to: VIFVHPLRFKCSMFRQFCCSLAS*ASSGIH
Trigger: GTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCA...ACAGAACTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAAATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CCA 90 bp ATGGCCACAGGTACTGTTGCTCAGGTGCAGGATCCCATCATCTGTGATGAGTTCATCTTCTCCAATTCGTaGCAATTCCGAGCTAAAAGT +
Preference number: 2 (lower is better)
Translates to: MATGTVAQVQDPIICDEFIFSNS*QFRAKS
Trigger: ACTTTTAGCTCGGAATTGCCACGAATTGGAGAAGAT...GAACTCATCACAGATGATGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR CAA 90 bp AAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATaGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCTTCTAGAG +
Preference number: 2 (lower is better)
Translates to: KSFTCKCLSQWRINR*GDGGVGQEDSGLLE
Trigger: CTCTAGAAGACCTGAGTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR TCA 90 bp AGGATGCATTCTTCAAGATCCATCTTCTCCAATTCGTGGCAATTCCGAGCTAAACGATGCCATCCTTCGTaGTCTGATCACACCAAGAGA +
Preference number: 2 (lower is better)
Translates to: RMHSSRSIFSNSWQFRAKRCHPS*SDHTKR
Trigger: TCTCTTGGTGTGATCAGATCACGAAGGATGGCATCG...TTTAGCTCGGAATTGCCACGAATTGGAGAAGATGGATCTTGAAGAATGCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR TCA 90 bp AATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCACTGACACAAGGCTTTaGTTTGATTGTTTCACAGCA +
Preference number: 2 (lower is better)
Translates to: NGESTDWVMVESVRKTQVTDTRL*FDCFTA
Trigger: TGCTGTGAAACAATCAAATCAAAGCCTTGTGTCAGT...GACCTGAGTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR TCA 90 bp GCATCAAGTCCAATAGCTGTGACTGATGATAGGTTGTATCCTGGCTCAAAAGAAACAGAAACAAAAAGGTaGAGACCCTGCTCCACCCAG +
Preference number: 2 (lower is better)
Translates to: ASSPIAVTDDRLYPGSKETETKR*RPCSTQ
Trigger: CTGGGTGGAGCAGGGTCTTCACCTTTTTGTTTCTGT...TTCTTTTGAGCCAGGATACAACCTATCATCAGTCACAGCTATTGGACTTGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484457.6
3UTR-3UTR GCA 90 bp AATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCTGTCGGTTATCAGGATaGATTCTTCAAGATCCATCT +
Preference number: 2 (lower is better)
Translates to: NGESTDWVMVESVRKTQVCRLSG*ILQDPS
Trigger: AGATGGATCTTGAAGAATGCATCCTGATAACCGACA...GACCTGAGTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR GCA 90 bp ATGGTCTTTTTGAGGAATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTGGCATGGTCCTAGCTaGATTGAGACCACTTGTCAT +
Preference number: 2 (lower is better)
Translates to: MVFLRNAEYAKGRTFVPRWHGPS*IETTCH
Trigger: ATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA...CCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCATTCCTCAAAAAGACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CCA 90 bp AATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCAAATGCCTTTCCCAATaGAGAATCAACAGATTGGGT +
Preference number: 2 (lower is better)
Translates to: NGESTDWVMVESVRKTQVKCLSQ*RINRLG
Trigger: ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTT...GACCTGAGTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CCA 90 bp GCATCAAGTCCAATAGCTGTGACTGATGATAGGTTGTATCCTGGCTCAAAAGAATCTGGCCCTTCAGTTTaGGGGAGTGGTTGTTTGGAA +
Preference number: 2 (lower is better)
Translates to: ASSPIAVTDDRLYPGSKESGPSV*GSGCLE
Trigger: TTCCAAACAACCACTCCCCCAAACTGAAGGGCCAGA...TTCTTTTGAGCCAGGATACAACCTATCATCAGTCACAGCTATTGGACTTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484457.6
3UTR CAA 90 bp AGAGCTTCTACTTTCCAATCAGGCAACACAGACTCCGAGCTGCTTTaGTTTTTGGTCCCTGGAGGTGTATATGACAAGTTGACAGAAACA +
Preference number: 2 (lower is better)
Translates to: RASTFQSGNTDSELL*FLVPGGVYDKLTET
Trigger: TGTTTCTGTCAACTTGTCATATACACCTCCAGGGACCAAAAACAAAAGCAGCTCGGAGTCTGTGTTGCCTGATTGGAAAGTAGAAGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR TCA 90 bp AGGATGCATTCTTCAAGATCCATCTTCTCCAATTCGTGGCAATTCCGAGCTAAATGCAGTTTAGGACAGTaGATGGAGAGCTGGATGAGT +
Preference number: 2 (lower is better)
Translates to: RMHSSRSIFSNSWQFRAKCSLGQ*MESWMS
Trigger: ACTCATCCAGCTCTCCATTCACTGTCCTAAACTGCA...TTTAGCTCGGAATTGCCACGAATTGGAGAAGATGGATCTTGAAGAATGCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CCA 90 bp TGGCATGGTCCTAGCTGCATTGAGACCACTTGTCATGTGTTAACTGACACAAGGAAATGCCTTTCCCAATaGAGAATCAACAGATTGGGT +
Preference number: 2 (lower is better)
Translates to: WHGPSCIETTCHVLTDTRKCLSQ*RINRLG
Trigger: ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTT...CCTTGTGTCAGTTAACACATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CCA 90 bp GACTTTAATGCTTACTCTGATGATAATTGTGCTAAGTCCGTTTATGGGGAGATTTTCAGTTTGGGGGAGTaGTTGTTTGGAAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: DFNAYSDDNCAKSVYGEIFSLGE*LFGRAS
Trigger: GCTGGCCCTTCCAAACAACCACTCCCCCAAACTGAA...AATCTCCCCATAAACGGACTTAGCACAATTATCATCAGAGTAAGCATTAAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR TCA 90 bp CGTGCCCAGCCTGCAAACCTGATTTTCTTACAAGAGGTTCTCCTGTTTTGTAAAACTGACACAAGGCTTTaGTTTGATTGTTTCACAGCA +
Preference number: 2 (lower is better)
Translates to: RAQPANLIFLQEVLLFCKTDTRL*FDCFTA
Trigger: TGCTGTGAAACAATCAAATCAAAGCCTTGTGTCAGT...TTTACAAAACAGGAGAACCTCTTGTAAGAAAATCAGGTTTGCAGGCTGGGCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484457.6
3UTR-3UTR GCA 90 bp GTATCCTGGCTCAAAAGAAATCAATCATGTATAGAAGGCTCTGGTGGTTTGTTTTGGCATGGTCCTAGCTaGATTGAGACCACTTGTCAT +
Preference number: 2 (lower is better)
Translates to: VSWLKRNQSCIEGSGGLFWHGPS*IETTCH
Trigger: ATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA...AAACAAACCACCAGAGCCTTCTATACATGATTGATTTCTTTTGAGCCAGGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484457.6
3UTR-3UTR GCA 90 bp AAGTGTAAAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGGCAGAATCTCATCATTaGTACAAAACAATGATGTGT +
Preference number: 2 (lower is better)
Translates to: KCKTCVSQMGASGSLQNLAESHH*YKTMMC
Trigger: ACACATCATTGTTTTGTAGCAATGATGAGATTCTGC...CAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTTTACACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435207.5
3UTR-3UTR CCA 90 bp ATGGTCTTTTTGAGGAATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGAAATGCCTTTCCCAATaGAGAATCAACAGATTGGGT +
Preference number: 2 (lower is better)
Translates to: MVFLRNAEYAKGRTFVPRKCLSQ*RINRLG
Trigger: ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTT...CCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCATTCCTCAAAAAGACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR GCA 90 bp ATGGTCTTTTTGAGGAATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTATCACCAGAGTAACTaGAATCCATACAGAAGTCTT +
Preference number: 2 (lower is better)
Translates to: MVFLRNAEYAKGRTFVPRYHQSN*NPYRSL
Trigger: AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATA...CCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCATTCCTCAAAAAGACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR GCA 90 bp ATGGTCTTTTTGAGGAATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTTGCTTGGATGTGTCTaGCATAAAATCATAGCAATA +
Preference number: 2 (lower is better)
Translates to: MVFLRNAEYAKGRTFVPRLLGCV*HKIIAI
Trigger: TATTGCTATGATTTTATGGCAGACACATCCAAGCAA...CCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCATTCCTCAAAAAGACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CCA 90 bp GTATCCTGGCTCAAAAGAAATCAATCATGTATAGAAGGCTCTGGTGGTTTGTTTAAATGCCTTTCCCAATaGAGAATCAACAGATTGGGT +
Preference number: 2 (lower is better)
Translates to: VSWLKRNQSCIEGSGGLFKCLSQ*RINRLG
Trigger: ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTT...AAACAAACCACCAGAGCCTTCTATACATGATTGATTTCTTTTGAGCCAGGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484457.6
3UTR-3UTR GCA 90 bp TCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATCTTTTACCTGTAAATaGCTTTCCCAATGGAGAATC +
Preference number: 2 (lower is better)
Translates to: SIQKSFTCKCLSQWRINRSFTCK*LSQWRI
Trigger: GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGA...TCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR GCA 90 bp GACTTTAATGCTTACTCTGATGATAATTGTGCTAAGTCCGTTTATGGGGAGATTTCTTTTACCTGTAAATaGCTTTCCCAATGGAGAATC +
Preference number: 2 (lower is better)
Translates to: DFNAYSDDNCAKSVYGEISFTCK*LSQWRI
Trigger: GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGA...AATCTCCCCATAAACGGACTTAGCACAATTATCATCAGAGTAAGCATTAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR GCA 90 bp GACTTTAATGCTTACTCTGATGATAATTGTGCTAAGTCCGTTTATGGGGAGATTTTTGGAAAATGGTTTTaGTTGGATGTGTCTGCCATA +
Preference number: 2 (lower is better)
Translates to: DFNAYSDDNCAKSVYGEIFGKWF*LDVSAI
Trigger: TATGGCAGACACATCCAAGCAAAACCATTTTCCAAA...AATCTCCCCATAAACGGACTTAGCACAATTATCATCAGAGTAAGCATTAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR CCA 72 bp GCCCGCATCCGCTTGATGCCTGCACGGGTAACCTGCTaGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGG +
Preference number: 3 (lower is better)
Translates to: ARIRLMPARVTC*QSYSSRRSRPR
Trigger: CCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATGCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp GCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGTGGCCACAGGTACTGTaGCTCAGGTGCAGGATCCCA +
Preference number: 3 (lower is better)
Translates to: ACTGNLLAVVQLEALQASWPQVL*LRCRIP
Trigger: TGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCA...CGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp TGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTGATGAGGAGGCAGTaGTCCAACTCCAGTACCCGC +
Preference number: 3 (lower is better)
Translates to: CTGNLLAVVQLEALQASAVMRRQ*SNSSTR
Trigger: GCGGGTACTGGAGTTGGACAACTGCCTCCTCATCAC...TGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp GCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGGCAGCCTCCAAAATTaGCAGTCGCGGACAGTTCAA +
Preference number: 3 (lower is better)
Translates to: ACTGNLLAVVQLEALQASGSLQN*QSRTVQ
Trigger: TTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC...CGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp ACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGGTGATGAGGAGGCAGTaGTCCAACTCCAGTACCCGC +
Preference number: 3 (lower is better)
Translates to: TCWQSYSSRRSRPRQFSRVMRRQ*SNSSTR
Trigger: GCGGGTACTGGAGTTGGACAACTGCCTCCTCATCAC...CCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR GCA 72 bp GACATGAGGGAGCTGAGCCCGCATCCGCTTGATGCCTaGACGGGTAACCTGCTGGCAGTCGTACAGCTCGAG +
Preference number: 3 (lower is better)
Translates to: DMRELSPHPLDA*TGNLLAVVQLE
Trigger: CTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATGCGGGCTCAGCTCCCTCATGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp TCGCTGTCCACTTCCTGCCACTGCTGTCGGTGGGGTGACGGGAGCAAAGTAGGCGAGCAGGACTGCAAGTaGAGGCTCACAAGCTCATGG +
Preference number: 3 (lower is better)
Translates to: SLSTSCHCCRWGDGSKVGEQDCK*RLTSSW
Trigger: CCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCTC...GCCTACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCAGGAAGTGGACAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp AGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCACATCAGTGATGGAGGCATCTGTGAGGTaGCTGCAACCCGAAAGGCAG +
Preference number: 3 (lower is better)
Translates to: RRSRPRQFSRCSRATSVMEASVR*LQPERQ
Trigger: CTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTC...CATCACTGATGTGGCCCTGGAACACCTAGAGAACTGCCGAGGCCTGGAGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR TCA 72 bp TTGCTGCAACCCGAAAGGCAGAGAGCCTGTAGCCGGTaGCAGCCCCTGCATATCTGCACCACACCTTCATCC +
Preference number: 3 (lower is better)
Translates to: LLQPERQRACSR*QPLHICTTPSS
Trigger: GGATGAAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGCTACAGGCTCTCTGCCTTTCGGGTTGCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR GCA 72 bp AATGACACAGCACCTGCACAGTCGCTGTCCACTTCCTaGCACTGCTGTCGGTGGGGTGACGGGAGCAAAGTA +
Preference number: 3 (lower is better)
Translates to: NDTAPAQSLSTS*HCCRWGDGSKV
Trigger: TACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCAGGAAGTGGACAGCGACTGTGCAGGTGCTGTGTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR CCA 72 bp AGGCAGTTGTCCAACTCCAGTACCCGCAGCCTCTCATaGCCACAGGTACTGTTGCTCAGGTGCAGGATCCCA +
Preference number: 3 (lower is better)
Translates to: RQLSNSSTRSLS*PQVLLLRCRIP
Trigger: TGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR TCA 72 bp AGGAGGAATCCCCAACACCAATGCAGCCTCGCAAGCTaGGCTTCCTCAGGAATCCACCGCATCGCTTCGAGA +
Preference number: 3 (lower is better)
Translates to: RRNPQHQCSLAS*ASSGIHRIASR
Trigger: TCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCATTGGTGTTGGGGATTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp CTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACGGCAGCCTCCAAAATTaGCAGTCGCGGACAGTTCAA +
Preference number: 3 (lower is better)
Translates to: LRQSNGSIGQPPKFAVADGSLQN*QSRTVQ
Trigger: TTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC...GTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp TCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACGAGGCATCTGTGAGGTaGCTGCAACCCGAAAGGCAG +
Preference number: 3 (lower is better)
Translates to: SNGSIGQPPKFAVADSSNEASVR*LQPERQ
Trigger: CTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTC...GTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp TTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCTTCTAGAGGAAAGGATGTGGCCACAGGTACTGTaGCTCAGGTGCAGGATCCCA +
Preference number: 3 (lower is better)
Translates to: LGDGGVGQEDSGLLEERMWPQVL*LRCRIP
Trigger: TGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCA...CATCCTTTCCTCTAGAAGACCTGAGTCTTCCTGACCGACTCCACCATCACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp GGAAAGGATGCCTCATCACCCCTTGGGCCCAGGCAGCTGCTGTCAGAGAATGACTCCAGATGTTTCAGCTaGGAACAGAATCTGCTAAGG +
Preference number: 3 (lower is better)
Translates to: GKDASSPLGPRQLLSENDSRCFS*EQNLLR
Trigger: CCTTAGCAGATTCTGTTCCAAGCTGAAACATCTGGA...GTCATTCTCTGACAGCAGCTGCCTGGGCCCAAGGGGTGATGAGGCATCCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp ATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGAGGGGCAGCCTCCAAAATTaGCAGTCGCGGACAGTTCAA +
Preference number: 3 (lower is better)
Translates to: ICSRGQFKPRAVREASVRGSLQN*QSRTVQ
Trigger: TTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC...CCTCACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp CTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACGTGATGAGGAGGCAGTaGTCCAACTCCAGTACCCGC +
Preference number: 3 (lower is better)
Translates to: LSQWRINRLGDGGVGQEDVMRRQ*SNSSTR
Trigger: GCGGGTACTGGAGTTGGACAACTGCCTCCTCATCAC...GTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp TACTTTCCAATCAGGCAACACAGACTCCGAGCTGCTTTTGTTTTTGGTCCCTGGTGGGGGAGTGGTTGTTaGGAAGGGCCAGCCACCATG +
Preference number: 3 (lower is better)
Translates to: YFPIRQHRLRAAFVFGPWWGSGC*EGPATM
Trigger: CATGGTGGCTGGCCCTTCCAAACAACCACTCCCCCA...CCAGGGACCAAAAACAAAAGCAGCTCGGAGTCTGTGTTGCCTGATTGGAAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CAA 90 bp GCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTTCCAGATGTTTCAGCTaGGAACAGAATCTGCTAAGG +
Preference number: 3 (lower is better)
Translates to: ASGSLQNLQSRTVQTQGCSRCFS*EQNLLR
Trigger: CCTTAGCAGATTCTGTTCCAAGCTGAAACATCTGGA...ACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR CCA 72 bp ACTTTTAAGTTTCTCATGAGCTCTGGCCCTTCAGTTTaGGGGAGTGGTTGTTTGGAAGGGCCAGCCACCATG +
Preference number: 3 (lower is better)
Translates to: TFKFLMSSGPSV*GSGCLEGPATM
Trigger: CATGGTGGCTGGCCCTTCCAAACAACCACTCCCCCAAACTGAAGGGCCAGAGCTCATGAGAAACTTAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CAA 90 bp AAAGGTGAAGACCCTGCTCCACCCAGTATAGAGTCCTCTTTTCTTTGGTGTCTCGGCAGCCTCCAAAATTaGCAGTCGCGGACAGTTCAA +
Preference number: 3 (lower is better)
Translates to: KGEDPAPPSIESSFLWCLGSLQN*QSRTVQ
Trigger: TTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC...GAGACACCAAAGAAAAGAGGACTCTATACTGGGTGGAGCAGGGTCTTCACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422741.5
3UTR-3UTR CAA 90 bp AATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGAGTCTATTCTTTGCCAGTaGCTTCCATCCAGGGCTAAG +
Preference number: 3 (lower is better)
Translates to: NLQSRTVQTQGCKRGICESILCQ*LPSRAK
Trigger: CTTAGCCCTGGATGGAAGCAACTGGCAAAGAATAGA...CTCACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435207.5
3UTR CCA 72 bp CCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTaGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTC +
Preference number: 3 (lower is better)
Translates to: PVNAFPNGESTD*VMVESVRKTQV
Trigger: GACCTGAGTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CAA 90 bp GTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCTGGAGAATCAACAGATaGGGTGATGGTGGAGTCGGT +
Preference number: 3 (lower is better)
Translates to: VNAFPNGESTDWVMVESVWRINR*GDGGVG
Trigger: ACCGACTCCACCATCACCCAATCTGTTGATTCTCCA...GACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR TCA 72 bp TTTGGGGGAGTGGTTGTTTGGAAGGGCCAGCCACCATaGACACCTAAGTTTACAATGAAGGTGGTGATGACT +
Preference number: 3 (lower is better)
Translates to: FGGVVVWKGQPP*TPKFTMKVVMT
Trigger: AGTCATCACCACCTTCATTGTAAACTTAGGTGTTCATGGTGGCTGGCCCTTCCAAACAACCACTCCCCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CAA 90 bp GCATCAAGTCCAATAGCTGTGACTGATGATAGGTTGTATCCTGGCTCAAAAGAACTCTGGCCCTTCAGTTaGGGGGAGTGGTTGTTTGGA +
Preference number: 3 (lower is better)
Translates to: ASSPIAVTDDRLYPGSKELWPFS*GEWLFG
Trigger: TCCAAACAACCACTCCCCCAAACTGAAGGGCCAGAG...TTCTTTTGAGCCAGGATACAACCTATCATCAGTCACAGCTATTGGACTTGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484457.6
3UTR-3UTR CAA 90 bp ATGGTCTTTTTGAGGAATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTGGAGAATCAACAGATaGGGTGATGGTGGAGTCGGT +
Preference number: 3 (lower is better)
Translates to: MVFLRNAEYAKGRTFVPRWRINR*GDGGVG
Trigger: ACCGACTCCACCATCACCCAATCTGTTGATTCTCCA...CCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCATTCCTCAAAAAGACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CAA 90 bp GAGTTCACAGTGGGACAGGCTCAGGGCTTGCAGTTTAGGACAGTGAATGGAGAGAGCAGAATCTCATCATaGCTACAAAACAATGATGTG +
Preference number: 3 (lower is better)
Translates to: EFTVGQAQGLQFRTVNGESRISS*LQNNDV
Trigger: CACATCATTGTTTTGTAGCAATGATGAGATTCTGCT...CTCTCCATTCACTGTCCTAAACTGCAAGCCCTGAGCCTGTCCCACTGTGAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435207.5
3UTR-3UTR CAA 90 bp GGCTTTGATTTGATTGTTTCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTTGGGGGAGTGGTTGTTaGGAAGGGCCAGCCACCATG +
Preference number: 3 (lower is better)
Translates to: GFDLIVSQQNKGENYHQSWGSGC*EGPATM
Trigger: CATGGTGGCTGGCCCTTCCAAACAACCACTCCCCCA...ACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGAAACAATCAAATCAAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CAA 90 bp TACTTTCCAATCAGGCAACACAGACTCCGAGCTGCTTTTGTTTTTGGTCCCTGGGCTCATTTATTGAAGTaGCTTCCTGCATCAGTCCTC +
Preference number: 3 (lower is better)
Translates to: YFPIRQHRLRAAFVFGPWAHLLK*LPASVL
Trigger: GAGGACTGATGCAGGAAGCAACTTCAATAAATGAGC...CCAGGGACCAAAAACAAAAGCAGCTCGGAGTCTGTGTTGCCTGATTGGAAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR GCA 72 bp CTCTTAAGAGATCCAGGTTTCTGGCATGGTCCTAGCTaGATTGAGACCACTTGTCATGTGTTAACTGACACA +
Preference number: 3 (lower is better)
Translates to: LLRDPGFWHGPS*IETTCHVLTDT
Trigger: TGTGTCAGTTAACACATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCAGAAACCTGGATCTCTTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CAA 90 bp CGTGCCCAGCCTGCAAACCTGATTTTCTTACAAGAGGTTCTCCTGTTTTGTAAAACACTGATGGTCTTTTaGAGGAATGCTGAGTATGCC +
Preference number: 3 (lower is better)
Translates to: RAQPANLIFLQEVLLFCKTLMVF*RNAEYA
Trigger: GGCATACTCAGCATTCCTCAAAAAGACCATCAGTGT...TTTACAAAACAGGAGAACCTCTTGTAAGAAAATCAGGTTTGCAGGCTGGGCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000484457.6
3UTR TCA 72 bp TTGTTGTGGTGGGAGGGCTCTTTCATCTTTAACAGGTaGATAATGTCAGAAAAACTCAGACTCACCAGGGCT +
Preference number: 3 (lower is better)
Translates to: LLWWEGSFIFNR*IMSEKLRLTRA
Trigger: AGCCCTGGTGAGTCTGAGTTTTTCTGACATTATTCACCTGTTAAAGATGAAAGAGCCCTCCCACCACAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451636.5
3UTR-3UTR CAA 90 bp CTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGTCCAGATGTTTCAGCTaGGAACAGAATCTGCTAAGG +
Preference number: 3 (lower is better)
Translates to: LLPVNAFPNGESTDWVMVSRCFS*EQNLLR
Trigger: CCTTAGCAGATTCTGTTCCAAGCTGAAACATCTGGA...CACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR-3UTR CAA 90 bp GTTATCAGGATGCATTCTTCAAGATCCATCTTCTCCAATTCGTGGCAATTCCGATCCAGATGTTTCAGCTaGGAACAGAATCTGCTAAGG +
Preference number: 3 (lower is better)
Translates to: VIRMHSSRSIFSNSWQFRSRCFS*EQNLLR
Trigger: CCTTAGCAGATTCTGTTCCAAGCTGAAACATCTGGA...TCGGAATTGCCACGAATTGGAGAAGATGGATCTTGAAGAATGCATCCTGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
3UTR TCA 72 bp AGGTTCTCCTGTTTTGTAAATGAGGCCATGGATCATTaGGCATCAAGTCCAATAGCTGTGACTGATGATAGG +
Preference number: 3 (lower is better)
Translates to: RFSCFVNEAMDH*ASSPIAVTDDR
Trigger: CCTATCATCAGTCACAGCTATTGGACTTGATGCTCAATGATCCATGGCCTCATTTACAAAACAGGAGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484457.6
3UTR CCA 72 bp ATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATaGAGAATCAACAGATTGGGTGATGGTGGAGTCGGT +
Preference number: 3 (lower is better)
Translates to: IQKSFTCKCLSQ*RINRLGDGGVG
Trigger: ACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CAA 90 bp TCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAATGGTCCTAGCTGCATaGAGACCACTTGTCATGTGT +
Preference number: 3 (lower is better)
Translates to: SQQNKGENYHQSNCNPYRMVLAA*RPLVMC
Trigger: ACACATGACAAGTGGTCTCAATGCAGCTAGGACCAT...TCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CAA 90 bp ATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTATTTGGAAAATGGTTTaGCTTGGATGTGTCTGCCAT +
Preference number: 3 (lower is better)
Translates to: MLSMPRVELSYLGRYQSLIWKMV*LGCVCH
Trigger: ATGGCAGACACATCCAAGCAAAACCATTTTCCAAAT...AAGAGATTGGTACCTACCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CAA 90 bp ATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACTGGAGAATCAACAGATaGGGTGATGGTGGAGTCGGT +
Preference number: 3 (lower is better)
Translates to: IKVKTITRVTAIHTEVFYWRINR*GDGGVG
Trigger: ACCGACTCCACCATCACCCAATCTGTTGATTCTCCA...GTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
3UTR-3UTR CAA 90 bp GGCTTTGATTTGATTGTTTCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTATTTGGAAAATGGTTTaGCTTGGATGTGTCTGCCAT +
Preference number: 3 (lower is better)
Translates to: GFDLIVSQQNKGENYHQSIWKMV*LGCVCH
Trigger: ATGGCAGACACATCCAAGCAAAACCATTTTCCAAAT...ACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGAAACAATCAAATCAAAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR GCA 72 bp GGGCTTCATAATATCTGTTTAGCAGAATCTCATCATTaGTACAAAACAATGATGTGTGTCTTCCATTCTTCC +
Preference number: 3 (lower is better)
Translates to: GLHNICLAESHH*YKTMMCVFHSS
Trigger: GGAAGAATGGAAGACACACATCATTGTTTTGTAGCAATGATGAGATTCTGCTAAACAGATATTATGAAGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435207.5
CDS-3UTR CCA 90 bp GCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTGCCTCATCACCCCTTaGGCCCAGGCAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: ARVTCWQSYSSRRSRPRQCLITP*AQAAAV
Trigger: GACAGCAGCTGCCTGGGCCCAAGGGGTGATGAGGCA...CTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CCA 90 bp GCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGGCACGGGTAACCTGCTaGCAGTCGTACAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: ARVTCWQSYSSRRSRPRQARVTC*QSYSSR
Trigger: CCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC...CTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp ACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTGCTGTCGGTGGGGTaGCGGGAGCAAAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: TGNLLAVVQLEALQASAVLLSVG*REQSRR
Trigger: ACGCCTACTTTGCTCCCGTCACCCCACCGACAGCAG...AACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp TCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCCCTGCACGGGTAACCTaGTGGCAGTCGTACAGCTCG +
Preference number: 4 (lower is better)
Translates to: SYSSRRSRPRQFSRCSRAPARVT*WQSYSS
Trigger: CGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGG...GGCCCTGGAACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp CCGCTTGATGCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCCTGCGTCAGTCAAATaGGAGCATCGGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PLDACTGNLLAVVQLEALPASVK*EHRAAS
Trigger: GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG...GAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp GTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTTGCCTCATCACCCCTTaGGCCCAGGCAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: VTCWQSYSSRRSRPRQFSCLITP*AQAAAV
Trigger: GACAGCAGCTGCCTGGGCCCAAGGGGTGATGAGGCA...AGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR TCA 90 bp TGCAGCCCCTCAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTAGTAGGCGTGGACTTTaGCATGAGGGAGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: CSPSGAGLSGLDNLAPVPSRRGL*HEGAEP
Trigger: GGGCTCAGCTCCCTCATGTCAAAGTCCACGCCTACT...AGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCCAGGTCGCTGTCCACTTCCTaGCACTGCTGTCGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: QSYSSRRSRPRQFSRCSRSLSTS*HCCRWG
Trigger: ACCCCACCGACAGCAGTGGCAGGAAGTGGACAGCGA...CCTGGAACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp ATGAGGGAGCTGAGCCCGCATCCGCTTGATGCCTGCACGGGTAACCTGCTGGCAGCACGGGTAACCTGCTaGCAGTCGTACAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: MRELSPHPLDACTGNLLAARVTC*QSYSSR
Trigger: CCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC...TGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATGCGGGCTCAGCTCCCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp CCGCTTGATGCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCTGCCACTGCTGTCGGTaGGGTGACGGGAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: PLDACTGNLLAVVQLEALCHCCR*GDGSKV
Trigger: TACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCA...GAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp TCGCTGTCCACTTCCTGCCACTGCTGTCGGTGGGGTGACGGGAGCAAAGTAGGCTGCAGCCTCGCAAGCTaGGCTTCCTCAGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: SLSTSCHCCRWGDGSKVGCSLAS*ASSGIH
Trigger: GTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCA...GCCTACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCAGGAAGTGGACAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGCCATCCTTCGTGATCTaGTCACACCAAGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: ARVTCWQSYSSRRSRPRQPSFVI*SHQERF
Trigger: GAACCTCTCTTGGTGTGATCAGATCACGAAGGATGG...CTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp AGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTGAGAGCCTGTAGCCGGTaGCAGCCCCTGCATATCTGC +
Preference number: 4 (lower is better)
Translates to: RAFRPRQPRTSASMPSFVRACSR*QPLHIC
Trigger: GCAGATATGCAGGGGCTGTCACCGGCTACAGGCTCT...CACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CCGCTTGATGCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCACAACCTCGCACCAGTaGCTCGATGCCATCCTTCGT +
Preference number: 4 (lower is better)
Translates to: PLDACTGNLLAVVQLEALTTSHQ*LDAILR
Trigger: ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGT...GAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp ACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGCAGCCCCTGCATATCTaGACCACACCTTCATCCGTG +
Preference number: 4 (lower is better)
Translates to: TCWQSYSSRRSRPRQFSRQPLHI*TTPSSV
Trigger: CACGGATGAAGGTGTGGTGCAGATATGCAGGGGCTG...CCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GTGTGCAGCCCCTCAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCAGCCCCTGCATATCTaGACCACACCTTCATCCGTG +
Preference number: 4 (lower is better)
Translates to: VCSPSGAGLSGLDNLAPVQPLHI*TTPSSV
Trigger: CACGGATGAAGGTGTGGTGCAGATATGCAGGGGCTG...CACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGCTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp TCGCTGTCCACTTCCTGCCACTGCTGTCGGTGGGGTGACGGGAGCAAAGTAGGCGCCGGTGACAGCCCCTaGATATCTGCACCACACCTT +
Preference number: 4 (lower is better)
Translates to: SLSTSCHCCRWGDGSKVGAGDSP*ISAPHL
Trigger: AAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGC...GCCTACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCAGGAAGTGGACAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp AGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTGCCTGCACGGGTAACCTaGTGGCAGTCGTACAGCTCG +
Preference number: 4 (lower is better)
Translates to: RAFRPRQPRTSASMPSFVPARVT*WQSYSS
Trigger: CGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGG...CACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTCATCCGCTTGATGCCTaGACGGGTAACCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VTCWQSYSSRRSRPRQFSHPLDA*TGNLLA
Trigger: TGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATG...AGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CTAACTGTGTGCAGCCCCTCAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCATCGCTGTCCACTTCCTaGCACTGCTGTCGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LTVCSPSGAGLSGLDNLASLSTS*HCCRWG
Trigger: ACCCCACCGACAGCAGTGGCAGGAAGTGGACAGCGA...TGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGCTGCACACAGTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp CAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTCCTGCGTCAGTCAAATaGGAGCATCGGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QGFQASTTSHQCLDAILRPASVK*EHRAAS
Trigger: GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG...ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp CAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCTGCCACTGCTGTCGGTaGGGTGACGGGAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: QEQGFQASTTSHQCLDAICHCCR*GDGSKV
Trigger: TACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCA...GATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTACAACCTCGCACCAGTaGCTCGATGCCATCCTTCGT +
Preference number: 4 (lower is better)
Translates to: VTCWQSYSSRRSRPRQFSTTSHQ*LDAILR
Trigger: ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGT...AGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTGCCGGTGACAGCCCCTaGATATCTGCACCACACCTT +
Preference number: 4 (lower is better)
Translates to: QGFQASTTSHQCLDAILRAGDSP*ISAPHL
Trigger: AAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGC...ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp ACCCAGGGCTGTAAGAGAGGCATCTGTGAGGTTGCTGCAACCCGAAAGGCAGAGTCCACTTCCTGCCACTaGTGTCGGTGGGGTGACGGG +
Preference number: 4 (lower is better)
Translates to: TQGCKRGICEVAATRKAESTSCH*CRWGDG
Trigger: CCCGTCACCCCACCGACAGCAGTGGCAGGAAGTGGA...CTCTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTCTCTTACAGCCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp AGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCACATCAGTGATGAGGAGGCAGCCTGCGTCAGTCAAATaGGAGCATCGGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RPRQFSRCSRATSVMRRQPASVK*EHRAAS
Trigger: GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG...CTGCCTCCTCATCACTGATGTGGCCCTGGAACACCTAGAGAACTGCCGAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp AGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTGAGCAGGACTGCAAGTTaGGGCTCACAAGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: RAFRPRQPRTSASMPSFVSRTAS*GSQAHG
Trigger: GCCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCT...CACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GAGGTTCAGGTACTCCAGGTTTCGGCAGCCCTCACTGATCCCCTTCAAGGAGCTAGAGCCTGTAGCCGGTaGCAGCCCCTGCATATCTGC +
Preference number: 4 (lower is better)
Translates to: EVQVLQVSAALTDPLQGARACSR*QPLHIC
Trigger: GCAGATATGCAGGGGCTGTCACCGGCTACAGGCTCT...AGCTCCTTGAAGGGGATCAGTGAGGGCTGCCGAAACCTGGAGTACCTGAACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CCGCTTGATGCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCGAATGGAGAGCTGGATaGGTGTGCTGTCGGTTATCA +
Preference number: 4 (lower is better)
Translates to: PLDACTGNLLAVVQLEALEWRAG*VCCRLS
Trigger: TGATAACCGACAGCACACTCATCCAGCTCTCCATTC...GAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTCTGCTGTCGGTGGGGTaGCGGGAGCAAAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: RQSNGSIGQPPKFAVADSLLSVG*REQSRR
Trigger: ACGCCTACTTTGCTCCCGTCACCCCACCGACAGCAG...ACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp AGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCACATCAGTGATGCAGCCCCTGCATATCTaGACCACACCTTCATCCGTG +
Preference number: 4 (lower is better)
Translates to: RRSRPRQFSRCSRATSVMQPLHI*TTPSSV
Trigger: CACGGATGAAGGTGTGGTGCAGATATGCAGGGGCTG...CATCACTGATGTGGCCCTGGAACACCTAGAGAACTGCCGAGGCCTGGAGCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GCCCCTCAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGTACTGTTGCTCAGGTaGAGGATCCCATCATCTGTG +
Preference number: 4 (lower is better)
Translates to: APQEQGFQASTTSHQCLDVLLLR*RIPSSV
Trigger: CACAGATGATGGGATCCTGCACCTGAGCAACAGTAC...ATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp GAGGAGGCAGTTGTCCAACTCCAGTACCCGCAGCCTCTCATGGCCACAGGTACTTGCCACTGCTGTCGGTaGGGTGACGGGAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: EEAVVQLQYPQPLMATGTCHCCR*GDGSKV
Trigger: TACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCA...AGTACCTGTGGCCATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTTGCAGCCTCGCAAGCTaGGCTTCCTCAGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: ASGSLQNLQSRTVQTQGCCSLAS*ASSGIH
Trigger: GTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCA...ACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCGATGCCATCCTTCGTaGTCTGATCACACCAAGAGA +
Preference number: 4 (lower is better)
Translates to: AGSRTARGAPGLGSSLGVRCHPS*SDHTKR
Trigger: TCTCTTGGTGTGATCAGATCACGAAGGATGGCATCG...AACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CCGCTTGATGCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCTGCAGTTTAGGACAGTaGATGGAGAGCTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: PLDACTGNLLAVVQLEALCSLGQ*MESWMS
Trigger: ACTCATCCAGCTCTCCATTCACTGTCCTAAACTGCA...GAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGACTGCTGTCGGTGGGGTaGCGGGAGCAAAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: GSLQNLQSRTVQTQGCKRLLSVG*REQSRR
Trigger: ACGCCTACTTTGCTCCCGTCACCCCACCGACAGCAG...TCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp TCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCGTTTCGGCAGTTCTGTaGAAAGGTCTTCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SYSSRRSRPRQFSRCSRAVSAVL*KGLQGG
Trigger: TCCTCCTTGAAGACCTTTGCACAGAACTGCCGAAAC...GGCCCTGGAACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTGCCGGTGACAGCCCCTaGATATCTGCACCACACCTT +
Preference number: 4 (lower is better)
Translates to: ASGSLQNLQSRTVQTQGCAGDSP*ISAPHL
Trigger: AAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGC...ACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGTACTGTTGCTCAGGTaGAGGATCCCATCATCTGTG +
Preference number: 4 (lower is better)
Translates to: QSYSSRRSRPRQFSRCSRVLLLR*RIPSSV
Trigger: CACAGATGATGGGATCCTGCACCTGAGCAACAGTAC...CCTGGAACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTGTACTGTTGCTCAGGTaGAGGATCCCATCATCTGTG +
Preference number: 4 (lower is better)
Translates to: AGSRTARGAPGLGSSLGVVLLLR*RIPSSV
Trigger: CACAGATGATGGGATCCTGCACCTGAGCAACAGTAC...AACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GGCTGTAAGAGAGGCATCTGTGAGGTTGCTGCAACCCGAAAGGCAGAGAGCCTGCATCCGCTTGATGCCTaGACGGGTAACCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GCKRGICEVAATRKAESLHPLDA*TGNLLA
Trigger: TGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATG...CAGGCTCTCTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTCTCTTACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp TTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTGATCTGCATCCGCTTGATGCCTaGACGGGTAACCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: FQASTTSHQCLDAILRDLHPLDA*TGNLLA
Trigger: TGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATG...CAGATCACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp ACAGTGGGACAGGCTCAGGGCTTGCAGTTTAGGACAGTGAATGGAGAGCTGGATTCCACTTCCTGCCACTaGTGTCGGTGGGGTGACGGG +
Preference number: 4 (lower is better)
Translates to: TVGQAQGLQFRTVNGELDSTSCH*CRWGDG
Trigger: CCCGTCACCCCACCGACAGCAGTGGCAGGAAGTGGA...ATCCAGCTCTCCATTCACTGTCCTAAACTGCAAGCCCTGAGCCTGTCCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
CDS-3UTR GCA 90 bp CTTCAAGGAGGAATCCCCAACACCAATGCAGCCTCGCAAGCTGAGCTTCCTCAGTCGCTGTCCACTTCCTaGCACTGCTGTCGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LQGGIPNTNAASQAELPQSLSTS*HCCRWG
Trigger: ACCCCACCGACAGCAGTGGCAGGAAGTGGACAGCGA...CTGAGGAAGCTCAGCTTGCGAGGCTGCATTGGTGTTGGGGATTCCTCCTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp CTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACACCCGCAGCCTCTCATaGCCACAGGTACTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LRQSNGSIGQPPKFAVADTRSLS*PQVLLL
Trigger: GAGCAACAGTACCTGTGGCCATGAGAGGCTGCGGGT...GTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp ACCCAGGGCTGTAAGAGAGGCATCTGTGAGGTTGCTGCAACCCGAAAGGCAGAGACCCGCAGCCTCTCATaGCCACAGGTACTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: TQGCKRGICEVAATRKAETRSLS*PQVLLL
Trigger: GAGCAACAGTACCTGTGGCCATGAGAGGCTGCGGGT...CTCTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTCTCTTACAGCCCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp TCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCAGAGATCCAGGTTTCTaGCATGGTCCTAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: SYSSRRSRPRQFSRCSRARDPGF*HGPSCI
Trigger: AATGCAGCTAGGACCATGCCAGAAACCTGGATCTCT...GGCCCTGGAACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
3UTR CAA 72 bp AGGTGTTCCAGGGCCACATCAGTGATGAGGAGGCAGTaGTCCAACTCCAGTACCCGCAGCCTCTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: RCSRATSVMRRQ*SNSSTRSLSWP
Trigger: TGGCCATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTCATCACTGATGTGGCCCTGGAACACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTCCATCCTTCGTGATCTaGTCACACCAAGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QGFQASTTSHQCLDAILRPSFVI*SHQERF
Trigger: GAACCTCTCTTGGTGTGATCAGATCACGAAGGATGG...ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GAGGTTCAGGTACTCCAGGTTTCGGCAGCCCTCACTGATCCCCTTCAAGGAGCTAGCAGGACTGCAAGTTaGGGCTCACAAGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: EVQVLQVSAALTDPLQGASRTAS*GSQAHG
Trigger: GCCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCT...AGCTCCTTGAAGGGGATCAGTGAGGGCTGCCGAAACCTGGAGTACCTGAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CGAGCTAAAAGTGTAAAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAGAGCCTGTAGCCGGTaGCAGCCCCTGCATATCTGC +
Preference number: 4 (lower is better)
Translates to: RAKSVKPASVKWEHRAASRACSR*QPLHIC
Trigger: GCAGATATGCAGGGGCTGTCACCGGCTACAGGCTCT...GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTTTACACTTTTAGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CCAAGAGAGGTTCAGGTACTCCAGGTTTCGGCAGCCCTCACTGATCCCCTTCAAAGTAGGCGTGGACTTTaGCATGAGGGAGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: PREVQVLQVSAALTDPLQSRRGL*HEGAEP
Trigger: GGGCTCAGCTCCCTCATGTCAAAGTCCACGCCTACT...TTGAAGGGGATCAGTGAGGGCTGCCGAAACCTGGAGTACCTGAACCTCTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp TTGATGCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGGTTTCGGCAGTTCTGTaGAAAGGTCTTCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LMPARVTCWQSYSSRRSRVSAVL*KGLQGG
Trigger: TCCTCCTTGAAGACCTTTGCACAGAACTGCCGAAAC...CCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACCATCTTCTAACTGTGTaGAGCCCCTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRQSNGSIGQPPKFAVADHLLTV*SPSGAG
Trigger: CCCTGCTCCTGAGGGGCTGCACACAGTTAGAAGATG...GTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTGCCGGTGACAGCCCCTaGATATCTGCACCACACCTT +
Preference number: 4 (lower is better)
Translates to: RQSNGSIGQPPKFAVADSAGDSP*ISAPHL
Trigger: AAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGC...ACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATTTTCCACCACTCGACCCTCCTGCACGGGTAACCTaGTGGCAGTCGTACAGCTCG +
Preference number: 4 (lower is better)
Translates to: ASSGIHRIASRYFPPLDPPARVT*WQSYSS
Trigger: CGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGG...AGGGTCGAGTGGTGGAAAATATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CATATCTGCACCACACCTTCATCCGTGATACGTGAGCAGGACTGCAAGTTGAGGTCCACTTCCTGCCACTaGTGTCGGTGGGGTGACGGG +
Preference number: 4 (lower is better)
Translates to: HICTTPSSVIREQDCKLRSTSCH*CRWGDG
Trigger: CCCGTCACCCCACCGACAGCAGTGGCAGGAAGTGGA...CCTCAACTTGCAGTCCTGCTCACGTATCACGGATGAAGGTGTGGTGCAGATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp CGAGCTAAAAGTGTAAAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCCCTGCGTCAGTCAAATaGGAGCATCGGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RAKSVKPASVKWEHRAASPASVK*EHRAAS
Trigger: GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG...GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTTTACACTTTTAGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp CACATCAGTGATGAGGAGGCAGTTGTCCAACTCCAGTACCCGCAGCCTCTCATGTGCCACTGCTGTCGGTaGGGTGACGGGAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: HISDEEAVVQLQYPQPLMCHCCR*GDGSKV
Trigger: TACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCA...CATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTCATCACTGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp TTGATGCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGAACAGCTTCTTGTTGTaGTGGGAGGGCTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: LMPARVTCWQSYSSRRSRNSFLL*WEGSFI
Trigger: GATGAAAGAGCCCTCCCACCACAACAAGAAGCTGTT...CCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451636.5
3UTR CAA 72 bp TTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGAGGTaGCTGCAACCCGAAAGGCAGAGAGCCTGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: FKPRAVREASVR*LQPERQRACSR
Trigger: CCGGCTACAGGCTCTCTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTCTCTTACAGCCCTGGGTTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GAGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATTTTCCACCACTCGACCTGCAGCCTCGCAAGCTaGGCTTCCTCAGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: ELPQESTASLRDIFHHSTCSLAS*ASSGIH
Trigger: GTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCA...GGTCGAGTGGTGGAAAATATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp AGAGAGGCATCTGTGAGGTTGCTGCAACCCGAAAGGCAGAGAGCCTGTAGCCGGCGATGCCATCCTTCGTaGTCTGATCACACCAAGAGA +
Preference number: 4 (lower is better)
Translates to: REASVRLLQPERQRACSRRCHPS*SDHTKR
Trigger: TCTCTTGGTGTGATCAGATCACGAAGGATGGCATCG...CCGGCTACAGGCTCTCTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CATATCTGCACCACACCTTCATCCGTGATACGTGAGCAGGACTGCAAGTTGAGGAGAGCCTGTAGCCGGTaGCAGCCCCTGCATATCTGC +
Preference number: 4 (lower is better)
Translates to: HICTTPSSVIREQDCKLRRACSR*QPLHIC
Trigger: GCAGATATGCAGGGGCTGTCACCGGCTACAGGCTCT...CCTCAACTTGCAGTCCTGCTCACGTATCACGGATGAAGGTGTGGTGCAGATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTTGCAGTTTAGGACAGTaGATGGAGAGCTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: QGFQASTTSHQCLDAILRCSLGQ*MESWMS
Trigger: ACTCATCCAGCTCTCCATTCACTGTCCTAAACTGCA...ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTCTGCTGTCGGTGGGGTaGCGGGAGCAAAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: QNLQSRTVQTQGCKRGICLLSVG*REQSRR
Trigger: ACGCCTACTTTGCTCCCGTCACCCCACCGACAGCAG...ACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp AAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGCTGCTGTCGGTGGGGTaGCGGGAGCAAAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: KICSRGQFKPRAVREASVLLSVG*REQSRR
Trigger: ACGCCTACTTTGCTCCCGTCACCCCACCGACAGCAG...CACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGCACAAGGCTTTGATTTaGTTGTTTCACAGCAGAATA +
Preference number: 4 (lower is better)
Translates to: ACTGNLLAVVQLEALQASHKALI*LFHSRI
Trigger: TATTCTGCTGTGAAACAATCAAATCAAAGCCTTGTG...CGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR GCA 90 bp TGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAAAAAGATCTATTCTTTaGCAGTTGCTTCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: CTGNLLAVVQLEALQASAKRSIL*QLLPSR
Trigger: CCTGGATGGAAGCAACTGGCAAAGAATAGATCTTTT...TGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421391.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp AAGCTGAGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATTTTCCACCACTTCCACTTCCTGCCACTaGTGTCGGTGGGGTGACGGG +
Preference number: 4 (lower is better)
Translates to: KLSFLRNPPHRFEIFSTTSTSCH*CRWGDG
Trigger: CCCGTCACCCCACCGACAGCAGTGGCAGGAAGTGGA...AGTGGTGGAAAATATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp TCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACTCGCTGTCCACTTCCTaGCACTGCTGTCGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SNGSIGQPPKFAVADSSNSLSTS*HCCRWG
Trigger: ACCCCACCGACAGCAGTGGCAGGAAGTGGACAGCGA...GTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGCCTTGGAAATCTGTaGACATCGGCACAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: VTCWQSYSSRRSRPRQFSSLGNL*TSAQSY
Trigger: GTAACTTTGTGCCGATGTGCACAGATTTCCAAGGCT...AGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421391.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp AAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCTGCCACTGCTGTCGGTaGGGTGACGGGAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: KPASVKWEHRAASKICSRCHCCR*GDGSKV
Trigger: TACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCA...GCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp AAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGTGCCTCATCACCCCTTaGGCCCAGGCAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: KICSRGQFKPRAVREASVCLITP*AQAAAV
Trigger: GACAGCAGCTGCCTGGGCCCAAGGGGTGATGAGGCA...CACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CCA 90 bp ATGAGGGAGCTGAGCCCGCATCCGCTTGATGCCTGCACGGGTAACCTGCTGGCAAGCTTCTTGTTGTGGTaGGAGGGCTCTTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: MRELSPHPLDACTGNLLASFLLW*EGSFIF
Trigger: AAAGATGAAAGAGCCCTCCCACCACAACAAGAAGCT...TGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATGCGGGCTCAGCTCCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451636.5
3UTR CAA 72 bp TCCAGTACCCGCAGCCTCTCATGGCCACAGGTACTGTaGCTCAGGTGCAGGATCCCATCATCTGTGATGAGT +
Preference number: 4 (lower is better)
Translates to: SSTRSLSWPQVL*LRCRIPSSVMS
Trigger: ACTCATCACAGATGATGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCATGAGAGGCTGCGGGTACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp ACACCTTCATCCGTGATACGTGAGCAGGACTGCAAGTTGAGGCTCACAAGCTCATGCAGCCTCGCAAGCTaGGCTTCCTCAGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: TPSSVIREQDCKLRLTSSCSLAS*ASSGIH
Trigger: GTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCA...TGAGCTTGTGAGCCTCAACTTGCAGTCCTGCTCACGTATCACGGATGAAGGTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp TTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCTTCTAGAGGAAAGGATGTGCAGCCTCGCAAGCTaGGCTTCCTCAGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: LGDGGVGQEDSGLLEERMCSLAS*ASSGIH
Trigger: GTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCA...CATCCTTTCCTCTAGAAGACCTGAGTCTTCCTGACCGACTCCACCATCACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp GCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGAGCAGGACTGCAAGTTaGGGCTCACAAGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: AASKICSRGQFKPRAVRESRTAS*GSQAHG
Trigger: GCCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCT...CTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GGCTGTAAGAGAGGCATCTGTGAGGTTGCTGCAACCCGAAAGGCAGAGAGCCTGGAATGGAGAGCTGGATaGGTGTGCTGTCGGTTATCA +
Preference number: 4 (lower is better)
Translates to: GCKRGICEVAATRKAESLEWRAG*VCCRLS
Trigger: TGATAACCGACAGCACACTCATCCAGCTCTCCATTC...CAGGCTCTCTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTCTCTTACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACGAATGGAGAGCTGGATaGGTGTGCTGTCGGTTATCA +
Preference number: 4 (lower is better)
Translates to: LRQSNGSIGQPPKFAVADEWRAG*VCCRLS
Trigger: TGATAACCGACAGCACACTCATCCAGCTCTCCATTC...GTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CATATCTGCACCACACCTTCATCCGTGATACGTGAGCAGGACTGCAAGTTGAGGAGTAGGCGTGGACTTTaGCATGAGGGAGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: HICTTPSSVIREQDCKLRSRRGL*HEGAEP
Trigger: GGGCTCAGCTCCCTCATGTCAAAGTCCACGCCTACT...CCTCAACTTGCAGTCCTGCTCACGTATCACGGATGAAGGTGTGGTGCAGATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp TTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCTTCTAGAGGAAAGGATGAGTAGGCGTGGACTTTaGCATGAGGGAGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LGDGGVGQEDSGLLEERMSRRGL*HEGAEP
Trigger: GGGCTCAGCTCCCTCATGTCAAAGTCCACGCCTACT...CATCCTTTCCTCTAGAAGACCTGAGTCTTCCTGACCGACTCCACCATCACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp TACTTTCCAATCAGGCAACACAGACTCCGAGCTGCTTTTGTTTTTGGTCCCTGGCTGCTGTCGGTGGGGTaGCGGGAGCAAAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: YFPIRQHRLRAAFVFGPWLLSVG*REQSRR
Trigger: ACGCCTACTTTGCTCCCGTCACCCCACCGACAGCAG...CCAGGGACCAAAAACAAAAGCAGCTCGGAGTCTGTGTTGCCTGATTGGAAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp AGAGAGGCATCTGTGAGGTTGCTGCAACCCGAAAGGCAGAGAGCCTGTAGCCGGGTTTCGGCAGTTCTGTaGAAAGGTCTTCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: REASVRLLQPERQRACSRVSAVL*KGLQGG
Trigger: TCCTCCTTGAAGACCTTTGCACAGAACTGCCGAAAC...CCGGCTACAGGCTCTCTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp ATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGAGGACAACCTCGCACCAGTaGCTCGATGCCATCCTTCGT +
Preference number: 4 (lower is better)
Translates to: ICSRGQFKPRAVREASVRTTSHQ*LDAILR
Trigger: ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGT...CCTCACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp ATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGAGGCATCTTCTAACTGTGTaGAGCCCCTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ICSRGQFKPRAVREASVRHLLTV*SPSGAG
Trigger: CCCTGCTCCTGAGGGGCTGCACACAGTTAGAAGATG...CCTCACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACATACGTGAGCAGGACTaGAAGTTGAGGCTCACAAGC +
Preference number: 4 (lower is better)
Translates to: LRQSNGSIGQPPKFAVADIREQD*KLRLTS
Trigger: GCTTGTGAGCCTCAACTTGCAGTCCTGCTCACGTAT...GTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CCGCTTGATGCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCTGTCGGTTATCAGGATaGATTCTTCAAGATCCATCT +
Preference number: 4 (lower is better)
Translates to: PLDACTGNLLAVVQLEALCRLSG*ILQDPS
Trigger: AGATGGATCTTGAAGAATGCATCCTGATAACCGACA...GAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp AGCAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCAGCCTTGGAAATCTGTaGACATCGGCACAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: SRAFRPRQPRTSASMPSFSLGNL*TSAQSY
Trigger: GTAACTTTGTGCCGATGTGCACAGATTTCCAAGGCT...GAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421391.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp GAGGAATCCCCAACACCAATGCAGCCTCGCAAGCTGAGCTTCCTCAGGAATCCATGTTTGAGAAAACCATaGCCGAAGAGCCGCGAGCGA +
Preference number: 4 (lower is better)
Translates to: EESPTPMQPRKLSFLRNPCLRKP*PKSRER
Trigger: TCGCTCGCGGCTCTTCGGCCATGGTTTTCTCAAACA...TGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCATTGGTGTTGGGGATTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp AAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGCCTGCGTCAGTCAAATaGGAGCATCGGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: KICSRGQFKPRAVREASVPASVK*EHRAAS
Trigger: GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG...CACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp ATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGAGGGTGATGAGTTCACAGTaGGACAGGCTCAGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: ICSRGQFKPRAVREASVRVMSSQ*DRLRAC
Trigger: GCAAGCCCTGAGCCTGTCCCACTGTGAACTCATCAC...CCTCACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
CDS-3UTR CCA 90 bp GTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCTGCCTCATCACCCCTTaGGCCCAGGCAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: VNAFPNGESTDWVMVESVCLITP*AQAAAV
Trigger: GACAGCAGCTGCCTGGGCCCAAGGGGTGATGAGGCA...GACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp AGTGTAAAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCTGCAGCCTCGCAAGCTaGGCTTCCTCAGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: SVKPASVKWEHRAASKICCSLAS*ASSGIH
Trigger: GTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCA...GCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTTTACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp AATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCTGCAGCCTCGCAAGCTaGGCTTCCTCAGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: NGESTDWVMVESVRKTQVCSLAS*ASSGIH
Trigger: GTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCA...GACCTGAGTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp CCAAGAGAGGTTCAGGTACTCCAGGTTTCGGCAGCCCTCACTGATCCCCTTCAACCATCCTTCGTGATCTaGTCACACCAAGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PREVQVLQVSAALTDPLQPSFVI*SHQERF
Trigger: GAACCTCTCTTGGTGTGATCAGATCACGAAGGATGG...TTGAAGGGGATCAGTGAGGGCTGCCGAAACCTGGAGTACCTGAACCTCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTCCATCCTTCGTGATCTaGTCACACCAAGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: RQSNGSIGQPPKFAVADSPSFVI*SHQERF
Trigger: GAACCTCTCTTGGTGTGATCAGATCACGAAGGATGG...ACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GCAGCCTCGCAAGCTGAGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATTCCATCCTTCGTGATCTaGTCACACCAAGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: AASQAELPQESTASLRDIPSFVI*SHQERF
Trigger: GAACCTCTCTTGGTGTGATCAGATCACGAAGGATGG...AATATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGAGCCTGTAGCCGGTaGCAGCCCCTGCATATCTGC +
Preference number: 4 (lower is better)
Translates to: VNAFPNGESTDWVMVESVRACSR*QPLHIC
Trigger: GCAGATATGCAGGGGCTGTCACCGGCTACAGGCTCT...GACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp GCTGTAAGAGAGGCATCTGTGAGGTTGCTGCAACCCGAAAGGCAGAGAGCCTGTAATCAACAGATTGGGTaGTGGTGGAGTCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: AVREASVRLLQPERQRACNQQIG*WWSRSG
Trigger: TCCTGACCGACTCCACCATCACCCAATCTGTTGATT...ACAGGCTCTCTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTCTCTTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CACATCAGTGATGAGGAGGCAGTTGTCCAACTCCAGTACCCGCAGCCTCTCATGGGCTATAACACGTGCTaGAAAAGAGCAGACGCACTG +
Preference number: 4 (lower is better)
Translates to: HISDEEAVVQLQYPQPLMGYNTC*KRADAL
Trigger: CAGTGCGTCTGCTCTTTTTCAGCACGTGTTATAGCC...CATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTCATCACTGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421391.5
ENST00000422741.5
CDS-3UTR GCA 90 bp GCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTAAAAGATCTATTCTTTaGCAGTTGCTTCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: AGSRTARGAPGLGSSLGVKRSIL*QLLPSR
Trigger: CCTGGATGGAAGCAACTGGCAAAGAATAGATCTTTT...AACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421391.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAATACGTGAGCAGGACTaGAAGTTGAGGCTCACAAGC +
Preference number: 4 (lower is better)
Translates to: RAASKICSRGQFKPRAVRIREQD*KLRLTS
Trigger: GCTTGTGAGCCTCAACTTGCAGTCCTGCTCACGTAT...TCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp TTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCTTCTAGAGGAAAGGATGCAGCCCCTGCATATCTaGACCACACCTTCATCCGTG +
Preference number: 4 (lower is better)
Translates to: LGDGGVGQEDSGLLEERMQPLHI*TTPSSV
Trigger: CACGGATGAAGGTGTGGTGCAGATATGCAGGGGCTG...CATCCTTTCCTCTAGAAGACCTGAGTCTTCCTGACCGACTCCACCATCACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp CTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACGCCGGTGACAGCCCCTaGATATCTGCACCACACCTT +
Preference number: 4 (lower is better)
Translates to: LSQWRINRLGDGGVGQEDAGDSP*ISAPHL
Trigger: AAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGC...GTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp AATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCCATCCGCTTGATGCCTaGACGGGTAACCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: NGESTDWVMVESVRKTQVHPLDA*TGNLLA
Trigger: TGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATG...GACCTGAGTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp AGCCCGCATCCGCTTGATGCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCATCTTCTCCAATTCGTaGCAATTCCGAGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: SPHPLDACTGNLLAVVQLIFSNS*QFRAKS
Trigger: ACTTTTAGCTCGGAATTGCCACGAATTGGAGAAGAT...GAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATGCGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp GCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTATCTTCTCCAATTCGTaGCAATTCCGAGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: AGSRTARGAPGLGSSLGVIFSNS*QFRAKS
Trigger: ACTTTTAGCTCGGAATTGCCACGAATTGGAGAAGAT...AACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp AATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGAGGTGATGAGTTCACAGTaGGACAGGCTCAGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: NLQSRTVQTQGCKRGICEVMSSQ*DRLRAC
Trigger: GCAAGCCCTGAGCCTGTCCCACTGTGAACTCATCAC...CTCACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
CDS-3UTR CCA 90 bp CTGAGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATTTTCCACCACTCGAGTGATGAGTTCACAGTaGGACAGGCTCAGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LSFLRNPPHRFEIFSTTRVMSSQ*DRLRAC
Trigger: GCAAGCCCTGAGCCTGTCCCACTGTGAACTCATCAC...TCGAGTGGTGGAAAATATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435207.5
CDS-3UTR CCA 90 bp TTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCTTCTAGAGGAAAGGATGGTGATGAGTTCACAGTaGGACAGGCTCAGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LGDGGVGQEDSGLLEERMVMSSQ*DRLRAC
Trigger: GCAAGCCCTGAGCCTGTCCCACTGTGAACTCATCAC...CATCCTTTCCTCTAGAAGACCTGAGTCTTCCTGACCGACTCCACCATCACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp TCTTCTAACTGTGTGCAGCCCCTCAGGAGCAGGGCTTTCAGGCCTCGACAACCTAGATGTTCCAAGCCTTaGAAATCTGTGCACATCGGC +
Preference number: 4 (lower is better)
Translates to: SSNCVQPLRSRAFRPRQPRCSKP*KSVHIG
Trigger: GCCGATGTGCACAGATTTCCAAGGCTTGGAACATCT...AGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGCTGCACACAGTTAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421391.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp AGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCACATCAGTGATGAGGAGGCAGGTGATGAGTTCACAGTaGGACAGGCTCTTACAGAAA +
Preference number: 4 (lower is better)
Translates to: RPRQFSRCSRATSVMRRQVMSSQ*DRLLQK
Trigger: TTTCTGTAAGAGCCTGTCCCACTGTGAACTCATCAC...CTGCCTCCTCATCACTGATGTGGCCCTGGAACACCTAGAGAACTGCCGAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451636.5
CDS-3UTR TCA 90 bp CCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGAGCCTTCATCATTGTTTaGGAAAACCATGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: PASVKWEHRAASKICSRGAFIIV*ENHGRR
Trigger: TCTTCGGCCATGGTTTTCTCAAACAATGATGAAGGC...TCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp AAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCCGATGCCATCCTTCGTaGTCTGATCACACCAAGAGA +
Preference number: 4 (lower is better)
Translates to: KPASVKWEHRAASKICSRRCHPS*SDHTKR
Trigger: TCTCTTGGTGTGATCAGATCACGAAGGATGGCATCG...GCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CCTCAGGAATCCACCGCATCGCTTCGAGATATTTTCCACCACTCGACCCTCTACAATCAACAGATTGGGTaGTGGTGGAGTCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: PQESTASLRDIFHHSTLYNQQIG*WWSRSG
Trigger: TCCTGACCGACTCCACCATCACCCAATCTGTTGATT...GTAGAGGGTCGAGTGGTGGAAAATATCTCGAAGCGATGCGGTGGATTCCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451636.5
CDS-3UTR GCA 90 bp AAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGCATCTTCTAACTGTGTaGAGCCCCTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KICSRGQFKPRAVREASVHLLTV*SPSGAG
Trigger: CCCTGCTCCTGAGGGGCTGCACACAGTTAGAAGATG...CACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GTCTTCAAGGAGGAATCCCCAACACCAATGCAGCCTCGCAAGCTGAGCTTCCTCTGGCATGGTCCTAGCTaGATTGAGACCACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: VFKEESPTPMQPRKLSFLWHGPS*IETTCH
Trigger: ATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA...GAGGAAGCTCAGCTTGCGAGGCTGCATTGGTGTTGGGGATTCCTCCTTGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451636.5
CDS-3UTR GCA 90 bp CGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTACACAGACTCCGAGCTaGTTTTGTTTTTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RQSNGSIGQPPKFAVADSTQTPS*FCFWSL
Trigger: CAGGGACCAAAAACAAAAGCAGCTCGGAGTCTGTGT...ACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422741.5
CDS-3UTR CCA 90 bp CTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACGTGATGAGTTCACAGTaGGACAGGCTCAGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LSQWRINRLGDGGVGQEDVMSSQ*DRLRAC
Trigger: GCAAGCCCTGAGCCTGTCCCACTGTGAACTCATCAC...GTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp TTTAGGACAGTGAATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGGATGCAACCCGCAGCCTCTCATaGCCACAGGTACTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: FRTVNGELDECAVGYQDATRSLS*PQVLLL
Trigger: GAGCAACAGTACCTGTGGCCATGAGAGGCTGCGGGT...TGCATCCTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGTCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp AAAGGTGAAGACCCTGCTCCACCCAGTATAGAGTCCTCTTTTCTTTGGTGTCTCTGCCACTGCTGTCGGTaGGGTGACGGGAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: KGEDPAPPSIESSFLWCLCHCCR*GDGSKV
Trigger: TACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCA...GAGACACCAAAGAAAAGAGGACTCTATACTGGGTGGAGCAGGGTCTTCACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp CTGATCACACCAAGAGAGGTTCAGGTACTCCAGGTTTCGGCAGCCCTCACTGATTGCAGTTTAGGACAGTaGATGGAGAGCTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: LITPREVQVLQVSAALTDCSLGQ*MESWMS
Trigger: ACTCATCCAGCTCTCCATTCACTGTCCTAAACTGCA...ATCAGTGAGGGCTGCCGAAACCTGGAGTACCTGAACCTCTCTTGGTGTGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GCATCAAGTCCAATAGCTGTGACTGATGATAGGTTGTATCCTGGCTCAAAAGAACTGCTGTCGGTGGGGTaGCGGGAGCAAAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: ASSPIAVTDDRLYPGSKELLSVG*REQSRR
Trigger: ACGCCTACTTTGCTCCCGTCACCCCACCGACAGCAG...TTCTTTTGAGCCAGGATACAACCTATCATCAGTCACAGCTATTGGACTTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR TCA 90 bp CAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTATCAAAATGGAATTGTaGATTAAAGTAGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: QGFQASTTSHQCLDAILRIKMEL*IKVGHW
Trigger: CCAGTGGCCTACTTTAATTCACAATTCCATTTTGAT...ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422741.5
CDS-3UTR TCA 90 bp CATATCTGCACCACACCTTCATCCGTGATACGTGAGCAGGACTGCAAGTTGAGGACAGAAACAAAAAGGTaGAGACCCTGCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: HICTTPSSVIREQDCKLRTETKR*RPCSTQ
Trigger: CTGGGTGGAGCAGGGTCTTCACCTTTTTGTTTCTGT...CCTCAACTTGCAGTCCTGCTCACGTATCACGGATGAAGGTGTGGTGCAGATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422741.5
CDS-3UTR GCA 90 bp CCTCGCAAGCTGAGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATTTTCCGTTTCGGCAGTTCTGTaGAAAGGTCTTCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PRKLSFLRNPPHRFEIFSVSAVL*KGLQGG
Trigger: TCCTCCTTGAAGACCTTTGCACAGAACTGCCGAAAC...GGAAAATATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAGCTTGCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp ATGGCCACAGGTACTGTTGCTCAGGTGCAGGATCCCATCATCTGTGATGAGTTCGTACTGTTGCTCAGGTaGAGGATCCCATCATCTGTG +
Preference number: 4 (lower is better)
Translates to: MATGTVAQVQDPIICDEFVLLLR*RIPSSV
Trigger: CACAGATGATGGGATCCTGCACCTGAGCAACAGTAC...GAACTCATCACAGATGATGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp TTCAAGGAGCTGTTTGTAATAGACACACAGGAGGTCAGATCCAGATGTTTCAGCCCTGCACGGGTAACCTaGTGGCAGTCGTACAGCTCG +
Preference number: 4 (lower is better)
Translates to: FKELFVIDTQEVRSRCFSPARVT*WQSYSS
Trigger: CGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGG...GCTGAAACATCTGGATCTGACCTCCTGTGTGTCTATTACAAACAGCTCCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp ATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTTCGCTGTCCACTTCCTaGCACTGCTGTCGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: MLSMPRVELSYLGRYQSLSLSTS*HCCRWG
Trigger: ACCCCACCGACAGCAGTGGCAGGAAGTGGACAGCGA...AAGAGATTGGTACCTACCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp CTGATCACACCAAGAGAGGTTCAGGTACTCCAGGTTTCGGCAGCCCTCACTGATTGGCATGGTCCTAGCTaGATTGAGACCACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LITPREVQVLQVSAALTDWHGPS*IETTCH
Trigger: ATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA...ATCAGTGAGGGCTGCCGAAACCTGGAGTACCTGAACCTCTCTTGGTGTGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTAGCCTTGGAAATCTGTaGACATCGGCACAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: RQSNGSIGQPPKFAVADSSLGNL*TSAQSY
Trigger: GTAACTTTGTGCCGATGTGCACAGATTTCCAAGGCT...ACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421391.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GGTGAAGACCCTGCTCCACCCAGTATAGAGTCCTCTTTTCTTTGGTGTCTCATGTTCCAGCATTTCTCCTaGTTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GEDPAPPSIESSFLWCLMFQHFS*FSLPSS
Trigger: GCTACTCGGGAGGCTGAAGCAGGAGAAATGCTGGAA...CATGAGACACCAAAGAAAAGAGGACTCTATACTGGGTGGAGCAGGGTCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR GCA 90 bp ATGGTCTTTTTGAGGAATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGAGGCGTGAGCCACCGTaGCCAGCCTGCAAACCTGAT +
Preference number: 4 (lower is better)
Translates to: MVFLRNAEYAKGRTFVPRRREPP*PACKPD
Trigger: ATCAGGTTTGCAGGCTGGGCACGGTGGCTCACGCCT...CCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCATTCCTCAAAAAGACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR CCA 90 bp GTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTAAGAGATCCAGGTTTCTGTGCCTCATCACCCCTTaGGCCCAGGCAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: VELSYLGRYQSLKRSRFLCLITP*AQAAAV
Trigger: GACAGCAGCTGCCTGGGCCCAAGGGGTGATGAGGCA...CAGAAACCTGGATCTCTTAAGAGATTGGTACCTACCTAGGTACGAAAGTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp TCAGTGATGAGGAGGCAGTTGTCCAACTCCAGTACCCGCAGCCTCTCATGGCCAAGCTGCTTTTGTTTTTaGTCCCTGGAGGTGTATATG +
Preference number: 4 (lower is better)
Translates to: SVMRRQLSNSSTRSLSWPSCFCF*SLEVYM
Trigger: CATATACACCTCCAGGGACCAAAAACAAAAGCAGCT...TGGCCATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTCATCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422741.5
CDS-3UTR CCA 90 bp GGTGAAGACCCTGCTCCACCCAGTATAGAGTCCTCTTTTCTTTGGTGTCTCATGTTCAGTTTGGGGGAGTaGTTGTTTGGAAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GEDPAPPSIESSFLWCLMFSLGE*LFGRAS
Trigger: GCTGGCCCTTCCAAACAACCACTCCCCCAAACTGAA...CATGAGACACCAAAGAAAAGAGGACTCTATACTGGGTGGAGCAGGGTCTTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp AAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGCGATGCCATCCTTCGTaGTCTGATCACACCAAGAGA +
Preference number: 4 (lower is better)
Translates to: KICSRGQFKPRAVREASVRCHPS*SDHTKR
Trigger: TCTCTTGGTGTGATCAGATCACGAAGGATGGCATCG...CACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGAGAGCCTGTAGCCGGTaGCAGCCCCTGCATATCTGC +
Preference number: 4 (lower is better)
Translates to: LLPVNAFPNGESTDWVMVRACSR*QPLHIC
Trigger: GCAGATATGCAGGGGCTGTCACCGGCTACAGGCTCT...CACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp AGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCACATCAGTGATGAGGAGGCAGCACAAGGCTTTGATTTaGTTGTTTCACAGCAGAATA +
Preference number: 4 (lower is better)
Translates to: RPRQFSRCSRATSVMRRQHKALI*LFHSRI
Trigger: TATTCTGCTGTGAAACAATCAAATCAAAGCCTTGTG...CTGCCTCCTCATCACTGATGTGGCCCTGGAACACCTAGAGAACTGCCGAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR TCA 90 bp ACCCAGGGCTGTAAGAGAGGCATCTGTGAGGTTGCTGCAACCCGAAAGGCAGAGACTGACACAAGGCTTTaGTTTGATTGTTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: TQGCKRGICEVAATRKAETDTRL*FDCFTA
Trigger: TGCTGTGAAACAATCAAATCAAAGCCTTGTGTCAGT...CTCTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTCTCTTACAGCCCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR TCA 90 bp AATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCACAGAAACAAAAAGGTaGAGACCCTGCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: NGESTDWVMVESVRKTQVTETKR*RPCSTQ
Trigger: CTGGGTGGAGCAGGGTCTTCACCTTTTTGTTTCTGT...GACCTGAGTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp ATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTTCTGCCTCAGTCTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: MLSMPRVELSYLGRYQSLSASVS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAGACTGAGGCAGA...AAGAGATTGGTACCTACCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR GCA 90 bp GAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTTGTCGGTTATCAGGATaGATTCTTCAAGATCCATCT +
Preference number: 4 (lower is better)
Translates to: EHRAASKICSRGQFKPRACRLSG*ILQDPS
Trigger: AGATGGATCTTGAAGAATGCATCCTGATAACCGACA...AGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACGTACTGTTGCTCAGGTaGAGGATCCCATCATCTGTG +
Preference number: 4 (lower is better)
Translates to: LSQWRINRLGDGGVGQEDVLLLR*RIPSSV
Trigger: CACAGATGATGGGATCCTGCACCTGAGCAACAGTAC...GTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp GTTTGTAATAGACACACAGGAGGTCAGATCCAGATGTTTCAGCTTGGAACAGAACCTGCACGGGTAACCTaGTGGCAGTCGTACAGCTCG +
Preference number: 4 (lower is better)
Translates to: VCNRHTGGQIQMFQLGTEPARVT*WQSYSS
Trigger: CGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGG...TTCTGTTCCAAGCTGAAACATCTGGATCTGACCTCCTGTGTGTCTATTACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp GTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCTGTTTGAGAAAACCATaGCCGAAGAGCCGCGAGCGA +
Preference number: 4 (lower is better)
Translates to: VNAFPNGESTDWVMVESVCLRKP*PKSRER
Trigger: TCGCTCGCGGCTCTTCGGCCATGGTTTTCTCAAACA...GACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp CAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTTGCCTCATCACCCCTTaGGCCCAGGCAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QKSFTCKCLSQWRINRLGCLITP*AQAAAV
Trigger: GACAGCAGCTGCCTGGGCCCAAGGGGTGATGAGGCA...ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp TGGCATGGTCCTAGCTGCATTGAGACCACTTGTCATGTGTTAACTGACACAAGGCGATGCCATCCTTCGTaGTCTGATCACACCAAGAGA +
Preference number: 4 (lower is better)
Translates to: WHGPSCIETTCHVLTDTRRCHPS*SDHTKR
Trigger: TCTCTTGGTGTGATCAGATCACGAAGGATGGCATCG...CCTTGTGTCAGTTAACACATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
CDS-3UTR TCA 90 bp GCTGTTTGTAATAGACACACAGGAGGTCAGATCCAGATGTTTCAGCTTGGAACAAGCAGGACTGCAAGTTaGGGCTCACAAGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: AVCNRHTGGQIQMFQLGTSRTAS*GSQAHG
Trigger: GCCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCT...TGTTCCAAGCTGAAACATCTGGATCTGACCTCCTGTGTGTCTATTACAAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GTTTGTAATAGACACACAGGAGGTCAGATCCAGATGTTTCAGCTTGGAACAGAAAGTAGGCGTGGACTTTaGCATGAGGGAGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: VCNRHTGGQIQMFQLGTESRRGL*HEGAEP
Trigger: GGGCTCAGCTCCCTCATGTCAAAGTCCACGCCTACT...TTCTGTTCCAAGCTGAAACATCTGGATCTGACCTCCTGTGTGTCTATTACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CATGGCAGTAATTCTGAATGTGTTTCAGAGCTTCATCTTCTAACTGTGTGCAGCAGTAGGCGTGGACTTTaGCATGAGGGAGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: HGSNSECVSELHLLTVCSSRRGL*HEGAEP
Trigger: GGGCTCAGCTCCCTCATGTCAAAGTCCACGCCTACT...GCTGCACACAGTTAGAAGATGAAGCTCTGAAACACATTCAGAATTACTGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACACAAGGCTTTGATTTaGTTGTTTCACAGCAGAATA +
Preference number: 4 (lower is better)
Translates to: PASVKWEHRAASKICSRGHKALI*LFHSRI
Trigger: TATTCTGCTGTGAAACAATCAAATCAAAGCCTTGTG...TCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GGTGAAGACCCTGCTCCACCCAGTATAGAGTCCTCTTTTCTTTGGTGTCTCATGGTTTCGGCAGTTCTGTaGAAAGGTCTTCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GEDPAPPSIESSFLWCLMVSAVL*KGLQGG
Trigger: TCCTCCTTGAAGACCTTTGCACAGAACTGCCGAAAC...CATGAGACACCAAAGAAAAGAGGACTCTATACTGGGTGGAGCAGGGTCTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp ATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTCATCTTCTAACTGTGTaGAGCCCCTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: MLSMPRVELSYLGRYQSLHLLTV*SPSGAG
Trigger: CCCTGCTCCTGAGGGGCTGCACACAGTTAGAAGATG...AAGAGATTGGTACCTACCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
CDS-3UTR GCA 90 bp ACAGTGAATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGGATGCATTCTTCATACGTGAGCAGGACTaGAAGTTGAGGCTCACAAGC +
Preference number: 4 (lower is better)
Translates to: TVNGELDECAVGYQDAFFIREQD*KLRLTS
Trigger: GCTTGTGAGCCTCAACTTGCAGTCCTGCTCACGTAT...GAAGAATGCATCCTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp TTCAAGGAGCTGTTTGTAATAGACACACAGGAGGTCAGATCCAGATGTTTCAGCCAGCCCCTGCATATCTaGACCACACCTTCATCCGTG +
Preference number: 4 (lower is better)
Translates to: FKELFVIDTQEVRSRCFSQPLHI*TTPSSV
Trigger: CACGGATGAAGGTGTGGTGCAGATATGCAGGGGCTG...GCTGAAACATCTGGATCTGACCTCCTGTGTGTCTATTACAAACAGCTCCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp AGGATGCATTCTTCAAGATCCATCTTCTCCAATTCGTGGCAATTCCGAGCTAAAGCCGGTGACAGCCCCTaGATATCTGCACCACACCTT +
Preference number: 4 (lower is better)
Translates to: RMHSSRSIFSNSWQFRAKAGDSP*ISAPHL
Trigger: AAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGC...TTTAGCTCGGAATTGCCACGAATTGGAGAAGATGGATCTTGAAGAATGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGCCTGCACGGGTAACCTaGTGGCAGTCGTACAGCTCG +
Preference number: 4 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVPARVT*WQSYSS
Trigger: CGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGG...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp CAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTCCTGCACGGGTAACCTaGTGGCAGTCGTACAGCTCG +
Preference number: 4 (lower is better)
Translates to: QKSFTCKCLSQWRINRLGPARVT*WQSYSS
Trigger: CGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGG...ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp GTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTAAGAGATCCAGGTTTCTGCATCCGCTTGATGCCTaGACGGGTAACCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VELSYLGRYQSLKRSRFLHPLDA*TGNLLA
Trigger: TGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATG...CAGAAACCTGGATCTCTTAAGAGATTGGTACCTACCTAGGTACGAAAGTTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp AACTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCCACTTCCTGCCACTaGTGTCGGTGGGGTGACGGG +
Preference number: 4 (lower is better)
Translates to: NCNPYRSLLPVNAFPNGESTSCH*CRWGDG
Trigger: CCCGTCACCCCACCGACAGCAGTGGCAGGAAGTGGA...TTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp CTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACTGGCATGGTCCTAGCTaGATTGAGACCACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LSQWRINRLGDGGVGQEDWHGPS*IETTCH
Trigger: ATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA...GTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp AGGACAGTGAATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGGATGCATTCTGGCATGGTCCTAGCTaGATTGAGACCACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RTVNGELDECAVGYQDAFWHGPS*IETTCH
Trigger: ATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA...GAATGCATCCTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGTCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CGAGCTAAAAGTGTAAAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCGTTTCGGCAGTTCTGTaGAAAGGTCCACATTACAAA +
Preference number: 4 (lower is better)
Translates to: RAKSVKPASVKWEHRAASVSAVL*KGPHYK
Trigger: TTTGTAATGTGGACCTTTGCACAGAACTGCCGAAAC...GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTTTACACTTTTAGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432809.5
CDS-3UTR GCA 90 bp AAAGGTGAAGACCCTGCTCCACCCAGTATAGAGTCCTCTTTTCTTTGGTGTCTCCCACCGTGCCCAGCCTaGAAACCTGATTTTCTTACA +
Preference number: 4 (lower is better)
Translates to: KGEDPAPPSIESSFLWCLPPCPA*KPDFLT
Trigger: TGTAAGAAAATCAGGTTTGCAGGCTGGGCACGGTGG...GAGACACCAAAGAAAAGAGGACTCTATACTGGGTGGAGCAGGGTCTTCACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR CCA 90 bp CTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGACCCGCAGCCTCTCATaGCCACAGGTACTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LLPVNAFPNGESTDWVMVTRSLS*PQVLLL
Trigger: GAGCAACAGTACCTGTGGCCATGAGAGGCTGCGGGT...CACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGGCACGGGTAACCTGCTaGCAGTCGTACAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVARVTC*QSYSSR
Trigger: CCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp CTAAGATGTTCCAAGCCTTGGAAATCTGTGCACATCGGCACAAAGTTACTATATGCACGGGTAACCTGCTaGCAGTCGTACAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LRCSKPWKSVHIGTKLLYARVTC*QSYSSR
Trigger: CCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC...ATATAGTAACTTTGTGCCGATGTGCACAGATTTCCAAGGCTTGGAACATCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435207.5
CDS-3UTR CCA 90 bp TCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGCACGGGTAACCTGCTaGCAGTCGTACAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: SFTCKCLSQWRINRLGDGARVTC*QSYSSR
Trigger: CCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC...ACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp AAAAATGTGTTATGTGCTGTAGCATACACCAGAGCTTCTACTTTCCAATCAGGCGCACGGGTAACCTGCTaGCAGTCGTACAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: KNVLCAVAYTRASTFQSGARVTC*QSYSSR
Trigger: CCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC...GCCTGATTGGAAAGTAGAAGCTCTGGTGTATGCTACAGCACATAACACATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp AGTGTAAAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGAGATCCAGGTTTCTaGCATGGTCCTAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: SVKPASVKWEHRAASKICRDPGF*HGPSCI
Trigger: AATGCAGCTAGGACCATGCCAGAAACCTGGATCTCT...GCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTTTACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CCA 90 bp TGGCATGGTCCTAGCTGCATTGAGACCACTTGTCATGTGTTAACTGACACAAGGTCTGGCCCTTCAGTTTaGGGGAGTGGTTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: WHGPSCIETTCHVLTDTRSGPSV*GSGCLE
Trigger: TTCCAAACAACCACTCCCCCAAACTGAAGGGCCAGA...CCTTGTGTCAGTTAACACATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp TCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGCCACCTCCGCCTCCTaGGTTCCAGCATTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SFTCKCLSQWRINRLGDGATSAS*VPAFLL
Trigger: CAGGAGAAATGCTGGAACCCAGGAGGCGGAGGTGGC...ACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484457.6
3UTR CAA 72 bp ACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATaGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: TCKCLSQWRINR*GDGGVGQEDSG
Trigger: ACCTGAGTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp AAGCTGAGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATTTTCCACCACTGCCTTCATCATTGTTTaGGAAAACCATGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: KLSFLRNPPHRFEIFSTTAFIIV*ENHGRR
Trigger: TCTTCGGCCATGGTTTTCTCAAACAATGATGAAGGC...AGTGGTGGAAAATATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAGTAGGCGTGGACTTTaGCATGAGGGAGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LQSIQKSFTCKCLSQWRISRRGL*HEGAEP
Trigger: GGGCTCAGCTCCCTCATGTCAAAGTCCACGCCTACT...GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp GTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAAGGGCCAGCCACCATaGACACCTAAGTTTACAATG +
Preference number: 4 (lower is better)
Translates to: VNAFPNGESTDWVMVESVKGQPP*TPKFTM
Trigger: CATTGTAAACTTAGGTGTTCATGGTGGCTGGCCCTT...GACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp GTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCGTTTCGGCAGTTCTGTaGAAAGGTCTTCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VNAFPNGESTDWVMVESVVSAVL*KGLQGG
Trigger: TCCTCCTTGAAGACCTTTGCACAGAACTGCCGAAAC...GACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp CATGGCAGTAATTCTGAATGTGTTTCAGAGCTTCATCTTCTAACTGTGTGCAGCCAGCCCCTGCATATCTaGACCACACCTTCATCCGTG +
Preference number: 4 (lower is better)
Translates to: HGSNSECVSELHLLTVCSQPLHI*TTPSSV
Trigger: CACGGATGAAGGTGTGGTGCAGATATGCAGGGGCTG...GCTGCACACAGTTAGAAGATGAAGCTCTGAAACACATTCAGAATTACTGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GAGTTCACAGTGGGACAGGCTCAGGGCTTGCAGTTTAGGACAGTGAATGGAGAGTGTCGGTTATCAGGATaGATTCTTCAAGATCCATCT +
Preference number: 4 (lower is better)
Translates to: EFTVGQAQGLQFRTVNGECRLSG*ILQDPS
Trigger: AGATGGATCTTGAAGAATGCATCCTGATAACCGACA...CTCTCCATTCACTGTCCTAAACTGCAAGCCCTGAGCCTGTCCCACTGTGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
CDS-3UTR GCA 90 bp CAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTCCACTTCCTGCCACTaGTGTCGGTGGGGTGACGGG +
Preference number: 4 (lower is better)
Translates to: QNKGENYHQSNCNPYRSLSTSCH*CRWGDG
Trigger: CCCGTCACCCCACCGACAGCAGTGGCAGGAAGTGGA...AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp TCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGATCGCTGTCCACTTCCTaGCACTGCTGTCGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SQQNKGENYHQSNCNPYRSLSTS*HCCRWG
Trigger: ACCCCACCGACAGCAGTGGCAGGAAGTGGACAGCGA...TCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp CCAAGAGAGGTTCAGGTACTCCAGGTTTCGGCAGCCCTCACTGATCCCCTTCAATCTTTTACCTGTAAATaGCTTTCCCAATGGAGAATC +
Preference number: 4 (lower is better)
Translates to: PREVQVLQVSAALTDPLQSFTCK*LSQWRI
Trigger: GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGA...TTGAAGGGGATCAGTGAGGGCTGCCGAAACCTGGAGTACCTGAACCTCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR GCA 90 bp AATGCAGCCTCGCAAGCTGAGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATTTGTTATCCTGTCCCTaGTCCACATTACAAAAAGAA +
Preference number: 4 (lower is better)
Translates to: NAASQAELPQESTASLRDLLSCP*STLQKE
Trigger: TTCTTTTTGTAATGTGGAGCAGGGACAGGATAACAA...ATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435207.5
CDS-3UTR CCA 90 bp CGAGCTAAAAGTGTAAAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCATCTTCTCCAATTCGTaGCAATTCCGAGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: RAKSVKPASVKWEHRAASIFSNS*QFRAKS
Trigger: ACTTTTAGCTCGGAATTGCCACGAATTGGAGAAGAT...GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTTTACACTTTTAGCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp GATTTTTGTGCATCCATTGAGGTTCAAATGTTCAATGTTTCGGCAGTTCTGTGCACCCGCAGCCTCTCATaGCCACAGGTACTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: DFCASIEVQMFNVSAVLCTRSLS*PQVLLL
Trigger: GAGCAACAGTACCTGTGGCCATGAGAGGCTGCGGGT...GCACAGAACTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp TCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAGCACGGGTAACCTGCTaGCAGTCGTACAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: SQQNKGENYHQSNCNPYRARVTC*QSYSSR
Trigger: CCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC...TCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp TGGCATGGTCCTAGCTGCATTGAGACCACTTGTCATGTGTTAACTGACACAAGGAGATGTTCCAAGCCTTaGAAATCTGTGCACATCGGC +
Preference number: 4 (lower is better)
Translates to: WHGPSCIETTCHVLTDTRRCSKP*KSVHIG
Trigger: GCCGATGTGCACAGATTTCCAAGGCTTGGAACATCT...CCTTGTGTCAGTTAACACATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp CTAAGATGTTCCAAGCCTTGGAAATCTGTGCACATCGGCACAAAGTTACTATATAGCAGGACTGCAAGTTaGGGCTCACAAGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: LRCSKPWKSVHIGTKLLYSRTAS*GSQAHG
Trigger: GCCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCT...ATATAGTAACTTTGTGCCGATGTGCACAGATTTCCAAGGCTTGGAACATCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435207.5
CDS-3UTR TCA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGAGCAGGACTGCAAGTTaGGGCTCACAAGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVSRTAS*GSQAHG
Trigger: GCCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCT...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp TCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACACTGACACAAGGCTTTaGTTTGATTGTTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: SNGSIGQPPKFAVADSSNTDTRL*FDCFTA
Trigger: TGCTGTGAAACAATCAAATCAAAGCCTTGTGTCAGT...GTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR TCA 90 bp ATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTACAGAAACAAAAAGGTaGAGACCCTGCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: MLSMPRVELSYLGRYQSLTETKR*RPCSTQ
Trigger: CTGGGTGGAGCAGGGTCTTCACCTTTTTGTTTCTGT...AAGAGATTGGTACCTACCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp CTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCACAACCTCGCACCAGTaGCTCGATGCCATCCTTCGT +
Preference number: 4 (lower is better)
Translates to: LQSIQKSFTCKCLSQWRITTSHQ*LDAILR
Trigger: ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGT...GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
CDS-3UTR GCA 90 bp TCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACTGTCGGTTATCAGGATaGATTCTTCAAGATCCATCT +
Preference number: 4 (lower is better)
Translates to: SNGSIGQPPKFAVADSSNCRLSG*ILQDPS
Trigger: AGATGGATCTTGAAGAATGCATCCTGATAACCGACA...GTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp AAGGTCTTCAAGGAGGAATCCCCAACACCAATGCAGCCTCGCAAGCTGAGCTTCTATCACCAGAGTAACTaGAATCCATACAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: KVFKEESPTPMQPRKLSFYHQSN*NPYRSL
Trigger: AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATA...GAAGCTCAGCTTGCGAGGCTGCATTGGTGTTGGGGATTCCTCCTTGAAGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422741.5
ENST00000451636.5
CDS-3UTR CCA 90 bp CAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTCCTGCGTCAGTCAAATaGGAGCATCGGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QNKGENYHQSNCNPYRSLPASVK*EHRAAS
Trigger: GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG...AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp TCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGAACCCGCAGCCTCTCATaGCCACAGGTACTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: SIQKSFTCKCLSQWRINRTRSLS*PQVLLL
Trigger: GAGCAACAGTACCTGTGGCCATGAGAGGCTGCGGGT...TCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp GTATCCTGGCTCAAAAGAAATCAATCATGTATAGAAGGCTCTGGTGGTTTGTTTACCCGCAGCCTCTCATaGCCACAGGTACTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: VSWLKRNQSCIEGSGGLFTRSLS*PQVLLL
Trigger: GAGCAACAGTACCTGTGGCCATGAGAGGCTGCGGGT...AAACAAACCACCAGAGCCTTCTATACATGATTGATTTCTTTTGAGCCAGGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR CCA 90 bp AACTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATGCCACTGCTGTCGGTaGGGTGACGGGAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: NCNPYRSLLPVNAFPNGECHCCR*GDGSKV
Trigger: TACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCA...TTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp GAGTTCACAGTGGGACAGGCTCAGGGCTTGCAGTTTAGGACAGTGAATGGAGAGATTAAAGTAGGCCACTaGCTTAAGTATCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: EFTVGQAQGLQFRTVNGEIKVGH*LKYQVE
Trigger: TTCTACCTGATACTTAAGCCAGTGGCCTACTTTAAT...CTCTCCATTCACTGTCCTAAACTGCAAGCCCTGAGCCTGTCCCACTGTGAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422741.5
CDS-3UTR CCA 90 bp CCTCGCAAGCTGAGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATTTTCCCCTTTAAAAAGCCCATaGAGTGCACATTACAAAAAG +
Preference number: 4 (lower is better)
Translates to: PRKLSFLRNPPHRFEIFSPLKSP*SAHYKK
Trigger: CTTTTTGTAATGTGCACTCCATGGGCTTTTTAAAGG...GGAAAATATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAGCTTGCGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000425973.5
CDS-3UTR CCA 90 bp ATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTTCTGGCCCTTCAGTTTaGGGGAGTGGTTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: MLSMPRVELSYLGRYQSLSGPSV*GSGCLE
Trigger: TTCCAAACAACCACTCCCCCAAACTGAAGGGCCAGA...AAGAGATTGGTACCTACCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp GTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTAAGAGATCCAGGTTTCTGCTGGATGGAGTGCAATaGCACAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VELSYLGRYQSLKRSRFLLDGVQ*HNLGSL
Trigger: CAGTGAGCCGAGATTGTGCCATTGCACTCCATCCAG...CAGAAACCTGGATCTCTTAAGAGATTGGTACCTACCTAGGTACGAAAGTTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR CCA 90 bp GCATCAAGTCCAATAGCTGTGACTGATGATAGGTTGTATCCTGGCTCAAAAGAATGTTGTCTCCTGGGCTaGATGGAGTGCAATGGCACA +
Preference number: 4 (lower is better)
Translates to: ASSPIAVTDDRLYPGSKECCLLG*MECNGT
Trigger: TGTGCCATTGCACTCCATCCAGCCCAGGAGACAACA...TTCTTTTGAGCCAGGATACAACCTATCATCAGTCACAGCTATTGGACTTGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484457.6
3UTR CAA 72 bp GACAGGCTCTTACAGAAAGAGAACCCAAACAGCTTCTaGTTGTGGTGGGAGGGCTCTTTCATCTTTAACAGG +
Preference number: 4 (lower is better)
Translates to: DRLLQKENPNSF*LWWEGSFIFNR
Trigger: CCTGTTAAAGATGAAAGAGCCCTCCCACCACAACAAGAAGCTGTTTGGGTTCTCTTTCTGTAAGAGCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451636.5
CDS-3UTR TCA 90 bp CTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGCCATCCTTCGTGATCTaGTCACACCAAGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLPVNAFPNGESTDWVMVPSFVI*SHQERF
Trigger: GAACCTCTCTTGGTGTGATCAGATCACGAAGGATGG...CACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
CDS-3UTR TCA 90 bp GTTTGTAATAGACACACAGGAGGTCAGATCCAGATGTTTCAGCTTGGAACAGAAGAATGGAGAGCTGGATaGGTGTGCTGTCGGTTATCA +
Preference number: 4 (lower is better)
Translates to: VCNRHTGGQIQMFQLGTEEWRAG*VCCRLS
Trigger: TGATAACCGACAGCACACTCATCCAGCTCTCCATTC...TTCTGTTCCAAGCTGAAACATCTGGATCTGACCTCCTGTGTGTCTATTACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTAAGAGATCCAGGTTTCTGAATCAACAGATTGGGTaGTGGTGGAGTCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: VELSYLGRYQSLKRSRFLNQQIG*WWSRSG
Trigger: TCCTGACCGACTCCACCATCACCCAATCTGTTGATT...CAGAAACCTGGATCTCTTAAGAGATTGGTACCTACCTAGGTACGAAAGTTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp TGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAACCTCGCACCAGTaGCTCGATGCCATCCTTCGT +
Preference number: 4 (lower is better)
Translates to: CNPYRSLLPVNAFPNGESTTSHQ*LDAILR
Trigger: ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGT...TGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
CDS-3UTR GCA 90 bp CATGGCAGTAATTCTGAATGTGTTTCAGAGCTTCATCTTCTAACTGTGTGCAGCATACGTGAGCAGGACTaGAAGTTGAGGCTCACAAGC +
Preference number: 4 (lower is better)
Translates to: HGSNSECVSELHLLTVCSIREQD*KLRLTS
Trigger: GCTTGTGAGCCTCAACTTGCAGTCCTGCTCACGTAT...GCTGCACACAGTTAGAAGATGAAGCTCTGAAACACATTCAGAATTACTGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp AAGAATGAACCACAGCAGAGAGTAGGGTCATTTTATCAGATTTCAGATAACATCCATCCGCTTGATGCCTaGACGGGTAACCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KNEPQQRVGSFYQISDNIHPLDA*TGNLLA
Trigger: TGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATG...GATGTTATCTGAAATCTGATAAAATGACCCTACTCTCTGCTGTGGTTCATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp ATGGCCACAGGTACTGTTGCTCAGGTGCAGGATCCCATCATCTGTGATGAGTTCTCTTTTACCTGTAAATaGCTTTCCCAATGGAGAATC +
Preference number: 4 (lower is better)
Translates to: MATGTVAQVQDPIICDEFSFTCK*LSQWRI
Trigger: GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGA...GAACTCATCACAGATGATGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CCA 90 bp GAGTGTGCTGTCGGTTATCAGGATGCATTCTTCAAGATCCATCTTCTCCAATTCAGATGTTCCAAGCCTTaGAAATCTGTGCACATCGGC +
Preference number: 4 (lower is better)
Translates to: ECAVGYQDAFFKIHLLQFRCSKP*KSVHIG
Trigger: GCCGATGTGCACAGATTTCCAAGGCTTGGAACATCT...GAATTGGAGAAGATGGATCTTGAAGAATGCATCCTGATAACCGACAGCACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421391.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGGTTTCTCATGAGCTCTaGCCCTTCAGTTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVVSHEL*PFSLGE
Trigger: CTCCCCCAAACTGAAGGGCCAGAGCTCATGAGAAAC...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR CAA 72 bp CAATCAGGCAACACAGACTCCGAGCTGCTTTTGTTTTaGGTCCCTGGAGGTGTATATGACAAGTTGACAGAA +
Preference number: 4 (lower is better)
Translates to: QSGNTDSELLLF*VPGGVYDKLTE
Trigger: TTCTGTCAACTTGTCATATACACCTCCAGGGACCAAAAACAAAAGCAGCTCGGAGTCTGTGTTGCCTGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
3UTR CAA 72 bp ACTTTCCAATCAGGCAACACAGACTCCGAGCTGCTTTaGTTTTTGGTCCCTGGAGGTGTATATGACAAGTTG +
Preference number: 4 (lower is better)
Translates to: TFQSGNTDSELL*FLVPGGVYDKL
Trigger: CAACTTGTCATATACACCTCCAGGGACCAAAAACAAAAGCAGCTCGGAGTCTGTGTTGCCTGATTGGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
3UTR CAA 72 bp GTGAATAATGTCAGAAAAACTCAGACTCACCAGGGCTaGCAGTTTAGGACAGTGAATGGAGAGCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: VNNVRKTQTHQG*QFRTVNGELDE
Trigger: CTCATCCAGCTCTCCATTCACTGTCCTAAACTGCAAGCCCTGGTGAGTCTGAGTTTTTCTGACATTATTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451636.5
CDS-3UTR TCA 90 bp GCTGTTTGTAATAGACACACAGGAGGTCAGATCCAGATGTTTCAGCTTGGAACAGCCTTCATCATTGTTTaGGAAAACCATGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: AVCNRHTGGQIQMFQLGTAFIIV*ENHGRR
Trigger: TCTTCGGCCATGGTTTTCTCAAACAATGATGAAGGC...TGTTCCAAGCTGAAACATCTGGATCTGACCTCCTGTGTGTCTATTACAAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp AAAAATGTGTTATGTGCTGTAGCATACACCAGAGCTTCTACTTTCCAATCAGGCCGATGCCATCCTTCGTaGTCTGATCACACCAAGAGA +
Preference number: 4 (lower is better)
Translates to: KNVLCAVAYTRASTFQSGRCHPS*SDHTKR
Trigger: TCTCTTGGTGTGATCAGATCACGAAGGATGGCATCG...GCCTGATTGGAAAGTAGAAGCTCTGGTGTATGCTACAGCACATAACACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422741.5
ENST00000484457.6
CDS-3UTR TCA 90 bp CAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTAGCAGGACTGCAAGTTaGGGCTCACAAGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: QNKGENYHQSNCNPYRSLSRTAS*GSQAHG
Trigger: GCCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCT...AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp AAAAATGTGTTATGTGCTGTAGCATACACCAGAGCTTCTACTTTCCAATCAGGCGAATGGAGAGCTGGATaGGTGTGCTGTCGGTTATCA +
Preference number: 4 (lower is better)
Translates to: KNVLCAVAYTRASTFQSGEWRAG*VCCRLS
Trigger: TGATAACCGACAGCACACTCATCCAGCTCTCCATTC...GCCTGATTGGAAAGTAGAAGCTCTGGTGTATGCTACAGCACATAACACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp GTTATCAGGATGCATTCTTCAAGATCCATCTTCTCCAATTCGTGGCAATTCCGATGCAGTTTAGGACAGTaGATGGAGAGCTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: VIRMHSSRSIFSNSWQFRCSLGQ*MESWMS
Trigger: ACTCATCCAGCTCTCCATTCACTGTCCTAAACTGCA...TCGGAATTGCCACGAATTGGAGAAGATGGATCTTGAAGAATGCATCCTGATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR TCA 90 bp GATTTTTGTGCATCCATTGAGGTTCAAATGTTCAATGTTTCGGCAGTTCTGTGCAATCAACAGATTGGGTaGTGGTGGAGTCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: DFCASIEVQMFNVSAVLCNQQIG*WWSRSG
Trigger: TCCTGACCGACTCCACCATCACCCAATCTGTTGATT...GCACAGAACTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422741.5
ENST00000451636.5
CDS-3UTR TCA 90 bp CTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAATCAACAGATTGGGTaGTGGTGGAGTCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LQSIQKSFTCKCLSQWRINQQIG*WWSRSG
Trigger: TCCTGACCGACTCCACCATCACCCAATCTGTTGATT...GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp TACTTTCCAATCAGGCAACACAGACTCCGAGCTGCTTTTGTTTTTGGTCCCTGGACTGACACAAGGCTTTaGTTTGATTGTTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: YFPIRQHRLRAAFVFGPWTDTRL*FDCFTA
Trigger: TGCTGTGAAACAATCAAATCAAAGCCTTGTGTCAGT...CCAGGGACCAAAAACAAAAGCAGCTCGGAGTCTGTGTTGCCTGATTGGAAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp GATTTTTGTGCATCCATTGAGGTTCAAATGTTCAATGTTTCGGCAGTTCTGTGCGGCTATAACACGTGCTaGAAAAGAGCAGACGCACTG +
Preference number: 4 (lower is better)
Translates to: DFCASIEVQMFNVSAVLCGYNTC*KRADAL
Trigger: CAGTGCGTCTGCTCTTTTTCAGCACGTGTTATAGCC...GCACAGAACTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422741.5
CDS-3UTR GCA 90 bp CAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTCATCTTCTAACTGTGTaGAGCCCCTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QNKGENYHQSNCNPYRSLHLLTV*SPSGAG
Trigger: CCCTGCTCCTGAGGGGCTGCACACAGTTAGAAGATG...AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
CDS-3UTR GCA 90 bp AAAAATGTGTTATGTGCTGTAGCATACACCAGAGCTTCTACTTTCCAATCAGGCATACGTGAGCAGGACTaGAAGTTGAGGCTCACAAGC +
Preference number: 4 (lower is better)
Translates to: KNVLCAVAYTRASTFQSGIREQD*KLRLTS
Trigger: GCTTGTGAGCCTCAACTTGCAGTCCTGCTCACGTAT...GCCTGATTGGAAAGTAGAAGCTCTGGTGTATGCTACAGCACATAACACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp GAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCGGTGACAGCCCCTaGATATCTGCACCACACCTT +
Preference number: 4 (lower is better)
Translates to: ENYHQSNCNPYRSLLPVNAGDSP*ISAPHL
Trigger: AAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGC...ATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp AAGTGTAAAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGTGTCGGTTATCAGGATaGATTCTTCAAGATCCATCT +
Preference number: 4 (lower is better)
Translates to: KCKTCVSQMGASGSLQNLCRLSG*ILQDPS
Trigger: AGATGGATCTTGAAGAATGCATCCTGATAACCGACA...CAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTTTACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp AGTGTAAAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCTATCACCAGAGTAACTaGAATCCATACAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SVKPASVKWEHRAASKICYHQSN*NPYRSL
Trigger: AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATA...GCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCATTGAAGTTGCTTCCTaGATCAGTCCTCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LQSIQKSFTCKCLSQWRIIEVAS*ISPPPP
Trigger: TGGGGGAGGAGGACTGATGCAGGAAGCAACTTCAAT...GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATTGAAGTTGCTTCCTaGATCAGTCCTCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVIEVAS*ISPPPP
Trigger: TGGGGGAGGAGGACTGATGCAGGAAGCAACTTCAAT...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp TCTTCAAGATCCATCTTCTCCAATTCGTGGCAATTCCGAGCTAAAAGTGTAAAATGTTTGAGAAAACCATaGCCGAAGAGCCGCGAGCGA +
Preference number: 4 (lower is better)
Translates to: SSRSIFSNSWQFRAKSVKCLRKP*PKSRER
Trigger: TCGCTCGCGGCTCTTCGGCCATGGTTTTCTCAAACA...TTTTACACTTTTAGCTCGGAATTGCCACGAATTGGAGAAGATGGATCTTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp TCAGTGATTTTTGTGCATCCATTGAGGTTCAAATGTTCAATGTTTCGGCAGTTCTGTTTGAGAAAACCATaGCCGAAGAGCCGCGAGCGA +
Preference number: 4 (lower is better)
Translates to: SVIFVHPLRFKCSMFRQFCLRKP*PKSRER
Trigger: TCGCTCGCGGCTCTTCGGCCATGGTTTTCTCAAACA...GAACTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAAATCACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000422741.5
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp AAAGGTGAAGACCCTGCTCCACCCAGTATAGAGTCCTCTTTTCTTTGGTGTCTCATCTTCTCCAATTCGTaGCAATTCCGAGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: KGEDPAPPSIESSFLWCLIFSNS*QFRAKS
Trigger: ACTTTTAGCTCGGAATTGCCACGAATTGGAGAAGAT...GAGACACCAAAGAAAAGAGGACTCTATACTGGGTGGAGCAGGGTCTTCACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp ACAGTGAATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGGATGCATTCTTCAAATGCCTTTCCCAATaGAGAATCAACAGATTGGGT +
Preference number: 4 (lower is better)
Translates to: TVNGELDECAVGYQDAFFKCLSQ*RINRLG
Trigger: ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTT...GAAGAATGCATCCTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CCA 90 bp GGTGAAGACCCTGCTCCACCCAGTATAGAGTCCTCTTTTCTTTGGTGTCTCATGTTCTTTGGTGTCTCATaGAAACCTATTAACATGCCT +
Preference number: 4 (lower is better)
Translates to: GEDPAPPSIESSFLWCLMFFGVS*KPINMP
Trigger: AGGCATGTTAATAGGTTTCCATGAGACACCAAAGAA...CATGAGACACCAAAGAAAAGAGGACTCTATACTGGGTGGAGCAGGGTCTTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp AACTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATTCAGTTTGGGGGAGTaGTTGTTTGGAAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: NCNPYRSLLPVNAFPNGEFSLGE*LFGRAS
Trigger: GCTGGCCCTTCCAAACAACCACTCCCCCAAACTGAA...TTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR CAA 72 bp ACTGAAGCAAGTCTGTTATATGCTCATTTATTGAAGTaGCTTCCTGCATCAGTCCTCCTCCCCCATCATCTC +
Preference number: 4 (lower is better)
Translates to: TEASLLYAHLLK*LPASVLLPHHL
Trigger: GAGATGATGGGGGAGGAGGACTGATGCAGGAAGCAACTTCAATAAATGAGCATATAACAGACTTGCTTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR TCA 90 bp CTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGCCTTCATCATTGTTTaGGAAAACCATGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: LLPVNAFPNGESTDWVMVAFIIV*ENHGRR
Trigger: TCTTCGGCCATGGTTTTCTCAAACAATGATGAAGGC...CACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp ACAGTGAATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGGATGCATTCTTCCACAAGGCTTTGATTTaGTTGTTTCACAGCAGAATA +
Preference number: 4 (lower is better)
Translates to: TVNGELDECAVGYQDAFFHKALI*LFHSRI
Trigger: TATTCTGCTGTGAAACAATCAAATCAAAGCCTTGTG...GAAGAATGCATCCTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR TCA 90 bp TACTTTCCAATCAGGCAACACAGACTCCGAGCTGCTTTTGTTTTTGGTCCCTGGCACAAGGCTTTGATTTaGTTGTTTCACAGCAGAATA +
Preference number: 4 (lower is better)
Translates to: YFPIRQHRLRAAFVFGPWHKALI*LFHSRI
Trigger: TATTCTGCTGTGAAACAATCAAATCAAAGCCTTGTG...CCAGGGACCAAAAACAAAAGCAGCTCGGAGTCTGTGTTGCCTGATTGGAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp ACCGCATCGCTTCGAGATATTTTCCACCACTCGACCCTCTACATCTGTTTGAAAACTGACACAAGGCTTTaGTTTGATTGTTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: TASLRDIFHHSTLYICLKTDTRL*FDCFTA
Trigger: TGCTGTGAAACAATCAAATCAAAGCCTTGTGTCAGT...TTTCAAACAGATGTAGAGGGTCGAGTGGTGGAAAATATCTCGAAGCGATGCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451636.5
CDS-3UTR TCA 90 bp TGGCATGGTCCTAGCTGCATTGAGACCACTTGTCATGTGTTAACTGACACAAGGATCAAAATGGAATTGTaGATTAAAGTAGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: WHGPSCIETTCHVLTDTRIKMEL*IKVGHW
Trigger: CCAGTGGCCTACTTTAATTCACAATTCCATTTTGAT...CCTTGTGTCAGTTAACACATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp GATTTTTGTGCATCCATTGAGGTTCAAATGTTCAATGTTTCGGCAGTTCTGTGCGTTTCGGCAGTTCTGTaGAAAGGTCTTCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: DFCASIEVQMFNVSAVLCVSAVL*KGLQGG
Trigger: TCCTCCTTGAAGACCTTTGCACAGAACTGCCGAAAC...GCACAGAACTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000422741.5
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAATACGTGAGCAGGACTaGAAGTTGAGGCTCACAAGC +
Preference number: 4 (lower is better)
Translates to: GENYHQSNCNPYRSLLPVIREQD*KLRLTS
Trigger: GCTTGTGAGCCTCAACTTGCAGTCCTGCTCACGTAT...TACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp GAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAAATCAGCCCCTGCATATCTaGACCACACCTTCATCCGTG +
Preference number: 4 (lower is better)
Translates to: ENYHQSNCNPYRSLLPVNQPLHI*TTPSSV
Trigger: CACGGATGAAGGTGTGGTGCAGATATGCAGGGGCTG...ATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp TCTTCAAGATCCATCTTCTCCAATTCGTGGCAATTCCGAGCTAAAAGTGTAAAAGTACTGTTGCTCAGGTaGAGGATCCCATCATCTGTG +
Preference number: 4 (lower is better)
Translates to: SSRSIFSNSWQFRAKSVKVLLLR*RIPSSV
Trigger: CACAGATGATGGGATCCTGCACCTGAGCAACAGTAC...TTTTACACTTTTAGCTCGGAATTGCCACGAATTGGAGAAGATGGATCTTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR GCA 90 bp AACTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAAGTACTGTTGCTCAGGTaGAGGATCCCATCATCTGTG +
Preference number: 4 (lower is better)
Translates to: NCNPYRSLLPVNAFPNGEVLLLR*RIPSSV
Trigger: CACAGATGATGGGATCCTGCACCTGAGCAACAGTAC...TTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp TACTTTCCAATCAGGCAACACAGACTCCGAGCTGCTTTTGTTTTTGGTCCCTGGTCTTTTACCTGTAAATaGCTTTCCCAATGGAGAATC +
Preference number: 4 (lower is better)
Translates to: YFPIRQHRLRAAFVFGPWSFTCK*LSQWRI
Trigger: GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGA...CCAGGGACCAAAAACAAAAGCAGCTCGGAGTCTGTGTTGCCTGATTGGAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp CTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCTGGCATGGTCCTAGCTaGATTGAGACCACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LQSIQKSFTCKCLSQWRIWHGPS*IETTCH
Trigger: ATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA...GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp GTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTAAGAGATCCAGGTTTCTGAGCCTTGGAAATCTGTaGACATCGGCACAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: VELSYLGRYQSLKRSRFLSLGNL*TSAQSY
Trigger: GTAACTTTGTGCCGATGTGCACAGATTTCCAAGGCT...CAGAAACCTGGATCTCTTAAGAGATTGGTACCTACCTAGGTACGAAAGTTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp AACTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATTCACGCCATTCTTCTaGCTCAGTCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: NCNPYRSLLPVNAFPNGEFTPFF*LSLLSS
Trigger: GCTACTCAGGAGACTGAGGCAGAAGAATGGCGTGAA...TTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR CCA 90 bp GACTTTAATGCTTACTCTGATGATAATTGTGCTAAGTCCGTTTATGGGGAGATTGTCTCCTGGGCTGGATaGAGTGCAATGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: DFNAYSDDNCAKSVYGEIVSWAG*SAMAQS
Trigger: AGATTGTGCCATTGCACTCCATCCAGCCCAGGAGAC...AATCTCCCCATAAACGGACTTAGCACAATTATCATCAGAGTAAGCATTAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484457.6
3UTR CAA 72 bp AGAGCAGACGCACTGTCAGTGATTTTTGTGCATCCATaGAGGTTCAAATGTTCAATGTTTCGGCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RADALSVIFVHP*RFKCSMFRQFC
Trigger: ACAGAACTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAAATCACTGACAGTGCGTCTGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422741.5
CDS-3UTR TCA 90 bp CAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTGAATGGAGAGCTGGATaGGTGTGCTGTCGGTTATCA +
Preference number: 4 (lower is better)
Translates to: QNKGENYHQSNCNPYRSLEWRAG*VCCRLS
Trigger: TGATAACCGACAGCACACTCATCCAGCTCTCCATTC...AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp GGCTTTGATTTGATTGTTTCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTAATCAACAGATTGGGTaGTGGTGGAGTCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GFDLIVSQQNKGENYHQSNQQIG*WWSRSG
Trigger: TCCTGACCGACTCCACCATCACCCAATCTGTTGATT...ACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGAAACAATCAAATCAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp TCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGAGAGGCCATGGATCATTaGGCATCAAGTCCAATAGCT +
Preference number: 4 (lower is better)
Translates to: SIQKSFTCKCLSQWRINREAMDH*ASSPIA
Trigger: AGCTATTGGACTTGATGCTCAATGATCCATGGCCTC...TCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR GCA 90 bp CGTGCCCAGCCTGCAAACCTGATTTTCTTACAAGAGGTTCTCCTGTTTTGTAAAAAAAGATCTATTCTTTaGCAGTTGCTTCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RAQPANLIFLQEVLLFCKKRSIL*QLLPSR
Trigger: CCTGGATGGAAGCAACTGGCAAAGAATAGATCTTTT...TTTACAAAACAGGAGAACCTCTTGTAAGAAAATCAGGTTTGCAGGCTGGGCACG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR GCA 90 bp ATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTAAAAGATCTATTCTTTaGCAGTTGCTTCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: MLSMPRVELSYLGRYQSLKRSIL*QLLPSR
Trigger: CCTGGATGGAAGCAACTGGCAAAGAATAGATCTTTT...AAGAGATTGGTACCTACCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp CAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTATACGTGAGCAGGACTaGAAGTTGAGGCTCACAAGC +
Preference number: 4 (lower is better)
Translates to: QNKGENYHQSNCNPYRSLIREQD*KLRLTS
Trigger: GCTTGTGAGCCTCAACTTGCAGTCCTGCTCACGTAT...AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGAGCCTTGGAAATCTGTaGACATCGGCACAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVSLGNL*TSAQSY
Trigger: GTAACTTTGTGCCGATGTGCACAGATTTCCAAGGCT...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp ATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACTGTTTGAGAAAACCATaGCCGAAGAGCCGCGAGCGA +
Preference number: 4 (lower is better)
Translates to: IKVKTITRVTAIHTEVFYCLRKP*PKSRER
Trigger: TCGCTCGCGGCTCTTCGGCCATGGTTTTCTCAAACA...GTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp ATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTAAATGCCTTTCCCAATaGAGAATCAACAGATTGGGT +
Preference number: 4 (lower is better)
Translates to: MLSMPRVELSYLGRYQSLKCLSQ*RINRLG
Trigger: ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTT...AAGAGATTGGTACCTACCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp TCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGAAGAGATCCAGGTTTCTaGCATGGTCCTAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: SIQKSFTCKCLSQWRINRRDPGF*HGPSCI
Trigger: AATGCAGCTAGGACCATGCCAGAAACCTGGATCTCT...TCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp GGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAAGAGATCCAGGTTTCTaGCATGGTCCTAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: GENYHQSNCNPYRSLLPVRDPGF*HGPSCI
Trigger: AATGCAGCTAGGACCATGCCAGAAACCTGGATCTCT...TACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp TGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAAGATGTTCCAAGCCTTaGAAATCTGTGCACATCGGC +
Preference number: 4 (lower is better)
Translates to: CNPYRSLLPVNAFPNGESRCSKP*KSVHIG
Trigger: GCCGATGTGCACAGATTTCCAAGGCTTGGAACATCT...TGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp ATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACGTTTCTCATGAGCTCTaGCCCTTCAGTTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: IKVKTITRVTAIHTEVFYVSHEL*PFSLGE
Trigger: CTCCCCCAAACTGAAGGGCCAGAGCTCATGAGAAAC...GTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
3UTR CAA 72 bp ATAATCACTGAAGCAAGTCTGTTATATGCTCATTTATaGAAGTTGCTTCCTGCATCAGTCCTCCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: IITEASLLYAHL*KLLPASVLLPH
Trigger: ATGGGGGAGGAGGACTGATGCAGGAAGCAACTTCAATAAATGAGCATATAACAGACTTGCTTCAGTGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR TCA 90 bp GGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAGCCTTCATCATTGTTTaGGAAAACCATGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: GENYHQSNCNPYRSLLPVAFIIV*ENHGRR
Trigger: TCTTCGGCCATGGTTTTCTCAAACAATGATGAAGGC...TACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp GAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAAATGAATGGAGAGCTGGATaGGTGTGCTGTCGGTTATCA +
Preference number: 4 (lower is better)
Translates to: ENYHQSNCNPYRSLLPVNEWRAG*VCCRLS
Trigger: TGATAACCGACAGCACACTCATCCAGCTCTCCATTC...ATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp AAGAATGAACCACAGCAGAGAGTAGGGTCATTTTATCAGATTTCAGATAACATCTGCAGTTTAGGACAGTaGATGGAGAGCTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: KNEPQQRVGSFYQISDNICSLGQ*MESWMS
Trigger: ACTCATCCAGCTCTCCATTCACTGTCCTAAACTGCA...GATGTTATCTGAAATCTGATAAAATGACCCTACTCTCTGCTGTGGTTCATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp ATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTGTGGTGATGACTGATTaGCAGGTTCTTAATAAAGAT +
Preference number: 4 (lower is better)
Translates to: MLSMPRVELSYLGRYQSLVVMTD*QVLNKD
Trigger: ATCTTTATTAAGAACCTGTCAATCAGTCATCACCAC...AAGAGATTGGTACCTACCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp GGCTTTGATTTGATTGTTTCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTCCCAGCCTGCAAACCTaGTTTTCTTACAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GFDLIVSQQNKGENYHQSPSLQT*FSYKRF
Trigger: GAACCTCTTGTAAGAAAATCAGGTTTGCAGGCTGGG...ACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGAAACAATCAAATCAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR GCA 90 bp CTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGTGTCGGTTATCAGGATaGATTCTTCAAGATCCATCT +
Preference number: 4 (lower is better)
Translates to: LLPVNAFPNGESTDWVMVCRLSG*ILQDPS
Trigger: AGATGGATCTTGAAGAATGCATCCTGATAACCGACA...CACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp CAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTACACAGACTCCGAGCTaGTTTTGTTTTTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QNKGENYHQSNCNPYRSLTQTPS*FCFWSL
Trigger: CAGGGACCAAAAACAAAAGCAGCTCGGAGTCTGTGT...AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp GGCTTTGATTTGATTGTTTCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTACACAGACTCCGAGCTaGTTTTGTTTTTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GFDLIVSQQNKGENYHQSTQTPS*FCFWSL
Trigger: CAGGGACCAAAAACAAAAGCAGCTCGGAGTCTGTGT...ACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGAAACAATCAAATCAAAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp GTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTAAGAGATCCAGGTTTCTGAAATGCCTTTCCCAATaGAGAATCAACAGATTGGGT +
Preference number: 4 (lower is better)
Translates to: VELSYLGRYQSLKRSRFLKCLSQ*RINRLG
Trigger: ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTT...CAGAAACCTGGATCTCTTAAGAGATTGGTACCTACCTAGGTACGAAAGTTCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp GACTTTAATGCTTACTCTGATGATAATTGTGCTAAGTCCGTTTATGGGGAGATTAGATGTTCCAAGCCTTaGAAATCTGTGCACATCGGC +
Preference number: 4 (lower is better)
Translates to: DFNAYSDDNCAKSVYGEIRCSKP*KSVHIG
Trigger: GCCGATGTGCACAGATTTCCAAGGCTTGGAACATCT...AATCTCCCCATAAACGGACTTAGCACAATTATCATCAGAGTAAGCATTAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp ATGGTCTTTTTGAGGAATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTCTGCATTTGGAAAATaGTTTTGCTTGGATGTGTCT +
Preference number: 4 (lower is better)
Translates to: MVFLRNAEYAKGRTFVPRSAFGK*FCLDVS
Trigger: AGACACATCCAAGCAAAACCATTTTCCAAATGCAGA...CCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCATTCCTCAAAAAGACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp GAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAAATTGCAGTTTAGGACAGTaGATGGAGAGCTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: ENYHQSNCNPYRSLLPVNCSLGQ*MESWMS
Trigger: ACTCATCCAGCTCTCCATTCACTGTCCTAAACTGCA...ATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp GTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTAAGAGATCCAGGTTTCTGCACAAGGCTTTGATTTaGTTGTTTCACAGCAGAATA +
Preference number: 4 (lower is better)
Translates to: VELSYLGRYQSLKRSRFLHKALI*LFHSRI
Trigger: TATTCTGCTGTGAAACAATCAAATCAAAGCCTTGTG...CAGAAACCTGGATCTCTTAAGAGATTGGTACCTACCTAGGTACGAAAGTTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp GAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAAATAAGGGCCAGCCACCATaGACACCTAAGTTTACAATG +
Preference number: 4 (lower is better)
Translates to: ENYHQSNCNPYRSLLPVNKGQPP*TPKFTM
Trigger: CATTGTAAACTTAGGTGTTCATGGTGGCTGGCCCTT...ATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp GTTATCAGGATGCATTCTTCAAGATCCATCTTCTCCAATTCGTGGCAATTCCGATCTTTTACCTGTAAATaGCTTTCCCAATGGAGAATC +
Preference number: 4 (lower is better)
Translates to: VIRMHSSRSIFSNSWQFRSFTCK*LSQWRI
Trigger: GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGA...TCGGAATTGCCACGAATTGGAGAAGATGGATCTTGAAGAATGCATCCTGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR GCA 90 bp GTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTAAGAGATCCAGGTTTCTGTATCACCAGAGTAACTaGAATCCATACAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: VELSYLGRYQSLKRSRFLYHQSN*NPYRSL
Trigger: AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATA...CAGAAACCTGGATCTCTTAAGAGATTGGTACCTACCTAGGTACGAAAGTTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp GTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTAAGAGATCCAGGTTTCTGTTTGGAAAATGGTTTTaGTTGGATGTGTCTGCCATA +
Preference number: 4 (lower is better)
Translates to: VELSYLGRYQSLKRSRFLFGKWF*LDVSAI
Trigger: TATGGCAGACACATCCAAGCAAAACCATTTTCCAAA...CAGAAACCTGGATCTCTTAAGAGATTGGTACCTACCTAGGTACGAAAGTTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATCTTCTCCAATTCGTaGCAATTCCGAGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVIFSNS*QFRAKS
Trigger: ACTTTTAGCTCGGAATTGCCACGAATTGGAGAAGAT...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp GATTTTTGTGCATCCATTGAGGTTCAAATGTTCAATGTTTCGGCAGTTCTGTGCATCTTCTCCAATTCGTaGCAATTCCGAGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: DFCASIEVQMFNVSAVLCIFSNS*QFRAKS
Trigger: ACTTTTAGCTCGGAATTGCCACGAATTGGAGAAGAT...GCACAGAACTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CCA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGAAATGCCTTTCCCAATaGAGAATCAACAGATTGGGT +
Preference number: 4 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVKCLSQ*RINRLG
Trigger: ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTT...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp CTGTCAGTGATTTTTGTGCATCCATTGAGGTTCAAATGTTCAATGTTTCGGCAGAAATGCCTTTCCCAATaGAGAATCAACAGATTGGGT +
Preference number: 4 (lower is better)
Translates to: LSVIFVHPLRFKCSMFRQKCLSQ*RINRLG
Trigger: ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTT...CTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAAATCACTGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422741.5
ENST00000451636.5
CDS-3UTR CCA 90 bp CTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGTTCTTTGGTGTCTCATaGAAACCTATTAACATGCCT +
Preference number: 4 (lower is better)
Translates to: LLPVNAFPNGESTDWVMVFFGVS*KPINMP
Trigger: AGGCATGTTAATAGGTTTCCATGAGACACCAAAGAA...CACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp TCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGCTGCTTTTGTTTTTaGTCCCTGGAGGTGTATATG +
Preference number: 4 (lower is better)
Translates to: SQQNKGENYHQSNCNPYRSCFCF*SLEVYM
Trigger: CATATACACCTCCAGGGACCAAAAACAAAAGCAGCT...TCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp AACTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAAACTGACACAAGGCTTTaGTTTGATTGTTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: NCNPYRSLLPVNAFPNGETDTRL*FDCFTA
Trigger: TGCTGTGAAACAATCAAATCAAAGCCTTGTGTCAGT...TTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGGTGGTGATGACTGATTaGCAGGTTCTTAATAAAGAT +
Preference number: 4 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVVVMTD*QVLNKD
Trigger: ATCTTTATTAAGAACCTGTCAATCAGTCATCACCAC...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp TCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAAAAGATCTATTCTTTaGCAGTTGCTTCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SQQNKGENYHQSNCNPYRKRSIL*QLLPSR
Trigger: CCTGGATGGAAGCAACTGGCAAAGAATAGATCTTTT...TCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp AAAAATGTGTTATGTGCTGTAGCATACACCAGAGCTTCTACTTTCCAATCAGGCTCTTTTACCTGTAAATaGCTTTCCCAATGGAGAATC +
Preference number: 4 (lower is better)
Translates to: KNVLCAVAYTRASTFQSGSFTCK*LSQWRI
Trigger: GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGA...GCCTGATTGGAAAGTAGAAGCTCTGGTGTATGCTACAGCACATAACACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp CTGTCAGTGATTTTTGTGCATCCATTGAGGTTCAAATGTTCAATGTTTCGGCAGTATCACCAGAGTAACTaGAATCCATACAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LSVIFVHPLRFKCSMFRQYHQSN*NPYRSL
Trigger: AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATA...CTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAAATCACTGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422741.5
ENST00000451636.5
CDS-3UTR GCA 90 bp CTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGTTGCTTGGATGTGTCTaGCATAAAATCATAGCAATA +
Preference number: 4 (lower is better)
Translates to: LLPVNAFPNGESTDWVMVLLGCV*HKIIAI
Trigger: TATTGCTATGATTTTATGGCAGACACATCCAAGCAA...CACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp GGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAAAATGCCTTTCCCAATaGAGAATCAACAGATTGGGT +
Preference number: 4 (lower is better)
Translates to: GENYHQSNCNPYRSLLPVKCLSQ*RINRLG
Trigger: ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTT...TACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp CTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCATTAAAGTAGGCCACTaGCTTAAGTATCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: LQSIQKSFTCKCLSQWRIIKVGH*LKYQVE
Trigger: TTCTACCTGATACTTAAGCCAGTGGCCTACTTTAAT...GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp GGCTTTGATTTGATTGTTTCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTAGCTGCTTTTGTTTTTaGTCCCTGGAGGTGTATATG +
Preference number: 4 (lower is better)
Translates to: GFDLIVSQQNKGENYHQSSCFCF*SLEVYM
Trigger: CATATACACCTCCAGGGACCAAAAACAAAAGCAGCT...ACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGAAACAATCAAATCAAAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp TGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCATATCACCAGAGTAACTaGAATCCATACAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: CNPYRSLLPVNAFPNGESYHQSN*NPYRSL
Trigger: AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATA...TGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp GGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTATATCACCAGAGTAACTaGAATCCATACAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: GENYHQSNCNPYRSLLPVYHQSN*NPYRSL
Trigger: AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATA...TACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp CTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCTTGCTTGGATGTGTCTaGCATAAAATCATAGCAATA +
Preference number: 4 (lower is better)
Translates to: LQSIQKSFTCKCLSQWRILLGCV*HKIIAI
Trigger: TATTGCTATGATTTTATGGCAGACACATCCAAGCAA...GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp TGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCATTTGGAAAATGGTTTTaGTTGGATGTGTCTGCCATA +
Preference number: 4 (lower is better)
Translates to: CNPYRSLLPVNAFPNGESFGKWF*LDVSAI
Trigger: TATGGCAGACACATCCAAGCAAAACCATTTTCCAAA...TGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp GGCTTTGATTTGATTGTTTCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTATCTTCTCCAATTCGTaGCAATTCCGAGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: GFDLIVSQQNKGENYHQSIFSNS*QFRAKS
Trigger: ACTTTTAGCTCGGAATTGCCACGAATTGGAGAAGAT...ACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGAAACAATCAAATCAAAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp GTATCCTGGCTCAAAAGAAATCAATCATGTATAGAAGGCTCTGGTGGTTTGTTTATTAAAGTAGGCCACTaGCTTAAGTATCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: VSWLKRNQSCIEGSGGLFIKVGH*LKYQVE
Trigger: TTCTACCTGATACTTAAGCCAGTGGCCTACTTTAAT...AAACAAACCACCAGAGCCTTCTATACATGATTGATTTCTTTTGAGCCAGGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR TCA 90 bp ATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACACTGACACAAGGCTTTaGTTTGATTGTTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: IKVKTITRVTAIHTEVFYTDTRL*FDCFTA
Trigger: TGCTGTGAAACAATCAAATCAAAGCCTTGTGTCAGT...GTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR TCA 90 bp AAGAATGAACCACAGCAGAGAGTAGGGTCATTTTATCAGATTTCAGATAACATCATCAAAATGGAATTGTaGATTAAAGTAGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: KNEPQQRVGSFYQISDNIIKMEL*IKVGHW
Trigger: CCAGTGGCCTACTTTAATTCACAATTCCATTTTGAT...GATGTTATCTGAAATCTGATAAAATGACCCTACTCTCTGCTGTGGTTCATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp CAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTCTTTGGTGTCTCATaGAAACCTATTAACATGCCT +
Preference number: 4 (lower is better)
Translates to: QNKGENYHQSNCNPYRSLFFGVS*KPINMP
Trigger: AGGCATGTTAATAGGTTTCCATGAGACACCAAAGAA...AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp TCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGAATGTATAGAAGGCTCTaGTGGTTTGTTTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SIQKSFTCKCLSQWRINRMYRRL*WFVLFV
Trigger: AACAAACAAAACAAACCACCAGAGCCTTCTATACAT...TCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR GCA 90 bp GAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAAATTCTTTTACCTGTAAATaGCTTTCCCAATGGAGAATC +
Preference number: 4 (lower is better)
Translates to: ENYHQSNCNPYRSLLPVNSFTCK*LSQWRI
Trigger: GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGA...ATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CCA 90 bp ATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACTCTGCATTTGGAAAATaGTTTTGCTTGGATGTGTCT +
Preference number: 4 (lower is better)
Translates to: IKVKTITRVTAIHTEVFYSAFGK*FCLDVS
Trigger: AGACACATCCAAGCAAAACCATTTTCCAAATGCAGA...GTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR GCA 90 bp TTTAGCAGAATCTCATCATTGCTACAAAACAATGATGTGTGTCTTCCATTCTTCGCAGAATCTCATCATTaGTACAAAACAATGATGTGT +
Preference number: 4 (lower is better)
Translates to: FSRISSLLQNNDVCLPFFAESHH*YKTMMC
Trigger: ACACATCATTGTTTTGTAGCAATGATGAGATTCTGC...GAAGAATGGAAGACACACATCATTGTTTTGTAGCAATGATGAGATTCTGCTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435207.5
CDS-3UTR CAA 90 bp GCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGGGCAGCCTCCAAAATTaGCAGTCGCGGACAGTTCAA +
Preference number: 5 (lower is better)
Translates to: ARVTCWQSYSSRRSRPRQGSLQN*QSRTVQ
Trigger: TTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC...CTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp TACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCACAGAGGCATCTGTGAGGTaGCTGCAACCCGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: YSSRRSRPRQFSRCSRATEASVR*LQPERQ
Trigger: CTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTC...TGTGGCCCTGGAACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp AGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTGGAGGCATCTGTGAGGTaGCTGCAACCCGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: RAFRPRQPRTSASMPSFVEASVR*LQPERQ
Trigger: CTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTC...CACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CCTCATCACCCCTTGGGCCCAGGCAGCTGCTGTCAGAGAATGACACAGCACCTGGAGCAGGACTGCAAGTaGAGGCTCACAAGCTCATGG +
Preference number: 5 (lower is better)
Translates to: PHHPLGPGSCCQRMTQHLEQDCK*RLTSSW
Trigger: CCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCTC...CAGGTGCTGTGTCATTCTCTGACAGCAGCTGCCTGGGCCCAAGGGGTGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CAA 90 bp AGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCACATCAGTGATGAGGAGGCAGTGGCCACAGGTACTGTaGCTCAGGTGCAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: RPRQFSRCSRATSVMRRQWPQVL*LRCRIP
Trigger: TGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCA...CTGCCTCCTCATCACTGATGTGGCCCTGGAACACCTAGAGAACTGCCGAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CAGCCCCTCAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGGTCCTAGCTGCATaGAGACCACTTGTCATGTGT +
Preference number: 5 (lower is better)
Translates to: QPLRSRAFRPRQPRTSASMVLAA*RPLVMC
Trigger: ACACATGACAAGTGGTCTCAATGCAGCTAGGACCAT...CGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CAA 90 bp GTGTGCAGCCCCTCAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGGGCCTTCATCATTGTTaGAGAAAACCATGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: VCSPSGAGLSGLDNLAPVGLHHC*RKPWPK
Trigger: CTTCGGCCATGGTTTTCTCAAACAATGATGAAGGCC...CACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGCTGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp GAGGAGGCAGTTGTCCAACTCCAGTACCCGCAGCCTCTCATGGCCACAGGTACTGAGCAGGACTGCAAGTaGAGGCTCACAAGCTCATGG +
Preference number: 5 (lower is better)
Translates to: EEAVVQLQYPQPLMATGTEQDCK*RLTSSW
Trigger: CCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCTC...AGTACCTGTGGCCATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CTAACTGTGTGCAGCCCCTCAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCAGGCAGCCTCCAAAATTaGCAGTCGCGGACAGTTCAA +
Preference number: 5 (lower is better)
Translates to: LTVCSPSGAGLSGLDNLAGSLQN*QSRTVQ
Trigger: TTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC...TGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGCTGCACACAGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGATGGCCACAGGTACTGTaGCTCAGGTGCAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: PASVKWEHRAASKICSRGWPQVL*LRCRIP
Trigger: TGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCA...TCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp TGCAGCCCCTCAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTAAGATGTTCCAAGCCTaGGAAATCTGTGCACATCGG +
Preference number: 5 (lower is better)
Translates to: CSPSGAGLSGLDNLAPVPKMFQA*EICAHR
Trigger: CCGATGTGCACAGATTTCCAAGGCTTGGAACATCTT...AGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421391.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CTAACTGTGTGCAGCCCCTCAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCAAACCCAAACAGCTTCTaGTTGTGGTGGGAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: LTVCSPSGAGLSGLDNLANPNSF*LWWEGS
Trigger: AGAGCCCTCCCACCACAACAAGAAGCTGTTTGGGTT...TGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGCTGCACACAGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451636.5
CDS-3UTR CAA 90 bp TGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAATAAGGCCTTCATCATaGTTTGAGAAAACCATGGCC +
Preference number: 5 (lower is better)
Translates to: CTGNLLAVVQLEALQASAIRPSS*FEKTMA
Trigger: GGCCATGGTTTTCTCAAACAATGATGAAGGCCTTAT...TGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp GCTGTAAGAGAGGCATCTGTGAGGTTGCTGCAACCCGAAAGGCAGAGAGCCTGTGAGGCATCTGTGAGGTaGCTGCAACCCGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: AVREASVRLLQPERQRACEASVR*LQPERQ
Trigger: CTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTC...ACAGGCTCTCTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTCTCTTACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp AGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTGTGGAGAATCAACAGATaGGGTGATGGTGGAGTCGGT +
Preference number: 5 (lower is better)
Translates to: RAFRPRQPRTSASMPSFVWRINR*GDGGVG
Trigger: ACCGACTCCACCATCACCCAATCTGTTGATTCTCCA...CACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CAGGAGCAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCATGGTCCTAGCTGCATaGAGACCACTTGTCATGTGT +
Preference number: 5 (lower is better)
Translates to: QEQGFQASTTSHQCLDAIMVLAA*RPLVMC
Trigger: ACACATGACAAGTGGTCTCAATGCAGCTAGGACCAT...GATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CAA 90 bp TACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCACAAAGATGTTCCAAGCCTaGGAAATCTGTGCACATCGG +
Preference number: 5 (lower is better)
Translates to: YSSRRSRPRQFSRCSRATKMFQA*EICAHR
Trigger: CCGATGTGCACAGATTTCCAAGGCTTGGAACATCTT...TGTGGCCCTGGAACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421391.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CCTCATCACCCCTTGGGCCCAGGCAGCTGCTGTCAGAGAATGACACAGCACCTGGGCCTTCATCATTGTTaGAGAAAACCATGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PHHPLGPGSCCQRMTQHLGLHHC*RKPWPK
Trigger: CTTCGGCCATGGTTTTCTCAAACAATGATGAAGGCC...CAGGTGCTGTGTCATTCTCTGACAGCAGCTGCCTGGGCCCAAGGGGTGATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTGAGCAGGACTGCAAGTaGAGGCTCACAAGCTCATGG +
Preference number: 5 (lower is better)
Translates to: RQSNGSIGQPPKFAVADSEQDCK*RLTSSW
Trigger: CCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCTC...ACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp GGCTGTAAGAGAGGCATCTGTGAGGTTGCTGCAACCCGAAAGGCAGAGAGCCTGGGCAGCCTCCAAAATTaGCAGTCGCGGACAGTTCAA +
Preference number: 5 (lower is better)
Translates to: GCKRGICEVAATRKAESLGSLQN*QSRTVQ
Trigger: TTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC...CAGGCTCTCTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTCTCTTACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CGAGCTAAAAGTGTAAAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCTGGCCACAGGTACTGTaGCTCAGGTGCAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: RAKSVKPASVKWEHRAASWPQVL*LRCRIP
Trigger: TGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCA...GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTTTACACTTTTAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTATGGTCCTAGCTGCATaGAGACCACTTGTCATGTGT +
Preference number: 5 (lower is better)
Translates to: QGFQASTTSHQCLDAILRMVLAA*RPLVMC
Trigger: ACACATGACAAGTGGTCTCAATGCAGCTAGGACCAT...ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS TCA 90 bp CCCGTGAAGGCCTCTGGAGAATTATGCCTTCGGTTGGCAATTCTCTaGACTTGTCTGTTCAAGCCAGCACCTCCGCCGAGTGAAACCGAG +
Preference number: 5 (lower is better)
Translates to: PVKASGELCLRLAIL*TCLFKPAPPPSETE
Trigger: CTCGGTTTCACTCGGCGGAGGTGCTGGCTTGAACAGACAAGTTCAGAGAATTGCCAACCGAAGGCATAATTCTCCAGAGGCCTTCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483037.5
CDS GCA 90 bp AAGCTAGCCTTTTTGCCCTTCTGCAATGGGATGACACAGCAAGAATaGCCTCAGCAGATGCCAGCCCCTGGACTTCCCAGCCTTCAGAAC +
Preference number: 5 (lower is better)
Translates to: KLAFLPFCNGMTQQE*PQQMPAPGLPSLQN
Trigger: GTTCTGAAGGCTGGGAAGTCCAGGGGCTGGCATCTGCTGAGGGCATTCTTGCTGTGTCATCCCATTGCAGAAGGGCAAAAAGGCTAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464990.1
CDS-3UTR CAA 90 bp ACACCTTCATCCGTGATACGTGAGCAGGACTGCAAGTTGAGGCTCACAAGCTCAGAGGCATCTGTGAGGTaGCTGCAACCCGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: TPSSVIREQDCKLRLTSSEASVR*LQPERQ
Trigger: CTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTC...TGAGCTTGTGAGCCTCAACTTGCAGTCCTGCTCACGTATCACGGATGAAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp GCTGTAAGAGAGGCATCTGTGAGGTTGCTGCAACCCGAAAGGCAGAGAGCCTGTGGCAGCCTCCAAAATTaGCAGTCGCGGACAGTTCAA +
Preference number: 5 (lower is better)
Translates to: AVREASVRLLQPERQRACGSLQN*QSRTVQ
Trigger: TTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC...ACAGGCTCTCTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTCTCTTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp ACACCTTCATCCGTGATACGTGAGCAGGACTGCAAGTTGAGGCTCACAAGCTCATGGCCACAGGTACTGTaGCTCAGGTGCAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: TPSSVIREQDCKLRLTSSWPQVL*LRCRIP
Trigger: TGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCA...TGAGCTTGTGAGCCTCAACTTGCAGTCCTGCTCACGTATCACGGATGAAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CATATCTGCACCACACCTTCATCCGTGATACGTGAGCAGGACTGCAAGTTGAGGGTGATGAGGAGGCAGTaGTCCAACTCCAGTACCCGC +
Preference number: 5 (lower is better)
Translates to: HICTTPSSVIREQDCKLRVMRRQ*SNSSTR
Trigger: GCGGGTACTGGAGTTGGACAACTGCCTCCTCATCAC...CCTCAACTTGCAGTCCTGCTCACGTATCACGGATGAAGGTGTGGTGCAGATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp GAGGTTCAGGTACTCCAGGTTTCGGCAGCCCTCACTGATCCCCTTCAAGGAGCTTGGAGAATCAACAGATaGGGTGATGGTGGAGTCGGT +
Preference number: 5 (lower is better)
Translates to: EVQVLQVSAALTDPLQGAWRINR*GDGGVG
Trigger: ACCGACTCCACCATCACCCAATCTGTTGATTCTCCA...AGCTCCTTGAAGGGGATCAGTGAGGGCTGCCGAAACCTGGAGTACCTGAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CAGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTATAAGGCCTTCATCATaGTTTGAGAAAACCATGGCC +
Preference number: 5 (lower is better)
Translates to: QGFQASTTSHQCLDAILRIRPSS*FEKTMA
Trigger: GGCCATGGTTTTCTCAAACAATGATGAAGGCCTTAT...ACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACGAGGCATCTGTGAGGTaGCTGCAACCCGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: LSQWRINRLGDGGVGQEDEASVR*LQPERQ
Trigger: CTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTC...GTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp CCGCTTGATGCCTGCACGGGTAACCTGCTGGCAGTCGTACAGCTCGAGGCGCTCACACAAGGCTTTGATTaGATTGTTTCACAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: PLDACTGNLLAVVQLEALTQGFD*IVSQQN
Trigger: ATTCTGCTGTGAAACAATCAAATCAAAGCCTTGTGT...GAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CAA 90 bp TCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCACACAAGGCTTTGATTaGATTGTTTCACAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: SYSSRRSRPRQFSRCSRATQGFD*IVSQQN
Trigger: ATTCTGCTGTGAAACAATCAAATCAAAGCCTTGTGT...GGCCCTGGAACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CAA 90 bp ACCCAGGGCTGTAAGAGAGGCATCTGTGAGGTTGCTGCAACCCGAAAGGCAGAGATGGTCCTAGCTGCATaGAGACCACTTGTCATGTGT +
Preference number: 5 (lower is better)
Translates to: TQGCKRGICEVAATRKAEMVLAA*RPLVMC
Trigger: ACACATGACAAGTGGTCTCAATGCAGCTAGGACCAT...CTCTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTCTCTTACAGCCCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CAA 90 bp TCGTACAGCTCGAGGCGCTCCAGGCCTCGGCAGTTCTCTAGGTGTTCCAGGGCCAGCAGAATCTCATCATaGCTACAAAACAATGATGTG +
Preference number: 5 (lower is better)
Translates to: SYSSRRSRPRQFSRCSRASRISS*LQNNDV
Trigger: CACATCATTGTTTTGTAGCAATGATGAGATTCTGCT...GGCCCTGGAACACCTAGAGAACTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435207.5
CDS-3UTR CAA 90 bp TTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCTTCTAGAGGAAAGGATGCTCTGGCCCTTCAGTTaGGGGGAGTGGTTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: LGDGGVGQEDSGLLEERMLWPFS*GEWLFG
Trigger: TCCAAACAACCACTCCCCCAAACTGAAGGGCCAGAG...CATCCTTTCCTCTAGAAGACCTGAGTCTTCCTGACCGACTCCACCATCACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS TCA 90 bp GCAAGGACTAGCTCAGGTCGTCTCCATCATTCTGAAATACAGCTTTaGGATTTGCTCCTTCCAACCTGCCCTGGTACCGGTAGGGGGAAC +
Preference number: 5 (lower is better)
Translates to: ARTSSGRLHHSEIQL*DLLLPTCPGTGRGN
Trigger: GTTCCCCCTACCGGTACCAGGGCAGGTTGGAAGGAGCAAATCTCAAAGCTGTATTTCAGAATGATGGAGACGACCTGAGCTAGTCCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463698.5
CDS GCA 90 bp CTAGCTCAGGTCGTCTCCATCATTCTGAAATACAGCTTTGAGATTTaGTCCTTCCAACCTGCCCTGGTACCGGTAGGGGGAACCAAGCCT +
Preference number: 5 (lower is better)
Translates to: LAQVVSIILKYSFEI*SFQPALVPVGGTKP
Trigger: AGGCTTGGTTCCCCCTACCGGTACCAGGGCAGGTTGGAAGGAGCAAATCTCAAAGCTGTATTTCAGAATGATGGAGACGACCTGAGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463698.5
CDS-3UTR CAA 90 bp GCAGCCTCGCAAGCTGAGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATTTCTATTCTTTGCCAGTaGCTTCCATCCAGGGCTAAG +
Preference number: 5 (lower is better)
Translates to: AASQAELPQESTASLRDISILCQ*LPSRAK
Trigger: CTTAGCCCTGGATGGAAGCAACTGGCAAAGAATAGA...AATATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp TTGCAGTTTAGGACAGTGAATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGGTGATGAGGAGGCAGTaGTCCAACTCCAGTACCCGC +
Preference number: 5 (lower is better)
Translates to: LQFRTVNGELDECAVGYQVMRRQ*SNSSTR
Trigger: GCGGGTACTGGAGTTGGACAACTGCCTCCTCATCAC...CTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGTCCTAAACTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp ACAGTGAATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGGATGCATTCTTCGTGATGAGGAGGCAGTaGTCCAACTCCAGTACCCGC +
Preference number: 5 (lower is better)
Translates to: TVNGELDECAVGYQDAFFVMRRQ*SNSSTR
Trigger: GCGGGTACTGGAGTTGGACAACTGCCTCCTCATCAC...GAAGAATGCATCCTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS TCA 90 bp TGTCCCCAAGCAAGGAGTCTAGCTCCTCTCTTCTCTTACACCCCGTaGAGGCCTCTGGAGAATTATGCCTTCGGTTGGCAATTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: CPQARSLAPLFSYTP*RPLENYAFGWQFSE
Trigger: TTCAGAGAATTGCCAACCGAAGGCATAATTCTCCAGAGGCCTTCACGGGGTGTAAGAGAAGAGAGGAGCTAGACTCCTTGCTTGGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483037.5
CDS-3UTR CAA 90 bp CCTCGCAAGCTGAGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATTTTCCGGCCTTCATCATTGTTaGAGAAAACCATGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PRKLSFLRNPPHRFEIFSGLHHC*RKPWPK
Trigger: CTTCGGCCATGGTTTTCTCAAACAATGATGAAGGCC...GGAAAATATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAGCTTGCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp GCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGGCCTTCATCATTGTTaGAGAAAACCATGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: AASKICSRGQFKPRAVREGLHHC*RKPWPK
Trigger: CTTCGGCCATGGTTTTCTCAAACAATGATGAAGGCC...CTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp GAGCATCGGGCAGCCTCCAAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTATAAGGCCTTCATCATaGTTTGAGAAAACCATGGCC +
Preference number: 5 (lower is better)
Translates to: EHRAASKICSRGQFKPRAIRPSS*FEKTMA
Trigger: GGCCATGGTTTTCTCAAACAATGATGAAGGCCTTAT...AGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCCCGATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp ATGCAGCCTCGCAAGCTGAGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATCCAGATGTTTCAGCTaGGAACAGAATCTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: MQPRKLSFLRNPPHRFEISRCFS*EQNLLR
Trigger: CCTTAGCAGATTCTGTTCCAAGCTGAAACATCTGGA...TATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp GCAGCCTCGCAAGCTGAGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATTTCCAGATGTTTCAGCTaGGAACAGAATCTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: AASQAELPQESTASLRDISRCFS*EQNLLR
Trigger: CCTTAGCAGATTCTGTTCCAAGCTGAAACATCTGGA...AATATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CATATCTGCACCACACCTTCATCCGTGATACGTGAGCAGGACTGCAAGTTGAGGTGGAGAATCAACAGATaGGGTGATGGTGGAGTCGGT +
Preference number: 5 (lower is better)
Translates to: HICTTPSSVIREQDCKLRWRINR*GDGGVG
Trigger: ACCGACTCCACCATCACCCAATCTGTTGATTCTCCA...CCTCAACTTGCAGTCCTGCTCACGTATCACGGATGAAGGTGTGGTGCAGATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CAA 90 bp ATCCTTCGTGATCTGATCACACCAAGAGAGGTTCAGGTACTCCAGGTTTCGGCAGACTCCGAGCTGCTTTaGTTTTTGGTCCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: ILRDLITPREVQVLQVSADSELL*FLVPGG
Trigger: ACCTCCAGGGACCAAAAACAAAAGCAGCTCGGAGTC...TGCCGAAACCTGGAGTACCTGAACCTCTCTTGGTGTGATCAGATCACGAAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422741.5
CDS-3UTR CAA 90 bp AGGGCTTTCAGGCCTCGACAACCTCGCACCAGTGCCTCGATGCCATCCTTCGTGAAGTGTGTAAAACTTTaGAGTAGCTATGGTGTAACC +
Preference number: 5 (lower is better)
Translates to: RAFRPRQPRTSASMPSFVKCVKL*SSYGVT
Trigger: GGTTACACCATAGCTACTCAAAAGTTTTACACACTT...CACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422741.5
CDS-3UTR CAA 90 bp ATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTTGGGGGAGTGGTTGTTaGGAAGGGCCAGCCACCATG +
Preference number: 5 (lower is better)
Translates to: MLSMPRVELSYLGRYQSLWGSGC*EGPATM
Trigger: CATGGTGGCTGGCCCTTCCAAACAACCACTCCCCCA...AAGAGATTGGTACCTACCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp TGGCATGGTCCTAGCTGCATTGAGACCACTTGTCATGTGTTAACTGACACAAGGGATGGAGTCTCACTGTaGTCTCCTGGGCTGGATGGA +
Preference number: 5 (lower is better)
Translates to: WHGPSCIETTCHVLTDTRDGVSL*SPGLDG
Trigger: TCCATCCAGCCCAGGAGACAACAGTGAGACTCCATC...CCTTGTGTCAGTTAACACATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR CAA 90 bp ATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGAGGTCCAGATGTTTCAGCTaGGAACAGAATCTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: ICSRGQFKPRAVREASVRSRCFS*EQNLLR
Trigger: CCTTAGCAGATTCTGTTCCAAGCTGAAACATCTGGA...CCTCACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp AAGTGTAAAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCAAAATTTGGGCAGCCTCCAAAATTaGCAGTCGCGGACAGTTCAA +
Preference number: 5 (lower is better)
Translates to: KCKTCVSQMGASGSLQNLGSLQN*QSRTVQ
Trigger: TTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC...CAAATTTTGGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTTTACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp GAGTGTGCTGTCGGTTATCAGGATGCATTCTTCAAGATCCATCTTCTCCAATTCGTGATGAGGAGGCAGTaGTCCAACTCCAGTACCCGC +
Preference number: 5 (lower is better)
Translates to: ECAVGYQDAFFKIHLLQFVMRRQ*SNSSTR
Trigger: GCGGGTACTGGAGTTGGACAACTGCCTCCTCATCAC...GAATTGGAGAAGATGGATCTTGAAGAATGCATCCTGATAACCGACAGCACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCAGGAAGACTGGAGAATCAACAGATaGGGTGATGGTGGAGTCGGT +
Preference number: 5 (lower is better)
Translates to: LSQWRINRLGDGGVGQEDWRINR*GDGGVG
Trigger: ACCGACTCCACCATCACCCAATCTGTTGATTCTCCA...GTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp TTGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCTTCTAGAGGAAAGGATGATGGTCCTAGCTGCATaGAGACCACTTGTCATGTGT +
Preference number: 5 (lower is better)
Translates to: LGDGGVGQEDSGLLEERMMVLAA*RPLVMC
Trigger: ACACATGACAAGTGGTCTCAATGCAGCTAGGACCAT...CATCCTTTCCTCTAGAAGACCTGAGTCTTCCTGACCGACTCCACCATCACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp TGGCATGGTCCTAGCTGCATTGAGACCACTTGTCATGTGTTAACTGACACAAGGCCAAACAGCTTCTTGTaGTGGTGGGAGGGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: WHGPSCIETTCHVLTDTRPNSFL*WWEGSF
Trigger: GAAAGAGCCCTCCCACCACAACAAGAAGCTGTTTGG...CCTTGTGTCAGTTAACACATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451636.5
CDS CCA 90 bp CTGAGTTTAGTACATCACAAGAAATTCCGAAGGGGAGACCATGCCTaGGACCTCTTGGAGTCACCTATTTCTTGCTGGATCCAACGTGAC +
Preference number: 5 (lower is better)
Translates to: LSLVHHKKFRRGDHA*DLLESPISCWIQRD
Trigger: GTCACGTTGGATCCAGCAAGAAATAGGTGACTCCAAGAGGTCCCAGGCATGGTCTCCCCTTCGGAATTTCTTGTGATGTACTAAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471208.1
CDS-3UTR CAA 90 bp CGAGCTAAAAGTGTAAAACCTGCGTCAGTCAAATGGGAGCATCGGGCAGCCTCCATAAGGCCTTCATCATaGTTTGAGAAAACCATGGCC +
Preference number: 5 (lower is better)
Translates to: RAKSVKPASVKWEHRAASIRPSS*FEKTMA
Trigger: GGCCATGGTTTTCTCAAACAATGATGAAGGCCTTAT...GGAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTTTACACTTTTAGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp TCCAATTCGTGGCAATTCCGAGCTAAAAGTGTAAAACCTGCGTCAGTCAAATGGGAGCAGGACTGCAAGTaGAGGCTCACAAGCTCATGG +
Preference number: 5 (lower is better)
Translates to: SNSWQFRAKSVKPASVKWEQDCK*RLTSSW
Trigger: CCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCTC...CCATTTGACTGACGCAGGTTTTACACTTTTAGCTCGGAATTGCCACGAATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp CTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGTGGCCACAGGTACTGTaGCTCAGGTGCAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: LLPVNAFPNGESTDWVMVWPQVL*LRCRIP
Trigger: TGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCA...CACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS GCA 90 bp AACTCTGAGTTTAGTACATCACAAGAAATTCCGAAGGGGAGACCATaGCTGGGACCTCTTGGAGTCACCTATTTCTTGCTGGATCCAACG +
Preference number: 5 (lower is better)
Translates to: NSEFSTSQEIPKGRP*LGPLGVTYFLLDPT
Trigger: CGTTGGATCCAGCAAGAAATAGGTGACTCCAAGAGGTCCCAGGCATGGTCTCCCCTTCGGAATTTCTTGTGATGTACTAAACTCAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471208.1
CDS-3UTR CAA 90 bp ATGGTCTTTTTGAGGAATGCTGAGTATGCCAAGGGTAGAACTTTCGTACCTAGGGGCAGCCTCCAAAATTaGCAGTCGCGGACAGTTCAA +
Preference number: 5 (lower is better)
Translates to: MVFLRNAEYAKGRTFVPRGSLQN*QSRTVQ
Trigger: TTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC...CCTAGGTACGAAAGTTCTACCCTTGGCATACTCAGCATTCCTCAAAAAGACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp CTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCGTGATGAGGAGGCAGTaGTCCAACTCCAGTACCCGC +
Preference number: 5 (lower is better)
Translates to: LQSIQKSFTCKCLSQWRIVMRRQ*SNSSTR
Trigger: GCGGGTACTGGAGTTGGACAACTGCCTCCTCATCAC...GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp TGGCATGGTCCTAGCTGCATTGAGACCACTTGTCATGTGTTAACTGACACAAGGAAGATGTTCCAAGCCTaGGAAATCTGTGCACATCGG +
Preference number: 5 (lower is better)
Translates to: WHGPSCIETTCHVLTDTRKMFQA*EICAHR
Trigger: CCGATGTGCACAGATTTCCAAGGCTTGGAACATCTT...CCTTGTGTCAGTTAACACATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp CTTCAAGGAGGAATCCCCAACACCAATGCAGCCTCGCAAGCTGAGCTTCCTCAGTTTTATTGTTTATTGTaGTTATCCTGTCCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LQGGIPNTNAASQAELPQFYCLL*LSCPCS
Trigger: GGAGCAGGGACAGGATAACAACAATAAACAATAAAA...CTGAGGAAGCTCAGCTTGCGAGGCTGCATTGGTGTTGGGGATTCCTCCTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435207.5
CDS TCA 90 bp TCTGTAGTAGCAGCACAAAACAGACTGAGACATTTAATCAGGCAGTaGGGACCAAACACAAAGCCTTGGGGCCCTTTGGTTATGGGTTTG +
Preference number: 5 (lower is better)
Translates to: SVVAAQNRLRHLIRQ*GPNTKPWGPLVMGL
Trigger: CAAACCCATAACCAAAGGGCCCCAAGGCTTTGTGTTTGGTCCTCACTGCCTGATTAAATGTCTCAGTCTGTTTTGTGCTGCTACTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464990.1
CDS-3UTR CAA 90 bp AAGCTGAGCTTCCTCAGGAATCCACCGCATCGCTTCGAGATATTTTCCACCACTATAAGGCCTTCATCATaGTTTGAGAAAACCATGGCC +
Preference number: 5 (lower is better)
Translates to: KLSFLRNPPHRFEIFSTTIRPSS*FEKTMA
Trigger: GGCCATGGTTTTCTCAAACAATGATGAAGGCCTTAT...AGTGGTGGAAAATATCTCGAAGCGATGCGGTGGATTCCTGAGGAAGCTCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp ACCGCATCGCTTCGAGATATTTTCCACCACTCGACCCTCTACATCTGTTTGAAATCTATTCTTTGCCAGTaGCTTCCATCCAGGGCTAAG +
Preference number: 5 (lower is better)
Translates to: TASLRDIFHHSTLYICLKSILCQ*LPSRAK
Trigger: CTTAGCCCTGGATGGAAGCAACTGGCAAAGAATAGA...TTTCAAACAGATGTAGAGGGTCGAGTGGTGGAAAATATCTCGAAGCGATGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp TGGCATGGTCCTAGCTGCATTGAGACCACTTGTCATGTGTTAACTGACACAAGGTCCAGATGTTTCAGCTaGGAACAGAATCTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: WHGPSCIETTCHVLTDTRSRCFS*EQNLLR
Trigger: CCTTAGCAGATTCTGTTCCAAGCTGAAACATCTGGA...CCTTGTGTCAGTTAACACATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
CDS-3UTR CAA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGGAGCAGGACTGCAAGTaGAGGCTCACAAGCTCATGG +
Preference number: 5 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVEQDCK*RLTSSW
Trigger: CCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCTC...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp AACTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAAGAGGCATCTGTGAGGTaGCTGCAACCCGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: NCNPYRSLLPVNAFPNGEEASVR*LQPERQ
Trigger: CTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTC...TTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp TCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGAGAGGCATCTGTGAGGTaGCTGCAACCCGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: SIQKSFTCKCLSQWRINREASVR*LQPERQ
Trigger: CTGCCTTTCGGGTTGCAGCAACCTCACAGATGCCTC...TCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp GTATCCTGGCTCAAAAGAAATCAATCATGTATAGAAGGCTCTGGTGGTTTGTTTTGGCCACAGGTACTGTaGCTCAGGTGCAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: VSWLKRNQSCIEGSGGLFWPQVL*LRCRIP
Trigger: TGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCA...AAACAAACCACCAGAGCCTTCTATACATGATTGATTTCTTTTGAGCCAGGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR CAA 90 bp GGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTATGGCCACAGGTACTGTaGCTCAGGTGCAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: GENYHQSNCNPYRSLLPVWPQVL*LRCRIP
Trigger: TGGGATCCTGCACCTGAGCAACAGTACCTGTGGCCA...TACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp TTTAGGACAGTGAATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGGATGCAGAGCTGCTTTTGTTTTaGGTCCCTGGAGGTGTATAT +
Preference number: 5 (lower is better)
Translates to: FRTVNGELDECAVGYQDAELLLF*VPGGVY
Trigger: ATATACACCTCCAGGGACCAAAAACAAAAGCAGCTC...TGCATCCTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGTCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422741.5
CDS-3UTR CAA 90 bp AAAGGTGAAGACCCTGCTCCACCCAGTATAGAGTCCTCTTTTCTTTGGTGTCTCGAGCTGCTTTTGTTTTaGGTCCCTGGAGGTGTATAT +
Preference number: 5 (lower is better)
Translates to: KGEDPAPPSIESSFLWCLELLLF*VPGGVY
Trigger: ATATACACCTCCAGGGACCAAAAACAAAAGCAGCTC...GAGACACCAAAGAAAAGAGGACTCTATACTGGGTGGAGCAGGGTCTTCACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp GGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAGAGCAGGACTGCAAGTaGAGGCTCACAAGCTCATGG +
Preference number: 5 (lower is better)
Translates to: GENYHQSNCNPYRSLLPVEQDCK*RLTSSW
Trigger: CCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCTC...TACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp CTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCGGCAGCCTCCAAAATTaGCAGTCGCGGACAGTTCAA +
Preference number: 5 (lower is better)
Translates to: LQSIQKSFTCKCLSQWRIGSLQN*QSRTVQ
Trigger: TTGAACTGTCCGCGACTGCAAATTTTGGAGGCTGCC...GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp CAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTGTGATGAGGAGGCAGTaGTCCAACTCCAGTACCCGC +
Preference number: 5 (lower is better)
Translates to: QNKGENYHQSNCNPYRSLVMRRQ*SNSSTR
Trigger: GCGGGTACTGGAGTTGGACAACTGCCTCCTCATCAC...AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp TCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGACTCCGAGCTGCTTTaGTTTTTGGTCCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SFTCKCLSQWRINRLGDGDSELL*FLVPGG
Trigger: ACCTCCAGGGACCAAAAACAAAAGCAGCTCGGAGTC...ACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp GTTATCAGGATGCATTCTTCAAGATCCATCTTCTCCAATTCGTGGCAATTCCGATCTATTCTTTGCCAGTaGCTTCCATCCAGGGCTAAG +
Preference number: 5 (lower is better)
Translates to: VIRMHSSRSIFSNSWQFRSILCQ*LPSRAK
Trigger: CTTAGCCCTGGATGGAAGCAACTGGCAAAGAATAGA...TCGGAATTGCCACGAATTGGAGAAGATGGATCTTGAAGAATGCATCCTGATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421391.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp GTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTAAGAGATCCAGGTTTCTGTCTATTCTTTGCCAGTaGCTTCCATCCAGGGCTAAG +
Preference number: 5 (lower is better)
Translates to: VELSYLGRYQSLKRSRFLSILCQ*LPSRAK
Trigger: CTTAGCCCTGGATGGAAGCAACTGGCAAAGAATAGA...CAGAAACCTGGATCTCTTAAGAGATTGGTACCTACCTAGGTACGAAAGTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp GGCTTTGATTTGATTGTTTCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTGAGCAGGACTGCAAGTaGAGGCTCACAAGCTCATGG +
Preference number: 5 (lower is better)
Translates to: GFDLIVSQQNKGENYHQSEQDCK*RLTSSW
Trigger: CCATGAGCTTGTGAGCCTCAACTTGCAGTCCTGCTC...ACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGAAACAATCAAATCAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp GAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAAATGTGATGAGGAGGCAGTaGTCCAACTCCAGTACCCGC +
Preference number: 5 (lower is better)
Translates to: ENYHQSNCNPYRSLLPVNVMRRQ*SNSSTR
Trigger: GCGGGTACTGGAGTTGGACAACTGCCTCCTCATCAC...ATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp AGGACAGTGAATGGAGAGCTGGATGAGTGTGCTGTCGGTTATCAGGATGCATTCACACAAGGCTTTGATTaGATTGTTTCACAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: RTVNGELDECAVGYQDAFTQGFD*IVSQQN
Trigger: ATTCTGCTGTGAAACAATCAAATCAAAGCCTTGTGT...GAATGCATCCTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CAA 90 bp AAAATTTGCAGTCGCGGACAGTTCAAACCCAGGGCTGTAAGAGAGGCATCTGTGACACAAGGCTTTGATTaGATTGTTTCACAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: KICSRGQFKPRAVREASVTQGFD*IVSQQN
Trigger: ATTCTGCTGTGAAACAATCAAATCAAAGCCTTGTGT...CACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
CDS-3UTR CAA 90 bp GGTGAAGACCCTGCTCCACCCAGTATAGAGTCCTCTTTTCTTTGGTGTCTCATGACACAAGGCTTTGATTaGATTGTTTCACAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: GEDPAPPSIESSFLWCLMTQGFD*IVSQQN
Trigger: ATTCTGCTGTGAAACAATCAAATCAAAGCCTTGTGT...CATGAGACACCAAAGAAAAGAGGACTCTATACTGGGTGGAGCAGGGTCTTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp TCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAGACTCCGAGCTGCTTTaGTTTTTGGTCCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SQQNKGENYHQSNCNPYRDSELL*FLVPGG
Trigger: ACCTCCAGGGACCAAAAACAAAAGCAGCTCGGAGTC...TCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp TCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTCAGACTCACCAGGGCTaGCAGTTTAGGACAGTGAAT +
Preference number: 5 (lower is better)
Translates to: SFTCKCLSQWRINRLGDGQTHQG*QFRTVN
Trigger: ATTCACTGTCCTAAACTGCAAGCCCTGGTGAGTCTG...ACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451636.5
CDS-3UTR CAA 90 bp TGGCATGGTCCTAGCTGCATTGAGACCACTTGTCATGTGTTAACTGACACAAGGATTTGGAAAATGGTTTaGCTTGGATGTGTCTGCCAT +
Preference number: 5 (lower is better)
Translates to: WHGPSCIETTCHVLTDTRIWKMV*LGCVCH
Trigger: ATGGCAGACACATCCAAGCAAAACCATTTTCCAAAT...CCTTGTGTCAGTTAACACATGACAAGTGGTCTCAATGCAGCTAGGACCATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp GTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTGGAGTCGGTCTGCCTAATAAAGGTATaGGTAGTCATGGGAACACAT +
Preference number: 5 (lower is better)
Translates to: VNAFPNGESTDWVMVESVCLIKV*VVMGTH
Trigger: ATGTGTTCCCATGACTACCAATACCTTTATTAGGCA...GACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp TACTTTCCAATCAGGCAACACAGACTCCGAGCTGCTTTTGTTTTTGGTCCCTGGTGCCTAATAAAGGTATaGGTAGTCATGGGAACACAT +
Preference number: 5 (lower is better)
Translates to: YFPIRQHRLRAAFVFGPWCLIKV*VVMGTH
Trigger: ATGTGTTCCCATGACTACCAATACCTTTATTAGGCA...CCAGGGACCAAAAACAAAAGCAGCTCGGAGTCTGTGTTGCCTGATTGGAAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS CCA 90 bp CCAAACACAAAGCCTTGGGGCCCTTTGGTTATGGGTTTGCTACACTaGGAGTGGCTTCTCTCTTCTAATTGTGTAAAGATGGAAATAAAA +
Preference number: 5 (lower is better)
Translates to: PNTKPWGPLVMGLLH*EWLLSSNCVKMEIK
Trigger: TTTTATTTCCATCTTTACACAATTAGAAGAGAGAAGCCACTCCCAGTGTAGCAAACCCATAACCAAAGGGCCCCAAGGCTTTGTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464990.1
CDS-3UTR CAA 90 bp TCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATGGAGAATCAACAGATaGGGTGATGGTGGAGTCGGT +
Preference number: 5 (lower is better)
Translates to: SIQKSFTCKCLSQWRINRWRINR*GDGGVG
Trigger: ACCGACTCCACCATCACCCAATCTGTTGATTCTCCA...TCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp GTTTGTAATAGACACACAGGAGGTCAGATCCAGATGTTTCAGCTTGGAACAGAAACACTGATGGTCTTTTaGAGGAATGCTGAGTATGCC +
Preference number: 5 (lower is better)
Translates to: VCNRHTGGQIQMFQLGTETLMVF*RNAEYA
Trigger: GGCATACTCAGCATTCCTCAAAAAGACCATCAGTGT...TTCTGTTCCAAGCTGAAACATCTGGATCTGACCTCCTGTGTGTCTATTACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422741.5
ENST00000432809.5
CDS-3UTR CAA 90 bp GTAGAACTTTCGTACCTAGGTAGGTACCAATCTCTTAAGAGATCCAGGTTTCTGGCTCATTTATTGAAGTaGCTTCCTGCATCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: VELSYLGRYQSLKRSRFLAHLLK*LPASVL
Trigger: GAGGACTGATGCAGGAAGCAACTTCAATAAATGAGC...CAGAAACCTGGATCTCTTAAGAGATTGGTACCTACCTAGGTACGAAAGTTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS CCA 90 bp ACAAAGCCTTGGGGCCCTTTGGTTATGGGTTTGCTACACTGGGAGTaGCTTCTCTCTTCTAATTGTGTAAAGATGGAAATAAAATCTTCA +
Preference number: 5 (lower is better)
Translates to: TKPWGPLVMGLLHWE*LLSSNCVKMEIKSS
Trigger: TGAAGATTTTATTTCCATCTTTACACAATTAGAAGAGAGAAGCCACTCCCAGTGTAGCAAACCCATAACCAAAGGGCCCCAAGGCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464990.1
CDS-3UTR CAA 90 bp GGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAGGCCTTCATCATTGTTaGAGAAAACCATGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: GENYHQSNCNPYRSLLPVGLHHC*RKPWPK
Trigger: CTTCGGCCATGGTTTTCTCAAACAATGATGAAGGCC...TACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp GGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTATCTATTCTTTGCCAGTaGCTTCCATCCAGGGCTAAG +
Preference number: 5 (lower is better)
Translates to: GENYHQSNCNPYRSLLPVSILCQ*LPSRAK
Trigger: CTTAGCCCTGGATGGAAGCAACTGGCAAAGAATAGA...TACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp TCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGATGGTTCCAGATGTTTCAGCTaGGAACAGAATCTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: SFTCKCLSQWRINRLGDGSRCFS*EQNLLR
Trigger: CCTTAGCAGATTCTGTTCCAAGCTGAAACATCTGGA...ACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
CDS-3UTR CAA 90 bp CAGAATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTGGAGAATCAACAGATaGGGTGATGGTGGAGTCGGT +
Preference number: 5 (lower is better)
Translates to: QNKGENYHQSNCNPYRSLWRINR*GDGGVG
Trigger: ACCGACTCCACCATCACCCAATCTGTTGATTCTCCA...AAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp TGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAATGGTCCTAGCTGCATaGAGACCACTTGTCATGTGT +
Preference number: 5 (lower is better)
Translates to: CNPYRSLLPVNAFPNGESMVLAA*RPLVMC
Trigger: ACACATGACAAGTGGTCTCAATGCAGCTAGGACCAT...TGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGACACTGATGGTCTTTTaGAGGAATGCTGAGTATGCC +
Preference number: 5 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVTLMVF*RNAEYA
Trigger: GGCATACTCAGCATTCCTCAAAAAGACCATCAGTGT...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp GGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAAAGATGTTCCAAGCCTaGGAAATCTGTGCACATCGG +
Preference number: 5 (lower is better)
Translates to: GENYHQSNCNPYRSLLPVKMFQA*EICAHR
Trigger: CCGATGTGCACAGATTTCCAAGGCTTGGAACATCTT...TACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421391.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp CGTGCCCAGCCTGCAAACCTGATTTTCTTACAAGAGGTTCTCCTGTTTTGTAAAATTTGGAAAATGGTTTaGCTTGGATGTGTCTGCCAT +
Preference number: 5 (lower is better)
Translates to: RAQPANLIFLQEVLLFCKIWKMV*LGCVCH
Trigger: ATGGCAGACACATCCAAGCAAAACCATTTTCCAAAT...TTTACAAAACAGGAGAACCTCTTGTAAGAAAATCAGGTTTGCAGGCTGGGCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR CAA 90 bp TGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCATCCAGATGTTTCAGCTaGGAACAGAATCTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: CNPYRSLLPVNAFPNGESSRCFS*EQNLLR
Trigger: CCTTAGCAGATTCTGTTCCAAGCTGAAACATCTGGA...TGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
CDS-3UTR CAA 90 bp GTGATTTTTGTGCATCCATTGAGGTTCAAATGTTCAATGTTTCGGCAGTTCTGTTCCAGATGTTTCAGCTaGGAACAGAATCTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: VIFVHPLRFKCSMFRQFCSRCFS*EQNLLR
Trigger: CCTTAGCAGATTCTGTTCCAAGCTGAAACATCTGGA...ACAGAACTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAAATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000422741.5
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp AACTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAAACACTGATGGTCTTTTaGAGGAATGCTGAGTATGCC +
Preference number: 5 (lower is better)
Translates to: NCNPYRSLLPVNAFPNGETLMVF*RNAEYA
Trigger: GGCATACTCAGCATTCCTCAAAAAGACCATCAGTGT...TTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp TCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGAGAGCTGCTTTTGTTTTaGGTCCCTGGAGGTGTATAT +
Preference number: 5 (lower is better)
Translates to: SIQKSFTCKCLSQWRINRELLLF*VPGGVY
Trigger: ATATACACCTCCAGGGACCAAAAACAAAAGCAGCTC...TCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGTCATGGGAACACATCTaGCTTTTGCCGTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVSWEHI*LLPFHF
Trigger: AAAGTGAAACGGCAAAAGCAAGATGTGTTCCCATGA...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp CAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTTCATGGGAACACATCTaGCTTTTGCCGTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: QKSFTCKCLSQWRINRLGSWEHI*LLPFHF
Trigger: AAAGTGAAACGGCAAAAGCAAGATGTGTTCCCATGA...ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp CTGCAATCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCGTGACTGATGATAGGTaGTATCCTGGCTCAAAAGAA +
Preference number: 5 (lower is better)
Translates to: LQSIQKSFTCKCLSQWRIVTDDR*YPGSKE
Trigger: TTCTTTTGAGCCAGGATACAACCTATCATCAGTCAC...GATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGATTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484457.6
CDS-3UTR CAA 90 bp GTGATTTTTGTGCATCCATTGAGGTTCAAATGTTCAATGTTTCGGCAGTTCTGTATAAGGCCTTCATCATaGTTTGAGAAAACCATGGCC +
Preference number: 5 (lower is better)
Translates to: VIFVHPLRFKCSMFRQFCIRPSS*FEKTMA
Trigger: GGCCATGGTTTTCTCAAACAATGATGAAGGCCTTAT...ACAGAACTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAAATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000422741.5
ENST00000425973.5
ENST00000435207.5
ENST00000451636.5
CDS-3UTR CAA 90 bp TCCATACAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGAATAAGGCCTTCATCATaGTTTGAGAAAACCATGGCC +
Preference number: 5 (lower is better)
Translates to: SIQKSFTCKCLSQWRINRIRPSS*FEKTMA
Trigger: GGCCATGGTTTTCTCAAACAATGATGAAGGCCTTAT...TCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTGTATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp GGCTTTGATTTGATTGTTTCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTATAAGGCCTTCATCATaGTTTGAGAAAACCATGGCC +
Preference number: 5 (lower is better)
Translates to: GFDLIVSQQNKGENYHQSIRPSS*FEKTMA
Trigger: GGCCATGGTTTTCTCAAACAATGATGAAGGCCTTAT...ACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGAAACAATCAAATCAAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp GAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACCTGTAAATACACTGATGGTCTTTTaGAGGAATGCTGAGTATGCC +
Preference number: 5 (lower is better)
Translates to: ENYHQSNCNPYRSLLPVNTLMVF*RNAEYA
Trigger: GGCATACTCAGCATTCCTCAAAAAGACCATCAGTGT...ATTTACAGGTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000422741.5
ENST00000432809.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp CAGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTAAGTGTGTAAAACTTTaGAGTAGCTATGGTGTAACC +
Preference number: 5 (lower is better)
Translates to: QKSFTCKCLSQWRINRLGKCVKL*SSYGVT
Trigger: GGTTACACCATAGCTACTCAAAAGTTTTACACACTT...ACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp AGAAGTCTTTTACCTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTGGGTGAAGTGTGTAAAACTTTaGAGTAGCTATGGTGTAACC +
Preference number: 5 (lower is better)
Translates to: RSLLPVNAFPNGESTDWVKCVKL*SSYGVT
Trigger: GGTTACACCATAGCTACTCAAAAGTTTTACACACTT...CACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGGTAAAAGACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422741.5
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp ATAAAGGTGAAAACTATCACCAGAGTAACTGCAATCCATACAGAAGTCTTTTACGCTCATTTATTGAAGTaGCTTCCTGCATCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: IKVKTITRVTAIHTEVFYAHLLK*LPASVL
Trigger: GAGGACTGATGCAGGAAGCAACTTCAATAAATGAGC...GTAAAAGACTTCTGTATGGATTGCAGTTACTCTGGTGATAGTTTTCACCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484457.6
ENST00000538892.5
CDS-3UTR CAA 90 bp GGCTTTGATTTGATTGTTTCACAGCAGAATAAAGGTGAAAACTATCACCAGAGTACACAAGGCTTTGATTaGATTGTTTCACAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: GFDLIVSQQNKGENYHQSTQGFD*IVSQQN
Trigger: ATTCTGCTGTGAAACAATCAAATCAAAGCCTTGTGT...ACTCTGGTGATAGTTTTCACCTTTATTCTGCTGTGAAACAATCAAATCAAAGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421391.5
ENST00000422741.5
ENST00000432809.5
ENST00000451636.5
ENST00000484457.6
ENST00000538892.5
CDS CCA 72 bp GGCAGTGAGGACCAAACACAAAGCCTTGGGGCCCTTTaGTTATGGGTTTGCTACACTGGGAGTGGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: GSEDQTQSLGAL*LWVCYTGSGFS
Trigger: AGAGAAGCCACTCCCAGTGTAGCAAACCCATAACCAAAGGGCCCCAAGGCTTTGTGTTTGGTCCTCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464990.1
CDS TCA 72 bp GCCTCTGGAGAATTATGCCTTCGGTTGGCAATTCTCTaGACTTGTCTGTTCAAGCCAGCACCTCCGCCGAGT +
Preference number: 6 (lower is better)
Translates to: ASGELCLRLAIL*TCLFKPAPPPS
Trigger: ACTCGGCGGAGGTGCTGGCTTGAACAGACAAGTTCAGAGAATTGCCAACCGAAGGCATAATTCTCCAGAGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483037.5
CDS TCA 72 bp GCAAGGAGTCTAGCTCCTCTCTTCTCTTACACCCCGTaGAGGCCTCTGGAGAATTATGCCTTCGGTTGGCAA +
Preference number: 6 (lower is better)
Translates to: ARSLAPLFSYTP*RPLENYAFGWQ
Trigger: TTGCCAACCGAAGGCATAATTCTCCAGAGGCCTTCACGGGGTGTAAGAGAAGAGAGGAGCTAGACTCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483037.5
CDS CAA 72 bp AAGAAATTCCGAAGGGGAGACCATGCCTGGGACCTCTaGGAGTCACCTATTTCTTGCTGGATCCAACGTGAC +
Preference number: 6 (lower is better)
Translates to: KKFRRGDHAWDL*ESPISCWIQRD
Trigger: GTCACGTTGGATCCAGCAAGAAATAGGTGACTCCAAGAGGTCCCAGGCATGGTCTCCCCTTCGGAATTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471208.1
CDS CAA 90 bp CAGACTGAGACATTTAATCAGGCAGTGAGGACCAAACACAAAGCCTaGGGGCCCTTTGGTTATGGGTTTGCTACACTGGGAGTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: QTETFNQAVRTKHKA*GPFGYGFATLGVAS
Trigger: AGAAGCCACTCCCAGTGTAGCAAACCCATAACCAAAGGGCCCCAAGGCTTTGTGTTTGGTCCTCACTGCCTGATTAAATGTCTCAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464990.1
CDS CCA 72 bp GTACATCACAAGAAATTCCGAAGGGGAGACCATGCCTaGGACCTCTTGGAGTCACCTATTTCTTGCTGGATC +
Preference number: 6 (lower is better)
Translates to: VHHKKFRRGDHA*DLLESPISCWI
Trigger: GATCCAGCAAGAAATAGGTGACTCCAAGAGGTCCCAGGCATGGTCTCCCCTTCGGAATTTCTTGTGATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471208.1
CDS TCA 72 bp GCAGCACAAAACAGACTGAGACATTTAATCAGGCAGTaGGGACCAAACACAAAGCCTTGGGGCCCTTTGGTT +
Preference number: 6 (lower is better)
Translates to: AAQNRLRHLIRQ*GPNTKPWGPLV
Trigger: AACCAAAGGGCCCCAAGGCTTTGTGTTTGGTCCTCACTGCCTGATTAAATGTCTCAGTCTGTTTTGTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464990.1
CDS GCA 72 bp CAAACACAAAGCCTTGGGGCCCTTTGGTTATGGGTTTaGTACACTGGGAGTGGCTTCTCTCTTCTAATTGTG +
Preference number: 6 (lower is better)
Translates to: QTQSLGALWLWV*YTGSGFSLLIV
Trigger: CACAATTAGAAGAGAGAAGCCACTCCCAGTGTAGCAAACCCATAACCAAAGGGCCCCAAGGCTTTGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464990.1
CDS CCA 72 bp CCGAACTCCTATTCCAATGTACTAATTGAAGGCCCATaGGAAAAGTTGGCAGGTAGGTGTAGTCCTGCACTG +
Preference number: 6 (lower is better)
Translates to: PNSYSNVLIEGP*EKLAGRCSPAL
Trigger: CAGTGCAGGACTACACCTACCTGCCAACTTTTCCCATGGGCCTTCAATTAGTACATTGGAATAGGAGTTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464164.5
ENST00000493778.5
CDS CCA 72 bp ACTGTAAATGCCTTTCCCAATGGAGAATCAACAGATTaGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTC +
Preference number: 6 (lower is better)
Translates to: TVNAFPNGESTD*VMVESVRKTQV
Trigger: GACCTGAGTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463736.5
CDS CAA 72 bp CCAAACACAAAGCCTTGGGGCCCTTTGGTTATGGGTTaGCTACACTGGGAGTGGCTTCTCTCTTCTAATTGT +
Preference number: 6 (lower is better)
Translates to: PNTKPWGPLVMG*LHWEWLLSSNC
Trigger: ACAATTAGAAGAGAGAAGCCACTCCCAGTGTAGCAAACCCATAACCAAAGGGCCCCAAGGCTTTGTGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464990.1
CDS CAA 72 bp ACATTTAATCAGGCAGTGAGGACCAAACACAAAGCCTaGGGGCCCTTTGGTTATGGGTTTGCTACACTGGGA +
Preference number: 6 (lower is better)
Translates to: TFNQAVRTKHKA*GPFGYGFATLG
Trigger: TCCCAGTGTAGCAAACCCATAACCAAAGGGCCCCAAGGCTTTGTGTTTGGTCCTCACTGCCTGATTAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464990.1
CDS CAA 90 bp CTGTTGGGAAACTGTAAATGCCTTTCCCAATGGAGAATCAACAGATaGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGTCTTCTAGAG +
Preference number: 6 (lower is better)
Translates to: LLGNCKCLSQWRINR*GDGGVGQEDSGLLE
Trigger: CTCTAGAAGACCTGAGTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGTTTCCCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463736.5
CDS GCA 72 bp TTTAGTACATCACAAGAAATTCCGAAGGGGAGACCATaGCTGGGACCTCTTGGAGTCACCTATTTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: FSTSQEIPKGRP*LGPLGVTYFLL
Trigger: CAGCAAGAAATAGGTGACTCCAAGAGGTCCCAGGCATGGTCTCCCCTTCGGAATTTCTTGTGATGTACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471208.1
CDS CCA 72 bp AAGCCTTGGGGCCCTTTGGTTATGGGTTTGCTACACTaGGAGTGGCTTCTCTCTTCTAATTGTGTAAAGATG +
Preference number: 6 (lower is better)
Translates to: KPWGPLVMGLLH*EWLLSSNCVKM
Trigger: CATCTTTACACAATTAGAAGAGAGAAGCCACTCCCAGTGTAGCAAACCCATAACCAAAGGGCCCCAAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464990.1
CDS CAA 72 bp AACTGTAAATGCCTTTCCCAATGGAGAATCAACAGATaGGGTGATGGTGGAGTCGGTCAGGAAGACTCAGGT +
Preference number: 6 (lower is better)
Translates to: NCKCLSQWRINR*GDGGVGQEDSG
Trigger: ACCTGAGTCTTCCTGACCGACTCCACCATCACCCAATCTGTTGATTCTCCATTGGGAAAGGCATTTACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463736.5
CDS CCA 72 bp CATTCAGTCATGAAGAGGAACTTCCTCATTGATCTGTaGGTTGGTAGCAAGGCCAGAAGCAGCACATTAAAA +
Preference number: 6 (lower is better)
Translates to: HSVMKRNFLIDL*VGSKARSSTLK
Trigger: TTTTAATGTGCTGCTTCTGGCCTTGCTACCAACCCACAGATCAATGAGGAAGTTCCTCTTCATGACTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463698.5
CDS CAA 72 bp TCTTTGGGTAACTTTTTGTTAATAAGGCCTTCATCATaGTTTGAGAAAACCATGGCCGAAGAGCCGCGAGCG +
Preference number: 6 (lower is better)
Translates to: SLGNFLLIRPSS*FEKTMAEEPRA
Trigger: CGCTCGCGGCTCTTCGGCCATGGTTTTCTCAAACAATGATGAAGGCCTTATTAACAAAAAGTTACCCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000283627.10
ENST00000421391.5
ENST00000422741.5
ENST00000425973.5
ENST00000432809.5
ENST00000435207.5
ENST00000451636.5
ENST00000463736.5
ENST00000484457.6
ENST00000497411.5
ENST00000538892.5
CDS CAA 72 bp GATAGCAGGATTTGTCCTGGGGAACAGACCACTGAGTaGATATTTGAAGGATTAGGAGCTAATCCTAGGAAA +
Preference number: 6 (lower is better)
Translates to: DSRICPGEQTTE*IFEGLGANPRK
Trigger: TTTCCTAGGATTAGCTCCTAATCCTTCAAATATCAACTCAGTGGTCTGTTCCCCAGGACAAATCCTGCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464990.1
CDS CAA 90 bp AGAGCATATGATAGCAGGATTTGTCCTGGGGAACAGACCACTGAGTaGATATTTGAAGGATTAGGAGCTAATCCTAGGAAAGAGAGCAAA +
Preference number: 6 (lower is better)
Translates to: RAYDSRICPGEQTTE*IFEGLGANPRKESK
Trigger: TTTGCTCTCTTTCCTAGGATTAGCTCCTAATCCTTCAAATATCAACTCAGTGGTCTGTTCCCCAGGACAAATCCTGCTATCATATGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464990.1
CDS CAA 90 bp GGATCCAACGTGACCATTAAGAAGGTTTCCAGAATGTTCATAGCTTaGGGTATTTCTCTTGACACAAACAATGGGCACTCTTACCTGATC +
Preference number: 6 (lower is better)
Translates to: GSNVTIKKVSRMFIA*GISLDTNNGHSYLI
Trigger: GATCAGGTAAGAGTGCCCATTGTTTGTGTCAAGAGAAATACCCAAAGCTATGAACATTCTGGAAACCTTCTTAATGGTCACGTTGGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471208.1
CDS TCA 72 bp GAGATAGATGTAGTACTGTACACAGTTGATGTATTTTaGTGCTGGGCCTGTCTGGTCTGTCTTGAGGATTAT +
Preference number: 6 (lower is better)
Translates to: EIDVVLYTVDVF*CWACLVCLEDY
Trigger: ATAATCCTCAAGACAGACCAGACAGGCCCAGCATCAAAATACATCAACTGTGTACAGTACTACATCTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463736.5
CDS CAA 72 bp GTGACCATTAAGAAGGTTTCCAGAATGTTCATAGCTTaGGGTATTTCTCTTGACACAAACAATGGGCACTCT +
Preference number: 6 (lower is better)
Translates to: VTIKKVSRMFIA*GISLDTNNGHS
Trigger: AGAGTGCCCATTGTTTGTGTCAAGAGAAATACCCAAAGCTATGAACATTCTGGAAACCTTCTTAATGGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471208.1
CDS CAA 72 bp TCTTTGGGTAACTTTTTGTTAATAAGGCCTTCATCATaGTTTGAGAAAACCTCAGCAGGACCCTTCTTAGCT +
Preference number: 6 (lower is better)
Translates to: SLGNFLLIRPSS*FEKTSAGPFLA
Trigger: AGCTAAGAAGGGTCCTGCTGAGGTTTTCTCAAACAATGATGAAGGCCTTATTAACAAAAAGTTACCCAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464164.5
ENST00000493778.5
CDS TCA 72 bp CTCTTAAGTTCTCTATATCAAAAACAGTTTCAGACCTaGCAGTTTCCCCCAGTGCATATCAAATGTAAGATT +
Preference number: 6 (lower is better)
Translates to: LLSSLYQKQFQT*QFPPVHIKCKI
Trigger: AATCTTACATTTGATATGCACTGGGGGAAACTGTCAGGTCTGAAACTGTTTTTGATATAGAGAACTTAAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464990.1