RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXL18 (Homo sapiens)

Ensembl gene IDs: ENSG00000155034

Ensembl transcript IDs: ENST00000382368.8, ENST00000415009.5, ENST00000453700.7, ENST00000458142.1, ENST00000620087.1

Found 1001 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGCACTGCGTaGATGGCCGGCTGGGCGGGCGCGCGGTCGGCGCGCGGCGCGGAG +
Preference number: 1 (lower is better)
Translates to: CTPTRTFLPKPRGTA*MAGWAGARSARGAE
Trigger: CTCCGCGCCGCGCGCCGACCGCGCGCCCGCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR GCA 90 bp GGACTGCACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGCACTaGGTGCATGGCCGGCTGGGCGGGCGCGCGGTCGGCGCGCGGCGC +
Preference number: 1 (lower is better)
Translates to: GLHAHTHFLAKAARH*VHGRLGGRAVGARR
Trigger: GCGCCGCGCGCCGACCGCGCGCCCGCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCAGTCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR CCA 90 bp GGCCACCTTCGGAAGCCTGGTGGAGCCGAGTGTTGCCTGGTGACGTaGAGCAGGAGGCGGGGCGGAGGCTGCGGGACACGGGGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: GHLRKPGGAECCLVT*SRRRGGGCGTRGCR
Trigger: CCTGCAGCCCCGTGTCCCGCAGCCTCCGCCCCGCCTCCTGCTCCACGTCACCAGGCAACACTCGGCTCCACCAGGCTTCCGAAGGTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 90 bp CCGAGAAGGGGCTGGGACAGGACTGCACGCCCACACGCACTTTCTTaGCAAAGCCGCGCGGCACTGCGTGCATGGCCGGCTGGGCGGGCG +
Preference number: 1 (lower is better)
Translates to: PRRGWDRTARPHALS*QSRAALRAWPAGRA
Trigger: CGCCCGCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR GCA 90 bp GAGGGCTGGGGGCACGCCTGGCCCGAGAAGGGGCTGGGACAGGACTaGACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGCACTGCG +
Preference number: 1 (lower is better)
Translates to: EGWGHAWPEKGLGQD*TPTRTFLPKPRGTA
Trigger: CGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCCAGGCGTGCCCCCAGCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR GCA 90 bp GGGGATCAAGGTCCCCGCATCCAGGCCTCCAGCACCCTCCATCCCTaGAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGG +
Preference number: 1 (lower is better)
Translates to: GDQGPRIQASSTLHP*RSTAGTAKAGALVW
Trigger: CCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGAGGGTGCTGGAGGCCTGGATGCGGGGACCTTGATCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp CCCCTGGGTCCAACGGCCTGTGGCTCTGGGTCCGGACCCAGGGTGTaGTTGAGGGAGGGCGCTGCTGAGCTGGCAGGCAACCCTTGTGTG +
Preference number: 1 (lower is better)
Translates to: PLGPTACGSGSGPRV*LREGAAELAGNPCV
Trigger: CACACAAGGGTTGCCTGCCAGCTCAGCAGCGCCCTCCCTCAACCACACCCTGGGTCCGGACCCAGAGCCACAGGCCGTTGGACCCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 90 bp CCAGGTGGGGCGTGGCTGGCCGGGAGAGAGGCCCCCTTCCTCTTGTaGCAAACCAAGGGTCCCTGGCGTCCCAGGCTCCTGCAGCTTCTC +
Preference number: 1 (lower is better)
Translates to: PGGAWLAGREAPFLL*QTKGPWRPRLLQLL
Trigger: GAGAAGCTGCAGGAGCCTGGGACGCCAGGGACCCTTGGTTTGTCACAAGAGGAAGGGGGCCTCTCTCCCGGCCAGCCACGCCCCACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR TCA 90 bp CAAGGGTCCCTGGCGTCCCAGGCTCCTGCAGCTTCTCGAGGTGACTaGGACCGATGGGCGGCGGCTCCGCCTCTCACCACCACAGGTTCG +
Preference number: 1 (lower is better)
Translates to: QGSLASQAPAASRGD*DRWAAAPPLTTTGS
Trigger: CGAACCTGTGGTGGTGAGAGGCGGAGCCGCCGCCCATCGGTCTCAGTCACCTCGAGAAGCTGCAGGAGCCTGGGACGCCAGGGACCCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620087.1
3UTR CCA 90 bp GGGGTGTGGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTaGGAGGCGAAGGCTTGGTCTGGTGTGGGTCCCACCATCGGGCAC +
Preference number: 1 (lower is better)
Translates to: GVWLSQAMTGGPGGL*EAKAWSGVGPTIGH
Trigger: GTGCCCGATGGTGGGACCCACACCAGACCAAGCCTTCGCCTCCCAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp AGCTGGTCCTGCGGCCTGCAGACTAGGAGACGGGGCCTAGGGGTGTaGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTGGGAG +
Preference number: 1 (lower is better)
Translates to: SWSCGLQTRRRGLGV*LSQAMTGGPGGLWE
Trigger: CTCCCAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCCTAGGCCCCGTCTCCTAGTCTGCAGGCCGCAGGACCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTaGTCTGGAGCTTCATTGGCCGGCAGGGGCCCAGCCCTCAGCTGT +
Preference number: 1 (lower is better)
Translates to: SIPAGALLAPPRPEH*SGASLAGRGPALSC
Trigger: ACAGCTGAGGGCTGGGCCCCTGCCGGCCAATGAAGCTCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp CACCCTCCCTCCACCCCAGACACATCAGCACAGCGGTCCAGGCTCTaGCTCACTCCCCGGGAGGCTTCTGTGGCCAGGGTTCCCATGGCG +
Preference number: 1 (lower is better)
Translates to: HPPSTPDTSAQRSRL*LTPREASVARVPMA
Trigger: CGCCATGGGAACCCTGGCCACAGAAGCCTCCCGGGGAGTGAGCCAGAGCCTGGACCGCTGTGCTGATGTGTCTGGGGTGGAGGGAGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp GGGAAGGGCAGGTTCTTCAGCAGAGACCAGAACACGGAGGAGGGCTaGGGGCACGCCTGGCCCGAGAAGGGGCTGGGACAGGACTGCACG +
Preference number: 1 (lower is better)
Translates to: GKGRFFSRDQNTEEG*GHAWPEKGLGQDCT
Trigger: CGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCCAGGCGTGCCCCCAGCCCTCCTCCGTGTTCTGGTCTCTGCTGAAGAACCTGCCCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR TCA 90 bp AAACCAAGGGTCCCTGGCGTCCCAGGCTCCTGCAGCTTCTCGAGGTaGCTGAGACCGATGGGCGGCGGCTCCGCCTCTCACCACCACAGG +
Preference number: 1 (lower is better)
Translates to: KPRVPGVPGSCSFSR*LRPMGGGSASHHHR
Trigger: CCTGTGGTGGTGAGAGGCGGAGCCGCCGCCCATCGGTCTCAGTCACCTCGAGAAGCTGCAGGAGCCTGGGACGCCAGGGACCCTTGGTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620087.1
3UTR GCA 90 bp TCCCCGCATCCAGGCCTCCAGCACCCTCCATCCCTGCAGGAGCACTaGTGGCACCGCCAAGGCCGGAGCACTGGTCTGGAGCTTCATTGG +
Preference number: 1 (lower is better)
Translates to: SPHPGLQHPPSLQEH*WHRQGRSTGLELHW
Trigger: CCAATGAAGCTCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGAGGGTGCTGGAGGCCTGGATGCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp GAACCTCCCAGGCCACTCGCCCCTGCCTGGTCGGAGAGCAAGAAGTaGTCAGTCCCAGGAGGCACCACACCACCCGATCTGATCGCCGCG +
Preference number: 1 (lower is better)
Translates to: EPPRPLAPAWSESKK*SVPGGTTPPDLIAA
Trigger: CGCGGCGATCAGATCGGGTGGTGTGGTGCCTCCTGGGACTGACCACTTCTTGCTCTCCGACCAGGCAGGGGCGAGTGGCCTGGGAGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp TCATCAGGCTCAAGTGCCTGCTCTGGGCCACCTTCGGAAGCCTGGTaGAGCCGAGTGTTGCCTGGTGACGTGGAGCAGGAGGCGGGGCGG +
Preference number: 1 (lower is better)
Translates to: SSGSSACSGPPSEAW*SRVLPGDVEQEAGR
Trigger: CCGCCCCGCCTCCTGCTCCACGTCACCAGGCAACACTCGGCTCCACCAGGCTTCCGAAGGTGGCCCAGAGCAGGCACTTGAGCCTGATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp GGGTCATCAGGCTCAAGTGCCTGCTCTGGGCCACCTTCGGAAGCCTaGTGGAGCCGAGTGTTGCCTGGTGACGTGGAGCAGGAGGCGGGG +
Preference number: 1 (lower is better)
Translates to: GSSGSSACSGPPSEA*WSRVLPGDVEQEAG
Trigger: CCCCGCCTCCTGCTCCACGTCACCAGGCAACACTCGGCTCCACCAGGCTTCCGAAGGTGGCCCAGAGCAGGCACTTGAGCCTGATGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp TGGTCTGGAGCTTCATTGGCCGGCAGGGGCCCAGCCCTCAGCTGTTaGAGCCCTACGGCTCTAGGTCTGGCCCCTCCACAAGCCCTCCAG +
Preference number: 1 (lower is better)
Translates to: WSGASLAGRGPALSC*SPTALGLAPPQALQ
Trigger: CTGGAGGGCTTGTGGAGGGGCCAGACCTAGAGCCGTAGGGCTCCAACAGCTGAGGGCTGGGCCCCTGCCGGCCAATGAAGCTCCAGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp GGCTCTGGCTCACTCCCCGGGAGGCTTCTGTGGCCAGGGTTCCCATaGCGGGTCTGGTGGCAACAGCTTGGAGAAAAGCCTCCCGGGACC +
Preference number: 1 (lower is better)
Translates to: GSGSLPGRLLWPGFP*RVWWQQLGEKPPGT
Trigger: GGTCCCGGGAGGCTTTTCTCCAAGCTGTTGCCACCAGACCCGCCATGGGAACCCTGGCCACAGAAGCCTCCCGGGGAGTGAGCCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 90 bp TGGGTCCAACGGCCTGTGGCTCTGGGTCCGGACCCAGGGTGTGGTTaGGGGAGGGCGCTGCTGAGCTGGCAGGCAACCCTTGTGTGTTTG +
Preference number: 1 (lower is better)
Translates to: WVQRPVALGPDPGCG*GRALLSWQATLVCL
Trigger: CAAACACACAAGGGTTGCCTGCCAGCTCAGCAGCGCCCTCCCTCAACCACACCCTGGGTCCGGACCCAGAGCCACAGGCCGTTGGACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp CAGGAGGGCCAGGAGGCCTCTGGGAGGCGAAGGCTTGGTCTGGTGTaGGTCCCACCATCGGGCACTGCTGGAATCAGCCTGCAGAAGGGT +
Preference number: 1 (lower is better)
Translates to: QEGQEASGRRRLGLV*VPPSGTAGISLQKG
Trigger: ACCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGACCCACACCAGACCAAGCCTTCGCCTCCCAGAGGCCTCCTGGCCCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp CAGGCCATGACAGGAGGGCCAGGAGGCCTCTGGGAGGCGAAGGCTTaGTCTGGTGTGGGTCCCACCATCGGGCACTGCTGGAATCAGCCT +
Preference number: 1 (lower is better)
Translates to: QAMTGGPGGLWEAKA*SGVGPTIGHCWNQP
Trigger: AGGCTGATTCCAGCAGTGCCCGATGGTGGGACCCACACCAGACCAAGCCTTCGCCTCCCAGAGGCCTCCTGGCCCTCCTGTCATGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp CAGCACAGCGGTCCAGGCTCTGGCTCACTCCCCGGGAGGCTTCTGTaGCCAGGGTTCCCATGGCGGGTCTGGTGGCAACAGCTTGGAGAA +
Preference number: 1 (lower is better)
Translates to: QHSGPGSGSLPGRLL*PGFPWRVWWQQLGE
Trigger: TTCTCCAAGCTGTTGCCACCAGACCCGCCATGGGAACCCTGGCCACAGAAGCCTCCCGGGGAGTGAGCCAGAGCCTGGACCGCTGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 90 bp CCCCAGCGTCGTGGTCAAGGCTACCAGGAACTGGCAGCAGCGCTCTaGCCACGTCCACAGGAAGTGGCCGACGTCTCCTCTGCCTTTGGT +
Preference number: 1 (lower is better)
Translates to: PQRRGQGYQELAAAL*PRPQEVADVSSAFG
Trigger: ACCAAAGGCAGAGGAGACGTCGGCCACTTCCTGTGGACGTGGGCAGAGCGCTGCTGCCAGTTCCTGGTAGCCTTGACCACGACGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp CTCTGGCCAGGAGGCAAAGGTTCTGCACTGGGTGCAGCCTGGGGCTaGGAGAGGACCCGTGGGCTTCAGAGAGGAGGCGATGACCCCATA +
Preference number: 1 (lower is better)
Translates to: LWPGGKGSALGAAWG*ERTRGLQRGGDDPI
Trigger: TATGGGGTCATCGCCTCCTCTCTGAAGCCCACGGGTCCTCTCCCAGCCCCAGGCTGCACCCAGTGCAGAACCTTTGCCTCCTGGCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp CATGACAGGAGGGCCAGGAGGCCTCTGGGAGGCGAAGGCTTGGTCTaGTGTGGGTCCCACCATCGGGCACTGCTGGAATCAGCCTGCAGA +
Preference number: 1 (lower is better)
Translates to: HDRRARRPLGGEGLV*CGSHHRALLESACR
Trigger: TCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGACCCACACCAGACCAAGCCTTCGCCTCCCAGAGGCCTCCTGGCCCTCCTGTCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp CTCCCCGGGAGGCTTCTGTGGCCAGGGTTCCCATGGCGGGTCTGGTaGCAACAGCTTGGAGAAAAGCCTCCCGGGACCAACCCTCATTCC +
Preference number: 1 (lower is better)
Translates to: LPGRLLWPGFPWRVW*QQLGEKPPGTNPHS
Trigger: GGAATGAGGGTTGGTCCCGGGAGGCTTTTCTCCAAGCTGTTGCCACCAGACCCGCCATGGGAACCCTGGCCACAGAAGCCTCCCGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 90 bp TGGGAGGCGAAGGCTTGGTCTGGTGTGGGTCCCACCATCGGGCACTaGTGGAATCAGCCTGCAGAAGGGTCCCTCTGGCCAGGAGGCAAA +
Preference number: 1 (lower is better)
Translates to: WEAKAWSGVGPTIGH*WNQPAEGSLWPGGK
Trigger: TTTGCCTCCTGGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGACCCACACCAGACCAAGCCTTCGCCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp GAGGCGAAGGCTTGGTCTGGTGTGGGTCCCACCATCGGGCACTGCTaGAATCAGCCTGCAGAAGGGTCCCTCTGGCCAGGAGGCAAAGGT +
Preference number: 1 (lower is better)
Translates to: EAKAWSGVGPTIGHC*NQPAEGSLWPGGKG
Trigger: ACCTTTGCCTCCTGGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGACCCACACCAGACCAAGCCTTCGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp GGCAACCCTTGTGTGTTTGCAGCGCAAGAGGAGCTCAGCCCGTCCTaGCTGCCGTCCTGGGTCGAAGCAGCAAGTGTCTTCCCGCCCTGT +
Preference number: 1 (lower is better)
Translates to: GNPCVFAAQEELSPS*LPSWVEAASVFPPC
Trigger: ACAGGGCGGGAAGACACTTGCTGCTTCGACCCAGGACGGCAGCCAGGACGGGCTGAGCTCCTCTTGCGCTGCAAACACACAAGGGTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp TCACTCCCCGGGAGGCTTCTGTGGCCAGGGTTCCCATGGCGGGTCTaGTGGCAACAGCTTGGAGAAAAGCCTCCCGGGACCAACCCTCAT +
Preference number: 1 (lower is better)
Translates to: SLPGRLLWPGFPWRV*WQQLGEKPPGTNPH
Trigger: ATGAGGGTTGGTCCCGGGAGGCTTTTCTCCAAGCTGTTGCCACCAGACCCGCCATGGGAACCCTGGCCACAGAAGCCTCCCGGGGAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 90 bp CACACGTGCACGCAGGCACACGCACGCAGGCACGGGGACAAGTGCTaGCCACGCTCCTCCAGCAGGCAGCATATGGTCTGCTGCTTAACA +
Preference number: 1 (lower is better)
Translates to: HTCTQAHARRHGDKC*PRSSSRQHMVCCLT
Trigger: TGTTAAGCAGCAGACCATATGCTGCCTGCTGGAGGAGCGTGGTCAGCACTTGTCCCCGTGCCTGCGTGCGTGTGCCTGCGTGCACGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 90 bp TTGGTCTGGTGTGGGTCCCACCATCGGGCACTGCTGGAATCAGCCTaGAGAAGGGTCCCTCTGGCCAGGAGGCAAAGGTTCTGCACTGGG +
Preference number: 1 (lower is better)
Translates to: LVWCGSHHRALLESA*RRVPLARRQRFCTG
Trigger: CCCAGTGCAGAACCTTTGCCTCCTGGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGACCCACACCAGACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 90 bp GGCCCAGAAAGGCAGCTTTGCTCTGGGTCATCAGGCTCAAGTGCCTaGTCTGGGCCACCTTCGGAAGCCTGGTGGAGCCGAGTGTTGCCT +
Preference number: 1 (lower is better)
Translates to: GPERQLCSGSSGSSA*SGPPSEAWWSRVLP
Trigger: AGGCAACACTCGGCTCCACCAGGCTTCCGAAGGTGGCCCAGAGCAGGCACTTGAGCCTGATGACCCAGAGCAAAGCTGCCTTTCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp GGGAGGGGGAGGAGGCCTCTCTCGTTAGAAACGGGCCCTGCTGGTTaGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCCAACC +
Preference number: 1 (lower is better)
Translates to: GRGRRPLSLETGPAG*AEKSQERLQPAVPT
Trigger: GGTTGGGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGCCCGTTTCTAACGAGAGAGGCCTCCTCCCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR CCA 90 bp TGCTGTCTCTGGGCAGTCTCACGTGGACAGACAATGCTCAGAAGGTaGCGAAGGGGCTGGAGGGAGATACCACCGACGGCTGCAGGGGAG +
Preference number: 1 (lower is better)
Translates to: CCLWAVSRGQTMLRR*RRGWREIPPTAAGE
Trigger: CTCCCCTGCAGCCGTCGGTGGTATCTCCCTCCAGCCCCTTCGCCACCTTCTGAGCATTGTCTGTCCACGTGAGACTGCCCAGAGACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 90 bp GGGGAGGAGGCCTCTCTCGTTAGAAACGGGCCCTGCTGGTTGGGCTaGAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCCAACCTCAGG +
Preference number: 1 (lower is better)
Translates to: GEEASLVRNGPCWLG*KVTGEAPTSSPNLR
Trigger: CCTGAGGTTGGGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGCCCGTTTCTAACGAGAGAGGCCTCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR TCA 90 bp GTAGTTTGCTACAGTGAACACCAATGTCAGGAGCAGGCATCACCGTaGGACGCCACGGGGGCAGGTCAGCGGGACGGGGACAGGGAGGTT +
Preference number: 1 (lower is better)
Translates to: VVCYSEHQCQEQASP*DATGAGQRDGDREV
Trigger: AACCTCCCTGTCCCCGTCCCGCTGACCTGCCCCCGTGGCGTCTCACGGTGATGCCTGCTCCTGACATTGGTGTTCACTGTAGCAAACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp GAGCGCCTGGAGGTGGAGGACGGCAGAAGCGGCCACCGTGGCACATaGGGTGAGGACTCAGATGCCAGGAGGATGTCCTCATTTTTGGAA +
Preference number: 1 (lower is better)
Translates to: ERLEVEDGRSGHRGT*GEDSDARRMSSFLE
Trigger: TTCCAAAAATGAGGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCTGCCGTCCTCCACCTCCAGGCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 90 bp TCAAGGCCCAGAAAGGCAGCTTTGCTCTGGGTCATCAGGCTCAAGTaGCTGCTCTGGGCCACCTTCGGAAGCCTGGTGGAGCCGAGTGTT +
Preference number: 1 (lower is better)
Translates to: SRPRKAALLWVIRLK*LLWATFGSLVEPSV
Trigger: AACACTCGGCTCCACCAGGCTTCCGAAGGTGGCCCAGAGCAGGCACTTGAGCCTGATGACCCAGAGCAAAGCTGCCTTTCTGGGCCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 90 bp CCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTaGAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCA +
Preference number: 1 (lower is better)
Translates to: PWDTQSFTVGPCSSC*RLPFLKVGGQAASS
Trigger: TGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
3UTR GCA 90 bp AGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTaGTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCT +
Preference number: 1 (lower is better)
Translates to: RPWDTQSFTVGPCSS*CRLPFLKVGGQAAS
Trigger: AGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
3UTR TCA 90 bp AAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGTCACACTTaGCCATGCAAGGGGACACTCAGATACACGGTGACCAGCCCGGCC +
Preference number: 1 (lower is better)
Translates to: KSAATKLAGPSPCHT*PCKGTLRYTVTSPA
Trigger: GGCCGGGCTGGTCACCGTGTATCTGAGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR GCA 90 bp AGCAGCGCTCTGCCCACGTCCACAGGAAGTGGCCGACGTCTCCTCTaGCTTTGGTTTAGTGGCCCCACACTTCATCACCTCACTTTGTCC +
Preference number: 1 (lower is better)
Translates to: SSALPTSTGSGRRLL*LWFSGPTLHHLTLS
Trigger: GGACAAAGTGAGGTGATGAAGTGTGGGGCCACTAAACCAAAGGCAGAGGAGACGTCGGCCACTTCCTGTGGACGTGGGCAGAGCGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 90 bp CCTGGAGGTGGAGGACGGCAGAAGCGGCCACCGTGGCACATGGGGTaGGGACTCAGATGCCAGGAGGATGTCCTCATTTTTGGAATAACT +
Preference number: 1 (lower is better)
Translates to: PGGGGRQKRPPWHMG*GLRCQEDVLIFGIT
Trigger: AGTTATTCCAAAAATGAGGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCTGCCGTCCTCCACCTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 90 bp AGAGCAAGAAGTGGTCAGTCCCAGGAGGCACCACACCACCCGATCTaGTCGCCGCGCCTGGTGGTCTCCAGGTGCCATTTTAAAGCTCTA +
Preference number: 1 (lower is better)
Translates to: RARSGQSQEAPHHPI*SPRLVVSRCHFKAL
Trigger: TAGAGCTTTAAAATGGCACCTGGAGACCACCAGGCGCGGCGATCAGATCGGGTGGTGTGGTGCCTCCTGGGACTGACCACTTCTTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp CCCTTAAAACCACGTGGAGCTCTGCTGTCTCTGGGCAGTCTCACGTaGACAGACAATGCTCAGAAGGTGGCGAAGGGGCTGGAGGGAGAT +
Preference number: 1 (lower is better)
Translates to: PLKPRGALLSLGSLT*TDNAQKVAKGLEGD
Trigger: ATCTCCCTCCAGCCCCTTCGCCACCTTCTGAGCATTGTCTGTCCACGTGAGACTGCCCAGAGACAGCAGAGCTCCACGTGGTTTTAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 90 bp CCTCCAACCCCACAGTCTCTCCCTCACATACACACACGGAAGACGTaGCTCACACACACATGCACACACAGGGCACAGGTACACGAAGGC +
Preference number: 1 (lower is better)
Translates to: PPTPQSLPHIHTRKT*LTHTCTHRAQVHEG
Trigger: GCCTTCGTGTACCTGTGCCCTGTGTGTGCATGTGTGTGTGAGTCACGTCTTCCGTGTGTGTATGTGAGGGAGAGACTGTGGGGTTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 90 bp AGGTCAGCGGGACGGGGACAGGGAGGTTGGTCATCGAAAGGCAGGTaGTGCATGTCGTGTCATTTAGCACCTGGTCATGAGATACGGCGA +
Preference number: 1 (lower is better)
Translates to: RSAGRGQGGWSSKGR*CMSCHLAPGHEIRR
Trigger: TCGCCGTATCTCATGACCAGGTGCTAAATGACACGACATGCATCACCTGCCTTTCGATGACCAACCTCCCTGTCCCCGTCCCGCTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp AACAGGACACCCAGGCGCGATCGTACACACGCTAGGATGCATTCCTaGAGCAGACGCAATTCTCTAGCCCGAGTGGGGAATGTTCTGGAG +
Preference number: 1 (lower is better)
Translates to: NRTPRRDRTHARMHS*SRRNSLARVGNVLE
Trigger: CTCCAGAACATTCCCCACTCGGGCTAGAGAATTGCGTCTGCTCCAGGAATGCATCCTAGCGTGTGTACGATCGCGCCTGGGTGTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp TGTGTCCTAATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTaGCAGGCCCTTCCCCATGTCACACTTGACCATGCAAGGGGACAC +
Preference number: 1 (lower is better)
Translates to: CVLMGWRVPSLQPLN*QALPHVTLDHARGH
Trigger: GTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATTAGGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR CCA 90 bp AAAAGCCCCAGAGACATGAGTGGGCTCAAGTGTGTCCTAATGGGATaGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCC +
Preference number: 1 (lower is better)
Translates to: KSPRDMSGLKCVLMG*RVPSLQPLNWQALP
Trigger: GGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATTAGGACACACTTGAGCCCACTCATGTCTCTGGGGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR CCA 90 bp GCTCTGCCCACGTCCACAGGAAGTGGCCGACGTCTCCTCTGCCTTTaGTTTAGTGGCCCCACACTTCATCACCTCACTTTGTCCATGAAT +
Preference number: 1 (lower is better)
Translates to: ALPTSTGSGRRLLCL*FSGPTLHHLTLSMN
Trigger: ATTCATGGACAAAGTGAGGTGATGAAGTGTGGGGCCACTAAACCAAAGGCAGAGGAGACGTCGGCCACTTCCTGTGGACGTGGGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 90 bp ATCGAAAGGCAGGTGATGCATGTCGTGTCATTTAGCACCTGGTCATaGGATACGGCGAGACCCCCAGGTCCAGGGAAAGGTCTCCCCTTA +
Preference number: 1 (lower is better)
Translates to: IERQVMHVVSFSTWS*DTARPPGPGKGLPL
Trigger: TAAGGGGAGACCTTTCCCTGGACCTGGGGGTCTCGCCGTATCTCATGACCAGGTGCTAAATGACACGACATGCATCACCTGCCTTTCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp CAAAGGAGCTTTAGAGAGCAGAGGAGCCCGAGTCACTGCCACCACTaGGTTCCTCAGTGTCTGTGGGGTTTGTGTTCATCATGCCCAGTA +
Preference number: 1 (lower is better)
Translates to: QRSFREQRSPSHCHH*VPQCLWGLCSSCPV
Trigger: TACTGGGCATGATGAACACAAACCCCACAGACACTGAGGAACCCAGTGGTGGCAGTGACTCGGGCTCCTCTGCTCTCTAAAGCTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 90 bp TCCTCCAGCAGGCAGCATATGGTCTGCTGCTTAACAGCCGAGCTCTaGCAATTGGGGACCATTAGGGTGGGTTCTTTTCCCAGCATCAAA +
Preference number: 1 (lower is better)
Translates to: SSSRQHMVCCLTAEL*QLGTIRVGSFPSIK
Trigger: TTTGATGCTGGGAAAAGAACCCACCCTAATGGTCCCCAATTGGCAGAGCTCGGCTGTTAAGCAGCAGACCATATGCTGCCTGCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 90 bp CATGTTTCTCAAAGGAGCTTTAGAGAGCAGAGGAGCCCGAGTCACTaGCACCACTGGGTTCCTCAGTGTCTGTGGGGTTTGTGTTCATCA +
Preference number: 1 (lower is better)
Translates to: HVSQRSFREQRSPSH*HHWVPQCLWGLCSS
Trigger: TGATGAACACAAACCCCACAGACACTGAGGAACCCAGTGGTGGCAGTGACTCGGGCTCCTCTGCTCTCTAAAGCTCCTTTGAGAAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 90 bp CAGAGGAGCCCGAGTCACTGCCACCACTGGGTTCCTCAGTGTCTGTaGGGTTTGTGTTCATCATGCCCAGTAGATCTAGAAACTTCTTTT +
Preference number: 1 (lower is better)
Translates to: QRSPSHCHHWVPQCL*GLCSSCPVDLETSF
Trigger: AAAAGAAGTTTCTAGATCTACTGGGCATGATGAACACAAACCCCACAGACACTGAGGAACCCAGTGGTGGCAGTGACTCGGGCTCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 90 bp ACACATGTACATGAAAATTCCCATCCAGAATGTAGTTTGCTACAGTaGACACCAATGTCAGGAGCAGGCATCACCGTGAGACGCCACGGG +
Preference number: 1 (lower is better)
Translates to: THVHENSHPECSLLQ*TPMSGAGITVRRHG
Trigger: CCCGTGGCGTCTCACGGTGATGCCTGCTCCTGACATTGGTGTTCACTGTAGCAAACTACATTCTGGATGGGAATTTTCATGTACATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 90 bp GCCTTTGGTTTAGTGGCCCCACACTTCATCACCTCACTTTGTCCATaGATTTCACACGTTTTCTTACAAGAGCTCTGTAATGCGCCAGGC +
Preference number: 1 (lower is better)
Translates to: AFGLVAPHFITSLCP*ISHVFLQELCNAPG
Trigger: GCCTGGCGCATTACAGAGCTCTTGTAAGAAAACGTGTGAAATTCATGGACAAAGTGAGGTGATGAAGTGTGGGGCCACTAAACCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CAA 90 bp CCCGAGAAGGGGCTGGGACAGGACTGCACGCCCACACGCACTTTCTaGCCAAAGCCGCGCGGCACTGCGTGCATGGCCGGCTGGGCGGGC +
Preference number: 2 (lower is better)
Translates to: PEKGLGQDCTPTRTF*PKPRGTACMAGWAG
Trigger: GCCCGCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR-3UTR TCA 90 bp GGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGCCCGTGGCTTCTCGAGGTGACTaGGACCGATGGGCGGCGGCT +
Preference number: 2 (lower is better)
Translates to: GTRFPVGSGRGFGPSRPVASRGD*DRWAAA
Trigger: AGCCGCCGCCCATCGGTCTCAGTCACCTCGAGAAGC...CACGGGCCTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR-3UTR TCA 90 bp GCTGCCACAGCGCTGCCTGCTGGGGGATCAAGGTCCCCGCATCCAGGCCTCCAGCAGGGGCAGGGCCGGTaGTTGGAGGCCTGGGGATGG +
Preference number: 2 (lower is better)
Translates to: AATALPAGGSRSPHPGLQQGQGR*LEAWGW
Trigger: CCATCCCCAGGCCTCCAATCACCGGCCCTGCCCCTG...CTGGAGGCCTGGATGCGGGGACCTTGATCCCCCAGCAGGCAGCGCTGTGGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CCA 90 bp GAAGGCGGGCTGGACAAGGGGCCCTTCACCAAGAGCGGCCAGGGCGGCGGTCCACTTCCCGGTCGGAAGTaGCAGGGGGTTCGGGCCCTC +
Preference number: 2 (lower is better)
Translates to: EGGLDKGPFTKSGQGGGPLPGRK*QGVRAL
Trigger: GAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAG...TGGACCGCCGCCCTGGCCGCTCTTGGTGAAGGGCCCCTTGTCCAGCCCGCCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR TCA 90 bp AGCCCGGCCGACTGGACTTCAGGGGGACAGCATGTGGCCGCCCATCCACGGGGCGCTTCTCGAGGTGACTaGGACCGATGGGCGGCGGCT +
Preference number: 2 (lower is better)
Translates to: SPADWTSGGQHVAAHPRGASRGD*DRWAAA
Trigger: AGCCGCCGCCCATCGGTCTCAGTCACCTCGAGAAGC...GCCCCGTGGATGGGCGGCCACATGCTGTCCCCCTGAAGTCCAGTCGGCCGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR-3UTR TCA 90 bp GCTGCCACAGCGCTGCCTGCTGGGGGATCAAGGTCCCCGCATCCAGGCCTCCAGGACCCAGGGTGTGGTTaGGGGAGGGCGCTGCTGAGC +
Preference number: 2 (lower is better)
Translates to: AATALPAGGSRSPHPGLQDPGCG*GRALLS
Trigger: GCTCAGCAGCGCCCTCCCTCAACCACACCCTGGGTC...CTGGAGGCCTGGATGCGGGGACCTTGATCCCCCAGCAGGCAGCGCTGTGGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR TCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGGAGGCTCTCACAGGCCATaGCAGGAGGGCCAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: SIPAGALLAPPRPEHWSGGSHRP*QEGQEA
Trigger: GGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCC...TCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR TCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGGACCACACCACCCGATCTaGTCGCCGCGCCTGGTGGTC +
Preference number: 2 (lower is better)
Translates to: SIPAGALLAPPRPEHWSGPHHPI*SPRLVV
Trigger: GACCACCAGGCGCGGCGATCAGATCGGGTGGTGTGG...TCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR TCA 90 bp CTCAGAAGGTGGCGAAGGGGCTGGAGGGAGATACCACCGACGGCTGCAGGGGAGCCGAGTGTTGCCTGGTaGCGTGGAGCAGGAGGCGGG +
Preference number: 2 (lower is better)
Translates to: LRRWRRGWREIPPTAAGEPSVAW*RGAGGG
Trigger: CCCGCCTCCTGCTCCACGTCACCAGGCAACACTCGG...CTCCCCTGCAGCCGTCGGTGGTATCTCCCTCCAGCCCCTTCGCCACCTTCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CAA 90 bp CTGGTCTGGAGCTTCATTGGCCGGCAGGGGCCCAGCCCTCAGCTGTaGGAGCCCTACGGCTCTAGGTCTGGCCCCTCCACAAGCCCTCCA +
Preference number: 2 (lower is better)
Translates to: LVWSFIGRQGPSPQL*EPYGSRSGPSTSPP
Trigger: TGGAGGGCTTGTGGAGGGGCCAGACCTAGAGCCGTAGGGCTCCAACAGCTGAGGGCTGGGCCCCTGCCGGCCAATGAAGCTCCAGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR TCA 90 bp CTCCAGGCCCGTGGACAGGGCCCCCAGGGATTGCGGCTCAGTATACAAACCCCCTGCAGCTTCTCGAGGTaGCTGAGACCGATGGGCGGC +
Preference number: 2 (lower is better)
Translates to: LQARGQGPQGLRLSIQTPCSFSR*LRPMGG
Trigger: GCCGCCCATCGGTCTCAGTCACCTCGAGAAGCTGCA...GGGGGTTTGTATACTGAGCCGCAATCCCTGGGGGCCCTGTCCACGGGCCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR-3UTR GCA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGAGGGCCCCCAGGGATTaGGGCTCAGTATACAAACCC +
Preference number: 2 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQRAPRD*GSVYKP
Trigger: GGGTTTGTATACTGAGCCGCAATCCCTGGGGGCCCT...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR-3UTR CCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGGAGGCAGGGCCGGTGATTaGAGGCCTGGGGATGGTGTA +
Preference number: 2 (lower is better)
Translates to: SIPAGALLAPPRPEHWSGGRAGD*RPGDGV
Trigger: TACACCATCCCCAGGCCTCCAATCACCGGCCCTGCC...TCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGGAGGCGAAGGCTTGGTCTaGTGTGGGTCCCACCATCGG +
Preference number: 2 (lower is better)
Translates to: SIPAGALLAPPRPEHWSGGEGLV*CGSHHR
Trigger: CCGATGGTGGGACCCACACCAGACCAAGCCTTCGCC...TCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR GCA 90 bp GCTGCCACAGCGCTGCCTGCTGGGGGATCAAGGTCCCCGCATCCAGGCCTCCAGGCATGCAGGCACATGTaGACACACAGGGCACAGGTA +
Preference number: 2 (lower is better)
Translates to: AATALPAGGSRSPHPGLQACRHM*THRAQV
Trigger: TACCTGTGCCCTGTGTGTGCACATGTGCCTGCATGC...CTGGAGGCCTGGATGCGGGGACCTTGATCCCCCAGCAGGCAGCGCTGTGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CCA 90 bp GCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCCAACAGGGGGACAGCATGTaGCCGCCCATCCACGGGGCC +
Preference number: 2 (lower is better)
Translates to: ALLVGLKSHRRGSNQQSQQGDSM*PPIHGA
Trigger: GGCCCCGTGGATGGGCGGCCACATGCTGTCCCCCTG...TTGGGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR-3UTR CCA 90 bp GACCTTCCCAGGGAAGGGCAGGTTCTTCAGCAGAGACCAGAACACGGAGGAGGGGGCCCGAGAAGGGGCTaGGACAGGACTGCACGCCCA +
Preference number: 2 (lower is better)
Translates to: DLPREGQVLQQRPEHGGGGPRRG*DRTARP
Trigger: TGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCC...CCCTCCTCCGTGTTCTGGTCTCTGCTGAAGAACCTGCCCTTCCCTGGGAAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR-3UTR TCA 90 bp AGAAGCGGCCACCGTGGCACATGGGGTGAGGACTCAGATGCCAGGAGGATGTCCGAGCAACAGTCCCCATaGGAGAGCCGTGGAGACGCC +
Preference number: 2 (lower is better)
Translates to: RSGHRGTWGEDSDARRMSEQQSP*ESRGDA
Trigger: GGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTC...GGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR GCA 90 bp ATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGCAGGTAAAGCCGCGCGGCACTaGGTGCATGGCCGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: MCIDFPRNAHGPSQGRAGKAARH*VHGRLG
Trigger: GCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTT...ACCTGCCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR CAA 90 bp CGTGAGACGCCACGGGGGCAGGTCAGCGGGACGGGGACAGGGAGGTaGGTCATCGAAAGGCAGGTGATGCATGTCGTGTCATTTAGCACC +
Preference number: 2 (lower is better)
Translates to: RETPRGQVSGTGTGR*VIERQVMHVVSFST
Trigger: GGTGCTAAATGACACGACATGCATCACCTGCCTTTCGATGACCAACCTCCCTGTCCCCGTCCCGCTGACCTGCCCCCGTGGCGTCTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR TCA 90 bp CCCAGATCCACCTGTGCCAGTGAGCAGAGGCGCCAGGGTGGGGTCAAGACTGCCAAAGCCCCAGAGACATaGGTGGGCTCAAGTGTGTCC +
Preference number: 2 (lower is better)
Translates to: PRSTCASEQRRQGGVKTAKAPET*VGSSVS
Trigger: GGACACACTTGAGCCCACTCATGTCTCTGGGGCTTT...GGCAGTCTTGACCCCACCCTGGCGCCTCTGCTCACTGGCACAGGTGGATCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR TCA 90 bp CCCAGATCCACCTGTGCCAGTGAGCAGAGGCGCCAGGGTGGGGTCAAGACTGCCAGAGCAAGGAGCTGCTaGAAACCATCCCCACTCAGG +
Preference number: 2 (lower is better)
Translates to: PRSTCASEQRRQGGVKTARARSC*KPSPLR
Trigger: CCTGAGTGGGGATGGTTTTCAGCAGCTCCTTGCTCT...GGCAGTCTTGACCCCACCCTGGCGCCTCTGCTCACTGGCACAGGTGGATCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR TCA 90 bp ATGTCGTGTCATTTAGCACCTGGTCATGAGATACGGCGAGACCCCCAGGTCCAGGAGACACAGGCCCCCTaGGGGTCCGGGAACCTCCCA +
Preference number: 2 (lower is better)
Translates to: MSCHLAPGHEIRRDPQVQETQAP*GSGNLP
Trigger: TGGGAGGTTCCCGGACCCTCAGGGGGCCTGTGTCTC...CTGGACCTGGGGGTCTCGCCGTATCTCATGACCAGGTGCTAAATGACACGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR GCA 90 bp GGGCCTAGGGGTGTGGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTGTTCAAACGATTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: GPRGVALTGHDRRARRPLFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAATCGTTTGAA...CAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCCTAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR GCA 90 bp ATGTCGTGTCATTTAGCACCTGGTCATGAGATACGGCGAGACCCCCAGGTCCAGGCTGGTCCTGCGGCCTaGAGACTAGGAGACGGGGCC +
Preference number: 2 (lower is better)
Translates to: MSCHLAPGHEIRRDPQVQAGPAA*RLGDGA
Trigger: GGCCCCGTCTCCTAGTCTGCAGGCCGCAGGACCAGC...CTGGACCTGGGGGTCTCGCCGTATCTCATGACCAGGTGCTAAATGACACGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR GCA 90 bp ATGTCGTGTCATTTAGCACCTGGTCATGAGATACGGCGAGACCCCCAGGTCCAGAGAGCCCGCCCCCTCTaGTGCAGAAGGAAGCGGCCC +
Preference number: 2 (lower is better)
Translates to: MSCHLAPGHEIRRDPQVQRARPL*CRRKRP
Trigger: GGGCCGCTTCCTTCTGCAGCAGAGGGGGCGGGCTCT...CTGGACCTGGGGGTCTCGCCGTATCTCATGACCAGGTGCTAAATGACACGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CCA 90 bp ATGTCGTGTCATTTAGCACCTGGTCATGAGATACGGCGAGACCCCCAGGTCCAGCCCATGAGAGAGCCGTaGAGACGCCGGGAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: MSCHLAPGHEIRRDPQVQPMREP*RRREPQ
Trigger: CTGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGG...CTGGACCTGGGGGTCTCGCCGTATCTCATGACCAGGTGCTAAATGACACGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CCA 90 bp AGACACATCAGCACAGCGGTCCAGGCTCTGGCTCACTCCCCGGGAGGCTTCTGTGATCGCCGCGCCTGGTaGTCTCCAGGTGCCATTTTA +
Preference number: 2 (lower is better)
Translates to: RHISTAVQALAHSPGGFCDRRAW*SPGAIL
Trigger: TAAAATGGCACCTGGAGACCACCAGGCGCGGCGATC...ACAGAAGCCTCCCGGGGAGTGAGCCAGAGCCTGGACCGCTGTGCTGATGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CAA 90 bp GGTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTaGTTCCAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACA +
Preference number: 2 (lower is better)
Translates to: GDRKTLGHTELYGGA*FQLLQAAIPEGRGT
Trigger: TGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
3UTR-3UTR TCA 90 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATCACTCAGATACACGGTaGCCAGCCCGGCCGACTGGA +
Preference number: 2 (lower is better)
Translates to: MGWRVPSLQPLNWQALPHHSDTR*PARPTG
Trigger: TCCAGTCGGCCGGGCTGGTCACCGTGTATCTGAGTG...ATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR-3UTR CCA 90 bp AATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATCCACGGGGCCCCGGTaGCAGGTGACCACAAACACA +
Preference number: 2 (lower is better)
Translates to: NGMESPKSAATKLAGPSPSTGPR*QVTTNT
Trigger: TGTGTTTGTGGTCACCTGCCACCGGGGCCCCGTGGA...TGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR-3UTR CCA 90 bp GTCCCACCATCGGGCACTGCTGGAATCAGCCTGCAGAAGGGTCCCTCTGGCCAGAAAGTCAGGGTGAAGTaGGAGGAGACCTCAAACCCC +
Preference number: 2 (lower is better)
Translates to: VPPSGTAGISLQKGPSGQKVRVK*EETSNP
Trigger: GGGGTTTGAGGTCTCCTCCCACTTCACCCTGACTTT...CTGGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CCA 90 bp AGCCACTGCGCCCGGCCAGATCTAGAAACTTCTAACTTGAATCCCACACCCCCAGGGCCAGGAGGCCTCTaGGAGGCGAAGGCTTGGTCT +
Preference number: 2 (lower is better)
Translates to: SHCARPDLETSNLNPTPPGPGGL*EAKAWS
Trigger: AGACCAAGCCTTCGCCTCCCAGAGGCCTCCTGGCCC...TGGGGGTGTGGGATTCAAGTTAGAAGTTTCTAGATCTGGCCGGGCGCAGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR TCA 90 bp CCCTTCCCCATGTCACACTTGACCATGCAAGGGGACACTCAGATACACGGTGACGAGCAACAGTCCCCATaGGAGAGCCGTGGAGACGCC +
Preference number: 2 (lower is better)
Translates to: PFPMSHLTMQGDTQIHGDEQQSP*ESRGDA
Trigger: GGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTC...GTCACCGTGTATCTGAGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR-3UTR GCA 90 bp GCTGCCACAGCGCTGCCTGCTGGGGGATCAAGGTCCCCGCATCCAGGCCTCCAGATGGGGTCATGTGATTaGTACTCCAGCCTTAAGAAT +
Preference number: 2 (lower is better)
Translates to: AATALPAGGSRSPHPGLQMGSCD*YSSLKN
Trigger: ATTCTTAAGGCTGGAGTAGCAATCACATGACCCCAT...CTGGAGGCCTGGATGCGGGGACCTTGATCCCCCAGCAGGCAGCGCTGTGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR GCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTGGTCGGGGGACAAGCTaGCTCTTCAACCCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLGRGTS*LFNPSS
Trigger: AGAGCTGGGGTTGAAGAGGCAGCTTGTCCCCCGACC...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000415009.5
3UTR-3UTR CCA 90 bp AGACACATCAGCACAGCGGTCCAGGCTCTGGCTCACTCCCCGGGAGGCTTCTGTCGTCTCCTCTGCCTTTaGTTTAGTGGCCCCACACTT +
Preference number: 2 (lower is better)
Translates to: RHISTAVQALAHSPGGFCRLLCL*FSGPTL
Trigger: AAGTGTGGGGCCACTAAACCAAAGGCAGAGGAGACG...ACAGAAGCCTCCCGGGGAGTGAGCCAGAGCCTGGACCGCTGTGCTGATGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR GCA 90 bp ATGTCGTGTCATTTAGCACCTGGTCATGAGATACGGCGAGACCCCCAGGTCCAGCTGCTGGAATCAGCCTaGAGAAGGGTCCCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: MSCHLAPGHEIRRDPQVQLLESA*RRVPLA
Trigger: GGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAG...CTGGACCTGGGGGTCTCGCCGTATCTCATGACCAGGTGCTAAATGACACGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CCA 90 bp AGAAGCGGCCACCGTGGCACATGGGGTGAGGACTCAGATGCCAGGAGGATGTCCCCCCAGAGACATGAGTaGGCTCAAGTGTGTCCTAAT +
Preference number: 2 (lower is better)
Translates to: RSGHRGTWGEDSDARRMSPQRHE*AQVCPN
Trigger: ATTAGGACACACTTGAGCCCACTCATGTCTCTGGGG...GGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CCA 90 bp AGCCACTGCGCCCGGCCAGATCTAGAAACTTCTAACTTGAATCCCACACCCCCAAGCTCTAGGAGCGCCTaGAGGTGGAGGACGGCAGAA +
Preference number: 2 (lower is better)
Translates to: SHCARPDLETSNLNPTPPSSRSA*RWRTAE
Trigger: TTCTGCCGTCCTCCACCTCCAGGCGCTCCTAGAGCT...TGGGGGTGTGGGATTCAAGTTAGAAGTTTCTAGATCTGGCCGGGCGCAGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CCA 90 bp AGCCACTGCGCCCGGCCAGATCTAGAAACTTCTAACTTGAATCCCACACCCCCACCTGGACAAGGAGCTTaGCCCCCAGAGCAAGGAGCT +
Preference number: 2 (lower is better)
Translates to: SHCARPDLETSNLNPTPPPGQGA*PPEQGA
Trigger: AGCTCCTTGCTCTGGGGGCCAAGCTCCTTGTCCAGG...TGGGGGTGTGGGATTCAAGTTAGAAGTTTCTAGATCTGGCCGGGCGCAGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CCA 90 bp GCAGTCCCAACCTCAGGGGACCTCTCTGGGGCCACAGGCATCATCTGGCTAGAATGTGTCCTAATGGGATaGAGAGTCCCAAGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: AVPTSGDLSGATGIIWLECVLMG*RVPSLQ
Trigger: CTGCAGACTTGGGACTCTCCATCCCATTAGGACACA...TTCTAGCCAGATGATGCCTGTGGCCCCAGAGAGGTCCCCTGAGGTTGGGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR-3UTR CCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTACTGGCTGGACACGGTaGCTTACAACTGCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLTGWTR*LTTAVP
Trigger: TGGGACTGCAGTTGTAAGCCACCGTGTCCAGCCAGT...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
3UTR-3UTR GCA 90 bp GCCAAGTGTTCTGACAGGCGGTTTTCCCGTAAACCGACCCCTTCAGCGTTTCTGTGCTTTCCAAGGCACTaGACCCCAGCCTCAGGAACA +
Preference number: 2 (lower is better)
Translates to: AKCSDRRFSRKPTPSAFLCFPRH*TPASGT
Trigger: TGTTCCTGAGGCTGGGGTGCAGTGCCTTGGAAAGCA...CAGAAACGCTGAAGGGGTCGGTTTACGGGAAAACCGCCTGTCAGAACACTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR GCA 90 bp CCTCAGTGTCTGTGGGGTTTGTGTTCATCATGCCCAGTAGATCTAGAAACTTCTGCCCGCCCCCTCTGCTaGAGAAGGAAGCGGCCCTCA +
Preference number: 2 (lower is better)
Translates to: PQCLWGLCSSCPVDLETSARPLC*RRKRPS
Trigger: TGAGGGCCGCTTCCTTCTGCAGCAGAGGGGGCGGGC...AGAAGTTTCTAGATCTACTGGGCATGATGAACACAAACCCCACAGACACTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR GCA 90 bp GTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCGGGCTGGGACAGGACTaGACGCCCACACGCACTTTC +
Preference number: 2 (lower is better)
Translates to: VSRYSNKAECVSISPGTRGLGQD*TPTRTF
Trigger: GAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCC...GCGCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR-3UTR CCA 90 bp AAGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCCAGGTGGGGCGTGGCTaGCCGGGAGAGAGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: KSFEMGSCDCYSSLKNPFQVGRG*PGERPP
Trigger: AGGGGGCCTCTCTCCCGGCCAGCCACGCCCCACCTG...GAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR CAA 90 bp AGCAGGCAGCATATGGTCTGCTGCTTAACAGCCGAGCTCTGCCAATaGGGGACCATTAGGGTGGGTTCTTTTCCCAGCATCAAATGCTGC +
Preference number: 2 (lower is better)
Translates to: SRQHMVCCLTAELCQ*GTIRVGSFPSIKCC
Trigger: GCAGCATTTGATGCTGGGAAAAGAACCCACCCTAATGGTCCCCAATTGGCAGAGCTCGGCTGTTAAGCAGCAGACCATATGCTGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR TCA 90 bp CCTCAGTGTCTGTGGGGTTTGTGTTCATCATGCCCAGTAGATCTAGAAACTTCTTGCAGCTTCTCGAGGTaGCTGAGACCGATGGGCGGC +
Preference number: 2 (lower is better)
Translates to: PQCLWGLCSSCPVDLETSCSFSR*LRPMGG
Trigger: GCCGCCCATCGGTCTCAGTCACCTCGAGAAGCTGCA...AGAAGTTTCTAGATCTACTGGGCATGATGAACACAAACCCCACAGACACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGGGCTGGGGGCACGCCTaGCCCGAGAAGGGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPGWGHA*PEKGLG
Trigger: TCCCAGCCCCTTCTCGGGCCAGGCGTGCCCCCAGCC...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR-3UTR TCA 90 bp CCTCAGTGTCTGTGGGGTTTGTGTTCATCATGCCCAGTAGATCTAGAAACTTCTCCCTGCTGGTTGGGCTaGAAAGTCACAGGAGAGGCT +
Preference number: 2 (lower is better)
Translates to: PQCLWGLCSSCPVDLETSPCWLG*KVTGEA
Trigger: AGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGG...AGAAGTTTCTAGATCTACTGGGCATGATGAACACAAACCCCACAGACACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR TCA 90 bp CCTCAGTGTCTGTGGGGTTTGTGTTCATCATGCCCAGTAGATCTAGAAACTTCTAGTTCAAGGCCAGCCTaGCCAACATGGTGCAACCCC +
Preference number: 2 (lower is better)
Translates to: PQCLWGLCSSCPVDLETSSSRPA*PTWCNP
Trigger: GGGGTTGCACCATGTTGGTCAGGCTGGCCTTGAACT...AGAAGTTTCTAGATCTACTGGGCATGATGAACACAAACCCCACAGACACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR GCA 90 bp AGCCACTGCGCCCGGCCAGATCTAGAAACTTCTAACTTGAATCCCACACCCCCAAGCAGCGGAAATTCTTaGTCTAAGTCAGAGGATGGT +
Preference number: 2 (lower is better)
Translates to: SHCARPDLETSNLNPTPPSSGNS*SKSEDG
Trigger: ACCATCCTCTGACTTAGAGCAAGAATTTCCGCTGCT...TGGGGGTGTGGGATTCAAGTTAGAAGTTTCTAGATCTGGCCGGGCGCAGTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGGTGACAGGAAGACCCTaGGACACACAGAGCTTTACG +
Preference number: 2 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWVTGRP*DTQSFT
Trigger: CGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
3UTR-3UTR CCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACCCCAGGAACGCGCATaGACCTTCCCAGGGAAGCTG +
Preference number: 2 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEPQERA*TFPGKL
Trigger: CAGCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGG...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR CAA 90 bp AGCCCGAGTCACTGCCACCACTGGGTTCCTCAGTGTCTGTGGGGTTaGTGTTCATCATGCCCAGTAGATCTAGAAACTTCTTTTGTTTTT +
Preference number: 2 (lower is better)
Translates to: SPSHCHHWVPQCLWG*CSSCPVDLETSFVF
Trigger: AAAAACAAAAGAAGTTTCTAGATCTACTGGGCATGATGAACACAAACCCCACAGACACTGAGGAACCCAGTGGTGGCAGTGACTCGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR TCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGGCCCCCTTCCTCTTGTaGCAAACCAAGGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPAPFLL*QTKGPW
Trigger: CCAGGGACCCTTGGTTTGTCACAAGAGGAAGGGGGC...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR-3UTR TCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACCCTGCTGGTTGGGCTaGAAAGTCACAGGAGAGGCT +
Preference number: 2 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEPCWLG*KVTGEA
Trigger: AGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGG...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR CCA 72 bp GCACTTTCTTGCCAAAGCCGCGCGGCACTGCGTGCATaGCCGGCTGGGCGGGCGCGCGGTCGGCGCGCGGCG +
Preference number: 3 (lower is better)
Translates to: ALSCQSRAALRA*PAGRARGRRAA
Trigger: CGCCGCGCGCCGACCGCGCGCCCGCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR GCA 72 bp ACACGCACTTTCTTGCCAAAGCCGCGCGGCACTGCGTaGATGGCCGGCTGGGCGGGCGCGCGGTCGGCGCGC +
Preference number: 3 (lower is better)
Translates to: TRTFLPKPRGTA*MAGWAGARSAR
Trigger: GCGCGCCGACCGCGCGCCCGCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR CCA 72 bp AGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTaGGGCGTGGCTGGCCGGGAGAGAGGCCCCCTTCCT +
Preference number: 3 (lower is better)
Translates to: RAVETPGAPGAR*GVAGRERGPLP
Trigger: AGGAAGGGGGCCTCTCTCCCGGCCAGCCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR GCA 72 bp CTGGGCCACCTTCGGAAGCCTGGTGGAGCCGAGTGTTaGCTGGTGACGTGGAGCAGGAGGCGGGGCGGAGGC +
Preference number: 3 (lower is better)
Translates to: LGHLRKPGGAEC*LVTWSRRRGGG
Trigger: GCCTCCGCCCCGCCTCCTGCTCCACGTCACCAGGCAACACTCGGCTCCACCAGGCTTCCGAAGGTGGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 72 bp GGTCCCCGCATCCAGGCCTCCAGCACCCTCCATCCCTaGAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCA +
Preference number: 3 (lower is better)
Translates to: GPRIQASSTLHP*RSTAGTAKAGA
Trigger: TGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGAGGGTGCTGGAGGCCTGGATGCGGGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp GCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTaGTCTGGAGCTTCATTGGCCGGCAGGGGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: AGALLAPPRPEH*SGASLAGRGPA
Trigger: GGCTGGGCCCCTGCCGGCCAATGAAGCTCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 72 bp CGGCCTGTGGCTCTGGGTCCGGACCCAGGGTGTGGTTaGGGGAGGGCGCTGCTGAGCTGGCAGGCAACCCTT +
Preference number: 3 (lower is better)
Translates to: RPVALGPDPGCG*GRALLSWQATL
Trigger: AAGGGTTGCCTGCCAGCTCAGCAGCGCCCTCCCTCAACCACACCCTGGGTCCGGACCCAGAGCCACAGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 72 bp CTGGCGTCCCAGGCTCCTGCAGCTTCTCGAGGTGACTaGGACCGATGGGCGGCGGCTCCGCCTCTCACCACC +
Preference number: 3 (lower is better)
Translates to: LASQAPAASRGD*DRWAAAPPLTT
Trigger: GGTGGTGAGAGGCGGAGCCGCCGCCCATCGGTCTCAGTCACCTCGAGAAGCTGCAGGAGCCTGGGACGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620087.1
3UTR TCA 72 bp GTCCCTGGCGTCCCAGGCTCCTGCAGCTTCTCGAGGTaGCTGAGACCGATGGGCGGCGGCTCCGCCTCTCAC +
Preference number: 3 (lower is better)
Translates to: VPGVPGSCSFSR*LRPMGGGSASH
Trigger: GTGAGAGGCGGAGCCGCCGCCCATCGGTCTCAGTCACCTCGAGAAGCTGCAGGAGCCTGGGACGCCAGGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620087.1
3UTR GCA 72 bp GGGCACGCCTGGCCCGAGAAGGGGCTGGGACAGGACTaGACGCCCACACGCACTTTCTTGCCAAAGCCGCGC +
Preference number: 3 (lower is better)
Translates to: GHAWPEKGLGQD*TPTRTFLPKPR
Trigger: GCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCCAGGCGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR CCA 72 bp CACTGGCCCAGGGACAGCTCTAGGAGCGCCTGGAGGTaGAGGACGGCAGAAGCGGCCACCGTGGCACATGGG +
Preference number: 3 (lower is better)
Translates to: HWPRDSSRSAWR*RTAEAATVAHG
Trigger: CCCATGTGCCACGGTGGCCGCTTCTGCCGTCCTCCACCTCCAGGCGCTCCTAGAGCTGTCCCTGGGCCAGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp CCAACGGCCTGTGGCTCTGGGTCCGGACCCAGGGTGTaGTTGAGGGAGGGCGCTGCTGAGCTGGCAGGCAAC +
Preference number: 3 (lower is better)
Translates to: PTACGSGSGPRV*LREGAAELAGN
Trigger: GTTGCCTGCCAGCTCAGCAGCGCCCTCCCTCAACCACACCCTGGGTCCGGACCCAGAGCCACAGGCCGTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp AGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTaGAGCTTCATTGGCCGGCAGGGGCCCAGCCCTCAG +
Preference number: 3 (lower is better)
Translates to: STAGTAKAGALV*SFIGRQGPSPQ
Trigger: CTGAGGGCTGGGCCCCTGCCGGCCAATGAAGCTCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 72 bp GCGTGGCTGGCCGGGAGAGAGGCCCCCTTCCTCTTGTaGCAAACCAAGGGTCCCTGGCGTCCCAGGCTCCTG +
Preference number: 3 (lower is better)
Translates to: AWLAGREAPFLL*QTKGPWRPRLL
Trigger: CAGGAGCCTGGGACGCCAGGGACCCTTGGTTTGTCACAAGAGGAAGGGGGCCTCTCTCCCGGCCAGCCACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR GCA 72 bp GGCTGGGACAGGACTGCACGCCCACACGCACTTTCTTaGCAAAGCCGCGCGGCACTGCGTGCATGGCCGGCT +
Preference number: 3 (lower is better)
Translates to: GWDRTARPHALS*QSRAALRAWPA
Trigger: AGCCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR CCA 72 bp ACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTaGCAGGGGGTTCGGGCCCTCCAGGCCCGTGGACAG +
Preference number: 3 (lower is better)
Translates to: TQQPRDTLPGRK*QGVRALQARGQ
Trigger: CTGTCCACGGGCCTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR CCA 72 bp TGCGGCCTGCAGACTAGGAGACGGGGCCTAGGGGTGTaGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGC +
Preference number: 3 (lower is better)
Translates to: CGLQTRRRGLGV*LSQAMTGGPGG
Trigger: GCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCCTAGGCCCCGTCTCCTAGTCTGCAGGCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp CTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTaGGAGGCGAAGGCTTGGTCTGGTGTGGGTCCCACC +
Preference number: 3 (lower is better)
Translates to: LSQAMTGGPGGL*EAKAWSGVGPT
Trigger: GGTGGGACCCACACCAGACCAAGCCTTCGCCTCCCAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp GCGCAAGAGGAGCTCAGCCCGTCCTGGCTGCCGTCCTaGGTCGAAGCAGCAAGTGTCTTCCCGCCCTGTGCA +
Preference number: 3 (lower is better)
Translates to: AQEELSPSWLPS*VEAASVFPPCA
Trigger: TGCACAGGGCGGGAAGACACTTGCTGCTTCGACCCAGGACGGCAGCCAGGACGGGCTGAGCTCCTCTTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp AGGTTCTTCAGCAGAGACCAGAACACGGAGGAGGGCTaGGGGCACGCCTGGCCCGAGAAGGGGCTGGGACAG +
Preference number: 3 (lower is better)
Translates to: RFFSRDQNTEEG*GHAWPEKGLGQ
Trigger: CTGTCCCAGCCCCTTCTCGGGCCAGGCGTGCCCCCAGCCCTCCTCCGTGTTCTGGTCTCTGCTGAAGAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR TCA 72 bp ACGCAGGCACACGCACGCAGGCACGGGGACAAGTGCTaGCCACGCTCCTCCAGCAGGCAGCATATGGTCTGC +
Preference number: 3 (lower is better)
Translates to: TQAHARRHGDKC*PRSSSRQHMVC
Trigger: GCAGACCATATGCTGCCTGCTGGAGGAGCGTGGTCAGCACTTGTCCCCGTGCCTGCGTGCGTGTGCCTGCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 72 bp GTCCGGACCCAGGGTGTGGTTGAGGGAGGGCGCTGCTaGGCTGGCAGGCAACCCTTGTGTGTTTGCAGCGCA +
Preference number: 3 (lower is better)
Translates to: VRTQGVVEGGRC*AGRQPLCVCSA
Trigger: TGCGCTGCAAACACACAAGGGTTGCCTGCCAGCTCAGCAGCGCCCTCCCTCAACCACACCCTGGGTCCGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp GGGACACTCAGATACACGGTGACCAGCCCGGCCGACTaGACTTCAGGGGGACAGCATGTGGCCGCCCATCCA +
Preference number: 3 (lower is better)
Translates to: GTLRYTVTSPAD*TSGGQHVAAHP
Trigger: TGGATGGGCGGCCACATGCTGTCCCCCTGAAGTCCAGTCGGCCGGGCTGGTCACCGTGTATCTGAGTGTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR CCA 72 bp CAGGAGGCCTCTGGGAGGCGAAGGCTTGGTCTGGTGTaGGTCCCACCATCGGGCACTGCTGGAATCAGCCTG +
Preference number: 3 (lower is better)
Translates to: QEASGRRRLGLV*VPPSGTAGISL
Trigger: CAGGCTGATTCCAGCAGTGCCCGATGGTGGGACCCACACCAGACCAAGCCTTCGCCTCCCAGAGGCCTCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp AGGGCCAGGAGGCCTCTGGGAGGCGAAGGCTTGGTCTaGTGTGGGTCCCACCATCGGGCACTGCTGGAATCA +
Preference number: 3 (lower is better)
Translates to: RARRPLGGEGLV*CGSHHRALLES
Trigger: TGATTCCAGCAGTGCCCGATGGTGGGACCCACACCAGACCAAGCCTTCGCCTCCCAGAGGCCTCCTGGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp AGGCCACTCGCCCCTGCCTGGTCGGAGAGCAAGAAGTaGTCAGTCCCAGGAGGCACCACACCACCCGATCTG +
Preference number: 3 (lower is better)
Translates to: RPLAPAWSESKK*SVPGGTTPPDL
Trigger: CAGATCGGGTGGTGTGGTGCCTCCTGGGACTGACCACTTCTTGCTCTCCGACCAGGCAGGGGCGAGTGGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp GGCTCAAGTGCCTGCTCTGGGCCACCTTCGGAAGCCTaGTGGAGCCGAGTGTTGCCTGGTGACGTGGAGCAG +
Preference number: 3 (lower is better)
Translates to: GSSACSGPPSEA*WSRVLPGDVEQ
Trigger: CTGCTCCACGTCACCAGGCAACACTCGGCTCCACCAGGCTTCCGAAGGTGGCCCAGAGCAGGCACTTGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp GGGAGGCTTCTGTGGCCAGGGTTCCCATGGCGGGTCTaGTGGCAACAGCTTGGAGAAAAGCCTCCCGGGACC +
Preference number: 3 (lower is better)
Translates to: GRLLWPGFPWRV*WQQLGEKPPGT
Trigger: GGTCCCGGGAGGCTTTTCTCCAAGCTGTTGCCACCAGACCCGCCATGGGAACCCTGGCCACAGAAGCCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp TCCACCCCAGACACATCAGCACAGCGGTCCAGGCTCTaGCTCACTCCCCGGGAGGCTTCTGTGGCCAGGGTT +
Preference number: 3 (lower is better)
Translates to: STPDTSAQRSRL*LTPREASVARV
Trigger: AACCCTGGCCACAGAAGCCTCCCGGGGAGTGAGCCAGAGCCTGGACCGCTGTGCTGATGTGTCTGGGGTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 72 bp GGAGGAGACCTCAAACCCCAGATCCACCTGTGCCAGTaGGCAGAGGCGCCAGGGTGGGGTCAAGACTGCCAG +
Preference number: 3 (lower is better)
Translates to: GGDLKPQIHLCQ*AEAPGWGQDCQ
Trigger: CTGGCAGTCTTGACCCCACCCTGGCGCCTCTGCTCACTGGCACAGGTGGATCTGGGGTTTGAGGTCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 72 bp CGTGGTCAAGGCTACCAGGAACTGGCAGCAGCGCTCTaGCCACGTCCACAGGAAGTGGCCGACGTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: RGQGYQELAAAL*PRPQEVADVSS
Trigger: AGAGGAGACGTCGGCCACTTCCTGTGGACGTGGGCAGAGCGCTGCTGCCAGTTCCTGGTAGCCTTGACCACG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp GAGGTGGAGGACGGCAGAAGCGGCCACCGTGGCACATaGGGTGAGGACTCAGATGCCAGGAGGATGTCCTCA +
Preference number: 3 (lower is better)
Translates to: EVEDGRSGHRGT*GEDSDARRMSS
Trigger: TGAGGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCTGCCGTCCTCCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp GCTTGGTCTGGTGTGGGTCCCACCATCGGGCACTGCTaGAATCAGCCTGCAGAAGGGTCCCTCTGGCCAGGA +
Preference number: 3 (lower is better)
Translates to: AWSGVGPTIGHC*NQPAEGSLWPG
Trigger: TCCTGGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGACCCACACCAGACCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp TCAAGTGCCTGCTCTGGGCCACCTTCGGAAGCCTGGTaGAGCCGAGTGTTGCCTGGTGACGTGGAGCAGGAG +
Preference number: 3 (lower is better)
Translates to: SSACSGPPSEAW*SRVLPGDVEQE
Trigger: CTCCTGCTCCACGTCACCAGGCAACACTCGGCTCCACCAGGCTTCCGAAGGTGGCCCAGAGCAGGCACTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CAA 90 bp AACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCAGGGCCCCCAGGGATaGCGGCTCAGTATACAAACC +
Preference number: 3 (lower is better)
Translates to: NTTAKGHASRSEVAGGSGQGPQG*RLSIQT
Trigger: GGTTTGTATACTGAGCCGCAATCCCTGGGGGCCCTG...GCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR TCA 72 bp AGTGGTCAGTCCCAGGAGGCACCACACCACCCGATCTaGTCGCCGCGCCTGGTGGTCTCCAGGTGCCATTTT +
Preference number: 3 (lower is better)
Translates to: SGQSQEAPHHPI*SPRLVVSRCHF
Trigger: AAAATGGCACCTGGAGACCACCAGGCGCGGCGATCAGATCGGGTGGTGTGGTGCCTCCTGGGACTGACCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 72 bp TGTGGGTCCCACCATCGGGCACTGCTGGAATCAGCCTaGAGAAGGGTCCCTCTGGCCAGGAGGCAAAGGTTC +
Preference number: 3 (lower is better)
Translates to: CGSHHRALLESA*RRVPLARRQRF
Trigger: GAACCTTTGCCTCCTGGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGACCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 72 bp AAGGCTTGGTCTGGTGTGGGTCCCACCATCGGGCACTaGTGGAATCAGCCTGCAGAAGGGTCCCTCTGGCCA +
Preference number: 3 (lower is better)
Translates to: KAWSGVGPTIGH*WNQPAEGSLWP
Trigger: TGGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGACCCACACCAGACCAAGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 72 bp AGGCAGCTTTGCTCTGGGTCATCAGGCTCAAGTGCCTaGTCTGGGCCACCTTCGGAAGCCTGGTGGAGCCGA +
Preference number: 3 (lower is better)
Translates to: RQLCSGSSGSSA*SGPPSEAWWSR
Trigger: TCGGCTCCACCAGGCTTCCGAAGGTGGCCCAGAGCAGGCACTTGAGCCTGATGACCCAGAGCAAAGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp GCCAGGGTTCCCATGGCGGGTCTGGTGGCAACAGCTTaGAGAAAAGCCTCCCGGGACCAACCCTCATTCCCA +
Preference number: 3 (lower is better)
Translates to: ARVPMAGLVATA*RKASRDQPSFP
Trigger: TGGGAATGAGGGTTGGTCCCGGGAGGCTTTTCTCCAAGCTGTTGCCACCAGACCCGCCATGGGAACCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 72 bp ACACTTGACCATGCAAGGGGACACTCAGATACACGGTaGCCAGCCCGGCCGACTGGACTTCAGGGGGACAGC +
Preference number: 3 (lower is better)
Translates to: TLDHARGHSDTR*PARPTGLQGDS
Trigger: GCTGTCCCCCTGAAGTCCAGTCGGCCGGGCTGGTCACCGTGTATCTGAGTGTCCCCTTGCATGGTCAAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR CCA 72 bp TGTGTGTTTGCAGCGCAAGAGGAGCTCAGCCCGTCCTaGCTGCCGTCCTGGGTCGAAGCAGCAAGTGTCTTC +
Preference number: 3 (lower is better)
Translates to: CVFAAQEELSPS*LPSWVEAASVF
Trigger: GAAGACACTTGCTGCTTCGACCCAGGACGGCAGCCAGGACGGGCTGAGCTCCTCTTGCGCTGCAAACACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 72 bp GCCTCTCTCGTTAGAAACGGGCCCTGCTGGTTGGGCTaGAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCC +
Preference number: 3 (lower is better)
Translates to: ASLVRNGPCWLG*KVTGEAPTSSP
Trigger: GGGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGCCCGTTTCTAACGAGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR TCA 72 bp GGAGGACGGCAGAAGCGGCCACCGTGGCACATGGGGTaGGGACTCAGATGCCAGGAGGATGTCCTCATTTTT +
Preference number: 3 (lower is better)
Translates to: GGRQKRPPWHMG*GLRCQEDVLIF
Trigger: AAAAATGAGGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCTGCCGTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 72 bp AGAAAGGCAGCTTTGCTCTGGGTCATCAGGCTCAAGTaGCTGCTCTGGGCCACCTTCGGAAGCCTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: RKAALLWVIRLK*LLWATFGSLVE
Trigger: CTCCACCAGGCTTCCGAAGGTGGCCCAGAGCAGGCACTTGAGCCTGATGACCCAGAGCAAAGCTGCCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 72 bp CTGCCCACGTCCACAGGAAGTGGCCGACGTCTCCTCTaGCTTTGGTTTAGTGGCCCCACACTTCATCACCTC +
Preference number: 3 (lower is better)
Translates to: LPTSTGSGRRLL*LWFSGPTLHHL
Trigger: GAGGTGATGAAGTGTGGGGCCACTAAACCAAAGGCAGAGGAGACGTCGGCCACTTCCTGTGGACGTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CAA 90 bp GCAGTCCCAACCTCAGGGGACCTCTCTGGGGCCACAGGCATCATCTGGCTAGAATTCCCCATGTCACACTaGACCATGCAAGGGGACACT +
Preference number: 3 (lower is better)
Translates to: AVPTSGDLSGATGIIWLEFPMSH*TMQGDT
Trigger: AGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAA...TTCTAGCCAGATGATGCCTGTGGCCCCAGAGAGGTCCCCTGAGGTTGGGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR TCA 72 bp AAGCCTCCCGGGACCAACCCTCATTCCCAGGTCCACTaGTCTGGGGTAGGAGTAGCCAAGTGTTCTGACAGG +
Preference number: 3 (lower is better)
Translates to: KPPGTNPHSQVH*SGVGVAKCSDR
Trigger: CCTGTCAGAACACTTGGCTACTCCTACCCCAGATCAGTGGACCTGGGAATGAGGGTTGGTCCCGGGAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 72 bp GACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTaGTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAA +
Preference number: 3 (lower is better)
Translates to: DTQSFTVGPCSS*CRLPFLKVGGQ
Trigger: TTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
3UTR CCA 72 bp CCCAGGCGCGATCGTACACACGCTAGGATGCATTCCTaGAGCAGACGCAATTCTCTAGCCCGAGTGGGGAAT +
Preference number: 3 (lower is better)
Translates to: PRRDRTHARMHS*SRRNSLARVGN
Trigger: ATTCCCCACTCGGGCTAGAGAATTGCGTCTGCTCCAGGAATGCATCCTAGCGTGTGTACGATCGCGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 72 bp GCCACTAAACTGGCAGGCCCTTCCCCATGTCACACTTaGCCATGCAAGGGGACACTCAGATACACGGTGACC +
Preference number: 3 (lower is better)
Translates to: ATKLAGPSPCHT*PCKGTLRYTVT
Trigger: GGTCACCGTGTATCTGAGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAAGGGCCTGCCAGTTTAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR GCA 72 bp CAAAGGAGCTTTAGAGAGCAGAGGAGCCCGAGTCACTaGCACCACTGGGTTCCTCAGTGTCTGTGGGGTTTG +
Preference number: 3 (lower is better)
Translates to: QRSFREQRSPSH*HHWVPQCLWGL
Trigger: CAAACCCCACAGACACTGAGGAACCCAGTGGTGGCAGTGACTCGGGCTCCTCTGCTCTCTAAAGCTCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 72 bp CAGGTGATGCATGTCGTGTCATTTAGCACCTGGTCATaGGATACGGCGAGACCCCCAGGTCCAGGGAAAGGT +
Preference number: 3 (lower is better)
Translates to: QVMHVVSFSTWS*DTARPPGPGKG
Trigger: ACCTTTCCCTGGACCTGGGGGTCTCGCCGTATCTCATGACCAGGTGCTAAATGACACGACATGCATCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 72 bp GGACGGGGACAGGGAGGTTGGTCATCGAAAGGCAGGTaGTGCATGTCGTGTCATTTAGCACCTGGTCATGAG +
Preference number: 3 (lower is better)
Translates to: GRGQGGWSSKGR*CMSCHLAPGHE
Trigger: CTCATGACCAGGTGCTAAATGACACGACATGCATCACCTGCCTTTCGATGACCAACCTCCCTGTCCCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTaGCAGGCCCTTCCCCATGTCACACTTGACCATGCA +
Preference number: 3 (lower is better)
Translates to: MGWRVPSLQPLN*QALPHVTLDHA
Trigger: TGCATGGTCAAGTGTGACATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR CCA 72 bp AAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCATaGACCTTCCCAGGGAAGGGCAGGTTCTTCAGCAGA +
Preference number: 3 (lower is better)
Translates to: KPNVYRFPQERA*TFPGKGRFFSR
Trigger: TCTGCTGAAGAACCTGCCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR-3UTR CAA 90 bp AGACACATCAGCACAGCGGTCCAGGCTCTGGCTCACTCCCCGGGAGGCTTCTGTCTTCATCACCTCACTTaGTCCATGAATTTCACACGT +
Preference number: 3 (lower is better)
Translates to: RHISTAVQALAHSPGGFCLHHLT*SMNFTR
Trigger: ACGTGTGAAATTCATGGACAAAGTGAGGTGATGAAG...ACAGAAGCCTCCCGGGGAGTGAGCCAGAGCCTGGACCGCTGTGCTGATGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 72 bp CCACAGTCTCTCCCTCACATACACACACGGAAGACGTaGCTCACACACACATGCACACACAGGGCACAGGTA +
Preference number: 3 (lower is better)
Translates to: PQSLPHIHTRKT*LTHTCTHRAQV
Trigger: TACCTGTGCCCTGTGTGTGCATGTGTGTGTGAGTCACGTCTTCCGTGTGTGTATGTGAGGGAGAGACTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 72 bp AGGCAGCATATGGTCTGCTGCTTAACAGCCGAGCTCTaGCAATTGGGGACCATTAGGGTGGGTTCTTTTCCC +
Preference number: 3 (lower is better)
Translates to: RQHMVCCLTAEL*QLGTIRVGSFP
Trigger: GGGAAAAGAACCCACCCTAATGGTCCCCAATTGGCAGAGCTCGGCTGTTAAGCAGCAGACCATATGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp GGCATCATCTGGCTAGAAAAGCCCCAGAGACATGAGTaGGCTCAAGTGTGTCCTAATGGGATGGAGAGTCCC +
Preference number: 3 (lower is better)
Translates to: GIIWLEKPQRHE*AQVCPNGMESP
Trigger: GGGACTCTCCATCCCATTAGGACACACTTGAGCCCACTCATGTCTCTGGGGCTTTTCTAGCCAGATGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR CCA 72 bp TTTAGAGAGCAGAGGAGCCCGAGTCACTGCCACCACTaGGTTCCTCAGTGTCTGTGGGGTTTGTGTTCATCA +
Preference number: 3 (lower is better)
Translates to: FREQRSPSHCHH*VPQCLWGLCSS
Trigger: TGATGAACACAAACCCCACAGACACTGAGGAACCCAGTGGTGGCAGTGACTCGGGCTCCTCTGCTCTCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CCA 72 bp CACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTaGGGGCTTCAAACAACAGAAACTGGCTGGACACGG +
Preference number: 3 (lower is better)
Translates to: HAQQSFVSQSRS*GLQTTETGWTR
Trigger: CCGTGTCCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
3UTR CCA 72 bp AGAGACATGAGTGGGCTCAAGTGTGTCCTAATGGGATaGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAG +
Preference number: 3 (lower is better)
Translates to: RDMSGLKCVLMG*RVPSLQPLNWQ
Trigger: CTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATTAGGACACACTTGAGCCCACTCATGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
3UTR CCA 72 bp CCGAGTCACTGCCACCACTGGGTTCCTCAGTGTCTGTaGGGTTTGTGTTCATCATGCCCAGTAGATCTAGAA +
Preference number: 3 (lower is better)
Translates to: PSHCHHWVPQCL*GLCSSCPVDLE
Trigger: TTCTAGATCTACTGGGCATGATGAACACAAACCCCACAGACACTGAGGAACCCAGTGGTGGCAGTGACTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR-3UTR CAA 90 bp ATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCCCCACACGCACTTTCTaGCCAAAGCCGCGCGGCACT +
Preference number: 3 (lower is better)
Translates to: MFRVILTKPNVYRFPQERPTRTF*PKPRGT
Trigger: AGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGG...GCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453700.7
3UTR CCA 72 bp TCCCCCAGTCCTGTCTATGAGTATAAATTATGCTGCTaGTTAAAACCGCTTGCTCATGAGAACAGGACACCC +
Preference number: 3 (lower is better)
Translates to: SPSPVYEYKLCC*LKPLAHENRTP
Trigger: GGGTGTCCTGTTCTCATGAGCAAGCGGTTTTAACCAGCAGCATAATTTATACTCATAGACAGGACTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 72 bp CCTTCCCCCAGTCCTGTCTATGAGTATAAATTATGCTaGTGGTTAAAACCGCTTGCTCATGAGAACAGGACA +
Preference number: 3 (lower is better)
Translates to: PSPSPVYEYKLC*WLKPLAHENRT
Trigger: TGTCCTGTTCTCATGAGCAAGCGGTTTTAACCAGCAGCATAATTTATACTCATAGACAGGACTGGGGGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR GCA 72 bp CACATGTACATGAAAATTCCCATCCAGAATGTAGTTTaGTACAGTGAACACCAATGTCAGGAGCAGGCATCA +
Preference number: 3 (lower is better)
Translates to: HMYMKIPIQNVV*YSEHQCQEQAS
Trigger: TGATGCCTGCTCCTGACATTGGTGTTCACTGTAGCAAACTACATTCTGGATGGGAATTTTCATGTACATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR TCA 72 bp TTAGTGGCCCCACACTTCATCACCTCACTTTGTCCATaGATTTCACACGTTTTCTTACAAGAGCTCTGTAAT +
Preference number: 3 (lower is better)
Translates to: LVAPHFITSLCP*ISHVFLQELCN
Trigger: ATTACAGAGCTCTTGTAAGAAAACGTGTGAAATTCATGGACAAAGTGAGGTGATGAAGTGTGGGGCCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp GCTGCCACAGCGCTGCCTGCTGGGGGATCAAGGTCCCCGCATCCAGGCCTCCAGCTCCAGGCCCACGCCTaGGCCCAGCCCCGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: AATALPAGGSRSPHPGLQLQAHA*AQPRSP
Trigger: AGGGGACCGGGGCTGGGCTCAGGCGTGGGCCTGGAG...CTGGAGGCCTGGATGCGGGGACCTTGATCCCCCAGCAGGCAGCGCTGTGGCAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp GGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGCCCGTGGAGGGAGGGCGCTGCTaGGCTGGCAGGCAACCCTTG +
Preference number: 4 (lower is better)
Translates to: GTRFPVGSGRGFGPSRPVEGGRC*AGRQPL
Trigger: CAAGGGTTGCCTGCCAGCTCAGCAGCGCCCTCCCTC...CACGGGCCTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGCTGGCTGTGCGAGCGTCAGGTaGCGCAGGAAGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ERAVETPGAPGARWGVAGCASVR*RRKASW
Trigger: CCAGCTGGCCTTCCTGCGGCACCTGACGCTCGCACA...GCCAGCCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp GCTGCCACAGCGCTGCCTGCTGGGGGATCAAGGTCCCCGCATCCAGGCCTCCAGGGGGCGGAGCTGCGGTaGCCAGAGACACAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AATALPAGGSRSPHPGLQGAELR*PETQAP
Trigger: GGGGGCCTGTGTCTCTGGGCACCGCAGCTCCGCCCC...CTGGAGGCCTGGATGCGGGGACCTTGATCCCCCAGCAGGCAGCGCTGTGGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGGAGGAGGTGGGAGGCTaGCACAGCGCTGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PMREPWRRREPQEPGGAWEEVGG*HSAACW
Trigger: CCAGCAGGCAGCGCTGTGGCAGCCTCCCACCTCCTC...CCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGTGCGCGGCTGCAGGGTaGGAGCGAGTTGCGGATGGC +
Preference number: 4 (lower is better)
Translates to: PMREPWRRREPQEPGGAWCAAAG*ERVADG
Trigger: GCCATCCGCAACTCGCTCCCACCCTGCAGCCGCGCA...CCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp GAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGCTGGCCGGAGAAGCGACTGCTaGAGGCTCTTGCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ERAVETPGAPGARWGVAGRRSDC*RLLQVA
Trigger: CGCCACCTGCAAGAGCCTGCAGCAGTCGCTTCTCCG...GCCAGCCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp CGGGCCCTCCAGGCCCGTGGACAGGGCCCCCAGGGATTGCGGCTCAGTATACAATGCGGGACACGGGGCTaGAGGGCCGGGAAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RALQARGQGPQGLRLSIQCGTRG*RAGKGV
Trigger: GACCCCCTTCCCGGCCCTGCAGCCCCGTGTCCCGCA...TTGTATACTGAGCCGCAATCCCTGGGGGCCCTGTCCACGGGCCTGGAGGGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGCTGGCGCCATGCTCAGCTGCTaGATCTCCCGGCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: ERAVETPGAPGARWGVAGAMLSC*ISRPIS
Trigger: GGAGATCGGCCGGGAGATCCAGCAGCTGAGCATGGC...GCCAGCCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GAAGGCGGGCTGGACAAGGGGCCCTTCACCAAGAGCGGCCAGGGCGGCGGTCCACGCTGCTCAGCTGGCTaGCGTCGAAGCCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: EGGLDKGPFTKSGQGGGPRCSAG*RRSRGS
Trigger: TGAGCCCCGGCTTCGACGCCAGCCAGCTGAGCAGCG...TGGACCGCCGCCCTGGCCGCTCTTGGTGAAGGGCCCCTTGTCCAGCCCGCCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCTTCACCAAGAGCGGCCAGGGCGGCGGTCCAGGCTAGCAGGGCCCAACTACAGGCTGGCCCGAGAGGATaGCGCCCTCGCGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: PSPRAARAAVQASRAQLQAGPRG*RPRACG
Trigger: ACCGCACGCGCGAGGGCGCCATCCTCTCGGGCCAGC...CTGTAGTTGGGCCCTGCTAGCCTGGACCGCCGCCCTGGCCGCTCTTGGTGAAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGAGGCCCTCCGAGCTGTaGTGGTGGGCGGCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQRPSEL*WWAAER
Trigger: CCTCTCGGCCGCCCACCACCACAGCTCGGAGGGCCT...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp TGGGCGGCGGCTCCGCCTCTCACCACCACAGGTTCGGCGGTTCCTCGGCCACTCGGAGCGAGTTGCGGATaGCGGGCTCGTTGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: WAAAPPLTTTGSAVPRPLGASCG*RARCGA
Trigger: TGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCC...GAGTGGCCGAGGAACCGCCGAACCTGTGGTGGTGAGAGGCGGAGCCGCCGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620087.1
CDS-3UTR CCA 90 bp GAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGCTGGCTGCAGCGAGGGGCACTaGCTCAGCGCCTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: ERAVETPGAPGARWGVAGCSEGH*LSAWKN
Trigger: GTTCTTCCAGGCGCTGAGCCAGTGCCCCTCGCTGCA...GCCAGCCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp AGCCCGGCCGACTGGACTTCAGGGGGACAGCATGTGGCCGCCCATCCACGGGGCAGCACGGCATCGGGCTaGAGGGTGCCGCTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: SPADWTSGGQHVAAHPRGSTASG*RVPLRE
Trigger: CTCTCGCAGCGGCACCCTCCAGCCCGATGCCGTGCT...GCCCCGTGGATGGGCGGCCACATGCTGTCCCCCTGAAGTCCAGTCGGCCGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGGGGCCGTGGGCAGCTaGTCCTGCGGCCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQGAVGS*SCGLQT
Trigger: AGTCTGCAGGCCGCAGGACCAGCTGCCCACGGCCCC...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GAAGGCGGGCTGGACAAGGGGCCCTTCACCAAGAGCGGCCAGGGCGGCGGTCCAGGGTCCAACGGCCTGTaGCTCTGGGTCCGGACCCAG +
Preference number: 4 (lower is better)
Translates to: EGGLDKGPFTKSGQGGGPGSNGL*LWVRTQ
Trigger: CTGGGTCCGGACCCAGAGCCACAGGCCGTTGGACCC...TGGACCGCCGCCCTGGCCGCTCTTGGTGAAGGGCCCCTTGTCCAGCCCGCCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGCCTTCCCAGGGAAGCTaGAGGCCGTGGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQPSQGS*RPWGGW
Trigger: CCACCCACCCCACGGCCTTCAGCTTCCCTGGGAAGG...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp TGGCGTCCCAGGCTCCTGCAGCTTCTCGAGGTGACTGAGACCGATGGGCGGCGGAAAGCCGCGCGGCACTaGGTGCATGGCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WRPRLLQLLEVTETDGRRKAARH*VHGRLG
Trigger: GCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTT...CCGCCGCCCATCGGTCTCAGTCACCTCGAGAAGCTGCAGGAGCCTGGGACGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGGATGGCGGGCTCGTTaGGGGGCATGGCGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQGWRAR*GAWRRR
Trigger: TCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCC...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp ATGGGCGGCGGCTCCGCCTCTCACCACCACAGGTTCGGCGGTTCCTCGGCCACTGACGCTGGGCAGCTGTaGGAGCGTCAGGTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: MGGGSASHHHRFGGSSATDAGQL*ERQVPQ
Trigger: CTGCGGCACCTGACGCTCGCACAGCTGCCCAGCGTC...AGTGGCCGAGGAACCGCCGAACCTGTGGTGGTGAGAGGCGGAGCCGCCGCCCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620087.1
CDS-3UTR GCA 90 bp GCTGCCACAGCGCTGCCTGCTGGGGGATCAAGGTCCCCGCATCCAGGCCTCCAGCATCGGGCTGGAGGGTaGCGCTGCGAGAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: AATALPAGGSRSPHPGLQHRAGG*RCERPG
Trigger: GCCTGGTCTCTCGCAGCGGCACCCTCCAGCCCGATG...CTGGAGGCCTGGATGCGGGGACCTTGATCCCCCAGCAGGCAGCGCTGTGGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGGGTGGAGCCGAGTGTTaGCTGGTGACGTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PMREPWRRREPQEPGGAWGGAEC*LVTWSR
Trigger: CCTGCTCCACGTCACCAGGCAACACTCGGCTCCACC...CCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGCCCGTGGCAGCTTCTCTAGGCTaGTGCAGCAGGGCACCACGC +
Preference number: 4 (lower is better)
Translates to: GTRFPVGSGRGFGPSRPVAASLG*CSRAPR
Trigger: GCGTGGTGCCCTGCTGCACCAGCCTAGAGAAGCTGC...CACGGGCCTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGCCCGTGCACTGGCTCAGCGCCTaGAAGAACTGGGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: GTRFPVGSGRGFGPSRPVHWLSA*KNWALA
Trigger: CGCCAACGCCCAGTTCTTCCAGGCGCTGAGCCAGTG...CACGGGCCTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp TGGCGTCCCAGGCTCCTGCAGCTTCTCGAGGTGACTGAGACCGATGGGCGGCGGCTGAAGGCCGTGGGGTaGGTGGGAGGGGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: WRPRLLQLLEVTETDGRRLKAVG*VGGGGG
Trigger: GCCTCCTCCCCCTCCCACCCACCCCACGGCCTTCAG...CCGCCGCCCATCGGTCTCAGTCACCTCGAGAAGCTGCAGGAGCCTGGGACGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp GCTGCCACAGCGCTGCCTGCTGGGGGATCAAGGTCCCCGCATCCAGGCCTCCAGAGGAGCGCCTGGAGGTaGAGGACGGCAGAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: AATALPAGGSRSPHPGLQRSAWR*RTAEAA
Trigger: GGCCGCTTCTGCCGTCCTCCACCTCCAGGCGCTCCT...CTGGAGGCCTGGATGCGGGGACCTTGATCCCCCAGCAGGCAGCGCTGTGGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGCTGGCAGCTCTAGGAGCGCCTaGAGGTGGAGGACGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ERAVETPGAPGARWGVAGSSRSA*RWRTAE
Trigger: TTCTGCCGTCCTCCACCTCCAGGCGCTCCTAGAGCT...GCCAGCCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGGCCGGAGCACTGGTCTaGAGCTTCATTGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PMREPWRRREPQEPGGAWAGALV*SFIGRQ
Trigger: CTGCCGGCCAATGAAGCTCCAGACCAGTGCTCCGGC...CCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp ACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCGGGGGACGTCCCGGATaGCGTCGGTCAGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: TQQPRDTLPGRKWQGVRAGGRPG*RRSGPR
Trigger: ACGAGGGCCTGACCGACGTCATCCGGGACGTCCCCC...GGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp CTCGAGGTGACTGAGACCGATGGGCGGCGGCTCCGCCTCTCACCACCACAGGTTGGGGGACGTCCCGGATaGCGTCGGTCAGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: LEVTETDGRRLRLSPPQVGGRPG*RRSGPR
Trigger: ACGAGGGCCTGACCGACGTCATCCGGGACGTCCCCC...AACCTGTGGTGGTGAGAGGCGGAGCCGCCGCCCATCGGTCTCAGTCACCTCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620087.1
CDS-3UTR TCA 90 bp TGGGCGGCGGCTCCGCCTCTCACCACCACAGGTTCGGCGGTTCCTCGGCCACTCCACTCAGATACACGGTaGCCAGCCCGGCCGACTGGA +
Preference number: 4 (lower is better)
Translates to: WAAAPPLTTTGSAVPRPLHSDTR*PARPTG
Trigger: TCCAGTCGGCCGGGCTGGTCACCGTGTATCTGAGTG...GAGTGGCCGAGGAACCGCCGAACCTGTGGTGGTGAGAGGCGGAGCCGCCGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620087.1
CDS-3UTR TCA 90 bp GAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGCTGGCCCCTGCTGGTTGGGCTaGAAAGTCACAGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ERAVETPGAPGARWGVAGPCWLG*KVTGEA
Trigger: AGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGG...GCCAGCCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp CCTTCACCAAGAGCGGCCAGGGCGGCGGTCCAGGCTAGCAGGGCCCAACTACAGCCACACCACCCGATCTaGTCGCCGCGCCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PSPRAARAAVQASRAQLQPHHPI*SPRLVV
Trigger: GACCACCAGGCGCGGCGATCAGATCGGGTGGTGTGG...CTGTAGTTGGGCCCTGCTAGCCTGGACCGCCGCCCTGGCCGCTCTTGGTGAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp CCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGACGGTCTCGATCTCCTaGCCTCATGATCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PMREPWRRREPQEPGGAWTVSIS*PHDPPA
Trigger: GGCAGGCGGATCATGAGGTCAGGAGATCGAGACCGT...CCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GAAGGCGGGCTGGACAAGGGGCCCTTCACCAAGAGCGGCCAGGGCGGCGGTCCATCACCTTCACCAGGCTaGGGCAGCGGGCCACGTGTT +
Preference number: 4 (lower is better)
Translates to: EGGLDKGPFTKSGQGGGPSPSPG*GSGPRV
Trigger: AACACGTGGCCCGCTGCCGCAGCCTGGTGAAGGTGA...TGGACCGCCGCCCTGGCCGCTCTTGGTGAAGGGCCCCTTGTCCAGCCCGCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GGGCCTAGGGGTGTGGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTGGCCAGCGAGCGCAGGTaGTGCAGGGCCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: GPRGVALTGHDRRARRPLASERR*CRAESI
Trigger: GATGCTCTCGGCCCTGCAGCACCTGCGCTCGCTGGC...CAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCCTAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGCCGCCGTTGATGACCTaGTGGATCAGATGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PMREPWRRREPQEPGGAWPPLMT*WIRWPP
Trigger: AGGCGGCCATCTGATCCAGCAGGTCATCAACGGCGG...CCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GGGCCTAGGGGTGTGGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTGACCAGGCACAGGCGCTaGAGCGAGGGGCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: GPRGVALTGHDRRARRPLTRHRR*SEGHWL
Trigger: GAGCCAGTGCCCCTCGCTGCAGCGCCTGTGCCTGGT...CAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCCTAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GGCGTGGCTGGCCGGGAGAGAGGCCCCCTTCCTCTTGTGACAAACCAAGGGTCCAACACGGAGGAGGGCTaGGGGCACGCCTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GVAGRERGPLPLVTNQGSNTEEG*GHAWPE
Trigger: CTCGGGCCAGGCGTGCCCCCAGCCCTCCTCCGTGTT...GGACCCTTGGTTTGTCACAAGAGGAAGGGGGCCTCTCTCCCGGCCAGCCACGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp ACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCGCAGGAAGGCCAGCTaGCCGATGGCGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TQQPRDTLPGRKWQGVRARRKAS*PMAATS
Trigger: GGAGGTGGCCGCCATCGGCCAGCTGGCCTTCCTGCG...GGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp GGGCCTAGGGGTGTGGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTGCTTCCCGGTCGGAAGTaGCAGGGGGTTCGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GPRGVALTGHDRRARRPLLPGRK*QGVRAL
Trigger: GAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAG...CAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCCTAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGCCCGGCCGACTGGACTTCAGGGGGACAGCATGTGGCCGCCCATCCACGGGGCCCACTCGCCCCTGCCTaGTCGGAGAGCAAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SPADWTSGGQHVAAHPRGPLAPA*SESKKW
Trigger: CCACTTCTTGCTCTCCGACCAGGCAGGGGCGAGTGG...GCCCCGTGGATGGGCGGCCACATGCTGTCCCCCTGAAGTCCAGTCGGCCGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GCTGCCACAGCGCTGCCTGCTGGGGGATCAAGGTCCCCGCATCCAGGCCTCCAGTCCGGACCCAGGGTGTaGTTGAGGGAGGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: AATALPAGGSRSPHPGLQSGPRV*LREGAA
Trigger: AGCAGCGCCCTCCCTCAACCACACCCTGGGTCCGGA...CTGGAGGCCTGGATGCGGGGACCTTGATCCCCCAGCAGGCAGCGCTGTGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CAA 72 bp TCTGGGCCACCTTCGGAAGCCTGGTGGAGCCGAGTGTaGCCTGGTGACGTGGAGCAGGAGGCGGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SGPPSEAWWSRV*PGDVEQEAGRR
Trigger: CCTCCGCCCCGCCTCCTGCTCCACGTCACCAGGCAACACTCGGCTCCACCAGGCTTCCGAAGGTGGCCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CAA 72 bp GGGCTGGGACAGGACTGCACGCCCACACGCACTTTCTaGCCAAAGCCGCGCGGCACTGCGTGCATGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GLGQDCTPTRTF*PKPRGTACMAG
Trigger: GCCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR TCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGGAGCACCACCTCCTGGTTaGTGTAGCCGGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SIPAGALLAPPRPEHWSGAPPPG*CSRGPG
Trigger: GCCTGGCCCCCGGCTACATCAACCAGGAGGTGGTGC...TCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp TGTGGCCGCCCATCCACGGGGCCCCGGTGGCAGGTGACCACAAACACAACAGCCAGTGGACGCAGCCGCTaGGGTTCAAGCTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CGRPSTGPRWQVTTNTTASGRSR*GSSWPG
Trigger: GCCTGGCCAGCTTGAACCTCAGCGGCTGCGTCCACT...GGCTGTTGTGTTTGTGGTCACCTGCCACCGGGGCCCCGTGGATGGGCGGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp CACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGCACTGCGTGCATGGCCGGAGTGGACGCAGCCGCTaGGGTTCAAGCTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HAHTHFLAKAARHCVHGRSGRSR*GSSWPG
Trigger: GCCTGGCCAGCTTGAACCTCAGCGGCTGCGTCCACT...CCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR TCA 90 bp TGTGGCCGCCCATCCACGGGGCCCCGGTGGCAGGTGACCACAAACACAACAGCCACTGGGCGTTGGCGCTaGAGTAGGGCTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: CGRPSTGPRWQVTTNTTATGRWR*SRAAPA
Trigger: GGCTGGAGCAGCCCTACTTCAGCGCCAACGCCCAGT...GGCTGTTGTGTTTGTGGTCACCTGCCACCGGGGCCCCGTGGATGGGCGGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp GGCGTGGCTGGCCGGGAGAGAGGCCCCCTTCCTCTTGTGACAAACCAAGGGTCCGCAGGCAGCGAGCCATaGAGGCCAGCACGGCATCGG +
Preference number: 4 (lower is better)
Translates to: GVAGRERGPLPLVTNQGSAGSEP*RPARHR
Trigger: CCGATGCCGTGCTGGCCTTCATGGCTCGCTGCCTGC...GGACCCTTGGTTTGTCACAAGAGGAAGGGGGCCTCTCTCCCGGCCAGCCACGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp ACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCGCAGGCAGCGAGCCATaGAGGCCAGCACGGCATCGG +
Preference number: 4 (lower is better)
Translates to: TQQPRDTLPGRKWQGVRAAGSEP*RPARHR
Trigger: CCGATGCCGTGCTGGCCTTCATGGCTCGCTGCCTGC...GGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp GAAGGCGGGCTGGACAAGGGGCCCTTCACCAAGAGCGGCCAGGGCGGCGGTCCATGCTCCCACCACCTCTaGGACCCTCATCTACAGCCC +
Preference number: 4 (lower is better)
Translates to: EGGLDKGPFTKSGQGGGPCSHHL*DPHLQP
Trigger: GGGCTGTAGATGAGGGTCTCAGAGGTGGTGGGAGCA...TGGACCGCCGCCCTGGCCGCTCTTGGTGAAGGGCCCCTTGTCCAGCCCGCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGAGTAGCAGCCAGCCATaGTCAGCTGCTGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: PMREPWRRREPQEPGGAWSSSQP*SAAGSP
Trigger: GGGAGATCCAGCAGCTGAGCATGGCTGGCTGCTACT...CCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGCCCGTGCCCACCATCGGGCACTaGTGGAATCAGCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GTRFPVGSGRGFGPSRPVPTIGH*WNQPAE
Trigger: TTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGG...CACGGGCCTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CCCAGATCCACCTGTGCCAGTGAGCAGAGGCGCCAGGGTGGGGTCAAGACTGCCGCCCGCCCCCTCTGCTaGAGAAGGAAGCGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PRSTCASEQRRQGGVKTAARPLC*RRKRPS
Trigger: TGAGGGCCGCTTCCTTCTGCAGCAGAGGGGGCGGGC...GGCAGTCTTGACCCCACCCTGGCGCCTCTGCTCACTGGCACAGGTGGATCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCTCAGCCCGTCCTGGCTaGCGTCCTGGGTCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: NSQGTRFPVGSGRGFGPSSARPG*RPGSKQ
Trigger: CTGCTTCGACCCAGGACGGCAGCCAGGACGGGCTGA...GGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GCTGCCACAGCGCTGCCTGCTGGGGGATCAAGGTCCCCGCATCCAGGCCTCCAGAGCACCCTCCATCCCTaGAGGAGCACTGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: AATALPAGGSRSPHPGLQSTLHP*RSTAGT
Trigger: GGTGCCAGCAGTGCTCCTGCAGGGATGGAGGGTGCT...CTGGAGGCCTGGATGCGGGGACCTTGATCCCCCAGCAGGCAGCGCTGTGGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGAGAACCCTAGGAGGTaGACCCCGTCTGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQENPRR*TPSAIP
Trigger: CGGGATGGCAGACGGGGTCCACCTCCTAGGGTTCTC...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GGCACGCCTGGCCCGAGAAGGGGCTGGGACAGGACTGCACGCCCACACGCACTTTCTGGGGACAGGCAGTaGACGCAGCCGCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GTPGPRRGWDRTARPHALSGDRQ*TQPLRF
Trigger: GAACCTCAGCGGCTGCGTCCACTGCCTGTCCCCAGA...AAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCCAGGCGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CCA 90 bp CCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGAGGGACCGCAACTGCTaGCACTGCAGGCCGATATTG +
Preference number: 4 (lower is better)
Translates to: PMREPWRRREPQEPGGAWRDRNC*HCRPIL
Trigger: CAATATCGGCCTGCAGTGCCAGCAGTTGCGGTCCCT...CCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp GGGCCTAGGGGTGTGGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTGGGGCCAGGAGGCCTCTaGGAGGCGAAGGCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: GPRGVALTGHDRRARRPLGPGGL*EAKAWS
Trigger: AGACCAAGCCTTCGCCTCCCAGAGGCCTCCTGGCCC...CAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCCTAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCTTCACCAAGAGCGGCCAGGGCGGCGGTCCAGGCTAGCAGGGCCCAACTACAGCACAGCGCTGCCTGCTaGGGGATCAAGGTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: PSPRAARAAVQASRAQLQHSAAC*GIKVPA
Trigger: TGCGGGGACCTTGATCCCCCAGCAGGCAGCGCTGTG...CTGTAGTTGGGCCCTGCTAGCCTGGACCGCCGCCCTGGCCGCTCTTGGTGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGCCCCCTTCCTCTTGTaGCAAACCAAGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQAPFLL*QTKGPW
Trigger: CCAGGGACCCTTGGTTTGTCACAAGAGGAAGGGGGC...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp AACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCGAGGTGGACCCCGTCTaGCATCCCGGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NTTAKGHASRSEVAGGSGEVDPV*HPGCCR
Trigger: CCTGCAGCAGCCGGGATGGCAGACGGGGTCCACCTC...GCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GGGGCTGGGACAGGACTGCACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGTGGCCTTGCACTCGCTaGTCAGCTGGCTGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: GAGTGLHAHTHFLAKAARWPCTR*SAGWRR
Trigger: TCGACGCCAGCCAGCTGAGCAGCGAGTGCAAGGCCA...CCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp CTGGCCCGAGAAGGGGCTGGGACAGGACTGCACGCCCACACGCACTTTCTTGCCGGCTCAGGGTGGCCTTaGACTCGCTGCTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LAREGAGTGLHAHTHFLAGSGWP*TRCSAG
Trigger: GCCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCC...GGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp CACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGCACTGCGTGCATGGCCGGGGAGTGAACAGCGTCTaGTTGAGCTCCCGCACGCGG +
Preference number: 4 (lower is better)
Translates to: HAHTHFLAKAARHCVHGRGVNSV*LSSRTR
Trigger: CCGCGTGCGGGAGCTCAAGCAGACGCTGTTCACTCC...CCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp GGGGCTGGGACAGGACTGCACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGGCTTCTCTAGGCTGGTaGAGCAGGGCACCACGCCGT +
Preference number: 4 (lower is better)
Translates to: GAGTGLHAHTHFLAKAARASLGW*SRAPRR
Trigger: ACGGCGTGGTGCCCTGCTGCACCAGCCTAGAGAAGC...CCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp CGGGCCCTCCAGGCCCGTGGACAGGGCCCCCAGGGATTGCGGCTCAGTATACAATGGCGCCCTCGCGCGTaGGGTCCAGAATCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: RALQARGQGPQGLRLSIQWRPRA*GPESRS
Trigger: ACTTCGAGATTCTGGACCGCACGCGCGAGGGCGCCA...TTGTATACTGAGCCGCAATCCCTGGGGGCCCTGTCCACGGGCCTGGAGGGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp TGGCGTCCCAGGCTCCTGCAGCTTCTCGAGGTGACTGAGACCGATGGGCGGCGGGGGCTGGGACAGGACTaGACGCCCACACGCACTTTC +
Preference number: 4 (lower is better)
Translates to: WRPRLLQLLEVTETDGRRGLGQD*TPTRTF
Trigger: GAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCC...CCGCCGCCCATCGGTCTCAGTCACCTCGAGAAGCTGCAGGAGCCTGGGACGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CCCAGATCCACCTGTGCCAGTGAGCAGAGGCGCCAGGGTGGGGTCAAGACTGCCCACTCTGTGCGCGGCTaGAGGGTGGGAGCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: PRSTCASEQRRQGGVKTAHSVRG*RVGASC
Trigger: GCAACTCGCTCCCACCCTGCAGCCGCGCACAGAGTG...GGCAGTCTTGACCCCACCCTGGCGCCTCTGCTCACTGGCACAGGTGGATCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GTCCCACCATCGGGCACTGCTGGAATCAGCCTGCAGAAGGGTCCCTCTGGCCAGGCTGGAGGGTGCCGCTaGGAGAGACCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: VPPSGTAGISLQKGPSGQAGGCR*ERPGTG
Trigger: GCCTGTGCCTGGTCTCTCGCAGCGGCACCCTCCAGC...CTGGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCGCTCGGCCTGGAAGCTaGGGAGAAGCGACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: NSQGTRFPVGSGRGFGPSARPGS*GEATAA
Trigger: TGCAGCAGTCGCTTCTCCGCAGCTTCCAGGCCGAGC...GGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp GGGCCTAGGGGTGTGGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTGCAGGCCACTCGCCCCTaGCTGGTCGGAGAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GPRGVALTGHDRRARRPLQATRP*LVGEQE
Trigger: TTCTTGCTCTCCGACCAGGCAGGGGCGAGTGGCCTG...CAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCCTAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CTCCAGGCCCGTGGACAGGGCCCCCAGGGATTGCGGCTCAGTATACAAACCCCCTGCCACAGCGCTGCCTaGTGGGGGATCAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: LQARGQGPQGLRLSIQTPCHSAA*WGIKVP
Trigger: GGGGACCTTGATCCCCCAGCAGGCAGCGCTGTGGCA...GGGGGTTTGTATACTGAGCCGCAATCCCTGGGGGCCCTGTCCACGGGCCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGAGGAGCCCGAGTCACTaGCACCACTGGGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQRSPSH*HHWVPQ
Trigger: CTGAGGAACCCAGTGGTGGCAGTGACTCGGGCTCCT...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GGACTGCACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGCACTGCGTGCATCGGGGCTCACGTCGATaGCCAGCGAGCGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GLHAHTHFLAKAARHCVHRGSRR*PASAGA
Trigger: AGCACCTGCGCTCGCTGGCCATCGACGTGAGCCCCG...ATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CCA 90 bp GGGCCTAGGGGTGTGGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTGTCTGGGGACAGGCAGTaGACGCAGCCGCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GPRGVALTGHDRRARRPLSGDRQ*TQPLRF
Trigger: GAACCTCAGCGGCTGCGTCCACTGCCTGTCCCCAGA...CAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCCTAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGGAGCGGAGCAGCGAGTCTaGGGACAGGCAGTGGACGCA +
Preference number: 4 (lower is better)
Translates to: SIPAGALLAPPRPEHWSGAEQRV*GQAVDA
Trigger: TGCGTCCACTGCCTGTCCCCAGACTCGCTGCTCCGC...TCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGACACATCAGCACAGCGGTCCAGGCTCTGGCTCACTCCCCGGGAGGCTTCTGTAGGAGCTGGCAGAGGTaGCGGCCCAGGCCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: RHISTAVQALAHSPGGFCRSWQR*RPRPSE
Trigger: CTCGGAGGGCCTGGGCCGCCACCTCTGCCAGCTCCT...ACAGAAGCCTCCCGGGGAGTGAGCCAGAGCCTGGACCGCTGTGCTGATGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGAAGCGGCCACCGTGGCACATGGGGTGAGGACTCAGATGCCAGGAGGATGTCCCAGGGGGACAGCATGTaGCCGCCCATCCACGGGGCC +
Preference number: 4 (lower is better)
Translates to: RSGHRGTWGEDSDARRMSQGDSM*PPIHGA
Trigger: GGCCCCGTGGATGGGCGGCCACATGCTGTCCCCCTG...GGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCGGCAGGGCCGGTGATTaGAGGCCTGGGGATGGTGTA +
Preference number: 4 (lower is better)
Translates to: NSQGTRFPVGSGRGFGPSGRAGD*RPGDGV
Trigger: TACACCATCCCCAGGCCTCCAATCACCGGCCCTGCC...GGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGAGGCTTGGTCTGGTGTaGGTCCCACCATCGGGCACT +
Preference number: 4 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQRLGLV*VPPSGT
Trigger: AGTGCCCGATGGTGGGACCCACACCAGACCAAGCCT...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GGGCCTAGGGGTGTGGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTGCGGGGCCTAGGGGTGTaGCTCTCACAGGCCATGACA +
Preference number: 4 (lower is better)
Translates to: GPRGVALTGHDRRARRPLRGLGV*LSQAMT
Trigger: TGTCATGGCCTGTGAGAGCCACACCCCTAGGCCCCG...CAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCCTAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCCAGATCCACCTGTGCCAGTGAGCAGAGGCGCCAGGGTGGGGTCAAGACTGCCTCCTGGCAGGGCCTCTaGGGGCAGCAGATGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PRSTCASEQRRQGGVKTASWQGL*GQQMAR
Trigger: CCTTGCCATCTGCTGCCCCCAGAGGCCCTGCCAGGA...GGCAGTCTTGACCCCACCCTGGCGCCTCTGCTCACTGGCACAGGTGGATCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGTTCCCATGGCGGGTCTaGTGGCAACAGCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PMREPWRRREPQEPGGAWFPWRV*WQQLGE
Trigger: TTCTCCAAGCTGTTGCCACCAGACCCGCCATGGGAA...CCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp TGGCGTCCCAGGCTCCTGCAGCTTCTCGAGGTGACTGAGACCGATGGGCGGCGGTGCCAGGGACGGAGATaGGGAAGGCGTGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: WRPRLLQLLEVTETDGRRCQGRR*GRRGGS
Trigger: AGAACCTCCACGCCTTCCTCATCTCCGTCCCTGGCA...CCGCCGCCCATCGGTCTCAGTCACCTCGAGAAGCTGCAGGAGCCTGGGACGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACGAGAGGGAGCGCAGGTaGCGCAGCCGGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNERERR*RSRARS
Trigger: GCTCCTGGCCCGGCTGCGTCACCTGCGCTCCCTCTC...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGAGAGGGAGCGCAGGTaGCGCAGCCGGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACERERR*RSRARS
Trigger: GCTCCTGGCCCGGCTGCGTCACCTGCGCTCCCTCTC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp ACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCTGCAGCTTCTCGAGGTaGCTGAGACCGATGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TQQPRDTLPGRKWQGVRACSFSR*LRPMGG
Trigger: GCCGCCCATCGGTCTCAGTCACCTCGAGAAGCTGCA...GGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp CACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGCACTGCGTGCATGGCCGGGAACTCCTGACCTCGTaGTCCACCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HAHTHFLAKAARHCVHGRELLTS*STHLSL
Trigger: GAGGCTGAGGTGGGTGGATCACGAGGTCAGGAGTTC...CCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR TCA 90 bp AAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGGGCAGGGCCGGTaGTTGGAGGCCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: KLHRATVPMREPWRRREPQGQGR*LEAWGW
Trigger: CCATCCCCAGGCCTCCAATCACCGGCCCTGCCCCTG...GGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CTGGCCCGAGAAGGGGCTGGGACAGGACTGCACGCCCACACGCACTTTCTTGCCAGCGAGCGCAGGTGCTaGAGGGCCGAGAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: LAREGAGTGLHAHTHFLASERRC*RAESIL
Trigger: CAAGATGCTCTCGGCCCTGCAGCACCTGCGCTCGCT...GGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp CCCAGATCCACCTGTGCCAGTGAGCAGAGGCGCCAGGGTGGGGTCAAGACTGCCTGGCCTTGCACTCGCTaGTCAGCTGGCTGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: PRSTCASEQRRQGGVKTAWPCTR*SAGWRR
Trigger: TCGACGCCAGCCAGCTGAGCAGCGAGTGCAAGGCCA...GGCAGTCTTGACCCCACCCTGGCGCCTCTGCTCACTGGCACAGGTGGATCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGGAGGAGTGAACAGCGTCTaGTTGAGCTCCCGCACGCGG +
Preference number: 4 (lower is better)
Translates to: SIPAGALLAPPRPEHWSGGVNSV*LSSRTR
Trigger: CCGCGTGCGGGAGCTCAAGCAGACGCTGTTCACTCC...TCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GGGGCTGGGACAGGACTGCACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGCAGGACTTGGGCAGCTaGAGGGCATCCAGCACGACA +
Preference number: 4 (lower is better)
Translates to: GAGTGLHAHTHFLAKAARQDLGS*RASSTT
Trigger: TGTCGTGCTGGATGCCCTGCAGCTGCCCAAGTCCTG...CCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp CGGGCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCGGATGGCGGGCTCGTTaGGGGGCATGGCGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RALLVGLKSHRRGSNQQSGWRAR*GAWRRR
Trigger: TCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCC...GGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp GCTGCCACAGCGCTGCCTGCTGGGGGATCAAGGTCCCCGCATCCAGGCCTCCAGCGCAACTGCTGGCACTaGAGGCCGATATTGACCAGC +
Preference number: 4 (lower is better)
Translates to: AATALPAGGSRSPHPGLQRNCWH*RPILTS
Trigger: GCTGGTCAATATCGGCCTGCAGTGCCAGCAGTTGCG...CTGGAGGCCTGGATGCGGGGACCTTGATCCCCCAGCAGGCAGCGCTGTGGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp ATGGGCGGCGGCTCCGCCTCTCACCACCACAGGTTCGGCGGTTCCTCGGCCACTCGCAACTGCTGGCACTaGAGGCCGATATTGACCAGC +
Preference number: 4 (lower is better)
Translates to: MGGGSASHHHRFGGSSATRNCWH*RPILTS
Trigger: GCTGGTCAATATCGGCCTGCAGTGCCAGCAGTTGCG...AGTGGCCGAGGAACCGCCGAACCTGTGGTGGTGAGAGGCGGAGCCGCCGCCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620087.1
CDS-3UTR GCA 90 bp GAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGCTGGCTTAACAGCCGAGCTCTaGCAATTGGGGACCATTAGG +
Preference number: 4 (lower is better)
Translates to: ERAVETPGAPGARWGVAGLTAEL*QLGTIR
Trigger: CCTAATGGTCCCCAATTGGCAGAGCTCGGCTGTTAA...GCCAGCCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGTCAGGCTCAAGTGCCTaGTCTGGGCCACCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQSGSSA*SGPPSE
Trigger: TTCCGAAGGTGGCCCAGAGCAGGCACTTGAGCCTGA...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCTGTCTTCCCGCCCTGTaGACAGACAGGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NSQGTRFPVGSGRGFGPSCLPAL*TDRSQE
Trigger: CTCCTGGGACCTGTCTGTGCACAGGGCGGGAAGACA...GGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACGCTGGCCCGAGAGGATaGCGCCCTCGCGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNAGPRG*RPRACG
Trigger: ACCGCACGCGCGAGGGCGCCATCCTCTCGGGCCAGC...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGCTGGCCCGAGAGGATaGCGCCCTCGCGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACAGPRG*RPRACG
Trigger: ACCGCACGCGCGAGGGCGCCATCCTCTCGGGCCAGC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp AGAAGCGGCCACCGTGGCACATGGGGTGAGGACTCAGATGCCAGGAGGATGTCCGGCCCGAGAAGGGGCTaGGACAGGACTGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: RSGHRGTWGEDSDARRMSGPRRG*DRTARP
Trigger: TGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCC...GGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACGGCTGGGGGCACGCCTaGCCCGAGAAGGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNGWGHA*PEKGLG
Trigger: TCCCAGCCCCTTCTCGGGCCAGGCGTGCCCCCAGCC...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGGCTGGGGGCACGCCTaGCCCGAGAAGGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACGWGHA*PEKGLG
Trigger: TCCCAGCCCCTTCTCGGGCCAGGCGTGCCCCCAGCC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp ACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCGAGTTGCGGATaGCGGGCTCGTTGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: TSQSNSPHERAVETPGAPGASCG*RARCGA
Trigger: TGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCC...TGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCCGCAGGAAGGCCAGCTaGCCGATGGCGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCRRKAS*PMAATS
Trigger: GGAGGTGGCCGCCATCGGCCAGCTGGCCTTCCTGCG...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp GCAGTCCCAACCTCAGGGGACCTCTCTGGGGCCACAGGCATCATCTGGCTAGAAGCGGGCCGCTCGGCCTaGAAGCTGCGGAGAAGCGAC +
Preference number: 4 (lower is better)
Translates to: AVPTSGDLSGATGIIWLEAGRSA*KLRRSD
Trigger: GTCGCTTCTCCGCAGCTTCCAGGCCGAGCGGCCCGC...TTCTAGCCAGATGATGCCTGTGGCCCCAGAGAGGTCCCCTGAGGTTGGGACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp GGCGTGGCTGGCCGGGAGAGAGGCCCCCTTCCTCTTGTGACAAACCAAGGGTCCTCCACGGGGCCCCGGTaGCAGGTGACCACAAACACA +
Preference number: 4 (lower is better)
Translates to: GVAGRERGPLPLVTNQGSSTGPR*QVTTNT
Trigger: TGTGTTTGTGGTCACCTGCCACCGGGGCCCCGTGGA...GGACCCTTGGTTTGTCACAAGAGGAAGGGGGCCTCTCTCCCGGCCAGCCACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp AAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCTGAAGGCCGTGGGGTaGGTGGGAGGGGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KLHRATVPMREPWRRREPLKAVG*VGGGGG
Trigger: GCCTCCTCCCCCTCCCACCCACCCCACGGCCTTCAG...GGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp ACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCCCCAGGAACGCGCATaGACCTTCCCAGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TQQPRDTLPGRKWQGVRAPQERA*TFPGKL
Trigger: CAGCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGG...GGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp ACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCACTGCAGGAGCACTGCTaGCACCGCCAAGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: TSQSNSPHERAVETPGAPLQEHC*HRQGRS
Trigger: GCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAG...TGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCCACGTCCACAGGAAGTaGCCGACGTCTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: NSQGTRFPVGSGRGFGPSHVHRK*PTSPLP
Trigger: AGGCAGAGGAGACGTCGGCCACTTCCTGTGGACGTG...GGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGCTGGTGGCAACAGCTTaGAGAAAAGCCTCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQLVATA*RKASRD
Trigger: GTCCCGGGAGGCTTTTCTCCAAGCTGTTGCCACCAG...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp CAGCCTGCAGAAGGGTCCCTCTGGCCAGGAGGCAAAGGTTCTGCACTGGGTGCAAGAGGCGCAGGGAAGTaGGGTGGCAGCCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QPAEGSLWPGGKGSALGARGAGK*GGSPRG
Trigger: ACCTCTCGGGCTGCCACCTCACTTCCCTGCGCCTCT...TGCACCCAGTGCAGAACCTTTGCCTCCTGGCCAGAGGGACCCTTCTGCAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp CTGGCCCGAGAAGGGGCTGGGACAGGACTGCACGCCCACACGCACTTTCTTGCCAAGGCGTGGAGGTTCTaGGGAGTGCGGTCGCTAAGC +
Preference number: 4 (lower is better)
Translates to: LAREGAGTGLHAHTHFLAKAWRF*GVRSLS
Trigger: GCTTAGCGACCGCACTCCTCAGAACCTCCACGCCTT...GGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR TCA 90 bp CGGGCCCTCCAGGCCCGTGGACAGGGCCCCCAGGGATTGCGGCTCAGTATACAACATTCCCAGGTCCACTaGTCTGGGGTAGGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: RALQARGQGPQGLRLSIQHSQVH*SGVGVA
Trigger: GGCTACTCCTACCCCAGATCAGTGGACCTGGGAATG...TTGTATACTGAGCCGCAATCCCTGGGGGCCCTGTCCACGGGCCTGGAGGGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCCCGTGCCTCCCACCTaGCCGGCTAGGGATGCTCGA +
Preference number: 4 (lower is better)
Translates to: KLHRATVPMREPWRRREPPVPPT*PARDAR
Trigger: TCGAGCATCCCTAGCCGGGCAGGTGGGAGGCACGGG...GGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCCCCGTGCCTCCCACCTaGCCGGCTAGGGATGCTCGA +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCPVPPT*PARDAR
Trigger: TCGAGCATCCCTAGCCGGGCAGGTGGGAGGCACGGG...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp AACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCTGCCATCCCGGCTGCTaGAGGGTGCATGTCATCATC +
Preference number: 4 (lower is better)
Translates to: NSQGTRFPVGSGRGFGPSCHPGC*RVHVII
Trigger: GATGATGACATGCACCCTGCAGCAGCCGGGATGGCA...GGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GGGCCTAGGGGTGTGGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTGGTCAAGGCACAGGGCTaGAAGCTTCCGACAGGTACG +
Preference number: 4 (lower is better)
Translates to: GPRGVALTGHDRRARRPLVKAQG*KLPTGT
Trigger: CGTACCTGTCGGAAGCTTGCAGCCCTGTGCCTTGAC...CAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCCTAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGCCCGTATCTCCTTCACCAGCTaGCTCACTTTGTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: RDTLPGRKWQGVRALQARISFTS*LTLSSL
Trigger: GAGCGAGGACAAAGTGAGGCAGCTGGTGAAGGAGAT...ACGGGCCTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGGACAGGACTTGGGCAGCTaGAGGGCATCCAGCACGACA +
Preference number: 4 (lower is better)
Translates to: SIPAGALLAPPRPEHWSGQDLGS*RASSTT
Trigger: TGTCGTGCTGGATGCCCTGCAGCTGCCCAAGTCCTG...TCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAAAGCCGCGCGGCACTaGGTGCATGGCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACKAARH*VHGRLG
Trigger: GCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CGGGCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCTGTGCGAGCGTCAGGTaGCGCAGGAAGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RALLVGLKSHRRGSNQQSCASVR*RRKASW
Trigger: CCAGCTGGCCTTCCTGCGGCACCTGACGCTCGCACA...GGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp GCAGTCCCAACCTCAGGGGACCTCTCTGGGGCCACAGGCATCATCTGGCTAGAAACCAGGCACAGGCGCTaGAGCGAGGGGCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: AVPTSGDLSGATGIIWLETRHRR*SEGHWL
Trigger: GAGCCAGTGCCCCTCGCTGCAGCGCCTGTGCCTGGT...TTCTAGCCAGATGATGCCTGTGGCCCCAGAGAGGTCCCCTGAGGTTGGGACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCGCTGGAGGGTGCCGCTaGGAGAGACCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCAGGCR*ERPGTG
Trigger: GCCTGTGCCTGGTCTCTCGCAGCGGCACCCTCCAGC...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GTGACCACAAACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGCATCGGGCTGGAGGGTaGCGCTGCGAGAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: VTTNTTAKGHASRSEVAGHRAGG*RCERPG
Trigger: GCCTGGTCTCTCGCAGCGGCACCCTCCAGCCCGATG...CCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTTTGTGGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp CCTTCACCAAGAGCGGCCAGGGCGGCGGTCCAGGCTAGCAGGGCCCAACTACAGAGGGCCCCCAGGGATTaGGGCTCAGTATACAAACCC +
Preference number: 4 (lower is better)
Translates to: PSPRAARAAVQASRAQLQRAPRD*GSVYKP
Trigger: GGGTTTGTATACTGAGCCGCAATCCCTGGGGGCCCT...CTGTAGTTGGGCCCTGCTAGCCTGGACCGCCGCCCTGGCCGCTCTTGGTGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGCCCGTGGAATCAGATCTGTGCTaGGGACGTGACTCAGGATGT +
Preference number: 4 (lower is better)
Translates to: GTRFPVGSGRGFGPSRPVESDLC*GRDSGC
Trigger: ACATCCTGAGTCACGTCCCCAGCACAGATCTGATTC...CACGGGCCTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCCGCTGCTCAGCTGGCTaGCGTCGAAGCCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCRCSAG*RRSRGS
Trigger: TGAGCCCCGGCTTCGACGCCAGCCAGCTGAGCAGCG...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACAGGCCCTCCGAGCTGTaGTGGTGGGCGGCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNRPSEL*WWAAER
Trigger: CCTCTCGGCCGCCCACCACCACAGCTCGGAGGGCCT...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAGGCCCTCCGAGCTGTaGTGGTGGGCGGCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRPSEL*WWAAER
Trigger: CCTCTCGGCCGCCCACCACCACAGCTCGGAGGGCCT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAGGAGCTGGCAGAGGTaGCGGCCCAGGCCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRSWQR*RPRPSE
Trigger: CTCGGAGGGCCTGGGCCGCCACCTCTGCCAGCTCCT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCAACACGGAGGAGGGCTaGGGGCACGCCTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTNTEEG*GHAWPE
Trigger: CTCGGGCCAGGCGTGCCCCCAGCCCTCCTCCGTGTT...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAACACGGAGGAGGGCTaGGGGCACGCCTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACNTEEG*GHAWPE
Trigger: CTCGGGCCAGGCGTGCCCCCAGCCCTCCTCCGTGTT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp ATGGGCGGCGGCTCCGCCTCTCACCACCACAGGTTCGGCGGTTCCTCGGCCACTTGGCGGAGGAGAAGTTaGACCCAATCAGCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: MGGGSASHHHRFGGSSATWRRRS*TQSARG
Trigger: ACCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCA...AGTGGCCGAGGAACCGCCGAACCTGTGGTGGTGAGAGGCGGAGCCGCCGCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620087.1
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCGCAGGAAGGCCAGCTaGCCGATGGCGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRRKAS*PMAATS
Trigger: GGAGGTGGCCGCCATCGGCCAGCTGGCCTTCCTGCG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp GTCCCACCATCGGGCACTGCTGGAATCAGCCTGCAGAAGGGTCCCTCTGGCCAGTGCAGCGAGGGGCACTaGCTCAGCGCCTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VPPSGTAGISLQKGPSGQCSEGH*LSAWKN
Trigger: GTTCTTCCAGGCGCTGAGCCAGTGCCCCTCGCTGCA...CTGGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GCAGTCCCAACCTCAGGGGACCTCTCTGGGGCCACAGGCATCATCTGGCTAGAACCCATGAGAGAGCCGTaGAGACGCCGGGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: AVPTSGDLSGATGIIWLEPMREP*RRREPQ
Trigger: CTGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGG...TTCTAGCCAGATGATGCCTGTGGCCCCAGAGAGGTCCCCTGAGGTTGGGACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp AAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCTTCCCGGTCGGAAGTaGCAGGGGGTTCGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: KLHRATVPMREPWRRREPLPGRK*QGVRAL
Trigger: GAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAG...GGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp AGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGCCCGTGCCACAGGCATCATCTaGCTAGAAAAGCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RDTLPGRKWQGVRALQARATGII*LEKPQR
Trigger: TCTCTGGGGCTTTTCTAGCCAGATGATGCCTGTGGC...ACGGGCCTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp GTGACCACAAACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGCTCAGGCCCATGTCCTaGCAGGGCCTCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VTTNTTAKGHASRSEVAGLRPMS*QGLWGQ
Trigger: CTGCCCCCAGAGGCCCTGCCAGGACATGGGCCTGAG...CCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTTTGTGGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CTCCAGGCCCGTGGACAGGGCCCCCAGGGATTGCGGCTCAGTATACAAACCCCCCCCAGGAGGGCCTCTTaGAGAAGAAACCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LQARGQGPQGLRLSIQTPPRRAS*RRNRSG
Trigger: GCCTGAGCGGTTTCTTCTCCAAGAGGCCCTCCTGGG...GGGGGTTTGTATACTGAGCCGCAATCCCTGGGGGCCCTGTCCACGGGCCTGGAG
64% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCGGTCTGGAGCTTCATTaGCCGGCAGGGGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: KLHRATVPMREPWRRREPGLELH*PAGAQP
Trigger: GGGCTGGGCCCCTGCCGGCCAATGAAGCTCCAGACC...GGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp ACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCCAAGGCCGGAGCACTaGTCTGGAGCTTCATTGGCC +
Preference number: 4 (lower is better)
Translates to: TQQPRDTLPGRKWQGVRAPRPEH*SGASLA
Trigger: GGCCAATGAAGCTCCAGACCAGTGCTCCGGCCTTGG...GGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGCCCGGCCGACTGGACTTCAGGGGGACAGCATGTGGCCGCCCATCCACGGGGCCTCAGGAGGCTGATGTaGGAGAATCGCTTGAACCTG +
Preference number: 4 (lower is better)
Translates to: SPADWTSGGQHVAAHPRGLRRLM*ENRLNL
Trigger: CAGGTTCAAGCGATTCTCCCACATCAGCCTCCTGAG...GCCCCGTGGATGGGCGGCCACATGCTGTCCCCCTGAAGTCCAGTCGGCCGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGGAAAGGCTACCAGGAACTaGCAGCAGCGCTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SIPAGALLAPPRPEHWSGKATRN*QQRSAH
Trigger: GTGGGCAGAGCGCTGCTGCCAGTTCCTGGTAGCCTT...TCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGCCCGGCCGACTGGACTTCAGGGGGACAGCATGTGGCCGCCCATCCACGGGGCCTGGGCAGTCTCACGTaGACAGACAATGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: SPADWTSGGQHVAAHPRGLGSLT*TDNAQK
Trigger: CTTCTGAGCATTGTCTGTCCACGTGAGACTGCCCAG...GCCCCGTGGATGGGCGGCCACATGCTGTCCCCCTGAAGTCCAGTCGGCCGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp TGGCGTCCCAGGCTCCTGCAGCTTCTCGAGGTGACTGAGACCGATGGGCGGCGGGAGCTCTGCTGTCTCTaGGCAGTCTCACGTGGACAG +
Preference number: 4 (lower is better)
Translates to: WRPRLLQLLEVTETDGRRELCCL*AVSRGQ
Trigger: CTGTCCACGTGAGACTGCCCAGAGACAGCAGAGCTC...CCGCCGCCCATCGGTCTCAGTCACCTCGAGAAGCTGCAGGAGCCTGGGACGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CAA 72 bp CCACGGGGGCAGGTCAGCGGGACGGGGACAGGGAGGTaGGTCATCGAAAGGCAGGTGATGCATGTCGTGTCA +
Preference number: 4 (lower is better)
Translates to: PRGQVSGTGTGR*VIERQVMHVVS
Trigger: TGACACGACATGCATCACCTGCCTTTCGATGACCAACCTCCCTGTCCCCGTCCCGCTGACCTGCCCCCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCGCACCACCTCCTGGTTaGTGTAGCCGGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTAPPPG*CSRGPG
Trigger: GCCTGGCCCCCGGCTACATCAACCAGGAGGTGGTGC...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGCACCACCTCCTGGTTaGTGTAGCCGGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACAPPPG*CSRGPG
Trigger: GCCTGGCCCCCGGCTACATCAACCAGGAGGTGGTGC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp AACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCGTGCTTCAACATGTCTaGGAGCGCGGGCATGTACAC +
Preference number: 4 (lower is better)
Translates to: NSQGTRFPVGSGRGFGPSVLQHV*ERGHVH
Trigger: GTGTACATGCCCGCGCTCTCAGACATGTTGAAGCAC...GGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCACTGGGCGTTGGCGCTaGAGTAGGGCTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCTGRWR*SRAAPA
Trigger: GGCTGGAGCAGCCCTACTTCAGCGCCAACGCCCAGT...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACGCAGGCAGCGAGCCATaGAGGCCAGCACGGCATCGG +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNAGSEP*RPARHR
Trigger: CCGATGCCGTGCTGGCCTTCATGGCTCGCTGCCTGC...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGCAGGCAGCGAGCCATaGAGGCCAGCACGGCATCGG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACAGSEP*RPARHR
Trigger: CCGATGCCGTGCTGGCCTTCATGGCTCGCTGCCTGC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp CGGGCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCTGCAGCTTCTCGAGGTaGCTGAGACCGATGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RALLVGLKSHRRGSNQQSCSFSR*LRPMGG
Trigger: GCCGCCCATCGGTCTCAGTCACCTCGAGAAGCTGCA...GGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp CAGCCTGCAGAAGGGTCCCTCTGGCCAGGAGGCAAAGGTTCTGCACTGGGTGCACACTCAGATACACGGTaGCCAGCCCGGCCGACTGGA +
Preference number: 4 (lower is better)
Translates to: QPAEGSLWPGGKGSALGAHSDTR*PARPTG
Trigger: TCCAGTCGGCCGGGCTGGTCACCGTGTATCTGAGTG...TGCACCCAGTGCAGAACCTTTGCCTCCTGGCCAGAGGGACCCTTCTGCAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp GCTGCCACAGCGCTGCCTGCTGGGGGATCAAGGTCCCCGCATCCAGGCCTCCAGACAGCAAAGCAAATGTaGGACACCACCCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: AATALPAGGSRSPHPGLQTAKQM*DTTPQD
Trigger: GTCCTGTGGGGTGGTGTCTCACATTTGCTTTGCTGT...CTGGAGGCCTGGATGCGGGGACCTTGATCCCCCAGCAGGCAGCGCTGTGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACGGATCCGCAACCCCGTaGCTCCCACCTGCCCGGCTA +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNGSATP*LPPARL
Trigger: TAGCCGGGCAGGTGGGAGGCACGGGGTTGCGGATCC...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGCCGGCTGCTGCAGGGTaGATGTCATCATCATCATTG +
Preference number: 4 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQPAAAG*MSSSSL
Trigger: CAATGATGATGATGACATGCACCCTGCAGCAGCCGG...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CTGGCCCGAGAAGGGGCTGGGACAGGACTGCACGCCCACACGCACTTTCTTGCCAGTAGCAGCCAGCCATaGTCAGCTGCTGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: LAREGAGTGLHAHTHFLASSSQP*SAAGSP
Trigger: GGGAGATCCAGCAGCTGAGCATGGCTGGCTGCTACT...GGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGCCAGCGAGCGCAGGTaGTGCAGGGCCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACASERR*CRAESI
Trigger: GATGCTCTCGGCCCTGCAGCACCTGCGCTCGCTGGC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GCAGTCCCAACCTCAGGGGACCTCTCTGGGGCCACAGGCATCATCTGGCTAGAAGGCTCAGGGTGGCCTTaGACTCGCTGCTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AVPTSGDLSGATGIIWLEGSGWP*TRCSAG
Trigger: GCCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCC...TTCTAGCCAGATGATGCCTGTGGCCCCAGAGAGGTCCCCTGAGGTTGGGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGGATGGCGGGCTCGTTaGGGGGCATGGCGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACGWRAR*GAWRRR
Trigger: TCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGTCCCCGACACTCTGTaGGCGGCTGCAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACVPDTL*AAAGWE
Trigger: CTCCCACCCTGCAGCCGCGCACAGAGTGTCGGGGAC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGACGCTGGGCAGCTGTaGGAGCGTCAGGTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACDAGQL*ERQVPQ
Trigger: CTGCGGCACCTGACGCTCGCACAGCTGCCCAGCGTC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCACCAGGCACAGGCGCTaGAGCGAGGGGCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTTRHRR*SEGHWL
Trigger: GAGCCAGTGCCCCTCGCTGCAGCGCCTGTGCCTGGT...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCACCAGGCACAGGCGCTaGAGCGAGGGGCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACTRHRR*SEGHWL
Trigger: GAGCCAGTGCCCCTCGCTGCAGCGCCTGTGCCTGGT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGCTGGAGGGTGCCGCTaGGAGAGACCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACAGGCR*ERPGTG
Trigger: GCCTGTGCCTGGTCTCTCGCAGCGGCACCCTCCAGC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCATCGGGCTGGAGGGTaGCGCTGCGAGAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACHRAGG*RCERPG
Trigger: GCCTGGTCTCTCGCAGCGGCACCCTCCAGCCCGATG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGTTCCCTGCAGGAGCACTaGTGGCACCGCCAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GMESPKSAATKLAGPSPCSLQEH*WHRQGR
Trigger: CCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGA...ACATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GCAGTCCCAACCTCAGGGGACCTCTCTGGGGCCACAGGCATCATCTGGCTAGAAGATACCACCGACGGCTaGAGGGGAGGGGCACGCACA +
Preference number: 4 (lower is better)
Translates to: AVPTSGDLSGATGIIWLEDTTDG*RGGART
Trigger: TGTGCGTGCCCCTCCCCTGCAGCCGTCGGTGGTATC...TTCTAGCCAGATGATGCCTGTGGCCCCAGAGAGGTCCCCTGAGGTTGGGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCCACGTGGACAGACAATaGTCAGAAGGTGGCGAAGGG +
Preference number: 4 (lower is better)
Translates to: NSQGTRFPVGSGRGFGPSHVDRQ*SEGGEG
Trigger: CCCTTCGCCACCTTCTGAGCATTGTCTGTCCACGTG...GGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGTGTCCTCTCCGGAGCTaGCCATGTCGCCGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: AECVSISPGTRMDLPREGCPLRS*PCRRRV
Trigger: GACCCGCCGGCGACATGGCCAGCTCCGGAGAGGACA...CCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CCA 90 bp GCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCCAACGGGGCTCACGTCGATaGCCAGCGAGCGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ALLVGLKSHRRGSNQQSQRGSRR*PASAGA
Trigger: AGCACCTGCGCTCGCTGGCCATCGACGTGAGCCCCG...TTGGGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCGGGGCTCACGTCGATaGCCAGCGAGCGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRGSRR*PASAGA
Trigger: AGCACCTGCGCTCGCTGGCCATCGACGTGAGCCCCG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCGCTGCTCAGCTGGCTaGCGTCGAAGCCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRCSAG*RRSRGS
Trigger: TGAGCCCCGGCTTCGACGCCAGCCAGCTGAGCAGCG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCACTCGCTGCTCAGCTaGCTGGCGTCGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACHSLLS*LASKPG
Trigger: CCCCGGCTTCGACGCCAGCCAGCTGAGCAGCGAGTG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCCCTCCGAGCTGTGGTaGTGGGCGGCCGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNPSELW*WAAERF
Trigger: GAACCTCTCGGCCGCCCACCACCACAGCTCGGAGGG...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCCCTCCGAGCTGTGGTaGTGGGCGGCCGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACPSELW*WAAERF
Trigger: GAACCTCTCGGCCGCCCACCACCACAGCTCGGAGGG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTAGGAGCTGGCAGAGGTaGCGGCCCAGGCCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSRSWQR*RPRPSE
Trigger: CTCGGAGGGCCTGGGCCGCCACCTCTGCCAGCTCCT...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGGCCCGAGAAGGGGCTaGGACAGGACTGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACGPRRG*DRTARP
Trigger: TGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGCTAACACGGAGGAGGGCTaGGGGCACGCCTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: AECVSISPGTRMDLPREANTEEG*GHAWPE
Trigger: CTCGGGCCAGGCGTGCCCCCAGCCCTCCTCCGTGTT...AGCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGGAGCGAGTTGCGGATaGCGGGCTCGTTGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACGASCG*RARCGA
Trigger: TGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTGCGCGGCTGCAGGGTaGGAGCGAGTTGCGGATGGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACCAAAG*ERVADG
Trigger: GCCATCCGCAACTCGCTCCCACCCTGCAGCCGCGCA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CGGGCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCCCATCATGCCCAGGTTaGCCAGCGACAGGGACCGCA +
Preference number: 4 (lower is better)
Translates to: RALLVGLKSHRRGSNQQSPSCPG*PATGTA
Trigger: TGCGGTCCCTGTCGCTGGCCAACCTGGGCATGATGG...GGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp GCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCCAAAGCACGGCATCGGGCTaGAGGGTGCCGCTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: ALLVGLKSHRRGSNQQSQSTASG*RVPLRE
Trigger: CTCTCGCAGCGGCACCCTCCAGCCCGATGCCGTGCT...TTGGGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAGCACGGCATCGGGCTaGAGGGTGCCGCTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACSTASG*RVPLRE
Trigger: CTCTCGCAGCGGCACCCTCCAGCCCGATGCCGTGCT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp ATGTCGTGTCATTTAGCACCTGGTCATGAGATACGGCGAGACCCCCAGGTCCAGCAGGTGGGGCGTGGCTaGCCGGGAGAGAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: MSCHLAPGHEIRRDPQVQQVGRG*PGERPP
Trigger: AGGGGGCCTCTCTCCCGGCCAGCCACGCCCCACCTG...CTGGACCTGGGGGTCTCGCCGTATCTCATGACCAGGTGCTAAATGACACGACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGACACATCAGCACAGCGGTCCAGGCTCTGGCTCACTCCCCGGGAGGCTTCTGTACCAGCCCGGCCGACTaGACTTCAGGGGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: RHISTAVQALAHSPGGFCTSPAD*TSGGQH
Trigger: ATGCTGTCCCCCTGAAGTCCAGTCGGCCGGGCTGGT...ACAGAAGCCTCCCGGGGAGTGAGCCAGAGCCTGGACCGCTGTGCTGATGTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GAAGGCGGGCTGGACAAGGGGCCCTTCACCAAGAGCGGCCAGGGCGGCGGTCCACCCCAGAGACATGAGTaGGCTCAAGTGTGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: EGGLDKGPFTKSGQGGGPPQRHE*AQVCPN
Trigger: ATTAGGACACACTTGAGCCCACTCATGTCTCTGGGG...TGGACCGCCGCCCTGGCCGCTCTTGGTGAAGGGCCCCTTGTCCAGCCCGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCCAGATCCACCTGTGCCAGTGAGCAGAGGCGCCAGGGTGGGGTCAAGACTGCCTCGGAGAGCAAGAAGTaGTCAGTCCCAGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: PRSTCASEQRRQGGVKTASESKK*SVPGGT
Trigger: GGTGCCTCCTGGGACTGACCACTTCTTGCTCTCCGA...GGCAGTCTTGACCCCACCCTGGCGCCTCTGCTCACTGGCACAGGTGGATCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCTTCACCAAGAGCGGCCAGGGCGGCGGTCCAGGCTAGCAGGGCCCAACTACAGCAGAGTGGAGGGCAATaGTGCGATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PSPRAARAAVQASRAQLQQSGGQ*CDLGSL
Trigger: CAGTGAGCCAAGATCGCACCATTGCCCTCCACTCTG...CTGTAGTTGGGCCCTGCTAGCCTGGACCGCCGCCCTGGCCGCTCTTGGTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CTCAGAAGGTGGCGAAGGGGCTGGAGGGAGATACCACCGACGGCTGCAGGGGAGCAGGGTATTGCTCCGTaGCCCAGAGTGGAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: LRRWRRGWREIPPTAAGEQGIAP*PRVEGN
Trigger: ATTGCCCTCCACTCTGGGCCACGGAGCAATACCCTG...CTCCCCTGCAGCCGTCGGTGGTATCTCCCTCCAGCCCCTTCGCCACCTTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp ACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAAGGTGGCGAAGGGGCTaGAGGGAGATACCACCGACG +
Preference number: 4 (lower is better)
Translates to: TSQSNSPHERAVETPGAPRWRRG*REIPPT
Trigger: CGTCGGTGGTATCTCCCTCCAGCCCCTTCGCCACCT...TGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GACCTTCCCAGGGAAGGGCAGGTTCTTCAGCAGAGACCAGAACACGGAGGAGGGCCCCAGGAACGCGCATaGACCTTCCCAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: DLPREGQVLQQRPEHGGGPQERA*TFPGKG
Trigger: GCCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGG...CCCTCCTCCGTGTTCTGGTCTCTGCTGAAGAACCTGCCCTTCCCTGGGAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR TCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCAGAGGCGCAGGGAAGTaGGGTGGCAGCCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTRGAGK*GGSPRG
Trigger: ACCTCTCGGGCTGCCACCTCACTTCCCTGCGCCTCT...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCAGTGGACGCAGCCGCTaGGGTTCAAGCTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTSGRSR*GSSWPG
Trigger: GCCTGGCCAGCTTGAACCTCAGCGGCTGCGTCCACT...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAGTGGACGCAGCCGCTaGGGTTCAAGCTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACSGRSR*GSSWPG
Trigger: GCCTGGCCAGCTTGAACCTCAGCGGCTGCGTCCACT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp GGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGTACTGGGCGTTGGCGCTaGAGTAGGGCTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GMESPKSAATKLAGPSPCTGRWR*SRAAPA
Trigger: GGCTGGAGCAGCCCTACTTCAGCGCCAACGCCCAGT...ACATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCACTGGGCGTTGGCGCTaGAGTAGGGCTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACTGRWR*SRAAPA
Trigger: GGCTGGAGCAGCCCTACTTCAGCGCCAACGCCCAGT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp CGGGCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCGCCCCCTTCCTCTTGTaGCAAACCAAGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: RALLVGLKSHRRGSNQQSAPFLL*QTKGPW
Trigger: CCAGGGACCCTTGGTTTGTCACAAGAGGAAGGGGGC...GGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp GGCGTGGCTGGCCGGGAGAGAGGCCCCCTTCCTCTTGTGACAAACCAAGGGTCCAAAGCCCCAGAGACATaGGTGGGCTCAAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GVAGRERGPLPLVTNQGSKAPET*VGSSVS
Trigger: GGACACACTTGAGCCCACTCATGTCTCTGGGGCTTT...GGACCCTTGGTTTGTCACAAGAGGAAGGGGGCCTCTCTCCCGGCCAGCCACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGGAAAAACCGCTTGCTCATaGGAACAGGACACCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SIPAGALLAPPRPEHWSGKTACS*EQDTQA
Trigger: CGCCTGGGTGTCCTGTTCTCATGAGCAAGCGGTTTT...TCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp TGTGGCCGCCCATCCACGGGGCCCCGGTGGCAGGTGACCACAAACACAACAGCCCACACACGGAAGACGTaGCTCACACACACATGCACA +
Preference number: 4 (lower is better)
Translates to: CGRPSTGPRWQVTTNTTAHTRKT*LTHTCT
Trigger: TGTGCATGTGTGTGTGAGTCACGTCTTCCGTGTGTG...GGCTGTTGTGTTTGTGGTCACCTGCCACCGGGGCCCCGTGGATGGGCGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp TGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGCAGGTTGAGGTGGACCCCGTCTaGCATCCCGGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CVSISPGTRMDLPREGQVEVDPV*HPGCCR
Trigger: CCTGCAGCAGCCGGGATGGCAGACGGGGTCCACCTC...AACCTGCCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTGCCAGCGAGCGCAGGTaGTGCAGGGCCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSASERR*CRAESI
Trigger: GATGCTCTCGGCCCTGCAGCACCTGCGCTCGCTGGC...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACGGCTCAGGGTGGCCTTaGACTCGCTGCTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNGSGWP*TRCSAG
Trigger: GCCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCC...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGGCTCAGGGTGGCCTTaGACTCGCTGCTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACGSGWP*TRCSAG
Trigger: GCCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GTGACCACAAACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGCTTCTCTAGGCTGGTaGAGCAGGGCACCACGCCGT +
Preference number: 4 (lower is better)
Translates to: VTTNTTAKGHASRSEVAGASLGW*SRAPRR
Trigger: ACGGCGTGGTGCCCTGCTGCACCAGCCTAGAGAAGC...CCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTTTGTGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCTGGCGCCCTCGCGCGTaGGGTCCAGAATCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCWRPRA*GPESRS
Trigger: ACTTCGAGATTCTGGACCGCACGCGCGAGGGCGCCA...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTGTCGTCCTCCGCCTTaGGGAGCAGCGAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACCRPPP*GAASLG
Trigger: CCCCAGACTCGCTGCTCCGCAAGGCGGAGGACGACA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTGGATGGCGGGCTCGTTaGGGGGCATGGCGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLGWRAR*GAWRRR
Trigger: TCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCC...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCACTCTGTGCGCGGCTaGAGGGTGGGAGCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNHSVRG*RVGASC
Trigger: GCAACTCGCTCCCACCCTGCAGCCGCGCACAGAGTG...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCACTCTGTGCGCGGCTaGAGGGTGGGAGCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACHSVRG*RVGASC
Trigger: GCAACTCGCTCCCACCCTGCAGCCGCGCACAGAGTG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTGTCCCCGACACTCTGTaGGCGGCTGCAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLVPDTL*AAAGWE
Trigger: CTCCCACCCTGCAGCCGCGCACAGAGTGTCGGGGAC...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTGTGCGAGCGTCAGGTaGCGCAGGAAGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACCASVR*RRKASW
Trigger: CCAGCTGGCCTTCCTGCGGCACCTGACGCTCGCACA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTGACGCTGGGCAGCTGTaGGAGCGTCAGGTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSDAGQL*ERQVPQ
Trigger: CTGCGGCACCTGACGCTCGCACAGCTGCCCAGCGTC...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp AGAAGCGGCCACCGTGGCACATGGGGTGAGGACTCAGATGCCAGGAGGATGTCCGACAGGGACCGCAACTaGTGGCACTGCAGGCCGATA +
Preference number: 4 (lower is better)
Translates to: RSGHRGTWGEDSDARRMSDRDRN*WHCRPI
Trigger: TATCGGCCTGCAGTGCCAGCAGTTGCGGTCCCTGTC...GGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTCATCGGGCTGGAGGGTaGCGCTGCGAGAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSHRAGG*RCERPG
Trigger: GCCTGGTCTCTCGCAGCGGCACCCTCCAGCCCGATG...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GTGACCACAAACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGACTGCTGCAGGCTCTTaGAGGTGGCGAGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: VTTNTTAKGHASRSEVAGTAAGS*RWRGTP
Trigger: GGGAGTCCCTCGCCACCTGCAAGAGCCTGCAGCAGT...CCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTTTGTGGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCACTGCTGCAGGCTCTTaGAGGTGGCGAGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCTAAGS*RWRGTP
Trigger: GGGAGTCCCTCGCCACCTGCAAGAGCCTGCAGCAGT...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GTGACCACAAACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGCGGAGAAGCGACTGCTaGAGGCTCTTGCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VTTNTTAKGHASRSEVAGRRSDC*RLLQVA
Trigger: CGCCACCTGCAAGAGCCTGCAGCAGTCGCTTCTCCG...CCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTTTGTGGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp ACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCACTGCGGAGAAGCGACTaGTGCAGGCTCTTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TSQSNSPHERAVETPGAPLRRSD*CRLLQV
Trigger: CACCTGCAAGAGCCTGCAGCAGTCGCTTCTCCGCAG...TGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp GTGACTGAGACCGATGGGCGGCGGCTCCGCCTCTCACCACCACAGGTTCGGCGGTTCAAACGATTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: VTETDGRRLRLSPPQVRRFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAATCGTTTGAA...CCGCCGAACCTGTGGTGGTGAGAGGCGGAGCCGCCGCCCATCGGTCTCAGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620087.1
CDS-3UTR GCA 90 bp CACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGCACTGCGTGCATGGCCGGTTGTCCAGGCTGGAGTaGAATGGTGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: HAHTHFLAKAARHCVHGRLSRLE*NGVISA
Trigger: AGCCGAGATCACACCATTGCACTCCAGCCTGGACAA...CCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp ACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCACTGCTGGAATCAGCCTaGAGAAGGGTCCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: TSQSNSPHERAVETPGAPLLESA*RRVPLA
Trigger: GGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAG...TGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GGGCCTAGGGGTGTGGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTGGTACACACGCTAGGATaGATTCCTGGAGCAGACGCA +
Preference number: 4 (lower is better)
Translates to: GPRGVALTGHDRRARRPLVHTLG*IPGADA
Trigger: TGCGTCTGCTCCAGGAATGCATCCTAGCGTGTGTAC...CAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCCTAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp ACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCGCATGCAGGCACATGTaGACACACAGGGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: TQQPRDTLPGRKWQGVRAACRHM*THRAQV
Trigger: TACCTGTGCCCTGTGTGTGCACATGTGCCTGCATGC...GGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCAAGAGCCCGCCCCCTCTaGTGCAGAAGGAAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: NGMESPKSAATKLAGPSPRARPL*CRRKRP
Trigger: GGGCCGCTTCCTTCTGCAGCAGAGGGGGCGGGCTCT...TGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GGCGTGGCTGGCCGGGAGAGAGGCCCCCTTCCTCTTGTGACAAACCAAGGGTCCGCGATCTTGGCTCACTaGAACATCCAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GVAGRERGPLPLVTNQGSAILAH*NIQLLG
Trigger: GCCCAGGAGTTGGATGTTGCAGTGAGCCAAGATCGC...GGACCCTTGGTTTGTCACAAGAGGAAGGGGGCCTCTCTCCCGGCCAGCCACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CTCAGAAGGTGGCGAAGGGGCTGGAGGGAGATACCACCGACGGCTGCAGGGGAGAACCACGTGGAGCTCTaGTGTCTCTGGGCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LRRWRRGWREIPPTAAGENHVEL*CLWAVS
Trigger: TGAGACTGCCCAGAGACAGCAGAGCTCCACGTGGTT...CTCCCCTGCAGCCGTCGGTGGTATCTCCCTCCAGCCCCTTCGCCACCTTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGTCCTCTCCGGAGCTaGCCATGTCGCCGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSCPLRS*PCRRRV
Trigger: GACCCGCCGGCGACATGGCCAGCTCCGGAGAGGACA...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCCGCAGGGAAGTGAGGTaGCAGCCCGAGAGGTTCACC +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCRREVR*QPERFT
Trigger: GGTGAACCTCTCGGGCTGCCACCTCACTTCCCTGCG...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp GACCTTCCCAGGGAAGGGCAGGTTCTTCAGCAGAGACCAGAACACGGAGGAGGGCGCAGGGAAGTGAGGTaGCAGCCCGAGAGGTTCACC +
Preference number: 4 (lower is better)
Translates to: DLPREGQVLQQRPEHGGGRREVR*QPERFT
Trigger: GGTGAACCTCTCGGGCTGCCACCTCACTTCCCTGCG...CCCTCCTCCGTGTTCTGGTCTCTGCTGAAGAACCTGCCCTTCCCTGGGAAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCGGGGCTCACGTCGATaGCCAGCGAGCGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLRGSRR*PASAGA
Trigger: AGCACCTGCGCTCGCTGGCCATCGACGTGAGCCCCG...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp AATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCACACTCGCTGCTCAGCTaGCTGGCGTCGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: NGMESPKSAATKLAGPSPHSLLS*LASKPG
Trigger: CCCCGGCTTCGACGCCAGCCAGCTGAGCAGCGAGTG...TGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCACTCGCTGCTCAGCTaGCTGGCGTCGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLHSLLS*LASKPG
Trigger: CCCCGGCTTCGACGCCAGCCAGCTGAGCAGCGAGTG...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGCACGCGGCTCAGGGTaGCCTTGCACTCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACARGSG*PCTRCS
Trigger: TGAGCAGCGAGTGCAAGGCCACCCTGAGCCGCGTGC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCTGGCCCACCATAAGCTaGCCCGAGAGGATGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTWPTIS*PERMAP
Trigger: GGGCGCCATCCTCTCGGGCCAGCTTATGGTGGGCCA...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTGGCCCACCATAAGCTaGCCCGAGAGGATGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACWPTIS*PERMAP
Trigger: GGGCGCCATCCTCTCGGGCCAGCTTATGGTGGGCCA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCTGCGGCACGTTGCTCTaGCCCACCATAAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCCGTLL*PTISWP
Trigger: GGGCCAGCTTATGGTGGGCCAGAGCAACGTGCCGCA...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGCCAGGAGGTTCTTGGTaGCGCCGCTCTCCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: AECVSISPGTRMDLPREGPGGSW*RRSPRS
Trigger: GCTTCGCGGAGAGCGGCGCCACCAAGAACCTCCTGG...CCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCCAGGAGGTTCTTGGTaGCGCCGCTCTCCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACPGGSW*RRSPRS
Trigger: GCTTCGCGGAGAGCGGCGCCACCAAGAACCTCCTGG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCAGTCCAGGAGGTTCTTaGTGGCGCCGCTCTCCGCGA +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCSPGGS*WRRSPR
Trigger: TCGCGGAGAGCGGCGCCACCAAGAACCTCCTGGACT...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp GACCTTCCCAGGGAAGGGCAGGTTCTTCAGCAGAGACCAGAACACGGAGGAGGGAGTCCAGGAGGTTCTTaGTGGCGCCGCTCTCCGCGA +
Preference number: 4 (lower is better)
Translates to: DLPREGQVLQQRPEHGGGSPGGS*WRRSPR
Trigger: TCGCGGAGAGCGGCGCCACCAAGAACCTCCTGGACT...CCCTCCTCCGTGTTCTGGTCTCTGCTGAAGAACCTGCCCTTCCCTGGGAAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CCA 90 bp GTCCCACCATCGGGCACTGCTGGAATCAGCCTGCAGAAGGGTCCCTCTGGCCAGCGACATTGCGCGCCATaGAGTCCAGGAGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VPPSGTAGISLQKGPSGQRHCAP*SPGGSW
Trigger: CCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCG...CTGGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GTCCCACCATCGGGCACTGCTGGAATCAGCCTGCAGAAGGGTCCCTCTGGCCAGCCGTTGATGACCTGCTaGATCAGATGGCCGCCTGAC +
Preference number: 4 (lower is better)
Translates to: VPPSGTAGISLQKGPSGQPLMTC*IRWPPD
Trigger: GTCAGGCGGCCATCTGATCCAGCAGGTCATCAACGG...CTGGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGCGGAGCAGCGAGTCTaGGGACAGGCAGTGGACGCA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACAEQRV*GQAVDA
Trigger: TGCGTCCACTGCCTGTCCCCAGACTCGCTGCTCCGC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTCCGAGCTGTGGTGGTaGGCGGCCGAGAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACSELWW*AAERFR
Trigger: CCTGAACCTCTCGGCCGCCCACCACCACAGCTCGGA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTGGCCCGAGAAGGGGCTaGGACAGGACTGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLGPRRG*DRTARP
Trigger: TGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCC...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp GTCCCACCATCGGGCACTGCTGGAATCAGCCTGCAGAAGGGTCCCTCTGGCCAGAGGGACCGCAACTGCTaGCACTGCAGGCCGATATTG +
Preference number: 4 (lower is better)
Translates to: VPPSGTAGISLQKGPSGQRDRNC*HCRPIL
Trigger: CAATATCGGCCTGCAGTGCCAGCAGTTGCGGTCCCT...CTGGCCAGAGGGACCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGTGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GTGACCACAAACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGCCACCGTGGCACATaGGGTGAGGACTCAGATGCC +
Preference number: 4 (lower is better)
Translates to: VTTNTTAKGHASRSEVAGGHRGT*GEDSDA
Trigger: GGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCC...CCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTTTGTGGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GCAGTCCCAACCTCAGGGGACCTCTCTGGGGCCACAGGCATCATCTGGCTAGAAGCAAAGGTTCTGCACTaGGTGCAGCCTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AVPTSGDLSGATGIIWLEAKVLH*VQPGAG
Trigger: CCCAGCCCCAGGCTGCACCCAGTGCAGAACCTTTGC...TTCTAGCCAGATGATGCCTGTGGCCCCAGAGAGGTCCCCTGAGGTTGGGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GCAGTCCCAACCTCAGGGGACCTCTCTGGGGCCACAGGCATCATCTGGCTAGAAGGCGAAGGCTTGGTCTaGTGTGGGTCCCACCATCGG +
Preference number: 4 (lower is better)
Translates to: AVPTSGDLSGATGIIWLEGEGLV*CGSHHR
Trigger: CCGATGGTGGGACCCACACCAGACCAAGCCTTCGCC...TTCTAGCCAGATGATGCCTGTGGCCCCAGAGAGGTCCCCTGAGGTTGGGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCGATCGCCGCGCCTGGTaGTCTCCAGGTGCCATTTTA +
Preference number: 4 (lower is better)
Translates to: NTTAKGHASRSEVAGGSGDRRAW*SPGAIL
Trigger: TAAAATGGCACCTGGAGACCACCAGGCGCGGCGATC...GCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GGCGTGGCTGGCCGGGAGAGAGGCCCCCTTCCTCTTGTGACAAACCAAGGGTCCCCAGGTCCACTGATCTaGGGTAGGAGTAGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: GVAGRERGPLPLVTNQGSPGPLI*GRSSQV
Trigger: CACTTGGCTACTCCTACCCCAGATCAGTGGACCTGG...GGACCCTTGGTTTGTCACAAGAGGAAGGGGGCCTCTCTCCCGGCCAGCCACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCCAGATCCACCTGTGCCAGTGAGCAGAGGCGCCAGGGTGGGGTCAAGACTGCCCCCCTTAAAACCACGTaGAGCTCTGCTGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PRSTCASEQRRQGGVKTAPLKTT*SSAVSG
Trigger: CCCAGAGACAGCAGAGCTCCACGTGGTTTTAAGGGG...GGCAGTCTTGACCCCACCCTGGCGCCTCTGCTCACTGGCACAGGTGGATCTGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAACCCCAGCTCTGCTaGGGGCTCCTCAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLQPQLC*GLLSGC
Trigger: GCAGCCGCTGAGGAGCCCCCAGCAGAGCTGGGGTTG...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGTTGTCGGCGCCCAGTaGCTCGAGACGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACVVGAQ*LETSWL
Trigger: CAGCCAGGACGTCTCGAGCCACTGGGCGCCGACAAC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp GTGACCACAAACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGAGCAGAGGGAAGATaGCGACGTTTAACGCGGGCC +
Preference number: 4 (lower is better)
Translates to: VTTNTTAKGHASRSEVAGGAEGR*RRLTRA
Trigger: GGCCCGCGTTAAACGTCGTCATCTTCCCTCTGCTCC...CCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTTTGTGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp CCCTTCCCCATGTCACACTTGACCATGCAAGGGGACACTCAGATACACGGTGACCCTTCCCAGGGAAGCTaGAGGCCGTGGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PFPMSHLTMQGDTQIHGDPSQGS*RPWGGW
Trigger: CCACCCACCCCACGGCCTTCAGCTTCCCTGGGAAGG...GTCACCGTGTATCTGAGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp CCCTTCCCCATGTCACACTTGACCATGCAAGGGGACACTCAGATACACGGTGACGGCTCTCACAGGCCATaGCAGGAGGGCCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PFPMSHLTMQGDTQIHGDGSHRP*QEGQEA
Trigger: GGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCC...GTCACCGTGTATCTGAGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGCTCACGGGGACAAGTGCTaGCCACGCTCCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AECVSISPGTRMDLPREAHGDKC*PRSSSR
Trigger: CCTGCTGGAGGAGCGTGGTCAGCACTTGTCCCCGTG...AGCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp GCCAAGTGTTCTGACAGGCGGTTTTCCCGTAAACCGACCCCTTCAGCGTTTCTGCCGAGTGTTGCCTGGTaGCGTGGAGCAGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: AKCSDRRFSRKPTPSAFLPSVAW*RGAGGG
Trigger: CCCGCCTCCTGCTCCACGTCACCAGGCAACACTCGG...CAGAAACGCTGAAGGGGTCGGTTTACGGGAAAACCGCCTGTCAGAACACTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp ATGTCGTGTCATTTAGCACCTGGTCATGAGATACGGCGAGACCCCCAGGTCCAGGACCCAGGGTGTGGTTaGGGGAGGGCGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: MSCHLAPGHEIRRDPQVQDPGCG*GRALLS
Trigger: GCTCAGCAGCGCCCTCCCTCAACCACACCCTGGGTC...CTGGACCTGGGGGTCTCGCCGTATCTCATGACCAGGTGCTAAATGACACGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp AGACACATCAGCACAGCGGTCCAGGCTCTGGCTCACTCCCCGGGAGGCTTCTGTAGTTCAAGGCCAGCCTaGCCAACATGGTGCAACCCC +
Preference number: 4 (lower is better)
Translates to: RHISTAVQALAHSPGGFCSSRPA*PTWCNP
Trigger: GGGGTTGCACCATGTTGGTCAGGCTGGCCTTGAACT...ACAGAAGCCTCCCGGGGAGTGAGCCAGAGCCTGGACCGCTGTGCTGATGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCAGCCACTCACAGGTGTaGGCCACCACGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTSHSQV*ATTPSR
Trigger: TCTGCTGGGCGTGGTGGCTCACACCTGTGAGTGGCT...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCTCACCTTCACCAGGCTaGGGCAGCGGGCCACGTGTT +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTSPSPG*GSGPRV
Trigger: AACACGTGGCCCGCTGCCGCAGCCTGGTGAAGGTGA...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGTCACCTTCACCAGGCTaGGGCAGCGGGCCACGTGTT +
Preference number: 4 (lower is better)
Translates to: AECVSISPGTRMDLPREGSPSPG*GSGPRV
Trigger: AACACGTGGCCCGCTGCCGCAGCCTGGTGAAGGTGA...CCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCAGCGAGCGCAGGTGCTaGAGGGCCGAGAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTSERRC*RAESIL
Trigger: CAAGATGCTCTCGGCCCTGCAGCACCTGCGCTCGCT...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAGCGAGCGCAGGTGCTaGAGGGCCGAGAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACSERRC*RAESIL
Trigger: CAAGATGCTCTCGGCCCTGCAGCACCTGCGCTCGCT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTGGCCTTGCACTCGCTaGTCAGCTGGCTGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACWPCTR*SAGWRR
Trigger: TCGACGCCAGCCAGCTGAGCAGCGAGTGCAAGGCCA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGGAGTGAACAGCGTCTaGTTGAGCTCCCGCACGCGG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACGVNSV*LSSRTR
Trigger: CCGCGTGCGGGAGCTCAAGCAGACGCTGTTCACTCC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACGCTTCTCTAGGCTGGTaGAGCAGGGCACCACGCCGT +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNASLGW*SRAPRR
Trigger: ACGGCGTGGTGCCCTGCTGCACCAGCCTAGAGAAGC...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGCTTCTCTAGGCTGGTaGAGCAGGGCACCACGCCGT +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACASLGW*SRAPRR
Trigger: ACGGCGTGGTGCCCTGCTGCACCAGCCTAGAGAAGC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGTGGCGCCCTCGCGCGTaGGGTCCAGAATCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: AECVSISPGTRMDLPREGWRPRA*GPESRS
Trigger: ACTTCGAGATTCTGGACCGCACGCGCGAGGGCGCCA...CCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTGGCGCCCTCGCGCGTaGGGTCCAGAATCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACWRPRA*GPESRS
Trigger: ACTTCGAGATTCTGGACCGCACGCGCGAGGGCGCCA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp AGACACATCAGCACAGCGGTCCAGGCTCTGGCTCACTCCCCGGGAGGCTTCTGTCATCCAGCACGACATTaGGCGCCATGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RHISTAVQALAHSPGGFCHPARH*APWSPG
Trigger: TCCTGGACTCCATGGCGCGCAATGTCGTGCTGGATG...ACAGAAGCCTCCCGGGGAGTGAGCCAGAGCCTGGACCGCTGTGCTGATGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GGCACGCCTGGCCCGAGAAGGGGCTGGGACAGGACTGCACGCCCACACGCACTTTTGAATTTCATGTGCTaGAGGAGGGAAGAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: GTPGPRRGWDRTARPHALLNFMC*RREEPF
Trigger: GAACGGCTCTTCCCTCCTGCAGCACATGAAATTCAA...AAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCCAGGCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp GCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCCAATCAGGTGGCGCAGGTTaGAGCAGGACGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: ALLVGLKSHRRGSNQQSQSGGAG*SRTPPE
Trigger: CTCTGGTGGCGTCCTGCTGCAACCTGCGCCACCTGA...TTGGGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTCAGGTGGCGCAGGTTaGAGCAGGACGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACSGGAG*SRTPPE
Trigger: CTCTGGTGGCGTCCTGCTGCAACCTGCGCCACCTGA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp ATGTCACCCAGAACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCAAAAGCCGCGCGGCACTaGGTGCATGGCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: MSPRTHPLDLNFTEQQSPKAARH*VHGRLG
Trigger: GCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTT...TGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTTCTGGGTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGGGCTGGGACAGGACTaGACGCCCACACGCACTTTC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACGLGQD*TPTRTF
Trigger: GAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CCCTTCCCCATGTCACACTTGACCATGCAAGGGGACACTCAGATACACGGTGACGCTGGAGGGTGCCGCTaGGAGAGACCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: PFPMSHLTMQGDTQIHGDAGGCR*ERPGTG
Trigger: GCCTGTGCCTGGTCTCTCGCAGCGGCACCCTCCAGC...GTCACCGTGTATCTGAGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCACTGCTGCAGGCTCTTaGAGGTGGCGAGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACTAAGS*RWRGTP
Trigger: GGGAGTCCCTCGCCACCTGCAAGAGCCTGCAGCAGT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCGGAGAAGCGACTGCTaGAGGCTCTTGCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRRSDC*RLLQVA
Trigger: CGCCACCTGCAAGAGCCTGCAGCAGTCGCTTCTCCG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCCAAAGGTTCTGCACTGGGTaGAGCCTGGGGCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ALLVGLKSHRRGSNQQSQRFCTG*SLGLGE
Trigger: CTCTCCCAGCCCCAGGCTGCACCCAGTGCAGAACCT...TTGGGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CTCCAGGCCCGTGGACAGGGCCCCCAGGGATTGCGGCTCAGTATACAAACCCCCCCAGAAAGGCAGCTTTaGTCTGGGTCATCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LQARGQGPQGLRLSIQTPPERQL*SGSSGS
Trigger: TGAGCCTGATGACCCAGAGCAAAGCTGCCTTTCTGG...GGGGGTTTGTATACTGAGCCGCAATCCCTGGGGGCCCTGTCCACGGGCCTGGAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GCAGTCCCAACCTCAGGGGACCTCTCTGGGGCCACAGGCATCATCTGGCTAGAAGGCCGACGTCTCCTCTaGCTTTGGTTTAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: AVPTSGDLSGATGIIWLEGRRLL*LWFSGP
Trigger: GGGGCCACTAAACCAAAGGCAGAGGAGACGTCGGCC...TTCTAGCCAGATGATGCCTGTGGCCCCAGAGAGGTCCCCTGAGGTTGGGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GCCAAGTGTTCTGACAGGCGGTTTTCCCGTAAACCGACCCCTTCAGCGTTTCTGTGTCCTCTCCGGAGCTaGCCATGTCGCCGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: AKCSDRRFSRKPTPSAFLCPLRS*PCRRRV
Trigger: GACCCGCCGGCGACATGGCCAGCTCCGGAGAGGACA...CAGAAACGCTGAAGGGGTCGGTTTACGGGAAAACCGCCTGTCAGAACACTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGCACTGCGTGCATGGCCGGGAATCAGATCTGTGCTaGGGACGTGACTCAGGATGT +
Preference number: 4 (lower is better)
Translates to: HAHTHFLAKAARHCVHGRESDLC*GRDSGC
Trigger: ACATCCTGAGTCACGTCCCCAGCACAGATCTGATTC...CCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCGCCATGCTCAGCTGCTaGATCTCCCGGCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTAMLSC*ISRPIS
Trigger: GGAGATCGGCCGGGAGATCCAGCAGCTGAGCATGGC...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCGCAGGGAAGTGAGGTaGCAGCCCGAGAGGTTCACC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRREVR*QPERFT
Trigger: GGTGAACCTCTCGGGCTGCCACCTCACTTCCCTGCG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTGCACGCGGCTCAGGGTaGCCTTGCACTCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSARGSG*PCTRCS
Trigger: TGAGCAGCGAGTGCAAGGCCACCCTGAGCCGCGTGC...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp TGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGCAGGTTGCACGCGGCTCAGGGTaGCCTTGCACTCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CVSISPGTRMDLPREGQVARGSG*PCTRCS
Trigger: TGAGCAGCGAGTGCAAGGCCACCCTGAGCCGCGTGC...AACCTGCCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGCAGCTTCTCTAGGCTaGTGCAGCAGGGCACCACGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACAASLG*CSRAPR
Trigger: GCGTGGTGCCCTGCTGCACCAGCCTAGAGAAGCTGC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp AATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGGCCCACCATAAGCTaGCCCGAGAGGATGGCGCCC +
Preference number: 4 (lower is better)
Translates to: NGMESPKSAATKLAGPSPWPTIS*PERMAP
Trigger: GGGCGCCATCCTCTCGGGCCAGCTTATGGTGGGCCA...TGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTGCGGCACGTTGCTCTaGCCCACCATAAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACCGTLL*PTISWP
Trigger: GGGCCAGCTTATGGTGGGCCAGAGCAACGTGCCGCA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTCCAGGAGGTTCTTGGTaGCGCCGCTCTCCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSPGGSW*RRSPRS
Trigger: GCTTCGCGGAGAGCGGCGCCACCAAGAACCTCCTGG...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAGTCCAGGAGGTTCTTaGTGGCGCCGCTCTCCGCGA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACSPGGS*WRRSPR
Trigger: TCGCGGAGAGCGGCGCCACCAAGAACCTCCTGGACT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACTCTGGGGACAGGCAGTaGACGCAGCCGCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNSGDRQ*TQPLRF
Trigger: GAACCTCAGCGGCTGCGTCCACTGCCTGTCCCCAGA...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTCTGGGGACAGGCAGTaGACGCAGCCGCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACSGDRQ*TQPLRF
Trigger: GAACCTCAGCGGCTGCGTCCACTGCCTGTCCCCAGA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTGCGGAGCAGCGAGTCTaGGGACAGGCAGTGGACGCA +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSAEQRV*GQAVDA
Trigger: TGCGTCCACTGCCTGTCCCCAGACTCGCTGCTCCGC...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp GCCAAGTGTTCTGACAGGCGGTTTTCCCGTAAACCGACCCCTTCAGCGTTTCTGCCCTCCGAGCTGTGGTaGTGGGCGGCCGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: AKCSDRRFSRKPTPSAFLPSELW*WAAERF
Trigger: GAACCTCTCGGCCGCCCACCACCACAGCTCGGAGGG...CAGAAACGCTGAAGGGGTCGGTTTACGGGAAAACCGCCTGTCAGAACACTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCCTTCCCCATGTCACACTTGACCATGCAAGGGGACACTCAGATACACGGTGACTGCGCGGCTGCAGGGTaGGAGCGAGTTGCGGATGGC +
Preference number: 4 (lower is better)
Translates to: PFPMSHLTMQGDTQIHGDCAAAG*ERVADG
Trigger: GCCATCCGCAACTCGCTCCCACCCTGCAGCCGCGCA...GTCACCGTGTATCTGAGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCCCATCATGCCCAGGTTaGCCAGCGACAGGGACCGCA +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTPSCPG*PATGTA
Trigger: TGCGGTCCCTGTCGCTGGCCAACCTGGGCATGATGG...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCCATCATGCCCAGGTTaGCCAGCGACAGGGACCGCA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACPSCPG*PATGTA
Trigger: TGCGGTCCCTGTCGCTGGCCAACCTGGGCATGATGG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCCACTGGCTCAGCGCCTaGAAGAACTGGGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTHWLSA*KNWALA
Trigger: CGCCAACGCCCAGTTCTTCCAGGCGCTGAGCCAGTG...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCACTGGCTCAGCGCCTaGAAGAACTGGGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACHWLSA*KNWALA
Trigger: CGCCAACGCCCAGTTCTTCCAGGCGCTGAGCCAGTG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCTGCAGCGAGGGGCACTaGCTCAGCGCCTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTCSEGH*LSAWKN
Trigger: GTTCTTCCAGGCGCTGAGCCAGTGCCCCTCGCTGCA...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTGCAGCGAGGGGCACTaGCTCAGCGCCTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACCSEGH*LSAWKN
Trigger: GTTCTTCCAGGCGCTGAGCCAGTGCCCCTCGCTGCA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp TGTGGCCGCCCATCCACGGGGCCCCGGTGGCAGGTGACCACAAACACAACAGCCTGTGTCCTAATGGGATaGAGAGTCCCAAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CGRPSTGPRWQVTTNTTACVLMG*RVPSLQ
Trigger: CTGCAGACTTGGGACTCTCCATCCCATTAGGACACA...GGCTGTTGTGTTTGTGGTCACCTGCCACCGGGGCCCCGTGGATGGGCGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGGAGCCACAGGCATCATCTaGCTAGAAAAGCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SIPAGALLAPPRPEHWSGATGII*LEKPQR
Trigger: TCTCTGGGGCTTTTCTAGCCAGATGATGCCTGTGGC...TCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGTTGCCTGGTGACGTaGAGCAGGAGGCGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: NGMESPKSAATKLAGPSPCCLVT*SRRRGG
Trigger: TCCGCCCCGCCTCCTGCTCCACGTCACCAGGCAACA...TGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GTGACCACAAACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGCCAGCCCTCAGCTGTTaGAGCCCTACGGCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: VTTNTTAKGHASRSEVAGPALSC*SPTALG
Trigger: ACCTAGAGCCGTAGGGCTCCAACAGCTGAGGGCTGG...CCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTTTGTGGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACAAGGCGTGGAGGTTCTaGGGAGTGCGGTCGCTAAGC +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNKAWRF*GVRSLS
Trigger: GCTTAGCGACCGCACTCCTCAGAACCTCCACGCCTT...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAAGGCGTGGAGGTTCTaGGGAGTGCGGTCGCTAAGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACKAWRF*GVRSLS
Trigger: GCTTAGCGACCGCACTCCTCAGAACCTCCACGCCTT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCTGCCAGGGACGGAGATaGGGAAGGCGTGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTCQGRR*GRRGGS
Trigger: AGAACCTCCACGCCTTCCTCATCTCCGTCCCTGGCA...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTGCCAGGGACGGAGATaGGGAAGGCGTGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACCQGRR*GRRGGS
Trigger: AGAACCTCCACGCCTTCCTCATCTCCGTCCCTGGCA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGATCAGATGGCCGCCTaGCAGGGTACAGCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACDQMAA*QGTAAE
Trigger: TTCAGCCGCTGTACCCTGTCAGGCGGCCATCTGATC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGAGCAACAGTCCCCATaGGAGAGCCGTGGAGACGCC +
Preference number: 4 (lower is better)
Translates to: MGWRVPSLQPLNWQALPHEQQSP*ESRGDA
Trigger: GGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTC...ATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGGAAATCGCTTGAACCTGTaGGGTGGAGGTTGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: SIPAGALLAPPRPEHWSGNRLNL*GGGCSE
Trigger: CTCACTACAACCTCCACCTCACAGGTTCAAGCGATT...TCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp CGGGCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCGGCAGGAGAATCACTTaGGGTCAGGAGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RALLVGLKSHRRGSNQQSGRRIT*GQEFKA
Trigger: GGCCTTGAACTCCTGACCTCAAGTGATTCTCCTGCC...GGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp ATGTCACCCAGAACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCAGAGCAGGCATCACCGTaGGACGCCACGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: MSPRTHPLDLNFTEQQSPEQASP*DATGAG
Trigger: ACCTGCCCCCGTGGCGTCTCACGGTGATGCCTGCTC...TGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTTCTGGGTGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCTGCCATCCCGGCTGCTaGAGGGTGCATGTCATCATC +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCCHPGC*RVHVII
Trigger: GATGATGACATGCACCCTGCAGCAGCCGGGATGGCA...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GACCTTCCCAGGGAAGGGCAGGTTCTTCAGCAGAGACCAGAACACGGAGGAGGGTGCCATCCCGGCTGCTaGAGGGTGCATGTCATCATC +
Preference number: 4 (lower is better)
Translates to: DLPREGQVLQQRPEHGGGCHPGC*RVHVII
Trigger: GATGATGACATGCACCCTGCAGCAGCCGGGATGGCA...CCCTCCTCCGTGTTCTGGTCTCTGCTGAAGAACCTGCCCTTCCCTGGGAAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACGTCTGCCATCCCGGCTaGTGCAGGGTGCATGTCATC +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNVCHPG*CRVHVI
Trigger: GATGACATGCACCCTGCAGCAGCCGGGATGGCAGAC...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GACCTTCCCAGGGAAGGGCAGGTTCTTCAGCAGAGACCAGAACACGGAGGAGGGGTCAAGGCACAGGGCTaGAAGCTTCCGACAGGTACG +
Preference number: 4 (lower is better)
Translates to: DLPREGQVLQQRPEHGGGVKAQG*KLPTGT
Trigger: CGTACCTGTCGGAAGCTTGCAGCCCTGTGCCTTGAC...CCCTCCTCCGTGTTCTGGTCTCTGCTGAAGAACCTGCCCTTCCCTGGGAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCAGTAGCAGCCAGCCATaGTCAGCTGCTGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCSSSQP*SAAGSP
Trigger: GGGAGATCCAGCAGCTGAGCATGGCTGGCTGCTACT...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTTGGCCTTGCACTCGCTaGTCAGCTGGCTGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLWPCTR*SAGWRR
Trigger: TCGACGCCAGCCAGCTGAGCAGCGAGTGCAAGGCCA...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTGGAGTGAACAGCGTCTaGTTGAGCTCCCGCACGCGG +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSGVNSV*LSSRTR
Trigger: CCGCGTGCGGGAGCTCAAGCAGACGCTGTTCACTCC...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCAGGACTTGGGCAGCTaGAGGGCATCCAGCACGACA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACQDLGS*RASSTT
Trigger: TGTCGTGCTGGATGCCCTGCAGCTGCCCAAGTCCTG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCCCGCCGTTGATGACCTaGTGGATCAGATGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTPPLMT*WIRWPP
Trigger: AGGCGGCCATCTGATCCAGCAGGTCATCAACGGCGG...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCCGCCGTTGATGACCTaGTGGATCAGATGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACPPLMT*WIRWPP
Trigger: AGGCGGCCATCTGATCCAGCAGGTCATCAACGGCGG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp AACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGTCGTCCTCCGCCTTaGGGAGCAGCGAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NASPRPKLHRATVPMREPCRPPP*GAASLG
Trigger: CCCCAGACTCGCTGCTCCGCAAGGCGGAGGACGACA...CGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GTGACCACAAACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGAGTCTCCAGGATGCTaGTGTCGATGTCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: VTTNTTAKGHASRSEVAGESPGC*CRCRPP
Trigger: CGGAGGACGACATCGACAGCAGCATCCTGGAGACTC...CCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTTTGTGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AGAAGCGGCCACCGTGGCACATGGGGTGAGGACTCAGATGCCAGGAGGATGTCCCCAGAGTCTCCAGGATaGTGCTGTCGATGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: RSGHRGTWGEDSDARRMSPESPG*CCRCRP
Trigger: AGGACGACATCGACAGCAGCATCCTGGAGACTCTGG...GGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTTCAGGTGGCGCAGGTTaGAGCAGGACGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLSGGAG*SRTPPE
Trigger: CTCTGGTGGCGTCCTGCTGCAACCTGCGCCACCTGA...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCCACACGCACTTTCTTaGCAAAGCCGCGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACPHALS*QSRAAL
Trigger: CAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTGGGCTGGGACAGGACTaGACGCCCACACGCACTTTC +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLGLGQD*TPTRTF
Trigger: GAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCC...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGACAGGGACCGCAACTaGTGGCACTGCAGGCCGATA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACDRDRN*WHCRPI
Trigger: TATCGGCCTGCAGTGCCAGCAGTTGCGGTCCCTGTC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCCACCTTCCCCATCATaGCCAGGTTGGCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACPPSPS*PGWPAT
Trigger: TGTCGCTGGCCAACCTGGGCATGATGGGGAAGGTGG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp AGAAGCGGCCACCGTGGCACATGGGGTGAGGACTCAGATGCCAGGAGGATGTCCGGTCCCTCAGCCGCTTaGAGTGCTTCAACATGTCTG +
Preference number: 4 (lower is better)
Translates to: RSGHRGTWGEDSDARRMSGPSAA*SASTCL
Trigger: CAGACATGTTGAAGCACTGCAAGCGGCTGAGGGACC...GGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCTGCGGAGAAGCGACTaGTGCAGGCTCTTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACLRRSD*CRLLQV
Trigger: CACCTGCAAGAGCCTGCAGCAGTCGCTTCTCCGCAG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CTGGCCCGAGAAGGGGCTGGGACAGGACTGCACGCCCACACGCACTTTCTTGCCTTCAAACGATTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LAREGAGTGLHAHTHFLAFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAATCGTTTGAA...GGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGCTAGGCTGCCACAGCGCTaGCTGCTGGGGGATCAAGGT +
Preference number: 4 (lower is better)
Translates to: AECVSISPGTRMDLPREARLPQR*LLGDQG
Trigger: ACCTTGATCCCCCAGCAGGCAGCGCTGTGGCAGCCT...AGCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTCACCTCTCCCCACCTaGGGAGAAGCGACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACSPLPT*GEATAA
Trigger: TGCAGCAGTCGCTTCTCCGCAGGTGGGGAGAGGTGA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCTGAGATCCCGCCACTaGACTCCAGCCTGGACGACA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACLRSRH*TPAWTT
Trigger: TGTCGTCCAGGCTGGAGTGCAGTGGCGGGATCTCAG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTGAGAACCCTAGGAGGTaGACCCCGTCTGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLENPRR*TPSAIP
Trigger: CGGGATGGCAGACGGGGTCCACCTCCTAGGGTTCTC...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp GGACTGCACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGCACTGCGTGCATTGCAGCAACACGGTGTaGATGAGGCTCTTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: GLHAHTHFLAKAARHCVHCSNTV*MRLLSR
Trigger: CCTTGACAAGAGCCTCATCCACACCGTGTTGCTGCA...ATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTGCAGCTTCTCTAGGCTaGTGCAGCAGGGCACCACGC +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSAASLG*CSRAPR
Trigger: GCGTGGTGCCCTGCTGCACCAGCCTAGAGAAGCTGC...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp TGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGCAGGTTGCAGCTTCTCTAGGCTaGTGCAGCAGGGCACCACGC +
Preference number: 4 (lower is better)
Translates to: CVSISPGTRMDLPREGQVAASLG*CSRAPR
Trigger: GCGTGGTGCCCTGCTGCACCAGCCTAGAGAAGCTGC...AACCTGCCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CCA 90 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATTGCGGCACGTTGCTCTaGCCCACCATAAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: MGWRVPSLQPLNWQALPHCGTLL*PTISWP
Trigger: GGGCCAGCTTATGGTGGGCCAGAGCAACGTGCCGCA...ATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCCGTTCAGCCAGGACTTaGGCAGCTGCAGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTRSART*AAAGHP
Trigger: TGGATGCCCTGCAGCTGCCCAAGTCCTGGCTGAACG...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCGTTCAGCCAGGACTTaGGCAGCTGCAGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRSART*AAAGHP
Trigger: TGGATGCCCTGCAGCTGCCCAAGTCCTGGCTGAACG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp GTGACCACAAACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGACCTGCTGGATCAGATaGCCGCCTGACAGGGTACAG +
Preference number: 4 (lower is better)
Translates to: VTTNTTAKGHASRSEVAGTCWIR*PPDRVQ
Trigger: CTGTACCCTGTCAGGCGGCCATCTGATCCAGCAGGT...CCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTTTGTGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCCCGTTGATGACCTGCTaGATCAGATGGCCGCCTGAC +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCPLMTC*IRWPPD
Trigger: GTCAGGCGGCCATCTGATCCAGCAGGTCATCAACGG...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGCTTCCACGGGGCCCCGGTaGCAGGTGACCACAAACACA +
Preference number: 4 (lower is better)
Translates to: AECVSISPGTRMDLPREASTGPR*QVTTNT
Trigger: TGTGTTTGTGGTCACCTGCCACCGGGGCCCCGTGGA...AGCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATACCAGCCCGGCCGACTaGACTTCAGGGGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: MGWRVPSLQPLNWQALPHTSPAD*TSGGQH
Trigger: ATGCTGTCCCCCTGAAGTCCAGTCGGCCGGGCTGGT...ATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp AAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCTGCAGCCACTAAACTaGCAGGCCCTTCCCCATGTC +
Preference number: 4 (lower is better)
Translates to: KLHRATVPMREPWRRREPLQPLN*QALPHV
Trigger: GACATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAG...GGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATCCCCAGGAACGCGCATaGACCTTCCCAGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: MGWRVPSLQPLNWQALPHPQERA*TFPGKL
Trigger: CAGCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGG...ATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp ACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCTGGGGACCATTAGGGTaGGTTCTTTTCCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: TQQPRDTLPGRKWQGVRAWGPLG*VLFPAS
Trigger: TGATGCTGGGAAAAGAACCCACCCTAATGGTCCCCA...GGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGTTCCTGGCTGCCGTCCTaGGTCGAAGCAGCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: GMESPKSAATKLAGPSPCSWLPS*VEAASV
Trigger: GACACTTGCTGCTTCGACCCAGGACGGCAGCCAGGA...ACATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGACTACCCCAGAGTCTaGCAAGCAGGGTTGTCGGCG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACDYPRV*QAGLSA
Trigger: CGCCGACAACCCTGCTTGCCAGACTCTGGGGTAGTC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGCTGATCAGATGGCCGCCTaGCAGGGTACAGCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: AECVSISPGTRMDLPREADQMAA*QGTAAE
Trigger: TTCAGCCGCTGTACCCTGTCAGGCGGCCATCTGATC...AGCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTGATCAGATGGCCGCCTaGCAGGGTACAGCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSDQMAA*QGTAAE
Trigger: TTCAGCCGCTGTACCCTGTCAGGCGGCCATCTGATC...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp AATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCAGAACTCCTGACCTCGTaGTCCACCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NGMESPKSAATKLAGPSPELLTS*STHLSL
Trigger: GAGGCTGAGGTGGGTGGATCACGAGGTCAGGAGTTC...TGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp CAGCCTGCAGAAGGGTCCCTCTGGCCAGGAGGCAAAGGTTCTGCACTGGGTGCAACTCCTGGGCTCAAGTaGTCCTCCCAAAGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: QPAEGSLWPGGKGSALGATPGLK*SSQSVL
Trigger: CAACACACTTTGGGAGGATCACTTGAGCCCAGGAGT...TGCACCCAGTGCAGAACCTTTGCCTCCTGGCCAGAGGGACCCTTCTGCAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCTTCTCGCAACTCTGTaGACAGCTGGGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACLLATL*TAGASF
Trigger: GAAGGAGGCCCCAGCTGTTCACAGAGTTGCGAGAAG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTCGAGACGTCCTGGCTaGTGGCTCTTCTCGCAACTC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACSRRPG*WLFSQL
Trigger: GAGTTGCGAGAAGAGCCATCAGCCAGGACGTCTCGA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAACCAGGATTATTCCTaGGACAGCCAGCGGCCGACC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACNQDYS*DSQRPT
Trigger: GGTCGGCCGCTGGCTGTCTCAGGAATAATCCTGGTT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGAGGTGGGCAGATCATaGGGTCAGGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACEVGRS*GQEIET
Trigger: GGTCTCGATCTCCTGACCTCATGATCTGCCCACCTC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp AGCCACTGCGCCCGGCCAGATCTAGAAACTTCTAACTTGAATCCCACACCCCCAAGCGAGCGCAGGTGCTaGAGGGCCGAGAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: SHCARPDLETSNLNPTPPSERRC*RAESIL
Trigger: CAAGATGCTCTCGGCCCTGCAGCACCTGCGCTCGCT...TGGGGGTGTGGGATTCAAGTTAGAAGTTTCTAGATCTGGCCGGGCGCAGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCATCCAGCACGACATTaGGCGCCATGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACHPARH*APWSPG
Trigger: TCCTGGACTCCATGGCGCGCAATGTCGTGCTGGATG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTCAGGACTTGGGCAGCTaGAGGGCATCCAGCACGACA +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSQDLGS*RASSTT
Trigger: TGTCGTGCTGGATGCCCTGCAGCTGCCCAAGTCCTG...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp TCCATCCCTGCAGGAGCACTGCTGGCACCGCCAAGGCCGGAGCACTGGTCTGGATTGTTGAATTTCATGTaGTGCAGGAGGGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: SIPAGALLAPPRPEHWSGLLNFM*CRREEP
Trigger: CGGCTCTTCCCTCCTGCAGCACATGAAATTCAACAA...TCCAGACCAGTGCTCCGGCCTTGGCGGTGCCAGCAGTGCTCCTGCAGGGATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGAGTCTCCAGGATGCTaGTGTCGATGTCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACESPGC*CRCRPP
Trigger: CGGAGGACGACATCGACAGCAGCATCCTGGAGACTC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATCCACACGCACTTTCTTaGCAAAGCCGCGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: MGWRVPSLQPLNWQALPHPHALS*QSRAAL
Trigger: CAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGG...ATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTCCACACGCACTTTCTTaGCAAAGCCGCGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSPHALS*QSRAAL
Trigger: CAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGG...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCGCAACTGCTGGCACTaGAGGCCGATATTGACCAGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRNCWH*RPILTS
Trigger: GCTGGTCAATATCGGCCTGCAGTGCCAGCAGTTGCG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCCACCTTCCCCATCATaGCCAGGTTGGCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLPPSPS*PGWPAT
Trigger: TGTCGCTGGCCAACCTGGGCATGATGGGGAAGGTGG...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATCCACCTTCCCCATCATaGCCAGGTTGGCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: MGWRVPSLQPLNWQALPHPPSPS*PGWPAT
Trigger: TGTCGCTGGCCAACCTGGGCATGATGGGGAAGGTGG...ATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCTGGCACATGACAACCTaGAGGCAGCGAGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCWHMTT*RQRAMK
Trigger: CTTCATGGCTCGCTGCCTGCAGGTTGTCATGTGCCA...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp AACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGACTGCTGCAGGCTCTTaGAGGTGGCGAGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: NASPRPKLHRATVPMREPTAAGS*RWRGTP
Trigger: GGGAGTCCCTCGCCACCTGCAAGAGCCTGCAGCAGT...CGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCTGCGGAGAAGCGACTaGTGCAGGCTCTTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLLRRSD*CRLLQV
Trigger: CACCTGCAAGAGCCTGCAGCAGTCGCTTCTCCGCAG...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp ATGTCGTGTCATTTAGCACCTGGTCATGAGATACGGCGAGACCCCCAGGTCCAGGTGATCTCATCCAGGTaGACCAGGGGGACGTCCCGG +
Preference number: 4 (lower is better)
Translates to: MSCHLAPGHEIRRDPQVQVISSR*TRGTSR
Trigger: CCGGGACGTCCCCCTGGTGCACCTGGATGAGATCAC...CTGGACCTGGGGGTCTCGCCGTATCTCATGACCAGGTGCTAAATGACACGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGTAGGGCCCCCAGGGATTaGGGCTCAGTATACAAACCC +
Preference number: 4 (lower is better)
Translates to: GMESPKSAATKLAGPSPCRAPRD*GSVYKP
Trigger: GGGTTTGTATACTGAGCCGCAATCCCTGGGGGCCCT...ACATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCGACATTGCGCGCCATaGAGTCCAGGAGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRHCAP*SPGGSW
Trigger: CCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACACCTGCTGGATCAGATaGCCGCCTGACAGGGTACAG +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNTCWIR*PPDRVQ
Trigger: CTGTACCCTGTCAGGCGGCCATCTGATCCAGCAGGT...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCACCTGCTGGATCAGATaGCCGCCTGACAGGGTACAG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACTCWIR*PPDRVQ
Trigger: CTGTACCCTGTCAGGCGGCCATCTGATCCAGCAGGT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCCGTTGATGACCTGCTaGATCAGATGGCCGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACPLMTC*IRWPPD
Trigger: GTCAGGCGGCCATCTGATCCAGCAGGTCATCAACGG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACAGGGACCGCAACTGCTaGCACTGCAGGCCGATATTG +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNRDRNC*HCRPIL
Trigger: CAATATCGGCCTGCAGTGCCAGCAGTTGCGGTCCCT...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAGGGACCGCAACTGCTaGCACTGCAGGCCGATATTG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRDRNC*HCRPIL
Trigger: CAATATCGGCCTGCAGTGCCAGCAGTTGCGGTCCCT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp AACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGGAGGCGAAGGCTTaGTCTGGTGTGGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: NASPRPKLHRATVPMREPWEAKA*SGVGPT
Trigger: GGTGGGACCCACACCAGACCAAGCCTTCGCCTCCCA...CGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATCCACCTTCGGAAGCCTaGTGGAGCCGAGTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: MGWRVPSLQPLNWQALPHPPSEA*WSRVLP
Trigger: AGGCAACACTCGGCTCCACCAGGCTTCCGAAGGTGG...ATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGAAGCGGCCACCGTGGCACATGGGGTGAGGACTCAGATGCCAGGAGGATGTCCAAGGCAGCTTTGCTCTaGGTCATCAGGCTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: RSGHRGTWGEDSDARRMSKAALL*VIRLKC
Trigger: GCACTTGAGCCTGATGACCCAGAGCAAAGCTGCCTT...GGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTGGCTCGAGACGTCCTaGCTGATGGCTCTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACWLETS*LMALLA
Trigger: TGCGAGAAGAGCCATCAGCCAGGACGTCTCGAGCCA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp AGCCACTGCGCCCGGCCAGATCTAGAAACTTCTAACTTGAATCCCACACCCCCAAAGGCGTGGAGGTTCTaGGGAGTGCGGTCGCTAAGC +
Preference number: 4 (lower is better)
Translates to: SHCARPDLETSNLNPTPPKAWRF*GVRSLS
Trigger: GCTTAGCGACCGCACTCCTCAGAACCTCCACGCCTT...TGGGGGTGTGGGATTCAAGTTAGAAGTTTCTAGATCTGGCCGGGCGCAGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGTGCTTCAACATGTCTaGGAGCGCGGGCATGTACAC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACVLQHV*ERGHVH
Trigger: GTGTACATGCCCGCGCTCTCAGACATGTTGAAGCAC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp GGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGTGTGCTTCAACATGTCTaGGAGCGCGGGCATGTACAC +
Preference number: 4 (lower is better)
Translates to: GMESPKSAATKLAGPSPCVLQHV*ERGHVH
Trigger: GTGTACATGCCCGCGCTCTCAGACATGTTGAAGCAC...ACATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp ATGTCACCCAGAACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCAGAGCAACAGTCCCCATaGGAGAGCCGTGGAGACGCC +
Preference number: 4 (lower is better)
Translates to: MSPRTHPLDLNFTEQQSPEQQSP*ESRGDA
Trigger: GGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTC...TGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTTCTGGGTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp GCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCCAAGGCTGGACGGGCCGTTaGAAACAAGAAAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ALLVGLKSHRRGSNQQSQGWTGR*KQEKPS
Trigger: GGAAGGCTTTTCTTGTTTTCAACGGCCCGTCCAGCC...TTGGGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp ACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCTCATCGAAAGGCAGGTaGTGCATGTCGTGTCATTTA +
Preference number: 4 (lower is better)
Translates to: TQQPRDTLPGRKWQGVRASSKGR*CMSCHL
Trigger: TAAATGACACGACATGCATCACCTGCCTTTCGATGA...GGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GCCAAGTGTTCTGACAGGCGGTTTTCCCGTAAACCGACCCCTTCAGCGTTTCTGGTCTGCCATCCCGGCTaGTGCAGGGTGCATGTCATC +
Preference number: 4 (lower is better)
Translates to: AKCSDRRFSRKPTPSAFLVCHPG*CRVHVI
Trigger: GATGACATGCACCCTGCAGCAGCCGGGATGGCAGAC...CAGAAACGCTGAAGGGGTCGGTTTACGGGAAAACCGCCTGTCAGAACACTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTCATCCAGCACGACATTaGGCGCCATGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSHPARH*APWSPG
Trigger: TCCTGGACTCCATGGCGCGCAATGTCGTGCTGGATG...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCCAGAGTCTCCAGGATaGTGCTGTCGATGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNPESPG*CCRCRP
Trigger: AGGACGACATCGACAGCAGCATCCTGGAGACTCTGG...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCCAGAGTCTCCAGGATaGTGCTGTCGATGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACPESPG*CCRCRP
Trigger: AGGACGACATCGACAGCAGCATCCTGGAGACTCTGG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGAAAGCCGCGCGGCACTaGGTGCATGGCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWKAARH*VHGRLG
Trigger: GCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTT...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCGCAACTGCTGGCACTaGAGGCCGATATTGACCAGC +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLRNCWH*RPILTS
Trigger: GCTGGTCAATATCGGCCTGCAGTGCCAGCAGTTGCG...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp AACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGCCACCTTCCCCATCATaGCCAGGTTGGCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: NASPRPKLHRATVPMREPPPSPS*PGWPAT
Trigger: TGTCGCTGGCCAACCTGGGCATGATGGGGAAGGTGG...CGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACGGTCCCTCAGCCGCTTaGAGTGCTTCAACATGTCTG +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNGPSAA*SASTCL
Trigger: CAGACATGTTGAAGCACTGCAAGCGGCTGAGGGACC...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGGTCCCTCAGCCGCTTaGAGTGCTTCAACATGTCTG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACGPSAA*SASTCL
Trigger: CAGACATGTTGAAGCACTGCAAGCGGCTGAGGGACC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGTTGGCACATGACAACCTaGAGGCAGCGAGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: GMESPKSAATKLAGPSPCWHMTT*RQRAMK
Trigger: CTTCATGGCTCGCTGCCTGCAGGTTGTCATGTGCCA...ACATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTGGCACATGACAACCTaGAGGCAGCGAGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACWHMTT*RQRAMK
Trigger: CTTCATGGCTCGCTGCCTGCAGGTTGTCATGTGCCA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp AAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAGCATATGGTCTGCTaGTTAACAGCCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KLHRATVPMREPWRRREPQHMVC*LTAELC
Trigger: GCAGAGCTCGGCTGTTAAGCAGCAGACCATATGCTG...GGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCCAGAAAGCAGAGGTTaGAGTGAGCTGAGATCCCGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACPESRG*SELRSR
Trigger: GCGGGATCTCAGCTCACTGCAACCTCTGCTTTCTGG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp AAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCTGCAGCAACACGGTGTaGATGAGGCTCTTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: KLHRATVPMREPWRRREPCSNTV*MRLLSR
Trigger: CCTTGACAAGAGCCTCATCCACACCGTGTTGCTGCA...GGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp ATGTCACCCAGAACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCACGCAGGGAAGTGAGGTaGCAGCCCGAGAGGTTCACC +
Preference number: 4 (lower is better)
Translates to: MSPRTHPLDLNFTEQQSPRREVR*QPERFT
Trigger: GGTGAACCTCTCGGGCTGCCACCTCACTTCCCTGCG...TGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTTCTGGGTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTCGACATTGCGCGCCATaGAGTCCAGGAGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSRHCAP*SPGGSW
Trigger: CCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCG...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp AACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGCGTTCAGCCAGGACTTaGGCAGCTGCAGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: NASPRPKLHRATVPMREPRSART*AAAGHP
Trigger: TGGATGCCCTGCAGCTGCCCAAGTCCTGGCTGAACG...CGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACTGGCGGAGGAGAAGTTaGACCCAATCAGCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNWRRRS*TQSARG
Trigger: ACCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCA...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTGGCGGAGGAGAAGTTaGACCCAATCAGCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACWRRRS*TQSARG
Trigger: ACCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CCA 90 bp CCCTTCCCCATGTCACACTTGACCATGCAAGGGGACACTCAGATACACGGTGACCCTGGACAAGGAGCTTaGCCCCCAGAGCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PFPMSHLTMQGDTQIHGDPGQGA*PPEQGA
Trigger: AGCTCCTTGCTCTGGGGGCCAAGCTCCTTGTCCAGG...GTCACCGTGTATCTGAGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCCTTCCCCATGTCACACTTGACCATGCAAGGGGACACTCAGATACACGGTGACCTCAAGTGCCTGCTCTaGGCCACCTTCGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: PFPMSHLTMQGDTQIHGDLKCLL*ATFGSL
Trigger: CAGGCTTCCGAAGGTGGCCCAGAGCAGGCACTTGAG...GTCACCGTGTATCTGAGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGCCACTGCGCCCGGCCAGATCTAGAAACTTCTAACTTGAATCCCACACCCCCAAGGGCGCTGCTGAGCTaGCAGGCAACCCTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SHCARPDLETSNLNPTPPRALLS*QATLVC
Trigger: ACACACAAGGGTTGCCTGCCAGCTCAGCAGCGCCCT...TGGGGGTGTGGGATTCAAGTTAGAAGTTTCTAGATCTGGCCGGGCGCAGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCGTCTCCTCTGCCTTTaGTTTAGTGGCCCCACACTT +
Preference number: 4 (lower is better)
Translates to: KLHRATVPMREPWRRREPRLLCL*FSGPTL
Trigger: AAGTGTGGGGCCACTAAACCAAAGGCAGAGGAGACG...GGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCACTGGCTGGACACGGTaGCTTACAACTGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTTGWTR*LTTAVP
Trigger: TGGGACTGCAGTTGTAAGCCACCGTGTCCAGCCAGT...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTGGCCTCTCAAAGTGCTaGGAGCCACTCACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLGLSKC*EPLTGV
Trigger: CACACCTGTGAGTGGCTCCCAGCACTTTGAGAGGCC...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAACTCTGTGAACAGCTaGGGCCTCCTTCCTGTCACC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACNSVNS*GLLPVT
Trigger: GGTGACAGGAAGGAGGCCCCAGCTGTTCACAGAGTT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR TCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTGTGCTTCAACATGTCTaGGAGCGCGGGCATGTACAC +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLVLQHV*ERGHVH
Trigger: GTGTACATGCCCGCGCTCTCAGACATGTTGAAGCAC...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp ATGTCACCCAGAACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCAGGAGCAGAGGGAAGATaGCGACGTTTAACGCGGGCC +
Preference number: 4 (lower is better)
Translates to: MSPRTHPLDLNFTEQQSPGAEGR*RRLTRA
Trigger: GGCCCGCGTTAAACGTCGTCATCTTCCCTCTGCTCC...TGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTTCTGGGTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGGAGGTTGTAGTGAGTaGGCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: MGWRVPSLQPLNWQALPHGGCSE*AEIVPL
Trigger: CAGTGGCACGATCTCAGCTCACTCACTACAACCTCC...ATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCGGATCCGCAACCCCGTaGCTCCCACCTGCCCGGCTA +
Preference number: 4 (lower is better)
Translates to: VSRYSNKAECVSISPGTRGSATP*LPPARL
Trigger: TAGCCGGGCAGGTGGGAGGCACGGGGTTGCGGATCC...GCGCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR GCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCCGGCTGCTGCAGGGTaGATGTCATCATCATCATTG +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNPAAAG*MSSSSL
Trigger: CAATGATGATGATGACATGCACCCTGCAGCAGCCGG...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGGAGGTGGACCCCGTCTaGCATCCCGGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWEVDPV*HPGCCR
Trigger: CCTGCAGCAGCCGGGATGGCAGACGGGGTCCACCTC...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACATCTCCTTCACCAGCTaGCTCACTTTGTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNISFTS*LTLSSL
Trigger: GAGCGAGGACAAAGTGAGGCAGCTGGTGAAGGAGAT...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGATCTCCTTCACCAGCTaGCTCACTTTGTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: AECVSISPGTRMDLPREGISFTS*LTLSSL
Trigger: GAGCGAGGACAAAGTGAGGCAGCTGGTGAAGGAGAT...CCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp ATGTCACCCAGAACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCACCACACGCACTTTCTTaGCAAAGCCGCGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: MSPRTHPLDLNFTEQQSPPHALS*QSRAAL
Trigger: CAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGG...TGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTTCTGGGTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCTCAGCCGCTTGCAGTaGTTCAACATGTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACLSRLQ*FNMSES
Trigger: GCTCTCAGACATGTTGAAGCACTGCAAGCGGCTGAG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCCAATTGTCCAGGCTGGAGTaGAATGGTGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ALLVGLKSHRRGSNQQSQLSRLE*NGVISA
Trigger: AGCCGAGATCACACCATTGCACTCCAGCCTGGACAA...TTGGGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACACGGTGGCTTACAACTaGAGTCCCAGCTACTCAGGA +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNTVAYN*SPSYSG
Trigger: TCCTGAGTAGCTGGGACTGCAGTTGTAAGCCACCGT...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCTGCAGCAACACGGTGTaGATGAGGCTCTTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTCSNTV*MRLLSR
Trigger: CCTTGACAAGAGCCTCATCCACACCGTGTTGCTGCA...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGGGAGCGAGTTGCGGATaGCGGGCTCGTTGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWGASCG*RARCGA
Trigger: TGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCC...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGTGCGCGGCTGCAGGGTaGGAGCGAGTTGCGGATGGC +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWCAAAG*ERVADG
Trigger: GCCATCCGCAACTCGCTCCCACCCTGCAGCCGCGCA...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGAGCACGGCATCGGGCTaGAGGGTGCCGCTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWSTASG*RVPLRE
Trigger: CTCTCGCAGCGGCACCCTCCAGCCCGATGCCGTGCT...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp GCTCTAAGTCAGAGGATGGTTGCAGGGGACACTAAAAATACAAGGTCCACTGTTGCGGGCCGCTCGGCCTaGAAGCTGCGGAGAAGCGAC +
Preference number: 4 (lower is better)
Translates to: ALSQRMVAGDTKNTRSTVAGRSA*KLRRSD
Trigger: GTCGCTTCTCCGCAGCTTCCAGGCCGAGCGGCCCGC...AACAGTGGACCTTGTATTTTTAGTGTCCCCTGCAACCATCCTCTGACTTAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp ATGTCGTGTCATTTAGCACCTGGTCATGAGATACGGCGAGACCCCCAGGTCCAGACCATCGGGCACTGCTaGAATCAGCCTGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: MSCHLAPGHEIRRDPQVQTIGHC*NQPAEG
Trigger: CCCTTCTGCAGGCTGATTCCAGCAGTGCCCGATGGT...CTGGACCTGGGGGTCTCGCCGTATCTCATGACCAGGTGCTAAATGACACGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp ACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCCAGCTAGGATGCATTCCTaGAGCAGACGCAATTCTCTA +
Preference number: 4 (lower is better)
Translates to: TSQSNSPHERAVETPGAPARMHS*SRRNSL
Trigger: TAGAGAATTGCGTCTGCTCCAGGAATGCATCCTAGC...TGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCACAGAGCTTTACGGTaGGGCCTTGTTCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNHRALR*GLVPVA
Trigger: AGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTG...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
3UTR CAA 72 bp AAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTaGTTCCAGTTGCTGCAGGCTGCCATTCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: KTLGHTELYGGA*FQLLQAAIPEG
Trigger: ACCTTCAGGAATGGCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp AGCCACTGCGCCCGGCCAGATCTAGAAACTTCTAACTTGAATCCCACACCCCCAGCAACACGGTGTGGATaGGGCTCTTGTCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: SHCARPDLETSNLNPTPPATRCG*GSCQGT
Trigger: TGTGCCTTGACAAGAGCCTCATCCACACCGTGTTGC...TGGGGGTGTGGGATTCAAGTTAGAAGTTTCTAGATCTGGCCGGGCGCAGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp AAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCTCAGAGAGGAGGCGATaGCCCCATACATACAAGAAA +
Preference number: 4 (lower is better)
Translates to: KLHRATVPMREPWRRREPSERRR*PHTYKK
Trigger: TTTCTTGTATGTATGGGGTCATCGCCTCCTCTCTGA...GGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp GCTCTAAGTCAGAGGATGGTTGCAGGGGACACTAAAAATACAAGGTCCACTGTTGAGACACAGGCCCCCTaGGGGTCCGGGAACCTCCCA +
Preference number: 4 (lower is better)
Translates to: ALSQRMVAGDTKNTRSTVETQAP*GSGNLP
Trigger: TGGGAGGTTCCCGGACCCTCAGGGGGCCTGTGTCTC...AACAGTGGACCTTGTATTTTTAGTGTCCCCTGCAACCATCCTCTGACTTAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp TGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGCAGGTTCCGGCTGCTGCAGGGTaGATGTCATCATCATCATTG +
Preference number: 4 (lower is better)
Translates to: CVSISPGTRMDLPREGQVPAAAG*MSSSSL
Trigger: CAATGATGATGATGACATGCACCCTGCAGCAGCCGG...AACCTGCCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp GCAGTCCCAACCTCAGGGGACCTCTCTGGGGCCACAGGCATCATCTGGCTAGAATTGAATTTCATGTGCTaGAGGAGGGAAGAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: AVPTSGDLSGATGIIWLELNFMC*RREEPF
Trigger: GAACGGCTCTTCCCTCCTGCAGCACATGAAATTCAA...TTCTAGCCAGATGATGCCTGTGGCCCCAGAGAGGTCCCCTGAGGTTGGGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGTGTCGTCCTCCGCCTTaGGGAGCAGCGAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWCRPPP*GAASLG
Trigger: CCCCAGACTCGCTGCTCCGCAAGGCGGAGGACGACA...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCCACTCTGTGCGCGGCTaGAGGGTGGGAGCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: VSRYSNKAECVSISPGTRHSVRG*RVGASC
Trigger: GCAACTCGCTCCCACCCTGCAGCCGCGCACAGAGTG...GCGCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGTGTGCGAGCGTCAGGTaGCGCAGGAAGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWCASVR*RRKASW
Trigger: CCAGCTGGCCTTCCTGCGGCACCTGACGCTCGCACA...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCTCAGCCGCTTGCAGTaGTTCAACATGTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLLSRLQ*FNMSES
Trigger: GCTCTCAGACATGTTGAAGCACTGCAAGCGGCTGAG...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GCTCTAAGTCAGAGGATGGTTGCAGGGGACACTAAAAATACAAGGTCCACTGTTGCTGGTCCTGCGGCCTaGAGACTAGGAGACGGGGCC +
Preference number: 4 (lower is better)
Translates to: ALSQRMVAGDTKNTRSTVAGPAA*RLGDGA
Trigger: GGCCCCGTCTCCTAGTCTGCAGGCCGCAGGACCAGC...AACAGTGGACCTTGTATTTTTAGTGTCCCCTGCAACCATCCTCTGACTTAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCCTTGTTCCAGTTGCTaGAGGCTGCCATTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLPCSSC*RLPFLK
Trigger: CTTCAGGAATGGCAGCCTGCAGCAACTGGAACAAGG...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACGAATCAGATCTGTGCTaGGGACGTGACTCAGGATGT +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNESDLC*GRDSGC
Trigger: ACATCCTGAGTCACGTCCCCAGCACAGATCTGATTC...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp GTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCGCACGCGGCTCAGGGTaGCCTTGCACTCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VSRYSNKAECVSISPGTRARGSG*PCTRCS
Trigger: TGAGCAGCGAGTGCAAGGCCACCCTGAGCCGCGTGC...GCGCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGTCCGAGCTGTGGTGGTaGGCGGCCGAGAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWSELWW*AAERFR
Trigger: CCTGAACCTCTCGGCCGCCCACCACCACAGCTCGGA...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp ATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCAACACGGAGGAGGGCTaGGGGCACGCCTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: MFRVILTKPNVYRFPQERNTEEG*GHAWPE
Trigger: CTCGGGCCAGGCGTGCCCCCAGCCCTCCTCCGTGTT...GCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000453700.7
ENST00000620087.1
CDS-3UTR CCA 90 bp AACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGCCGAGCTCTGCCAATTaGGGACCATTAGGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: NASPRPKLHRATVPMREPPSSAN*GPLGWV
Trigger: AACCCACCCTAATGGTCCCCAATTGGCAGAGCTCGG...CGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGCCACTGCGCCCGGCCAGATCTAGAAACTTCTAACTTGAATCCCACACCCCCACCATGGCGGGTCTGGTaGCAACAGCTTGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: SHCARPDLETSNLNPTPPPWRVW*QQLGEK
Trigger: CTTTTCTCCAAGCTGTTGCCACCAGACCCGCCATGG...TGGGGGTGTGGGATTCAAGTTAGAAGTTTCTAGATCTGGCCGGGCGCAGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTGTGACAGGAAGACCCTaGGACACACAGAGCTTTACG +
Preference number: 4 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSVTGRP*DTQSFT
Trigger: CGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp AGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCTGAGAGGGAGCGCAGGTaGCGCAGCCGGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SHLKWGHVIATPALRILSERERR*RSRARS
Trigger: GCTCCTGGCCCGGCTGCGTCACCTGCGCTCCCTCTC...AGAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp AAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCTGTAGTTTGCTACAGTaGACACCAATGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KLHRATVPMREPWRRREPCSLLQ*TPMSGA
Trigger: TGCTCCTGACATTGGTGTTCACTGTAGCAAACTACA...GGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGGCAGGCTGCCATTCCTaGAGGTCGGGGGACAAGCTG +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWAGCHS*RSGDKL
Trigger: CAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGC...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTTGAATTTCATGTGCTaGAGGAGGGAAGAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACLNFMC*RREEPF
Trigger: GAACGGCTCTTCCCTCCTGCAGCACATGAAATTCAA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACTTGTTGAATTTCATGTaGTGCAGGAGGGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNLLNFM*CRREEP
Trigger: CGGCTCTTCCCTCCTGCAGCACATGAAATTCAACAA...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGTTGTTGAATTTCATGTaGTGCAGGAGGGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: AECVSISPGTRMDLPREGLLNFM*CRREEP
Trigger: CGGCTCTTCCCTCCTGCAGCACATGAAATTCAACAA...CCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTTGTTGAATTTCATGTaGTGCAGGAGGGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACLLNFM*CRREEP
Trigger: CGGCTCTTCCCTCCTGCAGCACATGAAATTCAACAA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GCCAAGTGTTCTGACAGGCGGTTTTCCCGTAAACCGACCCCTTCAGCGTTTCTGCTCAGCCGCTTGCAGTaGTTCAACATGTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: AKCSDRRFSRKPTPSAFLLSRLQ*FNMSES
Trigger: GCTCTCAGACATGTTGAAGCACTGCAAGCGGCTGAG...CAGAAACGCTGAAGGGGTCGGTTTACGGGAAAACCGCCTGTCAGAACACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGCGGAGAAGCGACTGCTaGAGGCTCTTGCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWRRSDC*RLLQVA
Trigger: CGCCACCTGCAAGAGCCTGCAGCAGTCGCTTCTCCG...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGCTTTCAAACGATTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AECVSISPGTRMDLPREAFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAATCGTTTGAA...AGCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp GCAGTCCCAACCTCAGGGGACCTCTCTGGGGCCACAGGCATCATCTGGCTAGAAAGCAGCGGAAATTCTTaGTCTAAGTCAGAGGATGGT +
Preference number: 4 (lower is better)
Translates to: AVPTSGDLSGATGIIWLESSGNS*SKSEDG
Trigger: ACCATCCTCTGACTTAGAGCAAGAATTTCCGCTGCT...TTCTAGCCAGATGATGCCTGTGGCCCCAGAGAGGTCCCCTGAGGTTGGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GCTCTAAGTCAGAGGATGGTTGCAGGGGACACTAAAAATACAAGGTCCACTGTTCCAGGAGGTTCTTGGTaGCGCCGCTCTCCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: ALSQRMVAGDTKNTRSTVPGGSW*RRSPRS
Trigger: GCTTCGCGGAGAGCGGCGCCACCAAGAACCTCCTGG...AACAGTGGACCTTGTATTTTTAGTGTCCCCTGCAACCATCCTCTGACTTAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GCTCTAAGTCAGAGGATGGTTGCAGGGGACACTAAAAATACAAGGTCCACTGTTTCCGAGCTGTGGTGGTaGGCGGCCGAGAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ALSQRMVAGDTKNTRSTVSELWW*AAERFR
Trigger: CCTGAACCTCTCGGCCGCCCACCACCACAGCTCGGA...AACAGTGGACCTTGTATTTTTAGTGTCCCCTGCAACCATCCTCTGACTTAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCCTTCCCCATGTCACACTTGACCATGCAAGGGGACACTCAGATACACGGTGACAAAGTCAGGGTGAAGTaGGAGGAGACCTCAAACCCC +
Preference number: 4 (lower is better)
Translates to: PFPMSHLTMQGDTQIHGDKVRVK*EETSNP
Trigger: GGGGTTTGAGGTCTCCTCCCACTTCACCCTGACTTT...GTCACCGTGTATCTGAGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCACAACAGAAACTGGCTaGACACGGTGGCTTACAACT +
Preference number: 4 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTTTETG*TRWLTT
Trigger: AGTTGTAAGCCACCGTGTCCAGCCAGTTTCTGTTGT...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACTCAAACAACAGAAACTaGCTGGACACGGTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNSNNRN*LDTVAY
Trigger: GTAAGCCACCGTGTCCAGCCAGTTTCTGTTGTTTGA...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp ATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCTTCTCGAGGTGACTaGGACCGATGGGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: MFRVILTKPNVYRFPQERASRGD*DRWAAA
Trigger: AGCCGCCGCCCATCGGTCTCAGTCACCTCGAGAAGC...GCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCACTTAAAAATAGGTTaGTGTTGGCCAGGCGTTGTG +
Preference number: 4 (lower is better)
Translates to: LLGRLRQENVVNPGGRACHLKIG*CWPGVV
Trigger: CACAACGCCTGGCCAACATCAACCTATTTTTAAGTG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR GCA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTTTGAATTTCATGTGCTaGAGGAGGGAAGAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLLNFMC*RREEPF
Trigger: GAACGGCTCTTCCCTCCTGCAGCACATGAAATTCAA...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp AAGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCAAAGCCGCGCGGCACTaGGTGCATGGCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KSFEMGSCDCYSSLKNPFKAARH*VHGRLG
Trigger: GCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTT...GAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000453700.7
ENST00000620087.1
CDS-3UTR GCA 90 bp GTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCCCACACGCACTTTCTTaGCAAAGCCGCGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: VSRYSNKAECVSISPGTRPHALS*QSRAAL
Trigger: CAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGG...GCGCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000453700.7
ENST00000620087.1
CDS-3UTR GCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGGACAGGGACCGCAACTaGTGGCACTGCAGGCCGATA +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWDRDRN*WHCRPI
Trigger: TATCGGCCTGCAGTGCCAGCAGTTGCGGTCCCTGTC...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGGGTCGGGGGACAAGCTaGCTCTTCAACCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWGRGTS*LFNPSS
Trigger: AGAGCTGGGGTTGAAGAGGCAGCTTGTCCCCCGACC...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAAGCTGGCCCGAGAGGATaGCGCCCTCGCGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEAGPRG*RPRACG
Trigger: ACCGCACGCGCGAGGGCGCCATCCTCTCGGGCCAGC...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAAGGCTGGGGGCACGCCTaGCCCGAGAAGGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEGWGHA*PEKGLG
Trigger: TCCCAGCCCCTTCTCGGGCCAGGCGTGCCCCCAGCC...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp GCTCTAAGTCAGAGGATGGTTGCAGGGGACACTAAAAATACAAGGTCCACTGTTCCATCATGCCCAGGTTaGCCAGCGACAGGGACCGCA +
Preference number: 4 (lower is better)
Translates to: ALSQRMVAGDTKNTRSTVPSCPG*PATGTA
Trigger: TGCGGTCCCTGTCGCTGGCCAACCTGGGCATGATGG...AACAGTGGACCTTGTATTTTTAGTGTCCCCTGCAACCATCCTCTGACTTAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGCAGGTGGGGCGTGGCTaGCCGGGAGAGAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPQVGRG*PGERPP
Trigger: AGGGGGCCTCTCTCCCGGCCAGCCACGCCCCACCTG...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp AACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGTGTCCTAATGGGATaGAGAGTCCCAAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: NASPRPKLHRATVPMREPCVLMG*RVPSLQ
Trigger: CTGCAGACTTGGGACTCTCCATCCCATTAGGACACA...CGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp ACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTTAAGAATCCTTTCTaGGTTTTAATGTTTCGCGTT +
Preference number: 4 (lower is better)
Translates to: TQQPRDTLPGRKWQGVRALKNPF*VLMFRV
Trigger: AACGCGAAACATTAAAACCCAGAAAGGATTCTTAAG...GGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp GCTCTAAGTCAGAGGATGGTTGCAGGGGACACTAAAAATACAAGGTCCACTGTTTGGCCAGGGTTCCCATaGCGGGTCTGGTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: ALSQRMVAGDTKNTRSTVWPGFP*RVWWQQ
Trigger: CTGTTGCCACCAGACCCGCCATGGGAACCCTGGCCA...AACAGTGGACCTTGTATTTTTAGTGTCCCCTGCAACCATCCTCTGACTTAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
3UTR CAA 72 bp CATATGGTCTGCTGCTTAACAGCCGAGCTCTGCCAATaGGGGACCATTAGGGTGGGTTCTTTTCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: HMVCCLTAELCQ*GTIRVGSFPSI
Trigger: GATGCTGGGAAAAGAACCCACCCTAATGGTCCCCAATTGGCAGAGCTCGGCTGTTAAGCAGCAGACCATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGGTCAAGGCACAGGGCTaGAAGCTTCCGACAGGTACG +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWVKAQG*KLPTGT
Trigger: CGTACCTGTCGGAAGCTTGCAGCCCTGTGCCTTGAC...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp GTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCCATCCAGCACGACATTaGGCGCCATGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VSRYSNKAECVSISPGTRHPARH*APWSPG
Trigger: TCCTGGACTCCATGGCGCGCAATGTCGTGCTGGATG...GCGCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR GCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGGAGTCTCCAGGATGCTaGTGTCGATGTCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWESPGC*CRCRPP
Trigger: CGGAGGACGACATCGACAGCAGCATCCTGGAGACTC...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp AAGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCGTCCCCGACACTCTGTaGGCGGCTGCAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KSFEMGSCDCYSSLKNPFVPDTL*AAAGWE
Trigger: CTCCCACCCTGCAGCCGCGCACAGAGTGTCGGGGAC...GAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp AATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCACTGGTGGTCTCCAGGTaGCATTTTAAAGCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: NGMESPKSAATKLAGPSPLVVSR*HFKALK
Trigger: CTTTAGAGCTTTAAAATGGCACCTGGAGACCACCAG...TGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AGAAGCGGCCACCGTGGCACATGGGGTGAGGACTCAGATGCCAGGAGGATGTCCATCCAGAATGTAGTTTaGTACAGTGAACACCAATGT +
Preference number: 4 (lower is better)
Translates to: RSGHRGTWGEDSDARRMSIQNVV*YSEHQC
Trigger: ACATTGGTGTTCACTGTAGCAAACTACATTCTGGAT...GGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGGGGCCTTGTTCCAGTTaGTGCAGGCTGCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWGPCSS*CRLPFL
Trigger: CAGGAATGGCAGCCTGCAGCAACTGGAACAAGGCCC...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGCTCGGCCTCTCAAAGTaGTGGGAGCCACTCACAGGT +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWLGLSK*WEPLTG
Trigger: ACCTGTGAGTGGCTCCCAGCACTTTGAGAGGCCGAG...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CCA 90 bp GTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCACCTGCTGGATCAGATaGCCGCCTGACAGGGTACAG +
Preference number: 4 (lower is better)
Translates to: VSRYSNKAECVSISPGTRTCWIR*PPDRVQ
Trigger: CTGTACCCTGTCAGGCGGCCATCTGATCCAGCAGGT...GCGCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp AGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCTGGCCCGAGAAGGGGCTaGGACAGGACTGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: SHLKWGHVIATPALRILSGPRRG*DRTARP
Trigger: TGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCC...AGAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp GTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCCTGCAGCCACTAAACTaGCAGGCCCTTCCCCATGTC +
Preference number: 4 (lower is better)
Translates to: VSRYSNKAECVSISPGTRLQPLN*QALPHV
Trigger: GACATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAG...GCGCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp GCTCTAAGTCAGAGGATGGTTGCAGGGGACACTAAAAATACAAGGTCCACTGTTTCTCCAAAGGCCTCCTaGACAAGGAGCTTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ALSQRMVAGDTKNTRSTVSPKAS*TRSLAP
Trigger: GGGGGCCAAGCTCCTTGTCCAGGAGGCCTTTGGAGA...AACAGTGGACCTTGTATTTTTAGTGTCCCCTGCAACCATCCTCTGACTTAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp TCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGCCAGCCCCGGTCCCCTaGGTCCAACGGCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SFLGFNVSRYSNKAECVSPAPVP*VQRPVA
Trigger: AGCCACAGGCCGTTGGACCCAGGGGACCGGGGCTGG...CGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp GCCAAGTGTTCTGACAGGCGGTTTTCCCGTAAACCGACCCCTTCAGCGTTTCTGGTTCCTCAGTGTCTGTaGGGTTTGTGTTCATCATGC +
Preference number: 4 (lower is better)
Translates to: AKCSDRRFSRKPTPSAFLVPQCL*GLCSSC
Trigger: GCATGATGAACACAAACCCCACAGACACTGAGGAAC...CAGAAACGCTGAAGGGGTCGGTTTACGGGAAAACCGCCTGTCAGAACACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AAGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCCAGCGGTCCAGGCTCTaGCTCACTCCCCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KSFEMGSCDCYSSLKNPFQRSRL*LTPREA
Trigger: AGCCTCCCGGGGAGTGAGCCAGAGCCTGGACCGCTG...GAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGGCAACACGGTGTGGATaGGGCTCTTGTCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWATRCG*GSCQGT
Trigger: TGTGCCTTGACAAGAGCCTCATCCACACCGTGTTGC...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGGCACCACCTCCTGGTTaGTGTAGCCGGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPAPPPG*CSRGPG
Trigger: GCCTGGCCCCCGGCTACATCAACCAGGAGGTGGTGC...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR TCA 90 bp ATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGAACTCCTGACCTCGTaGTCCACCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MFRVILTKPNVYRFPQERELLTS*STHLSL
Trigger: GAGGCTGAGGTGGGTGGATCACGAGGTCAGGAGTTC...GCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000453700.7
ENST00000620087.1
CDS-3UTR TCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACCTGCCTCAGCCTCCTaGGTGGCTGGGACCACAGGC +
Preference number: 4 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEPASAS*VAGTTG
Trigger: GCCTGTGGTCCCAGCCACTCAGGAGGCTGAGGCAGG...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp GTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCTTTAGCACCTGGTCATaGGATACGGCGAGACCCCCA +
Preference number: 4 (lower is better)
Translates to: VSRYSNKAECVSISPGTRFSTWS*DTARPP
Trigger: TGGGGGTCTCGCCGTATCTCATGACCAGGTGCTAAA...GCGCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGCCCGTGCCTCCCACCTaGCCGGCTAGGGATGCTCGA +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPPVPPT*PARDAR
Trigger: TCGAGCATCCCTAGCCGGGCAGGTGGGAGGCACGGG...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR GCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGGCCAGCGAGCGCAGGTaGTGCAGGGCCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPASERR*CRAESI
Trigger: GATGCTCTCGGCCCTGCAGCACCTGCGCTCGCTGGC...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR GCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAAGTCCCCGACACTCTGTaGGCGGCTGCAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEVPDTL*AAAGWE
Trigger: CTCCCACCCTGCAGCCGCGCACAGAGTGTCGGGGAC...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAAGACGCTGGGCAGCTGTaGGAGCGTCAGGTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEDAGQL*ERQVPQ
Trigger: CTGCGGCACCTGACGCTCGCACAGCTGCCCAGCGTC...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp GTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCTGGCACATGACAACCTaGAGGCAGCGAGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: VSRYSNKAECVSISPGTRWHMTT*RQRAMK
Trigger: CTTCATGGCTCGCTGCCTGCAGGTTGTCATGTGCCA...GCGCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp ATGTCACCCAGAACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCAAAAGCTCTAAAGAAATaGCCAGGAACTGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: MSPRTHPLDLNFTEQQSPKALKK*PGTVGG
Trigger: CCCACCCACAGTTCCTGGGCATTTCTTTAGAGCTTT...TGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTTCTGGGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp GTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCTGCTTTCCAAGGCACTaGACCCCAGCCTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: VSRYSNKAECVSISPGTRCFPRH*TPASGT
Trigger: TGTTCCTGAGGCTGGGGTGCAGTGCCTTGGAAAGCA...GCGCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCTGCTCAGCTGGCTaGCGTCGAAGCCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LMFRVILTKPNVYRFPQERCSAG*RRSRGS
Trigger: TGAGCCCCGGCTTCGACGCCAGCCAGCTGAGCAGCG...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp TCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGCACTCGCTGCTCAGCTaGCTGGCGTCGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SFLGFNVSRYSNKAECVSHSLLS*LASKPG
Trigger: CCCCGGCTTCGACGCCAGCCAGCTGAGCAGCGAGTG...CGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTGGCTGGGGGCACGCCTaGCCCGAGAAGGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFGWGHA*PEKGLG
Trigger: TCCCAGCCCCTTCTCGGGCCAGGCGTGCCCCCAGCC...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGCCCATGAGAGAGCCGTaGAGACGCCGGGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPPMREP*RRREPQ
Trigger: CTGGGGCTCCCGGCGTCTCCACGGCTCTCTCATGGG...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGTACTGTACTCCAGCCTaGGTGACAGGAAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWYCTPA*VTGRPW
Trigger: CCAGGGTCTTCCTGTCACCCAGGCTGGAGTACAGTA...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp TCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATCCACCTGTGCCAGTaGGCAGAGGCGCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SFLGFNVSRYSNKAECVSIHLCQ*AEAPGW
Trigger: CCACCCTGGCGCCTCTGCTCACTGGCACAGGTGGAT...CGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGTGTGCAGGCTGGTCTTaGACTTCTGGCTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWCAGWS*TSGFKQ
Trigger: CTGCTTGAAGCCAGAAGTTCAAGACCAGCCTGCACA...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR GCA 90 bp AAGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCGCTCGGCCTGGAAGCTaGGGAGAAGCGACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KSFEMGSCDCYSSLKNPFARPGS*GEATAA
Trigger: TGCAGCAGTCGCTTCTCCGCAGCTTCCAGGCCGAGC...GAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp ATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGTCATCAGGCTCAAGTaGCTGCTCTGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: MFRVILTKPNVYRFPQERVIRLK*LLWATF
Trigger: GAAGGTGGCCCAGAGCAGGCACTTGAGCCTGATGAC...GCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAATGGCCCACCATAAGCTaGCCCGAGAGGATGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEWPTIS*PERMAP
Trigger: GGGCGCCATCCTCTCGGGCCAGCTTATGGTGGGCCA...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp AGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCTTGCGGCACGTTGCTCTaGCCCACCATAAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SHLKWGHVIATPALRILSCGTLL*PTISWP
Trigger: GGGCCAGCTTATGGTGGGCCAGAGCAACGTGCCGCA...AGAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCGCAGGAAGGCCAGCTaGCCGATGGCGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFRRKAS*PMAATS
Trigger: GGAGGTGGCCGCCATCGGCCAGCTGGCCTTCCTGCG...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp AGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCTCACTGGCTCAGCGCCTaGAAGAACTGGGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: SHLKWGHVIATPALRILSHWLSA*KNWALA
Trigger: CGCCAACGCCCAGTTCTTCCAGGCGCTGAGCCAGTG...AGAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGGCAGAGGCGCCAGGGTaGGGTCAAGACTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPAEAPG*GQDCQV
Trigger: CACCTGGCAGTCTTGACCCCACCCTGGCGCCTCTGC...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp ATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGAGTGGGGAATGTTCTaGAGGAAGGAGTGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: MFRVILTKPNVYRFPQEREWGMF*RKEWGG
Trigger: TCCGCCCCACTCCTTCCTCCAGAACATTCCCCACTC...GCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGTTTTATAGAGATTGGTaGGGGGAGGGCGGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWFYRDW*GEGGSR
Trigger: ACGAGACCCGCCCTCCCCCCACCAATCTCTATAAAA...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR TCA 90 bp AAGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCGATCAGATGGCCGCCTaGCAGGGTACAGCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: KSFEMGSCDCYSSLKNPFDQMAA*QGTAAE
Trigger: TTCAGCCGCTGTACCCTGTCAGGCGGCCATCTGATC...GAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR TCA 90 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATACCTCACTTTGTCCATaGATTTCACACGTTTTCTTA +
Preference number: 4 (lower is better)
Translates to: MGWRVPSLQPLNWQALPHTSLCP*ISHVFL
Trigger: TAAGAAAACGTGTGAAATTCATGGACAAAGTGAGGT...ATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCTGTCTGCCATCCCGGCTaGTGCAGGGTGCATGTCATC +
Preference number: 4 (lower is better)
Translates to: SHLKWGHVIATPALRILSVCHPG*CRVHVI
Trigger: GATGACATGCACCCTGCAGCAGCCGGGATGGCAGAC...AGAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR GCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGGTGATCTCATCCAGGTaGACCAGGGGGACGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPVISSR*TRGTSR
Trigger: CCGGGACGTCCCCCTGGTGCACCTGGATGAGATCAC...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp GCTCTAAGTCAGAGGATGGTTGCAGGGGACACTAAAAATACAAGGTCCACTGTTTTGTCCAGGCTGGAGTaGAATGGTGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ALSQRMVAGDTKNTRSTVLSRLE*NGVISA
Trigger: AGCCGAGATCACACCATTGCACTCCAGCCTGGACAA...AACAGTGGACCTTGTATTTTTAGTGTCCCCTGCAACCATCCTCTGACTTAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAAAGCTGGGAGGCAGCCTaGACAGGAGGGCTGTACCTC +
Preference number: 4 (lower is better)
Translates to: LMFRVILTKPNVYRFPQESWEAA*TGGLYL
Trigger: GAGGTACAGCCCTCCTGTGCAGGCTGCCTCCCAGCT...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCTAGGAGGCAAAGGTTCTaGACTGGGTGCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SHLKWGHVIATPALRILSRRQRF*TGCSLG
Trigger: CCCCAGGCTGCACCCAGTGCAGAACCTTTGCCTCCT...AGAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTACCCGCAGGCACACGTaGACGCAGGCACACGCACGC +
Preference number: 4 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFTRRHT*TQAHAR
Trigger: GCGTGCGTGTGCCTGCGTGCACGTGTGCCTGCGGGT...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp TCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGCTGGCAGCAGCGCTCTaGCCACGTCCACAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SFLGFNVSRYSNKAECVSLAAAL*PRPQEV
Trigger: CACTTCCTGTGGACGTGGGCAGAGCGCTGCTGCCAG...CGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGCTGGGAGAGGACCCGTaGGCTTCAGAGAGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPLGEDP*ASERRR
Trigger: TCGCCTCCTCTCTGAAGCCCACGGGTCCTCTCCCAG...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AAGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCTCTGATCGCCGCGCCTaGTGGTCTCCAGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: KSFEMGSCDCYSSLKNPFSDRRA*WSPGAI
Trigger: AATGGCACCTGGAGACCACCAGGCGCGGCGATCAGA...GAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCGGGAGGCTTCTGTaGCCAGGGTTCCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFPGRLL*PGFPWR
Trigger: CCGCCATGGGAACCCTGGCCACAGAAGCCTCCCGGG...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGTGCCAGGGACGGAGATaGGGAAGGCGTGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPCQGRR*GRRGGS
Trigger: AGAACCTCCACGCCTTCCTCATCTCCGTCCCTGGCA...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR TCA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTGCTTCTCGAGGTGACTaGGACCGATGGGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFASRGD*DRWAAA
Trigger: AGCCGCCGCCCATCGGTCTCAGTCACCTCGAGAAGC...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACCGCCGTTGATGACCTaGTGGATCAGATGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEPPLMT*WIRWPP
Trigger: AGGCGGCCATCTGATCCAGCAGGTCATCAACGGCGG...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR GCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGGACAGGGACCGCAACTaGTGGCACTGCAGGCCGATA +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPDRDRN*WHCRPI
Trigger: TATCGGCCTGCAGTGCCAGCAGTTGCGGTCCCTGTC...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp AACGCATCCCCTCGACCTAAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGGAGTATAAATTATGCTaGTGGTTAAAACCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: NASPRPKLHRATVPMREPEYKLC*WLKPLA
Trigger: AGCAAGCGGTTTTAACCAGCAGCATAATTTATACTC...CGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTTAGGTCGAGGGGATGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCTCGACATTGCGCGCCATaGAGTCCAGGAGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SHLKWGHVIATPALRILSRHCAP*SPGGSW
Trigger: CCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCG...AGAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp TCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGCGTTCAGCCAGGACTTaGGCAGCTGCAGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SFLGFNVSRYSNKAECVSRSART*AAAGHP
Trigger: TGGATGCCCTGCAGCTGCCCAAGTCCTGGCTGAACG...CGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp AATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATATAAATTATGCTGCTaGTTAAAACCGCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: NGMESPKSAATKLAGPSPYKLCC*LKPLAH
Trigger: ATGAGCAAGCGGTTTTAACCAGCAGCATAATTTATA...TGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGCCTTCGGAAGCCTGGTaGAGCCGAGTGTTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPPSEAW*SRVLPG
Trigger: ACCAGGCAACACTCGGCTCCACCAGGCTTCCGAAGG...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp CCTCAGTGTCTGTGGGGTTTGTGTTCATCATGCCCAGTAGATCTAGAAACTTCTGCAATGGTGCGATCTTaGCTCACTGCAACATCCAAC +
Preference number: 4 (lower is better)
Translates to: PQCLWGLCSSCPVDLETSAMVRS*LTATSN
Trigger: GTTGGATGTTGCAGTGAGCCAAGATCGCACCATTGC...AGAAGTTTCTAGATCTACTGGGCATGATGAACACAAACCCCACAGACACTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp TCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGCCCTGCTGGTTGGGCTaGAAAGTCACAGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SFLGFNVSRYSNKAECVSPCWLG*KVTGEA
Trigger: AGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGG...CGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCGTGGCACATGGGGTaGGGACTCAGATGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFPWHMG*GLRCQE
Trigger: CTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGG...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTGGGCTGGGACAGGACTaGACGCCCACACGCACTTTC +
Preference number: 4 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFGLGQD*TPTRTF
Trigger: GAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCC...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTGCCATGCTCAGCTGCTaGATCTCCCGGCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFAMLSC*ISRPIS
Trigger: GGAGATCGGCCGGGAGATCCAGCAGCTGAGCATGGC...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTAGTCCAGGAGGTTCTTaGTGGCGCCGCTCTCCGCGA +
Preference number: 4 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFSPGGS*WRRSPR
Trigger: TCGCGGAGAGCGGCGCCACCAAGAACCTCCTGGACT...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACCGTTGATGACCTGCTaGATCAGATGGCCGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEPLMTC*IRWPPD
Trigger: GTCAGGCGGCCATCTGATCCAGCAGGTCATCAACGG...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR TCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAAAAAGCCCCAGAGACATaGGTGGGCTCAAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEKAPET*VGSSVS
Trigger: GGACACACTTGAGCCCACTCATGTCTCTGGGGCTTT...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR TCA 90 bp AAGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCACTCCTGGGCTCAAGTaGTCCTCCCAAAGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: KSFEMGSCDCYSSLKNPFTPGLK*SSQSVL
Trigger: CAACACACTTTGGGAGGATCACTTGAGCCCAGGAGT...GAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR TCA 90 bp TCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGAGAGCAAGGAGCTGCTaGAAACCATCCCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: SFLGFNVSRYSNKAECVSRARSC*KPSPLR
Trigger: CCTGAGTGGGGATGGTTTTCAGCAGCTCCTTGCTCT...CGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp GTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCTGCCACACATGTACATaGAAATTCCCATCCAGAATG +
Preference number: 4 (lower is better)
Translates to: VSRYSNKAECVSISPGTRCHTCT*KFPSRM
Trigger: CATTCTGGATGGGAATTTTCATGTACATGTGTGGCA...GCGCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGGGTCCCTCAGCCGCTTaGAGTGCTTCAACATGTCTG +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPGPSAA*SASTCL
Trigger: CAGACATGTTGAAGCACTGCAAGCGGCTGAGGGACC...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR GCA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCTGCGGAGAAGCGACTaGTGCAGGCTCTTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFLRRSD*CRLLQV
Trigger: CACCTGCAAGAGCCTGCAGCAGTCGCTTCTCCGCAG...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGTGGCGGAGGAGAAGTTaGACCCAATCAGCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPWRRRS*TQSARG
Trigger: ACCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCA...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAGTCACTGCCACCACTaGGTTCCTCAGTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPSHCHH*VPQCLW
Trigger: CCACAGACACTGAGGAACCCAGTGGTGGCAGTGACT...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTACAGAGCAGCGAGTCTaGGGACAGGCAGTGGACGCA +
Preference number: 4 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFTEQRV*GQAVDA
Trigger: TGCGTCCACTGCCTGTCCCCAGACTCGCTGCTCTGT...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR GCA 90 bp TCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGCTCAGCCGCTTGCAGTaGTTCAACATGTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SFLGFNVSRYSNKAECVSLSRLQ*FNMSES
Trigger: GCTCTCAGACATGTTGAAGCACTGCAAGCGGCTGAG...CGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp AGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCTCCCCAGAGACATGAGTaGGCTCAAGTGTGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: SHLKWGHVIATPALRILSPQRHE*AQVCPN
Trigger: ATTAGGACACACTTGAGCCCACTCATGTCTCTGGGG...AGAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CCA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTGCAGAAGGGTCCCTCTaGCCAGGAGGCAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFAEGSL*PGGKGS
Trigger: AGAACCTTTGCCTCCTGGCCAGAGGGACCCTTCTGC...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR TCA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTGCAACACGGTGTGGATaGGGCTCTTGTCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFATRCG*GSCQGT
Trigger: TGTGCCTTGACAAGAGCCTCATCCACACCGTGTTGC...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR GCA 90 bp ATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCATGGGGTCATGTGATTaGTACTCCAGCCTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: MFRVILTKPNVYRFPQERMGSCD*YSSLKN
Trigger: ATTCTTAAGGCTGGAGTAGCAATCACATGACCCCAT...GCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000453700.7
ENST00000620087.1
3UTR CAA 72 bp CTTTGGTTTAGTGGCCCCACACTTCATCACCTCACTTaGTCCATGAATTTCACACGTTTTCTTACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LWFSGPTLHHLT*SMNFTRFLTRA
Trigger: AGCTCTTGTAAGAAAACGTGTGAAATTCATGGACAAAGTGAGGTGATGAAGTGTGGGGCCACTAAACCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR GCA 90 bp AAGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCATGGGGTCATGTGATTaGTACTCCAGCCTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: KSFEMGSCDCYSSLKNPFMGSCD*YSSLKN
Trigger: ATTCTTAAGGCTGGAGTAGCAATCACATGACCCCAT...GAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000453700.7
ENST00000620087.1
CDS-3UTR GCA 90 bp TCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATGGGGTCATGTGATTaGTACTCCAGCCTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: SFLGFNVSRYSNKAECVSMGSCD*YSSLKN
Trigger: ATTCTTAAGGCTGGAGTAGCAATCACATGACCCCAT...CGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000453700.7
ENST00000620087.1
CDS-3UTR GCA 90 bp AGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCTGGTTTGTGTTCATCATaGCCAGTAGATCTAGAAACT +
Preference number: 4 (lower is better)
Translates to: SHLKWGHVIATPALRILSGLCSS*PVDLET
Trigger: AGTTTCTAGATCTACTGGGCATGATGAACACAAACC...AGAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CCA 90 bp ATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCCTTAAGAATCCTTTCTaGGTTTTAATGTTTCGCGTT +
Preference number: 4 (lower is better)
Translates to: MFRVILTKPNVYRFPQERLKNPF*VLMFRV
Trigger: AACGCGAAACATTAAAACCCAGAAAGGATTCTTAAG...GCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000453700.7
ENST00000620087.1
CDS-3UTR CCA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACTTAAGAATCCTTTCTaGGTTTTAATGTTTCGCGTT +
Preference number: 4 (lower is better)
Translates to: LMFRVILTKPNVYRFPQELKNPF*VLMFRV
Trigger: AACGCGAAACATTAAAACCCAGAAAGGATTCTTAAG...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000453700.7
ENST00000620087.1
CDS CCA 90 bp CGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGCACTGCGTGCATaGCCGGCTGGGCGGGCGCGCGGTCGGCGCGCGGCGCGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: RPHALSCQSRAALRA*PAGRARGRRAARSQ
Trigger: CTGACTCCGCGCCGCGCGCCGACCGCGCGCCCGCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
ENST00000620087.1
CDS CCA 90 bp CGCACTTTCTTGCCAAAGCCGCGCGGCACTGCGTGCATGGCCGGCTaGGCGGGCGCGCGGTCGGCGCGCGGCGCGGAGTCAGCGACAGAG +
Preference number: 5 (lower is better)
Translates to: RTFLPKPRGTACMAG*AGARSARGAESATE
Trigger: CTCTGTCGCTGACTCCGCGCCGCGCGCCGACCGCGCGCCCGCCCAGCCGGCCATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS-3UTR CAA 90 bp GAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGCTGGCCGGATGGCGGGCTCGTaGCGGGGCATGGCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ERAVETPGAPGARWGVAGRMAGS*RGMAEE
Trigger: CTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCG...GCCAGCCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS GCA 90 bp GGTCCGAACCGCGGCCGCGGGATCCGCAACCCCGTGCCTCCCACCTaGCCGGCTAGGGATGCTCGAAGCCGGCGCGTCCACCGCTCAACC +
Preference number: 5 (lower is better)
Translates to: GPNRGRGIRNPVPPT*PARDARSRRVHRST
Trigger: GGTTGAGCGGTGGACGCGCCGGCTTCGAGCATCCCTAGCCGGGCAGGTGGGAGGCACGGGGTTGCGGATCCCGCGGCCGCGGTTCGGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS CCA 90 bp CGGGCCAGGAGCTGGCAGAGGTGGCGGCCCAGGCCCTCCGAGCTGTaGTGGTGGGCGGCCGAGAGGTTCAGGTGGCGCAGGTTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: RARSWQRWRPRPSEL*WWAAERFRWRRLQQ
Trigger: CTGCTGCAACCTGCGCCACCTGAACCTCTCGGCCGCCCACCACCACAGCTCGGAGGGCCTGGGCCGCCACCTCTGCCAGCTCCTGGCCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS GCA 90 bp AGCCCGGAGCCCGTAAGGACGCTGGGCAGCTGTGCGAGCGTCAGGTaGCGCAGGAAGGCCAGCTGGCCGATGGCGGCCACCTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: SPEPVRTLGSCASVR*RRKASWPMAATSES
Trigger: GGACTCGGAGGTGGCCGCCATCGGCCAGCTGGCCTTCCTGCGGCACCTGACGCTCGCACAGCTGCCCAGCGTCCTTACGGGCTCCGGGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 90 bp CCCGCACGCGGCTCAGGGTGGCCTTGCACTCGCTGCTCAGCTGGCTaGCGTCGAAGCCGGGGCTCACGTCGATGGCCAGCGAGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: PARGSGWPCTRCSAG*RRSRGSRRWPASAG
Trigger: ACCTGCGCTCGCTGGCCATCGACGTGAGCCCCGGCTTCGACGCCAGCCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCCGCGTGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 90 bp AGCTCCCGCACGCGGCTCAGGGTGGCCTTGCACTCGCTGCTCAGCTaGCTGGCGTCGAAGCCGGGGCTCACGTCGATGGCCAGCGAGCGC +
Preference number: 5 (lower is better)
Translates to: SSRTRLRVALHSLLS*LASKPGLTSMASER
Trigger: GCGCTCGCTGGCCATCGACGTGAGCCCCGGCTTCGACGCCAGCCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCCGCGTGCGGGAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 90 bp AGGAGCTGGCAGAGGTGGCGGCCCAGGCCCTCCGAGCTGTGGTGGTaGGCGGCCGAGAGGTTCAGGTGGCGCAGGTTGCAGCAGGACGCC +
Preference number: 5 (lower is better)
Translates to: RSWQRWRPRPSELWW*AAERFRWRRLQQDA
Trigger: GGCGTCCTGCTGCAACCTGCGCCACCTGAACCTCTCGGCCGCCCACCACCACAGCTCGGAGGGCCTGGGCCGCCACCTCTGCCAGCTCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS CCA 90 bp GCCAGGAGCTGGCAGAGGTGGCGGCCCAGGCCCTCCGAGCTGTGGTaGTGGGCGGCCGAGAGGTTCAGGTGGCGCAGGTTGCAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: ARSWQRWRPRPSELW*WAAERFRWRRLQQD
Trigger: GTCCTGCTGCAACCTGCGCCACCTGAACCTCTCGGCCGCCCACCACCACAGCTCGGAGGGCCTGGGCCGCCACCTCTGCCAGCTCCTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS-3UTR CAA 90 bp GGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGCCCGTGGAGTCCAGGAGGTTCTaGGTGGCGCCGCTCTCCGCG +
Preference number: 5 (lower is better)
Translates to: GTRFPVGSGRGFGPSRPVESRRF*VAPLSA
Trigger: CGCGGAGAGCGGCGCCACCAAGAACCTCCTGGACTC...CACGGGCCTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp GAGAGAGCCGTGGAGACGCCGGGAGCCCCAGGAGCCAGGTGGGGCGTGGCTGGCTGGTGGAGCCGAGTGTaGCCTGGTGACGTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: ERAVETPGAPGARWGVAGWWSRV*PGDVEQ
Trigger: CTGCTCCACGTCACCAGGCAACACTCGGCTCCACCA...GCCAGCCACGCCCCACCTGGCTCCTGGGGCTCCCGGCGTCTCCACGGCTCTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS GCA 90 bp CCGAGTCCCCGACACTCTGTGCGCGGCTGCAGGGTGGGAGCGAGTTaGGGATGGCGGGCTCGTTGCGGGGCATGGCGGAGGAGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: PSPRHSVRGCRVGAS*GWRARCGAWRRRSW
Trigger: CCAACTTCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTGCAGCCGCGCACAGAGTGTCGGGGACTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS GCA 90 bp GCCGATATTGACCAGCCCGGAGCCCGTAAGGACGCTGGGCAGCTGTaGGAGCGTCAGGTGCCGCAGGAAGGCCAGCTGGCCGATGGCGGC +
Preference number: 5 (lower is better)
Translates to: ADIDQPGARKDAGQL*ERQVPQEGQLADGG
Trigger: GCCGCCATCGGCCAGCTGGCCTTCCTGCGGCACCTGACGCTCGCACAGCTGCCCAGCGTCCTTACGGGCTCCGGGCTGGTCAATATCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS-3UTR CAA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGCCCATCATGCCCAGGTaGGCCAGCGACAGGGACCGC +
Preference number: 5 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQPIMPR*ASDRDR
Trigger: GCGGTCCCTGTCGCTGGCCAACCTGGGCATGATGGG...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS GCA 90 bp CTGGCGTCGAAGCCGGGGCTCACGTCGATGGCCAGCGAGCGCAGGTaGTGCAGGGCCGAGAGCATCTTGGAGAGGCGCAGGGAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: LASKPGLTSMASERR*CRAESILERRREVR
Trigger: CCTCACTTCCCTGCGCCTCTCCAAGATGCTCTCGGCCCTGCAGCACCTGCGCTCGCTGGCCATCGACGTGAGCCCCGGCTTCGACGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 90 bp CCCCGACACTCTGTGCGCGGCTGCAGGGTGGGAGCGAGTTGCGGATaGCGGGCTCGTTGCGGGGCATGGCGGAGGAGAAGTTGGACCCAA +
Preference number: 5 (lower is better)
Translates to: PRHSVRGCRVGASCG*RARCGAWRRRSWTQ
Trigger: TTGGGTCCAACTTCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTGCAGCCGCGCACAGAGTGTCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 90 bp ACAACCTGCAGGCAGCGAGCCATGAAGGCCAGCACGGCATCGGGCTaGAGGGTGCCGCTGCGAGAGACCAGGCACAGGCGCTGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: TTCRQRAMKASTASG*RVPLRETRHRRCSE
Trigger: CTCGCTGCAGCGCCTGTGCCTGGTCTCTCGCAGCGGCACCCTCCAGCCCGATGCCGTGCTGGCCTTCATGGCTCGCTGCCTGCAGGTTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS-3UTR CAA 90 bp AGCCCGGCCGACTGGACTTCAGGGGGACAGCATGTGGCCGCCCATCCACGGGGCCCCACACGCACTTTCTaGCCAAAGCCGCGCGGCACT +
Preference number: 5 (lower is better)
Translates to: SPADWTSGGQHVAAHPRGPTRTF*PKPRGT
Trigger: AGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGG...GCCCCGTGGATGGGCGGCCACATGCTGTCCCCCTGAAGTCCAGTCGGCCGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS GCA 90 bp GTGCGCGGCTGCAGGGTGGGAGCGAGTTGCGGATGGCGGGCTCGTTaGGGGGCATGGCGGAGGAGAAGTTGGACCCAATCAGCTCGAGGT +
Preference number: 5 (lower is better)
Translates to: VRGCRVGASCGWRAR*GAWRRRSWTQSARG
Trigger: ACCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTGCAGCCGCGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 90 bp TGCTGCAGGGCCGAGAGCATCTTGGAGAGGCGCAGGGAAGTGAGGTaGCAGCCCGAGAGGTTCACCTTCACCAGGCTGCGGCAGCGGGCC +
Preference number: 5 (lower is better)
Translates to: CCRAESILERRREVR*QPERFTFTRLRQRA
Trigger: GGCCCGCTGCCGCAGCCTGGTGAAGGTGAACCTCTCGGGCTGCCACCTCACTTCCCTGCGCCTCTCCAAGATGCTCTCGGCCCTGCAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
CDS CCA 90 bp ACTCGCTGCTCAGCTGGCTGGCGTCGAAGCCGGGGCTCACGTCGATaGCCAGCGAGCGCAGGTGCTGCAGGGCCGAGAGCATCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: TRCSAGWRRSRGSRR*PASAGAAGPRASWR
Trigger: TCTCCAAGATGCTCTCGGCCCTGCAGCACCTGCGCTCGCTGGCCATCGACGTGAGCCCCGGCTTCGACGCCAGCCAGCTGAGCAGCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 90 bp ATGTCGTCCTCCGCCTTGCGGAGCAGCGAGTCTGGGGACAGGCAGTaGACGCAGCCGCTGAGGTTCAAGCTGGCCAGGCTCCGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: MSSSALRSSESGDRQ*TQPLRFKLARLRRS
Trigger: GGACCTGCGGAGCCTGGCCAGCTTGAACCTCAGCGGCTGCGTCCACTGCCTGTCCCCAGACTCGCTGCTCCGCAAGGCGGAGGACGACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS CCA 90 bp AGGTGCACCAGGGGGACGTCCCGGATGACGTCGGTCAGGCCCTCGTaGAGCAGAGGGAAGATGACGACGTTTAACGCGGGCCGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: RCTRGTSRMTSVRPS*SRGKMTTFNAGRSA
Trigger: GGCCGAGCGGCCCGCGTTAAACGTCGTCATCTTCCCTCTGCTCCACGAGGGCCTGACCGACGTCATCCGGGACGTCCCCCTGGTGCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CAA 90 bp CTGGCCCGAGAAGGGGCTGGGACAGGACTGCACGCCCACACGCACTTTCTTGCCGAGTCCAGGAGGTTCTaGGTGGCGCCGCTCTCCGCG +
Preference number: 5 (lower is better)
Translates to: LAREGAGTGLHAHTHFLAESRRF*VAPLSA
Trigger: CGCGGAGAGCGGCGCCACCAAGAACCTCCTGGACTC...GGCAAGAAAGTGCGTGTGGGCGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CAA 90 bp GGGCCTAGGGGTGTGGCTCTCACAGGCCATGACAGGAGGGCCAGGAGGCCTCTGCTGGGAGGCGAAGGCTaGGTCTGGTGTGGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: GPRGVALTGHDRRARRPLLGGEG*VWCGSH
Trigger: GTGGGACCCACACCAGACCAAGCCTTCGCCTCCCAG...CAGAGGCCTCCTGGCCCTCCTGTCATGGCCTGTGAGAGCCACACCCCTAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp AGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGCCCGTACGGGGACAGGGAGGTaGGTCATCGAAAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: RDTLPGRKWQGVRALQARTGTGR*VIERQV
Trigger: CACCTGCCTTTCGATGACCAACCTCCCTGTCCCCGT...ACGGGCCTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS GCA 90 bp GGTGGCGCAGGTTGCAGCAGGACGCCACCAGAGTCTCCAGGATGCTaGTGTCGATGTCGTCCTCCGCCTTGCGGAGCAGCGAGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: GGAGCSRTPPESPGC*CRCRPPPCGAASLG
Trigger: CCCCAGACTCGCTGCTCCGCAAGGCGGAGGACGACATCGACAGCAGCATCCTGGAGACTCTGGTGGCGTCCTGCTGCAACCTGCGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS GCA 90 bp CAGGTGGCGAGGGACTCCCCGGTGAACAGGTGGCACATGACAACCTaGAGGCAGCGAGCCATGAAGGCCAGCACGGCATCGGGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: QVARDSPVNRWHMTT*RQRAMKASTASGWR
Trigger: CCTCCAGCCCGATGCCGTGCTGGCCTTCATGGCTCGCTGCCTGCAGGTTGTCATGTGCCACCTGTTCACCGGGGAGTCCCTCGCCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 90 bp AGGAAGGGCAGGTTCTTCAGCAGAGACCAGAACACGGAGGAGGGCTaGGGGCACGCCTGGCCCGAGAAGGGGCTGGGACAGGACTGCACG +
Preference number: 5 (lower is better)
Translates to: RKGRFFSRDQNTEEG*GHAWPEKGLGQDCT
Trigger: CGTGCAGTCCTGTCCCAGCCCCTTCTCGGGCCAGGCGTGCCCCCAGCCCTCCTCCGTGTTCTGGTCTCTGCTGAAGAACCTGCCCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS CCA 90 bp GACAGCCAGCGGCCGACCGCAAGGACAACAGACTACCCCAGAGTCTaGCAAGCAGGGTTGTCGGCGCCCAGTGGCTCGAGACGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: DSQRPTARTTDYPRV*QAGLSAPSGSRRPG
Trigger: GCCAGGACGTCTCGAGCCACTGGGCGCCGACAACCCTGCTTGCCAGACTCTGGGGTAGTCTGTTGTCCTTGCGGTCGGCCGCTGGCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp CGGGCCCTCCAGGCCCGTGGACAGGGCCCCCAGGGATTGCGGCTCAGTATACAACACTGCAGGCCGATATaGACCAGCCCGGAGCCCGTA +
Preference number: 5 (lower is better)
Translates to: RALQARGQGPQGLRLSIQHCRPI*TSPEPV
Trigger: TACGGGCTCCGGGCTGGTCAATATCGGCCTGCAGTG...TTGTATACTGAGCCGCAATCCCTGGGGGCCCTGTCCACGGGCCTGGAGGGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CAA 90 bp GGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGGCCCGTGAGGTCCCTCAGCCGCTaGCAGTGCTTCAACATGTCT +
Preference number: 5 (lower is better)
Translates to: GTRFPVGSGRGFGPSRPVRSLSR*QCFNMS
Trigger: AGACATGTTGAAGCACTGCAAGCGGCTGAGGGACCT...CACGGGCCTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS GCA 90 bp CCACGTGTTCCACGGTGGAGCCAGGCAGCCAGTAGCAGCCAGCCATaGTCAGCTGCTGGATCTCCCGGCCGATCTCCTTCACCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PRVPRWSQAASSSQP*SAAGSPGRSPSPAA
Trigger: GGCAGCTGGTGAAGGAGATCGGCCGGGAGATCCAGCAGCTGAGCATGGCTGGCTGCTACTGGCTGCCTGGCTCCACCGTGGAACACGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
CDS GCA 90 bp CGTTCAGCCAGGACTTGGGCAGCTGCAGGGCATCCAGCACGACATTaGGCGCCATGGAGTCCAGGAGGTTCTTGGTGGCGCCGCTCTCCG +
Preference number: 5 (lower is better)
Translates to: RSARTWAAAGHPARH*APWSPGGSWWRRSP
Trigger: CGGAGAGCGGCGCCACCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCGTGCTGGATGCCCTGCAGCTGCCCAAGTCCTGGCTGAACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS GCA 90 bp CCGAGCTGTGGTGGTGGGCGGCCGAGAGGTTCAGGTGGCGCAGGTTaGAGCAGGACGCCACCAGAGTCTCCAGGATGCTGCTGTCGATGT +
Preference number: 5 (lower is better)
Translates to: PSCGGGRPRGSGGAG*SRTPPESPGCCCRC
Trigger: ACATCGACAGCAGCATCCTGGAGACTCTGGTGGCGTCCTGCTGCAACCTGCGCCACCTGAACCTCTCGGCCGCCCACCACCACAGCTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS GCA 90 bp ATCATGCCCAGGTTGGCCAGCGACAGGGACCGCAACTGCTGGCACTaGAGGCCGATATTGACCAGCCCGGAGCCCGTAAGGACGCTGGGC +
Preference number: 5 (lower is better)
Translates to: IMPRLASDRDRNCWH*RPILTSPEPVRTLG
Trigger: GCCCAGCGTCCTTACGGGCTCCGGGCTGGTCAATATCGGCCTGCAGTGCCAGCAGTTGCGGTCCCTGTCGCTGGCCAACCTGGGCATGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 90 bp AGGACTTGGGCAGCTGCAGGGCATCCAGCACGACATTGCGCGCCATaGAGTCCAGGAGGTTCTTGGTGGCGCCGCTCTCCGCGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: RTWAAAGHPARHCAP*SPGGSWWRRSPRSC
Trigger: GCAGCTTCGCGGAGAGCGGCGCCACCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCGTGCTGGATGCCCTGCAGCTGCCCAAGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 90 bp GATGCTGCTGTCGATGTCGTCCTCCGCCTTGCGGAGCAGCGAGTCTaGGGACAGGCAGTGGACGCAGCCGCTGAGGTTCAAGCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: DAAVDVVLRLAEQRV*GQAVDAAAEVQAGQ
Trigger: CTGGCCAGCTTGAACCTCAGCGGCTGCGTCCACTGCCTGTCCCCAGACTCGCTGCTCCGCAAGGCGGAGGACGACATCGACAGCAGCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS-3UTR CAA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCCGGATGGCGGGCTCGTaGCGGGGCATGGCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTRMAGS*RGMAEE
Trigger: CTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCG...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCGGATGGCGGGCTCGTaGCGGGGCATGGCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRMAGS*RGMAEE
Trigger: CTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp CGGGCCCTCCAGGCCCGTGGACAGGGCCCCCAGGGATTGCGGCTCAGTATACAACAGGGCCCCCAGGGATaGCGGCTCAGTATACAAACC +
Preference number: 5 (lower is better)
Translates to: RALQARGQGPQGLRLSIQQGPQG*RLSIQT
Trigger: GGTTTGTATACTGAGCCGCAATCCCTGGGGGCCCTG...TTGTATACTGAGCCGCAATCCCTGGGGGCCCTGTCCACGGGCCTGGAGGGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS GCA 90 bp TCAGGTGGCGCAGGTTGCAGCAGGACGCCACCAGAGTCTCCAGGATaGTGCTGTCGATGTCGTCCTCCGCCTTGCGGAGCAGCGAGTCTG +
Preference number: 5 (lower is better)
Translates to: SGGAGCSRTPPESPG*CCRCRPPPCGAASL
Trigger: CAGACTCGCTGCTCCGCAAGGCGGAGGACGACATCGACAGCAGCATCCTGGAGACTCTGGTGGCGTCCTGCTGCAACCTGCGCCACCTGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS GCA 90 bp ACCTTCCCCATCATGCCCAGGTTGGCCAGCGACAGGGACCGCAACTaGTGGCACTGCAGGCCGATATTGACCAGCCCGGAGCCCGTAAGG +
Preference number: 5 (lower is better)
Translates to: TFPIMPRLASDRDRN*WHCRPILTSPEPVR
Trigger: CCTTACGGGCTCCGGGCTGGTCAATATCGGCCTGCAGTGCCAGCAGTTGCGGTCCCTGTCGCTGGCCAACCTGGGCATGATGGGGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 90 bp TGCAGGGTGGGAGCGAGTTGCGGATGGCGGGCTCGTTGCGGGGCATaGCGGAGGAGAAGTTGGACCCAATCAGCTCGAGGTGTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: CRVGASCGWRARCGA*RRRSWTQSARGVPG
Trigger: TCCTGGAACACCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 90 bp TTCCCCATCATGCCCAGGTTGGCCAGCGACAGGGACCGCAACTGCTaGCACTGCAGGCCGATATTGACCAGCCCGGAGCCCGTAAGGACG +
Preference number: 5 (lower is better)
Translates to: FPIMPRLASDRDRNC*HCRPILTSPEPVRT
Trigger: CGTCCTTACGGGCTCCGGGCTGGTCAATATCGGCCTGCAGTGCCAGCAGTTGCGGTCCCTGTCGCTGGCCAACCTGGGCATGATGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 90 bp TGCTGCAGGCTCTTGCAGGTGGCGAGGGACTCCCCGGTGAACAGGTaGCACATGACAACCTGCAGGCAGCGAGCCATGAAGGCCAGCACG +
Preference number: 5 (lower is better)
Translates to: CCRLLQVARDSPVNR*HMTTCRQRAMKAST
Trigger: CGTGCTGGCCTTCATGGCTCGCTGCCTGCAGGTTGTCATGTGCCACCTGTTCACCGGGGAGTCCCTCGCCACCTGCAAGAGCCTGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS-3UTR CAA 90 bp CAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCCTCCAGTGGGGTATCCCTGTGTaGCCCAGGCTGATCTCAAAC +
Preference number: 5 (lower is better)
Translates to: QPRDTLPGRKWQGVRALQWGIPV*PRLISN
Trigger: GTTTGAGATCAGCCTGGGCAACACAGGGATACCCCA...CTGGAGGGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp AAACTTCACAGAGCAACAGTCCCCATGAGAGAGCCGTGGAGACGCCGGGAGCCCGGACCCAGGGTGTGGTaGAGGGAGGGCGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: KLHRATVPMREPWRRREPGPRVW*REGAAE
Trigger: CTCAGCAGCGCCCTCCCTCAACCACACCCTGGGTCC...GGGCTCCCGGCGTCTCCACGGCTCTCTCATGGGGACTGTTGCTCTGTGAAGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS TCA 90 bp TGGCAAGCAGGGTTGTCGGCGCCCAGTGGCTCGAGACGTCCTGGCTaGTGGCTCTTCTCGCAACTCTGTGAACAGCTGGGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: WQAGLSAPSGSRRPG*WLFSQLCEQLGPPS
Trigger: GGAAGGAGGCCCCAGCTGTTCACAGAGTTGCGAGAAGAGCCATCAGCCAGGACGTCTCGAGCCACTGGGCGCCGACAACCCTGCTTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp AGAAGCGGCCACCGTGGCACATGGGGTGAGGACTCAGATGCCAGGAGGATGTCCAGGGCCGAGAGCATCTaGGAGAGGCGCAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: RSGHRGTWGEDSDARRMSRAESI*ERRREV
Trigger: CACTTCCCTGCGCCTCTCCAAGATGCTCTCGGCCCT...GGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCGGCTCAGGGTGGCCTaGCACTCGCTGCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRLRVA*HSLLSW
Trigger: CCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCCG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCGAGTCCAGGAGGTTCTaGGTGGCGCCGCTCTCCGCG +
Preference number: 5 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTESRRF*VAPLSA
Trigger: CGCGGAGAGCGGCGCCACCAAGAACCTCCTGGACTC...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGAGTCCAGGAGGTTCTaGGTGGCGCCGCTCTCCGCG +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACESRRF*VAPLSA
Trigger: CGCGGAGAGCGGCGCCACCAAGAACCTCCTGGACTC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp AGCCACTGCGCCCGGCCAGATCTAGAAACTTCTAACTTGAATCCCACACCCCCACGGATGGCGGGCTCGTaGCGGGGCATGGCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SHCARPDLETSNLNPTPPRMAGS*RGMAEE
Trigger: CTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCG...TGGGGGTGTGGGATTCAAGTTAGAAGTTTCTAGATCTGGCCGGGCGCAGTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCAGGGTGGGAGCGAGTaGCGGATGGCGGGCTCGTTG +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACQGGSE*RMAGSL
Trigger: CAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCCCATCATGCCCAGGTaGGCCAGCGACAGGGACCGC +
Preference number: 5 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNPIMPR*ASDRDR
Trigger: GCGGTCCCTGTCGCTGGCCAACCTGGGCATGATGGG...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCCCATCATGCCCAGGTaGGCCAGCGACAGGGACCGC +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACPIMPR*ASDRDR
Trigger: GCGGTCCCTGTCGCTGGCCAACCTGGGCATGATGGG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp GTGACCACAAACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGACTGCTGCAGGCTCTaGCAGGTGGCGAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: VTTNTTAKGHASRSEVAGDCCRL*QVARDS
Trigger: GGAGTCCCTCGCCACCTGCAAGAGCCTGCAGCAGTC...CCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGTTTGTGGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGTCTGGCAAGCAGGGTaGTCGGCGCCCAGTGGCTCG +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACVWQAG*SAPSGS
Trigger: CGAGCCACTGGGCGCCGACAACCCTGCTTGCCAGAC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCCCGGGAGGCAGAGCTaGCAGCGAGCCGAGATCACG +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACPGRQS*QRAEIT
Trigger: CGTGATCTCGGCTCGCTGCAAGCTCTGCCTCCCGGG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS GCA 90 bp TTCAAGCTGGCCAGGCTCCGCAGGTCCTTCCCGCCGTTGATGACCTaGTGGATCAGATGGCCGCCTGACAGGGTACAGCGGCTGAAACTG +
Preference number: 5 (lower is better)
Translates to: FKLARLRRSFPPLMT*WIRWPPDRVQRLKL
Trigger: CAGTTTCAGCCGCTGTACCCTGTCAGGCGGCCATCTGATCCAGCAGGTCATCAACGGCGGGAAGGACCTGCGGAGCCTGGCCAGCTTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 90 bp AAGCTGGCCAGGCTCCGCAGGTCCTTCCCGCCGTTGATGACCTGCTaGATCAGATGGCCGCCTGACAGGGTACAGCGGCTGAAACTGAAG +
Preference number: 5 (lower is better)
Translates to: KLARLRRSFPPLMTC*IRWPPDRVQRLKLK
Trigger: CTTCAGTTTCAGCCGCTGTACCCTGTCAGGCGGCCATCTGATCCAGCAGGTCATCAACGGCGGGAAGGACCTGCGGAGCCTGGCCAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS-3UTR CAA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCAGGGCCGAGAGCATCTaGGAGAGGCGCAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCRAESI*ERRREV
Trigger: CACTTCCCTGCGCCTCTCCAAGATGCTCTCGGCCCT...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACGTGAACAGCGTCTGCTaGAGCTCCCGCACGCGGCTC +
Preference number: 5 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNVNSVC*SSRTRL
Trigger: GAGCCGCGTGCGGGAGCTCAAGCAGACGCTGTTCAC...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGTGAACAGCGTCTGCTaGAGCTCCCGCACGCGGCTC +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACVNSVC*SSRTRL
Trigger: GAGCCGCGTGCGGGAGCTCAAGCAGACGCTGTTCAC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCGCATCCAGCACGACATaGCGCGCCATGGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCASSTT*RAMESR
Trigger: CCTGGACTCCATGGCGCGCAATGTCGTGCTGGATGC...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCCCGTTCAGCCAGGACTaGGGCAGCTGCAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTPFSQD*GSCRAS
Trigger: GGATGCCCTGCAGCTGCCCAAGTCCTGGCTGAACGG...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGCCGTTCAGCCAGGACTaGGGCAGCTGCAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: AECVSISPGTRMDLPREGPFSQD*GSCRAS
Trigger: GGATGCCCTGCAGCTGCCCAAGTCCTGGCTGAACGG...CCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCCGTTCAGCCAGGACTaGGGCAGCTGCAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACPFSQD*GSCRAS
Trigger: GGATGCCCTGCAGCTGCCCAAGTCCTGGCTGAACGG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp GGACTGCACGCCCACACGCACTTTCTTGCCAAAGCCGCGCGGCACTGCGTGCATAGGTCCTTCCCGCCGTaGATGACCTGCTGGATCAGA +
Preference number: 5 (lower is better)
Translates to: GLHAHTHFLAKAARHCVHRSFPP*MTCWIR
Trigger: TCTGATCCAGCAGGTCATCAACGGCGGGAAGGACCT...ATGCACGCAGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGGCGTGCAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCATGTCGTCCTCCGCCTaGCGGAGCAGCGAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACMSSSA*RSSESG
Trigger: CCCAGACTCGCTGCTCCGCAAGGCGGAGGACGACAT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAGGGTGGGAGCGAGTaGCGGATGGCGGGCTCGTTG +
Preference number: 5 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLQGGSE*RMAGSL
Trigger: CAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTG...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp AATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCACAGGGTGGGAGCGAGTaGCGGATGGCGGGCTCGTTG +
Preference number: 5 (lower is better)
Translates to: NGMESPKSAATKLAGPSPQGGSE*RMAGSL
Trigger: CAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTG...TGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CAA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCGACTGCTGCAGGCTCTaGCAGGTGGCGAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTDCCRL*QVARDS
Trigger: GGAGTCCCTCGCCACCTGCAAGAGCCTGCAGCAGTC...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGACTGCTGCAGGCTCTaGCAGGTGGCGAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACDCCRL*QVARDS
Trigger: GGAGTCCCTCGCCACCTGCAAGAGCCTGCAGCAGTC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp AGAAGCGGCCACCGTGGCACATGGGGTGAGGACTCAGATGCCAGGAGGATGTCCGCCGAGCTCTGCCAATaGGGGACCATTAGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: RSGHRGTWGEDSDARRMSAELCQ*GTIRVG
Trigger: ACCCACCCTAATGGTCCCCAATTGGCAGAGCTCGGC...GGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp CTCCAGGCCCGTGGACAGGGCCCCCAGGGATTGCGGCTCAGTATACAAACCCCCGGGCTGGACGGGCCGTaGAAAACAAGAAAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LQARGQGPQGLRLSIQTPGLDGP*KTRKAF
Trigger: GAAGGCTTTTCTTGTTTTCAACGGCCCGTCCAGCCC...GGGGGTTTGTATACTGAGCCGCAATCCCTGGGGGCCCTGTCCACGGGCCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp AATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGGTCTGGAGCTTCATaGGCCGGCAGGGGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: NGMESPKSAATKLAGPSPWSGAS*AGRGPA
Trigger: GGCTGGGCCCCTGCCGGCCAATGAAGCTCCAGACCA...TGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS GCA 90 bp TCAACATGTCTGAGAGCGCGGGCATGTACACCACCTTCCCCATCATaGCCAGGTTGGCCAGCGACAGGGACCGCAACTGCTGGCACTGCA +
Preference number: 5 (lower is better)
Translates to: STCLRARACTPPSPS*PGWPATGTATAGTA
Trigger: TGCAGTGCCAGCAGTTGCGGTCCCTGTCGCTGGCCAACCTGGGCATGATGGGGAAGGTGGTGTACATGCCCGCGCTCTCAGACATGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS GCA 90 bp GGTTCCTCGGCCACTCTGCTCTTAAATAAGGTGATCTCATCCAGGTaGACCAGGGGGACGTCCCGGATGACGTCGGTCAGGCCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: GSSATLLLNKVISSR*TRGTSRMTSVRPSW
Trigger: CCACGAGGGCCTGACCGACGTCATCCGGGACGTCCCCCTGGTGCACCTGGATGAGATCACCTTATTTAAGAGCAGAGTGGCCGAGGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS CCA 90 bp AGTTGCGGATGGCGGGCTCGTTGCGGGGCATGGCGGAGGAGAAGTTaGACCCAATCAGCTCGAGGTGTTCCAGGAAGGGCAGGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SCGWRARCGAWRRRS*TQSARGVPGRAGSS
Trigger: TGAAGAACCTGCCCTTCCTGGAACACCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS-3UTR CAA 90 bp GCCGAATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGAGGGCCGAGAGCATCTaGGAGAGGCGCAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: AECVSISPGTRMDLPREGRAESI*ERRREV
Trigger: CACTTCCCTGCGCCTCTCCAAGATGCTCTCGGCCCT...CCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACATTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAGGGCCGAGAGCATCTaGGAGAGGCGCAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRAESI*ERRREV
Trigger: CACTTCCCTGCGCCTCTCCAAGATGCTCTCGGCCCT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCGCATCCAGCACGACATaGCGCGCCATGGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACASSTT*RAMESR
Trigger: CCTGGACTCCATGGCGCGCAATGTCGTGCTGGATGC...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp AGACACATCAGCACAGCGGTCCAGGCTCTGGCTCACTCCCCGGGAGGCTTCTGTAGGTCCTTCCCGCCGTaGATGACCTGCTGGATCAGA +
Preference number: 5 (lower is better)
Translates to: RHISTAVQALAHSPGGFCRSFPP*MTCWIR
Trigger: TCTGATCCAGCAGGTCATCAACGGCGGGAAGGACCT...ACAGAAGCCTCCCGGGGAGTGAGCCAGAGCCTGGACCGCTGTGCTGATGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATATGTCGTCCTCCGCCTaGCGGAGCAGCGAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: MGWRVPSLQPLNWQALPHMSSSA*RSSESG
Trigger: CCCAGACTCGCTGCTCCGCAAGGCGGAGGACGACAT...ATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCCCACACGCACTTTCTaGCCAAAGCCGCGCGGCACT +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACPTRTF*PKPRGT
Trigger: AGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCACTGCAGGCCGATATaGACCAGCCCGGAGCCCGTA +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACHCRPI*TSPEPV
Trigger: TACGGGCTCCGGGCTGGTCAATATCGGCCTGCAGTG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp ACACAACAGCCAAGGGACACGCTTCCCGGTCGGAAGTGGCAGGGGGTTCGGGCCTTCCCCATGTCACACTaGACCATGCAAGGGGACACT +
Preference number: 5 (lower is better)
Translates to: TQQPRDTLPGRKWQGVRAFPMSH*TMQGDT
Trigger: AGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAA...GGCCCGAACCCCCTGCCACTTCCGACCGGGAAGCGTGTCCCTTGGCTGTTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS GCA 90 bp AACCCTAGGAGGTGGACCCCGTCTGCCATCCCGGCTGCTGCAGGGTaGATGTCATCATCATCATTGGATATGTCCTCTCCGGAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: NPRRWTPSAIPAAAG*MSSSSLDMSSPELA
Trigger: GGCCAGCTCCGGAGAGGACATATCCAATGATGATGATGACATGCACCCTGCAGCAGCCGGGATGGCAGACGGGGTCCACCTCCTAGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
CDS-3UTR CAA 90 bp CCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTTGCTGCAGGCTGCGTGTGGATGAGGCTCTaGTCAAGGCACAGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: PGTHRALRWGLVPVAAGCVWMRL*SRHRAA
Trigger: TGCAGCCCTGTGCCTTGACAAGAGCCTCATCCACAC...GCAGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp ATGTGTATCGATTTCCCCAGGAACGCGCATGGACCTTCCCAGGGAAGGGCAGGTGCATCCAGCACGACATaGCGCGCCATGGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: MCIDFPRNAHGPSQGRAGASSTT*RAMESR
Trigger: CCTGGACTCCATGGCGCGCAATGTCGTGCTGGATGC...ACCTGCCCTTCCCTGGGAAGGTCCATGCGCGTTCCTGGGGAAATCGATACACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS-3UTR CAA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTCCCACACGCACTTTCTaGCCAAAGCCGCGCGGCACT +
Preference number: 5 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSPTRTF*PKPRGT
Trigger: AGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGG...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCACTGCAGGCCGATATaGACCAGCCCGGAGCCCGTA +
Preference number: 5 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLHCRPI*TSPEPV
Trigger: TACGGGCTCCGGGCTGGTCAATATCGGCCTGCAGTG...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATCACTGCAGGCCGATATaGACCAGCCCGGAGCCCGTA +
Preference number: 5 (lower is better)
Translates to: MGWRVPSLQPLNWQALPHHCRPI*TSPEPV
Trigger: TACGGGCTCCGGGCTGGTCAATATCGGCCTGCAGTG...ATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CAA 90 bp AGCCCGGCCGACTGGACTTCAGGGGGACAGCATGTGGCCGCCCATCCACGGGGCCTTCATCACCTCACTTaGTCCATGAATTTCACACGT +
Preference number: 5 (lower is better)
Translates to: SPADWTSGGQHVAAHPRGLHHLT*SMNFTR
Trigger: ACGTGTGAAATTCATGGACAAAGTGAGGTGATGAAG...GCCCCGTGGATGGGCGGCCACATGCTGTCCCCCTGAAGTCCAGTCGGCCGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp AGAAGCGGCCACCGTGGCACATGGGGTGAGGACTCAGATGCCAGGAGGATGTCCCGCCTGATAGTCCTTTaGCAGCAACACGGTGTGGAT +
Preference number: 5 (lower is better)
Translates to: RSGHRGTWGEDSDARRMSRLIVL*QQHGVD
Trigger: ATCCACACCGTGTTGCTGCAAAAGGACTATCAGGCG...GGACATCCTCCTGGCATCTGAGTCCTCACCCCATGTGCCACGGTGGCCGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp ATGTCGTGTCATTTAGCACCTGGTCATGAGATACGGCGAGACCCCCAGGTCCAGGCATCCAGCACGACATaGCGCGCCATGGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: MSCHLAPGHEIRRDPQVQASSTT*RAMESR
Trigger: CCTGGACTCCATGGCGCGCAATGTCGTGCTGGATGC...CTGGACCTGGGGGTCTCGCCGTATCTCATGACCAGGTGCTAAATGACACGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAGGTCCTTCCCGCCGTaGATGACCTGCTGGATCAGA +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRSFPP*MTCWIR
Trigger: TCTGATCCAGCAGGTCATCAACGGCGGGAAGGACCT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCATGGCGGAGGAGAAGTaGGACCCAATCAGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACMAEEK*DPISSR
Trigger: CCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCAT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp GCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCCAAATGGCGGAGGAGAAGTaGGACCCAATCAGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: ALLVGLKSHRRGSNQQSQMAEEK*DPISSR
Trigger: CCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCAT...TTGGGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CAA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCTTTACGGTGGGGCCTaGTTCCAGTTGCTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNLYGGA*FQLLQA
Trigger: AGCCTGCAGCAACTGGAACAAGGCCCCACCGTAAAG...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTAGGTCCTTCCCGCCGTaGATGACCTGCTGGATCAGA +
Preference number: 5 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLRSFPP*MTCWIR
Trigger: TCTGATCCAGCAGGTCATCAACGGCGGGAAGGACCT...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTATGGCGGAGGAGAAGTaGGACCCAATCAGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLMAEEK*DPISSR
Trigger: CCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCAT...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp GGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGTAGGTCCCTCAGCCGCTaGCAGTGCTTCAACATGTCT +
Preference number: 5 (lower is better)
Translates to: GMESPKSAATKLAGPSPCRSLSR*QCFNMS
Trigger: AGACATGTTGAAGCACTGCAAGCGGCTGAGGGACCT...ACATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CAA 90 bp CAGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACAGGTCCCTCAGCCGCTaGCAGTGCTTCAACATGTCT +
Preference number: 5 (lower is better)
Translates to: QLLQAAIPEGRGTSCLFNRSLSR*QCFNMS
Trigger: AGACATGTTGAAGCACTGCAAGCGGCTGAGGGACCT...GTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAGGTCCCTCAGCCGCTaGCAGTGCTTCAACATGTCT +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACRSLSR*QCFNMS
Trigger: AGACATGTTGAAGCACTGCAAGCGGCTGAGGGACCT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp AATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCAGCTGGCAGGCAACCCTaGTGTGTTTGCAGCGCAAGA +
Preference number: 5 (lower is better)
Translates to: NGMESPKSAATKLAGPSPAGRQP*CVCSAR
Trigger: TCTTGCGCTGCAAACACACAAGGGTTGCCTGCCAGC...TGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp CTCCAGGCCCGTGGACAGGGCCCCCAGGGATTGCGGCTCAGTATACAAACCCCCCTAGAAACTTCTAACTaGAATCCCACACCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: LQARGQGPQGLRLSIQTPLETSN*NPTPPS
Trigger: ACTTGGGGGTGTGGGATTCAAGTTAGAAGTTTCTAG...GGGGGTTTGTATACTGAGCCGCAATCCCTGGGGGCCCTGTCCACGGGCCTGGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCAGCTACTTGGGAGGTaGAGGCAGGAGAATGTCGTG +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACQLLGR*RQENVV
Trigger: CACGACATTCTCCTGCCTCAACCTCCCAAGTAGCTG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS TCA 90 bp TGTCCTCGCTCGCCTGATAGTCCTTTTGCAGCAACACGGTGTGGATaGGGCTCTTGTCAAGGCACAGGGCTGCAAGCTTCCGACAGGTAC +
Preference number: 5 (lower is better)
Translates to: CPRSPDSPFAATRCG*GSCQGTGLQASDRY
Trigger: GTACCTGTCGGAAGCTTGCAGCCCTGTGCCTTGACAAGAGCCTCATCCACACCGTGTTGCTGCAAAAGGACTATCAGGCGAGCGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
CDS TCA 90 bp CAGGTCCTTCCCGCCGTTGATGACCTGCTGGATCAGATGGCCGCCTaGCAGGGTACAGCGGCTGAAACTGAAGTAGAACGGGTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: QVLPAVDDLLDQMAA*QGTAAETEVERVVE
Trigger: TTCAACAACCCGTTCTACTTCAGTTTCAGCCGCTGTACCCTGTCAGGCGGCCATCTGATCCAGCAGGTCATCAACGGCGGGAAGGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS-3UTR CAA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGCGGCTCAGGGTGGCCTaGCACTCGCTGCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWRLRVA*HSLLSW
Trigger: CCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCCG...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp GCCAAGTGTTCTGACAGGCGGTTTTCCCGTAAACCGACCCCTTCAGCGTTTCTGCCCAGAAAGGCAGCTTaGCTCTGGGTCATCAGGCTC +
Preference number: 5 (lower is better)
Translates to: AKCSDRRFSRKPTPSAFLPRKAA*LWVIRL
Trigger: GAGCCTGATGACCCAGAGCAAAGCTGCCTTTCTGGG...CAGAAACGCTGAAGGGGTCGGTTTACGGGAAAACCGCCTGTCAGAACACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp CCCTTCCCCATGTCACACTTGACCATGCAAGGGGACACTCAGATACACGGTGACTCTGGTGGCAACAGCTaGGAGAAAAGCCTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: PFPMSHLTMQGDTQIHGDSGGNS*EKSLPG
Trigger: TCCCGGGAGGCTTTTCTCCAAGCTGTTGCCACCAGA...GTCACCGTGTATCTGAGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS GCA 90 bp TTGCAGCAACACGGTGTGGATGAGGCTCTTGTCAAGGCACAGGGCTaGAAGCTTCCGACAGGTACGCCGGACGTTCAGAATCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: LQQHGVDEALVKAQG*KLPTGTPDVQNQIC
Trigger: ACAGATCTGATTCTGAACGTCCGGCGTACCTGTCGGAAGCTTGCAGCCCTGTGCCTTGACAAGAGCCTCATCCACACCGTGTTGCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
CDS-3UTR CAA 90 bp GTGAGCCACCACGCCCAGCAGAGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCGCCTGATAGTCCTTTaGCAGCAACACGGTGTGGAT +
Preference number: 5 (lower is better)
Translates to: VSHHAQQSFVSQSRSWGLRLIVL*QQHGVD
Trigger: ATCCACACCGTGTTGCTGCAAAAGGACTATCAGGCG...AAGCCCCCAACTTCTAGATTGGGAAACGAAGCTCTGCTGGGCGTGGTGGCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp AGCTTCGTTTCCCAATCTAGAAGTTGGGGGCTTCAAACAACAGAAACTGGCTGGATGTCGTCCTCCGCCTaGCGGAGCAGCGAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: SFVSQSRSWGLQTTETGWMSSSA*RSSESG
Trigger: CCCAGACTCGCTGCTCCGCAAGGCGGAGGACGACAT...CCAGCCAGTTTCTGTTGTTTGAAGCCCCCAACTTCTAGATTGGGAAACGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp GCTCTAAGTCAGAGGATGGTTGCAGGGGACACTAAAAATACAAGGTCCACTGTTCAGGGTGGGAGCGAGTaGCGGATGGCGGGCTCGTTG +
Preference number: 5 (lower is better)
Translates to: ALSQRMVAGDTKNTRSTVQGGSE*RMAGSL
Trigger: CAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTG...AACAGTGGACCTTGTATTTTTAGTGTCCCCTGCAACCATCCTCTGACTTAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp GCCCTGCTGGTTGGGCTGAAAAGTCACAGGAGAGGCTCCAACCAGCAGTCCCAACAGTGTCTGTGGGGTTaGTGTTCATCATGCCCAGTA +
Preference number: 5 (lower is better)
Translates to: ALLVGLKSHRRGSNQQSQQCLWG*CSSCPV
Trigger: TACTGGGCATGATGAACACAAACCCCACAGACACTG...TTGGGACTGCTGGTTGGAGCCTCTCCTGTGACTTTTCAGCCCAACCAGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp AGTTGCTGCAGGCTGCCATTCCTGAAGGTCGGGGGACAAGCTGCCTCTTCAACCATGTGCAGGCTGGTCTaGAACTTCTGGCTTCAAGCA +
Preference number: 5 (lower is better)
Translates to: SCCRLPFLKVGGQAASSTMCRLV*NFWLQA
Trigger: TGCTTGAAGCCAGAAGTTCAAGACCAGCCTGCACAT...GGTTGAAGAGGCAGCTTGTCCCCCGACCTTCAGGAATGGCAGCCTGCAGCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS GCA 90 bp CTGCAAGCTTCCGACAGGTACGCCGGACGTTCAGAATCAGATCTGTaGTGGGGACGTGACTCAGGATGTGAAGGAGGATCTCATCAGAGA +
Preference number: 5 (lower is better)
Translates to: LQASDRYAGRSESDL*WGRDSGCEGGSHQR
Trigger: TCTCTGATGAGATCCTCCTTCACATCCTGAGTCACGTCCCCAGCACAGATCTGATTCTGAACGTCCGGCGTACCTGTCGGAAGCTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
CDS CCA 90 bp CAAGCTTCCGACAGGTACGCCGGACGTTCAGAATCAGATCTGTGCTaGGGACGTGACTCAGGATGTGAAGGAGGATCTCATCAGAGAACC +
Preference number: 5 (lower is better)
Translates to: QASDRYAGRSESDLC*GRDSGCEGGSHQRT
Trigger: GGTTCTCTGATGAGATCCTCCTTCACATCCTGAGTCACGTCCCCAGCACAGATCTGATTCTGAACGTCCGGCGTACCTGTCGGAAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
CDS-3UTR CAA 90 bp GTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGCCCCACACGCACTTTCTaGCCAAAGCCGCGCGGCACT +
Preference number: 5 (lower is better)
Translates to: VSRYSNKAECVSISPGTRPTRTF*PKPRGT
Trigger: AGTGCCGCGCGGCTTTGGCAAGAAAGTGCGTGTGGG...GCGCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000453700.7
ENST00000620087.1
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCAAAAATAGGTTGATGTaGGCCAGGCGTTGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACKNRLM*ARRCGS
Trigger: TGAGCCACAACGCCTGGCCAACATCAACCTATTTTT...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp ATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACGCGTGAACAGCGTCTGCTaGAGCTCCCGCACGCGGCTC +
Preference number: 5 (lower is better)
Translates to: MFRVILTKPNVYRFPQERVNSVC*SSRTRL
Trigger: GAGCCGCGTGCGGGAGCTCAAGCAGACGCTGTTCAC...GCGTTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CAA 90 bp GTGACAGGAAGACCCTGGGACACACAGAGCTTTACGGTGGGGCCTTGTTCCAGTATGTCATCATCATCATaGGATATGTCCTCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: VTGRPWDTQSFTVGPCSSMSSSS*DMSSPE
Trigger: CTCCGGAGAGGACATATCCAATGATGATGATGACAT...ACTGGAACAAGGCCCCACCGTAAAGCTCTGTGTGTCCCAGGGTCTTCCTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS-3UTR CAA 90 bp AAGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCCGGCTCAGGGTGGCCTaGCACTCGCTGCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: KSFEMGSCDCYSSLKNPFRLRVA*HSLLSW
Trigger: CCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCCG...GAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CAA 90 bp AAGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCCCCATCATGCCCAGGTaGGCCAGCGACAGGGACCGC +
Preference number: 5 (lower is better)
Translates to: KSFEMGSCDCYSSLKNPFPIMPR*ASDRDR
Trigger: GCGGTCCCTGTCGCTGGCCAACCTGGGCATGATGGG...GAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CAA 90 bp ATGGGATGGAGAGTCCCAAGTCTGCAGCCACTAAACTGGCAGGCCCTTCCCCATGCTGCAGAATATAAATaGCAACTAACGCTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: MGWRVPSLQPLNWQALPHAAEYK*QLTLVP
Trigger: TGGCACCAGCGTTAGTTGCAATTTATATTCTGCAGC...ATGGGGAAGGGCCTGCCAGTTTAGTGGCTGCAGACTTGGGACTCTCCATCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCTCACTTAAAAATAGGTaGATGTTGGCCAGGCGTTGT +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACSLKNR*MLARRC
Trigger: ACAACGCCTGGCCAACATCAACCTATTTTTAAGTGA...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp GCTCTAAGTCAGAGGATGGTTGCAGGGGACACTAAAAATACAAGGTCCACTGTTGTGTGGATGAGGCTCTaGTCAAGGCACAGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: ALSQRMVAGDTKNTRSTVVWMRL*SRHRAA
Trigger: TGCAGCCCTGTGCCTTGACAAGAGCCTCATCCACAC...AACAGTGGACCTTGTATTTTTAGTGTCCCCTGCAACCATCCTCTGACTTAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGCGGCTCAGGGTGGCCTaGCACTCGCTGCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPRLRVA*HSLLSW
Trigger: CCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCCG...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CAA 90 bp AGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCTCCGTTCAGCCAGGACTaGGGCAGCTGCAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: SHLKWGHVIATPALRILSPFSQD*GSCRAS
Trigger: GGATGCCCTGCAGCTGCCCAAGTCCTGGCTGAACGG...AGAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CAA 90 bp CCTCAGTGTCTGTGGGGTTTGTGTTCATCATGCCCAGTAGATCTAGAAACTTCTATGGCGGAGGAGAAGTaGGACCCAATCAGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: PQCLWGLCSSCPVDLETSMAEEK*DPISSR
Trigger: CCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCAT...AGAAGTTTCTAGATCTACTGGGCATGATGAACACAAACCCCACAGACACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382368.8
CDS-3UTR CAA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGGACTGCTGCAGGCTCTaGCAGGTGGCGAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPDCCRL*QVARDS
Trigger: GGAGTCCCTCGCCACCTGCAAGAGCCTGCAGCAGTC...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CAA 90 bp CTACTTGGGAGGTTGAGGCAGGAGAATGTCGTGAACCCGGGAGGCAGAGCTTGCCTCTATAAACACAAGTaGTTTTTACAACCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: LLGRLRQENVVNPGGRACLYKHK*FLQPER
Trigger: CCTCTCTGGTTGTAAAAACAACTTGTGTTTATAGAG...GCAAGCTCTGCCTCCCGGGTTCACGACATTCTCCTGCCTCAACCTCCCAAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS-3UTR CAA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTGTGAACAGCGTCTGCTaGAGCTCCCGCACGCGGCTC +
Preference number: 5 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFVNSVC*SSRTRL
Trigger: GAGCCGCGTGCGGGAGCTCAAGCAGACGCTGTTCAC...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CAA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAACAGGGCCCCCAGGGATaGCGGCTCAGTATACAAACC +
Preference number: 5 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEQGPQG*RLSIQT
Trigger: GGTTTGTATACTGAGCCGCAATCCCTGGGGGCCCTG...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CAA 90 bp AGTCATTTGAAATGGGGTCATGTGATTGCTACTCCAGCCTTAAGAATCCTTTCTCGCCTGATAGTCCTTTaGCAGCAACACGGTGTGGAT +
Preference number: 5 (lower is better)
Translates to: SHLKWGHVIATPALRILSRLIVL*QQHGVD
Trigger: ATCCACACCGTGTTGCTGCAAAAGGACTATCAGGCG...AGAAAGGATTCTTAAGGCTGGAGTAGCAATCACATGACCCCATTTCAAATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CAA 90 bp AGCCTTAAGAATCCTTTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGTGGGGTATCCCTGTGTaGCCCAGGCTGATCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SLKNPFWVLMFRVILTKPWGIPV*PRLISN
Trigger: GTTTGAGATCAGCCTGGGCAACACAGGGATACCCCA...CGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAAAGGATTCTTAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CAA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAATTCCCCATGTCACACTaGACCATGCAAGGGGACACT +
Preference number: 5 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEFPMSH*TMQGDT
Trigger: AGTGTCCCCTTGCATGGTCAAGTGTGACATGGGGAA...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS-3UTR CAA 90 bp TTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTCCCCAGGAAATGTCATCATCATCATaGGATATGTCCTCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: LMFRVILTKPNVYRFPQEMSSSS*DMSSPE
Trigger: CTCCGGAGAGGACATATCCAATGATGATGATGACAT...TTCCTGGGGAAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS-3UTR CAA 90 bp TTCTGGGTTTTAATGTTTCGCGTTATTCTAACAAAGCCGAATGTGTATCGATTTATGTCATCATCATCATaGGATATGTCCTCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: FWVLMFRVILTKPNVYRFMSSSS*DMSSPE
Trigger: CTCCGGAGAGGACATATCCAATGATGATGATGACAT...AAATCGATACACATTCGGCTTTGTTAGAATAACGCGAAACATTAAAACCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS GCA 72 bp CGCGGCCGCGGGATCCGCAACCCCGTGCCTCCCACCTaGCCGGCTAGGGATGCTCGAAGCCGGCGCGTCCAC +
Preference number: 6 (lower is better)
Translates to: RGRGIRNPVPPT*PARDARSRRVH
Trigger: GTGGACGCGCCGGCTTCGAGCATCCCTAGCCGGGCAGGTGGGAGGCACGGGGTTGCGGATCCCGCGGCCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000453700.7
CDS GCA 72 bp GCTCCCGCACGCGGCTCAGGGTGGCCTTGCACTCGCTaGTCAGCTGGCTGGCGTCGAAGCCGGGGCTCACGT +
Preference number: 6 (lower is better)
Translates to: APARGSGWPCTR*SAGWRRSRGSR
Trigger: ACGTGAGCCCCGGCTTCGACGCCAGCCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCCGCGTGCGGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS GCA 72 bp CGACACTCTGTGCGCGGCTGCAGGGTGGGAGCGAGTTaGGGATGGCGGGCTCGTTGCGGGGCATGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: RHSVRGCRVGAS*GWRARCGAWRR
Trigger: CCTCCGCCATGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTGCAGCCGCGCACAGAGTGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS GCA 72 bp CCCGTAAGGACGCTGGGCAGCTGTGCGAGCGTCAGGTaGCGCAGGAAGGCCAGCTGGCCGATGGCGGCCACC +
Preference number: 6 (lower is better)
Translates to: PVRTLGSCASVR*RRKASWPMAAT
Trigger: GGTGGCCGCCATCGGCCAGCTGGCCTTCCTGCGGCACCTGACGCTCGCACAGCTGCCCAGCGTCCTTACGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS GCA 72 bp GCGGGCCGCTCGGCCTGGAAGCTGCGGAGAAGCGACTaGTGCAGGCTCTTGCAGGTGGCGAGGGACTCCCCG +
Preference number: 6 (lower is better)
Translates to: AGRSAWKLRRSD*CRLLQVARDSP
Trigger: CGGGGAGTCCCTCGCCACCTGCAAGAGCCTGCAGCAGTCGCTTCTCCGCAGCTTCCAGGCCGAGCGGCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS CCA 72 bp CAGAGGTGGCGGCCCAGGCCCTCCGAGCTGTGGTGGTaGGCGGCCGAGAGGTTCAGGTGGCGCAGGTTGCAG +
Preference number: 6 (lower is better)
Translates to: QRWRPRPSELWW*AAERFRWRRLQ
Trigger: CTGCAACCTGCGCCACCTGAACCTCTCGGCCGCCCACCACCACAGCTCGGAGGGCCTGGGCCGCCACCTCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS CCA 72 bp TGGCAGAGGTGGCGGCCCAGGCCCTCCGAGCTGTGGTaGTGGGCGGCCGAGAGGTTCAGGTGGCGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: WQRWRPRPSELW*WAAERFRWRRL
Trigger: CAACCTGCGCCACCTGAACCTCTCGGCCGCCCACCACCACAGCTCGGAGGGCCTGGGCCGCCACCTCTGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS CCA 72 bp CTCCGAGTCCCCGACACTCTGTGCGCGGCTGCAGGGTaGGAGCGAGTTGCGGATGGCGGGCTCGTTGCGGGG +
Preference number: 6 (lower is better)
Translates to: LRVPDTLCAAAG*ERVADGGLVAG
Trigger: CCCCGCAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTGCAGCCGCGCACAGAGTGTCGGGGACTCGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS GCA 72 bp GGCCGCTCGGCCTGGAAGCTGCGGAGAAGCGACTGCTaGAGGCTCTTGCAGGTGGCGAGGGACTCCCCGGTG +
Preference number: 6 (lower is better)
Translates to: GRSAWKLRRSDC*RLLQVARDSPV
Trigger: CACCGGGGAGTCCCTCGCCACCTGCAAGAGCCTGCAGCAGTCGCTTCTCCGCAGCTTCCAGGCCGAGCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS GCA 72 bp CTGGGGGCTCCTCAGCGGCTGCGGAGAAGCGACTGCTaGAGGCTCTTGCAGGTGGCGAGGGACTCCCCGGTG +
Preference number: 6 (lower is better)
Translates to: LGAPQRLRRSDC*RLLQVARDSPV
Trigger: CACCGGGGAGTCCCTCGCCACCTGCAAGAGCCTGCAGCAGTCGCTTCTCCGCAGCCGCTGAGGAGCCCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415009.5
CDS CCA 72 bp TCAGCTGGCTGGCGTCGAAGCCGGGGCTCACGTCGATaGCCAGCGAGCGCAGGTGCTGCAGGGCCGAGAGCA +
Preference number: 6 (lower is better)
Translates to: SAGWRRSRGSRR*PASAGAAGPRA
Trigger: TGCTCTCGGCCCTGCAGCACCTGCGCTCGCTGGCCATCGACGTGAGCCCCGGCTTCGACGCCAGCCAGCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 72 bp GGCTCAGGGTGGCCTTGCACTCGCTGCTCAGCTGGCTaGCGTCGAAGCCGGGGCTCACGTCGATGGCCAGCG +
Preference number: 6 (lower is better)
Translates to: GSGWPCTRCSAG*RRSRGSRRWPA
Trigger: CGCTGGCCATCGACGTGAGCCCCGGCTTCGACGCCAGCCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 72 bp ACGCGGCTCAGGGTGGCCTTGCACTCGCTGCTCAGCTaGCTGGCGTCGAAGCCGGGGCTCACGTCGATGGCC +
Preference number: 6 (lower is better)
Translates to: TRLRVALHSLLS*LASKPGLTSMA
Trigger: GGCCATCGACGTGAGCCCCGGCTTCGACGCCAGCCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCCGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 72 bp AGCTGTGCGAGCGTCAGGTGCCGCAGGAAGGCCAGCTaGCCGATGGCGGCCACCTCCGAGTCCCCGACACTC +
Preference number: 6 (lower is better)
Translates to: SCASVRCRRKAS*PMAATSESPTL
Trigger: GAGTGTCGGGGACTCGGAGGTGGCCGCCATCGGCCAGCTGGCCTTCCTGCGGCACCTGACGCTCGCACAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 72 bp AGGCAGCGAGCCATGAAGGCCAGCACGGCATCGGGCTaGAGGGTGCCGCTGCGAGAGACCAGGCACAGGCGC +
Preference number: 6 (lower is better)
Translates to: RQRAMKASTASG*RVPLRETRHRR
Trigger: GCGCCTGTGCCTGGTCTCTCGCAGCGGCACCCTCCAGCCCGATGCCGTGCTGGCCTTCATGGCTCGCTGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CAA 90 bp GTGAACAGCGTCTGCTTGAGCTCCCGCACGCGGCTCAGGGTGGCCTaGCACTCGCTGCTCAGCTGGCTGGCGTCGAAGCCGGGGCTCACG +
Preference number: 6 (lower is better)
Translates to: VNSVCLSSRTRLRVA*HSLLSWLASKPGLT
Trigger: CGTGAGCCCCGGCTTCGACGCCAGCCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCCGCGTGCGGGAGCTCAAGCAGACGCTGTTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CAA 90 bp TCCGAGTCCCCGACACTCTGTGCGCGGCTGCAGGGTGGGAGCGAGTaGCGGATGGCGGGCTCGTTGCGGGGCATGGCGGAGGAGAAGTTG +
Preference number: 6 (lower is better)
Translates to: SESPTLCARLQGGSE*RMAGSLRGMAEEKL
Trigger: CAACTTCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTGCAGCCGCGCACAGAGTGTCGGGGACTCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS GCA 72 bp AAGCCGGGGCTCACGTCGATGGCCAGCGAGCGCAGGTaGTGCAGGGCCGAGAGCATCTTGGAGAGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: KPGLTSMASERR*CRAESILERRR
Trigger: CCTGCGCCTCTCCAAGATGCTCTCGGCCCTGCAGCACCTGCGCTCGCTGGCCATCGACGTGAGCCCCGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS GCA 72 bp TGGAGGGTGCCGCTGCGAGAGACCAGGCACAGGCGCTaGAGCGAGGGGCACTGGCTCAGCGCCTGGAAGAAC +
Preference number: 6 (lower is better)
Translates to: WRVPLRETRHRR*SEGHWLSAWKN
Trigger: GTTCTTCCAGGCGCTGAGCCAGTGCCCCTCGCTGCAGCGCCTGTGCCTGGTCTCTCGCAGCGGCACCCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 72 bp TCTGTGCGCGGCTGCAGGGTGGGAGCGAGTTGCGGATaGCGGGCTCGTTGCGGGGCATGGCGGAGGAGAAGT +
Preference number: 6 (lower is better)
Translates to: SVRGCRVGASCG*RARCGAWRRRS
Trigger: ACTTCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTGCAGCCGCGCACAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 72 bp CGAGAGACCAGGCACAGGCGCTGCAGCGAGGGGCACTaGCTCAGCGCCTGGAAGAACTGGGCGTTGGCGCTG +
Preference number: 6 (lower is better)
Translates to: RETRHRRCSEGH*LSAWKNWALAL
Trigger: CAGCGCCAACGCCCAGTTCTTCCAGGCGCTGAGCCAGTGCCCCTCGCTGCAGCGCCTGTGCCTGGTCTCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CAA 72 bp GTCTGCTTGAGCTCCCGCACGCGGCTCAGGGTGGCCTaGCACTCGCTGCTCAGCTGGCTGGCGTCGAAGCCG +
Preference number: 6 (lower is better)
Translates to: VCLSSRTRLRVA*HSLLSWLASKP
Trigger: CGGCTTCGACGCCAGCCAGCTGAGCAGCGAGTGCAAGGCCACCCTGAGCCGCGTGCGGGAGCTCAAGCAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CAA 90 bp TGTGCGCGGCTGCAGGGTGGGAGCGAGTTGCGGATGGCGGGCTCGTaGCGGGGCATGGCGGAGGAGAAGTTGGACCCAATCAGCTCGAGG +
Preference number: 6 (lower is better)
Translates to: CARLQGGSELRMAGS*RGMAEEKLDPISSR
Trigger: CCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTGCAGCCGCGCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS TCA 72 bp TGGCGCCGCTCTCCGCGAAGCTGCCAGGGACGGAGATaGGGAAGGCGTGGAGGTTCTGAGGAGTGCGGTCGC +
Preference number: 6 (lower is better)
Translates to: WRRSPRSCQGRR*GRRGGSEECGR
Trigger: GCGACCGCACTCCTCAGAACCTCCACGCCTTCCTCATCTCCGTCCCTGGCAGCTTCGCGGAGAGCGGCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS GCA 72 bp GGTGGTGGGCGGCCGAGAGGTTCAGGTGGCGCAGGTTaGAGCAGGACGCCACCAGAGTCTCCAGGATGCTGC +
Preference number: 6 (lower is better)
Translates to: GGGRPRGSGGAG*SRTPPESPGCC
Trigger: GCAGCATCCTGGAGACTCTGGTGGCGTCCTGCTGCAACCTGCGCCACCTGAACCTCTCGGCCGCCCACCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS GCA 72 bp CCTGTCACCTCTCCCCACCTGCGGAGAAGCGACTGCTaGAGGCTCTTGCAGGTGGCGAGGGACTCCCCGGTG +
Preference number: 6 (lower is better)
Translates to: PVTSPHLRRSDC*RLLQVARDSPV
Trigger: CACCGGGGAGTCCCTCGCCACCTGCAAGAGCCTGCAGCAGTCGCTTCTCCGCAGGTGGGGAGAGGTGACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS CCA 72 bp GCACGACATTGCGCGCCATGGAGTCCAGGAGGTTCTTaGTGGCGCCGCTCTCCGCGAAGCTGCCAGGGACGG +
Preference number: 6 (lower is better)
Translates to: ARHCAPWSPGGS*WRRSPRSCQGR
Trigger: CCGTCCCTGGCAGCTTCGCGGAGAGCGGCGCCACCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 72 bp TCCGCCTTGCGGAGCAGCGAGTCTGGGGACAGGCAGTaGACGCAGCCGCTGAGGTTCAAGCTGGCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: SALRSSESGDRQ*TQPLRFKLARL
Trigger: GAGCCTGGCCAGCTTGAACCTCAGCGGCTGCGTCCACTGCCTGTCCCCAGACTCGCTGCTCCGCAAGGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS CAA 90 bp ACGTCGATGGCCAGCGAGCGCAGGTGCTGCAGGGCCGAGAGCATCTaGGAGAGGCGCAGGGAAGTGAGGTGGCAGCCCGAGAGGTTCACC +
Preference number: 6 (lower is better)
Translates to: TSMASERRCCRAESI*ERRREVRWQPERFT
Trigger: GGTGAACCTCTCGGGCTGCCACCTCACTTCCCTGCGCCTCTCCAAGATGCTCTCGGCCCTGCAGCACCTGCGCTCGCTGGCCATCGACGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CAA 90 bp GCCACCAGAGTCTCCAGGATGCTGCTGTCGATGTCGTCCTCCGCCTaGCGGAGCAGCGAGTCTGGGGACAGGCAGTGGACGCAGCCGCTG +
Preference number: 6 (lower is better)
Translates to: ATRVSRMLLSMSSSA*RSSESGDRQWTQPL
Trigger: CAGCGGCTGCGTCCACTGCCTGTCCCCAGACTCGCTGCTCCGCAAGGCGGAGGACGACATCGACAGCAGCATCCTGGAGACTCTGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS GCA 72 bp GCCAGGCTCCGCAGGTCCTTCCCGCCGTTGATGACCTaGTGGATCAGATGGCCGCCTGACAGGGTACAGCGG +
Preference number: 6 (lower is better)
Translates to: ARLRRSFPPLMT*WIRWPPDRVQR
Trigger: CCGCTGTACCCTGTCAGGCGGCCATCTGATCCAGCAGGTCATCAACGGCGGGAAGGACCTGCGGAGCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 72 bp CGACATTGCGCGCCATGGAGTCCAGGAGGTTCTTGGTaGCGCCGCTCTCCGCGAAGCTGCCAGGGACGGAGA +
Preference number: 6 (lower is better)
Translates to: RHCAPWSPGGSW*RRSPRSCQGRR
Trigger: TCTCCGTCCCTGGCAGCTTCGCGGAGAGCGGCGCCACCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 72 bp GCAGCTGCAGGGCATCCAGCACGACATTGCGCGCCATaGAGTCCAGGAGGTTCTTGGTGGCGCCGCTCTCCG +
Preference number: 6 (lower is better)
Translates to: AAAGHPARHCAP*SPGGSWWRRSP
Trigger: CGGAGAGCGGCGCCACCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCGTGCTGGATGCCCTGCAGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 72 bp ATGCCCAGGTTGGCCAGCGACAGGGACCGCAACTGCTaGCACTGCAGGCCGATATTGACCAGCCCGGAGCCC +
Preference number: 6 (lower is better)
Translates to: MPRLASDRDRNC*HCRPILTSPEP
Trigger: GGGCTCCGGGCTGGTCAATATCGGCCTGCAGTGCCAGCAGTTGCGGTCCCTGTCGCTGGCCAACCTGGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CAA 72 bp AGCACGACATTGCGCGCCATGGAGTCCAGGAGGTTCTaGGTGGCGCCGCTCTCCGCGAAGCTGCCAGGGACG +
Preference number: 6 (lower is better)
Translates to: STTLRAMESRRF*VAPLSAKLPGT
Trigger: CGTCCCTGGCAGCTTCGCGGAGAGCGGCGCCACCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CAA 72 bp CTGCAGGGTGGGAGCGAGTTGCGGATGGCGGGCTCGTaGCGGGGCATGGCGGAGGAGAAGTTGGACCCAATC +
Preference number: 6 (lower is better)
Translates to: LQGGSELRMAGS*RGMAEEKLDPI
Trigger: GATTGGGTCCAACTTCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CAA 90 bp AGGGCATCCAGCACGACATTGCGCGCCATGGAGTCCAGGAGGTTCTaGGTGGCGCCGCTCTCCGCGAAGCTGCCAGGGACGGAGATGAGG +
Preference number: 6 (lower is better)
Translates to: RASSTTLRAMESRRF*VAPLSAKLPGTEMR
Trigger: CCTCATCTCCGTCCCTGGCAGCTTCGCGGAGAGCGGCGCCACCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCGTGCTGGATGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CAA 90 bp CCGTTCAGCCAGGACTTGGGCAGCTGCAGGGCATCCAGCACGACATaGCGCGCCATGGAGTCCAGGAGGTTCTTGGTGGCGCCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: PFSQDLGSCRASSTT*RAMESRRFLVAPLS
Trigger: GGAGAGCGGCGCCACCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCGTGCTGGATGCCCTGCAGCTGCCCAAGTCCTGGCTGAACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CAA 90 bp CCGCTGAGGTTCAAGCTGGCCAGGCTCCGCAGGTCCTTCCCGCCGTaGATGACCTGCTGGATCAGATGGCCGCCTGACAGGGTACAGCGG +
Preference number: 6 (lower is better)
Translates to: PLRFKLARLRRSFPP*MTCWIRWPPDRVQR
Trigger: CCGCTGTACCCTGTCAGGCGGCCATCTGATCCAGCAGGTCATCAACGGCGGGAAGGACCTGCGGAGCCTGGCCAGCTTGAACCTCAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS GCA 72 bp CCACGGTGGAGCCAGGCAGCCAGTAGCAGCCAGCCATaGTCAGCTGCTGGATCTCCCGGCCGATCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: PRWSQAASSSQP*SAAGSPGRSPS
Trigger: TGAAGGAGATCGGCCGGGAGATCCAGCAGCTGAGCATGGCTGGCTGCTACTGGCTGCCTGGCTCCACCGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
CDS GCA 72 bp GGTTGCAGCAGGACGCCACCAGAGTCTCCAGGATGCTaGTGTCGATGTCGTCCTCCGCCTTGCGGAGCAGCG +
Preference number: 6 (lower is better)
Translates to: GCSRTPPESPGC*CRCRPPPCGAA
Trigger: CGCTGCTCCGCAAGGCGGAGGACGACATCGACAGCAGCATCCTGGAGACTCTGGTGGCGTCCTGCTGCAACC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS GCA 72 bp TGCAGGGTGGGAGCGAGTTGCGGATGGCGGGCTCGTTaGGGGGCATGGCGGAGGAGAAGTTGGACCCAATCA +
Preference number: 6 (lower is better)
Translates to: CRVGASCGWRAR*GAWRRRSWTQS
Trigger: TGATTGGGTCCAACTTCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCGCAACTCGCTCCCACCCTGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS GCA 72 bp AGGTTGGCCAGCGACAGGGACCGCAACTGCTGGCACTaGAGGCCGATATTGACCAGCCCGGAGCCCGTAAGG +
Preference number: 6 (lower is better)
Translates to: RLASDRDRNCWH*RPILTSPEPVR
Trigger: CCTTACGGGCTCCGGGCTGGTCAATATCGGCCTGCAGTGCCAGCAGTTGCGGTCCCTGTCGCTGGCCAACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 72 bp GCCGAGAGCATCTTGGAGAGGCGCAGGGAAGTGAGGTaGCAGCCCGAGAGGTTCACCTTCACCAGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: AESILERRREVR*QPERFTFTRLR
Trigger: CCGCAGCCTGGTGAAGGTGAACCTCTCGGGCTGCCACCTCACTTCCCTGCGCCTCTCCAAGATGCTCTCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 72 bp AGGCTCCGCAGGTCCTTCCCGCCGTTGATGACCTGCTaGATCAGATGGCCGCCTGACAGGGTACAGCGGCTG +
Preference number: 6 (lower is better)
Translates to: RLRRSFPPLMTC*IRWPPDRVQRL
Trigger: CAGCCGCTGTACCCTGTCAGGCGGCCATCTGATCCAGCAGGTCATCAACGGCGGGAAGGACCTGCGGAGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 72 bp GTCGATGTCGTCCTCCGCCTTGCGGAGCAGCGAGTCTaGGGACAGGCAGTGGACGCAGCCGCTGAGGTTCAA +
Preference number: 6 (lower is better)
Translates to: VDVVLRLAEQRV*GQAVDAAAEVQ
Trigger: TTGAACCTCAGCGGCTGCGTCCACTGCCTGTCCCCAGACTCGCTGCTCCGCAAGGCGGAGGACGACATCGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS CCA 72 bp CGGCCGACCGCAAGGACAACAGACTACCCCAGAGTCTaGCAAGCAGGGTTGTCGGCGCCCAGTGGCTCGAGA +
Preference number: 6 (lower is better)
Translates to: RPTARTTDYPRV*QAGLSAPSGSR
Trigger: TCTCGAGCCACTGGGCGCCGACAACCCTGCTTGCCAGACTCTGGGGTAGTCTGTTGTCCTTGCGGTCGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS CCA 72 bp AGTCAGCGACAGAGCAGCGAGTCTGGGGACAGGCAGTaGACGCAGCCGCTGAGGTTCAAGCTGGCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: SQRQSSESGDRQ*TQPLRFKLARL
Trigger: GAGCCTGGCCAGCTTGAACCTCAGCGGCTGCGTCCACTGCCTGTCCCCAGACTCGCTGCTCTGTCGCTGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453700.7
CDS CAA 72 bp GTCTCCAGGATGCTGCTGTCGATGTCGTCCTCCGCCTaGCGGAGCAGCGAGTCTGGGGACAGGCAGTGGACG +
Preference number: 6 (lower is better)
Translates to: VSRMLLSMSSSA*RSSESGDRQWT
Trigger: CGTCCACTGCCTGTCCCCAGACTCGCTGCTCCGCAAGGCGGAGGACGACATCGACAGCAGCATCCTGGAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS TCA 72 bp GGGTTGTCGGCGCCCAGTGGCTCGAGACGTCCTGGCTaGTGGCTCTTCTCGCAACTCTGTGAACAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GLSAPSGSRRPG*WLFSQLCEQLG
Trigger: CCCCAGCTGTTCACAGAGTTGCGAGAAGAGCCATCAGCCAGGACGTCTCGAGCCACTGGGCGCCGACAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS GCA 72 bp AGGACTTGGGCAGCTGCAGGGCATCCAGCACGACATTaGGCGCCATGGAGTCCAGGAGGTTCTTGGTGGCGC +
Preference number: 6 (lower is better)
Translates to: RTWAAAGHPARH*APWSPGGSWWR
Trigger: GCGCCACCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCGTGCTGGATGCCCTGCAGCTGCCCAAGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS GCA 72 bp AGGAGGGAAGAGCCGTTCAGCCAGGACTTGGGCAGCTaGAGGGCATCCAGCACGACATTGCGCGCCATGGAG +
Preference number: 6 (lower is better)
Translates to: RREEPFSQDLGS*RASSTTLRAME
Trigger: CTCCATGGCGCGCAATGTCGTGCTGGATGCCCTGCAGCTGCCCAAGTCCTGGCTGAACGGCTCTTCCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS GCA 72 bp GCAGGTTGCAGCAGGACGCCACCAGAGTCTCCAGGATaGTGCTGTCGATGTCGTCCTCCGCCTTGCGGAGCA +
Preference number: 6 (lower is better)
Translates to: AGCSRTPPESPG*CCRCRPPPCGA
Trigger: TGCTCCGCAAGGCGGAGGACGACATCGACAGCAGCATCCTGGAGACTCTGGTGGCGTCCTGCTGCAACCTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
CDS GCA 72 bp CTGAGAGCGCGGGCATGTACACCACCTTCCCCATCATaGCCAGGTTGGCCAGCGACAGGGACCGCAACTGCT +
Preference number: 6 (lower is better)
Translates to: LRARACTPPSPS*PGWPATGTATA
Trigger: AGCAGTTGCGGTCCCTGTCGCTGGCCAACCTGGGCATGATGGGGAAGGTGGTGTACATGCCCGCGCTCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS GCA 72 bp AGGGACTCCCCGGTGAACAGGTGGCACATGACAACCTaGAGGCAGCGAGCCATGAAGGCCAGCACGGCATCG +
Preference number: 6 (lower is better)
Translates to: RDSPVNRWHMTT*RQRAMKASTAS
Trigger: CGATGCCGTGCTGGCCTTCATGGCTCGCTGCCTGCAGGTTGTCATGTGCCACCTGTTCACCGGGGAGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 72 bp TGGCGGGCTCGTTGCGGGGCATGGCGGAGGAGAAGTTaGACCCAATCAGCTCGAGGTGTTCCAGGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: WRARCGAWRRRS*TQSARGVPGRA
Trigger: TGCCCTTCCTGGAACACCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCATGCCCCGCAACGAGCCCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CAA 72 bp CAGGACTTGGGCAGCTGCAGGGCATCCAGCACGACATaGCGCGCCATGGAGTCCAGGAGGTTCTTGGTGGCG +
Preference number: 6 (lower is better)
Translates to: QDLGSCRASSTT*RAMESRRFLVA
Trigger: CGCCACCAAGAACCTCCTGGACTCCATGGCGCGCAATGTCGTGCTGGATGCCCTGCAGCTGCCCAAGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CAA 72 bp TTCAAGCTGGCCAGGCTCCGCAGGTCCTTCCCGCCGTaGATGACCTGCTGGATCAGATGGCCGCCTGACAGG +
Preference number: 6 (lower is better)
Translates to: FKLARLRRSFPP*MTCWIRWPPDR
Trigger: CCTGTCAGGCGGCCATCTGATCCAGCAGGTCATCAACGGCGGGAAGGACCTGCGGAGCCTGGCCAGCTTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CAA 72 bp ATGGCGGGCTCGTTGCGGGGCATGGCGGAGGAGAAGTaGGACCCAATCAGCTCGAGGTGTTCCAGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: MAGSLRGMAEEK*DPISSRCSRKG
Trigger: GCCCTTCCTGGAACACCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCATGCCCCGCAACGAGCCCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CAA 90 bp GAGTTGCGGATGGCGGGCTCGTTGCGGGGCATGGCGGAGGAGAAGTaGGACCCAATCAGCTCGAGGTGTTCCAGGAAGGGCAGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: ELRMAGSLRGMAEEK*DPISSRCSRKGRFF
Trigger: GAAGAACCTGCCCTTCCTGGAACACCTCGAGCTGATTGGGTCCAACTTCTCCTCCGCCATGCCCCGCAACGAGCCCGCCATCCGCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS CCA 72 bp CTCTTGCAGGTGGCGAGGGACTCCCCGGTGAACAGGTaGCACATGACAACCTGCAGGCAGCGAGCCATGAAG +
Preference number: 6 (lower is better)
Translates to: LLQVARDSPVNR*HMTTCRQRAMK
Trigger: CTTCATGGCTCGCTGCCTGCAGGTTGTCATGTGCCACCTGTTCACCGGGGAGTCCCTCGCCACCTGCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS TCA 72 bp GAGACGTCCTGGCTGATGGCTCTTCTCGCAACTCTGTaGACAGCTGGGGCCTCCTTCCTGTCACCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: ETSWLMALLATL*TAGASFLSPLP
Trigger: GGGGAGAGGTGACAGGAAGGAGGCCCCAGCTGTTCACAGAGTTGCGAGAAGAGCCATCAGCCAGGACGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS TCA 72 bp CCCGCCGTTGATGACCTGCTGGATCAGATGGCCGCCTaGCAGGGTACAGCGGCTGAAACTGAAGTAGAACGG +
Preference number: 6 (lower is better)
Translates to: PAVDDLLDQMAA*QGTAAETEVER
Trigger: CCGTTCTACTTCAGTTTCAGCCGCTGTACCCTGTCAGGCGGCCATCTGATCCAGCAGGTCATCAACGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS CCA 72 bp AGGTCCTTCCCGCCGTTGATGACCTGCTGGATCAGATaGCCGCCTGACAGGGTACAGCGGCTGAAACTGAAG +
Preference number: 6 (lower is better)
Translates to: RSFPPLMTCWIR*PPDRVQRLKLK
Trigger: CTTCAGTTTCAGCCGCTGTACCCTGTCAGGCGGCCATCTGATCCAGCAGGTCATCAACGGCGGGAAGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
ENST00000458142.1
CDS TCA 72 bp GAGGTCCCTCAGCCGCTTGCAGTGCTTCAACATGTCTaGGAGCGCGGGCATGTACACCACCTTCCCCATCAT +
Preference number: 6 (lower is better)
Translates to: EVPQPLAVLQHV*ERGHVHHLPHH
Trigger: ATGATGGGGAAGGTGGTGTACATGCCCGCGCTCTCAGACATGTTGAAGCACTGCAAGCGGCTGAGGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000458142.1
ENST00000620087.1
CDS TCA 72 bp AACCAGAGAGGGGGAAACCCCAACCAGGATTATTCCTaGGACAGCCAGCGGCCGACCGCAAGGACAACAGAC +
Preference number: 6 (lower is better)
Translates to: NQRGGNPNQDYS*DSQRPTARTTD
Trigger: GTCTGTTGTCCTTGCGGTCGGCCGCTGGCTGTCTCAGGAATAATCCTGGTTGGGGTTTCCCCCTCTCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458142.1
CDS GCA 72 bp AGGTGGACCCCGTCTGCCATCCCGGCTGCTGCAGGGTaGATGTCATCATCATCATTGGATATGTCCTCTCCG +
Preference number: 6 (lower is better)
Translates to: RWTPSAIPAAAG*MSSSSLDMSSP
Trigger: CGGAGAGGACATATCCAATGATGATGATGACATGCACCCTGCAGCAGCCGGGATGGCAGACGGGGTCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
CDS GCA 72 bp CACGGTGTGGATGAGGCTCTTGTCAAGGCACAGGGCTaGAAGCTTCCGACAGGTACGCCGGACGTTCAGAAT +
Preference number: 6 (lower is better)
Translates to: HGVDEALVKAQG*KLPTGTPDVQN
Trigger: ATTCTGAACGTCCGGCGTACCTGTCGGAAGCTTGCAGCCCTGTGCCTTGACAAGAGCCTCATCCACACCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
CDS GCA 72 bp GCCACTCTGCTCTTAAATAAGGTGATCTCATCCAGGTaGACCAGGGGGACGTCCCGGATGACGTCGGTCAGG +
Preference number: 6 (lower is better)
Translates to: ATLLLNKVISSR*TRGTSRMTSVR
Trigger: CCTGACCGACGTCATCCGGGACGTCCCCCTGGTGCACCTGGATGAGATCACCTTATTTAAGAGCAGAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382368.8
ENST00000620087.1
CDS TCA 72 bp TCGCCTGATAGTCCTTTTGCAGCAACACGGTGTGGATaGGGCTCTTGTCAAGGCACAGGGCTGCAAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SPDSPFAATRCG*GSCQGTGLQAS
Trigger: GGAAGCTTGCAGCCCTGTGCCTTGACAAGAGCCTCATCCACACCGTGTTGCTGCAAAAGGACTATCAGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7
CDS CCA 72 bp GACAGGTACGCCGGACGTTCAGAATCAGATCTGTGCTaGGGACGTGACTCAGGATGTGAAGGAGGATCTCAT +
Preference number: 6 (lower is better)
Translates to: DRYAGRSESDLC*GRDSGCEGGSH
Trigger: ATGAGATCCTCCTTCACATCCTGAGTCACGTCCCCAGCACAGATCTGATTCTGAACGTCCGGCGTACCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382368.8
ENST00000415009.5
ENST00000453700.7