RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXL17 (Homo sapiens)

Ensembl gene IDs: ENSG00000145743

Ensembl transcript IDs: ENST00000481160.1, ENST00000496714.2, ENST00000518486.1, ENST00000542267.7, ENST00000619412.4

Found 410 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGAGGAAGCCAGACAGCAAGGCTGGGTCCAGCATCTCCCTGGGCTaGACTGCAGCAGGCTCTGACCAGACGGCGTCGTGCTGGAGCCAA +
Preference number: 1 (lower is better)
Translates to: LRKPDSKAGSSISLG*TAAGSDQTASCWSQ
Trigger: TTGGCTCCAGCACGACGCCGTCTGGTCAGAGCCTGCTGCAGTGCAGCCCAGGGAGATGCTGGACCCAGCCTTGCTGTCTGGCTTCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 90 bp AGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTaGATACAGACTCCAAAGACCCGGCATGAAGTCTTGCCAGAGTAT +
Preference number: 1 (lower is better)
Translates to: SPRGHRLPPGLCQQH*IQTPKTRHEVLPEY
Trigger: ATACTCTGGCAAGACTTCATGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 90 bp TGCACTGCAGCAGGCTCTGACCAGACGGCGTCGTGCTGGAGCCAATaGGTTCTCAGAGTGGCTCTCTGGTTAGAGAAAGGATTCAGAGGC +
Preference number: 1 (lower is better)
Translates to: CTAAGSDQTASCWSQ*VLRVALWLEKGFRG
Trigger: GCCTCTGAATCCTTTCTCTAACCAGAGAGCCACTCTGAGAACCCATTGGCTCCAGCACGACGCCGTCTGGTCAGAGCCTGCTGCAGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR GCA 90 bp GCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCATGAAGTCTTaGCAGAGTATCCTGGGGCCACTGACTGGTCTTTCTGAGCCTCCA +
Preference number: 1 (lower is better)
Translates to: ASSTGYRLQRPGMKS*QSILGPLTGLSEPP
Trigger: TGGAGGCTCAGAAAGACCAGTCAGTGGCCCCAGGATACTCTGGCAAGACTTCATGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 90 bp CAGACGGCGTCGTGCTGGAGCCAATGGGTTCTCAGAGTGGCTCTCTaGTTAGAGAAAGGATTCAGAGGCAGCCCAGGAAAAGGGCTAAAA +
Preference number: 1 (lower is better)
Translates to: QTASCWSQWVLRVAL*LEKGFRGSPGKGLK
Trigger: TTTTAGCCCTTTTCCTGGGCTGCCTCTGAATCCTTTCTCTAACCAGAGAGCCACTCTGAGAACCCATTGGCTCCAGCACGACGCCGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR TCA 90 bp TTTGGAACTGTCTTCCATCCTCACAGAGCCTCTCGTGTTTGGCTCTaGGCTGCTTTAAGTCTGAGGAAGCCAGACAGCAAGGCTGGGTCC +
Preference number: 1 (lower is better)
Translates to: FGTVFHPHRASRVWL*AALSLRKPDSKAGS
Trigger: GGACCCAGCCTTGCTGTCTGGCTTCCTCAGACTTAAAGCAGCTCAGAGCCAAACACGAGAGGCTCTGTGAGGATGGAAGACAGTTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR GCA 90 bp AACTGTCTTCCATCCTCACAGAGCCTCTCGTGTTTGGCTCTGAGCTaGTTTAAGTCTGAGGAAGCCAGACAGCAAGGCTGGGTCCAGCAT +
Preference number: 1 (lower is better)
Translates to: NCLPSSQSLSCLALS*FKSEEARQQGWVQH
Trigger: ATGCTGGACCCAGCCTTGCTGTCTGGCTTCCTCAGACTTAAAGCAGCTCAGAGCCAAACACGAGAGGCTCTGTGAGGATGGAAGACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR TCA 90 bp CAGGACCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTaGTGTATGGGGAGATGCAAATTCCCACATACCCCCTTACTGGCC +
Preference number: 1 (lower is better)
Translates to: QDLWNHFLSCAGSGI*CMGRCKFPHTPLLA
Trigger: GGCCAGTAAGGGGGTATGTGGGAATTTGCATCTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 90 bp CTTCCACCAGGACCTCTGGAACCACTTCTTATCATGTGCTGGGAGTaGCATCTGATGTATGGGGAGATGCAAATTCCCACATACCCCCTT +
Preference number: 1 (lower is better)
Translates to: LPPGPLEPLLIMCWE*HLMYGEMQIPTYPL
Trigger: AAGGGGGTATGTGGGAATTTGCATCTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCCTGGTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 90 bp ACAGGCCTTCCACCAGGACCTCTGGAACCACTTCTTATCATGTGCTaGGAGTGGCATCTGATGTATGGGGAGATGCAAATTCCCACATAC +
Preference number: 1 (lower is better)
Translates to: TGLPPGPLEPLLIMC*EWHLMYGEMQIPTY
Trigger: GTATGTGGGAATTTGCATCTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCCTGGTGGAAGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 90 bp GCAGGCTTTTCTGTGCAAGGCTTTACTTGTGCTTTGTGTGTGGTTTaGAACTGTCTTCCATCCTCACAGAGCCTCTCGTGTTTGGCTCTG +
Preference number: 1 (lower is better)
Translates to: AGFSVQGFTCALCVV*NCLPSSQSLSCLAL
Trigger: CAGAGCCAAACACGAGAGGCTCTGTGAGGATGGAAGACAGTTCCAAACCACACACAAAGCACAAGTAAAGCCTTGCACAGAAAAGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 90 bp GCATCTGATGTATGGGGAGATGCAAATTCCCACATACCCCCTTACTaGCCCTTTGTTGGTCCCGAATGGCCAGAATACATAGATGTTCAG +
Preference number: 1 (lower is better)
Translates to: ASDVWGDANSHIPPY*PFVGPEWPEYIDVQ
Trigger: CTGAACATCTATGTATTCTGGCCATTCGGGACCAACAAAGGGCCAGTAAGGGGGTATGTGGGAATTTGCATCTCCCCATACATCAGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 90 bp TCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTATaGGGAGATGCAAATTCCCACATACCCCCTTACTGGCCCTTTGTT +
Preference number: 1 (lower is better)
Translates to: SGTTSYHVLGVASDV*GDANSHIPPYWPFV
Trigger: AACAAAGGGCCAGTAAGGGGGTATGTGGGAATTTGCATCTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 90 bp AACAAGCAGGCTTTTCTGTGCAAGGCTTTACTTGTGCTTTGTGTGTaGTTTGGAACTGTCTTCCATCCTCACAGAGCCTCTCGTGTTTGG +
Preference number: 1 (lower is better)
Translates to: NKQAFLCKALLVLCV*FGTVFHPHRASRVW
Trigger: CCAAACACGAGAGGCTCTGTGAGGATGGAAGACAGTTCCAAACCACACACAAAGCACAAGTAAAGCCTTGCACAGAAAAGCCTGCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 90 bp GCAAATTCCCACATACCCCCTTACTGGCCCTTTGTTGGTCCCGAATaGCCAGAATACATAGATGTTCAGTACCAAAATTACACACTTGTG +
Preference number: 1 (lower is better)
Translates to: ANSHIPPYWPFVGPE*PEYIDVQYQNYTLV
Trigger: CACAAGTGTGTAATTTTGGTACTGAACATCTATGTATTCTGGCCATTCGGGACCAACAAAGGGCCAGTAAGGGGGTATGTGGGAATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR TCA 90 bp ACCAATTTGGCACTGTTCTTTCCACCTTTACTGTTGCTGGAAACTTaGAACCCAGAATACAATTTTACGGTTAGACCCTGCAAATTGCAG +
Preference number: 1 (lower is better)
Translates to: TNLALFFPPLLLLET*NPEYNFTVRPCKLQ
Trigger: CTGCAATTTGCAGGGTCTAACCGTAAAATTGTATTCTGGGTTTCAAGTTTCCAGCAACAGTAAAGGTGGAAAGAACAGTGCCAAATTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 90 bp TGTGAAAAACCAATTTGGCACTGTTCTTTCCACCTTTACTGTTGCTaGAAACTTGAAACCCAGAATACAATTTTACGGTTAGACCCTGCA +
Preference number: 1 (lower is better)
Translates to: CEKPIWHCSFHLYCC*KLETQNTILRLDPA
Trigger: TGCAGGGTCTAACCGTAAAATTGTATTCTGGGTTTCAAGTTTCCAGCAACAGTAAAGGTGGAAAGAACAGTGCCAAATTGGTTTTTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR GCA 90 bp TTGGGCCATACTTCATTTGCCCCCACATTTGCTACATTTAGAAGATaGATGCCCTTTGAATGGCGTGTCTATTTAGTTTCACATTATTTT +
Preference number: 1 (lower is better)
Translates to: LGHTSFAPTFATFRR*MPFEWRVYLVSHYF
Trigger: AAAATAATGTGAAACTAAATAGACACGCCATTCAAAGGGCATGCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGAAGTATGGCCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 90 bp TTTGCCCCCACATTTGCTACATTTAGAAGATGCATGCCCTTTGAATaGCGTGTCTATTTAGTTTCACATTATTTTGCTAGATTTGTTCCT +
Preference number: 1 (lower is better)
Translates to: FAPTFATFRRCMPFE*RVYLVSHYFARFVP
Trigger: AGGAACAAATCTAGCAAAATAATGTGAAACTAAATAGACACGCCATTCAAAGGGCATGCATCTTCTAAATGTAGCAAATGTGGGGGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CCA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATAATCATGTGCTGGGAGTaGCATCTGATGTATGGGGAG +
Preference number: 2 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWIIMCWE*HLMYGE
Trigger: CTCCCCATACATCAGATGCCACTCCCAGCACATGAT...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR GCA 90 bp TCCTCACAGAGCCTCTCGTGTTTGGCTCTGAGCTGCTTTAAGTCTGAGGAAGCCAGCATCTCCCTGGGCTaGACTGCAGCAGGCTCTGAC +
Preference number: 2 (lower is better)
Translates to: SSQSLSCLALSCFKSEEASISLG*TAAGSD
Trigger: GTCAGAGCCTGCTGCAGTGCAGCCCAGGGAGATGCT...GGCTTCCTCAGACTTAAAGCAGCTCAGAGCCAAACACGAGAGGCTCTGTGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR GCA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATATTCCACCTTTACTGTTaGTGGAAACTTGAAACCCAG +
Preference number: 2 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWIFHLYC*WKLETQ
Trigger: CTGGGTTTCAAGTTTCCAGCAACAGTAAAGGTGGAA...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR GCA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCAGGGACTACAGGTGTGTaGCATTATGCCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: TAPWVVPAALDTDSKDPAGTTGV*HYAWLI
Trigger: AATTAGCCAGGCATAATGGCACACACCTGTAGTCCC...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CCA 90 bp AAACTCATGCTCACATCCCTGGCTGGTTCTACAGGCCTTCCACCAGGACCTCTGCACATACCCCCTTACTaGCCCTTTGTTGGTCCCGAA +
Preference number: 2 (lower is better)
Translates to: KLMLTSLAGSTGLPPGPLHIPPY*PFVGPE
Trigger: TTCGGGACCAACAAAGGGCCAGTAAGGGGGTATGTG...CAGAGGTCCTGGTGGAAGGCCTGTAGAACCAGCCAGGGATGTGAGCATGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CCA 90 bp TCCTCACAGAGCCTCTCGTGTTTGGCTCTGAGCTGCTTTAAGTCTGAGGAAGCCTCGTGCTGGAGCCAATaGGTTCTCAGAGTGGCTCTC +
Preference number: 2 (lower is better)
Translates to: SSQSLSCLALSCFKSEEASCWSQ*VLRVAL
Trigger: GAGAGCCACTCTGAGAACCCATTGGCTCCAGCACGA...GGCTTCCTCAGACTTAAAGCAGCTCAGAGCCAAACACGAGAGGCTCTGTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CCA 90 bp TCCTCACAGAGCCTCTCGTGTTTGGCTCTGAGCTGCTTTAAGTCTGAGGAAGCCGGCAGTTCCTTCTGCTaGAAGCTGAGGAGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: SSQSLSCLALSCFKSEEAGSSFC*KLRSSA
Trigger: AGCAGAACTCCTCAGCTTCCAGCAGAAGGAACTGCC...GGCTTCCTCAGACTTAAAGCAGCTCAGAGCCAAACACGAGAGGCTCTGTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR TCA 90 bp GCGGCACTTTCTGAGCAAGTATCTGAACTGGACCTTTTCCAAGGGAAGCAGTCCACTGACTGGTCTTTCTaGGCCTCCATTTTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: AALSEQVSELDLFQGKQSTDWSF*ASIFSP
Trigger: AGGGGAGAAAATGGAGGCTCAGAAAGACCAGTCAGT...GGACTGCTTCCCTTGGAAAAGGTCCAGTTCAGATACTTGCTCAGAAAGTGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR GCA 90 bp TCCTCACAGAGCCTCTCGTGTTTGGCTCTGAGCTGCTTTAAGTCTGAGGAAGCCAGCCCCGGATCTCAGTaGTGTTGCTTAGTTACAAAG +
Preference number: 2 (lower is better)
Translates to: SSQSLSCLALSCFKSEEASPGSQ*CCLVTK
Trigger: CTTTGTAACTAAGCAACAGCACTGAGATCCGGGGCT...GGCTTCCTCAGACTTAAAGCAGCTCAGAGCCAAACACGAGAGGCTCTGTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CAA 90 bp TGGAAAGATTTGTGGGAGACTCGCAAGCCCCGGATCTCAGTGCTGTaGCTTAGTTACAAAGTAAGTCGCTTCTGGGCTGGGCTGAGAATA +
Preference number: 2 (lower is better)
Translates to: WKDLWETRKPRISVL*LSYKVSRFWAGLRI
Trigger: TATTCTCAGCCCAGCCCAGAAGCGACTTACTTTGTAACTAAGCAACAGCACTGAGATCCGGGGCTTGCGAGTCTCCCACAAATCTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CCA 90 bp GCGGCACTTTCTGAGCAAGTATCTGAACTGGACCTTTTCCAAGGGAAGCAGTCCTTACTGGCCCTTTGTTaGTCCCGAATGGCCAGAATA +
Preference number: 2 (lower is better)
Translates to: AALSEQVSELDLFQGKQSLLALC*SRMARI
Trigger: TATTCTGGCCATTCGGGACCAACAAAGGGCCAGTAA...GGACTGCTTCCCTTGGAAAAGGTCCAGTTCAGATACTTGCTCAGAAAGTGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CCA 90 bp GCGGCACTTTCTGAGCAAGTATCTGAACTGGACCTTTTCCAAGGGAAGCAGTCCAGAAGAAAACACCTGTaGAGTGCCTGGTGTCCAGTA +
Preference number: 2 (lower is better)
Translates to: AALSEQVSELDLFQGKQSRRKHL*SAWCPV
Trigger: TACTGGACACCAGGCACTCCACAGGTGTTTTCTTCT...GGACTGCTTCCCTTGGAAAAGGTCCAGTTCAGATACTTGCTCAGAAAGTGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CAA 90 bp AGCAGGCTTTTCTGTGCAAGGCTTTACTTGTGCTTTGTGTGTGGTTaGGAACTGTCTTCCATCCTCACAGAGCCTCTCGTGTTTGGCTCT +
Preference number: 2 (lower is better)
Translates to: SRLFCARLYLCFVCG*ELSSILTEPLVFGS
Trigger: AGAGCCAAACACGAGAGGCTCTGTGAGGATGGAAGACAGTTCCAAACCACACACAAAGCACAAGTAAAGCCTTGCACAGAAAAGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR TCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTACACACACAGACAGGTaGCAGTTAAAACCCTTCCGA +
Preference number: 2 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCTHTDR*QLKPFR
Trigger: TCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGT...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR-3UTR GCA 90 bp TCCTCACAGAGCCTCTCGTGTTTGGCTCTGAGCTGCTTTAAGTCTGAGGAAGCCCATTTAGAAGATGCATaGCCTTTGAATGGCGTGTCT +
Preference number: 2 (lower is better)
Translates to: SSQSLSCLALSCFKSEEAHLEDA*PLNGVS
Trigger: AGACACGCCATTCAAAGGGCATGCATCTTCTAAATG...GGCTTCCTCAGACTTAAAGCAGCTCAGAGCCAAACACGAGAGGCTCTGTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CAA 90 bp CTAAACCAACAAGCAGGCTTTTCTGTGCAAGGCTTTACTTGTGCTTaGTGTGTGGTTTGGAACTGTCTTCCATCCTCACAGAGCCTCTCG +
Preference number: 2 (lower is better)
Translates to: LNQQAGFSVQGFTCA*CVVWNCLPSSQSLS
Trigger: CGAGAGGCTCTGTGAGGATGGAAGACAGTTCCAAACCACACACAAAGCACAAGTAAAGCCTTGCACAGAAAAGCCTGCTTGTTGGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR TCA 90 bp AAACTCATGCTCACATCCCTGGCTGGTTCTACAGGCCTTCCACCAGGACCTCTGCTGTTGCTGGAAACTTaGAACCCAGAATACAATTTT +
Preference number: 2 (lower is better)
Translates to: KLMLTSLAGSTGLPPGPLLLLET*NPEYNF
Trigger: AAAATTGTATTCTGGGTTTCAAGTTTCCAGCAACAG...CAGAGGTCCTGGTGGAAGGCCTGTAGAACCAGCCAGGGATGTGAGCATGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR TCA 90 bp AGAGCTTTGGGCCATACTTCATTTGCCCCCACATTTGCTACATTTAGAAGATGCGCTGGGAGTGGCATCTaGTGTATGGGGAGATGCAAA +
Preference number: 2 (lower is better)
Translates to: RALGHTSFAPTFATFRRCAGSGI*CMGRCK
Trigger: TTTGCATCTCCCCATACATCAGATGCCACTCCCAGC...GCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGAAGTATGGCCCAAAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CCA 90 bp TCATTTGCCCCCACATTTGCTACATTTAGAAGATGCATGCCCTTTGAATGGCGTTCATGCTCACATCCCTaGCTGGTTCTACAGGCCTTC +
Preference number: 2 (lower is better)
Translates to: SFAPTFATFRRCMPFEWRSCSHP*LVLQAF
Trigger: GAAGGCCTGTAGAACCAGCCAGGGATGTGAGCATGA...ACGCCATTCAAAGGGCATGCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CCA 90 bp CATTCTCCTGTAGTAACTGTAACATACAACTTCTACAGTGTATCTCCGAAGATGGCTCACATCCCTGGCTaGTTCTACAGGCCTTCCACC +
Preference number: 2 (lower is better)
Translates to: HSPVVTVTYNFYSVSPKMAHIPG*FYRPST
Trigger: GGTGGAAGGCCTGTAGAACCAGCCAGGGATGTGAGC...CATCTTCGGAGATACACTGTAGAAGTTGTATGTTACAGTTACTACAGGAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR GCA 90 bp ACCAGGACCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTATTTACGGTTAGACCCTaGAAATTGCAGTTTGTCATG +
Preference number: 2 (lower is better)
Translates to: TRTSGTTSYHVLGVASDVFTVRP*KLQFVM
Trigger: CATGACAAACTGCAATTTGCAGGGTCTAACCGTAAA...TACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CAA 90 bp CAAAGGACACAAGAGCTTTGGGCCATACTTCATTTGCCCCCACATTaGCTACATTTAGAAGATGCATGCCCTTTGAATGGCGTGTCTATT +
Preference number: 2 (lower is better)
Translates to: QRTQELWAILHLPPH*LHLEDACPLNGVSI
Trigger: AATAGACACGCCATTCAAAGGGCATGCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGAAGTATGGCCCAAAGCTCTTGTGTCCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR TCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTACACACACAGACAGGTaGCAGTTAAAACCCTTCCGA +
Preference number: 2 (lower is better)
Translates to: ESVSACTYNITSAVVIISTHTDR*QLKPFR
Trigger: TCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGT...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR-3UTR GCA 90 bp CCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTATGGGGAGTTAGACCCTGCAAATTaGAGTTTGTCATGTAATCTT +
Preference number: 2 (lower is better)
Translates to: PLEPLLIMCWEWHLMYGELDPAN*SLSCNL
Trigger: AAGATTACATGACAAACTGCAATTTGCAGGGTCTAA...CTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR GCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTGGAACAAATGACAACTaGACTTTTGGTATGCAGTAT +
Preference number: 2 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCGTNDN*TFGMQY
Trigger: ATACTGCATACCAAAAGTGCAGTTGTCATTTGTTCC...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR-3UTR GCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGCCACAGTGGATAACATaGTACCTTAGTGGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMPQWIT*YLSGLE
Trigger: TTCCAGGCCACTAAGGTAGCATGTTATCCACTGTGG...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR-3UTR CCA 90 bp TCATTTGCCCCCACATTTGCTACATTTAGAAGATGCATGCCCTTTGAATGGCGTTTCCACCAGGACCTCTaGAACCACTTCTTATCATGT +
Preference number: 2 (lower is better)
Translates to: SFAPTFATFRRCMPFEWRFHQDL*NHFLSC
Trigger: ACATGATAAGAAGTGGTTCCAGAGGTCCTGGTGGAA...ACGCCATTCAAAGGGCATGCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR TCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCACTCTGCTCTGCTGAATaGTCCCAGTGGACTAGGCGA +
Preference number: 2 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPLCSAE*SQWTRR
Trigger: TCGCCTAGTCCACTGGGATCATTCAGCAGAGCAGAG...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR-3UTR TCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGACTCATGGCGCTTACTaGCTAGATTTTCCTAACCGA +
Preference number: 2 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMTHGAY*LDFPNR
Trigger: TCGGTTAGGAAAATCTAGTCAGTAAGCGCCATGAGT...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR-3UTR CCA 90 bp CATTCTCCTGTAGTAACTGTAACATACAACTTCTACAGTGTATCTCCGAAGATGGTGGCATCTGATGTATaGGGAGATGCAAATTCCCAC +
Preference number: 2 (lower is better)
Translates to: HSPVVTVTYNFYSVSPKMVASDV*GDANSH
Trigger: GTGGGAATTTGCATCTCCCCATACATCAGATGCCAC...CATCTTCGGAGATACACTGTAGAAGTTGTATGTTACAGTTACTACAGGAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CCA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGAAAAGCCAGCTCACTTaGGAACAAATGACAACTGCA +
Preference number: 2 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWKSQLT*EQMTTA
Trigger: TGCAGTTGTCATTTGTTCCCAAGTGAGCTGGCTTTT...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR-3UTR TCA 90 bp CATTCTCCTGTAGTAACTGTAACATACAACTTCTACAGTGTATCTCCGAAGATGGAGTTCTGCTGTCATTaGTTCCTGTTTCTAGAGGAC +
Preference number: 2 (lower is better)
Translates to: HSPVVTVTYNFYSVSPKMEFCCH*FLFLED
Trigger: GTCCTCTAGAAACAGGAATCAATGACAGCAGAACTC...CATCTTCGGAGATACACTGTAGAAGTTGTATGTTACAGTTACTACAGGAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR TCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGTCACTTGGGAACAAATaGCAACTGCACTTTTGGTAT +
Preference number: 2 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMSLGNK*QLHFWY
Trigger: ATACCAAAAGTGCAGTTGTCATTTGTTCCCAAGTGA...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR-3UTR GCA 90 bp CATTCTCCTGTAGTAACTGTAACATACAACTTCTACAGTGTATCTCCGAAGATGCATTTCCTAAACTCATaGTCACATCCCTGGCTGGTT +
Preference number: 2 (lower is better)
Translates to: HSPVVTVTYNFYSVSPKMHFLNS*SHPWLV
Trigger: AACCAGCCAGGGATGTGAGCATGAGTTTAGGAAATG...CATCTTCGGAGATACACTGTAGAAGTTGTATGTTACAGTTACTACAGGAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAAGTAGATCAGAGCCCTaGTGTAGATGTGCACACGTG +
Preference number: 2 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPSRSEP*CRCAHV
Trigger: CACGTGTGCACATCTACACCAGGGCTCTGATCTACT...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR-3UTR TCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGCTTAAAAAGGCTCCCTaGTGTCCTCATTATAAATCT +
Preference number: 2 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMLKKAP*CPHYKS
Trigger: AGATTTATAATGAGGACATCAGGGAGCCTTTTTAAG...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR-3UTR CCA 90 bp AACATAACTAGCTGGCAAAGGTCTCGTATAAGTTGGGATTCTAAAGTGTTTGGACTTCTTATCATGTGCTaGGAGTGGCATCTGATGTAT +
Preference number: 2 (lower is better)
Translates to: NITSWQRSRISWDSKVFGLLIMC*EWHLMY
Trigger: ATACATCAGATGCCACTCCCAGCACATGATAAGAAG...TCCAAACACTTTAGAATCCCAACTTATACGAGACCTTTGCCAGCTAGTTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CCA 90 bp CATTCTCCTGTAGTAACTGTAACATACAACTTCTACAGTGTATCTCCGAAGATGAAAGTAAGTCGCTTCTaGGCTGGGCTGAGAATATAT +
Preference number: 2 (lower is better)
Translates to: HSPVVTVTYNFYSVSPKMKVSRF*AGLRIY
Trigger: ATATATTCTCAGCCCAGCCCAGAAGCGACTTACTTT...CATCTTCGGAGATACACTGTAGAAGTTGTATGTTACAGTTACTACAGGAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR GCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGTTTTCCAGATTATGTTaGATCAGGCTTTCTGGATTA +
Preference number: 2 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMFSRLC*IRLSGL
Trigger: TAATCCAGAAAGCCTGATGCAACATAATCTGGAAAA...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR-3UTR CCA 90 bp AACATAACTAGCTGGCAAAGGTCTCGTATAAGTTGGGATTCTAAAGTGTTTGGACACCTTTACTGTTGCTaGAAACTTGAAACCCAGAAT +
Preference number: 2 (lower is better)
Translates to: NITSWQRSRISWDSKVFGHLYCC*KLETQN
Trigger: ATTCTGGGTTTCAAGTTTCCAGCAACAGTAAAGGTG...TCCAAACACTTTAGAATCCCAACTTATACGAGACCTTTGCCAGCTAGTTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CCA 90 bp AACATAACTAGCTGGCAAAGGTCTCGTATAAGTTGGGATTCTAAAGTGTTTGGATTTGTTGGTCCCGAATaGCCAGAATACATAGATGTT +
Preference number: 2 (lower is better)
Translates to: NITSWQRSRISWDSKVFGFVGPE*PEYIDV
Trigger: AACATCTATGTATTCTGGCCATTCGGGACCAACAAA...TCCAAACACTTTAGAATCCCAACTTATACGAGACCTTTGCCAGCTAGTTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCATGGGAAGAATACTCATaGCGCTTACTGACTAGATTT +
Preference number: 2 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPWEEYS*RLLTRF
Trigger: AAATCTAGTCAGTAAGCGCCATGAGTATTCTTCCCA...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR-3UTR GCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAGAGAATAAAAAGCCCTaGATTAAACGTGTTCACATG +
Preference number: 2 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPENKKP*IKRVHM
Trigger: CATGTGAACACGTTTAATGCAGGGCTTTTTATTCTC...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR GCA 72 bp CCAGACAGCAAGGCTGGGTCCAGCATCTCCCTGGGCTaGACTGCAGCAGGCTCTGACCAGACGGCGTCGTGC +
Preference number: 3 (lower is better)
Translates to: PDSKAGSSISLG*TAAGSDQTASC
Trigger: GCACGACGCCGTCTGGTCAGAGCCTGCTGCAGTGCAGCCCAGGGAGATGCTGGACCCAGCCTTGCTGTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR GCA 72 bp GGCTGCACTGCAGCAGGCTCTGACCAGACGGCGTCGTaGTGGAGCCAATGGGTTCTCAGAGTGGCTCTCTGG +
Preference number: 3 (lower is better)
Translates to: GCTAAGSDQTAS*WSQWVLRVALW
Trigger: CCAGAGAGCCACTCTGAGAACCCATTGGCTCCAGCACGACGCCGTCTGGTCAGAGCCTGCTGCAGTGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp TTGGGACACAGTCGTGCTCCGTCATCCAGGCTGAGGTaGTTGCGGCACAATCACGGCTCACTGCAACCTCGG +
Preference number: 3 (lower is better)
Translates to: LGHSRAPSSRLR*LRHNHGSLQPR
Trigger: CCGAGGTTGCAGTGAGCCGTGATTGTGCCGCAACCACCTCAGCCTGGATGACGGAGCACGACTGTGTCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp GGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTaGATACAGACTCCAAAGACCCGGCATGAAGTCTTG +
Preference number: 3 (lower is better)
Translates to: GHRLPPGLCQQH*IQTPKTRHEVL
Trigger: CAAGACTTCATGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp TGCACTGCAGCAGGCTCTGACCAGACGGCGTCGTGCTaGAGCCAATGGGTTCTCAGAGTGGCTCTCTGGTTA +
Preference number: 3 (lower is better)
Translates to: CTAAGSDQTASC*SQWVLRVALWL
Trigger: TAACCAGAGAGCCACTCTGAGAACCCATTGGCTCCAGCACGACGCCGTCTGGTCAGAGCCTGCTGCAGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp GCAGGCTCTGACCAGACGGCGTCGTGCTGGAGCCAATaGGTTCTCAGAGTGGCTCTCTGGTTAGAGAAAGGA +
Preference number: 3 (lower is better)
Translates to: AGSDQTASCWSQ*VLRVALWLEKG
Trigger: TCCTTTCTCTAACCAGAGAGCCACTCTGAGAACCCATTGGCTCCAGCACGACGCCGTCTGGTCAGAGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR GCA 72 bp CCATCCTCACAGAGCCTCTCGTGTTTGGCTCTGAGCTaGTTTAAGTCTGAGGAAGCCAGACAGCAAGGCTGG +
Preference number: 3 (lower is better)
Translates to: PSSQSLSCLALS*FKSEEARQQGW
Trigger: CCAGCCTTGCTGTCTGGCTTCCTCAGACTTAAAGCAGCTCAGAGCCAAACACGAGAGGCTCTGTGAGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp ATGCTACACCATTTCCTAAACTCATGCTCACATCCCTaGCTGGTTCTACAGGCCTTCCACCAGGACCTCTGG +
Preference number: 3 (lower is better)
Translates to: MLHHFLNSCSHP*LVLQAFHQDLW
Trigger: CCAGAGGTCCTGGTGGAAGGCCTGTAGAACCAGCCAGGGATGTGAGCATGAGTTTAGGAAATGGTGTAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp TCGTGCTGGAGCCAATGGGTTCTCAGAGTGGCTCTCTaGTTAGAGAAAGGATTCAGAGGCAGCCCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: SCWSQWVLRVAL*LEKGFRGSPGK
Trigger: TTTTCCTGGGCTGCCTCTGAATCCTTTCTCTAACCAGAGAGCCACTCTGAGAACCCATTGGCTCCAGCACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CAA 90 bp GCGGCACTTTCTGAGCAAGTATCTGAACTGGACCTTTTCCAAGGGAAGCAGTCCCTTACTGGCCCTTTGTaGGTCCCGAATGGCCAGAAT +
Preference number: 3 (lower is better)
Translates to: AALSEQVSELDLFQGKQSLTGPL*VPNGQN
Trigger: ATTCTGGCCATTCGGGACCAACAAAGGGCCAGTAAG...GGACTGCTTCCCTTGGAAAAGGTCCAGTTCAGATACTTGCTCAGAAAGTGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CAA 90 bp AGAGCTTTGGGCCATACTTCATTTGCCCCCACATTTGCTACATTTAGAAGATGCCCCCTTACTGGCCCTTaGTTGGTCCCGAATGGCCAG +
Preference number: 3 (lower is better)
Translates to: RALGHTSFAPTFATFRRCPLTGP*LVPNGQ
Trigger: CTGGCCATTCGGGACCAACAAAGGGCCAGTAAGGGG...GCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGAAGTATGGCCCAAAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CAA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTAGAAGGCCTTCTTACTaGGACATCTCCAAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCRRPSY*DISKWQ
Trigger: CTGCCACTTGGAGATGTCCAAGTAAGAAGGCCTTCT...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR TCA 72 bp TGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTaGTGTATGGGGAGATGCAAATTCCCACATACCCCC +
Preference number: 3 (lower is better)
Translates to: WNHFLSCAGSGI*CMGRCKFPHTP
Trigger: GGGGGTATGTGGGAATTTGCATCTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp GTATGGGGAGATGCAAATTCCCACATACCCCCTTACTaGCCCTTTGTTGGTCCCGAATGGCCAGAATACATA +
Preference number: 3 (lower is better)
Translates to: VWGDANSHIPPY*PFVGPEWPEYI
Trigger: TATGTATTCTGGCCATTCGGGACCAACAAAGGGCCAGTAAGGGGGTATGTGGGAATTTGCATCTCCCCATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp GGACCTCTGGAACCACTTCTTATCATGTGCTGGGAGTaGCATCTGATGTATGGGGAGATGCAAATTCCCACA +
Preference number: 3 (lower is better)
Translates to: GPLEPLLIMCWE*HLMYGEMQIPT
Trigger: TGTGGGAATTTGCATCTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp CCACCAGGACCTCTGGAACCACTTCTTATCATGTGCTaGGAGTGGCATCTGATGTATGGGGAGATGCAAATT +
Preference number: 3 (lower is better)
Translates to: PPGPLEPLLIMC*EWHLMYGEMQI
Trigger: AATTTGCATCTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCCTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp ACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTATaGGGAGATGCAAATTCCCACATACCCCCTTACTGG +
Preference number: 3 (lower is better)
Translates to: TSYHVLGVASDV*GDANSHIPPYW
Trigger: CCAGTAAGGGGGTATGTGGGAATTTGCATCTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp CATTTTAAAGTGGCAGGGTTAGCAGCGGCATTAGGTTaGTTAGTGGAAAGATTTGTGGGAGACTCGCAAGCC +
Preference number: 3 (lower is better)
Translates to: HFKVAGLAAALG*LVERFVGDSQA
Trigger: GGCTTGCGAGTCTCCCACAAATCTTTCCACTAACCAACCTAATGCCGCTGCTAACCCTGCCACTTTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp TCTGTGCAAGGCTTTACTTGTGCTTTGTGTGTGGTTTaGAACTGTCTTCCATCCTCACAGAGCCTCTCGTGT +
Preference number: 3 (lower is better)
Translates to: SVQGFTCALCVV*NCLPSSQSLSC
Trigger: ACACGAGAGGCTCTGTGAGGATGGAAGACAGTTCCAAACCACACACAAAGCACAAGTAAAGCCTTGCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CAA 90 bp TCCTCACAGAGCCTCTCGTGTTTGGCTCTGAGCTGCTTTAAGTCTGAGGAAGCCACTGTTGCTGGAAACTaGAAACCCAGAATACAATTT +
Preference number: 3 (lower is better)
Translates to: SSQSLSCLALSCFKSEEATVAGN*KPRIQF
Trigger: AAATTGTATTCTGGGTTTCAAGTTTCCAGCAACAGT...GGCTTCCTCAGACTTAAAGCAGCTCAGAGCCAAACACGAGAGGCTCTGTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp TGCAAATTCCCACATACCCCCTTACTGGCCCTTTGTTaGTCCCGAATGGCCAGAATACATAGATGTTCAGTA +
Preference number: 3 (lower is better)
Translates to: CKFPHTPLLALC*SRMARIHRCSV
Trigger: TACTGAACATCTATGTATTCTGGCCATTCGGGACCAACAAAGGGCCAGTAAGGGGGTATGTGGGAATTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CCA 72 bp GCTTTTCTGTGCAAGGCTTTACTTGTGCTTTGTGTGTaGTTTGGAACTGTCTTCCATCCTCACAGAGCCTCT +
Preference number: 3 (lower is better)
Translates to: AFLCKALLVLCV*FGTVFHPHRAS
Trigger: AGAGGCTCTGTGAGGATGGAAGACAGTTCCAAACCACACACAAAGCACAAGTAAAGCCTTGCACAGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CAA 90 bp TGCATGCCCTTTGAATGGCGTGTCTATTTAGTTTCACATTATTTTGCTAGATTTTGCAACCTCGGCCTCTaGAGCTCAGGTGATCCTCCC +
Preference number: 3 (lower is better)
Translates to: CMPFEWRVYLVSHYFARFCNLGL*SSGDPP
Trigger: GGGAGGATCACCTGAGCTCAAGAGGCCGAGGTTGCA...AAATCTAGCAAAATAATGTGAAACTAAATAGACACGCCATTCAAAGGGCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CAA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTAGAAGGCCTTCTTACTaGGACATCTCCAAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: ESVSACTYNITSAVVIISRRPSY*DISKWQ
Trigger: CTGCCACTTGGAGATGTCCAAGTAAGAAGGCCTTCT...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR CCA 72 bp CACATACCCCCTTACTGGCCCTTTGTTGGTCCCGAATaGCCAGAATACATAGATGTTCAGTACCAAAATTAC +
Preference number: 3 (lower is better)
Translates to: HIPPYWPFVGPE*PEYIDVQYQNY
Trigger: GTAATTTTGGTACTGAACATCTATGTATTCTGGCCATTCGGGACCAACAAAGGGCCAGTAAGGGGGTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CAA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTATGACAACTGCACTTTaGGTATGCAGTATGCAAACA +
Preference number: 3 (lower is better)
Translates to: ESVSACTYNITSAVVIISMTTAL*VCSMQT
Trigger: TGTTTGCATACTGCATACCAAAAGTGCAGTTGTCAT...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR-3UTR CAA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGGTTTTCCAGATTATGTaGCATCAGGCTTTCTGGATT +
Preference number: 3 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMVFQIM*HQAFWI
Trigger: AATCCAGAAAGCCTGATGCAACATAATCTGGAAAAC...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR GCA 72 bp ACTTCATTTGCCCCCACATTTGCTACATTTAGAAGATaGATGCCCTTTGAATGGCGTGTCTATTTAGTTTCA +
Preference number: 3 (lower is better)
Translates to: TSFAPTFATFRR*MPFEWRVYLVS
Trigger: TGAAACTAAATAGACACGCCATTCAAAGGGCATGCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR-3UTR CAA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAAAAAAGCCAGCTCACTaGGGAACAAATGACAACTGC +
Preference number: 3 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPKKPAH*GTNDNC
Trigger: GCAGTTGTCATTTGTTCCCAAGTGAGCTGGCTTTTT...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR TCA 72 bp CCATTTAGTTATGGGAAGAATACTCATGGCGCTTACTaGCTAGATTTTCCTAACCGATTGGGATTAAAACAA +
Preference number: 3 (lower is better)
Translates to: PFSYGKNTHGAY*LDFPNRLGLKQ
Trigger: TTGTTTTAATCCCAATCGGTTAGGAAAATCTAGTCAGTAAGCGCCATGAGTATTCTTCCCATAACTAAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR TCA 72 bp AACTGTAACACTCCAAAGGTTATTACAACTTTGAACTaGAATGGTACCATCTATATCATAGATGGCTCTCCC +
Preference number: 3 (lower is better)
Translates to: NCNTPKVITTLN*NGTIYIIDGSP
Trigger: GGGAGAGCCATCTATGATATAGATGGTACCATTTCAGTTCAAAGTTGTAATAACCTTTGGAGTGTTACAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCAGCCAGACAGCAAGGCTaGGTCCAGCATCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TAPWVVPAALDTDSKDPAARQQG*VQHLPG
Trigger: CCCAGGGAGATGCTGGACCCAGCCTTGCTGTCTGGC...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp AAACTCATGCTCACATCCCTGGCTGGTTCTACAGGCCTTCCACCAGGACCTCTGCCCGTGGCCACAGACTaGCCCCTGGGTTGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KLMLTSLAGSTGLPPGPLPVATD*PLGCAS
Trigger: GCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGG...CAGAGGTCCTGGTGGAAGGCCTGTAGAACCAGCCAGGGATGTGAGCATGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCAAGCATCTCCCTGGGCTaGACTGCAGCAGGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: TAPWVVPAALDTDSKDPASISLG*TAAGSD
Trigger: GTCAGAGCCTGCTGCAGTGCAGCCCAGGGAGATGCT...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp AAACTCATGCTCACATCCCTGGCTGGTTCTACAGGCCTTCCACCAGGACCTCTGCACTGCAGCAGGCTCTaGCCAGACGGCGTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: KLMLTSLAGSTGLPPGPLHCSRL*PDGVVL
Trigger: CAGCACGACGCCGTCTGGTCAGAGCCTGCTGCAGTG...CAGAGGTCCTGGTGGAAGGCCTGTAGAACCAGCCAGGGATGTGAGCATGAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTTGCGGGCCGCCGGAGTaGCCGACGGGGGCTACATGC +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCCGPPE*PTGATC
Trigger: GCATGTAGCCCCCGTCGGGCACTCCGGCGGCCCGCA...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR CCA 90 bp TCCTCACAGAGCCTCTCGTGTTTGGCTCTGAGCTGCTTTAAGTCTGAGGAAGCCGGGAAGCAGTCCCCGTaGCCACAGACTGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSQSLSCLALSCFKSEEAGKQSP*PQTAPW
Trigger: CCAGGGGGCAGTCTGTGGCCACGGGGACTGCTTCCC...GGCTTCCTCAGACTTAAAGCAGCTCAGAGCCAAACACGAGAGGCTCTGTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTGCACACACGCGACGGTaGGGGGTGGGCGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCAHTRR*GVGVSC
Trigger: GCAGCTGACGCCCACCCCCCACCGTCGCGTGTGTGC...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR GCA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATATGTTTGGCTCTGAGCTaGTTTAAGTCTGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWICLALS*FKSEEA
Trigger: GGCTTCCTCAGACTTAAAGCAGCTCAGAGCCAAACA...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCCGGACAAGGGGGCGGTaGCCCCGGCTCGGACAGCGT +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLRTRGR*PRLGQR
Trigger: ACGCTGTCCGAGCCGGGGGCACCGCCCCCTTGTCCG...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGGAGGGCAGAGCGGCTaGTTGCAGGGGGTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSAGGQSG*LQGVQA
Trigger: CGCCTGCACCCCCTGCAAGCAGCCGCTCTGCCCTCC...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619412.4
CDS-3UTR CCA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCAGGCAGTTCCTTCTGCTaGAAGCTGAGGAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TAPWVVPAALDTDSKDPAGSSFC*KLRSSA
Trigger: AGCAGAACTCCTCAGCTTCCAGCAGAAGGAACTGCC...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTCCCCGCCAGCTTCGGTaGGGGCACCTTCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSAPRQLR*GHLRRW
Trigger: CCACCTCCGAAGGTGCCCCCACCGAAGCTGGCGGGG...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATATCCTTTAGAAGTGACTaGACAACCCATGAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWISFRSD*TTHEAY
Trigger: GTAGGCTTCATGGGTTGTTCAGTCACTTCTAAAGGA...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGTCTCTATTGTCATaGTGTATCGCCCAATGGCTA +
Preference number: 4 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWIQSLLS*CIAQWL
Trigger: TAGCCATTGGGCGATACAGCATGACAATAGAGACTG...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATAGGGCCATACTTCATTTaGCCCCACATTTGCTACATT +
Preference number: 4 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWIGPYFI*PHICYI
Trigger: AATGTAGCAAATGTGGGGGCAAATGAAGTATGGCCC...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTAAGAGACTTCGGCCCTaGTGCTCCCAGGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSKRLRP*CSQAAA
Trigger: GGCCGCCGCCTGGGAGCAGCAGGGCCGAAGTCTCTT...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR GCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCGGCAGAGCGGCTGCTTaGAGGGGGTGCAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLGRAAA*RGCRRG
Trigger: TCCCCGCCTGCACCCCCTGCAAGCAGCCGCTCTGCC...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619412.4
CDS-3UTR CCA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATAAGCAAGTATCTGAACTaGACCTTTTCCAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWISKYLN*TFSKGS
Trigger: GCTTCCCTTGGAAAAGGTCCAGTTCAGATACTTGCT...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTGGGCACCTTCGGAGGTaGGAGAAGAGGGCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSGHLRR*EKRAEG
Trigger: GCCCTCCGCCCTCTTCTCCCACCTCCGAAGGTGCCC...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTGATGGGCGCGAGCTTTaGGGACGCGAGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSDGREL*GREGGS
Trigger: GCTCCCTCCCTCGCGTCCCCAAAGCTCGCGCCCATC...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR TCA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCATCCAGTTCAGTGATATaGCGTAGGTCCAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TAPWVVPAALDTDSKDPASSSVI*RRSKLE
Trigger: TTCCAGCTTGGACCTACGTCATATCACTGAACTGGA...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATAAAGATGCATGCCCTTTaGATGGCGTGTCTATTTAGT +
Preference number: 4 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWIKMHAL*MACLFS
Trigger: ACTAAATAGACACGCCATTCAAAGGGCATGCATCTT...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGAGGGAGCTCGGCCGGTaGCGGTGTCGGCCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMRELGR*RCRPPE
Trigger: TTCCGGGGGCCGACACCGTCACCGGCCGAGCTCCCT...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR GCA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCAGGTCACGCCAGTACTTaGAAACCAATGATGCGGAAA +
Preference number: 4 (lower is better)
Translates to: TAPWVVPAALDTDSKDPAGHAST*KPMMRK
Trigger: TTTCCGCATCATTGGTTTGCAAGTACTGGCGTGACC...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp TGGTTAGTGGAAAGATTTGTGGGAGACTCGCAAGCCCCGGATCTCAGTGCTGTTCTGCCCCCTGGGTTGTaGCAGCAGCACTGGATACAG +
Preference number: 4 (lower is better)
Translates to: WLVERFVGDSQAPDLSAVLPPGL*QQHWIQ
Trigger: CTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAG...AACAGCACTGAGATCCGGGGCTTGCGAGTCTCCCACAAATCTTTCCACTAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp GCGGCACTTTCTGAGCAAGTATCTGAACTGGACCTTTTCCAAGGGAAGCAGTCCGACCAGACGGCGTCGTaGTGGAGCCAATGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: AALSEQVSELDLFQGKQSDQTAS*WSQWVL
Trigger: GAGAACCCATTGGCTCCAGCACGACGCCGTCTGGTC...GGACTGCTTCCCTTGGAAAAGGTCCAGTTCAGATACTTGCTCAGAAAGTGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGCGGACAAGGGGGCGGTaGCCCCGGCTCGGACAGCGT +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMRTRGR*PRLGQR
Trigger: ACGCTGTCCGAGCCGGGGGCACCGCCCCCTTGTCCG...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCAGACGTAGGTCCAAGCTaGAAAGGTTTCTTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: TAPWVVPAALDTDSKDPADVGPS*KGFLAW
Trigger: CCAAGCTAAGAAACCTTTCCAGCTTGGACCTACGTC...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCATTACTGGCCCTTTGTTaGTCCCGAATGGCCAGAATA +
Preference number: 4 (lower is better)
Translates to: TAPWVVPAALDTDSKDPALLALC*SRMARI
Trigger: TATTCTGGCCATTCGGGACCAACAAAGGGCCAGTAA...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCAGTGGCATCTGATGTATaGGGAGATGCAAATTCCCAC +
Preference number: 4 (lower is better)
Translates to: TAPWVVPAALDTDSKDPAVASDV*GDANSH
Trigger: GTGGGAATTTGCATCTCCCCATACATCAGATGCCAC...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTCATTCATGCTGCTGCTaGGCGGACAAGGGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCHSCCC*ADKGAV
Trigger: CACCGCCCCCTTGTCCGCCCAGCAGCAGCATGAATG...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GCGGCACTTTCTGAGCAAGTATCTGAACTGGACCTTTTCCAAGGGAAGCAGTCCCGAGGGAACAGGCACTaGGAGGTTAGTAACTGCCCG +
Preference number: 4 (lower is better)
Translates to: AALSEQVSELDLFQGKQSRGNRH*EVSNCP
Trigger: CGGGCAGTTACTAACCTCTCAGTGCCTGTTCCCTCG...GGACTGCTTCCCTTGGAAAAGGTCCAGTTCAGATACTTGCTCAGAAAGTGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCAGTATCATCCTCATTTTaGAAACGAGGGAACAGGCAC +
Preference number: 4 (lower is better)
Translates to: TAPWVVPAALDTDSKDPAVSSSF*KRGNRH
Trigger: GTGCCTGTTCCCTCGTTTGCAAAATGAGGATGATAC...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTGCGTCGCCACATTCATaGTGCTGCTGGGCGGACAAG +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCASPHS*CCWADK
Trigger: CTTGTCCGCCCAGCAGCAGCATGAATGTGGCGACGC...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTTCGGACCATTTTAACTaGGGATCCGCCGCCGGCGCG +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSSDHFN*GSAAGA
Trigger: CGCGCCGGCGGCGGATCCGCAGTTAAAATGGTCCGA...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR GCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGGCGGCGGCACCAACTaGAACAGCGAGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSAGGGTN*NSEASS
Trigger: AGAAGAGGCCTCGCTGTTGCAGTTGGTGCCGCCGCC...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR GCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTGGCGCGCCGGGACTGTaGACGATGAAGCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSGAPGL*TMKQSM
Trigger: CATGCTCTGCTTCATCGTGCACAGTCCCGGCGCGCC...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR GCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCCCAGCCCCAACTCTTTaGAGCAGGAGGCGGGCGACG +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLPAPTL*SRRRAT
Trigger: CGTCGCCCGCCTCCTGCTGCAAAGAGTTGGGGCTGG...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR GCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGAGACTTCGGCCCTGCTaGTCCCAGGCGGCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMRLRPC*SQAAAA
Trigger: TGCGGCCGCCGCCTGGGAGCAGCAGGGCCGAAGTCT...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR CCA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATAAGCTGCTTCCAAAACTaGAAGTCTAAACAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWISCFQN*KSKQRS
Trigger: TGACCTTTGTTTAGACTTCCAGTTTTGGAAGCAGCT...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AAACTCATGCTCACATCCCTGGCTGGTTCTACAGGCCTTCCACCAGGACCTCTGCCATGTTGTCCAGGCTaGTCTCAAATTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KLMLTSLAGSTGLPPGPLPCCPG*SQIPGL
Trigger: GAGCCCAGGAATTTGAGACCAGCCTGGACAACATGG...CAGAGGTCCTGGTGGAAGGCCTGTAGAACCAGCCAGGGATGTGAGCATGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCAGCTTTGTGTGTGGTTTaGAACTGTCTTCCATCCTCA +
Preference number: 4 (lower is better)
Translates to: TAPWVVPAALDTDSKDPAALCVV*NCLPSS
Trigger: TGAGGATGGAAGACAGTTCCAAACCACACACAAAGC...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTCCCCGCCAGCTTCGGTaGGGGCACCTTCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISPRQLR*GHLRRW
Trigger: CCACCTCCGAAGGTGCCCCCACCGAAGCTGGCGGGG...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATAGAAGGAGAGAGGATATaGCATCAAGCTATTAACTAT +
Preference number: 4 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWIEGERI*HQAINY
Trigger: ATAGTTAATAGCTTGATGTCATATCCTCTCTCCTTC...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp ACCAGGACCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTAGTATCCTGGGGCCACTaGCTGGTCTTTCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: TRTSGTTSYHVLGVASDVVSWGH*LVFLSL
Trigger: GAGGCTCAGAAAGACCAGTCAGTGGCCCCAGGATAC...TACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCCGGGACTGTGCACGATaGAGCAGAGCATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLRDCAR*SRACRA
Trigger: GGCCCTGCATGCTCTGCTTCATCGTGCACAGTCCCG...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR GCA 90 bp TGGTTAGTGGAAAGATTTGTGGGAGACTCGCAAGCCCCGGATCTCAGTGCTGTTTTTGGGACACAGTCGTaGTCCGTCATCCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WLVERFVGDSQAPDLSAVFGTQS*SVIQAE
Trigger: CTCAGCCTGGATGACGGAGCACGACTGTGTCCCAAA...AACAGCACTGAGATCCGGGGCTTGCGAGTCTCCCACAAATCTTTCCACTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTTCGCCACATTCATGCTaGTGCTGGGCGGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSASPHSC*CWADKG
Trigger: CCCCTTGTCCGCCCAGCAGCAGCATGAATGTGGCGA...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGGGGCACCTTCGGAGGTaGGAGAAGAGGGCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMGHLRR*EKRAEG
Trigger: GCCCTCCGCCCTCTTCTCCCACCTCCGAAGGTGCCC...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGCAGCGAGGCCTCTTCTaGCTCGGGCGGTTACGCGGC +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMQRGLF*LGRLRG
Trigger: GCCGCGTAACCGCCCGAGCCAGAAGAGGCCTCGCTG...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR CCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTAGGCGGCAGACATGTTaGGGGTCCAGCCCATCTGAT +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCRRQTC*GSSPSD
Trigger: ATCAGATGGGCTGGACCCCCAACATGTCTGCCGCCT...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTACGGCGGCAGCTGGTTaGTGTCTGGGGTTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISTAAAG*CLGFRG
Trigger: CCCCCGAAACCCCAGACATCAACCAGCTGCCGCCGT...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTCTCTGCTCTGCTGAATaGTCCCAGTGGACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCLCSAE*SQWTRR
Trigger: TCGCCTAGTCCACTGGGATCATTCAGCAGAGCAGAG...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTATGTGGGGGTACTGCTaGACCAGCTGTTCCACCGTC +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSMWGYC*TSCSTV
Trigger: GACGGTGGAACAGCTGGTGCAGCAGTACCCCCACAT...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTGTGATGTGGGGGTACTaGTGCACCAGCTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSVMWGY*CTSCST
Trigger: GGTGGAACAGCTGGTGCAGCAGTACCCCCACATCAC...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTGTCCTCTTGCAGTCCTaGAGGACGGTGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSVLLQS*RTVLKV
Trigger: CACCTTCAGCACCGTCCTGCAGGACTGCAAGAGGAC...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTTCTCCAAGGTCCTCTTaGAGTCCTGCAGGACGGTGC +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSASPRSS*SPAGRC
Trigger: GCACCGTCCTGCAGGACTGCAAGAGGACCTTGGAGA...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCATTTGTTGGTCCCGAATaGCCAGAATACATAGATGTT +
Preference number: 4 (lower is better)
Translates to: TAPWVVPAALDTDSKDPAFVGPE*PEYIDV
Trigger: AACATCTATGTATTCTGGCCATTCGGGACCAACAAA...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp TGGTTAGTGGAAAGATTTGTGGGAGACTCGCAAGCCCCGGATCTCAGTGCTGTTTCATGCTCACATCCCTaGCTGGTTCTACAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WLVERFVGDSQAPDLSAVSCSHP*LVLQAF
Trigger: GAAGGCCTGTAGAACCAGCCAGGGATGTGAGCATGA...AACAGCACTGAGATCCGGGGCTTGCGAGTCTCCCACAAATCTTTCCACTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTATGGACGGCGGCAGCTaGTTGATGTCTGGGGTTTCG +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSMDGGS*LMSGVS
Trigger: CGAAACCCCAGACATCAACCAGCTGCCGCCGTCCAT...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTGCACCGGCCCCAAGCTaGCCAGGAAGAGACTTCGGC +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISAPAPS*PGRDFG
Trigger: GCCGAAGTCTCTTCCTGGCCAGCTTGGGGCCGGTGC...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR CCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTAGGCGGCAGACATGTTaGGGGTCCAGCCCATCTGAT +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSRRQTC*GSSPSD
Trigger: ATCAGATGGGCTGGACCCCCAACATGTCTGCCGCCT...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp TGGTTAGTGGAAAGATTTGTGGGAGACTCGCAAGCCCCGGATCTCAGTGCTGTTGTACTTGCAAACCAATaGTGCGGAAAGGCAACGCTC +
Preference number: 4 (lower is better)
Translates to: WLVERFVGDSQAPDLSAVVLANQ*CGKATL
Trigger: GAGCGTTGCCTTTCCGCATCATTGGTTTGCAAGTAC...AACAGCACTGAGATCCGGGGCTTGCGAGTCTCCCACAAATCTTTCCACTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp CCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTATGGGGAGTCATCAGTGACCTGCTaGCGACTACTAAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: PLEPLLIMCWEWHLMYGESSVTC*RLLRSS
Trigger: GCTGGATCTTAGTAGTCGTCAGCAGGTCACTGATGA...CTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp ACCAGGACCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTAGCTGGGAGTGGCATCTaGTGTATGGGGAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: TRTSGTTSYHVLGVASDVAGSGI*CMGRCK
Trigger: TTTGCATCTCCCCATACATCAGATGCCACTCCCAGC...TACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp TGGTTAGTGGAAAGATTTGTGGGAGACTCGCAAGCCCCGGATCTCAGTGCTGTTTCTCGTGTTTGGCTCTaGGCTGCTTTAAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: WLVERFVGDSQAPDLSAVSRVWL*AALSLR
Trigger: CCTCAGACTTAAAGCAGCTCAGAGCCAAACACGAGA...AACAGCACTGAGATCCGGGGCTTGCGAGTCTCCCACAAATCTTTCCACTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp CCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTATGGGGAGATCTCAGAGACTTGCTaGTCTGTGCAATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PLEPLLIMCWEWHLMYGEISETC*SVQSGW
Trigger: CCACCCTGATTGCACAGAGCAGCAAGTCTCTGAGAT...CTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGCCACATTCATGCTGCTaGTGGGCGGACAAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWPHSCC*WADKGA
Trigger: CGCCCCCTTGTCCGCCCAGCAGCAGCATGAATGTGG...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCGTGATGTGGGGGTACTaGTGCACCAGCTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLVMWGY*CTSCST
Trigger: GGTGGAACAGCTGGTGCAGCAGTACCCCCACATCAC...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCTCTCCAAGGTCCTCTTaGAGTCCTGCAGGACGGTGC +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLSPRSS*SPAGRC
Trigger: GCACCGTCCTGCAGGACTGCAAGAGGACCTTGGAGA...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp AAACTCATGCTCACATCCCTGGCTGGTTCTACAGGCCTTCCACCAGGACCTCTGTTCCACCAGGACCTCTaGAACCACTTCTTATCATGT +
Preference number: 4 (lower is better)
Translates to: KLMLTSLAGSTGLPPGPLFHQDL*NHFLSC
Trigger: ACATGATAAGAAGTGGTTCCAGAGGTCCTGGTGGAA...CAGAGGTCCTGGTGGAAGGCCTGTAGAACCAGCCAGGGATGTGAGCATGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCACTAAACATAACTAGCTaGCAAAGGTCTCGTATAAGT +
Preference number: 4 (lower is better)
Translates to: TAPWVVPAALDTDSKDPALNITS*QRSRIS
Trigger: ACTTATACGAGACCTTTGCCAGCTAGTTATGTTTAG...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGAAGCCGGGAGAACGATaGGCGCGAGCTTTGGGGACG +
Preference number: 4 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWKPGER*ARALGT
Trigger: CGTCCCCAAAGCTCGCGCCCATCGTTCTCCCGGCTT...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR CCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAAGGGGGCACCTTGGCTaGGGTCCGGCGGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPRGHLG*GPAGQP
Trigger: AGGCTGCCCCGCCGGACCCCAGCCAAGGTGCCCCCT...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR CCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCGTGCTGAAGGTGATGTaGGGGTACTGCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLVLKVM*GYCCTS
Trigger: GCTGGTGCAGCAGTACCCCCACATCACCTTCAGCAC...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GCGGCACTTTCTGAGCAAGTATCTGAACTGGACCTTTTCCAAGGGAAGCAGTCCTGGCTCCTTGGTCTGTaGTTTCTTTACACCATCCGA +
Preference number: 4 (lower is better)
Translates to: AALSEQVSELDLFQGKQSWLLGL*FLYTIR
Trigger: TCGGATGGTGTAAAGAAATCACAGACCAAGGAGCCA...GGACTGCTTCCCTTGGAAAAGGTCCAGTTCAGATACTTGCTCAGAAAGTGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp ACCAGGACCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTAACTGACTGGTCTTTCTaGGCCTCCATTTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TRTSGTTSYHVLGVASDVTDWSF*ASIFSP
Trigger: AGGGGAGAAAATGGAGGCTCAGAAAGACCAGTCAGT...TACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp AAACTCATGCTCACATCCCTGGCTGGTTCTACAGGCCTTCCACCAGGACCTCTGCTACTAAGATCCAGCTaGTTCCAAAACTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: KLMLTSLAGSTGLPPGPLLLRSS*FQNWKS
Trigger: AGACTTCCAGTTTTGGAAGCAGCTGGATCTTAGTAG...CAGAGGTCCTGGTGGAAGGCCTGTAGAACCAGCCAGGGATGTGAGCATGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTATCTCAGAGACTTGCTaGTCTGTGCAATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCISETC*SVQSGW
Trigger: CCACCCTGATTGCACAGAGCAGCAAGTCTCTGAGAT...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp TGGTTAGTGGAAAGATTTGTGGGAGACTCGCAAGCCCCGGATCTCAGTGCTGTTCCACTTCTTATCATGTaGTGGGAGTGGCATCTGATG +
Preference number: 4 (lower is better)
Translates to: WLVERFVGDSQAPDLSAVPLLIM*WEWHLM
Trigger: CATCAGATGCCACTCCCAGCACATGATAAGAAGTGG...AACAGCACTGAGATCCGGGGCTTGCGAGTCTCCCACAAATCTTTCCACTAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGTCGCCACATTCATGCTaGTGCTGGGCGGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWSPHSC*CWADKG
Trigger: CCCCTTGTCCGCCCAGCAGCAGCATGAATGTGGCGA...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGGCGTCGCCACATTCATaGTGCTGCTGGGCGGACAAG +
Preference number: 4 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWASPHS*CCWADK
Trigger: CTTGTCCGCCCAGCAGCAGCATGAATGTGGCGACGC...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTTCCAGTTCAGTGATATaGCGTAGGTCCAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCSSSVI*RRSKLE
Trigger: TTCCAGCTTGGACCTACGTCATATCACTGAACTGGA...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTAATTGGAAAATATCTTaGGCAGGATGGACGGCGGCA +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCNWKIS*AGWTAA
Trigger: TGCCGCCGTCCATCCTGCTCAAGATATTTTCCAATT...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp CCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTATGGGGAGGTTTTGTCCTTCCTTTaGAATGACCTCCACACACCT +
Preference number: 4 (lower is better)
Translates to: PLEPLLIMCWEWHLMYGEVLSFL*NDLHTP
Trigger: AGGTGTGTGGAGGTCATTGCAAAGGAAGGACAAAAC...CTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp ACCAGGACCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTAGGGACTACAGGTGTGTaGCATTATGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: TRTSGTTSYHVLGVASDVGTTGV*HYAWLI
Trigger: AATTAGCCAGGCATAATGGCACACACCTGTAGTCCC...TACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGGTCCTCTTGCAGTCCTaGAGGACGGTGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWVLLQS*RTVLKV
Trigger: CACCTTCAGCACCGTCCTGCAGGACTGCAAGAGGAC...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp CCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTATGGGGAGATCAGGGTGGCTCCTTaGTCTGTGATTTCTTTACAC +
Preference number: 4 (lower is better)
Translates to: PLEPLLIMCWEWHLMYGEIRVAP*SVISLH
Trigger: GTGTAAAGAAATCACAGACCAAGGAGCCACCCTGAT...CTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTGTGCTGAAGGTGATGTaGGGGTACTGCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISVLKVM*GYCCTS
Trigger: GCTGGTGCAGCAGTACCCCCACATCACCTTCAGCAC...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGCTACCTTAGTGGCCTaGAAGAAGGCTTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSAATLVA*KKASLS
Trigger: TGACAGAGAAGCCTTCTTCCAGGCCACTAAGGTAGC...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTTTAACTTTCGTGAGCTaGCCAGGAGAGTTCAGACTG +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCLTFVS*PGEFRL
Trigger: CAGTCTGAACTCTCCTGGCCAGCTCACGAAAGTTAA...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR CAA 72 bp TTCTGTGCAAGGCTTTACTTGTGCTTTGTGTGTGGTTaGGAACTGTCTTCCATCCTCACAGAGCCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: FCARLYLCFVCG*ELSSILTEPLV
Trigger: CACGAGAGGCTCTGTGAGGATGGAAGACAGTTCCAAACCACACACAAAGCACAAGTAAAGCCTTGCACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGATCATGCCTTCATCTaGGATCTTGTAACACTGGCC +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSADHAFI*DLVTLA
Trigger: GGCCAGTGTTACAAGATCTCAGATGAAGGCATGATC...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTTCCTTTAGAAGTGACTaGACAACCCATGAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCSFRSD*TTHEAY
Trigger: GTAGGCTTCATGGGTTGTTCAGTCACTTCTAAAGGA...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp ACCAGGACCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTACATTATCCAGTTCAGTaGTATGACGTAGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: TRTSGTTSYHVLGVASDVHYPVQ*YDVGPS
Trigger: GCTTGGACCTACGTCATATCACTGAACTGGATAATG...TACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCTCATCAGTGACCTGCTaGCGACTACTAAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLSSVTC*RLLRSS
Trigger: GCTGGATCTTAGTAGTCGTCAGCAGGTCACTGATGA...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp TCATTTGCCCCCACATTTGCTACATTTAGAAGATGCATGCCCTTTGAATGGCGTCCTTCTGCTGGAAGCTaGGGAGTTCTGCTGTCATTG +
Preference number: 4 (lower is better)
Translates to: SFAPTFATFRRCMPFEWRPSAGS*GVLLSL
Trigger: CAATGACAGCAGAACTCCTCAGCTTCCAGCAGAAGG...ACGCCATTCAAAGGGCATGCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAACGGCGGCAGCTGGTTaGTGTCTGGGGTTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPTAAAG*CLGFRG
Trigger: CCCCCGAAACCCCAGACATCAACCAGCTGCCGCCGT...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTCTCTGCTCTGCTGAATaGTCCCAGTGGACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISLCSAE*SQWTRR
Trigger: TCGCCTAGTCCACTGGGATCATTCAGCAGAGCAGAG...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTACACACACAGACAGGTaGCAGTTAAAACCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSTHTDR*QLKPFR
Trigger: TCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGT...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTACTCATGGCGCTTACTaGCTAGATTTTCCTAACCGA +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCTHGAY*LDFPNR
Trigger: TCGGTTAGGAAAATCTAGTCAGTAAGCGCCATGAGT...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAACTCATGCTCACATCCCTGGCTGGTTCTACAGGCCTTCCACCAGGACCTCTGATTTCTGAGAATGGCTaGGGACACATATGTATGAAT +
Preference number: 4 (lower is better)
Translates to: KLMLTSLAGSTGLPPGPLISENG*GHICMN
Trigger: ATTCATACATATGTGTCCGCAGCCATTCTCAGAAAT...CAGAGGTCCTGGTGGAAGGCCTGTAGAACCAGCCAGGGATGTGAGCATGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp CCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTATGGGGAGGCAAGGCTTTACTTGTaGTTTGTGTGTGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: PLEPLLIMCWEWHLMYGEARLYL*FVCGLE
Trigger: TTCCAAACCACACACAAAGCACAAGTAAAGCCTTGC...CTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp GCGGCACTTTCTGAGCAAGTATCTGAACTGGACCTTTTCCAAGGGAAGCAGTCCAAGCAGGCTTTTCTGTaGAAGGCTTTACTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: AALSEQVSELDLFQGKQSKQAFL*KALLVL
Trigger: AAGCACAAGTAAAGCCTTGCACAGAAAAGCCTGCTT...GGACTGCTTCCCTTGGAAAAGGTCCAGTTCAGATACTTGCTCAGAAAGTGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGACGTAGGTCCAAGCTaGAAAGGTTTCTTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSADVGPS*KGFLAW
Trigger: CCAAGCTAAGAAACCTTTCCAGCTTGGACCTACGTC...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTTGCTGTATCGCCCAATaGCTATCAGTGCATAATCTG +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCCCIAQ*LSVHNL
Trigger: CAGATTATGCACTGATAGCCATTGGGCGATACAGCA...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp TCATTTGCCCCCACATTTGCTACATTTAGAAGATGCATGCCCTTTGAATGGCGTCACATACCCCCTTACTaGCCCTTTGTTGGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: SFAPTFATFRRCMPFEWRHIPPY*PFVGPE
Trigger: TTCGGGACCAACAAAGGGCCAGTAAGGGGGTATGTG...ACGCCATTCAAAGGGCATGCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp TGGTTAGTGGAAAGATTTGTGGGAGACTCGCAAGCCCCGGATCTCAGTGCTGTTAAAGTAAGTCGCTTCTaGGCTGGGCTGAGAATATAT +
Preference number: 4 (lower is better)
Translates to: WLVERFVGDSQAPDLSAVKVSRF*AGLRIY
Trigger: ATATATTCTCAGCCCAGCCCAGAAGCGACTTACTTT...AACAGCACTGAGATCCGGGGCTTGCGAGTCTCCCACAAATCTTTCCACTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp GCGGCACTTTCTGAGCAAGTATCTGAACTGGACCTTTTCCAAGGGAAGCAGTCCCTTGTGCTTTGTGTGTaGTTTGGAACTGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: AALSEQVSELDLFQGKQSLVLCV*FGTVFH
Trigger: ATGGAAGACAGTTCCAAACCACACACAAAGCACAAG...GGACTGCTTCCCTTGGAAAAGGTCCAGTTCAGATACTTGCTCAGAAAGTGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGCACCAGATAGCAAGTTaGCCACCCGAGGATACACGG +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMHQIAS*PPEDTR
Trigger: CCGTGTATCCTCGGGTGGCCAACTTGCTATCTGGTG...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTATGAAGCCTACATATTaGAGCTCAGGACAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCMKPTY*SSGQCS
Trigger: TGAACACTGTCCTGAGCTTCAATATGTAGGCTTCAT...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTTCCTTTAGAAGTGACTaGACAACCCATGAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSSFRSD*TTHEAY
Trigger: GTAGGCTTCATGGGTTGTTCAGTCACTTCTAAAGGA...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTCTTAGCTTGGTTAGGTaGATGACTCCTTTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCLSLVR*MTPLEV
Trigger: CACTTCTAAAGGAGTCATTCACCTAACCAAGCTAAG...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp ACCAGGACCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTACACACCTGTCATTTATaGTCCAGTTCAGACAGAGAT +
Preference number: 4 (lower is better)
Translates to: TRTSGTTSYHVLGVASDVHTCHL*SSSDRD
Trigger: ATCTCTGTCTGAACTGGATCATAAATGACAGGTGTG...TACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCTGGCTCCTTGGTCTGTaGTTTCTTTACACCATCCGA +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLWLLGL*FLYTIR
Trigger: TCGGATGGTGTAAAGAAATCACAGACCAAGGAGCCA...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGTTTTGTCCTTCCTTTaGAATGACCTCCACACACCT +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSAVLSFL*NDLHTP
Trigger: AGGTGTGTGGAGGTCATTGCAAAGGAAGGACAAAAC...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTCTACTAAGATCCAGCTaGTTCCAAAACTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCLLRSS*FQNWKS
Trigger: AGACTTCCAGTTTTGGAAGCAGCTGGATCTTAGTAG...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp TCCTCACAGAGCCTCTCGTGTTTGGCTCTGAGCTGCTTTAAGTCTGAGGAAGCCCCCAATGGCTATCAGTaGATAATCTGTGATTTTACA +
Preference number: 4 (lower is better)
Translates to: SSQSLSCLALSCFKSEEAPNGYQ*IICDFT
Trigger: TGTAAAATCACAGATTATGCACTGATAGCCATTGGG...GGCTTCCTCAGACTTAAAGCAGCTCAGAGCCAAACACGAGAGGCTCTGTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTCAGTCTCTATTGTCATaGTGTATCGCCCAATGGCTA +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSQSLLS*CIAQWL
Trigger: TAGCCATTGGGCGATACAGCATGACAATAGAGACTG...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp GCGGCACTTTCTGAGCAAGTATCTGAACTGGACCTTTTCCAAGGGAAGCAGTCCTTTACGGTTAGACCCTaGAAATTGCAGTTTGTCATG +
Preference number: 4 (lower is better)
Translates to: AALSEQVSELDLFQGKQSFTVRP*KLQFVM
Trigger: CATGACAAACTGCAATTTGCAGGGTCTAACCGTAAA...GGACTGCTTCCCTTGGAAAAGGTCCAGTTCAGATACTTGCTCAGAAAGTGCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp ACCAGGACCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTACATTTAGAAGATGCATaGCCTTTGAATGGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: TRTSGTTSYHVLGVASDVHLEDA*PLNGVS
Trigger: AGACACGCCATTCAAAGGGCATGCATCTTCTAAATG...TACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCGACGTAGGTCCAAGCTaGAAAGGTTTCTTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLDVGPS*KGFLAW
Trigger: CCAAGCTAAGAAACCTTTCCAGCTTGGACCTACGTC...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp TCATTTGCCCCCACATTTGCTACATTTAGAAGATGCATGCCCTTTGAATGGCGTATCATGTGCTGGGAGTaGCATCTGATGTATGGGGAG +
Preference number: 4 (lower is better)
Translates to: SFAPTFATFRRCMPFEWRIMCWE*HLMYGE
Trigger: CTCCCCATACATCAGATGCCACTCCCAGCACATGAT...ACGCCATTCAAAGGGCATGCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp ACCAGGACCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTACTTCTTATCATGTGCTaGGAGTGGCATCTGATGTAT +
Preference number: 4 (lower is better)
Translates to: TRTSGTTSYHVLGVASDVLLIMC*EWHLMY
Trigger: ATACATCAGATGCCACTCCCAGCACATGATAAGAAG...TACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGGTCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AACATAACTAGCTGGCAAAGGTCTCGTATAAGTTGGGATTCTAAAGTGTTTGGAGCTCACATCCCTGGCTaGTTCTACAGGCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: NITSWQRSRISWDSKVFGAHIPG*FYRPST
Trigger: GGTGGAAGGCCTGTAGAACCAGCCAGGGATGTGAGC...TCCAAACACTTTAGAATCCCAACTTATACGAGACCTTTGCCAGCTAGTTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AGAGCTTTGGGCCATACTTCATTTGCCCCCACATTTGCTACATTTAGAAGATGCTTGTGCCAGCAGCACTaGATACAGACTCCAAAGACC +
Preference number: 4 (lower is better)
Translates to: RALGHTSFAPTFATFRRCLCQQH*IQTPKT
Trigger: GGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAA...GCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGAAGTATGGCCCAAAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AACATAACTAGCTGGCAAAGGTCTCGTATAAGTTGGGATTCTAAAGTGTTTGGACAGACGGCGTCGTGCTaGAGCCAATGGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: NITSWQRSRISWDSKVFGQTASC*SQWVLR
Trigger: TCTGAGAACCCATTGGCTCCAGCACGACGCCGTCTG...TCCAAACACTTTAGAATCCCAACTTATACGAGACCTTTGCCAGCTAGTTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CAA 72 bp CAAGCAGGCTTTTCTGTGCAAGGCTTTACTTGTGCTTaGTGTGTGGTTTGGAACTGTCTTCCATCCTCACAG +
Preference number: 4 (lower is better)
Translates to: QAGFSVQGFTCA*CVVWNCLPSSQ
Trigger: CTGTGAGGATGGAAGACAGTTCCAAACCACACACAAAGCACAAGTAAAGCCTTGCACAGAAAAGCCTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp GCGGCACTTTCTGAGCAAGTATCTGAACTGGACCTTTTCCAAGGGAAGCAGTCCCGAAATGAATATCTTTaGGTTCTCTGCATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: AALSEQVSELDLFQGKQSRNEYL*VLCILS
Trigger: GCTCAAAATGCAGAGAACTCAAAGATATTCATTTCG...GGACTGCTTCCCTTGGAAAAGGTCCAGTTCAGATACTTGCTCAGAAAGTGCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCCATTATCCAGTTCAGTaGTATGACGTAGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLHYPVQ*YDVGPS
Trigger: GCTTGGACCTACGTCATATCACTGAACTGGATAATG...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGGTACTTGCAAACCAATaGTGCGGAAAGGCAACGCTC +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMVLANQ*CGKATL
Trigger: GAGCGTTGCCTTTCCGCATCATTGGTTTGCAAGTAC...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGTCATCAGTGACCTGCTaGCGACTACTAAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMSSVTC*RLLRSS
Trigger: GCTGGATCTTAGTAGTCGTCAGCAGGTCACTGATGA...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCCCACCGTCACTTCGTTaGCTTTATCACATCTCATCA +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLPPSLR*LYHISS
Trigger: TGATGAGATGTGATAAAGTCAACGAAGTGACGGTGG...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTCTACTAAGATCCAGCTaGTTCCAAAACTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSALLRSS*FQNWKS
Trigger: AGACTTCCAGTTTTGGAAGCAGCTGGATCTTAGTAG...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCCAGTCTCTATTGTCATaGTGTATCGCCCAATGGCTA +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLQSLLS*CIAQWL
Trigger: TAGCCATTGGGCGATACAGCATGACAATAGAGACTG...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGATCTCAGAGACTTGCTaGTCTGTGCAATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMISETC*SVQSGW
Trigger: CCACCCTGATTGCACAGAGCAGCAAGTCTCTGAGAT...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAGGGGGCTACATGCTTTaGCCAGGGAAGCCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPGGYML*PGKPGE
Trigger: TTCTCCCGGCTTCCCTGGGCAAAGCATGTAGCCCCC...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR CCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCTCAGTGAGTTTGTCCTaGTTGCCTACATGCACTTTC +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLSVSLS*LPTCTF
Trigger: GAAAGTGCATGTAGGCAACCAGGACAAACTCACTGA...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp GCGGCACTTTCTGAGCAAGTATCTGAACTGGACCTTTTCCAAGGGAAGCAGTCCAGGTCTCGTATAAGTTaGGATTCTAAAGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: AALSEQVSELDLFQGKQSRSRIS*DSKVFG
Trigger: TCCAAACACTTTAGAATCCCAACTTATACGAGACCT...GGACTGCTTCCCTTGGAAAAGGTCCAGTTCAGATACTTGCTCAGAAAGTGCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp CATTCTCCTGTAGTAACTGTAACATACAACTTCTACAGTGTATCTCCGAAGATGTCGTGCTGGAGCCAATaGGTTCTCAGAGTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: HSPVVTVTYNFYSVSPKMSCWSQ*VLRVAL
Trigger: GAGAGCCACTCTGAGAACCCATTGGCTCCAGCACGA...CATCTTCGGAGATACACTGTAGAAGTTGTATGTTACAGTTACTACAGGAGAATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTAAAAGCCAGCTCACTTaGGAACAAATGACAACTGCA +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSAKSQLT*EQMTTA
Trigger: TGCAGTTGTCATTTGTTCCCAAGTGAGCTGGCTTTT...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTAGTAGATCAGAGCCCTaGTGTAGATGTGCACACGTG +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISSRSEP*CRCAHV
Trigger: CACGTGTGCACATCTACACCAGGGCTCTGATCTACT...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGAGTAGATCAGAGCCCTaGTGTAGATGTGCACACGTG +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMSRSEP*CRCAHV
Trigger: CACGTGTGCACATCTACACCAGGGCTCTGATCTACT...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCATGAAGCCTACATATTaGAGCTCAGGACAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLMKPTY*SSGQCS
Trigger: TGAACACTGTCCTGAGCTTCAATATGTAGGCTTCAT...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGTCCAGTTCAGTGATATaGCGTAGGTCCAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMSSSVI*RRSKLE
Trigger: TTCCAGCTTGGACCTACGTCATATCACTGAACTGGA...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTTGGCTCCTTGGTCTGTaGTTTCTTTACACCATCCGA +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISWLLGL*FLYTIR
Trigger: TCGGATGGTGTAAAGAAATCACAGACCAAGGAGCCA...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTTCACTTGGGAACAAATaGCAACTGCACTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSSLGNK*QLHFWY
Trigger: ATACCAAAAGTGCAGTTGTCATTTGTTCCCAAGTGA...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTCATTCTGAAACCATTTaGCAACCAAACTGTAACACT +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCHSETI*QPNCNT
Trigger: AGTGTTACAGTTTGGTTGTCAAATGGTTTCAGAATG...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGGGTCACGCCAGTACTTaGAAACCAATGATGCGGAAA +
Preference number: 4 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWGHAST*KPMMRK
Trigger: TTTCCGCATCATTGGTTTGCAAGTACTGGCGTGACC...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAATGTGGGGGTACTGCTaGACCAGCTGTTCCACCGTC +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPMWGYC*TSCSTV
Trigger: GACGGTGGAACAGCTGGTGCAGCAGTACCCCCACAT...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTCCACAGTGGATAACATaGTACCTTAGTGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISPQWIT*YLSGLE
Trigger: TTCCAGGCCACTAAGGTAGCATGTTATCCACTGTGG...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp TCATTTGCCCCCACATTTGCTACATTTAGAAGATGCATGCCCTTTGAATGGCGTTGCTGTATCGCCCAATaGCTATCAGTGCATAATCTG +
Preference number: 4 (lower is better)
Translates to: SFAPTFATFRRCMPFEWRCCIAQ*LSVHNL
Trigger: CAGATTATGCACTGATAGCCATTGGGCGATACAGCA...ACGCCATTCAAAGGGCATGCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAATGGACGGCGGCAGCTaGTTGATGTCTGGGGTTTCG +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPMDGGS*LMSGVS
Trigger: CGAAACCCCAGACATCAACCAGCTGCCGCCGTCCAT...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCTTGGACATCTCCAAGTaGCAGCAATTAGAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLLDISK*QQLEAQ
Trigger: TTGAGCTTCTAATTGCTGCCACTTGGAGATGTCCAA...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTTGGGAAGAATACTCATaGCGCTTACTGACTAGATTT +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSWEEYS*RLLTRF
Trigger: AAATCTAGTCAGTAAGCGCCATGAGTATTCTTCCCA...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTTGGGAAGAATACTCATaGCGCTTACTGACTAGATTT +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSAWEEYS*RLLTRF
Trigger: AAATCTAGTCAGTAAGCGCCATGAGTATTCTTCCCA...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR CAA 72 bp TCACAAAGGACACAAGAGCTTTGGGCCATACTTCATTaGCCCCCACATTTGCTACATTTAGAAGATGCATGC +
Preference number: 4 (lower is better)
Translates to: SQRTQELWAILH*PPHLLHLEDAC
Trigger: GCATGCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGAAGTATGGCCCAAAGCTCTTGTGTCCTTTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CAA 72 bp AAACCAACAAGCAGGCTTTTCTGTGCAAGGCTTTACTaGTGCTTTGTGTGTGGTTTGGAACTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: KPTSRLFCARLY*CFVCGLELSSI
Trigger: GATGGAAGACAGTTCCAAACCACACACAAAGCACAAGTAAAGCCTTGCACAGAAAAGCCTGCTTGTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTCGAAATGAATATCTTTaGGTTCTCTGCATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSRNEYL*VLCILS
Trigger: GCTCAAAATGCAGAGAACTCAAAGATATTCATTTCG...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGCATTATCCAGTTCAGTaGTATGACGTAGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWHYPVQ*YDVGPS
Trigger: GCTTGGACCTACGTCATATCACTGAACTGGATAATG...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTTCAGTGCATAATCTGTaGTTTTACAGGACACCAAAT +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSSVHNL*FYRTPN
Trigger: ATTTGGTGTCCTGTAAAATCACAGATTATGCACTGA...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGCCACCGTCACTTCGTTaGCTTTATCACATCTCATCA +
Preference number: 4 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWPPSLR*LYHISS
Trigger: TGATGAGATGTGATAAAGTCAACGAAGTGACGGTGG...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTAATCTTCTATTAATGTaGCTACCCTCTCGTATCTCA +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSANLLLM*LPSRIS
Trigger: TGAGATACGAGAGGGTAGTCACATTAATAGAAGATT...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTTTGAGATTAATGCTTTaGGGCTGGATATGGTATTTC +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSALRLML*GWIWYF
Trigger: GAAATACCATATCCAGCCTCAAAGCATTAATCTCAA...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTAAACTACAAACCGGGTaGATTTTCTTTATCCACTCA +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSAKLQTG*IFFIHS
Trigger: TGAGTGGATAAAGAAAATTCACCCGGTTTGTAGTTT...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGGTTTTGTCCTTCCTTTaGAATGACCTCCACACACCT +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMVLSFL*NDLHTP
Trigger: AGGTGTGTGGAGGTCATTGCAAAGGAAGGACAAAAC...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTCCCAATGGCTATCAGTaGATAATCTGTGATTTTACA +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSAPNGYQ*IICDFT
Trigger: TGTAAAATCACAGATTATGCACTGATAGCCATTGGG...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGAATATCTCAGAGACTTaGTGCTCTGTGCAATCAGGG +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMNISET*CSVQSG
Trigger: CCCTGATTGCACAGAGCAGCAAGTCTCTGAGATATT...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp GTTGGTCCCGAATGGCCAGAATACATAGATGTTCAGTACCAAAATTACACACTTAGCCCCGGATCTCAGTaGTGTTGCTTAGTTACAAAG +
Preference number: 4 (lower is better)
Translates to: VGPEWPEYIDVQYQNYTLSPGSQ*CCLVTK
Trigger: CTTTGTAACTAAGCAACAGCACTGAGATCCGGGGCT...AAGTGTGTAATTTTGGTACTGAACATCTATGTATTCTGGCCATTCGGGACCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp AACATAACTAGCTGGCAAAGGTCTCGTATAAGTTGGGATTCTAAAGTGTTTGGATGTGGCAGTTCCTTCTaGTGGAAGCTGAGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: NITSWQRSRISWDSKVFGCGSSF*WKLRSS
Trigger: AGAACTCCTCAGCTTCCAGCAGAAGGAACTGCCACA...TCCAAACACTTTAGAATCCCAACTTATACGAGACCTTTGCCAGCTAGTTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTGGAACAAATGACAACTaGACTTTTGGTATGCAGTAT +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSGTNDN*TFGMQY
Trigger: ATACTGCATACCAAAAGTGCAGTTGTCATTTGTTCC...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGTGCTGTATCGCCCAATaGCTATCAGTGCATAATCTG +
Preference number: 4 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWCCIAQ*LSVHNL
Trigger: CAGATTATGCACTGATAGCCATTGGGCGATACAGCA...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGATCAGGGTGGCTCCTTaGTCTGTGATTTCTTTACAC +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMIRVAP*SVISLH
Trigger: GTGTAAAGAAATCACAGACCAAGGAGCCACCCTGAT...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTAATAAGATATTTCAGTaGTGGGGAAGTGGATATGAA +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCNKIFQ*WGSGYE
Trigger: TTCATATCCACTTCCCCACCACTGAAATATCTTATT...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTCATCTATATCATAGATaGCTCTCCCTTCTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSHLYHR*LSLLLS
Trigger: AGACAAAAGAAGGGAGAGCCATCTATGATATAGATG...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTTTGCATCAGGCTTTCTaGATTAGTCAACATTTTAGA +
Preference number: 4 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCLHQAF*ISQHFR
Trigger: TCTAAAATGTTGACTAATCCAGAAAGCCTGATGCAA...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp CATTCTCCTGTAGTAACTGTAACATACAACTTCTACAGTGTATCTCCGAAGATGGATCATGCCTTCATCTaGGATCTTGTAACACTGGCC +
Preference number: 4 (lower is better)
Translates to: HSPVVTVTYNFYSVSPKMDHAFI*DLVTLA
Trigger: GGCCAGTGTTACAAGATCTCAGATGAAGGCATGATC...CATCTTCGGAGATACACTGTAGAAGTTGTATGTTACAGTTACTACAGGAGAATG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTCACACCTGTCATTTATaGTCCAGTTCAGACAGAGAT +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISHTCHL*SSSDRD
Trigger: ATCTCTGTCTGAACTGGATCATAAATGACAGGTGTG...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTTTTTCCAGATTATGTTaGATCAGGCTTTCTGGATTA +
Preference number: 4 (lower is better)
Translates to: EISSPNVQFSSALLNDPSFSRLC*IRLSGL
Trigger: TAATCCAGAAAGCCTGATGCAACATAATCTGGAAAA...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCGAGAATAAAAAGCCCTaGATTAAACGTGTTCACATG +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLENKKP*IKRVHM
Trigger: CATGTGAACACGTTTAATGCAGGGCTTTTTATTCTC...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp GTTGGTCCCGAATGGCCAGAATACATAGATGTTCAGTACCAAAATTACACACTTTCAGTGAGTTTGTCCTaGTTGCCTACATGCACTTTC +
Preference number: 4 (lower is better)
Translates to: VGPEWPEYIDVQYQNYTLSVSLS*LPTCTF
Trigger: GAAAGTGCATGTAGGCAACCAGGACAAACTCACTGA...AAGTGTGTAATTTTGGTACTGAACATCTATGTATTCTGGCCATTCGGGACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AGAGCTTTGGGCCATACTTCATTTGCCCCCACATTTGCTACATTTAGAAGATGCCACCTTTACTGTTGCTaGAAACTTGAAACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: RALGHTSFAPTFATFRRCHLYCC*KLETQN
Trigger: ATTCTGGGTTTCAAGTTTCCAGCAACAGTAAAGGTG...GCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGAAGTATGGCCCAAAGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp CATTCTCCTGTAGTAACTGTAACATACAACTTCTACAGTGTATCTCCGAAGATGAGAAGAAAACACCTGTaGAGTGCCTGGTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: HSPVVTVTYNFYSVSPKMRRKHL*SAWCPV
Trigger: TACTGGACACCAGGCACTCCACAGGTGTTTTCTTCT...CATCTTCGGAGATACACTGTAGAAGTTGTATGTTACAGTTACTACAGGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGAAAAGCCAGCTCACTTaGGAACAAATGACAACTGCA +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMKSQLT*EQMTTA
Trigger: TGCAGTTGTCATTTGTTCCCAAGTGAGCTGGCTTTT...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTTTGCATCAGGCTTTCTaGATTAGTCAACATTTTAGA +
Preference number: 4 (lower is better)
Translates to: KTLPRDQLPKCTILLCSALHQAF*ISQHFR
Trigger: TCTAAAATGTTGACTAATCCAGAAAGCCTGATGCAA...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR CAA 72 bp CTGAACCTGAACTCTGGCTCTCCGCAGACCATACCGTaGCTACTAATTTCTTTTCTTTGTTACTCATATCTT +
Preference number: 4 (lower is better)
Translates to: LNLNSGSPQTIP*LLISFLCYSYL
Trigger: AAGATATGAGTAACAAAGAAAAGAAATTAGTAGCAACGGTATGGTCTGCGGAGAGCCAGAGTTCAGGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
3UTR CAA 72 bp AGCCAGCTCACTTGGGAACAAATGACAACTGCACTTTaGGTATGCAGTATGCAAACAAGACACAAATACACA +
Preference number: 4 (lower is better)
Translates to: SQLTWEQMTTAL*VCSMQTRHKYT
Trigger: TGTGTATTTGTGTCTTGTTTGCATACTGCATACCAAAAGTGCAGTTGTCATTTGTTCCCAAGTGAGCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
3UTR CAA 72 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTaGGACATCTCCAAGTGGCAGCAATTAGAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: HNSSHVKRRPSY*DISKWQQLEAQ
Trigger: TTGAGCTTCTAATTGCTGCCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GTTGGTCCCGAATGGCCAGAATACATAGATGTTCAGTACCAAAATTACACACTTATGAAGCCTACATATTaGAGCTCAGGACAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: VGPEWPEYIDVQYQNYTLMKPTY*SSGQCS
Trigger: TGAACACTGTCCTGAGCTTCAATATGTAGGCTTCAT...AAGTGTGTAATTTTGGTACTGAACATCTATGTATTCTGGCCATTCGGGACCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp GTTGGTCCCGAATGGCCAGAATACATAGATGTTCAGTACCAAAATTACACACTTCTTAGCTTGGTTAGGTaGATGACTCCTTTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: VGPEWPEYIDVQYQNYTLLSLVR*MTPLEV
Trigger: CACTTCTAAAGGAGTCATTCACCTAACCAAGCTAAG...AAGTGTGTAATTTTGGTACTGAACATCTATGTATTCTGGCCATTCGGGACCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTGATTTTTGCACCTCTTaGCAATTTCCATCACGGTTT +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISDFCTS*QFPSRF
Trigger: AAACCGTGATGGAAATTGTCAAGAGGTGCAAAAATC...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGGATTTTTGCACCTCTTaGCAATTTCCATCACGGTTT +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMDFCTS*QFPSRF
Trigger: AAACCGTGATGGAAATTGTCAAGAGGTGCAAAAATC...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAGTACTTGCAAACCAATaGTGCGGAAAGGCAACGCTC +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPVLANQ*CGKATL
Trigger: GAGCGTTGCCTTTCCGCATCATTGGTTTGCAAGTAC...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGATCTTTGCAGTAGCATaGGAACTAGTCCAAAATGAC +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMIFAVA*ELVQND
Trigger: GTCATTTTGGACTAGTTCTCATGCTACTGCAAAGAT...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp CATTCTCCTGTAGTAACTGTAACATACAACTTCTACAGTGTATCTCCGAAGATGAATATCTCAGAGACTTaGTGCTCTGTGCAATCAGGG +
Preference number: 4 (lower is better)
Translates to: HSPVVTVTYNFYSVSPKMNISET*CSVQSG
Trigger: CCCTGATTGCACAGAGCAGCAAGTCTCTGAGATATT...CATCTTCGGAGATACACTGTAGAAGTTGTATGTTACAGTTACTACAGGAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCTTTTCCAGATTATGTTaGATCAGGCTTTCTGGATTA +
Preference number: 4 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLFSRLC*IRLSGL
Trigger: TAATCCAGAAAGCCTGATGCAACATAATCTGGAAAA...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTAGCTGCTTCCAAAACTaGAAGTCTAAACAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISSCFQN*KSKQRS
Trigger: TGACCTTTGTTTAGACTTCCAGTTTTGGAAGCAGCT...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp CATTCTCCTGTAGTAACTGTAACATACAACTTCTACAGTGTATCTCCGAAGATGGCAGCGGCATTAGGTTaGTTAGTGGAAAGATTTGTG +
Preference number: 4 (lower is better)
Translates to: HSPVVTVTYNFYSVSPKMAAALG*LVERFV
Trigger: CACAAATCTTTCCACTAACCAACCTAATGCCGCTGC...CATCTTCGGAGATACACTGTAGAAGTTGTATGTTACAGTTACTACAGGAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAGCTACCTTAGTGGCCTaGAAGAAGGCTTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPATLVA*KKASLS
Trigger: TGACAGAGAAGCCTTCTTCCAGGCCACTAAGGTAGC...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTCGAAATGAATATCTTTaGGTTCTCTGCATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISRNEYL*VLCILS
Trigger: GCTCAAAATGCAGAGAACTCAAAGATATTCATTTCG...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGTCAGTGCATAATCTGTaGTTTTACAGGACACCAAAT +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMSVHNL*FYRTPN
Trigger: ATTTGGTGTCCTGTAAAATCACAGATTATGCACTGA...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAAATTGGAAAATATCTTaGGCAGGATGGACGGCGGCA +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPNWKIS*AGWTAA
Trigger: TGCCGCCGTCCATCCTGCTCAAGATATTTTCCAATT...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTAATCTTCTATTAATGTaGCTACCCTCTCGTATCTCA +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISNLLLM*LPSRIS
Trigger: TGAGATACGAGAGGGTAGTCACATTAATAGAAGATT...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTCATTCTGAAACCATTTaGCAACCAAACTGTAACACT +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISHSETI*QPNCNT
Trigger: AGTGTTACAGTTTGGTTGTCAAATGGTTTCAGAATG...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGAAACTACAAACCGGGTaGATTTTCTTTATCCACTCA +
Preference number: 4 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWKLQTG*IFFIHS
Trigger: TGAGTGGATAAAGAAAATTCACCCGGTTTGTAGTTT...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGCCCAATGGCTATCAGTaGATAATCTGTGATTTTACA +
Preference number: 4 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWPNGYQ*IICDFT
Trigger: TGTAAAATCACAGATTATGCACTGATAGCCATTGGG...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGGGAACAAATGACAACTaGACTTTTGGTATGCAGTAT +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMGTNDN*TFGMQY
Trigger: ATACTGCATACCAAAAGTGCAGTTGTCATTTGTTCC...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCACCACAGTGGATAACATaGTACCTTAGTGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPPQWIT*YLSGLE
Trigger: TTCCAGGCCACTAAGGTAGCATGTTATCCACTGTGG...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTGAGAATAAAAAGCCCTaGATTAAACGTGTTCACATG +
Preference number: 4 (lower is better)
Translates to: ESVSACTYNITSAVVIISENKKP*IKRVHM
Trigger: CATGTGAACACGTTTAATGCAGGGCTTTTTATTCTC...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGTTGTTTCTCTTTTATTaGAACCCACTGCAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMLFLFY*NPLQGQ
Trigger: TTGACCTTGCAGTGGGTTGCAATAAAAGAGAAACAA...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR CCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCATTAACTTTCGTGAGCTaGCCAGGAGAGTTCAGACTG +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPLTFVS*PGEFRL
Trigger: CAGTCTGAACTCTCCTGGCCAGCTCACGAAAGTTAA...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGCATCTATATCATAGATaGCTCTCCCTTCTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWHLYHR*LSLLLS
Trigger: AGACAAAAGAAGGGAGAGCCATCTATGATATAGATG...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AACATAACTAGCTGGCAAAGGTCTCGTATAAGTTGGGATTCTAAAGTGTTTGGAGATTTTTGCACCTCTTaGCAATTTCCATCACGGTTT +
Preference number: 4 (lower is better)
Translates to: NITSWQRSRISWDSKVFGDFCTS*QFPSRF
Trigger: AAACCGTGATGGAAATTGTCAAGAGGTGCAAAAATC...TCCAAACACTTTAGAATCCCAACTTATACGAGACCTTTGCCAGCTAGTTATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp TGCATGCCCTTTGAATGGCGTGTCTATTTAGTTTCACATTATTTTGCTAGATTTGAGTTCTGCTGTCATTaGTTCCTGTTTCTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: CMPFEWRVYLVSHYFARFEFCCH*FLFLED
Trigger: GTCCTCTAGAAACAGGAATCAATGACAGCAGAACTC...AAATCTAGCAAAATAATGTGAAACTAAATAGACACGCCATTCAAAGGGCATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp AACATAACTAGCTGGCAAAGGTCTCGTATAAGTTGGGATTCTAAAGTGTTTGGAAAATATGACAATTTCTaGGAATGGCTGCGGACACAT +
Preference number: 4 (lower is better)
Translates to: NITSWQRSRISWDSKVFGKYDNF*EWLRTH
Trigger: ATGTGTCCGCAGCCATTCTCAGAAATTGTCATATTT...TCCAAACACTTTAGAATCCCAACTTATACGAGACCTTTGCCAGCTAGTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR GCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAAATATCTCAGAGACTTaGTGCTCTGTGCAATCAGGG +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPNISET*CSVQSG
Trigger: CCCTGATTGCACAGAGCAGCAAGTCTCTGAGATATT...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp TGCATGCCCTTTGAATGGCGTGTCTATTTAGTTTCACATTATTTTGCTAGATTTCATTTCCTAAACTCATaGTCACATCCCTGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: CMPFEWRVYLVSHYFARFHFLNS*SHPWLV
Trigger: AACCAGCCAGGGATGTGAGCATGAGTTTAGGAAATG...AAATCTAGCAAAATAATGTGAAACTAAATAGACACGCCATTCAAAGGGCATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCATCAGTGAGTTTGTCCTaGTTGCCTACATGCACTTTC +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPSVSLS*LPTCTF
Trigger: GAAAGTGCATGTAGGCAACCAGGACAAACTCACTGA...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAATCAGGGTGGCTCCTTaGTCTGTGATTTCTTTACAC +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPIRVAP*SVISLH
Trigger: GTGTAAAGAAATCACAGACCAAGGAGCCACCCTGAT...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CCA 90 bp TGCATGCCCTTTGAATGGCGTGTCTATTTAGTTTCACATTATTTTGCTAGATTTCTCAGAGTGGCTCTCTaGTTAGAGAAAGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: CMPFEWRVYLVSHYFARFLRVAL*LEKGFR
Trigger: TCTGAATCCTTTCTCTAACCAGAGAGCCACTCTGAG...AAATCTAGCAAAATAATGTGAAACTAAATAGACACGCCATTCAAAGGGCATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR TCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCACTTAGCTTGGTTAGGTaGATGACTCCTTTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPLSLVR*MTPLEV
Trigger: CACTTCTAAAGGAGTCATTCACCTAACCAAGCTAAG...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp CATTCTCCTGTAGTAACTGTAACATACAACTTCTACAGTGTATCTCCGAAGATGTCAGTGCATAATCTGTaGTTTTACAGGACACCAAAT +
Preference number: 4 (lower is better)
Translates to: HSPVVTVTYNFYSVSPKMSVHNL*FYRTPN
Trigger: ATTTGGTGTCCTGTAAAATCACAGATTATGCACTGA...CATCTTCGGAGATACACTGTAGAAGTTGTATGTTACAGTTACTACAGGAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCATTGGACATCTCCAAGTaGCAGCAATTAGAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPLDISK*QQLEAQ
Trigger: TTGAGCTTCTAATTGCTGCCACTTGGAGATGTCCAA...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR TCA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCACTTAAAAAGGCTCCCTaGTGTCCTCATTATAAATCT +
Preference number: 4 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPLKKAP*CPHYKS
Trigger: AGATTTATAATGAGGACATCAGGGAGCCTTTTTAAG...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR GCA 90 bp TGCATGCCCTTTGAATGGCGTGTCTATTTAGTTTCACATTATTTTGCTAGATTTTTAGACCCTGCAAATTaGAGTTTGTCATGTAATCTT +
Preference number: 4 (lower is better)
Translates to: CMPFEWRVYLVSHYFARFLDPAN*SLSCNL
Trigger: AAGATTACATGACAAACTGCAATTTGCAGGGTCTAA...AAATCTAGCAAAATAATGTGAAACTAAATAGACACGCCATTCAAAGGGCATGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CCA 90 bp TGCATGCCCTTTGAATGGCGTGTCTATTTAGTTTCACATTATTTTGCTAGATTTAAATCTGGAGATGGATaGCATGATACAAAATCTGAA +
Preference number: 4 (lower is better)
Translates to: CMPFEWRVYLVSHYFARFKSGDG*HDTKSE
Trigger: TTCAGATTTTGTATCATGCCATCCATCTCCAGATTT...AAATCTAGCAAAATAATGTGAAACTAAATAGACACGCCATTCAAAGGGCATGCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS GCA 90 bp CGTCAGCTGCGGGCCGCCGGAGTGCCCGACGGGGGCTACATGCTTTaGCCAGGGAAGCCGGGAGAACGATGGGCGCGAGCTTTGGGGACG +
Preference number: 5 (lower is better)
Translates to: RQLRAAGVPDGGYML*PGKPGERWARALGT
Trigger: CGTCCCCAAAGCTCGCGCCCATCGTTCTCCCGGCTTCCCTGGGCAAAGCATGTAGCCCCCGTCGGGCACTCCGGCGGCCCGCAGCTGACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS GCA 90 bp AAGCGCACCGGCCCCAAGCTGGCCAGGAAGAGACTTCGGCCCTGCTaGTCCCAGGCGGCGGCCGCAGCCAGCCCCAACTCTTTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: KRTGPKLARKRLRPC*SQAAAAASPNSLQQ
Trigger: CTGCTGCAAAGAGTTGGGGCTGGCTGCGGCCGCCGCCTGGGAGCAGCAGGGCCGAAGTCTCTTCCTGGCCAGCTTGGGGCCGGTGCGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS GCA 90 bp AGGAAGCGCACCGGCCCCAAGCTGGCCAGGAAGAGACTTCGGCCCTaGTGCTCCCAGGCGGCGGCCGCAGCCAGCCCCAACTCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: RKRTGPKLARKRLRP*CSQAAAAASPNSLQ
Trigger: CTGCAAAGAGTTGGGGCTGGCTGCGGCCGCCGCCTGGGAGCAGCAGGGCCGAAGTCTCTTCCTGGCCAGCTTGGGGCCGGTGCGCTTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR CAA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATAAGACTGCCCCCTGGGTaGTGCCAGCAGCACTGGATA +
Preference number: 5 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWIRLPPG*CQQHWI
Trigger: TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCT...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTGGGCAGAGCGGCTGCTaGCAGGGGGTGCAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: EISSPNVQFSSALLNDPSGQSGC*QGVQAG
Trigger: CCCCGCCTGCACCCCCTGCAAGCAGCCGCTCTGCCC...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619412.4
CDS-3UTR CAA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACCTTCATCAGTGAGTTaGTCCTGGTTGCCTACATGC +
Preference number: 5 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWIPSSVS*SWLPTC
Trigger: GCATGTAGGCAACCAGGACAAACTCACTGATGAAGG...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACATCCACAGTCTCTATaGTCATGCTGTATCGCCCAA +
Preference number: 5 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWIHPQSL*SCCIAQ
Trigger: TTGGGCGATACAGCATGACAATAGAGACTGTGGATG...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS TCA 90 bp AGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATaGTCCCAGTGGACTAGGCGAGGCAGGAGCGCTAGGAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: RDQLPKCTILLCSAE*SQWTRRGRSARRRR
Trigger: CCGCCTCCTCCTAGCGCTCCTGCCTCGCCTAGTCCACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTGACGGCGGCAGCTGGTaGATGTCTGGGGTTTCGGGG +
Preference number: 5 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCDGGSW*MSGVSG
Trigger: CCCCGAAACCCCAGACATCAACCAGCTGCCGCCGTC...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTGCCAGCCCCAACTCTTaGCAGCAGGAGGCGGGCGAC +
Preference number: 5 (lower is better)
Translates to: EISSPNVQFSSALLNDPSASPNS*QQEAGD
Trigger: GTCGCCCGCCTCCTGCTGCAAAGAGTTGGGGCTGGC...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR CAA 90 bp TGGTTAGTGGAAAGATTTGTGGGAGACTCGCAAGCCCCGGATCTCAGTGCTGTTCCCCTTACTGGCCCTTaGTTGGTCCCGAATGGCCAG +
Preference number: 5 (lower is better)
Translates to: WLVERFVGDSQAPDLSAVPLTGP*LVPNGQ
Trigger: CTGGCCATTCGGGACCAACAAAGGGCCAGTAAGGGG...AACAGCACTGAGATCCGGGGCTTGCGAGTCTCCCACAAATCTTTCCACTAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp CCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTATGGGGAGTGCAACCTCGGCCTCTaGAGCTCAGGTGATCCTCCC +
Preference number: 5 (lower is better)
Translates to: PLEPLLIMCWEWHLMYGECNLGL*SSGDPP
Trigger: GGGAGGATCACCTGAGCTCAAGAGGCCGAGGTTGCA...CTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS GCA 90 bp TTGCAGTCCTGCAGGACGGTGCTGAAGGTGATGTGGGGGTACTGCTaGACCAGCTGTTCCACCGTCACTTCGTTGACTTTATCACATCTC +
Preference number: 5 (lower is better)
Translates to: LQSCRTVLKVMWGYC*TSCSTVTSLTLSHL
Trigger: GAGATGTGATAAAGTCAACGAAGTGACGGTGGAACAGCTGGTGCAGCAGTACCCCCACATCACCTTCAGCACCGTCCTGCAGGACTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS GCA 90 bp CTCTTGCAGTCCTGCAGGACGGTGCTGAAGGTGATGTGGGGGTACTaGTGCACCAGCTGTTCCACCGTCACTTCGTTGACTTTATCACAT +
Preference number: 5 (lower is better)
Translates to: LLQSCRTVLKVMWGY*CTSCSTVTSLTLSH
Trigger: ATGTGATAAAGTCAACGAAGTGACGGTGGAACAGCTGGTGCAGCAGTACCCCCACATCACCTTCAGCACCGTCCTGCAGGACTGCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp ACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATACAGACTCCAAAGACCCGGCAGGCTTTACTTGTGCTTaGTGTGTGGTTTGGAACTGT +
Preference number: 5 (lower is better)
Translates to: TAPWVVPAALDTDSKDPAGFTCA*CVVWNC
Trigger: ACAGTTCCAAACCACACACAAAGCACAAGTAAAGCC...TGCCGGGTCTTTGGAGTCTGTATCCAGTGCTGCTGGCACAACCCAGGGGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTCGATGGGCGCGAGCTTaGGGGACGCGAGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: ESVSACTYNITSAVVIISRWARA*GTRGRE
Trigger: CTCCCTCCCTCGCGTCCCCAAAGCTCGCGCCCATCG...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR CAA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTCTCTCCAAGGTCCTCTaGCAGTCCTGCAGGACGGTG +
Preference number: 5 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCLSKVL*QSCRTV
Trigger: CACCGTCCTGCAGGACTGCAAGAGGACCTTGGAGAG...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp AGCAGTCCCCGTGGCCACAGACTGCCCCCTGGGTTGTGCCAGCAGCACTGGATAACTGTTGCTGGAAACTaGAAACCCAGAATACAATTT +
Preference number: 5 (lower is better)
Translates to: SSPRGHRLPPGLCQQHWITVAGN*KPRIQF
Trigger: AAATTGTATTCTGGGTTTCAAGTTTCCAGCAACAGT...TATCCAGTGCTGCTGGCACAACCCAGGGGGCAGTCTGTGGCCACGGGGACTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTCTCTCCAAGGTCCTCTaGCAGTCCTGCAGGACGGTG +
Preference number: 5 (lower is better)
Translates to: KTLPRDQLPKCTILLCSALSKVL*QSCRTV
Trigger: CACCGTCCTGCAGGACTGCAAGAGGACCTTGGAGAG...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp TGGTTAGTGGAAAGATTTGTGGGAGACTCGCAAGCCCCGGATCTCAGTGCTGTTCTTACTGGCCCTTTGTaGGTCCCGAATGGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: WLVERFVGDSQAPDLSAVLTGPL*VPNGQN
Trigger: ATTCTGGCCATTCGGGACCAACAAAGGGCCAGTAAG...AACAGCACTGAGATCCGGGGCTTGCGAGTCTCCCACAAATCTTTCCACTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGGACGGCGGCAGCTGGTaGATGTCTGGGGTTTCGGGG +
Preference number: 5 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMDGGSW*MSGVSG
Trigger: CCCCGAAACCCCAGACATCAACCAGCTGCCGCCGTC...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGCGGGGGCTACATGCTTaGCCCAGGGAAGCCGGGAGA +
Preference number: 5 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMRGLHA*PREAGR
Trigger: TCTCCCGGCTTCCCTGGGCAAAGCATGTAGCCCCCG...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS-3UTR CAA 90 bp TGGTTAGTGGAAAGATTTGTGGGAGACTCGCAAGCCCCGGATCTCAGTGCTGTTTTTGAGCCCAGCTGCTaGAGTCCTTCATCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: WLVERFVGDSQAPDLSAVFEPSC*SPSSVS
Trigger: ACTCACTGATGAAGGACTCAAGCAGCTGGGCTCAAA...AACAGCACTGAGATCCGGGGCTTGCGAGTCTCCCACAAATCTTTCCACTAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp CCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTATGGGGAGAGGTCACGCCAGTACTaGCAAACCAATGATGCGGAA +
Preference number: 5 (lower is better)
Translates to: PLEPLLIMCWEWHLMYGERSRQY*QTNDAE
Trigger: TTCCGCATCATTGGTTTGCAAGTACTGGCGTGACCT...CTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTAGGTCACGCCAGTACTaGCAAACCAATGATGCGGAA +
Preference number: 5 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCRSRQY*QTNDAE
Trigger: TTCCGCATCATTGGTTTGCAAGTACTGGCGTGACCT...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS TCA 90 bp TCAGAGACTTGCTGCTCTGTGCAATCAGGGTGGCTCCTTGGTCTGTaGTTTCTTTACACCATCCGACATCCACAGTCTCTATTGTCATGC +
Preference number: 5 (lower is better)
Translates to: SETCCSVQSGWLLGL*FLYTIRHPQSLLSC
Trigger: GCATGACAATAGAGACTGTGGATGTCGGATGGTGTAAAGAAATCACAGACCAAGGAGCCACCCTGATTGCACAGAGCAGCAAGTCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496714.2
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTTTTGAGCCCAGCTGCTaGAGTCCTTCATCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: EISSPNVQFSSALLNDPSFEPSC*SPSSVS
Trigger: ACTCACTGATGAAGGACTCAAGCAGCTGGGCTCAAA...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTAGGTCACGCCAGTACTaGCAAACCAATGATGCGGAA +
Preference number: 5 (lower is better)
Translates to: KTLPRDQLPKCTILLCSARSRQY*QTNDAE
Trigger: TTCCGCATCATTGGTTTGCAAGTACTGGCGTGACCT...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTCCTTCATCAGTGAGTTaGTCCTGGTTGCCTACATGC +
Preference number: 5 (lower is better)
Translates to: KTLPRDQLPKCTILLCSAPSSVS*SWLPTC
Trigger: GCATGTAGGCAACCAGGACAAACTCACTGATGAAGG...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp GTCAGGAAACGATCTAGAGTAGATCAGAGCCCTGGTGTAGATGTGCACACGTGTCATCCACAGTCTCTATaGTCATGCTGTATCGCCCAA +
Preference number: 5 (lower is better)
Translates to: VRKRSRVDQSPGVDVHTCHPQSL*SCCIAQ
Trigger: TTGGGCGATACAGCATGACAATAGAGACTGTGGATG...ACACGTGTGCACATCTACACCAGGGCTCTGATCTACTCTAGATCGTTTCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp CCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTATGGGGAGAAATATCTCAGAGACTaGCTGCTCTGTGCAATCAGG +
Preference number: 5 (lower is better)
Translates to: PLEPLLIMCWEWHLMYGEKYLRD*LLCAIR
Trigger: CCTGATTGCACAGAGCAGCAAGTCTCTGAGATATTT...CTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp CCTCTGGAACCACTTCTTATCATGTGCTGGGAGTGGCATCTGATGTATGGGGAGAGCAGCGGCATTAGGTaGGTTAGTGGAAAGATTTGT +
Preference number: 5 (lower is better)
Translates to: PLEPLLIMCWEWHLMYGESSGIR*VSGKIC
Trigger: ACAAATCTTTCCACTAACCAACCTAATGCCGCTGCT...CTCCCCATACATCAGATGCCACTCCCAGCACATGATAAGAAGTGGTTCCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTAGAAGGCCTTCTTACTaGGACATCTCCAAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: EISSPNVQFSSALLNDPSRRPSY*DISKWQ
Trigger: CTGCCACTTGGAGATGTCCAAGTAAGAAGGCCTTCT...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTCCACCAGATAGCAAGTaGGCCACCCGAGGATACACG +
Preference number: 5 (lower is better)
Translates to: ESVSACTYNITSAVVIISPPDSK*ATRGYT
Trigger: CGTGTATCCTCGGGTGGCCAACTTGCTATCTGGTGG...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS GCA 90 bp ATCACATCTCATCAGCCCCAAATATCTCAGAGACTTGCTGCTCTGTaGAATCAGGGTGGCTCCTTGGTCTGTGATTTCTTTACACCATCC +
Preference number: 5 (lower is better)
Translates to: ITSHQPQISQRLAAL*NQGGSLVCDFFTPS
Trigger: GGATGGTGTAAAGAAATCACAGACCAAGGAGCCACCCTGATTGCACAGAGCAGCAAGTCTCTGAGATATTTGGGGCTGATGAGATGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000496714.2
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCCCTTCATCAGTGAGTTaGTCCTGGTTGCCTACATGC +
Preference number: 5 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLPSSVS*SWLPTC
Trigger: GCATGTAGGCAACCAGGACAAACTCACTGATGAAGG...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTCATCCACAGTCTCTATaGTCATGCTGTATCGCCCAA +
Preference number: 5 (lower is better)
Translates to: EISSPNVQFSSALLNDPSHPQSL*SCCIAQ
Trigger: TTGGGCGATACAGCATGACAATAGAGACTGTGGATG...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS GCA 90 bp GCTGCTTCCAAAACTGGAAGTCTAAACAAAGGTCACGCCAGTACTTaGAAACCAATGATGCGGAAAGGCAACGCTCATCCAGTGACAAAT +
Preference number: 5 (lower is better)
Translates to: AASKTGSLNKGHAST*KPMMRKGNAHPVTN
Trigger: ATTTGTCACTGGATGAGCGTTGCCTTTCCGCATCATTGGTTTGCAAGTACTGGCGTGACCTTTGTTTAGACTTCCAGTTTTGGAAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496714.2
ENST00000518486.1
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp TGGTTAGTGGAAAGATTTGTGGGAGACTCGCAAGCCCCGGATCTCAGTGCTGTTAGATTTTTGCACCTCTaGACAATTTCCATCACGGTT +
Preference number: 5 (lower is better)
Translates to: WLVERFVGDSQAPDLSAVRFLHL*TISITV
Trigger: AACCGTGATGGAAATTGTCAAGAGGTGCAAAAATCT...AACAGCACTGAGATCCGGGGCTTGCGAGTCTCCCACAAATCTTTCCACTAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTAAATATCTCAGAGACTaGCTGCTCTGTGCAATCAGG +
Preference number: 5 (lower is better)
Translates to: EISSPNVQFSSALLNDPSKYLRD*LLCAIR
Trigger: CCTGATTGCACAGAGCAGCAAGTCTCTGAGATATTT...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp GAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATGATCCCAGTAAAAAGCCAGCTCACTaGGGAACAAATGACAACTGC +
Preference number: 5 (lower is better)
Translates to: EISSPNVQFSSALLNDPSKKPAH*GTNDNC
Trigger: GCAGTTGTCATTTGTTCCCAAGTGAGCTGGCTTTTT...ACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTTTTGAGCCCAGCTGCTaGAGTCCTTCATCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: ESVSACTYNITSAVVIISFEPSC*SPSSVS
Trigger: ACTCACTGATGAAGGACTCAAGCAGCTGGGCTCAAA...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp TCATTTGCCCCCACATTTGCTACATTTAGAAGATGCATGCCCTTTGAATGGCGTCATGAAGCCTACATATaGAAGCTCAGGACAGTGTTC +
Preference number: 5 (lower is better)
Translates to: SFAPTFATFRRCMPFEWRHEAYI*KLRTVF
Trigger: GAACACTGTCCTGAGCTTCAATATGTAGGCTTCATG...ACGCCATTCAAAGGGCATGCATCTTCTAAATGTAGCAAATGTGGGGGCAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp CATTCTCCTGTAGTAACTGTAACATACAACTTCTACAGTGTATCTCCGAAGATGCAGAGCCTCTCGTGTTaGGCTCTGAGCTGCTTTAAG +
Preference number: 5 (lower is better)
Translates to: HSPVVTVTYNFYSVSPKMQSLSC*ALSCFK
Trigger: CTTAAAGCAGCTCAGAGCCAAACACGAGAGGCTCTG...CATCTTCGGAGATACACTGTAGAAGTTGTATGTTACAGTTACTACAGGAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGAAATTGGAAAATATCTaGAGCAGGATGGACGGCGGC +
Preference number: 5 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMKLENI*SRMDGG
Trigger: GCCGCCGTCCATCCTGCTCAAGATATTTTCCAATTT...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTATGACAACTGCACTTTaGGTATGCAGTATGCAAACA +
Preference number: 5 (lower is better)
Translates to: KTLPRDQLPKCTILLCSAMTTAL*VCSMQT
Trigger: TGTTTGCATACTGCATACCAAAAGTGCAGTTGTCAT...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCACCACCAGATAGCAAGTaGGCCACCCGAGGATACACG +
Preference number: 5 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPPPDSK*ATRGYT
Trigger: CGTGTATCCTCGGGTGGCCAACTTGCTATCTGGTGG...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp AAAACCCTTCCGAGAGATCAGCTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGTTTTCCAGATTATGTaGCATCAGGCTTTCTGGATT +
Preference number: 5 (lower is better)
Translates to: KTLPRDQLPKCTILLCSAVFQIM*HQAFWI
Trigger: AATCCAGAAAGCCTGATGCAACATAATCTGGAAAAC...AGCAGAGCAGAGGAGAATTGTACATTTGGGGAGCTGATCTCTCGGAAGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp GAGAGTGTAAGTGCCTGTACGTATAACATCACTTCTGCTGTAGTCATCATCAGTCATGAAGCCTACATATaGAAGCTCAGGACAGTGTTC +
Preference number: 5 (lower is better)
Translates to: ESVSACTYNITSAVVIISHEAYI*KLRTVF
Trigger: GAACACTGTCCTGAGCTTCAATATGTAGGCTTCATG...ACTGATGATGACTACAGCAGAAGTGATGTTATACGTACAGGCACTTACACTCTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp TACTTGAACACACACAGACAGGTGACAGTTAAAACCCTTCCGAGAGATCAGCTCAGATTTTTGCACCTCTaGACAATTTCCATCACGGTT +
Preference number: 5 (lower is better)
Translates to: YLNTHRQVTVKTLPRDQLRFLHL*TISITV
Trigger: AACCGTGATGGAAATTGTCAAGAGGTGCAAAAATCT...GAGCTGATCTCTCGGAAGGGTTTTAACTGTCACCTGTCTGTGTGTGTTCAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGAAATATCTCAGAGACTaGCTGCTCTGTGCAATCAGG +
Preference number: 5 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMKYLRD*LLCAIR
Trigger: CCTGATTGCACAGAGCAGCAAGTCTCTGAGATATTT...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp AACATAACTAGCTGGCAAAGGTCTCGTATAAGTTGGGATTCTAAAGTGTTTGGATGGGCCATACTTCATTaGCCCCCACATTTGCTACAT +
Preference number: 5 (lower is better)
Translates to: NITSWQRSRISWDSKVFGWAILH*PPHLLH
Trigger: ATGTAGCAAATGTGGGGGCAAATGAAGTATGGCCCA...TCCAAACACTTTAGAATCCCAACTTATACGAGACCTTTGCCAGCTAGTTATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp CATTCTCCTGTAGTAACTGTAACATACAACTTCTACAGTGTATCTCCGAAGATGAAGGACACAAGAGCTTaGGGCCATACTTCATTTGCC +
Preference number: 5 (lower is better)
Translates to: HSPVVTVTYNFYSVSPKMKDTRA*GHTSFA
Trigger: GGCAAATGAAGTATGGCCCAAAGCTCTTGTGTCCTT...CATCTTCGGAGATACACTGTAGAAGTTGTATGTTACAGTTACTACAGGAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp AAGCATCTAATGAGAACACATTCAACAACCATCACAGGACCACTCAAGGTGATGAGATTTTTGCACCTCTaGACAATTTCCATCACGGTT +
Preference number: 5 (lower is better)
Translates to: KHLMRTHSTTITGPLKVMRFLHL*TISITV
Trigger: AACCGTGATGGAAATTGTCAAGAGGTGCAAAAATCT...CATCACCTTGAGTGGTCCTGTGATGGTTGTTGAATGTGTTCTCATTAGATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp AACATAACTAGCTGGCAAAGGTCTCGTATAAGTTGGGATTCTAAAGTGTTTGGATGTGCAAGGCTTTACTaGTGCTTTGTGTGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: NITSWQRSRISWDSKVFGCARLY*CFVCGL
Trigger: CAAACCACACACAAAGCACAAGTAAAGCCTTGCACA...TCCAAACACTTTAGAATCCCAACTTATACGAGACCTTTGCCAGCTAGTTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS-3UTR CAA 90 bp AAACCGGGTGAATTTTCTTTATCCACTCAAAAAGACATTAAAGACAAAGGACCAAAATTGGAAAATATCTaGAGCAGGATGGACGGCGGC +
Preference number: 5 (lower is better)
Translates to: KPGEFSLSTQKDIKDKGPKLENI*SRMDGG
Trigger: GCCGCCGTCCATCCTGCTCAAGATATTTTCCAATTT...TGGTCCTTTGTCTTTAATGTCTTTTTGAGTGGATAAAGAAAATTCACCCGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS-3UTR CAA 90 bp CACAATTCATCCCATGTAAAAAGAAGGCCTTCTTACTTGGACATCTCCAAGTGGGGAGAGTTCAGACTGTaGCCTCTATATAACAAATTT +
Preference number: 5 (lower is better)
Translates to: HNSSHVKRRPSYLDISKWGEFRL*PLYNKF
Trigger: AAATTTGTTATATAGAGGCAACAGTCTGAACTCTCC...CCACTTGGAGATGTCCAAGTAAGAAGGCCTTCTTTTTACATGGGATGAATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS GCA 72 bp GCTCCCAGGCGGCGGCCGCAGCCAGCCCCAACTCTTTaGAGCAGGAGGCGGGCGACGAAGCCGAGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: APRRRPQPAPTL*SRRRATKPRRQ
Trigger: CTGCCGCCTCGGCTTCGTCGCCCGCCTCCTGCTGCAAAGAGTTGGGGCTGGCTGCGGCCGCCGCCTGGGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS CCA 72 bp CGCACACACACGCACACACGGGCACACACGCGACGGTaGGGGGTGGGCGTCAGCTGCGGGCCGCCGGAGTGC +
Preference number: 6 (lower is better)
Translates to: RTHTHTRAHTRR*GVGVSCGPPEC
Trigger: GCACTCCGGCGGCCCGCAGCTGACGCCCACCCCCCACCGTCGCGTGTGTGCCCGTGTGTGCGTGTGTGTGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS GCA 72 bp GCTCGCTGGCTCGGCCCCCGGAGGGGTCGCCCTTCCTaGGCACACACACGCACACACGGGCACACACGCGAC +
Preference number: 6 (lower is better)
Translates to: ARWLGPRRGRPS*AHTRTHGHTRD
Trigger: GTCGCGTGTGTGCCCGTGTGTGCGTGTGTGTGCGCAGGAAGGGCGACCCCTCCGGGGGCCGAGCCAGCGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS GCA 72 bp ACCGGCCCCAAGCTGGCCAGGAAGAGACTTCGGCCCTaGTGCTCCCAGGCGGCGGCCGCAGCCAGCCCCAAC +
Preference number: 6 (lower is better)
Translates to: TGPKLARKRLRP*CSQAAAAASPN
Trigger: GTTGGGGCTGGCTGCGGCCGCCGCCTGGGAGCAGCAGGGCCGAAGTCTCTTCCTGGCCAGCTTGGGGCCGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS CCA 72 bp GCCCAGGGAAGCCGGGAGAACGATGGGCGCGAGCTTTaGGGACGCGAGGGAGGGAGCGAGCGAGCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: AQGSRENDGREL*GREGGSERACR
Trigger: CCGGCAGGCTCGCTCGCTCCCTCCCTCGCGTCCCCAAAGCTCGCGCCCATCGTTCTCCCGGCTTCCCTGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS CAA 72 bp GCGGGCCGCCGGAGTGCCCGACGGGGGCTACATGCTTaGCCCAGGGAAGCCGGGAGAACGATGGGCGCGAGC +
Preference number: 6 (lower is better)
Translates to: AGRRSARRGLHA*PREAGRTMGAS
Trigger: GCTCGCGCCCATCGTTCTCCCGGCTTCCCTGGGCAAAGCATGTAGCCCCCGTCGGGCACTCCGGCGGCCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS CAA 72 bp TGCTCCCAGGCGGCGGCCGCAGCCAGCCCCAACTCTTaGCAGCAGGAGGCGGGCGACGAAGCCGAGGCGGCA +
Preference number: 6 (lower is better)
Translates to: CSQAAAAASPNS*QQEAGDEAEAA
Trigger: TGCCGCCTCGGCTTCGTCGCCCGCCTCCTGCTGCAAAGAGTTGGGGCTGGCTGCGGCCGCCGCCTGGGAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS GCA 72 bp GACTCCCGACAGTCCGCGTCGCCACATTCATGCTGCTaGTGGGCGGACAAGGGGGCGGTGCCCCCGGCTCGG +
Preference number: 6 (lower is better)
Translates to: DSRQSASPHSCC*WADKGAVPPAR
Trigger: CCGAGCCGGGGGCACCGCCCCCTTGTCCGCCCAGCAGCAGCATGAATGTGGCGACGCGGACTGTCGGGAGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518486.1
ENST00000542267.7
ENST00000619412.4
CDS GCA 72 bp CGGGGAAAGGCCGGGTCCCGCTCGGACCATTTTAACTaGGGATCCGCCGCCGGCGCGCGCACCCGCGACTCT +
Preference number: 6 (lower is better)
Translates to: RGKAGSRSDHFN*GSAAGARTRDS
Trigger: AGAGTCGCGGGTGCGCGCGCCGGCGGCGGATCCGCAGTTAAAATGGTCCGAGCGGGACCCGGCCTTTCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS GCA 72 bp CGGGCCGCCGGAGTGCCCGACGGGGGCTACATGCTTTaGCCAGGGAAGCCGGGAGAACGATGGGCGCGAGCT +
Preference number: 6 (lower is better)
Translates to: RAAGVPDGGYML*PGKPGERWARA
Trigger: AGCTCGCGCCCATCGTTCTCCCGGCTTCCCTGGGCAAAGCATGTAGCCCCCGTCGGGCACTCCGGCGGCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS GCA 72 bp GGCCCCAAGCTGGCCAGGAAGAGACTTCGGCCCTGCTaGTCCCAGGCGGCGGCCGCAGCCAGCCCCAACTCT +
Preference number: 6 (lower is better)
Translates to: GPKLARKRLRPC*SQAAAAASPNS
Trigger: AGAGTTGGGGCTGGCTGCGGCCGCCGCCTGGGAGCAGCAGGGCCGAAGTCTCTTCCTGGCCAGCTTGGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS CAA 72 bp TGCCCAGGGAAGCCGGGAGAACGATGGGCGCGAGCTTaGGGGACGCGAGGGAGGGAGCGAGCGAGCCTGCCG +
Preference number: 6 (lower is better)
Translates to: CPGKPGERWARA*GTRGRERASLP
Trigger: CGGCAGGCTCGCTCGCTCCCTCCCTCGCGTCCCCAAAGCTCGCGCCCATCGTTCTCCCGGCTTCCCTGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS CAA 90 bp GCGTCAGCTGCGGGCCGCCGGAGTGCCCGACGGGGGCTACATGCTTaGCCCAGGGAAGCCGGGAGAACGATGGGCGCGAGCTTTGGGGAC +
Preference number: 6 (lower is better)
Translates to: ASAAGRRSARRGLHA*PREAGRTMGASFGD
Trigger: GTCCCCAAAGCTCGCGCCCATCGTTCTCCCGGCTTCCCTGGGCAAAGCATGTAGCCCCCGTCGGGCACTCCGGCGGCCCGCAGCTGACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS CCA 72 bp TCCCGACAGTCCGCGTCGCCACATTCATGCTGCTGCTaGGCGGACAAGGGGGCGGTGCCCCCGGCTCGGACA +
Preference number: 6 (lower is better)
Translates to: SRQSASPHSCCC*ADKGAVPPART
Trigger: TGTCCGAGCCGGGGGCACCGCCCCCTTGTCCGCCCAGCAGCAGCATGAATGTGGCGACGCGGACTGTCGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518486.1
ENST00000542267.7
ENST00000619412.4
CDS CAA 90 bp TACATGCTTTGCCCAGGGAAGCCGGGAGAACGATGGGCGCGAGCTTaGGGGACGCGAGGGAGGGAGCGAGCGAGCCTGCCGGCTAGGCGA +
Preference number: 6 (lower is better)
Translates to: YMLCPGKPGERWARA*GTRGRERASLPARR
Trigger: TCGCCTAGCCGGCAGGCTCGCTCGCTCCCTCCCTCGCGTCCCCAAAGCTCGCGCCCATCGTTCTCCCGGCTTCCCTGGGCAAAGCATGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS CCA 72 bp CGGCGGCGGCACCAACTGCAACAGCGAGGCCTCTTCTaGCTCGGGCGGTTACGCGGCTCCTTCGAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: RRRHQLQQRGLF*LGRLRGSFERR
Trigger: CCTTCTCTCGAAGGAGCCGCGTAACCGCCCGAGCCAGAAGAGGCCTCGCTGTTGCAGTTGGTGCCGCCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS CCA 72 bp GGCTACATGCTTTGCCCAGGGAAGCCGGGAGAACGATaGGCGCGAGCTTTGGGGACGCGAGGGAGGGAGCGA +
Preference number: 6 (lower is better)
Translates to: GYMLCPGKPGER*ARALGTRGRER
Trigger: TCGCTCCCTCCCTCGCGTCCCCAAAGCTCGCGCCCATCGTTCTCCCGGCTTCCCTGGGCAAAGCATGTAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542267.7
CDS GCA 72 bp TCCTGCAGGACGGTGCTGAAGGTGATGTGGGGGTACTaGTGCACCAGCTGTTCCACCGTCACTTCGTTGACT +
Preference number: 6 (lower is better)
Translates to: SCRTVLKVMWGY*CTSCSTVTSLT
Trigger: AGTCAACGAAGTGACGGTGGAACAGCTGGTGCAGCAGTACCCCCACATCACCTTCAGCACCGTCCTGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS TCA 72 bp CTCCCCAAATGTACAATTCTCCTCTGCTCTGCTGAATaGTCCCAGTGGACTAGGCGAGGCAGGAGCGCTAGG +
Preference number: 6 (lower is better)
Translates to: LPKCTILLCSAE*SQWTRRGRSAR
Trigger: CCTAGCGCTCCTGCCTCGCCTAGTCCACTGGGATCATTCAGCAGAGCAGAGGAGAATTGTACATTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS TCA 72 bp TGCTGCTCTGTGCAATCAGGGTGGCTCCTTGGTCTGTaGTTTCTTTACACCATCCGACATCCACAGTCTCTA +
Preference number: 6 (lower is better)
Translates to: CCSVQSGWLLGL*FLYTIRHPQSL
Trigger: TAGAGACTGTGGATGTCGGATGGTGTAAAGAAATCACAGACCAAGGAGCCACCCTGATTGCACAGAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496714.2
ENST00000542267.7
ENST00000619412.4
CDS GCA 72 bp TATCACATCTCATCAGCCCCAAATATCTCAGAGACTTaGTGCTCTGTGCAATCAGGGTGGCTCCTTGGTCTG +
Preference number: 6 (lower is better)
Translates to: YHISSAPNISET*CSVQSGWLLGL
Trigger: CAGACCAAGGAGCCACCCTGATTGCACAGAGCAGCAAGTCTCTGAGATATTTGGGGCTGATGAGATGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000496714.2
ENST00000542267.7
ENST00000619412.4
CDS CCA 72 bp AGAGACTTGCTGCTCTGTGCAATCAGGGTGGCTCCTTaGTCTGTGATTTCTTTACACCATCCGACATCCACA +
Preference number: 6 (lower is better)
Translates to: RDLLLCAIRVAP*SVISLHHPTST
Trigger: TGTGGATGTCGGATGGTGTAAAGAAATCACAGACCAAGGAGCCACCCTGATTGCACAGAGCAGCAAGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496714.2
ENST00000542267.7
ENST00000619412.4
CDS CAA 90 bp AGCTGCTTCCAAAACTGGAAGTCTAAACAAAGGTCACGCCAGTACTaGCAAACCAATGATGCGGAAAGGCAACGCTCATCCAGTGACAAA +
Preference number: 6 (lower is better)
Translates to: SCFQNWKSKQRSRQY*QTNDAERQRSSSDK
Trigger: TTTGTCACTGGATGAGCGTTGCCTTTCCGCATCATTGGTTTGCAAGTACTGGCGTGACCTTTGTTTAGACTTCCAGTTTTGGAAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496714.2
ENST00000518486.1
ENST00000542267.7
ENST00000619412.4
CDS CAA 90 bp CAAATATCTCAGAGACTTGCTGCTCTGTGCAATCAGGGTGGCTCCTaGGTCTGTGATTTCTTTACACCATCCGACATCCACAGTCTCTAT +
Preference number: 6 (lower is better)
Translates to: QISQRLAALCNQGGS*VCDFFTPSDIHSLY
Trigger: ATAGAGACTGTGGATGTCGGATGGTGTAAAGAAATCACAGACCAAGGAGCCACCCTGATTGCACAGAGCAGCAAGTCTCTGAGATATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496714.2
ENST00000542267.7
ENST00000619412.4
CDS CAA 90 bp TCGTTGACTTTATCACATCTCATCAGCCCCAAATATCTCAGAGACTaGCTGCTCTGTGCAATCAGGGTGGCTCCTTGGTCTGTGATTTCT +
Preference number: 6 (lower is better)
Translates to: SLTLSHLISPKYLRD*LLCAIRVAPWSVIS
Trigger: AGAAATCACAGACCAAGGAGCCACCCTGATTGCACAGAGCAGCAAGTCTCTGAGATATTTGGGGCTGATGAGATGTGATAAAGTCAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542267.7
ENST00000619412.4
CDS CAA 72 bp CAAAACTGGAAGTCTAAACAAAGGTCACGCCAGTACTaGCAAACCAATGATGCGGAAAGGCAACGCTCATCC +
Preference number: 6 (lower is better)
Translates to: QNWKSKQRSRQY*QTNDAERQRSS
Trigger: GGATGAGCGTTGCCTTTCCGCATCATTGGTTTGCAAGTACTGGCGTGACCTTTGTTTAGACTTCCAGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496714.2
ENST00000518486.1
ENST00000542267.7
ENST00000619412.4
CDS CAA 90 bp ACTCTTACTTTATCACATCTCATCAGCCCCAAATATCTCAGAGACTaGCTGCTCTGTGCAATCAGGGTGGCTCCTTGGTCTGTGATTTCT +
Preference number: 6 (lower is better)
Translates to: TLTLSHLISPKYLRD*LLCAIRVAPWSVIS
Trigger: AGAAATCACAGACCAAGGAGCCACCCTGATTGCACAGAGCAGCAAGTCTCTGAGATATTTGGGGCTGATGAGATGTGATAAAGTAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496714.2
CDS GCA 72 bp CTTTACACCATCCGACATCCACAGTCTCTATTGTCATaGTGTATCGCCCAATGGCTATCAGTGCATAATCTG +
Preference number: 6 (lower is better)
Translates to: LYTIRHPQSLLS*CIAQWLSVHNL
Trigger: CAGATTATGCACTGATAGCCATTGGGCGATACAGCATGACAATAGAGACTGTGGATGTCGGATGGTGTAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496714.2
ENST00000542267.7
ENST00000619412.4
CDS TCA 72 bp CAGACAGCCCTTAGCTATGACGATCATGCCTTCATCTaGGATCTTGTAACACTGGCCGAAATGAATATCTTT +
Preference number: 6 (lower is better)
Translates to: QTALSYDDHAFI*DLVTLAEMNIF
Trigger: AAAGATATTCATTTCGGCCAGTGTTACAAGATCTCAGATGAAGGCATGATCGTCATAGCTAAGGGCTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481160.1
ENST00000496714.2
ENST00000542267.7
ENST00000619412.4
CDS CAA 90 bp ATGACCTCCACACACCTGTCATTTATGATCCAGTTCAGACAGAGATaGAGAGAGCTAAGATTTTTGCACCTCTTGACAATTTCCATCACG +
Preference number: 6 (lower is better)
Translates to: MTSTHLSFMIQFRQR*RELRFLHLLTISIT
Trigger: CGTGATGGAAATTGTCAAGAGGTGCAAAAATCTTAGCTCTCTCAATCTCTGTCTGAACTGGATCATAAATGACAGGTGTGTGGAGGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000481160.1
ENST00000496714.2
ENST00000542267.7
ENST00000619412.4
CDS TCA 72 bp TTAGAAGTGACTGAACAACCCATGAAGCCTACATATTaGAGCTCAGGACAGTGTTCAGCAAATGCTTTCACT +
Preference number: 6 (lower is better)
Translates to: LEVTEQPMKPTY*SSGQCSANAFT
Trigger: AGTGAAAGCATTTGCTGAACACTGTCCTGAGCTTCAATATGTAGGCTTCATGGGTTGTTCAGTCACTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481160.1
ENST00000496714.2
ENST00000542267.7
ENST00000619412.4
CDS CAA 72 bp AGACAGAGATTGAGAGAGCTAAGATTTTTGCACCTCTaGACAATTTCCATCACGGTTTCATTATCCAGTTCA +
Preference number: 6 (lower is better)
Translates to: RQRLRELRFLHL*TISITVSLSSS
Trigger: TGAACTGGATAATGAAACCGTGATGGAAATTGTCAAGAGGTGCAAAAATCTTAGCTCTCTCAATCTCTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000481160.1
ENST00000496714.2
ENST00000542267.7
ENST00000619412.4
CDS CAA 72 bp ATCCAGTTCAGACAGAGATTGAGAGAGCTAAGATTTTaGCACCTCTTGACAATTTCCATCACGGTTTCATTA +
Preference number: 6 (lower is better)
Translates to: IQFRQRLRELRF*HLLTISITVSL
Trigger: TAATGAAACCGTGATGGAAATTGTCAAGAGGTGCAAAAATCTTAGCTCTCTCAATCTCTGTCTGAACTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481160.1
ENST00000496714.2
ENST00000542267.7
ENST00000619412.4
CDS CAA 90 bp TCATTTATGATCCAGTTCAGACAGAGATTGAGAGAGCTAAGATTTTaGCACCTCTTGACAATTTCCATCACGGTTTCATTATCCAGTTCA +
Preference number: 6 (lower is better)
Translates to: SFMIQFRQRLRELRF*HLLTISITVSLSSS
Trigger: TGAACTGGATAATGAAACCGTGATGGAAATTGTCAAGAGGTGCAAAAATCTTAGCTCTCTCAATCTCTGTCTGAACTGGATCATAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481160.1
ENST00000496714.2
ENST00000542267.7
ENST00000619412.4