RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXL16 (Homo sapiens)

Ensembl gene IDs: ENSG00000127585

Ensembl transcript IDs: ENST00000324361.9, ENST00000397621.6, ENST00000562563.1, ENST00000562648.2

Found 505 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCTCTCGGCGGCGGGCCATGGCTTTGGCGGTGGCCTGTTTCCCCTaGCACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCA +
Preference number: 1 (lower is better)
Translates to: GSRRRAMALAVACFP*HPSEGSRYGAVEDA
Trigger: TGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCGCCAAAGCCATGGCCCGCCGCCGAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR TCA 90 bp GCTGGGTCCACTCTGCAGACTCCACCTGAGGAGACCCACCCAGGGTaGAGCTCGGTGCCCAGGCCTGAACTGAGCCCGGCCGGGTGCAAG +
Preference number: 1 (lower is better)
Translates to: AGSTLQTPPEETHPG*SSVPRPELSPAGCK
Trigger: CTTGCACCCGGCCGGGCTCAGTTCAGGCCTGGGCACCGAGCTTCACCCTGGGTGGGTCTCCTCAGGTGGAGTCTGCAGAGTGGACCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR GCA 90 bp CCTCTTCCCAGGCCTGAGGGTGGCTACAGCTCGAGGCTTGCAAGGTaGCTGCGCCACCCCTGGGTTGAGGCCGACCGGAGTCAGCTGGGA +
Preference number: 1 (lower is better)
Translates to: PLPRPEGGYSSRLAR*LRHPWVEADRSQLG
Trigger: TCCCAGCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTCAGGCCTGGGAAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR CCA 90 bp TCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTaGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAGCCCCCTCAA +
Preference number: 1 (lower is better)
Translates to: SEGSRYGAVEDAGSP*GSSGPVSWGTQPPQ
Trigger: TTGAGGGGGCTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR GCA 90 bp TTCCCAGGCCTGAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTaGGCCACCCCTGGGTTGAGGCCGACCGGAGTCAGCTGGGATCAC +
Preference number: 1 (lower is better)
Translates to: FPGLRVATARGLQGA*ATPGLRPTGVSWDH
Trigger: GTGATCCCAGCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTCAGGCCTGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR CCA 90 bp CAAGGTGCCTGCGCCACCCCTGGGTTGAGGCCGACCGGAGTCAGCTaGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGCCC +
Preference number: 1 (lower is better)
Translates to: QGACATPGLRPTGVS*DHVNDSKRSPALPP
Trigger: GGGCGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCACCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR CCA 90 bp GAAAGGAGCCCTCCCTCCTCGGGGTGTCTAGGGTGTGCTGGCCACTaGAAGATTGGAGTCGCTGACCCAGTGCTGACCCTGACCCTTGGC +
Preference number: 1 (lower is better)
Translates to: ERSPPSSGCLGCAGH*KIGVADPVLTLTLG
Trigger: GCCAAGGGTCAGGGTCAGCACTGGGTCAGCGACTCCAATCTTCCAGTGGCCAGCACACCCTAGACACCCCGAGGAGGGAGGGCTCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR TCA 90 bp TGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTaGGGCCGACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGC +
Preference number: 1 (lower is better)
Translates to: WLQLEACKVPAPPLG*GRPESAGITLMTPS
Trigger: GCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR GCA 90 bp CACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGCCCTCTCCCTaGCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGG +
Preference number: 1 (lower is better)
Translates to: HVNDSKRSPALPPSP*PILSAWPGTKAGFW
Trigger: CCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGGGAGAGGGCGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR CCA 90 bp GACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTaGGCAGACAGAAGTTTGGGAAGCTGGGGAGGGGTGAAGTGGGGG +
Preference number: 1 (lower is better)
Translates to: DFQMSRADRARSEPI*ADRSLGSWGGVKWG
Trigger: CCCCCACTTCACCCCTCCCCAGCTTCCCAAACTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR CCA 90 bp CTCTCTCTCTCTCACTCTCTTTCTCTCTCTCACTCTCTGGCTCTCTaGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAG +
Preference number: 1 (lower is better)
Translates to: LSLSHSLSLSHSLAL*KLVTLFQPDRECPK
Trigger: CTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGAAAGAGAGTGAGAGAGAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR CCA 90 bp TCTCTCACTCTCTTTCTCTCTCTCACTCTCTGGCTCTCTGGAAACTaGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGT +
Preference number: 1 (lower is better)
Translates to: SLTLFLSLTLWLSGN*LLSSNQIGSVPRLG
Trigger: ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGAAAGAGAGTGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR CCA 90 bp CTCTCTTTCTCTCTCTCTCTCACTCTCTTTCTCTCTCTCACTCTCTaGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGT +
Preference number: 1 (lower is better)
Translates to: LSFSLSLTLFLSLTL*LSGNWLLSSNQIGS
Trigger: ACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGAAAGAGAGTGAGAGAGAGAGAGAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR GCA 90 bp AAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAGCCAAAGTCCCCGAGTGTaGGTGCGTGCGTGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: KMQEARGALLGPCPGGPSQSPRV*VRAWGG
Trigger: CCCGCCCCACGCACGCACGCACACTCGGGGACTTTG...GCTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACCCCCCTCAATCCCACTaGGCCCTGCCCGGGATGGGG +
Preference number: 2 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADPPQSH*ALPGMG
Trigger: CCCCATCCCGGGCAGGGCCCAGTGGGATTGAGGGGG...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR TCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCCTCGGTGCCCAGGCCTaGACTGAGCCCGGCCGGGTG +
Preference number: 2 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALLGAQA*TEPGRV
Trigger: CACCCGGCCGGGCTCAGTTCAGGCCTGGGCACCGAG...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR GCA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCGAGGGCGGCGTGCAGTaGGGGCACGAGGGGCATGCA +
Preference number: 2 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFEGGVQ*GHEGHA
Trigger: TGCATGCCCCTCGTGCCCGCACTGCACGCCGCCCTC...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR GCA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGGAGGGCGGCGTGCAGTaGGGGCACGAGGGGCATGCA +
Preference number: 2 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCREGGVQ*GHEGHA
Trigger: TGCATGCCCCTCGTGCCCGCACTGCACGCCGCCCTC...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCCCCGTGGGGCTCTTCTaGGCCCGTGTCCTGGGGGAC +
Preference number: 2 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALPVGLF*ARVLGD
Trigger: GTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGG...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR CCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGACCAAGGCCGGGTTTTaGGGCGGACAGGGGACTGCC +
Preference number: 2 (lower is better)
Translates to: EGGYSSRLARCLRHPWVETKAGF*GGQGTA
Trigger: GGCAGTCCCCTGTCCGCCCCAAAACCCGGCCTTGGT...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR TCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGCTCGGTGCCCAGGCCTaGACTGAGCCCGGCCGGGTG +
Preference number: 2 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKLGAQA*TEPGRV
Trigger: CACCCGGCCGGGCTCAGTTCAGGCCTGGGCACCGAG...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR TCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCGAGACCCACCCAGGGTaGAGCTCGGTGCCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALETHPG*SSVPRP
Trigger: AGGCCTGGGCACCGAGCTTCACCCTGGGTGGGTCTC...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR GCA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGGTCCCCGAGTGTGCGTaGGTGCGTGGGGCGGGCCCA +
Preference number: 2 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPVPECA*VRGAGP
Trigger: TGGGCCCGCCCCACGCACGCACGCACACTCGGGGAC...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCCCGCGTGGGTCAGGCTaGATGGGTGAGGAGGTGCGG +
Preference number: 2 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALPRGSG*MGEEVR
Trigger: CCGCACCTCCTCACCCATCCAGCCTGACCCACGCGG...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR CCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGCCAATTCTCTCAGCCTaGCCAGGGACCAAGGCCGGG +
Preference number: 2 (lower is better)
Translates to: EGGYSSRLARCLRHPWVEPILSA*PGTKAG
Trigger: CCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGG...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR TCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGAGCGCCACCCCTGGGTTaGGGCCGACCGGAGTCAGCT +
Preference number: 2 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRAPPLG*GRPESA
Trigger: AGCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGC...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR TCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGGCGCCACCCCTGGGTTaGGGCCGACCGGAGTCAGCT +
Preference number: 2 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQAPPLG*GRPESA
Trigger: AGCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGC...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR TCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGGCCGGGTGCAAGGGCTaGGGTGTGAGGTCGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKAGCKG*GVRSAQ
Trigger: CTGGGCCGACCTCACACCTCAGCCCTTGCACCCGGC...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR TCA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGTGCCCAGGCCTGAACTaGGCCCGGCCGGGTGCAAGG +
Preference number: 2 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQCPGLN*ARPGAR
Trigger: CCTTGCACCCGGCCGGGCTCAGTTCAGGCCTGGGCA...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGCCCCCTCAATCCCACTaGGCCCTGCCCGGGATGGGG +
Preference number: 2 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQPPQSH*ALPGMG
Trigger: CCCCATCCCGGGCAGGGCCCAGTGGGATTGAGGGGG...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGTCTGGGCCCGTGTCCTaGGGGACCCAGCCCCCTCAA +
Preference number: 2 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMSGPVS*GTQPPQ
Trigger: TTGAGGGGGCTGGGTCCCCCAGGACACGGGCCCAGA...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGGGAGGGCTCCAGGTATaGTGCGGTGGAAGATGCAGG +
Preference number: 2 (lower is better)
Translates to: EGGYSSRLARCLRHPWVEGGLQV*CGGRCR
Trigger: CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR TCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCTCTGCAGACTCCACCTaGGGAGACCCACCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALSADST*GDPPRV
Trigger: CACCCTGGGTGGGTCTCCTCAGGTGGAGTCTGCAGA...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR GCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGGGGCGGACAGGGGACTaGCCCACACAGCGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQGRTGD*PTQRQG
Trigger: TCCTTGCCGCTGTGTGGGGCAGTCCCCTGTCCGCCC...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR GCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGGGGCGGACAGGGGACTaGCCCACACAGCGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKGRTGD*PTQRQG
Trigger: TCCTTGCCGCTGTGTGGGGCAGTCCCCTGTCCGCCC...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR GCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGGGCTTGCAAGGTGCCTaGGCCACCCCTGGGTTGAGG +
Preference number: 2 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMGLQGA*ATPGLR
Trigger: CCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCC...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGTCTGGGCCCGTGTCCTaGGGGACCCAGCCCCCTCAA +
Preference number: 2 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQSGPVS*GTQPPQ
Trigger: TTGAGGGGGCTGGGTCCCCCAGGACACGGGCCCAGA...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGGTGGGTCAGGCTGGATaGGTGAGGAGGTGCGGGTGG +
Preference number: 2 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMVGQAG*VRRCGW
Trigger: CCACCCGCACCTCCTCACCCATCCAGCCTGACCCAC...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGCCGCGTGGGTCAGGCTaGATGGGTGAGGAGGTGCGG +
Preference number: 2 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQPRGSG*MGEEVR
Trigger: CCGCACCTCCTCACCCATCCAGCCTGACCCACGCGG...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCCCAATTCTCTCAGCCTaGCCAGGGACCAAGGCCGGG +
Preference number: 2 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALPILSA*PGTKAG
Trigger: CCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGG...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR CCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGTGCCTGCGCCACCCCTaGGTTGAGGCCGACCGGAGT +
Preference number: 2 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQCLRHP*VEADRS
Trigger: ACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCA...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR CAA 90 bp GTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTaGAGGCCGACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAG +
Preference number: 2 (lower is better)
Translates to: VATARGLQGACATPG*RPTGVSWDHVNDSK
Trigger: CTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGGTGGGTCAGGCTGGATaGGTGAGGAGGTGCGGGTGG +
Preference number: 2 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPVGQAG*VRRCGW
Trigger: CCACCCGCACCTCCTCACCCATCCAGCCTGACCCAC...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGACCAAGGCCGGGTTTTaGGGCGGACAGGGGACTGCC +
Preference number: 2 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKTKAGF*GGQGTA
Trigger: GGCAGTCCCCTGTCCGCCCCAAAACCCGGCCTTGGT...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR GCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCCAAAGTCCCCGAGTGTaGGTGCGTGCGTGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRQSPRV*VRAWGG
Trigger: CCCGCCCCACGCACGCACGCACACTCGGGGACTTTG...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR GCA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGTGGTGCGGTGGAAGATaGAGGAAGCCCGTGGGGCTC +
Preference number: 2 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQWCGGR*RKPVGL
Trigger: GAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCA...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR GCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGATGGTGCGGTGGAAGATaGAGGAAGCCCGTGGGGCTC +
Preference number: 2 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRWCGGR*RKPVGL
Trigger: GAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCA...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR GCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCGGGCGGACAGGGGACTaGCCCACACAGCGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRGRTGD*PTQRQG
Trigger: TCCTTGCCGCTGTGTGGGGCAGTCCCCTGTCCGCCC...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR GCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGCTTCCGCCCTCTCCCTaGCCAATTCTCTCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMLPPSP*PILSAW
Trigger: CCAGGCTGAGAGAATTGGGCAGGGAGAGGGCGGAAG...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR GCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGTCGAGGCTTGCAAGGTaGCTGCGCCACCCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQSRLAR*LRHPWV
Trigger: AACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGA...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCCTCGGCGGCGGGCCATaGCTTTGGCGGTGGCCTGTT +
Preference number: 2 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRLGGGP*LWRWPV
Trigger: AACAGGCCACCGCCAAAGCCATGGCCCGCCGCCGAG...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCTGCCTGCGCCACCCCTaGGTTGAGGCCGACCGGAGT +
Preference number: 2 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRCLRHP*VEADRS
Trigger: ACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCA...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCGGGTGTGCTGGCCACTaGAAGATTGGAGTCGCTGAC +
Preference number: 2 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALGCAGH*KIGVAD
Trigger: GTCAGCGACTCCAATCTTCCAGTGGCCAGCACACCC...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR CAA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTaGGGCAGACAGAAGTTTGGGAAGCTGGGGAGGGGTGAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: GLPNVSGRQSTVRAH*GRQKFGKLGRGEVG
Trigger: CCCCACTTCACCCCTCCCCAGCTTCCCAAACTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR GCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACTTCCGCCCTCTCCCTaGCCAATTCTCTCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRLPPSP*PILSAW
Trigger: CCAGGCTGAGAGAATTGGGCAGGGAGAGGGCGGAAG...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGACCCTGACCCTTGGCTaGGTCCACTCTGCAGACTCC +
Preference number: 2 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKTLTLG*VHSADS
Trigger: GGAGTCTGCAGAGTGGACCCAGCCAAGGGTCAGGGT...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGGCTGACCCTGACCCTTaGCTGGGTCCACTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKADPDP*LGPLCR
Trigger: TCTGCAGAGTGGACCCAGCCAAGGGTCAGGGTCAGC...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCGGCTCAAGGTTGGGATaGGAAGGGGTCCCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRGSRLG*EGVPAP
Trigger: GGGGGCTGGGACCCCTTCCCATCCCAACCTTGAGCC...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR TCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTCTCGGTGCCCAGGCCTaGACTGAGCCCGGCCGGGTG +
Preference number: 2 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGLGAQA*TEPGRV
Trigger: CACCCGGCCGGGCTCAGTTCAGGCCTGGGCACCGAG...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR TCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGGAAGATTGGAGTCGCTaGCCCAGTGCTGACCCTGAC +
Preference number: 2 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKEDWSR*PSADPD
Trigger: GTCAGGGTCAGCACTGGGTCAGCGACTCCAATCTTC...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR GCA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGGGGCTCCAGGTATGGTaGGGTGGAAGATGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQGLQVW*GGRCRK
Trigger: CTTCCTGCATCTTCCACCGCACCATACCTGGAGCCC...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR GCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCTCGAGGCTTGCAAGGTaGCTGCGCCACCCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRSRLAR*LRHPWV
Trigger: AACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGA...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGCCAGGTATGGTGCGGTaGAAGATGCAGGAAGCCCGT +
Preference number: 2 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKPGMVR*KMQEAR
Trigger: ACGGGCTTCCTGCATCTTCCACCGCACCATACCTGG...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCGTGTCTAGGGTGTGCTaGCCACTGGAAGATTGGAGT +
Preference number: 2 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALVSRVC*PLEDWS
Trigger: ACTCCAATCTTCCAGTGGCCAGCACACCCTAGACAC...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR TCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATTGCCCAGGCCTGAACTaGGCCCGGCCGGGTGCAAGG +
Preference number: 2 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDCPGLN*ARPGAR
Trigger: CCTTGCACCCGGCCGGGCTCAGTTCAGGCCTGGGCA...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR CCA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGCCGACCGGAGTCAGCTaGGATCACGTTAATGACTCC +
Preference number: 2 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQPTGVS*DHVNDS
Trigger: GGAGTCATTAACGTGATCCCAGCTGACTCCGGTCGG...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGCCGACCGGAGTCAGCTaGGATCACGTTAATGACTCC +
Preference number: 2 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQPTGVS*DHVNDS
Trigger: GGAGTCATTAACGTGATCCCAGCTGACTCCGGTCGG...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR CAA 90 bp GGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATaGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGGG +
Preference number: 2 (lower is better)
Translates to: GNWLLSSNQIGSVPR*GVGAVSPGAQGWDG
Trigger: CCCATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR TCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATGTGGCCTGTTTCCCCTaGCACCCCTCGGAGGGCTCC +
Preference number: 2 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDVACFP*HPSEGS
Trigger: GGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCAC...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR CCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTCCGCGTGGGTCAGGCTaGATGGGTGAGGAGGTGCGG +
Preference number: 2 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGPRGSG*MGEEVR
Trigger: CCGCACCTCCTCACCCATCCAGCCTGACCCACGCGG...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR TCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATGCCTCTTCCCAGGCCTaGGGGTGGCTACAGCTCGAG +
Preference number: 2 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDASSQA*GWLQLE
Trigger: CTCGAGCTGTAGCCACCCTCAGGCCTGGGAAGAGGC...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR CCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATGGCGGGCCATGGCTTTaGCGGTGGCCTGTTTCCCCT +
Preference number: 2 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDGGPWL*RWPVSP
Trigger: AGGGGAAACAGGCCACCGCCAAAGCCATGGCCCGCC...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR CCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGGCGGGCCATGGCTTTaGCGGTGGCCTGTTTCCCCT +
Preference number: 2 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGGGPWL*RWPVSP
Trigger: AGGGGAAACAGGCCACCGCCAAAGCCATGGCCCGCC...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATGGCTCAAGGTTGGGATaGGAAGGGGTCCCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDGSRLG*EGVPAP
Trigger: GGGGGCTGGGACCCCTTCCCATCCCAACCTTGAGCC...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR TCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCCTGTTGATCTGTTTCTaGTTCAACAGCATCTCTCTC +
Preference number: 2 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALLLICF*FNSISL
Trigger: GAGAGAGATGCTGTTGAATCAGAAACAGATCAACAG...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR TCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGCCGGGTGCAAGGGCTaGGGTGTGAGGTCGGCCCAG +
Preference number: 2 (lower is better)
Translates to: VVGNITASVALILWANGQAGCKG*GVRSAQ
Trigger: CTGGGCCGACCTCACACCTCAGCCCTTGCACCCGGC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR TCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGCCTCTTCCCAGGCCTaGGGGTGGCTACAGCTCGAG +
Preference number: 2 (lower is better)
Translates to: VVGNITASVALILWANGQASSQA*GWLQLE
Trigger: CTCGAGCTGTAGCCACCCTCAGGCCTGGGAAGAGGC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR CCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGTCTAGGGTGTGCTaGCCACTGGAAGATTGGAGT +
Preference number: 2 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGVSRVC*PLEDWS
Trigger: ACTCCAATCTTCCAGTGGCCAGCACACCCTAGACAC...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR TCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGGAGAAACTGGCTCCTaGCCACTCAGCCCTGGAGCT +
Preference number: 2 (lower is better)
Translates to: VVGNITASVALILWANGQGETGS*PLSPGA
Trigger: AGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR TCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGAAGATTGGAGTCGCTaGCCCAGTGCTGACCCTGAC +
Preference number: 2 (lower is better)
Translates to: VVGNITASVALILWANGQEDWSR*PSADPD
Trigger: GTCAGGGTCAGCACTGGGTCAGCGACTCCAATCTTC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR CCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGCGGTCAGAGCCCATTTaGGCAGACAGAAGTTTGGGA +
Preference number: 2 (lower is better)
Translates to: VVGNITASVALILWANGQRSEPI*ADRSLG
Trigger: TCCCAAACTTCTGTCTGCCCAAATGGGCTCTGACCG...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR CCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGTGGCTCTCTGGAAACTaGTTACTCTCTTCCAACCAG +
Preference number: 2 (lower is better)
Translates to: VVGNITASVALILWANGQWLSGN*LLSSNQ
Trigger: CTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCA...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR CCA 72 bp GCCTGGGCTCTCGGCGGCGGGCCATGGCTTTGGCGGTaGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCA +
Preference number: 3 (lower is better)
Translates to: AWALGGGPWLWR*PVSPDTPRRAP
Trigger: TGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCGCCAAAGCCATGGCCCGCCGCCGAGAGCCCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR TCA 72 bp CGGCGGGCCATGGCTTTGGCGGTGGCCTGTTTCCCCTaGCACCCCTCGGAGGGCTCCAGGTATGGTGCGGTG +
Preference number: 3 (lower is better)
Translates to: RRAMALAVACFP*HPSEGSRYGAV
Trigger: CACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCGCCAAAGCCATGGCCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR TCA 72 bp GGAGACCCACCCAGGGTGAAGCTCGGTGCCCAGGCCTaGACTGAGCCCGGCCGGGTGCAAGGGCTGAGGTGT +
Preference number: 3 (lower is better)
Translates to: GDPPRVKLGAQA*TEPGRVQGLRC
Trigger: ACACCTCAGCCCTTGCACCCGGCCGGGCTCAGTTCAGGCCTGGGCACCGAGCTTCACCCTGGGTGGGTCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR GCA 72 bp CCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATaGAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTC +
Preference number: 3 (lower is better)
Translates to: PLGGLQVWCGGR*RKPVGLFWARV
Trigger: GACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR GCA 72 bp CTGAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTaGGCCACCCCTGGGTTGAGGCCGACCGGAGTCAGC +
Preference number: 3 (lower is better)
Translates to: LRVATARGLQGA*ATPGLRPTGVS
Trigger: GCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR GCA 72 bp AGGCCTGAGGGTGGCTACAGCTCGAGGCTTGCAAGGTaGCTGCGCCACCCCTGGGTTGAGGCCGACCGGAGT +
Preference number: 3 (lower is better)
Translates to: RPEGGYSSRLAR*LRHPWVEADRS
Trigger: ACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTCAGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR TCA 72 bp ACTCTGCAGACTCCACCTGAGGAGACCCACCCAGGGTaGAGCTCGGTGCCCAGGCCTGAACTGAGCCCGGCC +
Preference number: 3 (lower is better)
Translates to: TLQTPPEETHPG*SSVPRPELSPA
Trigger: GGCCGGGCTCAGTTCAGGCCTGGGCACCGAGCTTCACCCTGGGTGGGTCTCCTCAGGTGGAGTCTGCAGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR CCA 72 bp TCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTaGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAG +
Preference number: 3 (lower is better)
Translates to: SRYGAVEDAGSP*GSSGPVSWGTQ
Trigger: CTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR CCA 72 bp CCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTaGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGC +
Preference number: 3 (lower is better)
Translates to: PDTPRRAPGMVR*KMQEARGALLG
Trigger: GCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR CCA 72 bp TACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTaGGTTGAGGCCGACCGGAGTCAGCTGGGATCACGT +
Preference number: 3 (lower is better)
Translates to: YSSRLARCLRHP*VEADRSQLGSR
Trigger: ACGTGATCCCAGCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CAA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGCGGCGGGCCATGGCTTaGGCGGTGGCCTGTTTCCCC +
Preference number: 3 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPRRAMA*AVACFP
Trigger: GGGGAAACAGGCCACCGCCAAAGCCATGGCCCGCCG...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CAA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACGGCGGGCCATGGCTTaGGCGGTGGCCTGTTTCCCC +
Preference number: 3 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRRRAMA*AVACFP
Trigger: GGGGAAACAGGCCACCGCCAAAGCCATGGCCCGCCG...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR TCA 72 bp CTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTaGGGCCGACCGGAGTCAGCTGGGATCACGTTAATG +
Preference number: 3 (lower is better)
Translates to: LEACKVPAPPLG*GRPESAGITLM
Trigger: CATTAACGTGATCCCAGCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR CCA 72 bp TGCGCCACCCCTGGGTTGAGGCCGACCGGAGTCAGCTaGGATCACGTTAATGACTCCAAGCGATCGCCAGCC +
Preference number: 3 (lower is better)
Translates to: CATPGLRPTGVS*DHVNDSKRSPA
Trigger: GGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CAA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGAGACCAAGGCCGGGTTTaGGGGCGGACAGGGGACTGC +
Preference number: 3 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRDQGRV*GRTGDC
Trigger: GCAGTCCCCTGTCCGCCCCAAAACCCGGCCTTGGTC...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CAA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGAGCTACAGCTCGAGGCTaGCAAGGTGCCTGCGCCACC +
Preference number: 3 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRATARG*QGACAT
Trigger: GGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGC...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CAA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCCTGGCCACTGGAAGATaGGAGTCGCTGACCCAGTGC +
Preference number: 3 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALLATGR*ESLTQC
Trigger: GCACTGGGTCAGCGACTCCAATCTTCCAGTGGCCAG...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR CAA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACTGGCCACTGGAAGATaGGAGTCGCTGACCCAGTGC +
Preference number: 3 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRLATGR*ESLTQC
Trigger: GCACTGGGTCAGCGACTCCAATCTTCCAGTGGCCAG...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CAA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGACCAAGGCCGGGTTTaGGGGCGGACAGGGGACTGC +
Preference number: 3 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGDQGRV*GRTGDC
Trigger: GCAGTCCCCTGTCCGCCCCAAAACCCGGCCTTGGTC...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR-3UTR CAA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGTGCGCCACCCCTGGGTaGAGGCCGACCGGAGTCAGC +
Preference number: 3 (lower is better)
Translates to: VVGNITASVALILWANGQCATPG*RPTGVS
Trigger: GCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGCA...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR-3UTR CAA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATGGGAGTGTCCCAAGATaGGGTGTGGGCGCGGTATCT +
Preference number: 3 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDGSVPR*GVGAVS
Trigger: AGATACCGCGCCCACACCCAATCTTGGGACACTCCC...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR CCA 72 bp CTCTTTCTCTCTCTCACTCTCTGGCTCTCTGGAAACTaGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCA +
Preference number: 3 (lower is better)
Translates to: LFLSLTLWLSGN*LLSSNQIGSVP
Trigger: TGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR CCA 72 bp TCTCACTCTCTTTCTCTCTCTCACTCTCTGGCTCTCTaGAAACTGGTTACTCTCTTCCAACCAGATAGGGAG +
Preference number: 3 (lower is better)
Translates to: SHSLSLSHSLAL*KLVTLFQPDRE
Trigger: CTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGAAAGAGAGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR GCA 72 bp TCCTCCTACAGTCGTTGGAAATATCACAGCTTCAGTTaGATTAATACTTTGGGCAAATGGACAGCTGCCCCT +
Preference number: 3 (lower is better)
Translates to: SSYSRWKYHSFS*INTLGKWTAAP
Trigger: AGGGGCAGCTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGACTGTAGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCTGCGCGCGCTCAGGCTaGACCACAGCCCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLACARSG*TTARPR
Trigger: CCGAGGCCGGGCTGTGGTCCAGCCTGAGCGCGCGCA...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCGGATCTTCTCGTCCGTaGCCAGCGGCGGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAGSSRP*PAAAAP
Trigger: CGGAGCGGCCGCCGCTGGCCACGGACGAGAAGATCC...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCCCACGCCGTCGTCGGTaGCCTTGGAGCAGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAPRRRR*PWSSPR
Trigger: TCTCGGGCTGCTCCAAGGTCACCGACGACGGCGTGG...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCGAGACCCACCCAGGGTaGAGCTCGGTGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAETHPG*SSVPRP
Trigger: AGGCCTGGGCACCGAGCTTCACCCTGGGTGGGTCTC...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCGGGCGGACAGGGGACTaGCCCACACAGCGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAGRTGD*PTQRQG
Trigger: TCCTTGCCGCTGTGTGGGGCAGTCCCCTGTCCGCCC...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCGCAGCAGCTGCGAGATaGCCGCGATGGCGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAAAAAR*PRWRRR
Trigger: CCGACGACGCCATCGCGGCCATCTCGCAGCTGCTGC...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CATGCACAAAGTCCCCGAGTGTGCGTGCGTGCGTGGGGCGGGCCCACCCGCCGCCCCGTGGGGCTCTTCTaGGCCCGTGTCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: HAQSPRVCVRAWGGPTRRPVGLF*ARVLGD
Trigger: GTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGG...GCGGCGGGTGGGCCCGCCCCACGCACGCACGCACACTCGGGGACTTTGTGCATG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCCATGCAGCACCGGCGTaGGGCCTGCCCAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAHAAPA*GLPRTW
Trigger: CCAAGTTCTGGGCAGGCCTCACGCCGGTGCTGCATG...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCACAGCCCGGCCTCGGTaGAGTCGTTGCAGCCCGACA +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLATARPR*SRCSPT
Trigger: TGTCGGGCTGCAACGACTTCACCGAGGCCGGGCTGT...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCGTGGGTCAGGCTGGATaGGTGAGGAGGTGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAVGQAG*VRRCGW
Trigger: CCACCCGCACCTCCTCACCCATCCAGCCTGACCCAC...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CATGCACAAAGTCCCCGAGTGTGCGTGCGTGCGTGGGGCGGGCCCACCCGCCGCTGCCTGCGCCACCCCTaGGTTGAGGCCGACCGGAGT +
Preference number: 4 (lower is better)
Translates to: HAQSPRVCVRAWGGPTRRCLRHP*VEADRS
Trigger: ACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCA...GCGGCGGGTGGGCCCGCCCCACGCACGCACGCACACTCGGGGACTTTGTGCATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CATGCACAAAGTCCCCGAGTGTGCGTGCGTGCGTGGGGCGGGCCCACCCGCCGCCCAGCGCCATGTCGGTaGTGCGTGGGCACCACGAGA +
Preference number: 4 (lower is better)
Translates to: HAQSPRVCVRAWGGPTRRPAPCR*CVGTTR
Trigger: TCTCGTGGTGCCCACGCATCACCGACATGGCGCTGG...GCGGCGGGTGGGCCCGCCCCACGCACGCACGCACACTCGGGGACTTTGTGCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGCGGGCTCCTGGCTCATaGCACGCTGTCCGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGRAPGS*HAVRRA
Trigger: CGCCCGGCGGACAGCGTGGCATGAGCCAGGAGCCCG...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGCGGGCTCCTGGCTCATaGCACGCTGTCCGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWRAPGS*HAVRRA
Trigger: CGCCCGGCGGACAGCGTGGCATGAGCCAGGAGCCCG...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGGTCCCCGAGTGTGCGTaGGTGCGTGGGGCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWVPECA*VRGAGP
Trigger: TGGGCCCGCCCCACGCACGCACGCACACTCGGGGAC...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCTGGTGCGGTGGAAGATaGAGGAAGCCCGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAWCGGR*RKPVGL
Trigger: GAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCA...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CATGCACAAAGTCCCCGAGTGTGCGTGCGTGCGTGGGGCGGGCCCACCCGCCGCGCAAGCATGGAGGCTTaGGGTCGCCGTCGATGCCCG +
Preference number: 4 (lower is better)
Translates to: HAQSPRVCVRAWGGPTRRASMEA*GRRRCP
Trigger: CGGGCATCGACGGCGACCCCAAGCCTCCATGCTTGC...GCGGCGGGTGGGCCCGCCCCACGCACGCACGCACACTCGGGGACTTTGTGCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACCTCGGTGCCCAGGCCTaGACTGAGCCCGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADLGAQA*TEPGRV
Trigger: CACCCGGCCGGGCTCAGTTCAGGCCTGGGCACCGAG...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAGCAGGCGCAGCGTGTaGGTGCTGTGGCCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWSRRSV*VLWPWR
Trigger: GCGCCAGGGCCACAGCACGCACACGCTGCGCCTGCT...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGCCCCCTCAATCCCACTaGGCCCTGCCCGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGPPQSH*ALPGMG
Trigger: CCCCATCCCGGGCAGGGCCCAGTGGGATTGAGGGGG...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCGGAGGGCTCCAGGTATaGTGCGGTGGAAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAGGLQV*CGGRCR
Trigger: CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CATGCACAAAGTCCCCGAGTGTGCGTGCGTGCGTGGGGCGGGCCCACCCGCCGCGGGCGCGGTATCTCCTaGGGCTCAAGGTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: HAQSPRVCVRAWGGPTRRGRGIS*GSRLGW
Trigger: CCATCCCAACCTTGAGCCCCAGGAGATACCGCGCCC...GCGGCGGGTGGGCCCGCCCCACGCACGCACGCACACTCGGGGACTTTGTGCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGCTGGCGTGCCCTTGGTaGTGCTGGCCGCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVELACPW*CWPHPG
Trigger: GCCTGGGTGCGGCCAGCATCACCAAGGGCACGCCAG...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp AAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAGCTCACGCTCAGCGAGGTaGTGCGCGCGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KMQEARGALLGPCPGGPSSRSAR*CARSGW
Trigger: CCAGCCTGAGCGCGCGCATCACCTCGCTGAGCGTGA...GCTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGCCACGCCGTCGTCGGTaGCCTTGGAGCAGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWPRRRR*PWSSPR
Trigger: TCTCGGGCTGCTCCAAGGTCACCGACGACGGCGTGG...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGGTGGCCTGTTTCCCCTaGCACCCCTCGGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWVACFP*HPSEGS
Trigger: GGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCAC...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGGCCGGGTGCAAGGGCTaGGGTGTGAGGTCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVEAGCKG*GVRSAQ
Trigger: CTGGGCCGACCTCACACCTCAGCCCTTGCACCCGGC...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACGGCCGCTCCGCTGGGTaGCCAGGTGCCAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADGRSAG*PGAKAE
Trigger: CTCAGCCTTGGCACCTGGGCACCCAGCGGAGCGGCC...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCACGAGAGGTCAAGGCTaGGCAGCTTGCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLATRGQG*AACAGS
Trigger: AGAACCTGCGCAAGCTGCGCAGCCTTGACCTCTCGT...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCGTCCCCGAGTGTGCGTaGGTGCGTGGGGCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFVPECA*VRGAGP
Trigger: TGGGCCCGCCCCACGCACGCACGCACACTCGGGGAC...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CATGCACAAAGTCCCCGAGTGTGCGTGCGTGCGTGGGGCGGGCCCACCCGCCGCCTTCCGCCCTCTCCCTaGCCAATTCTCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: HAQSPRVCVRAWGGPTRRLPPSP*PILSAW
Trigger: CCAGGCTGAGAGAATTGGGCAGGGAGAGGGCGGAAG...GCGGCGGGTGGGCCCGCCCCACGCACGCACGCACACTCGGGGACTTTGTGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACCTCGGCCCGGGCTCCTaGCTCATGCCACGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADLGPGS*LMPRCP
Trigger: CGGACAGCGTGGCATGAGCCAGGAGCCCGGGCCGAG...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACCCGCACCCAGGCCGTTaGGCTGGCCCGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADPHPGR*AGPAAS
Trigger: TGAAGCTGCCGGGCCAGCCCAACGGCCTGGGTGCGG...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGAGCGTGTGCGTGCTGTaGCCCTGGCGCGCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGSVCVL*PWRAVK
Trigger: CTTCACGGCGCGCCAGGGCCACAGCACGCACACGCT...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCCATGTCGGTGATGCGTaGGCACCACGAGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAHVGDA*APREVK
Trigger: CTTGACCTCTCGTGGTGCCCACGCATCACCGACATG...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGCCCCCTCAATCCCACTaGGCCCTGCCCGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVEPPQSH*ALPGMG
Trigger: CCCCATCCCGGGCAGGGCCCAGTGGGATTGAGGGGG...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACCCCGTGGGGCTCTTCTaGGCCCGTGTCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADPVGLF*ARVLGD
Trigger: GTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGG...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCGGGTGTGCTGGCCACTaGAAGATTGGAGTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAGCAGH*KIGVAD
Trigger: GTCAGCGACTCCAATCTTCCAGTGGCCAGCACACCC...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCGGAGTGTCCCAAGATTaGGTGTGGGCGCGGTATCTC +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAGVSQD*VWARYL
Trigger: GAGATACCGCGCCCACACCCAATCTTGGGACACTCC...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGCATGCAGCACCGGCGTaGGGCCTGCCCAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWHAAPA*GLPRTW
Trigger: CCAAGTTCTGGGCAGGCCTCACGCCGGTGCTGCATG...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp AAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAGCCCAGCGCCATGTCGGTaGTGCGTGGGCACCACGAGA +
Preference number: 4 (lower is better)
Translates to: KMQEARGALLGPCPGGPSPAPCR*CVGTTR
Trigger: TCTCGTGGTGCCCACGCATCACCGACATGGCGCTGG...GCTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGCCCAGGCCTGAACTaGGCCCGGCCGGGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFCPGLN*ARPGAR
Trigger: CCTTGCACCCGGCCGGGCTCAGTTCAGGCCTGGGCA...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp AAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAGCTGGGGTCGCCGTCGATaGCCGGGCTCGACATCTTCC +
Preference number: 4 (lower is better)
Translates to: KMQEARGALLGPCPGGPSWGRRR*PGSTSS
Trigger: GGAAGATGTCGAGCCCGGGCATCGACGGCGACCCCA...GCTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGAGGTTGGGCAGCAGCTaGGAGATGGCCGCGATGGCG +
Preference number: 4 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGRLGSS*EMAAMA
Trigger: CGCCATCGCGGCCATCTCGCAGCTGCTGCCCAACCT...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGGAGCAGCGGGCAGCCTaGCAGAGACAGGAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWEQRAA*QRQEAQ
Trigger: TTGCGCCTCCTGTCTCTGGCAGGCTGCCCGCTGCTC...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACTCCAGCTCCTGCAGCTaGACCAGGCCCGACAGCCCG +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADSSSCS*TRPDSP
Trigger: CGGGCTGTCGGGCCTGGTGCAGCTGCAGGAGCTGGA...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGGTCCCCGAGTGTGCGTaGGTGCGTGGGGCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRVPECA*VRGAGP
Trigger: TGGGCCCGCCCCACGCACGCACGCACACTCGGGGAC...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGGGGCGGACAGGGGACTaGCCCACACAGCGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVEGRTGD*PTQRQG
Trigger: TCCTTGCCGCTGTGTGGGGCAGTCCCCTGTCCGCCC...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAATGCGCGCGCTCAGGCTaGACCACAGCCCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQECARSG*TTARPR
Trigger: CCGAGGCCGGGCTGTGGTCCAGCCTGAGCGCGCGCA...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CATGCACAAAGTCCCCGAGTGTGCGTGCGTGCGTGGGGCGGGCCCACCCGCCGCACGTTGACCACGCCGTaGTTGGTGATCTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: HAQSPRVCVRAWGGPTRRTLTTP*LVISQQ
Trigger: CTGCTGGGAGATCACCAACCACGGCGTGGTCAACGT...GCGGCGGGTGGGCCCGCCCCACGCACGCACGCACACTCGGGGACTTTGTGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACTCTGGGCCCGTGTCCTaGGGGACCCAGCCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADSGPVS*GTQPPQ
Trigger: TTGAGGGGGCTGGGTCCCCCAGGACACGGGCCCAGA...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGTCTGGGCCCGTGTCCTaGGGGACCCAGCCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVESGPVS*GTQPPQ
Trigger: TTGAGGGGGCTGGGTCCCCCAGGACACGGGCCCAGA...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp AAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAGCGGCGGGCCATGGCTTTaGCGGTGGCCTGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: KMQEARGALLGPCPGGPSGGPWL*RWPVSP
Trigger: AGGGGAAACAGGCCACCGCCAAAGCCATGGCCCGCC...GCTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CATGCACAAAGTCCCCGAGTGTGCGTGCGTGCGTGGGGCGGGCCCACCCGCCGCGGGTGTGCTGGCCACTaGAAGATTGGAGTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: HAQSPRVCVRAWGGPTRRGCAGH*KIGVAD
Trigger: GTCAGCGACTCCAATCTTCCAGTGGCCAGCACACCC...GCGGCGGGTGGGCCCGCCCCACGCACGCACGCACACTCGGGGACTTTGTGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CATGCACAAAGTCCCCGAGTGTGCGTGCGTGCGTGGGGCGGGCCCACCCGCCGCGGAGTGTCCCAAGATTaGGTGTGGGCGCGGTATCTC +
Preference number: 4 (lower is better)
Translates to: HAQSPRVCVRAWGGPTRRGVSQD*VWARYL
Trigger: GAGATACCGCGCCCACACCCAATCTTGGGACACTCC...GCGGCGGGTGGGCCCGCCCCACGCACGCACGCACACTCGGGGACTTTGTGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
3UTR CAA 72 bp CTCTTCCCAGGCCTGAGGGTGGCTACAGCTCGAGGCTaGCAAGGTGCCTGCGCCACCCCTGGGTTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: LFPGLRVATARG*QGACATPGLRP
Trigger: CGGCCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTCAGGCCTGGGAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACACAGCCCGGCCTCGGTaGAGTCGTTGCAGCCCGACA +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADTARPR*SRCSPT
Trigger: TGTCGGGCTGCAACGACTTCACCGAGGCCGGGCTGT...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGGGCCCTGGCGCGCCGTaGAGTAGGCCAGCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMGPGAP*SRPAPC
Trigger: ACACGGCGCTGGCCTACTTCACGGCGCGCCAGGGCC...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGTCTGCAGACTCCACCTaGGGAGACCCACCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGSADST*GDPPRV
Trigger: CACCCTGGGTGGGTCTCCTCAGGTGGAGTCTGCAGA...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGTGGGGTCGCCGTCGATaGCCGGGCTCGACATCTTCC +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVEWGRRR*PGSTSS
Trigger: GGAAGATGTCGAGCCCGGGCATCGACGGCGACCCCA...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp AAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAGCAGGTTGGGCAGGCTGTaGACCACGTTGACCACGCCG +
Preference number: 4 (lower is better)
Translates to: KMQEARGALLGPCPGGPSRLGRL*TTLTTP
Trigger: CGGCGTGGTCAACGTGGTGCACAGCCTGCCCAACCT...GCTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAGCTCCTCTAGGCGGTaGAGGTCGCAGGCCACGTAC +
Preference number: 4 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWSSSRR*RSQATY
Trigger: GTACGTGGCCTGCGACCTGCACCGCCTAGAGGAGCT...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGAGCTCCTCTAGGCGGTaGAGGTCGCAGGCCACGTAC +
Preference number: 4 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGSSSRR*RSQATY
Trigger: GTACGTGGCCTGCGACCTGCACCGCCTAGAGGAGCT...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACGAGCAGCGGGCAGCCTaGCAGAGACAGGAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADEQRAA*QRQEAQ
Trigger: TTGCGCCTCCTGTCTCTGGCAGGCTGCCCGCTGCTC...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CATGCACAAAGTCCCCGAGTGTGCGTGCGTGCGTGGGGCGGGCCCACCCGCCGCAGGCAGCGGGGCAGGTaGTGCGAGAAATACTTGAAG +
Preference number: 4 (lower is better)
Translates to: HAQSPRVCVRAWGGPTRRRQRGR*CEKYLK
Trigger: CTTCAAGTATTTCTCGCAGCACCTGCCCCGCTGCCT...GCGGCGGGTGGGCCCGCCCCACGCACGCACGCACACTCGGGGACTTTGTGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACGGCTTGCAAGGTGCCTaGGCCACCCCTGGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADGLQGA*ATPGLR
Trigger: CCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCC...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGTCGAGGCTTGCAAGGTaGCTGCGCCACCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGSRLAR*LRHPWV
Trigger: AACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGA...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAACCGCACCCAGGCCGTTaGGCTGGCCCGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQEPHPGR*AGPAAS
Trigger: TGAAGCTGCCGGGCCAGCCCAACGGCCTGGGTGCGG...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGTCAGCTCCGCCAGGTTaGGCAGCAGCTGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWSAPPG*AAAARW
Trigger: CCATCTCGCAGCTGCTGCCCAACCTGGCGGAGCTGA...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCCCGCGTGGGTCAGGCTaGATGGGTGAGGAGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFPRGSG*MGEEVR
Trigger: CCGCACCTCCTCACCCATCCAGCCTGACCCACGCGG...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCGTGTCTAGGGTGTGCTaGCCACTGGAAGATTGGAGT +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAVSRVC*PLEDWS
Trigger: ACTCCAATCTTCCAGTGGCCAGCACACCCTAGACAC...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGCTGACCACTCAGCCCTaGAGCTTCCTGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGLTTQP*SFLGLA
Trigger: TGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAG...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCAATACTTTGGGCAAATaGACAGCTGCCCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLANTLGK*TAAPPH
Trigger: GTGGGGAGGGGCAGCTGTCCATTTGCCCAAAGTATT...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGTTGCAGGAGAAGGGGTaGAGCCCGCAGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWLQEKG*SPQGGS
Trigger: GCTTCCTCCCTGCGGGCTCCACCCCTTCTCCTGCAA...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562563.1
CDS-3UTR TCA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGGGCCCTGGCGCGCCGTaGAGTAGGCCAGCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQGPGAP*SRPAPC
Trigger: ACACGGCGCTGGCCTACTTCACGGCGCGCCAGGGCC...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCCCTCGCGCTACTCAATaGCGAGGCAGCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFPRATQ*RGSGAG
Trigger: ACCTGCCCCGCTGCCTCGTCATTGAGTAGCGCGAGG...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCGTGGCCTGTTTCCCCTaGCACCCCTCGGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALVACFP*HPSEGS
Trigger: GGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCAC...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGCTCGGTGCCCAGGCCTaGACTGAGCCCGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQLGAQA*TEPGRV
Trigger: CACCCGGCCGGGCTCAGTTCAGGCCTGGGCACCGAG...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCAGGTTGGGCAGCAGCTaGGAGATGGCCGCGATGGCG +
Preference number: 4 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFRLGSS*EMAAMA
Trigger: CGCCATCGCGGCCATCTCGCAGCTGCTGCCCAACCT...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACAGGTTGGGCAGGCTGTaGACCACGTTGACCACGCCG +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADRLGRL*TTLTTP
Trigger: CGGCGTGGTCAACGTGGTGCACAGCCTGCCCAACCT...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGAGCTCCTCTAGGCGGTaGAGGTCGCAGGCCACGTAC +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVESSSRR*RSQATY
Trigger: GTACGTGGCCTGCGACCTGCACCGCCTAGAGGAGCT...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCCAAAGTCCCCGAGTGTaGGTGCGTGCGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALQSPRV*VRAWGG
Trigger: CCCGCCCCACGCACGCACGCACACTCGGGGACTTTG...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAACAAAGTCCCCGAGTGTaGGTGCGTGCGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQEQSPRV*VRAWGG
Trigger: CCCGCCCCACGCACGCACGCACACTCGGGGACTTTG...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCAAAGGAGCTCCCCGGTaGGAGAGGATCGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALKGAPR*ERIGRP
Trigger: GGGGCGGCCGATCCTCTCCCACCGGGGAGCTCCTTT...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCGGCCTGCCCAGAACTTaGGCTGGTACAGCACGCGCC +
Preference number: 4 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFGLPRT*AGTARA
Trigger: GGCGCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCC...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAAGCGTGTGCGTGCTGTaGCCCTGGCGCGCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQESVCVL*PWRAVK
Trigger: CTTCACGGCGCGCCAGGGCCACAGCACGCACACGCT...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCGTGGGTCAGGCTGGATaGGTGAGGAGGTGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFVGQAG*VRRCGW
Trigger: CCACCCGCACCTCCTCACCCATCCAGCCTGACCCAC...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGTGCCTGCGCCACCCCTaGGTTGAGGCCGACCGGAGT +
Preference number: 4 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRCLRHP*VEADRS
Trigger: ACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCA...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGTCCCAAGATTGGGTGTaGGCGCGGTATCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGSQDWV*ARYLLG
Trigger: CCCCAGGAGATACCGCGCCCACACCCAATCTTGGGA...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACTGGCGTGCCCTTGGTaGTGCTGGCCGCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRLACPW*CWPHPG
Trigger: GCCTGGGTGCGGCCAGCATCACCAAGGGCACGCCAG...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGCCCAGGTGCCAAGGCTaGGGCTGGTCCACCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQPRCQG*GWSTCR
Trigger: CCGGCAGGTGGACCAGCCTCAGCCTTGGCACCTGGG...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACCGTCGTCGGCCACGTTaGTGCAGTCACTCACGCTCA +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADRRRPR*CSHSRS
Trigger: TGAGCGTGAGTGACTGCATCAACGTGGCCGACGACG...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACGCTGCGAGAAATACTTaGAGAGCTCGGGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADAARNT*RARGWP
Trigger: GGGCCACCCCCGAGCTCTTCAAGTATTTCTCGCAGC...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGGCCTCTTCCCAGGCCTaGGGGTGGCTACAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRASSQA*GWLQLE
Trigger: CTCGAGCTGTAGCCACCCTCAGGCCTGGGAAGAGGC...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGTGCCCAGGCCTGAACTaGGCCCGGCCGGGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPCPGLN*ARPGAR
Trigger: CCTTGCACCCGGCCGGGCTCAGTTCAGGCCTGGGCA...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGTGCCCAGGCCTGAACTaGGCCCGGCCGGGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKCPGLN*ARPGAR
Trigger: CCTTGCACCCGGCCGGGCTCAGTTCAGGCCTGGGCA...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGAAGATTGGAGTCGCTaGCCCAGTGCTGACCCTGAC +
Preference number: 4 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGEDWSR*PSADPD
Trigger: GTCAGGGTCAGCACTGGGTCAGCGACTCCAATCTTC...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGGGAGAAACTGGCTCCTaGCCACTCAGCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVEGETGS*PLSPGA
Trigger: AGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCC...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACGGAGAAACTGGCTCCTaGCCACTCAGCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADGETGS*PLSPGA
Trigger: AGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCC...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGAGCAGGCGCAGCGTGTaGGTGCTGTGGCCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPSRRSV*VLWPWR
Trigger: GCGCCAGGGCCACAGCACGCACACGCTGCGCCTGCT...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGACGAGAGGTCAAGGCTaGGCAGCTTGCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWTRGQG*AACAGS
Trigger: AGAACCTGCGCAAGCTGCGCAGCCTTGACCTCTCGT...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGAGCAGCGGGCAGCCTaGCAGAGACAGGAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQEEQRAA*QRQEAQ
Trigger: TTGCGCCTCCTGTCTCTGGCAGGCTGCCCGCTGCTC...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGTCCAGCTCCTGCAGCTaGACCAGGCCCGACAGCCCG +
Preference number: 4 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMSSSCS*TRPDSP
Trigger: CGGGCTGTCGGGCCTGGTGCAGCTGCAGGAGCTGGA...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGGAGGGCGGCGTGCAGTaGGGGCACGAGGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQEGGVQ*GHEGHA
Trigger: TGCATGCCCCTCGTGCCCGCACTGCACGCCGCCCTC...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGAGAGGGCGGCGTGCAGTaGGGGCACGAGGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGREGGVQ*GHEGHA
Trigger: TGCATGCCCCTCGTGCCCGCACTGCACGCCGCCCTC...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGTGCGGTGGAAGATaGAGGAAGCCCGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFWCGGR*RKPVGL
Trigger: GAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCA...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGGGGCTCCAGGTATGGTaGGGTGGAAGATGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWGLQVW*GGRCRK
Trigger: CTTCCTGCATCTTCCACCGCACCATACCTGGAGCCC...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGGCTTGCAAGGTGCCTaGGCCACCCCTGGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQEGLQGA*ATPGLR
Trigger: CCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCC...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCGCCGGGTCAGGATTaGAGGAGAAGGGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQEAPGQD*RRRGGA
Trigger: GGCTCCACCCCTTCTCCTGCAATCCTGACCCGGCGC...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562563.1
CDS-3UTR CCA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGCTCGGCCCGGGCTCCTaGCTCATGCCACGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQLGPGS*LMPRCP
Trigger: CGGACAGCGTGGCATGAGCCAGGAGCCCGGGCCGAG...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGCCCCCTCAATCCCACTaGGCCCTGCCCGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKPPQSH*ALPGMG
Trigger: CCCCATCCCGGGCAGGGCCCAGTGGGATTGAGGGGG...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGCCAGGTATGGTGCGGTaGAAGATGCAGGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGPGMVR*KMQEAR
Trigger: ACGGGCTTCCTGCATCTTCCACCGCACCATACCTGG...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGGGCGGGCCATGGCTTTaGCGGTGGCCTGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRGGPWL*RWPVSP
Trigger: AGGGGAAACAGGCCACCGCCAAAGCCATGGCCCGCC...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGCTCGGCGGCGGGCCATaGCTTTGGCGGTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMLGGGP*LWRWPV
Trigger: AACAGGCCACCGCCAAAGCCATGGCCCGCCGCCGAG...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGCCGCGTGGGTCAGGCTaGATGGGTGAGGAGGTGCGG +
Preference number: 4 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMPRGSG*MGEEVR
Trigger: CCGCACCTCCTCACCCATCCAGCCTGACCCACGCGG...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGACCCTGACCCTTGGCTaGGTCCACTCTGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVETLTLG*VHSADS
Trigger: GGAGTCTGCAGAGTGGACCCAGCCAAGGGTCAGGGT...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGAGGGGCTGGAGAAACTaGCTCCTGACCACTCAGCCC +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVERGWRN*LLTTQP
Trigger: GGGCTGAGTGGTCAGGAGCCAGTTTCTCCAGCCCCT...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGAGGCGACCTCCCGTCATaGGGAGCCCGGCATGGGCGT +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRGDLPS*GARHGR
Trigger: ACGCCCATGCCGGGCTCCCCATGACGGGAGGTCGCC...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397621.6
3UTR CAA 72 bp GCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTaGAGGCCGACCGGAGTCAGCTGGGATCACGTTAAT +
Preference number: 4 (lower is better)
Translates to: ARGLQGACATPG*RPTGVSWDHVN
Trigger: ATTAACGTGATCCCAGCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGTCACGCTCAGCGAGGTaGTGCGCGCGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPSRSAR*CARSGW
Trigger: CCAGCCTGAGCGCGCGCATCACCTCGCTGAGCGTGA...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGCCTCGCGCTACTCAATaGCGAGGCAGCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMPRATQ*RGSGAG
Trigger: ACCTGCCCCGCTGCCTCGTCATTGAGTAGCGCGAGG...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGAGTGGCCTGTTTCCCCTaGCACCCCTCGGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRVACFP*HPSEGS
Trigger: GGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCAC...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGGAGACCCACCCAGGGTaGAGCTCGGTGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQETHPG*SSVPRP
Trigger: AGGCCTGGGCACCGAGCTTCACCCTGGGTGGGTCTC...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGGAGACCCACCCAGGGTaGAGCTCGGTGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKETHPG*SSVPRP
Trigger: AGGCCTGGGCACCGAGCTTCACCCTGGGTGGGTCTC...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACCTCCTCAGCAACAGCTaGGATTTGCCAGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADLLSNS*DLPASP
Trigger: GGGGGATGCTGGCAAATCTCAGCTGTTGCTGAGGAG...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGTCCAGCTCCTGCAGCTaGACCAGGCCCGACAGCCCG +
Preference number: 4 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPSSSCS*TRPDSP
Trigger: CGGGCTGTCGGGCCTGGTGCAGCTGCAGGAGCTGGA...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp AAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAGCAGGCAGCGGGGCAGGTaGTGCGAGAAATACTTGAAG +
Preference number: 4 (lower is better)
Translates to: KMQEARGALLGPCPGGPSRQRGR*CEKYLK
Trigger: CTTCAAGTATTTCTCGCAGCACCTGCCCCGCTGCCT...GCTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCTGGTGCGGTGGAAGATaGAGGAAGCCCGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALWCGGR*RKPVGL
Trigger: GAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCA...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCCTTCCGCCCTCTCCCTaGCCAATTCTCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFLPPSP*PILSAW
Trigger: CCAGGCTGAGAGAATTGGGCAGGGAGAGGGCGGAAG...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAATCGAGGCTTGCAAGGTaGCTGCGCCACCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQESRLAR*LRHPWV
Trigger: AACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGA...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACTGGCTGGGTCCACTCTaGAGACTCCACCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADWLGPL*RLHLRR
Trigger: TCTCCTCAGGTGGAGTCTGCAGAGTGGACCCAGCCA...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACCCAGGCCGTTGGGCTaGCCCGGCAGCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRPRPLG*PGSFTR
Trigger: TCTGGTGAAGCTGCCGGGCCAGCCCAACGGCCTGGG...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAATCAGCTCCGCCAGGTTaGGCAGCAGCTGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQESAPPG*AAAARW
Trigger: CCATCTCGCAGCTGCTGCCCAACCTGGCGGAGCTGA...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGAGCGTGTGCGTGCTGTaGCCCTGGCGCGCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKSVCVL*PWRAVK
Trigger: CTTCACGGCGCGCCAGGGCCACAGCACGCACACGCT...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGACGTTGACCACGCCGTaGTTGGTGATCTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVETLTTP*LVISQQ
Trigger: CTGCTGGGAGATCACCAACCACGGCGTGGTCAACGT...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGCATGTCGGTGATGCGTaGGCACCACGAGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVEHVGDA*APREVK
Trigger: CTTGACCTCTCGTGGTGCCCACGCATCACCGACATG...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACCCAGGTATGGTGCGGTaGAAGATGCAGGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADPGMVR*KMQEAR
Trigger: ACGGGCTTCCTGCATCTTCCACCGCACCATACCTGG...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACTCGGCGGCGGGCCATaGCTTTGGCGGTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRLGGGP*LWRWPV
Trigger: AACAGGCCACCGCCAAAGCCATGGCCCGCCGCCGAG...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGACCAAGGCCGGGTTTTaGGGCGGACAGGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMTKAGF*GGQGTA
Trigger: GGCAGTCCCCTGTCCGCCCCAAAACCCGGCCTTGGT...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGCCAATTCTCTCAGCCTaGCCAGGGACCAAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRPILSA*PGTKAG
Trigger: CCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGG...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGCCGACCGGAGTCAGCTaGGATCACGTTAATGACTCC +
Preference number: 4 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGPTGVS*DHVNDS
Trigger: GGAGTCATTAACGTGATCCCAGCTGACTCCGGTCGG...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGGGCTCAAGGTTGGGATaGGAAGGGGTCCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMGSRLG*EGVPAP
Trigger: GGGGGCTGGGACCCCTTCCCATCCCAACCTTGAGCC...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGGGCGCGGTATCTCCTaGGGCTCAAGGTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQEGRGIS*GSRLGW
Trigger: CCATCCCAACCTTGAGCCCCAGGAGATACCGCGCCC...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGCTGACCACTCAGCCCTaGAGCTTCCTGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRLTTQP*SFLGLA
Trigger: TGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAG...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACACCAGAAGAGCCCATTaGGGATCTTCTCGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADTRRAH*GSSRPW
Trigger: CCACGGACGAGAAGATCCTCAATGGGCTCTTCTGGT...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAACGTCGTCGGCCACGTTaGTGCAGTCACTCACGCTCA +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQERRRPR*CSHSRS
Trigger: TGAGCGTGAGTGACTGCATCAACGTGGCCGACGACG...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGCCAGCGCCATGTCGGTaGTGCGTGGGCACCACGAGA +
Preference number: 4 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQPAPCR*CVGTTR
Trigger: TCTCGTGGTGCCCACGCATCACCGACATGGCGCTGG...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGGCCTCTTCCCAGGCCTaGGGGTGGCTACAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQASSQA*GWLQLE
Trigger: CTCGAGCTGTAGCCACCCTCAGGCCTGGGAAGAGGC...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCCTCCTCAGCAACAGCTaGGATTTGCCAGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFLLSNS*DLPASP
Trigger: GGGGGATGCTGGCAAATCTCAGCTGTTGCTGAGGAG...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCAGCAGGCGCAGCGTGTaGGTGCTGTGGCCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRSRRSV*VLWPWR
Trigger: GCGCCAGGGCCACAGCACGCACACGCTGCGCCTGCT...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGCAAGGCTGCGCAGCTTaGGCAGGTTCTCGGCCACGA +
Preference number: 4 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMQGCAA*AGSRPR
Trigger: TCGTGGCCGAGAACCTGCGCAAGCTGCGCAGCCTTG...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCACGAGAGGTCAAGGCTaGGCAGCTTGCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFTRGQG*AACAGS
Trigger: AGAACCTGCGCAAGCTGCGCAGCCTTGACCTCTCGT...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGCCCAGGGCCAGGAGGTaGTTCAGCCCGAAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMPRARR*FSPKSC
Trigger: GCAAGACTTCGGGCTGAAGCACCTCCTGGCCCTGGG...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGGGCTTGCAAGGTGCCTaGGCCACCCCTGGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQGLQGA*ATPGLR
Trigger: CCTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCC...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGTGTTCAAGCATAACCTaGAGGCGGGCGGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKCSSIT*RRAGAG
Trigger: CCCGGCGCCCGCCCGCCTGCAGGTTATGCTTGAACA...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562563.1
CDS-3UTR CCA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCGTTTCGAGGCAAGCATaGAGGCTTGGGGTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALVSRQA*RLGVAV
Trigger: GACGGCGACCCCAAGCCTCCATGCTTGCCTCGAAAC...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCGGATCTTCTCGTCCGTaGCCAGCGGCGGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRGSSRP*PAAAAP
Trigger: CGGAGCGGCCGCCGCTGGCCACGGACGAGAAGATCC...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAACAGGCCTTGCACACCTaGGCCAGCACACACTTCTCG +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQEQALHT*ASTHFS
Trigger: CGAGAAGTGTGTGCTGGCCCAGGTGTGCAAGGCCTG...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGGCCCAGAACTTGGGCTaGTACAGCACGCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQAQNLG*YSTRRQ
Trigger: CTGGCGGCGCGTGCTGTACCAGCCCAAGTTCTGGGC...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGGCCCAGAACTTGGGCTaGTACAGCACGCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKAQNLG*YSTRRQ
Trigger: CTGGCGGCGCGTGCTGTACCAGCCCAAGTTCTGGGC...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGGAGGGCTCCAGGTATaGTGCGGTGGAAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQEGGLQV*CGGRCR
Trigger: CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGGGCGGGCCATGGCTTTaGCGGTGGCCTGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKGGPWL*RWPVSP
Trigger: AGGGGAAACAGGCCACCGCCAAAGCCATGGCCCGCC...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp AAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAGCCGGTCAGAGCCCATTTaGGCAGACAGAAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: KMQEARGALLGPCPGGPSRSEPI*ADRSLG
Trigger: TCCCAAACTTCTGTCTGCCCAAATGGGCTCTGACCG...GCTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGCGGTCAGAGCCCATTTaGGCAGACAGAAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGRSEPI*ADRSLG
Trigger: TCCCAAACTTCTGTCTGCCCAAATGGGCTCTGACCG...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGGGCTCAAGGTTGGGATaGGAAGGGGTCCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQGSRLG*EGVPAP
Trigger: GGGGGCTGGGACCCCTTCCCATCCCAACCTTGAGCC...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGGGCTCAAGGTTGGGATaGGAAGGGGTCCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPGSRLG*EGVPAP
Trigger: GGGGGCTGGGACCCCTTCCCATCCCAACCTTGAGCC...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCTCACGCTCAGCGAGGTaGTGCGCGCGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRSRSAR*CARSGW
Trigger: CCAGCCTGAGCGCGCGCATCACCTCGCTGAGCGTGA...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGTCTGCAGACTCCACCTaGGGAGACCCACCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQSADST*GDPPRV
Trigger: CACCCTGGGTGGGTCTCCTCAGGTGGAGTCTGCAGA...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGATCTGCAGACTCCACCTaGGGAGACCCACCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRSADST*GDPPRV
Trigger: CACCCTGGGTGGGTCTCCTCAGGTGGAGTCTGCAGA...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGCACCGGCGTGAGGCCTaGCCAGAACTTGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKHRREA*PELGLV
Trigger: TACCAGCCCAAGTTCTGGGCAGGCCTCACGCCGGTG...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGAGACGCACCACGCCCTaGATCTGTTCAAGCATAACC +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVERRTTP*ICSSIT
Trigger: GGTTATGCTTGAACAGATGCAGGGCGTGGTGCGTCT...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGAGGTTGGGCAGGCTGTaGACCACGTTGACCACGCCG +
Preference number: 4 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKRLGRL*TTLTTP
Trigger: CGGCGTGGTCAACGTGGTGCACAGCCTGCCCAACCT...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCCAGCGGGGCAGGTGCTaGGAGAAATACTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFQRGRC*EKYLKS
Trigger: GCTCTTCAAGTATTTCTCGCAGCACCTGCCCCGCTG...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGGGGCAAATGGACAGCTaGCCCTCCCCACTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMGQMDS*PSPLGV
Trigger: AACCCCTAGTGGGGAGGGGCAGCTGTCCATTTGCCC...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCGCAGCAGCTGCGAGATaGCCGCGATGGCGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRAAAAR*PRWRRR
Trigger: CCGACGACGCCATCGCGGCCATCTCGCAGCTGCTGC...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGTCAGCTCCGCCAGGTTaGGCAGCAGCTGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKSAPPG*AAAARW
Trigger: CCATCTCGCAGCTGCTGCCCAACCTGGCGGAGCTGA...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGACGTTGACCACGCCGTaGTTGGTGATCTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRTLTTP*LVISQQ
Trigger: CTGCTGGGAGATCACCAACCACGGCGTGGTCAACGT...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACCAATTCTCTCAGCCTaGCCAGGGACCAAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRPILSA*PGTKAG
Trigger: CCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGG...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGGCTGACCCTGACCCTTaGCTGGGTCCACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMADPDP*LGPLCR
Trigger: TCTGCAGAGTGGACCCAGCCAAGGGTCAGGGTCAGC...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGGGGTGTGCTGGCCACTaGAAGATTGGAGTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRGCAGH*KIGVAD
Trigger: GTCAGCGACTCCAATCTTCCAGTGGCCAGCACACCC...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGGGGCGCGGTATCTCCTaGGGCTCAAGGTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPGRGIS*GSRLGW
Trigger: CCATCCCAACCTTGAGCCCCAGGAGATACCGCGCCC...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGGGAGTGTCCCAAGATTaGGTGTGGGCGCGGTATCTC +
Preference number: 4 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRGVSQD*VWARYL
Trigger: GAGATACCGCGCCCACACCCAATCTTGGGACACTCC...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACAATACTTTGGGCAAATaGACAGCTGCCCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADNTLGK*TAAPPH
Trigger: GTGGGGAGGGGCAGCTGTCCATTTGCCCAAAGTATT...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACGTCGTCGGCCACGTTaGTGCAGTCACTCACGCTCA +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRRRRPR*CSHSRS
Trigger: TGAGCGTGAGTGACTGCATCAACGTGGCCGACGACG...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGGCTGCGAGAAATACTTaGAGAGCTCGGGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQAARNT*RARGWP
Trigger: GGGCCACCCCCGAGCTCTTCAAGTATTTCTCGCAGC...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCGCCTCTTCCCAGGCCTaGGGGTGGCTACAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRASSQA*GWLQLE
Trigger: CTCGAGCTGTAGCCACCCTCAGGCCTGGGAAGAGGC...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGCATAACCTCGAGGCCTaGGTCCGTGATGGTGGAGCG +
Preference number: 4 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQHNLEA*VRDGGA
Trigger: CGCTCCACCATCACGGACGCAGGCCTCGAGGTTATG...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACATAACCTCGAGGCCTaGGTCCGTGATGGTGGAGCG +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRHNLEA*VRDGGA
Trigger: CGCTCCACCATCACGGACGCAGGCCTCGAGGTTATG...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAACAGCGGGGCAGGTGCTaGGAGAAATACTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQEQRGRC*EKYLKS
Trigger: GCTCTTCAAGTATTTCTCGCAGCACCTGCCCCGCTG...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGGGGCAAATGGACAGCTaGCCCTCCCCACTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQGQMDS*PSPLGV
Trigger: AACCCCTAGTGGGGAGGGGCAGCTGTCCATTTGCCC...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGTCCCAAGATTGGGTGTaGGCGCGGTATCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQSQDWV*ARYLLG
Trigger: CCCCAGGAGATACCGCGCCCACACCCAATCTTGGGA...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp AAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAGCCTCTCTCTCACTCTCTaGCTCTCTGGAAACTGGTTA +
Preference number: 4 (lower is better)
Translates to: KMQEARGALLGPCPGGPSLSLTL*LSGNWL
Trigger: TAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAG...GCTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGAGGGGCTGGAGAAACTaGCTCCTGACCACTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKRGWRN*LLTTQP
Trigger: GGGCTGAGTGGTCAGGAGCCAGTTTCTCCAGCCCCT...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATGGCCCTGGCGCGCCGTaGAGTAGGCCAGCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDGPGAP*SRPAPC
Trigger: ACACGGCGCTGGCCTACTTCACGGCGCGCCAGGGCC...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGGAAGATTGGAGTCGCTaGCCCAGTGCTGACCCTGAC +
Preference number: 4 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPEDWSR*PSADPD
Trigger: GTCAGGGTCAGCACTGGGTCAGCGACTCCAATCTTC...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGCTCCTCAGCAACAGCTaGGATTTGCCAGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQLLSNS*DLPASP
Trigger: GGGGGATGCTGGCAAATCTCAGCTGTTGCTGAGGAG...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCCAAGGCTGCGCAGCTTaGGCAGGTTCTCGGCCACGA +
Preference number: 4 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRQGCAA*AGSRPR
Trigger: TCGTGGCCGAGAACCTGCGCAAGCTGCGCAGCCTTG...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGTGGCTGGGTCCACTCTaGAGACTCCACCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQWLGPL*RLHLRR
Trigger: TCTCCTCAGGTGGAGTCTGCAGAGTGGACCCAGCCA...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATTGCGCGCGCTCAGGCTaGACCACAGCCCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDCARSG*TTARPR
Trigger: CCGAGGCCGGGCTGTGGTCCAGCCTGAGCGCGCGCA...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGCATGTCGGTGATGCGTaGGCACCACGAGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQHVGDA*APREVK
Trigger: CTTGACCTCTCGTGGTGCCCACGCATCACCGACATG...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACCAGGTATGGTGCGGTaGAAGATGCAGGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRPGMVR*KMQEAR
Trigger: ACGGGCTTCCTGCATCTTCCACCGCACCATACCTGG...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCCCAATTCTCTCAGCCTaGCCAGGGACCAAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRPILSA*PGTKAG
Trigger: CCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGG...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGTGGCTCTCTGGAAACTaGTTACTCTCTTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: EGGYSSRLARCLRHPWVEWLSGN*LLSSNQ
Trigger: CTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCA...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACTGGCTCTCTGGAAACTaGTTACTCTCTTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADWLSGN*LLSSNQ
Trigger: CTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCA...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp AAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAGCGTTGCATTAATACTTTaGGCAAATGGACAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KMQEARGALLGPCPGGPSVALIL*ANGQLP
Trigger: GGGCAGCTGTCCATTTGCCCAAAGTATTAATGCAAC...GCTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp AAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAGCCTGTTGATCTGTTTCTaGTTCAACAGCATCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KMQEARGALLGPCPGGPSLLICF*FNSISL
Trigger: GAGAGAGATGCTGTTGAATCAGAAACAGATCAACAG...GCTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGCTGGCGGCAAAACCCTaGAGGTTCACGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQLAAKP*RFTNSF
Trigger: GAAGGAGTTCGTGAACCTGCAGGGTTTTGCCGCCAG...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGCAGCGGGGCAGGTGCTaGGAGAAATACTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQQRGRC*EKYLKS
Trigger: GCTCTTCAAGTATTTCTCGCAGCACCTGCCCCGCTG...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGAAGGCAGCGGGGCAGGTaGTGCGAGAAATACTTGAAG +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRRQRGR*CEKYLK
Trigger: CTTCAAGTATTTCTCGCAGCACCTGCCCCGCTGCCT...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCGTTTCGAGGCAAGCATaGAGGCTTGGGGTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRVSRQA*RLGVAV
Trigger: GACGGCGACCCCAAGCCTCCATGCTTGCCTCGAAAC...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACCGACCGGAGTCAGCTaGGATCACGTTAATGACTCC +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRPTGVS*DHVNDS
Trigger: GGAGTCATTAACGTGATCCCAGCTGACTCCGGTCGG...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCACCCTGACCCTTGGCTaGGTCCACTCTGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRTLTLG*VHSADS
Trigger: GGAGTCTGCAGAGTGGACCCAGCCAAGGGTCAGGGT...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTCCACGCCGTCGTCGGTaGCCTTGGAGCAGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGPRRRR*PWSSPR
Trigger: TCTCGGGCTGCTCCAAGGTCACCGACGACGGCGTGG...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCGAAGATTGGAGTCGCTaGCCCAGTGCTGACCCTGAC +
Preference number: 4 (lower is better)
Translates to: LVTLFQPDRECPKIGCGREDWSR*PSADPD
Trigger: GTCAGGGTCAGCACTGGGTCAGCGACTCCAATCTTC...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGAGACGCACCACGCCCTaGATCTGTTCAAGCATAACC +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQRRTTP*ICSSIT
Trigger: GGTTATGCTTGAACAGATGCAGGGCGTGGTGCGTCT...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTCAAAGTCCCCGAGTGTaGGTGCGTGCGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGQSPRV*VRAWGG
Trigger: CCCGCCCCACGCACGCACGCACACTCGGGGACTTTG...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCGGGCTCCAGGTATGGTaGGGTGGAAGATGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRGLQVW*GGRCRK
Trigger: CTTCCTGCATCTTCCACCGCACCATACCTGGAGCCC...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATAAAGGAGCTCCCCGGTaGGAGAGGATCGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDKGAPR*ERIGRP
Trigger: GGGGCGGCCGATCCTCTCCCACCGGGGAGCTCCTTT...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATCCCAGGCCGTTGGGCTaGCCCGGCAGCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDPRPLG*PGSFTR
Trigger: TCTGGTGAAGCTGCCGGGCCAGCCCAACGGCCTGGG...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATGGTGGGGGTGGTGGCTaGCAGGGGCGGTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDGGGGG*QGRFLV
Trigger: CACCAAGAACCGCCCCTGCCAGCCACCACCCCCACC...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATGCAGCAGCTGCGAGATaGCCGCGATGGCGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDAAAAR*PRWRRR
Trigger: CCGACGACGCCATCGCGGCCATCTCGCAGCTGCTGC...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTCTCGGCGGCGGGCCATaGCTTTGGCGGTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGLGGGP*LWRWPV
Trigger: AACAGGCCACCGCCAAAGCCATGGCCCGCCGCCGAG...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTTGCCTGCGCCACCCCTaGGTTGAGGCCGACCGGAGT +
Preference number: 4 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGCLRHP*VEADRS
Trigger: ACTCCGGTCGGCCTCAACCCAGGGGTGGCGCAGGCA...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGGTGTCTAGGGTGTGCTaGCCACTGGAAGATTGGAGT +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQVSRVC*PLEDWS
Trigger: ACTCCAATCTTCCAGTGGCCAGCACACCCTAGACAC...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTACAGCCCGGCCTCGGTaGAGTCGTTGCAGCCCGACA +
Preference number: 4 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGTARPR*SRCSPT
Trigger: TGTCGGGCTGCAACGACTTCACCGAGGCCGGGCTGT...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGTTGGGCAGCAGCTaGGAGATGGCCGCGATGGCG +
Preference number: 4 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDRLGSS*EMAAMA
Trigger: CGCCATCGCGGCCATCTCGCAGCTGCTGCCCAACCT...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATGGCCTGCCCAGAACTTaGGCTGGTACAGCACGCGCC +
Preference number: 4 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDGLPRT*AGTARA
Trigger: GGCGCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCC...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATACCAAGGCCGGGTTTTaGGGCGGACAGGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDTKAGF*GGQGTA
Trigger: GGCAGTCCCCTGTCCGCCCCAAAACCCGGCCTTGGT...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGCTCTCTCTCACTCTCTaGCTCTCTGGAAACTGGTTA +
Preference number: 4 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMLSLTL*LSGNWL
Trigger: TAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAG...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
3UTR CAA 72 bp TTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATaGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LLSSNQIGSVPR*GVGAVSPGAQG
Trigger: ACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGGCGCATAGTTGTCAATaGACTCACAGATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQAHSCQ*THRCPG
Trigger: ACCTGGACATCTGTGAGTTCATTGACAACTATGCGC...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATCCCAGGGCCAGGAGGTaGTTCAGCCCGAAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDPRARR*FSPKSC
Trigger: GCAAGACTTCGGGCTGAAGCACCTCCTGGCCCTGGG...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTCCCAGGGCCAGGAGGTaGTTCAGCCCGAAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGPRARR*FSPKSC
Trigger: GCAAGACTTCGGGCTGAAGCACCTCCTGGCCCTGGG...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGATGGCTCTCTGGAAACTaGTTACTCTCTTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRWLSGN*LLSSNQ
Trigger: CTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCA...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGCCCAGGTGCCAAGGCTaGGGCTGGTCCACCTGCCGG +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQPRCQG*GWSTCR
Trigger: CCGGCAGGTGGACCAGCCTCAGCCTTGGCACCTGGG...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGCGCCACCCCTGGGTTaGGGCCGACCGGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQAPPLG*GRPESA
Trigger: AGCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGAGGGCGGCGTGCAGTaGGGGCACGAGGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQEGGVQ*GHEGHA
Trigger: TGCATGCCCCTCGTGCCCGCACTGCACGCCGCCCTC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTCAGGCCTTGCACACCTaGGCCAGCACACACTTCTCG +
Preference number: 4 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGQALHT*ASTHFS
Trigger: CGAGAAGTGTGTGCTGGCCCAGGTGTGCAAGGCCTG...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATACCCTGACCCTTGGCTaGGTCCACTCTGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDTLTLG*VHSADS
Trigger: GGAGTCTGCAGAGTGGACCCAGCCAAGGGTCAGGGT...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATGCTGACCCTGACCCTTaGCTGGGTCCACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDADPDP*LGPLCR
Trigger: TCTGCAGAGTGGACCCAGCCAAGGGTCAGGGTCAGC...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGCTGACCCTGACCCTTaGCTGGGTCCACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGADPDP*LGPLCR
Trigger: TCTGCAGAGTGGACCCAGCCAAGGGTCAGGGTCAGC...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTTCCCAAGATTGGGTGTaGGCGCGGTATCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGSQDWV*ARYLLG
Trigger: CCCCAGGAGATACCGCGCCCACACCCAATCTTGGGA...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR TCA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGCTGTTGATCTGTTTCTaGTTCAACAGCATCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQLLICF*FNSISL
Trigger: GAGAGAGATGCTGTTGAATCAGAAACAGATCAACAG...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGGTGGGGGTGGTGGCTaGCAGGGGCGGTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQGGGGG*QGRFLV
Trigger: CACCAAGAACCGCCCCTGCCAGCCACCACCCCCACC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGTCCTCCTACAGTCGTTaGAAATATCACAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKSSYSR*KYHSFS
Trigger: ACTGAAGCTGTGATATTTCCAACGACTGTAGGAGGA...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGCCTCGCGCTACTCAATaGCGAGGCAGCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQPRATQ*RGSGAG
Trigger: ACCTGCCCCGCTGCCTCGTCATTGAGTAGCGCGAGG...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGGCGACCTCCCGTCATaGGGAGCGCACGGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQGDLPS*GAHGKE
Trigger: CTCCTTTCCGTGCGCTCCCCATGACGGGAGGTCGCC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324361.9
CDS-3UTR CCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGCAAGCATGGAGGCTTaGGGTCGCCGTCGATGCCCG +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQASMEA*GRRRCP
Trigger: CGGGCATCGACGGCGACCCCAAGCCTCCATGCTTGC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGTGGGTCAGGCTGGATaGGTGAGGAGGTGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQVGQAG*VRRCGW
Trigger: CCACCCGCACCTCCTCACCCATCCAGCCTGACCCAC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGCACCGGCGTGAGGCCTaGCCAGAACTTGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQHRREA*PELGLV
Trigger: TACCAGCCCAAGTTCTGGGCAGGCCTCACGCCGGTG...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTAGACGCACCACGCCCTaGATCTGTTCAAGCATAACC +
Preference number: 4 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGRRTTP*ICSSIT
Trigger: GGTTATGCTTGAACAGATGCAGGGCGTGGTGCGTCT...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR GCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGCAAGGCTGCGCAGCTTaGGCAGGTTCTCGGCCACGA +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQQGCAA*AGSRPR
Trigger: TCGTGGCCGAGAACCTGCGCAAGCTGCGCAGCCTTG...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGTCGAGGCTTGCAAGGTaGCTGCGCCACCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQSRLAR*LRHPWV
Trigger: AACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGA...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGTATCACAGCTTCAGTTaGATTAATACTTTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMYHSFS*INTLGK
Trigger: TTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATA...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGATATCACAGCTTCAGTTaGATTAATACTTTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRYHSFS*INTLGK
Trigger: TTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATA...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGGAGGGCTCCAGGTATaGTGCGGTGGAAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQGGLQV*CGGRCR
Trigger: CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR GCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGCTGGCGGCAAAACCCTaGAGGTTCACGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQLAAKP*RFTNSF
Trigger: GAAGGAGTTCGTGAACCTGCAGGGTTTTGCCGCCAG...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTTCCTCCTACAGTCGTTaGAAATATCACAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGSSYSR*KYHSFS
Trigger: ACTGAAGCTGTGATATTTCCAACGACTGTAGGAGGA...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR TCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGCGCATAGTTGTCAATaGACTCACAGATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQAHSCQ*THRCPG
Trigger: ACCTGGACATCTGTGAGTTCATTGACAACTATGCGC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CCA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGTTGCATTAATACTTTaGGCAAATGGACAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VVGNITASVALILWANGQVALIL*ANGQLP
Trigger: GGGCAGCTGTCCATTTGCCCAAAGTATTAATGCAAC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CCA 90 bp GGCTCCTGGCTCATGCCACGCTGTCCGCCGGGCGACCTCCCGTCATaGGGAGCCCGGCATGGGCGTCGGCGCGCGGGGGCCGCCGGGGTG +
Preference number: 5 (lower is better)
Translates to: GSWLMPRCPPGDLPS*GARHGRRRAGAAGV
Trigger: CACCCCGGCGGCCCCCGCGCGCCGACGCCCATGCCGGGCTCCCCATGACGGGAGGTCGCCCGGCGGACAGCGTGGCATGAGCCAGGAGCC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397621.6
CDS TCA 90 bp CGTGGCCAGCGGCGGCCGCTCCGCTGGGTGCCCAGGTGCCAAGGCTaGGGCTGGTCCACCTGCCGGGGTGCACGGGCCCCCAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RGQRRPLRWVPRCQG*GWSTCRGARAPSQG
Trigger: GCCCTGGCTGGGGGCCCGTGCACCCCGGCAGGTGGACCAGCCTCAGCCTTGGCACCTGGGCACCCAGCGGAGCGGCCGCCGCTGGCCACG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 90 bp ACCCACCGGGAAGGACGGGGGTCCAGCCAACCCGTGCTGCGGTTCTaGGGTTCCCACTCCCCAGGCTCCGAGGGCTCTGCCCGCCGCGCC +
Preference number: 5 (lower is better)
Translates to: THREGRGSSQPVLRF*GSHSPGSEGSARRA
Trigger: GGCGCGGCGGGCAGAGCCCTCGGAGCCTGGGGAGTGGGAACCGCAGAACCGCAGCACGGGTTGGCTGGACCCCCGTCCTTCCCGGTGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562648.2
CDS-3UTR CAA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGGCCGCACCCAGGCCGTaGGGCTGGCCCGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWAAPRP*GWPGSF
Trigger: GAAGCTGCCGGGCCAGCCCAACGGCCTGGGTGCGGC...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCTCAAGGCTGCGCAGCTaGCGCAGGTTCTCGGCCACG +
Preference number: 5 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLASRLRS*RRFSAT
Trigger: CGTGGCCGAGAACCTGCGCAAGCTGCGCAGCCTTGA...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS TCA 90 bp GTGGTGGCTGGCAGGGGCGGTTCTTGGTGGCTGGCGTGCCCTTGGTaGTGCTGGCCGCACCCAGGCCGTTGGGCTGGCCCGGCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: VVAGRGGSWWLACPW*CWPHPGRWAGPAAS
Trigger: TGAAGCTGCCGGGCCAGCCCAACGGCCTGGGTGCGGCCAGCATCACCAAGGGCACGCCAGCCACCAAGAACCGCCCCTGCCAGCCACCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS TCA 90 bp AGGAGAGCAGGCGCAGCGTGTGCGTGCTGTGGCCCTGGCGCGCCGTaGAGTAGGCCAGCGCCGTGTCCGTCACGTGGTAGGCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: RRAGAACACCGPGAP*SRPAPCPSRGRPAG
Trigger: GCCTGCAGGCCTACCACGTGACGGACACGGCGCTGGCCTACTTCACGGCGCGCCAGGGCCACAGCACGCACACGCTGCGCCTGCTCTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS GCA 90 bp TTGAGGATCTTCTCGTCCGTGGCCAGCGGCGGCCGCTCCGCTGGGTaGCCAGGTGCCAAGGCTGAGGCTGGTCCACCTGCCGGGGTGCAC +
Preference number: 5 (lower is better)
Translates to: LRIFSSVASGGRSAG*PGAKAEAGPPAGVH
Trigger: GTGCACCCCGGCAGGTGGACCAGCCTCAGCCTTGGCACCTGGGCACCCAGCGGAGCGGCCGCCGCTGGCCACGGACGAGAAGATCCTCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 90 bp CGGCCCGGGGGCGCGCACCTGTCGAGCACGAGCTCCTCTAGGCGGTaGAGGTCGCAGGCCACGTACTCCAGCGCCATGTCGGTGATGCGT +
Preference number: 5 (lower is better)
Translates to: RPGGAHLSSTSSSRR*RSQATYSSAMSVMR
Trigger: ACGCATCACCGACATGGCGCTGGAGTACGTGGCCTGCGACCTGCACCGCCTAGAGGAGCTCGTGCTCGACAGGTGCGCGCCCCCGGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562648.2
CDS CCA 90 bp GGAGCAGCCAGGCTGGGTGGTGGGAGGGTGGGTGGGGGTGGTGGCTaGCAGGGGCGGTTCTTGGTGGCTGGCGTGCCCTTGGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: GAARLGGGRVGGGGG*QGRFLVAGVPLVML
Trigger: CAGCATCACCAAGGGCACGCCAGCCACCAAGAACCGCCCCTGCCAGCCACCACCCCCACCCACCCTCCCACCACCCAGCCTGGCTGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CCA 90 bp GGACAGTGGAGCAGCCAGGCTGGGTGGTGGGAGGGTGGGTGGGGGTaGTGGCTGGCAGGGGCGGTTCTTGGTGGCTGGCGTGCCCTTGGT +
Preference number: 5 (lower is better)
Translates to: GQWSSQAGWWEGGWG*WLAGAVLGGWRALG
Trigger: ACCAAGGGCACGCCAGCCACCAAGAACCGCCCCTGCCAGCCACCACCCCCACCCACCCTCCCACCACCCAGCCTGGCTGCTCCACTGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CCA 90 bp CCGTGTCCGTCACGTGGTAGGCCTGCAGGCTCAGCTCCGCCAGGTTaGGCAGCAGCTGCGAGATGGCCGCGATGGCGTCGTCGGCCACGT +
Preference number: 5 (lower is better)
Translates to: PCPSRGRPAGSAPPG*AAAARWPRWRRRPR
Trigger: ACGTGGCCGACGACGCCATCGCGGCCATCTCGCAGCTGCTGCCCAACCTGGCGGAGCTGAGCCTGCAGGCCTACCACGTGACGGACACGG
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGGTGGCTGGCGTGCCCTaGGTGATGCTGGCCGCACCC +
Preference number: 5 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWVAGVP*VMLAAP
Trigger: GGGTGCGGCCAGCATCACCAAGGGCACGCCAGCCAC...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp AAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGACCCAGCGTGGCTGGCGTGCCCTaGGTGATGCTGGCCGCACCC +
Preference number: 5 (lower is better)
Translates to: KMQEARGALLGPCPGGPSVAGVP*VMLAAP
Trigger: GGGTGCGGCCAGCATCACCAAGGGCACGCCAGCCAC...GCTGGGTCCCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 90 bp CCAGACCGTTTCGAGGCAAGCATGGAGGCTTGGGGTCGCCGTCGATaGCCGGGCTCGACATCTTCCTGGCACGCTCTCGGCCCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: PDRFEASMEAWGRRR*PGSTSSWHALGPGS
Trigger: GGAGCCCGGGCCGAGAGCGTGCCAGGAAGATGTCGAGCCCGGGCATCGACGGCGACCCCAAGCCTCCATGCTTGCCTCGAAACGGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CCA 90 bp GCTGGCGTGCCCTTGGTGATGCTGGCCGCACCCAGGCCGTTGGGCTaGCCCGGCAGCTTCACCAGACCGTTTCGAGGCAAGCATGGAGGC +
Preference number: 5 (lower is better)
Translates to: AGVPLVMLAAPRPLG*PGSFTRPFRGKHGG
Trigger: GCCTCCATGCTTGCCTCGAAACGGTCTGGTGAAGCTGCCGGGCCAGCCCAACGGCCTGGGTGCGGCCAGCATCACCAAGGGCACGCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGCGGCGGGCCATGGCTTaGGCGGTGGCCTGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: EGGYSSRLARCLRHPWVERRAMA*AVACFP
Trigger: GGGGAAACAGGCCACCGCCAAAGCCATGGCCCGCCG...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGTGCGCCACCCCTGGGTaGAGGCCGACCGGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: EGGYSSRLARCLRHPWVECATPG*RPTGVS
Trigger: GCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGCA...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS CCA 90 bp TCCTTGGCATGCAGCACCGGCGTGAGGCCTGCCCAGAACTTGGGCTaGTACAGCACGCGCCGCCAGGCCTTGCACACCTGGGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: SLACSTGVRPAQNLG*YSTRRQALHTWAST
Trigger: TGTGCTGGCCCAGGTGTGCAAGGCCTGGCGGCGCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCCTCACGCCGGTGCTGCATGCCAAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGAGGCCTGCCCAGAACTaGGGCTGGTACAGCACGCGC +
Preference number: 5 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGRPAQN*GWYSTR
Trigger: GCGCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCCT...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACCCGTCGTCGGTGACCTaGGAGCAGCCCGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADPSSVT*EQPERL
Trigger: CAGCCTCTCGGGCTGCTCCAAGGTCACCGACGACGG...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGGACCAAGGCCGGGTTTaGGGGCGGACAGGGGACTGC +
Preference number: 5 (lower is better)
Translates to: EGGYSSRLARCLRHPWVEDQGRV*GRTGDC
Trigger: GCAGTCCCCTGTCCGCCCCAAAACCCGGCCTTGGTC...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS TCA 90 bp CCGGTGGGAGAGGATCGGCCGCCCCAAGCCTCCCACCGGGGAGGCTaGGGCTGTGCCCAGATAAATAAGGCCGCTTTGCAGGGAACCAGG +
Preference number: 5 (lower is better)
Translates to: PVGEDRPPQASHRGG*GCAQINKAALQGTR
Trigger: CCTGGTTCCCTGCAAAGCGGCCTTATTTATCTGGGCACAGCCTCAGCCTCCCCGGTGGGAGGCTTGGGGCGGCCGATCCTCTCCCACCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS TCA 90 bp CACCAGGCAGCACGTTGTAGAGCTCCTTGGCATGCAGCACCGGCGTaGGGCCTGCCCAGAACTTGGGCTGGTACAGCACGCGCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: HQAARCRAPWHAAPA*GLPRTWAGTARAAR
Trigger: CCTGGCGGCGCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCCTCACGCCGGTGCTGCATGCCAAGGAGCTCTACAACGTGCTGCCTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS TCA 90 bp CTAGGCGGTGCAGGTCGCAGGCCACGTACTCCAGCGCCATGTCGGTaGTGCGTGGGCACCACGAGAGGTCAAGGCTGCGCAGCTTGCGCA +
Preference number: 5 (lower is better)
Translates to: LGGAGRRPRTPAPCR*CVGTTRGQGCAACA
Trigger: TGCGCAAGCTGCGCAGCCTTGACCTCTCGTGGTGCCCACGCATCACCGACATGGCGCTGGAGTACGTGGCCTGCGACCTGCACCGCCTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
ENST00000562648.2
CDS GCA 90 bp ACCTTCAAATCACCTGGCCCCGGCCATCCCTCGTCTTCCTGGGAGTaGCCCTGGCGTGAATCCCTTCCTGCCCCACCCGGAGCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: TFKSPGPGHPSSSWE*PWRESLPAPPGAAA
Trigger: AGCGGCTGCTCCGGGTGGGGCAGGAAGGGATTCACGCCAGGGGCACTCCCAGGAAGACGAGGGATGGCCGGGGCCAGGTGATTTGAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562648.2
CDS CCA 90 bp GGCCCGGCAGCTTCACCAGACCGTTTCGAGGCAAGCATGGAGGCTTaGGGTCGCCGTCGATGCCCGGGCTCGACATCTTCCTGGCACGCT +
Preference number: 5 (lower is better)
Translates to: GPAASPDRFEASMEA*GRRRCPGSTSSWHA
Trigger: AGCGTGCCAGGAAGATGTCGAGCCCGGGCATCGACGGCGACCCCAAGCCTCCATGCTTGCCTCGAAACGGTCTGGTGAAGCTGCCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp GGCTGGGAGGGCGGAGGGACCGAAGGTCGGGGAGGGGCTTTCCCTCGGCTCGCCTACCAGAAGAGCCCATaGAGGATCTTCTCGTCCGTG +
Preference number: 5 (lower is better)
Translates to: GWEGGGTEGRGGAFPRLAYQKSP*RIFSSV
Trigger: CACGGACGAGAAGATCCTCAATGGGCTCTTCTGGTA...GGCGAGCCGAGGGAAAGCCCCTCCCCGACCTTCGGTCCCTCCGCCCTCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGGCGTCGTCGGCCACGTaGATGCAGTCACTCACGCTC +
Preference number: 5 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGASSAT*MQSLTL
Trigger: GAGCGTGAGTGACTGCATCAACGTGGCCGACGACGC...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACCTCAGCTCCGCCAGGTaGGGCAGCAGCTGCGAGATG +
Preference number: 5 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADLSSAR*GSSCEM
Trigger: CATCTCGCAGCTGCTGCCCAACCTGGCGGAGCTGAG...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACTCAAGGCTGCGCAGCTaGCGCAGGTTCTCGGCCACG +
Preference number: 5 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADSRLRS*RRFSAT
Trigger: CGTGGCCGAGAACCTGCGCAAGCTGCGCAGCCTTGA...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAACGGCGGGCCATGGCTTaGGCGGTGGCCTGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQERRAMA*AVACFP
Trigger: GGGGAAACAGGCCACCGCCAAAGCCATGGCCCGCCG...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS GCA 90 bp GGCCTGCCCAGAACTTGGGCTGGTACAGCACGCGCCGCCAGGCCTTaGACACCTGGGCCAGCACACACTTCTCGCAGGCCGAGAAATACC +
Preference number: 5 (lower is better)
Translates to: GLPRTWAGTARAARP*TPGPAHTSRRPRNT
Trigger: GGTATTTCTCGGCCTGCGAGAAGTGTGTGCTGGCCCAGGTGTGCAAGGCCTGGCGGCGCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 90 bp CAGCACGTTGTAGAGCTCCTTGGCATGCAGCACCGGCGTGAGGCCTaGCCAGAACTTGGGCTGGTACAGCACGCGCCGCCAGGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: QHVVELLGMQHRREA*PELGLVQHAPPGLA
Trigger: TGCAAGGCCTGGCGGCGCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCCTCACGCCGGTGCTGCATGCCAAGGAGCTCTACAACGTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 90 bp TTGGAGCAGCCCGAGAGGCTGAGCGCGGTGAGGTTGGGCAGGCTGTaGACCACGTTGACCACGCCGTGGTTGGTGATCTCCCAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LEQPERLSAVRLGRL*TTLTTPWLVISQQE
Trigger: CTCCTGCTGGGAGATCACCAACCACGGCGTGGTCAACGTGGTGCACAGCCTGCCCAACCTCACCGCGCTCAGCCTCTCGGGCTGCTCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS GCA 90 bp GACAGCTCCAGACGCACCACGCCCTGCATCTGTTCAAGCATAACCTaGAGGCGGGCGGGCGCCGGGTCAGGATTGCAGGAGAAGGGGTGG +
Preference number: 5 (lower is better)
Translates to: DSSRRTTPCICSSIT*RRAGAGSGLQEKGW
Trigger: CCACCCCTTCTCCTGCAATCCTGACCCGGCGCCCGCCCGCCTGCAGGTTATGCTTGAACAGATGCAGGGCGTGGTGCGTCTGGAGCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562563.1
CDS GCA 90 bp TCGGTGAAGTCGTTGCAGCCCGACAGCTCCAGACGCACCACGCCCTaGATCTGTTCAAGCATAACCTGCAGGCGGGCGGGCGCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: SVKSLQPDSSRRTTP*ICSSITCRRAGAGS
Trigger: TGACCCGGCGCCCGCCCGCCTGCAGGTTATGCTTGAACAGATGCAGGGCGTGGTGCGTCTGGAGCTGTCGGGCTGCAACGACTTCACCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562563.1
CDS CCA 90 bp GTTGGGCTGGCCCGGCAGCTTCACCAGACCGTTTCGAGGCAAGCATaGAGGCTTGGGGTCGCCGTCGATGCCCGGGCTCGACATCTTCCT +
Preference number: 5 (lower is better)
Translates to: VGLARQLHQTVSRQA*RLGVAVDARARHLP
Trigger: AGGAAGATGTCGAGCCCGGGCATCGACGGCGACCCCAAGCCTCCATGCTTGCCTCGAAACGGTCTGGTGAAGCTGCCGGGCCAGCCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGAGGCTGTGCACCACGTaGACCACGCCGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: EGGYSSRLARCLRHPWVERLCTT*TTPWLV
Trigger: CACCAACCACGGCGTGGTCAACGTGGTGCACAGCCT...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGCCGTCGTCGGTGACCTaGGAGCAGCCCGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRPSSVT*EQPERL
Trigger: CAGCCTCTCGGGCTGCTCCAAGGTCACCGACGACGG...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGCTTCAGCCCGAAGTCTaGCACCTGGCAGCACCATCG +
Preference number: 5 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGLQPEV*HLAAPS
Trigger: CGATGGTGCTGCCAGGTGCAAGACTTCGGGCTGAAG...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGGGCGCCGGGTCAGGATaGCAGGAGAAGGGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRGAGSG*QEKGWS
Trigger: GCTCCACCCCTTCTCCTGCAATCCTGACCCGGCGCC...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562563.1
CDS-3UTR CAA 90 bp TGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTGGGCCCGTGTCCTGGGGATAAATAAGGCCGCTTaGCAGGGAACCAGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: CGGRCRKPVGLFWARVLGINKAA*QGTRRA
Trigger: CGCCCGCCTGGTTCCCTGCAAAGCGGCCTTATTTAT...CCCCAGGACACGGGCCCAGAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGGGCAAGCATGGAGGCTaGGGGTCGCCGTCGATGCCC +
Preference number: 5 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMGKHGG*GSPSMP
Trigger: GGGCATCGACGGCGACCCCAAGCCTCCATGCTTGCC...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGTGCGCCACCCCTGGGTaGAGGCCGACCGGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQCATPG*RPTGVS
Trigger: GCTGACTCCGGTCGGCCTCAACCCAGGGGTGGCGCA...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCGCTACAGCTCGAGGCTaGCAAGGTGCCTGCGCCACC +
Preference number: 5 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALATARG*QGACAT
Trigger: GGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGC...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGCTGGCCACTGGAAGATaGGAGTCGCTGACCCAGTGC +
Preference number: 5 (lower is better)
Translates to: EGGYSSRLARCLRHPWVELATGR*ESLTQC
Trigger: GCACTGGGTCAGCGACTCCAATCTTCCAGTGGCCAG...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACCTGGCCACTGGAAGATaGGAGTCGCTGACCCAGTGC +
Preference number: 5 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADLATGR*ESLTQC
Trigger: GCACTGGGTCAGCGACTCCAATCTTCCAGTGGCCAG...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS TCA 90 bp CCAGCACACACTTCTCGCAGGCCGAGAAATACCAGAAGAGCCCATTaGGGATCTTCTCGTCCGTGGCCAGCGGCGGCCGCTCCGCTGGGT +
Preference number: 5 (lower is better)
Translates to: PAHTSRRPRNTRRAH*GSSRPWPAAAAPLG
Trigger: ACCCAGCGGAGCGGCCGCCGCTGGCCACGGACGAGAAGATCCTCAATGGGCTCTTCTGGTATTTCTCGGCCTGCGAGAAGTGTGTGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 90 bp TCCGTGATGCGTACACACCTGTCGAGCACGAGCTCCTCTAGGCGGTaGAGGTCGCAGGCCACGTACTCCAGCGCCATGTCGGTGATGCGT +
Preference number: 5 (lower is better)
Translates to: SVMRTHLSSTSSSRR*RSQATYSSAMSVMR
Trigger: ACGCATCACCGACATGGCGCTGGAGTACGTGGCCTGCGACCTGCACCGCCTAGAGGAGCTCGTGCTCGACAGGTGTGTACGCATCACGGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp GAGGGTGGCTACAGCTCGAGGCTTGCAAGGTGCCTGCGCCACCCCTGGGTTGAGATAAATAAGGCCGCTTaGCAGGGAACCAGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: EGGYSSRLARCLRHPWVEINKAA*QGTRRA
Trigger: CGCCCGCCTGGTTCCCTGCAAAGCGGCCTTATTTAT...CTCAACCCAGGGGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGCCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCGCGTCGTCGGCCACGTaGATGCAGTCACTCACGCTC +
Preference number: 5 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALASSAT*MQSLTL
Trigger: GAGCGTGAGTGACTGCATCAACGTGGCCGACGACGC...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp GGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAAGCCCGTGGGGCTCTTCTTGACCACGCCGTGGTaGGTGATCTCCCAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: GGLQVWCGGRCRKPVGLFLTTPW*VISQQE
Trigger: CTCCTGCTGGGAGATCACCAACCACGGCGTGGTCAA...GAAGAGCCCCACGGGCTTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp TGGAGAAACTGGCTCCTGACCACTCAGCCCTGGAGCTTCCTGGGGCTGGCACTCAGGCTGTGCACCACGTaGACCACGCCGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: WRNWLLTTQPWSFLGLALRLCTT*TTPWLV
Trigger: CACCAACCACGGCGTGGTCAACGTGGTGCACAGCCT...GAGTGCCAGCCCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTTTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACCGTCGTCGGTGACCTaGGAGCAGCCCGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRPSSVT*EQPERL
Trigger: CAGCCTCTCGGGCTGCTCCAAGGTCACCGACGACGG...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGTCAAGGCTGCGCAGCTaGCGCAGGTTCTCGGCCACG +
Preference number: 5 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMSRLRS*RRFSAT
Trigger: CGTGGCCGAGAACCTGCGCAAGCTGCGCAGCCTTGA...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGGACCAAGGCCGGGTTTaGGGGCGGACAGGGGACTGC +
Preference number: 5 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPDQGRV*GRTGDC
Trigger: GCAGTCCCCTGTCCGCCCCAAAACCCGGCCTTGGTC...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp GTGTCCCAAGATTGGGTGTGGGCGCGGTATCTCCTGGGGCTCAAGGTTGGGATGGCTACAGCTCGAGGCTaGCAAGGTGCCTGCGCCACC +
Preference number: 5 (lower is better)
Translates to: VSQDWVWARYLLGLKVGMATARG*QGACAT
Trigger: GGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGC...CATCCCAACCTTGAGCCCCAGGAGATACCGCGCCCACACCCAATCTTGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS CCA 90 bp CAGAACTTGGGCTGGTACAGCACGCGCCGCCAGGCCTTGCACACCTaGGCCAGCACACACTTCTCGCAGGCCGAGAAATACCAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: QNLGWYSTRRQALHT*ASTHFSQAEKYQKS
Trigger: GCTCTTCTGGTATTTCTCGGCCTGCGAGAAGTGTGTGCTGGCCCAGGTGTGCAAGGCCTGGCGGCGCGTGCTGTACCAGCCCAAGTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CCA 90 bp TGTCCAGGTCGGAGACGCCAACCAGGCAGAAGCCCTCGAAGCCTCTaGCGGCAAAACCCTGCAGGTTCACGAACTCCTTCTCGCCACCAG +
Preference number: 5 (lower is better)
Translates to: CPGRRRQPGRSPRSL*RQNPAGSRTPSRHQ
Trigger: CTGGTGGCGAGAAGGAGTTCGTGAACCTGCAGGGTTTTGCCGCCAGAGGCTTCGAGGGCTTCTGCCTGGTTGGCGTCTCCGACCTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp CCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAAGAGGCCTGCCCAGAACTaGGGCTGGTACAGCACGCGC +
Preference number: 5 (lower is better)
Translates to: PNVSGRQSTVRAHLGRQKRPAQN*GWYSTR
Trigger: GCGCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCCT...CTTCTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACGTGATGGTGGAGCGCTaGAGGCTCATGGCTTTGACA +
Preference number: 5 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADVMVER*RLMALT
Trigger: TGTCAAAGCCATGAGCCTCAAGCGCTCCACCATCAC...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGCTCAGCTCCGCCAGGTaGGGCAGCAGCTGCGAGATG +
Preference number: 5 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPLSSAR*GSSCEM
Trigger: CATCTCGCAGCTGCTGCCCAACCTGGCGGAGCTGAG...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGGCTACAGCTCGAGGCTaGCAAGGTGCCTGCGCCACC +
Preference number: 5 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQATARG*QGACAT
Trigger: GGTGGCGCAGGCACCTTGCAAGCCTCGAGCTGTAGC...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAACTGGCCACTGGAAGATaGGAGTCGCTGACCCAGTGC +
Preference number: 5 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQELATGR*ESLTQC
Trigger: GCACTGGGTCAGCGACTCCAATCTTCCAGTGGCCAG...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGGGGAGTGTCCCAAGATaGGGTGTGGGCGCGGTATCT +
Preference number: 5 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRGSVPR*GVGAVS
Trigger: AGATACCGCGCCCACACCCAATCTTGGGACACTCCC...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGGCCTCGGTGAAGTCGTaGCAGCCCGACAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQASVKS*QPDSSR
Trigger: TCTGGAGCTGTCGGGCTGCAACGACTTCACCGAGGC...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGGCCTCGGTGAAGTCGTaGCAGCCCGACAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPASVKS*QPDSSR
Trigger: TCTGGAGCTGTCGGGCTGCAACGACTTCACCGAGGC...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGAGCGTCGTCGGCCACGTaGATGCAGTCACTCACGCTC +
Preference number: 5 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRASSAT*MQSLTL
Trigger: GAGCGTGAGTGACTGCATCAACGTGGCCGACGACGC...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGAGGCTGTGCACCACGTaGACCACGCCGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQRLCTT*TTPWLV
Trigger: CACCAACCACGGCGTGGTCAACGTGGTGCACAGCCT...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGTGCTGCGAGAAATACTaGAAGAGCTCGGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRCCEKY*KSSGVA
Trigger: GGCCACCCCCGAGCTCTTCAAGTATTTCTCGCAGCA...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp TTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGGTGATGGTGGAGCGCTaGAGGCTCATGGCTTTGACA +
Preference number: 5 (lower is better)
Translates to: FPLTPLGGLQVWCGGRCRVMVER*RLMALT
Trigger: TGTCAAAGCCATGAGCCTCAAGCGCTCCACCATCAC...CCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGTTGACCACGCCGTGGTaGGTGATCTCCCAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPLTTPW*VISQQE
Trigger: CTCCTGCTGGGAGATCACCAACCACGGCGTGGTCAA...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp GGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGATTGACCACGCCGTGGTaGGTGATCTCCCAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: GLPNVSGRQSTVRAHLGRLTTPW*VISQQE
Trigger: CTCCTGCTGGGAGATCACCAACCACGGCGTGGTCAA...TCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp ACCGGAGTCAGCTGGGATCACGTTAATGACTCCAAGCGATCGCCAGCCCTTCCGCTTCAGCCCGAAGTCTaGCACCTGGCAGCACCATCG +
Preference number: 5 (lower is better)
Translates to: TGVSWDHVNDSKRSPALPLQPEV*HLAAPS
Trigger: CGATGGTGCTGCCAGGTGCAAGACTTCGGGCTGAAG...CGGAAGGGCTGGCGATCGCTTGGAGTCATTAACGTGATCCCAGCTGACTCCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGCTTCAGCCCGAAGTCTaGCACCTGGCAGCACCATCG +
Preference number: 5 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQLQPEV*HLAAPS
Trigger: CGATGGTGCTGCCAGGTGCAAGACTTCGGGCTGAAG...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp CTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGACAGGGGAGTGTCCCAAGATaGGGTGTGGGCGCGGTATCT +
Preference number: 5 (lower is better)
Translates to: LPNVSGRQSTVRAHLGRQGSVPR*GVGAVS
Trigger: AGATACCGCGCCCACACCCAATCTTGGGACACTCCC...CTGTCTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp CGGTGGCCTGTTTCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAGTTGCATTAATACTTaGGGCAAATGGACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: RWPVSPDTPRRAPGMVRWSCINT*GKWTAA
Trigger: GGCAGCTGTCCATTTGCCCAAAGTATTAATGCAACT...CCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGAAACAGGCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp CCTGCCCAATTCTCTCAGCCTGGCCAGGGACCAAGGCCGGGTTTTGGGGCGGACAGTTGCATTAATACTTaGGGCAAATGGACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PAQFSQPGQGPRPGFGADSCINT*GKWTAA
Trigger: GGCAGCTGTCCATTTGCCCAAAGTATTAATGCAACT...GTCCGCCCCAAAACCCGGCCTTGGTCCCTGGCCAGGCTGAGAGAATTGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGGCAAGCATGGAGGCTaGGGGTCGCCGTCGATGCCC +
Preference number: 5 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGGKHGG*GSPSMP
Trigger: GGGCATCGACGGCGACCCCAAGCCTCCATGCTTGCC...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCTGCTGCGAGAAATACTaGAAGAGCTCGGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRCCEKY*KSSGVA
Trigger: GGCCACCCCCGAGCTCTTCAAGTATTTCTCGCAGCA...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTCTCAGCTCCGCCAGGTaGGGCAGCAGCTGCGAGATG +
Preference number: 5 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGLSSAR*GSSCEM
Trigger: CATCTCGCAGCTGCTGCCCAACCTGGCGGAGCTGAG...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS-3UTR CAA 90 bp TCCCCTGACACCCCTCGGAGGGCTCCAGGTATGGTGCGGTGGAAGATGCAGGAATTCCTCCTACAGTCGTaGGAAATATCACAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: SPDTPRRAPGMVRWKMQEFLLQS*EISQLQ
Trigger: CTGAAGCTGTGATATTTCCAACGACTGTAGGAGGAA...TTCCTGCATCTTCCACCGCACCATACCTGGAGCCCTCCGAGGGGTGTCAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCTACCAGAAGAGCCCATaGAGGATCTTCTCGTCCGTG +
Preference number: 5 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRYQKSP*RIFSSV
Trigger: CACGGACGAGAAGATCCTCAATGGGCTCTTCTGGTA...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp CTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTGTGGGCGCTTGAGGCTCATGGCTTaGACACCCTTCTTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: LVTLFQPDRECPKIGCGRLRLMA*TPFLES
Trigger: GCTCTCCAAGAAGGGTGTCAAAGCCATGAGCCTCAA...GCGCCCACACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp AGGACTTCCAAATGTCTCGGGCCGACAGAGCACGGTCAGAGCCCATTTGGGCAGTTCCTCCTACAGTCGTaGGAAATATCACAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: RTSKCLGPTEHGQSPFGQFLLQS*EISQLQ
Trigger: CTGAAGCTGTGATATTTCCAACGACTGTAGGAGGAA...CTGCCCAAATGGGCTCTGACCGTGCTCTGTCGGCCCGAGACATTTGGAAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp TCTCTCTCTCACTCTCTGGCTCTCTGGAAACTGGTTACTCTCTTCCAACCAGATTGCTGCGAGAAATACTaGAAGAGCTCGGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: SLSHSLALWKLVTLFQPDCCEKY*KSSGVA
Trigger: GGCCACCCCCGAGCTCTTCAAGTATTTCTCGCAGCA...ATCTGGTTGGAAGAGAGTAACCAGTTTCCAGAGAGCCAGAGAGTGAGAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp TCTGGAAACTGGTTACTCTCTTCCAACCAGATAGGGAGTGTCCCAAGATTGGGTTTGAGGCTCATGGCTTaGACACCCTTCTTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: SGNWLLSSNQIGSVPRLGLRLMA*TPFLES
Trigger: GCTCTCCAAGAAGGGTGTCAAAGCCATGAGCCTCAA...ACCCAATCTTGGGACACTCCCTATCTGGTTGGAAGAGAGTAACCAGTTTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS-3UTR CAA 90 bp GTCGTTGGAAATATCACAGCTTCAGTTGCATTAATACTTTGGGCAAATGGACAGGCCTCGGTGAAGTCGTaGCAGCCCGACAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VVGNITASVALILWANGQASVKS*QPDSSR
Trigger: TCTGGAGCTGTCGGGCTGCAACGACTTCACCGAGGC...CTGTCCATTTGCCCAAAGTATTAATGCAACTGAAGCTGTGATATTTCCAACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CCA 72 bp CTCATGCCACGCTGTCCGCCGGGCGACCTCCCGTCATaGGGAGCCCGGCATGGGCGTCGGCGCGCGGGGGCC +
Preference number: 6 (lower is better)
Translates to: LMPRCPPGDLPS*GARHGRRRAGA
Trigger: GGCCCCCGCGCGCCGACGCCCATGCCGGGCTCCCCATGACGGGAGGTCGCCCGGCGGACAGCGTGGCATGAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397621.6
CDS TCA 72 bp GGCAGGGGCGGTTCTTGGTGGCTGGCGTGCCCTTGGTaGTGCTGGCCGCACCCAGGCCGTTGGGCTGGCCCG +
Preference number: 6 (lower is better)
Translates to: GRGGSWWLACPW*CWPHPGRWAGP
Trigger: CGGGCCAGCCCAACGGCCTGGGTGCGGCCAGCATCACCAAGGGCACGCCAGCCACCAAGAACCGCCCCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 72 bp CTTCCTGGCACGCTCTCGGCCCGGGCTCCTGGCTCATaGCACGCTGTCCGCCGGGCGACCTCCCGTCATGGG +
Preference number: 6 (lower is better)
Translates to: LPGTLSARAPGS*HAVRRATSRHG
Trigger: CCCATGACGGGAGGTCGCCCGGCGGACAGCGTGGCATGAGCCAGGAGCCCGGGCCGAGAGCGTGCCAGGAAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 72 bp TTCTCGTCCGTGGCCAGCGGCGGCCGCTCCGCTGGGTaGCCAGGTGCCAAGGCTGAGGCTGGTCCACCTGCC +
Preference number: 6 (lower is better)
Translates to: FSSVASGGRSAG*PGAKAEAGPPA
Trigger: GGCAGGTGGACCAGCCTCAGCCTTGGCACCTGGGCACCCAGCGGAGCGGCCGCCGCTGGCCACGGACGAGAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CAA 90 bp GGTGGTGGGAGGGTGGGTGGGGGTGGTGGCTGGCAGGGGCGGTTCTaGGTGGCTGGCGTGCCCTTGGTGATGCTGGCCGCACCCAGGCCG +
Preference number: 6 (lower is better)
Translates to: GGGRVGGGGGWQGRF*VAGVPLVMLAAPRP
Trigger: CGGCCTGGGTGCGGCCAGCATCACCAAGGGCACGCCAGCCACCAAGAACCGCCCCTGCCAGCCACCACCCCCACCCACCCTCCCACCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 72 bp CCACCCACCGGGAAGGACGGGGGTCCAGCCAACCCGTaGTGCGGTTCTGCGGTTCCCACTCCCCAGGCTCCG +
Preference number: 6 (lower is better)
Translates to: PPTGKDGGPANP*CGSAVPTPQAP
Trigger: CGGAGCCTGGGGAGTGGGAACCGCAGAACCGCAGCACGGGTTGGCTGGACCCCCGTCCTTCCCGGTGGGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562648.2
CDS CCA 72 bp TCGACATCTTCCTGGCACGCTCTCGGCCCGGGCTCCTaGCTCATGCCACGCTGTCCGCCGGGCGACCTCCCG +
Preference number: 6 (lower is better)
Translates to: STSSWHALGPGS*LMPRCPPGDLP
Trigger: CGGGAGGTCGCCCGGCGGACAGCGTGGCATGAGCCAGGAGCCCGGGCCGAGAGCGTGCCAGGAAGATGTCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CCA 72 bp TGGGGGTGGTGGCTGGCAGGGGCGGTTCTTGGTGGCTaGCGTGCCCTTGGTGATGCTGGCCGCACCCAGGCC +
Preference number: 6 (lower is better)
Translates to: WGWWLAGAVLGG*RALGDAGRTQA
Trigger: GGCCTGGGTGCGGCCAGCATCACCAAGGGCACGCCAGCCACCAAGAACCGCCCCTGCCAGCCACCACCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CCA 72 bp CAGTGGAGCAGCCAGGCTGGGTGGTGGGAGGGTGGGTaGGGGTGGTGGCTGGCAGGGGCGGTTCTTGGTGGC +
Preference number: 6 (lower is better)
Translates to: QWSSQAGWWEGG*GWWLAGAVLGG
Trigger: GCCACCAAGAACCGCCCCTGCCAGCCACCACCCCCACCCACCCTCCCACCACCCAGCCTGGCTGCTCCACTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CAA 72 bp GGCTGGCAGGGGCGGTTCTTGGTGGCTGGCGTGCCCTaGGTGATGCTGGCCGCACCCAGGCCGTTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: GWQGRFLVAGVP*VMLAAPRPLGW
Trigger: CCAGCCCAACGGCCTGGGTGCGGCCAGCATCACCAAGGGCACGCCAGCCACCAAGAACCGCCCCTGCCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 72 bp GCCTGCAGGCTCAGCTCCGCCAGGTTGGGCAGCAGCTaGGAGATGGCCGCGATGGCGTCGTCGGCCACGTTG +
Preference number: 6 (lower is better)
Translates to: ACRLSSARLGSS*EMAAMASSATL
Trigger: CAACGTGGCCGACGACGCCATCGCGGCCATCTCGCAGCTGCTGCCCAACCTGGCGGAGCTGAGCCTGCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS GCA 72 bp GAAGGACGGGGGTCCAGCCAACCCGTGCTGCGGTTCTaGGGTTCCCACTCCCCAGGCTCCGAGGGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: EGRGSSQPVLRF*GSHSPGSEGSA
Trigger: GGCAGAGCCCTCGGAGCCTGGGGAGTGGGAACCGCAGAACCGCAGCACGGGTTGGCTGGACCCCCGTCCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562648.2
CDS TCA 72 bp TGCGCGCGCTCAGGCTGGACCACAGCCCGGCCTCGGTaGAGTCGTTGCAGCCCGACAGCTCCAGACGCACCA +
Preference number: 6 (lower is better)
Translates to: CARSGWTTARPR*SRCSPTAPDAP
Trigger: TGGTGCGTCTGGAGCTGTCGGGCTGCAACGACTTCACCGAGGCCGGGCTGTGGTCCAGCCTGAGCGCGCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS GCA 72 bp GGCGCGCACCTGTCGAGCACGAGCTCCTCTAGGCGGTaGAGGTCGCAGGCCACGTACTCCAGCGCCATGTCG +
Preference number: 6 (lower is better)
Translates to: GAHLSSTSSSRR*RSQATYSSAMS
Trigger: CGACATGGCGCTGGAGTACGTGGCCTGCGACCTGCACCGCCTAGAGGAGCTCGTGCTCGACAGGTGCGCGCC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562648.2
CDS GCA 72 bp TCACCTGGCCCCGGCCATCCCTCGTCTTCCTGGGAGTaGCCCTGGCGTGAATCCCTTCCTGCCCCACCCGGA +
Preference number: 6 (lower is better)
Translates to: SPGPGHPSSSWE*PWRESLPAPPG
Trigger: TCCGGGTGGGGCAGGAAGGGATTCACGCCAGGGGCACTCCCAGGAAGACGAGGGATGGCCGGGGCCAGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562648.2
CDS CCA 72 bp TGCAGCACCGGCGTGAGGCCTGCCCAGAACTTGGGCTaGTACAGCACGCGCCGCCAGGCCTTGCACACCTGG +
Preference number: 6 (lower is better)
Translates to: CSTGVRPAQNLG*YSTRRQALHTW
Trigger: CCAGGTGTGCAAGGCCTGGCGGCGCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCCTCACGCCGGTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CAA 72 bp GGCGTGCCCTTGGTGATGCTGGCCGCACCCAGGCCGTaGGGCTGGCCCGGCAGCTTCACCAGACCGTTTCGA +
Preference number: 6 (lower is better)
Translates to: GVPLVMLAAPRP*GWPGSFTRPFR
Trigger: TCGAAACGGTCTGGTGAAGCTGCCGGGCCAGCCCAACGGCCTGGGTGCGGCCAGCATCACCAAGGGCACGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CAA 72 bp CTCAGGCTGGACCACAGCCCGGCCTCGGTGAAGTCGTaGCAGCCCGACAGCTCCAGACGCACCACGCCCTGC +
Preference number: 6 (lower is better)
Translates to: LRLDHSPASVKS*QPDSSRRTTPC
Trigger: GCAGGGCGTGGTGCGTCTGGAGCTGTCGGGCTGCAACGACTTCACCGAGGCCGGGCTGTGGTCCAGCCTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS GCA 72 bp TGCGTGGGCACCACGAGAGGTCAAGGCTGCGCAGCTTaGGCAGGTTCTCGGCCACGAGCTCCACGCCGTCGT +
Preference number: 6 (lower is better)
Translates to: CVGTTRGQGCAA*AGSRPRAPRRR
Trigger: ACGACGGCGTGGAGCTCGTGGCCGAGAACCTGCGCAAGCTGCGCAGCCTTGACCTCTCGTGGTGCCCACGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS CCA 72 bp GCCCGGCAGCTTCACCAGACCGTTTCGAGGCAAGCATaGAGGCTTGGGGTCGCCGTCGATGCCCGGGCTCGA +
Preference number: 6 (lower is better)
Translates to: ARQLHQTVSRQA*RLGVAVDARAR
Trigger: TCGAGCCCGGGCATCGACGGCGACCCCAAGCCTCCATGCTTGCCTCGAAACGGTCTGGTGAAGCTGCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CAA 72 bp TTGGCATGCAGCACCGGCGTGAGGCCTGCCCAGAACTaGGGCTGGTACAGCACGCGCCGCCAGGCCTTGCAC +
Preference number: 6 (lower is better)
Translates to: LACSTGVRPAQN*GWYSTRRQALH
Trigger: GTGCAAGGCCTGGCGGCGCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCCTCACGCCGGTGCTGCATGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CAA 72 bp ATGCGTGGGCACCACGAGAGGTCAAGGCTGCGCAGCTaGCGCAGGTTCTCGGCCACGAGCTCCACGCCGTCG +
Preference number: 6 (lower is better)
Translates to: MRGHHERSRLRS*RRFSATSSTPS
Trigger: CGACGGCGTGGAGCTCGTGGCCGAGAACCTGCGCAAGCTGCGCAGCCTTGACCTCTCGTGGTGCCCACGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS CAA 90 bp TGGCCCGGCAGCTTCACCAGACCGTTTCGAGGCAAGCATGGAGGCTaGGGGTCGCCGTCGATGCCCGGGCTCGACATCTTCCTGGCACGC +
Preference number: 6 (lower is better)
Translates to: WPGSFTRPFRGKHGG*GSPSMPGLDIFLAR
Trigger: GCGTGCCAGGAAGATGTCGAGCCCGGGCATCGACGGCGACCCCAAGCCTCCATGCTTGCCTCGAAACGGTCTGGTGAAGCTGCCGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CAA 90 bp TTGGTGGCTGGCGTGCCCTTGGTGATGCTGGCCGCACCCAGGCCGTaGGGCTGGCCCGGCAGCTTCACCAGACCGTTTCGAGGCAAGCAT +
Preference number: 6 (lower is better)
Translates to: LVAGVPLVMLAAPRP*GWPGSFTRPFRGKH
Trigger: ATGCTTGCCTCGAAACGGTCTGGTGAAGCTGCCGGGCCAGCCCAACGGCCTGGGTGCGGCCAGCATCACCAAGGGCACGCCAGCCACCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CAA 90 bp ATGCGCGCGCTCAGGCTGGACCACAGCCCGGCCTCGGTGAAGTCGTaGCAGCCCGACAGCTCCAGACGCACCACGCCCTGCATCTGTTCA +
Preference number: 6 (lower is better)
Translates to: MRALRLDHSPASVKS*QPDSSRRTTPCICS
Trigger: TGAACAGATGCAGGGCGTGGTGCGTCTGGAGCTGTCGGGCTGCAACGACTTCACCGAGGCCGGGCTGTGGTCCAGCCTGAGCGCGCGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS CAA 90 bp TTGGGCAGCAGCTGCGAGATGGCCGCGATGGCGTCGTCGGCCACGTaGATGCAGTCACTCACGCTCAGCGAGGTGATGCGCGCGCTCAGG +
Preference number: 6 (lower is better)
Translates to: LGSSCEMAAMASSAT*MQSLTLSEVMRALR
Trigger: CCTGAGCGCGCGCATCACCTCGCTGAGCGTGAGTGACTGCATCAACGTGGCCGACGACGCCATCGCGGCCATCTCGCAGCTGCTGCCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS CAA 90 bp ATGTCGGTGATGCGTGGGCACCACGAGAGGTCAAGGCTGCGCAGCTaGCGCAGGTTCTCGGCCACGAGCTCCACGCCGTCGTCGGTGACC +
Preference number: 6 (lower is better)
Translates to: MSVMRGHHERSRLRS*RRFSATSSTPSSVT
Trigger: GGTCACCGACGACGGCGTGGAGCTCGTGGCCGAGAACCTGCGCAAGCTGCGCAGCCTTGACCTCTCGTGGTGCCCACGCATCACCGACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS TCA 72 bp GCAGGTCGCAGGCCACGTACTCCAGCGCCATGTCGGTaGTGCGTGGGCACCACGAGAGGTCAAGGCTGCGCA +
Preference number: 6 (lower is better)
Translates to: AGRRPRTPAPCR*CVGTTRGQGCA
Trigger: TGCGCAGCCTTGACCTCTCGTGGTGCCCACGCATCACCGACATGGCGCTGGAGTACGTGGCCTGCGACCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
ENST00000562648.2
CDS GCA 72 bp TTCGAGGCAAGCATGGAGGCTTGGGGTCGCCGTCGATaGCCGGGCTCGACATCTTCCTGGCACGCTCTCGGC +
Preference number: 6 (lower is better)
Translates to: FEASMEAWGRRR*PGSTSSWHALG
Trigger: GCCGAGAGCGTGCCAGGAAGATGTCGAGCCCGGGCATCGACGGCGACCCCAAGCCTCCATGCTTGCCTCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 72 bp GTAGAGCTCCTTGGCATGCAGCACCGGCGTGAGGCCTaGCCAGAACTTGGGCTGGTACAGCACGCGCCGCCA +
Preference number: 6 (lower is better)
Translates to: VELLGMQHRREA*PELGLVQHAPP
Trigger: TGGCGGCGCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCCTCACGCCGGTGCTGCATGCCAAGGAGCTCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 72 bp CCCGAGAGGCTGAGCGCGGTGAGGTTGGGCAGGCTGTaGACCACGTTGACCACGCCGTGGTTGGTGATCTCC +
Preference number: 6 (lower is better)
Translates to: PERLSAVRLGRL*TTLTTPWLVIS
Trigger: GGAGATCACCAACCACGGCGTGGTCAACGTGGTGCACAGCCTGCCCAACCTCACCGCGCTCAGCCTCTCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS CCA 72 bp GCAGGCCACGTACTCCAGCGCCATGTCGGTGATGCGTaGGCACCACGAGAGGTCAAGGCTGCGCAGCTTGCG +
Preference number: 6 (lower is better)
Translates to: AGHVLQRHVGDA*APREVKAAQLA
Trigger: CGCAAGCTGCGCAGCCTTGACCTCTCGTGGTGCCCACGCATCACCGACATGGCGCTGGAGTACGTGGCCTGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
ENST00000562648.2
CDS TCA 72 bp GAGGATCGGCCGCCCCAAGCCTCCCACCGGGGAGGCTaGGGCTGTGCCCAGATAAATAAGGCCGCTTTGCAG +
Preference number: 6 (lower is better)
Translates to: EDRPPQASHRGG*GCAQINKAALQ
Trigger: CTGCAAAGCGGCCTTATTTATCTGGGCACAGCCTCAGCCTCCCCGGTGGGAGGCTTGGGGCGGCCGATCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 72 bp CGTACACACCTGTCGAGCACGAGCTCCTCTAGGCGGTaGAGGTCGCAGGCCACGTACTCCAGCGCCATGTCG +
Preference number: 6 (lower is better)
Translates to: RTHLSSTSSSRR*RSQATYSSAMS
Trigger: CGACATGGCGCTGGAGTACGTGGCCTGCGACCTGCACCGCCTAGAGGAGCTCGTGCTCGACAGGTGTGTACG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS GCA 72 bp AGACGCACCACGCCCTGCATCTGTTCAAGCATAACCTaGAGGCGGGCGGGCGCCGGGTCAGGATTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: RRTTPCICSSIT*RRAGAGSGLQE
Trigger: CTCCTGCAATCCTGACCCGGCGCCCGCCCGCCTGCAGGTTATGCTTGAACAGATGCAGGGCGTGGTGCGTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562563.1
CDS GCA 72 bp TCGTTGCAGCCCGACAGCTCCAGACGCACCACGCCCTaGATCTGTTCAAGCATAACCTGCAGGCGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: SLQPDSSRRTTP*ICSSITCRRAG
Trigger: GCCCGCCCGCCTGCAGGTTATGCTTGAACAGATGCAGGGCGTGGTGCGTCTGGAGCTGTCGGGCTGCAACGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562563.1
CDS CCA 72 bp GGCTGGTACAGCACGCGCCGCCAGGCCTTGCACACCTaGGCCAGCACACACTTCTCGCAGGCCGAGAAATAC +
Preference number: 6 (lower is better)
Translates to: GWYSTRRQALHT*ASTHFSQAEKY
Trigger: GTATTTCTCGGCCTGCGAGAAGTGTGTGCTGGCCCAGGTGTGCAAGGCCTGGCGGCGCGTGCTGTACCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CAA 72 bp AGCTGCGAGATGGCCGCGATGGCGTCGTCGGCCACGTaGATGCAGTCACTCACGCTCAGCGAGGTGATGCGC +
Preference number: 6 (lower is better)
Translates to: SCEMAAMASSAT*MQSLTLSEVMR
Trigger: GCGCATCACCTCGCTGAGCGTGAGTGACTGCATCAACGTGGCCGACGACGCCATCGCGGCCATCTCGCAGCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
CDS CAA 90 bp GCCAGCACACACTTCTCGCAGGCCGAGAAATACCAGAAGAGCCCATaGAGGATCTTCTCGTCCGTGGCCAGCGGCGGCCGCTCCGCTGGG +
Preference number: 6 (lower is better)
Translates to: ASTHFSQAEKYQKSP*RIFSSVASGGRSAG
Trigger: CCCAGCGGAGCGGCCGCCGCTGGCCACGGACGAGAAGATCCTCAATGGGCTCTTCTGGTATTTCTCGGCCTGCGAGAAGTGTGTGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CAA 90 bp AGGCCTGCCCAGAACTTGGGCTGGTACAGCACGCGCCGCCAGGCCTaGCACACCTGGGCCAGCACACACTTCTCGCAGGCCGAGAAATAC +
Preference number: 6 (lower is better)
Translates to: RPAQNLGWYSTRRQA*HTWASTHFSQAEKY
Trigger: GTATTTCTCGGCCTGCGAGAAGTGTGTGCTGGCCCAGGTGTGCAAGGCCTGGCGGCGCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS TCA 72 bp GCACGTTGTAGAGCTCCTTGGCATGCAGCACCGGCGTaGGGCCTGCCCAGAACTTGGGCTGGTACAGCACGC +
Preference number: 6 (lower is better)
Translates to: ARCRAPWHAAPA*GLPRTWAGTAR
Trigger: GCGTGCTGTACCAGCCCAAGTTCTGGGCAGGCCTCACGCCGGTGCTGCATGCCAAGGAGCTCTACAACGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 72 bp GCCTCGCGCTACTCAATGACGAGGCAGCGGGGCAGGTaGTGCGAGAAATACTTGAAGAGCTCGGGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: ASRYSMTRQRGR*CEKYLKSSGVA
Trigger: GGCCACCCCCGAGCTCTTCAAGTATTTCTCGCAGCACCTGCCCCGCTGCCTCGTCATTGAGTAGCGCGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324361.9
ENST00000397621.6
ENST00000562563.1
ENST00000562648.2
CDS CCA 72 bp GCTTCACCAGACCGTTTCGAGGCAAGCATGGAGGCTTaGGGTCGCCGTCGATGCCCGGGCTCGACATCTTCC +
Preference number: 6 (lower is better)
Translates to: ASPDRFEASMEA*GRRRCPGSTSS
Trigger: GGAAGATGTCGAGCCCGGGCATCGACGGCGACCCCAAGCCTCCATGCTTGCCTCGAAACGGTCTGGTGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 72 bp AGGCAGAAGCCCTCGAAGCCTCTGGCGGCAAAACCCTaGAGGTTCACGAACTCCTTCTCGCCACCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: RQKPSKPLAAKP*RFTNSFSPPGS
Trigger: GCTGCCTGGTGGCGAGAAGGAGTTCGTGAACCTGCAGGGTTTTGCCGCCAGAGGCTTCGAGGGCTTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS GCA 72 bp TCGTTGCAGCCCGACAGCTCCAGACGCACCACGCCCTaGATCTGTTCAAGCATAACCTCGAGGCCTGCGTCC +
Preference number: 6 (lower is better)
Translates to: SLQPDSSRRTTP*ICSSITSRPAS
Trigger: GGACGCAGGCCTCGAGGTTATGCTTGAACAGATGCAGGGCGTGGTGCGTCTGGAGCTGTCGGGCTGCAACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CAA 72 bp AGCTTCACCAGACCGTTTCGAGGCAAGCATGGAGGCTaGGGGTCGCCGTCGATGCCCGGGCTCGACATCTTC +
Preference number: 6 (lower is better)
Translates to: SFTRPFRGKHGG*GSPSMPGLDIF
Trigger: GAAGATGTCGAGCCCGGGCATCGACGGCGACCCCAAGCCTCCATGCTTGCCTCGAAACGGTCTGGTGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CAA 72 bp CACTTCTCGCAGGCCGAGAAATACCAGAAGAGCCCATaGAGGATCTTCTCGTCCGTGGCCAGCGGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: HFSQAEKYQKSP*RIFSSVASGGR
Trigger: GCGGCCGCCGCTGGCCACGGACGAGAAGATCCTCAATGGGCTCTTCTGGTATTTCTCGGCCTGCGAGAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS TCA 72 bp ACTTCTCGCAGGCCGAGAAATACCAGAAGAGCCCATTaGGGATCTTCTCGTCCGTGGCCAGCGGCGGCCGCT +
Preference number: 6 (lower is better)
Translates to: TSRRPRNTRRAH*GSSRPWPAAAA
Trigger: AGCGGCCGCCGCTGGCCACGGACGAGAAGATCCTCAATGGGCTCTTCTGGTATTTCTCGGCCTGCGAGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6
CDS CAA 72 bp CTGAGGCCAGTGTCCGTGATGCGTACACACCTGTGGTaGCACCAGAGGGGACCCCCACCTTCAAATCACCTG +
Preference number: 6 (lower is better)
Translates to: LRPVSVMRTHLW*HQRGPPPSNHL
Trigger: CAGGTGATTTGAAGGTGGGGGTCCCCTCTGGTGCAACCACAGGTGTGTACGCATCACGGACACTGGCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562648.2
CDS CAA 72 bp ATAACCTCGAGGCCTGCGTCCGTGATGGTGGAGCGCTaGAGGCTCATGGCTTTGACACCCTTCTTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: ITSRPASVMVER*RLMALTPFLES
Trigger: GCTCTCCAAGAAGGGTGTCAAAGCCATGAGCCTCAAGCGCTCCACCATCACGGACGCAGGCCTCGAGGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324361.9
ENST00000397621.6