RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXL12 (Homo sapiens)

Ensembl gene IDs: ENSG00000127452

Ensembl transcript IDs: ENST00000247977.9, ENST00000586073.1, ENST00000586469.1, ENST00000586651.5, ENST00000588922.5, ENST00000589438.1, ENST00000589626.5, ENST00000590277.1, ENST00000590808.1, ENST00000592067.1, ENST00000592732.5

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATG +
Preference number: 1 (lower is better)
Translates to: PPSTSERKARKRVRP*RCSSRKAGTRSSTM
Trigger: CATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR GCA 90 bp AGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCA +
Preference number: 1 (lower is better)
Translates to: STSERKARKRVRPCR*SSRKAGTRSSTMHS
Trigger: TGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR TCA 90 bp AGCACTTTGGAAGGCCGATGCGGGCGGATCACGAGGTCAGGAGATTaGGACCATCCTGGCCAACATGACAAAACCCCGTTTCGTGTAGAG +
Preference number: 1 (lower is better)
Translates to: STLEGRCGRITRSGD*DHPGQHDKTPFRVE
Trigger: CTCTACACGAAACGGGGTTTTGTCATGTTGGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCATCGGCCTTCCAAAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589438.1
3UTR-3UTR GCA 90 bp GCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: ARQALQVLVTEGGDAVQHVRPCR*SSRKAG
Trigger: CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGAC...GTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR GCA 90 bp ACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: TQHQRAQGPEARQALQVLVRPCR*SSRKAG
Trigger: CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGAC...GAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR GCA 90 bp GTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: VPPSTSERKARKRVRPCRVRPCR*SSRKAG
Trigger: CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGAC...CCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR GCA 90 bp GGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAG +
Preference number: 2 (lower is better)
Translates to: GPEARQALQVLVTEGGDAKRVRP*RCSSRK
Trigger: CTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT...CGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR CCA 90 bp CGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGAGAGCAGGGGACAACTaGGGGGCCTGGGAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: RVRPCRCSSRKAGTRSSTRAGDN*GAWEPE
Trigger: CTCTGGCTCCCAGGCCCCCCAGTTGTCCCCTGCTCT...CGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR TCA 90 bp AGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCTGCTGGGCAGGCTGGTaGTGGGCACCATGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: RPGSASGPAGARHGRRGRCWAGW*WAPCSG
Trigger: ACCTGAGCATGGTGCCCATCACCAGCCTGCCCAGCA...GCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR GCA 90 bp ACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: TVGTTQHQRAQGPEARQAVRPCR*SSRKAG
Trigger: CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGAC...GGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR CCA 90 bp CAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCAGAGCAGGGGACAACTaGGGGGCCTGGGAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: QHQRAQGPEARQALQVLVRAGDN*GAWEPE
Trigger: CTCTGGCTCCCAGGCCCCCCAGTTGTCCCCTGCTCT...GACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR CCA 90 bp ACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGAGAGCAGGGGACAACTaGGGGGCCTGGGAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: TTQHQRAQGPEARQALQVRAGDN*GAWEPE
Trigger: CTCTGGCTCCCAGGCCCCCCAGTTGTCCCCTGCTCT...CACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR TCA 90 bp GGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCATGCTGGGCAGGCTGGTaGTGGGCACCATGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: GSASGPAGARHGRRGRGPCWAGW*WAPCSG
Trigger: ACCTGAGCATGGTGCCCATCACCAGCCTGCCCAGCA...TGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR TCA 90 bp CACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTTGCTGGGCAGGCTGGTaGTGGGCACCATGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: HPAPASARPGSASGPAGACWAGW*WAPCSG
Trigger: ACCTGAGCATGGTGCCCATCACCAGCCTGCCCAGCA...AGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR GCA 90 bp GCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGAAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAG +
Preference number: 2 (lower is better)
Translates to: ASGPAGARHGRRGRGPARKRVRP*RCSSRK
Trigger: CTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT...TCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR CCA 90 bp GTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGAGAGCAGGGGACAACTaGGGGGCCTGGGAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: VGTTQHQRAQGPEARQALRAGDN*GAWEPE
Trigger: CTCTGGCTCCCAGGCCCCCCAGTTGTCCCCTGCTCT...CAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR TCA 90 bp GTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGTGCTGGGCAGGCTGGTaGTGGGCACCATGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: VGTTQHQRAQGPEARQALCWAGW*WAPCSG
Trigger: ACCTGAGCATGGTGCCCATCACCAGCCTGCCCAGCA...CAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR CCA 90 bp AGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATAGAGCAGGGGACAACTaGGGGGCCTGGGAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: RPCRCSSRKAGTRSSTMHRAGDN*GAWEPE
Trigger: CTCTGGCTCCCAGGCCCCCCAGTTGTCCCCTGCTCT...ATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR CCA 90 bp GGTCACACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTAGAGCAGGGGACAACTaGGGGGCCTGGGAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: GHTVGTTQHQRAQGPEARRAGDN*GAWEPE
Trigger: CTCTGGCTCCCAGGCCCCCCAGTTGTCCCCTGCTCT...ACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTGTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR TCA 90 bp CCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCCAGAGGCTGATGATATaGCCAAGGCCACACAGCTGG +
Preference number: 2 (lower is better)
Translates to: PPSTSERKARKRVRPCRCQRLMI*PRPHSW
Trigger: CCAGCTGTGTGGCCTTGGTCATATCATCAGCCTCTG...GCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR GCA 90 bp GGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGATTGAATCGCGAGTCTaGATCGCCTATCTCTCCGCG +
Preference number: 2 (lower is better)
Translates to: GPEARQALQVLVTEGGDAIESRV*IAYLSA
Trigger: CGCGGAGAGATAGGCGATGCAGACTCGCGATTCAAT...CGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR GCA 90 bp GCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGAACTTTGGAAGGCCGATaGGGGCGGATCACGAGGTCA +
Preference number: 2 (lower is better)
Translates to: ASGPAGARHGRRGRGPARTLEGR*GRITRS
Trigger: TGACCTCGTGATCCGCCCGCATCGGCCTTCCAAAGT...TCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
3UTR-3UTR TCA 90 bp TGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCTGCTGGGCAGGCTGGTaGTGGGCACCATGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: CSSRKAGTRSSTMHSSRGCWAGW*WAPCSG
Trigger: ACCTGAGCATGGTGCCCATCACCAGCCTGCCCAGCA...GCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR GCA 90 bp GCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGGGAATGGAGCCGGGATaGCATGTACCTTCGAAGGAG +
Preference number: 2 (lower is better)
Translates to: ASARPGSASGPAGARHGRGMEPG*HVPSKE
Trigger: CTCCTTCGAAGGTACATGGCATCCCGGCTCCATTCC...CCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR GCA 90 bp CTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAGAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAG +
Preference number: 2 (lower is better)
Translates to: LVTEGGDAVQHDAFKQGQKRVRP*RCSSRK
Trigger: CTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT...CTGCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR TCA 90 bp CTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGTGCTGGGCAGGCTGGTaGTGGGCACCATGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: LQVLVTEGGDAVQHDAFKCWAGW*WAPCSG
Trigger: ACCTGAGCATGGTGCCCATCACCAGCCTGCCCAGCA...CTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR GCA 90 bp CACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCGGAATGGAGCCGGGATaGCATGTACCTTCGAAGGAG +
Preference number: 2 (lower is better)
Translates to: HGRYHPAPASARPGSASGGMEPG*HVPSKE
Trigger: CTCCTTCGAAGGTACATGGCATCCCGGCTCCATTCC...GCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR GCA 90 bp CTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAG +
Preference number: 2 (lower is better)
Translates to: LQVLVTEGGDAVQHDAFKKRVRP*RCSSRK
Trigger: CTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT...CTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR GCA 90 bp GGTCACACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTACTTTGGAAGGCCGATaGGGGCGGATCACGAGGTCA +
Preference number: 2 (lower is better)
Translates to: GHTVGTTQHQRAQGPEARTLEGR*GRITRS
Trigger: TGACCTCGTGATCCGCCCGCATCGGCCTTCCAAAGT...ACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589438.1
3UTR-3UTR CCA 90 bp AGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCCCAAGGCCACACAGCTaGCAAACAGTGATTCCAATG +
Preference number: 2 (lower is better)
Translates to: RPGSASGPAGARHGRRGRPRPHS*QTVIPM
Trigger: CATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG...GCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp CCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCCCAAGGCCACACAGCTaGCAAACAGTGATTCCAATG +
Preference number: 2 (lower is better)
Translates to: PPSTSERKARKRVRPCRCPRPHS*QTVIPM
Trigger: CATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG...GCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR GCA 90 bp GGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTATTGAATCGCGAGTCTaGATCGCCTATCTCTCCGCG +
Preference number: 2 (lower is better)
Translates to: GRYHPAPASARPGSASGPIESRV*IAYLSA
Trigger: CGCGGAGAGATAGGCGATGCAGACTCGCGATTCAAT...AGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR GCA 90 bp GCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACTACCTTCGAAGGAGGTaGCACATGACTTTAGGTCGC +
Preference number: 2 (lower is better)
Translates to: APASARPGSASGPAGARHYLRRR*HMTLGR
Trigger: GCGACCTAAAGTCATGTGGCACCTCCTTCGAAGGTA...GTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586651.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR CCA 90 bp GCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGACTCAATGATGAAAACTaGGATGGGTCCCAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: ASGPAGARHGRRGRGPARLNDEN*DGSQGQ
Trigger: CTGCCCTTGGGACCCATCCCAGTTTTCATCATTGAG...TCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp ACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCCAAGGCCACACAGCTaGCAAACAGTGATTCCAATG +
Preference number: 2 (lower is better)
Translates to: TTQHQRAQGPEARQALQVPRPHS*QTVIPM
Trigger: CATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG...CACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp CACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTTCGCATAGTTCCACATaGCTGGGGAGGCCTCAAAAT +
Preference number: 2 (lower is better)
Translates to: HPAPASARPGSASGPAGASHSST*LGRPQN
Trigger: ATTTTGAGGCCTCCCCAGCCATGTGGAACTATGCGA...AGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
3UTR-3UTR TCA 90 bp TGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAAGGTGACTCTTCATTaGGAGCCTCTGGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: CSSRKAGTRSSTMHSSRGKVTLH*EPLEAG
Trigger: CCCAGCCTCCAGAGGCTCTCAATGAAGAGTCACCTT...GCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR TCA 90 bp TCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAGCGGCAGCAAGAGAAAATaGGAAAGAAGCCCGGGCGCA +
Preference number: 2 (lower is better)
Translates to: SSRKAGTRSSTMHSSRGSGSKRK*ERSPGA
Trigger: TGCGCCCGGGCTTCTTTCTCATTTTCTCTTGCTGCC...GCTGCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
3UTR-3UTR GCA 90 bp CACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCTACCTTCGAAGGAGGTaGCACATGACTTTAGGTCGC +
Preference number: 2 (lower is better)
Translates to: HGRYHPAPASARPGSASGYLRRR*HMTLGR
Trigger: GCGACCTAAAGTCATGTGGCACCTCCTTCGAAGGTA...GCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586651.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR GCA 90 bp TCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCTACCTTCGAAGGAGGTaGCACATGACTTTAGGTCGC +
Preference number: 2 (lower is better)
Translates to: SGPAGARHGRRGRGPARCYLRRR*HMTLGR
Trigger: GCGACCTAAAGTCATGTGGCACCTCCTTCGAAGGTA...GCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586651.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR CCA 90 bp GCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACTCTGTTCTCTCAACCTaGGGCTTTCAGTTTCCTCAA +
Preference number: 2 (lower is better)
Translates to: ARQALQVLVTEGGDAVQHSVLST*GFQFPQ
Trigger: TTGAGGAAACTGAAAGCCCCAGGTTGAGAGAACAGA...GTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp GGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCACCTTATTTCCAGATGTaGGAACTAGGCTTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: GSASGPAGARHGRRGRGPPYFQM*ELGFPE
Trigger: CTCTGGGAAGCCTAGTTCCCACATCTGGAAATAAGG...TGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp GCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCCTTATTTCCAGATGTaGGAACTAGGCTTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: ASARPGSASGPAGARHGRPYFQM*ELGFPE
Trigger: CTCTGGGAAGCCTAGTTCCCACATCTGGAAATAAGG...CCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp GCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAATAATCCCAGCACTTTaGAAGGCCGATGCGGGCGGA +
Preference number: 2 (lower is better)
Translates to: ARHGRRGRGPARCIQAGAIIPAL*KADAGG
Trigger: TCCGCCCGCATCGGCCTTCCAAAGTGCTGGGATTAT...TGCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
3UTR-3UTR CCA 90 bp TGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCATAATCCCAGCACTTTaGAAGGCCGATGCGGGCGGA +
Preference number: 2 (lower is better)
Translates to: CSSRKAGTRSSTMHSSRGIIPAL*KADAGG
Trigger: TCCGCCCGCATCGGCCTTCCAAAGTGCTGGGATTAT...GCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
3UTR-3UTR TCA 90 bp CTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGAGGCTGATGATATaGCCAAGGCCACACAGCTGG +
Preference number: 2 (lower is better)
Translates to: LQVLVTEGGDAVQHDAFKQRLMI*PRPHSW
Trigger: CCAGCTGTGTGGCCTTGGTCATATCATCAGCCTCTG...CTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR TCA 90 bp CTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGGGCAGCAAGAGAAAATaGGAAAGAAGCCCGGGCGCA +
Preference number: 2 (lower is better)
Translates to: LQVLVTEGGDAVQHDAFKGSKRK*ERSPGA
Trigger: TGCGCCCGGGCTTCTTTCTCATTTTCTCTTGCTGCC...CTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
3UTR-3UTR CCA 90 bp GGTCACACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCTCAATGATGAAAACTaGGATGGGTCCCAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: GHTVGTTQHQRAQGPEARLNDEN*DGSQGQ
Trigger: CTGCCCTTGGGACCCATCCCAGTTTTCATCATTGAG...ACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp CAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACTCTGTTCTCTCAACCTaGGGCTTTCAGTTTCCTCAA +
Preference number: 2 (lower is better)
Translates to: QGPEARQALQVLVTEGGDSVLST*GFQFPQ
Trigger: TTGAGGAAACTGAAAGCCCCAGGTTGAGAGAACAGA...GTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp CACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTTATTTCCAGATGTaGGAACTAGGCTTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: HGRYHPAPASARPGSASGPYFQM*ELGFPE
Trigger: CTCTGGGAAGCCTAGTTCCCACATCTGGAAATAAGG...GCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR GCA 90 bp GCCAGCATCCAGCCCTGTCTCGGTCACACGGTAGGTACCACCCAGCACCAGCGATACCTTCGAAGGAGGTaGCACATGACTTTAGGTCGC +
Preference number: 2 (lower is better)
Translates to: ASIQPCLGHTVGTTQHQRYLRRR*HMTLGR
Trigger: GCGACCTAAAGTCATGTGGCACCTCCTTCGAAGGTA...TCGCTGGTGCTGGGTGGTACCTACCGTGTGACCGAGACAGGGCTGGATGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000589438.1
ENST00000589626.5
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR CCA 90 bp TGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCCTCAATGATGAAAACTaGGATGGGTCCCAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: CRCSSRKAGTRSSTMHSSLNDEN*DGSQGQ
Trigger: CTGCCCTTGGGACCCATCCCAGTTTTCATCATTGAG...GCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp TGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCTCGCATAGTTCCACATaGCTGGGGAGGCCTCAAAAT +
Preference number: 2 (lower is better)
Translates to: CRCSSRKAGTRSSTMHSSSHSST*LGRPQN
Trigger: ATTTTGAGGCCTCCCCAGCCATGTGGAACTATGCGA...GCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
3UTR-3UTR GCA 90 bp CAGATGTGGGAACTAGGCTTCCCAGAGGCTGATGATATGACCAAGGCCACACAGTGTCGGCAGACAGGGTaGAGCCCAGCACCTCAAGCC +
Preference number: 2 (lower is better)
Translates to: QMWELGFPEADDMTKATQCRQTG*SPAPQA
Trigger: GGCTTGAGGTGCTGGGCTGCACCCTGTCTGCCGACA...CTGTGTGGCCTTGGTCATATCATCAGCCTCTGGGAAGCCTAGTTCCCACATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR GCA 90 bp CAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACTTTAGGTCGCATATCTaGCTTTTATTGCTGGATTTC +
Preference number: 2 (lower is better)
Translates to: QGPEARQALQVLVTEGGDFRSHI*LLLLDF
Trigger: GAAATCCAGCAATAAAAGGCAGATATGCGACCTAAA...GTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589626.5
3UTR-3UTR TCA 90 bp GCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCTCCGCGTCTCTTGAAGGTGACTCTTCATTaGGAGCCTCTGGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: AYRSLNRESASPISPRLLKVTLH*EPLEAG
Trigger: CCCAGCCTCCAGAGGCTCTCAATGAAGAGTCACCTT...CAAGAGACGCGGAGAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp GATTCCAATGGTCTGGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGGCTTTCCTCAATGATGAAAACTaGGATGGGTCCCAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: DSNGLEVPRPLFSQPGAFLNDEN*DGSQGQ
Trigger: CTGCCCTTGGGACCCATCCCAGTTTTCATCATTGAG...GAAAGCCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp AGTGATTCCAATGGTCTGGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGGCTGCTGCTCAGAGGGTCTaGGGCTCAATGATGAAAACT +
Preference number: 2 (lower is better)
Translates to: SDSNGLEVPRPLFSQPGAAAQRV*GSMMKT
Trigger: AGTTTTCATCATTGAGCCCCAGACCCTCTGAGCAGC...AGCCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp GAGGCTGATGATATGACCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTGGTCCCAAGGGCAGGTaGAGTAGTTACATCCACCAG +
Preference number: 2 (lower is better)
Translates to: EADDMTKATQLANSDSNGGPKGR*SSYIHQ
Trigger: CTGGTGGATGTAACTACTCCACCTGCCCTTGGGACC...ACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGGTCATATCATCAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR GCA 90 bp GAGGCTGATGATATGACCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTTACCTTCGAAGGAGGTaGCACATGACTTTAGGTCGC +
Preference number: 2 (lower is better)
Translates to: EADDMTKATQLANSDSNGYLRRR*HMTLGR
Trigger: GCGACCTAAAGTCATGTGGCACCTCCTTCGAAGGTA...ACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGGTCATATCATCAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586651.5
ENST00000589626.5
3UTR-3UTR TCA 90 bp AGCACTTTTATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCAAGGTGACTCTTCATTaGGAGCCTCTGGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: STFMSISIIESRVCIAYLKVTLH*EPLEAG
Trigger: CCCAGCCTCCAGAGGCTCTCAATGAAGAGTCACCTT...GAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCATAAAAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR GCA 90 bp AGCACTTTTATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCGGAATGGAGCCGGGATaGCATGTACCTTCGAAGGAG +
Preference number: 2 (lower is better)
Translates to: STFMSISIIESRVCIAYLGMEPG*HVPSKE
Trigger: CTCCTTCGAAGGTACATGGCATCCCGGCTCCATTCC...GAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCATAAAAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp GCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCTCCGCGTCTCTTGTCTGTTCTCTCAACCTaGGGCTTTCAGTTTCCTCAA +
Preference number: 2 (lower is better)
Translates to: AYRSLNRESASPISPRLLSVLST*GFQFPQ
Trigger: TTGAGGAAACTGAAAGCCCCAGGTTGAGAGAACAGA...CAAGAGACGCGGAGAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp GAGGCTGATGATATGACCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTTCTGTTCTCTCAACCTaGGGCTTTCAGTTTCCTCAA +
Preference number: 2 (lower is better)
Translates to: EADDMTKATQLANSDSNGSVLST*GFQFPQ
Trigger: TTGAGGAAACTGAAAGCCCCAGGTTGAGAGAACAGA...ACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGGTCATATCATCAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR-3UTR CCA 90 bp AGCACTTTTATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCCCTTATTTCCAGATGTaGGAACTAGGCTTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: STFMSISIIESRVCIAYLPYFQM*ELGFPE
Trigger: CTCTGGGAAGCCTAGTTCCCACATCTGGAAATAAGG...GAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCATAAAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR GCA 72 bp GAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGGACGCGGTCCAGCACG +
Preference number: 3 (lower is better)
Translates to: ERKARKRVRPCR*SSRKAGTRSST
Trigger: CGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR GCA 72 bp ACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCC +
Preference number: 3 (lower is better)
Translates to: TSERKARKRVRP*RCSSRKAGTRS
Trigger: GGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR-3UTR CAA 90 bp GGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCACATAATCCCAGCACTTaGGAAGGCCGATGCGGGCGG +
Preference number: 3 (lower is better)
Translates to: GSASGPAGARHGRRGRGPHNPST*EGRCGR
Trigger: CCGCCCGCATCGGCCTTCCAAAGTGCTGGGATTATG...TGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
3UTR-3UTR CAA 90 bp CAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGCATAATCCCAGCACTTaGGAAGGCCGATGCGGGCGG +
Preference number: 3 (lower is better)
Translates to: QVLVTEGGDAVQHDAFKQHNPST*EGRCGR
Trigger: CCGCCCGCATCGGCCTTCCAAAGTGCTGGGATTATG...CTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
3UTR-3UTR CAA 90 bp ACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCATAGACAGTCCTTCTaGGGTACTCATAAGGGGGCT +
Preference number: 3 (lower is better)
Translates to: TVGTTQHQRAQGPEARQAHRQSF*GTHKGA
Trigger: AGCCCCCTTATGAGTACCCAAGAAGGACTGTCTATG...GGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR GCA 72 bp CAGGTAGCCACCCATCCGCAGGGAATGGAGCCGGGATaGCATGTACCTTCGAAGGAGGTGCCACATGACTTT +
Preference number: 3 (lower is better)
Translates to: QVATHPQGMEPG*HVPSKEVPHDF
Trigger: AAAGTCATGTGGCACCTCCTTCGAAGGTACATGGCATCCCGGCTCCATTCCCTGCGGATGGGTGGCTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586651.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
3UTR CCA 72 bp AGGCCACACAGCTGGCAAACAGTGATTCCAATGGTCTaGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGG +
Preference number: 3 (lower is better)
Translates to: RPHSWQTVIPMV*RSLGLCSLNLG
Trigger: CCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR TCA 72 bp ACATGGCTGGGGAGGCCTCAAAATCATGGCAGGAGGTaGAAGGCACTTCTTACATGGCGGCAGCAAGAGAAA +
Preference number: 3 (lower is better)
Translates to: TWLGRPQNHGRR*KALLTWRQQEK
Trigger: TTTCTCTTGCTGCCGCCATGTAAGAAGTGCCTTTCACCTCCTGCCATGATTTTGAGGCCTCCCCAGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
3UTR CCA 72 bp TGCCACATGACTTTAGGTCGCATAGTTCCACATGGCTaGGGAGGCCTCAAAATCATGGCAGGAGGTGAAAGG +
Preference number: 3 (lower is better)
Translates to: CHMTLGRIVPHG*GGLKIMAGGER
Trigger: CCTTTCACCTCCTGCCATGATTTTGAGGCCTCCCCAGCCATGTGGAACTATGCGACCTAAAGTCATGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
3UTR-3UTR CAA 90 bp CAGATGTGGGAACTAGGCTTCCCAGAGGCTGATGATATGACCAAGGCCACACAGCATAGACAGTCCTTCTaGGGTACTCATAAGGGGGCT +
Preference number: 3 (lower is better)
Translates to: QMWELGFPEADDMTKATQHRQSF*GTHKGA
Trigger: AGCCCCCTTATGAGTACCCAAGAAGGACTGTCTATG...CTGTGTGGCCTTGGTCATATCATCAGCCTCTGGGAAGCCTAGTTCCCACATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
3UTR TCA 72 bp AATATAATTGAGCACTTTTATGAGCATATCGATCATTaGATCGCGAGTCTGCATCGCCTATCTCTCCGCGTC +
Preference number: 3 (lower is better)
Translates to: NIIEHFYEHIDH*IASLHRLSLRV
Trigger: GACGCGGAGAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCATAAAAGTGCTCAATTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp GGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGAGGGCATTTCTGGGGTaGCGAGGGGACCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GPEARQALQVLVTEGGDARAFLG*RGDPAG
Trigger: GCCTGCAGGGTCCCCTCGTCACCCCAGAAATGCCCT...CGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp GGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGAGAGCAGGGGACAACTaGGGGGCCTGGGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GPEARQALQVLVTEGGDARAGDN*GAWEPE
Trigger: CTCTGGCTCCCAGGCCCCCCAGTTGTCCCCTGCTCT...CGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR CCA 90 bp GCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGAAGGCGGGGCCGCACCTaGAGATGCGGATCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: ASGPAGARHGRRGRGPARRRGRT*RCGSGP
Trigger: GGGACCGGATCCGCATCTCCAGGTGCGGCCCCGCCT...TCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586651.5
ENST00000589438.1
CDS-3UTR TCA 90 bp CGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGCCTCTCGCTGGGAAGTaGTTCGGTCCCAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: RKARKRVRPCRCSSRKAGPLAGK*FGPRAG
Trigger: TCCGGCCCTGGGACCGAATCACTTCCCAGCGAGAGG...CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp GGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGTGCTGGGCAGGCTGGTaGTGGGCACCATGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GPEARQALQVLVTEGGDACWAGW*WAPCSG
Trigger: ACCTGAGCATGGTGCCCATCACCAGCCTGCCCAGCA...CGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp AAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: KRVRPCRCSSRKAGTRSSVRPCR*SSRKAG
Trigger: CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGAC...GCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp ACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TSERKARKRVRPCRCSSRVRPCR*SSRKAG
Trigger: CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGAC...CCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR CCA 90 bp AGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCAGAGCAGGGGACAACTaGGGGGCCTGGGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RPGSASGPAGARHGRRGRRAGDN*GAWEPE
Trigger: CTCTGGCTCCCAGGCCCCCCAGTTGTCCCCTGCTCT...GCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR TCA 90 bp TCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCGCGTGGCTGAGGCAGTaGGAGGCTTGCGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SGPAGARHGRRGRGPARCAWLRQ*EACGRW
Trigger: CCACCTCCCGCAAGCCTCTCACTGCCTCAGCCACGC...GCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp ACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCGCGTGGCTGAGGCAGTaGGAGGCTTGCGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TVGTTQHQRAQGPEARQAAWLRQ*EACGRW
Trigger: CCACCTCCCGCAAGCCTCTCACTGCCTCAGCCACGC...GGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp CCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCCCTGGAAAGCGTGGCTaGGGCAGTGAGAGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: PPSTSERKARKRVRPCRCPGKRG*GSERLA
Trigger: CGCAAGCCTCTCACTGCCTCAGCCACGCTTTCCAGG...GCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp CAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCAGGGCATTTCTGGGGTaGCGAGGGGACCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QHQRAQGPEARQALQVLVRAFLG*RGDPAG
Trigger: GCCTGCAGGGTCCCCTCGTCACCCCAGAAATGCCCT...GACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp TCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SGPAGARHGRRGRGPARCVRPCR*SSRKAG
Trigger: CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGAC...GCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp GCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: ARQALQVLVTEGGDAVQHKRVRP*RCSSRK
Trigger: CTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT...GTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp CGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGCGGTCAGCCGGATCTTaGGCACATCTCGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RVRPCRCSSRKAGTRSSTRSAGS*AHLGGG
Trigger: GCCACCTCCGAGATGTGCGCAAGATCCGGCTGACCG...CGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592732.5
CDS-3UTR CCA 90 bp GCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACAGAGCAGGGGACAACTaGGGGGCCTGGGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: APASARPGSASGPAGARHRAGDN*GAWEPE
Trigger: CTCTGGCTCCCAGGCCCCCCAGTTGTCCCCTGCTCT...GTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR CCA 90 bp AGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATAGGCGGGGCCGCACCTaGAGATGCGGATCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: RPCRCSSRKAGTRSSTMHRRGRT*RCGSGP
Trigger: GGGACCGGATCCGCATCTCCAGGTGCGGCCCCGCCT...ATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586651.5
ENST00000589438.1
CDS-3UTR TCA 90 bp ACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGAGGTGGCTGAGGCGTaGTTTGGCCGCGACTGGGAA +
Preference number: 4 (lower is better)
Translates to: TQHQRAQGPEARQALQVLEVAEA*FGRDWE
Trigger: TTCCCAGTCGCGGCCAAATCACGCCTCAGCCACCTC...GAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp CACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTGAGGTGGCTGAGGCGTaGTTTGGCCGCGACTGGGAA +
Preference number: 4 (lower is better)
Translates to: HPAPASARPGSASGPAGAEVAEA*FGRDWE
Trigger: TTCCCAGTCGCGGCCAAATCACGCCTCAGCCACCTC...AGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp GAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGTGCTGGGCAGGCTGGTaGTGGGCACCATGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: ERKARKRVRPCRCSSRKACWAGW*WAPCSG
Trigger: ACCTGAGCATGGTGCCCATCACCAGCCTGCCCAGCA...CGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR TCA 90 bp ACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGTGCTGGGCAGGCTGGTaGTGGGCACCATGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: TTQHQRAQGPEARQALQVCWAGW*WAPCSG
Trigger: ACCTGAGCATGGTGCCCATCACCAGCCTGCCCAGCA...CACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp GCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ALQVLVTEGGDAVQHDAFVRPCR*SSRKAG
Trigger: CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGAC...GAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp CAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: QGPEARQALQVLVTEGGDKRVRP*RCSSRK
Trigger: CTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT...GTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp GCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: APASARPGSASGPAGARHKRVRP*RCSSRK
Trigger: CTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT...GTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp GCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACTGTCGGCAGACAGGGTaGAGCCCAGCACCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: APASARPGSASGPAGARHCRQTG*SPAPQA
Trigger: GGCTTGAGGTGCTGGGCTGCACCCTGTCTGCCGACA...GTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592732.5
CDS-3UTR GCA 90 bp CAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCCGGTCAGCCGGATCTTaGGCACATCTCGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QHQRAQGPEARQALQVLVRSAGS*AHLGGG
Trigger: GCCACCTCCGAGATGTGCGCAAGATCCGGCTGACCG...GACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592732.5
CDS-3UTR GCA 90 bp GCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCGGCCGCACCTGGAGATaGGGATCCGGTCCCGTACCG +
Preference number: 4 (lower is better)
Translates to: ALQVLVTEGGDAVQHDAFGRTWR*GSGPVP
Trigger: CGGTACGGGACCGGATCCGCATCTCCAGGTGCGGCC...GAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586651.5
ENST00000589438.1
CDS-3UTR CCA 90 bp GCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGAGAGGCTTGCGGGAGGTaGCTGAGGCGTGATTTGGCC +
Preference number: 4 (lower is better)
Translates to: ASGPAGARHGRRGRGPAREACGR*LRRDLA
Trigger: GGCCAAATCACGCCTCAGCCACCTCCCGCAAGCCTC...TCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR CCA 90 bp AGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCAAGCGGTGACAGACCCTaGAGATGCGGATCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: SASGPAGARHGRRGRGPASGDRP*RCGSGP
Trigger: GGGACCGGATCCGCATCTCCAGGGTCTGTCACCGCT...TGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589626.5
ENST00000590808.1
CDS-3UTR CCA 90 bp CACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCAGAGCAGGGGACAACTaGGGGGCCTGGGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: HGRYHPAPASARPGSASGRAGDN*GAWEPE
Trigger: CTCTGGCTCCCAGGCCCCCCAGTTGTCCCCTGCTCT...GCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR CCA 90 bp GGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTAGCGGTGACAGACCCTaGGGGAGGGGACGCGCGGTT +
Preference number: 4 (lower is better)
Translates to: GPAGARHGRRGRGPARCISGDRP*GRGRAV
Trigger: AACCGCGCGTCCCCTCCCCCAGGGTCTGTCACCGCT...AATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586651.5
ENST00000589438.1
CDS-3UTR TCA 90 bp ACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCCGACCAAAGTCGCCATaGTCCCGCCGACACGCACTT +
Preference number: 4 (lower is better)
Translates to: TQHQRAQGPEARQALQVLRPKSP*SRRHAL
Trigger: AAGTGCGTGTCGGCGGGATCATGGCGACTTTGGTCG...GAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp CACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCTGCTGGGCAGGCTGGTaGTGGGCACCATGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: HGRYHPAPASARPGSASGCWAGW*WAPCSG
Trigger: ACCTGAGCATGGTGCCCATCACCAGCCTGCCCAGCA...GCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp ACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCGACAGACCCTGGAGATaGGGATCCGGTCCCGTACCG +
Preference number: 4 (lower is better)
Translates to: TVGTTQHQRAQGPEARQADRPWR*GSGPVP
Trigger: CGGTACGGGACCGGATCCGCATCTCCAGGGTCTGTC...GGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589626.5
ENST00000590808.1
CDS-3UTR GCA 90 bp TCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: SGPAGARHGRRGRGPARCKRVRP*RCSSRK
Trigger: CTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT...GCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp CAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAATGTCGGCAGACAGGGTaGAGCCCAGCACCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: QRAQGPEARQALQVLVTECRQTG*SPAPQA
Trigger: GGCTTGAGGTGCTGGGCTGCACCCTGTCTGCCGACA...TTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592732.5
CDS-3UTR GCA 90 bp TGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCGGCCGCACCTGGAGATaGGGATCCGGTCCCGTACCG +
Preference number: 4 (lower is better)
Translates to: CSSRKAGTRSSTMHSSRGGRTWR*GSGPVP
Trigger: CGGTACGGGACCGGATCCGCATCTCCAGGTGCGGCC...GCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586651.5
ENST00000589438.1
CDS-3UTR TCA 90 bp CACACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGCCTGGAAAGCGTGGCTaGGGCAGTGAGAGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: HTVGTTQHQRAQGPEARQPGKRG*GSERLA
Trigger: CGCAAGCCTCTCACTGCCTCAGCCACGCTTTCCAGG...CTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp TCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAGCCCTCTCGCTGGGAAGTaGTTCGGTCCCAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: SSRKAGTRSSTMHSSRGSPLAGK*FGPRAG
Trigger: TCCGGCCCTGGGACCGAATCACTTCCCAGCGAGAGG...GCTGCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp CGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGGCCGGTCGAGAAATTTaGCCTTCCTCTCGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RVRPCRCSSRKAGTRSSTAGREI*PSSRWE
Trigger: TTCCCAGCGAGAGGAAGGTCAAATTTCTCGACCGGC...CGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp TGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAGGGCATTTCTGGGGTaGCGAGGGGACCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: CSSRKAGTRSSTMHSSRGRAFLG*RGDPAG
Trigger: GCCTGCAGGGTCCCCTCGTCACCCCAGAAATGCCCT...GCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp GTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGAGCCTCTTCCAGCGGTaGCAGACCCGGGAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: VGTTQHQRAQGPEARQALSLFQR*QTREVR
Trigger: TCTTACCTCCCGGGTCTGTCACCGCTGGAAGAGGCT...CAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp CCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCGGAATGGAGCCGGGATaGCATGTACCTTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PPSTSERKARKRVRPCRCGMEPG*HVPSKE
Trigger: CTCCTTCGAAGGTACATGGCATCCCGGCTCCATTCC...GCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp TGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: CRCSSRKAGTRSSTMHSSVRPCR*SSRKAG
Trigger: CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGAC...GCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp CAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QVLVTEGGDAVQHDAFKQVRPCR*SSRKAG
Trigger: CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGAC...CTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp CAGCATCCAGCCCTGTCTCGGTCACACGGTAGGTACCACCCAGCACCAGCGAGCGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QHPALSRSHGRYHPAPASVRPCR*SSRKAG
Trigger: CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGAC...GCTCGCTGGTGCTGGGTGGTACCTACCGTGTGACCGAGACAGGGCTGGATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp AGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: RPCRCSSRKAGTRSSTMHKRVRP*RCSSRK
Trigger: CTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT...ATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR CCA 90 bp CACACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGAGCGGTGACAGACCCTaGAGATGCGGATCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: HTVGTTQHQRAQGPEARQSGDRP*RCGSGP
Trigger: GGGACCGGATCCGCATCTCCAGGGTCTGTCACCGCT...CTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589626.5
ENST00000590808.1
CDS-3UTR CCA 90 bp GCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACAGGAGAGGATTTCAGTaGGGGAGGGCATTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ARQALQVLVTEGGDAVQHRRGFQ*GRAFLG
Trigger: CCCCAGAAATGCCCTCCCCCACTGAAATCCTCTCCT...GTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp AGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCCAAGGGCAGGTaGAGTAGTTACATCCACCAG +
Preference number: 4 (lower is better)
Translates to: RPGSASGPAGARHGRRGRGPKGR*SSYIHQ
Trigger: CTGGTGGATGTAACTACTCCACCTGCCCTTGGGACC...GCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp GCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAGAGGTGGCTGAGGCGTaGTTTGGCCGCGACTGGGAA +
Preference number: 4 (lower is better)
Translates to: ARHGRRGRGPARCIQAGAEVAEA*FGRDWE
Trigger: TTCCCAGTCGCGGCCAAATCACGCCTCAGCCACCTC...TGCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp TGTCTCGGTCACACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAACCTCTCGCTGGGAAGTaGTTCGGTCCCAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: CLGHTVGTTQHQRAQGPEPLAGK*FGPRAG
Trigger: TCCGGCCCTGGGACCGAATCACTTCCCAGCGAGAGG...TTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTGTGACCGAGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp ACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGGCCGGTCGAGAAATTTaGCCTTCCTCTCGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TTQHQRAQGPEARQALQVAGREI*PSSRWE
Trigger: TTCCCAGCGAGAGGAAGGTCAAATTTCTCGACCGGC...CACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp CTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAGTGCTGGGCAGGCTGGTaGTGGGCACCATGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LVTEGGDAVQHDAFKQGQCWAGW*WAPCSG
Trigger: ACCTGAGCATGGTGCCCATCACCAGCCTGCCCAGCA...CTGCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR TCA 90 bp GGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAAAGGTGACTCTTCATTaGGAGCCTCTGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSASGPAGARHGRRGRGPKVTLH*EPLEAG
Trigger: CCCAGCCTCCAGAGGCTCTCAATGAAGAGTCACCTT...TGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp CAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCGGCAGCAAGAGAAAATaGGAAAGAAGCCCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: QHQRAQGPEARQALQVLVGSKRK*ERSPGA
Trigger: TGCGCCCGGGCTTCTTTCTCATTTTCTCTTGCTGCC...GACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
CDS-3UTR GCA 90 bp CAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCGGAATGGAGCCGGGATaGCATGTACCTTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QHQRAQGPEARQALQVLVGMEPG*HVPSKE
Trigger: CTCCTTCGAAGGTACATGGCATCCCGGCTCCATTCC...GACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp CCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: PCRCSSRKAGTRSSTMHSKRVRP*RCSSRK
Trigger: CTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT...TGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp TCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAGCTGTCGGCAGACAGGGTaGAGCCCAGCACCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: SSRKAGTRSSTMHSSRGSCRQTG*SPAPQA
Trigger: GGCTTGAGGTGCTGGGCTGCACCCTGTCTGCCGACA...GCTGCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592732.5
CDS-3UTR GCA 90 bp CCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCATGTCGGCAGACAGGGTaGAGCCCAGCACCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: PCRCSSRKAGTRSSTMHSCRQTG*SPAPQA
Trigger: GGCTTGAGGTGCTGGGCTGCACCCTGTCTGCCGACA...TGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592732.5
CDS-3UTR GCA 90 bp CACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCACTTTGGAAGGCCGATaGGGGCGGATCACGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HGRYHPAPASARPGSASGTLEGR*GRITRS
Trigger: TGACCTCGTGATCCGCCCGCATCGGCCTTCCAAAGT...GCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
CDS-3UTR CCA 90 bp CCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAGAGGCTTGCGGGAGGTaGCTGAGGCGTGATTTGGCC +
Preference number: 4 (lower is better)
Translates to: PCRCSSRKAGTRSSTMHSEACGR*LRRDLA
Trigger: GGCCAAATCACGCCTCAGCCACCTCCCGCAAGCCTC...TGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR CCA 90 bp CAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGAGAGCAGGGGACAACTaGGGGGCCTGGGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: QVLVTEGGDAVQHDAFKQRAGDN*GAWEPE
Trigger: CTCTGGCTCCCAGGCCCCCCAGTTGTCCCCTGCTCT...CTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR CCA 90 bp AGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCAGGTCCCAAGGGCAGGTaGAGTAGTTACATCCACCAG +
Preference number: 4 (lower is better)
Translates to: SASGPAGARHGRRGRGPAGPKGR*SSYIHQ
Trigger: CTGGTGGATGTAACTACTCCACCTGCCCTTGGGACC...TGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp GGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAATAATCCCAGCACTTTaGAAGGCCGATGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: GSASGPAGARHGRRGRGPIIPAL*KADAGG
Trigger: TCCGCCCGCATCGGCCTTCCAAAGTGCTGGGATTAT...TGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
CDS-3UTR TCA 90 bp GTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGAAGGTGACTCTTCATTaGGAGCCTCTGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VGTTQHQRAQGPEARQALKVTLH*EPLEAG
Trigger: CCCAGCCTCCAGAGGCTCTCAATGAAGAGTCACCTT...CAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp TGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAGCCTCTTCCAGCGGTaGCAGACCCGGGAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: CSSRKAGTRSSTMHSSRGSLFQR*QTREVR
Trigger: TCTTACCTCCCGGGTCTGTCACCGCTGGAAGAGGCT...GCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp ACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCGGAATGGAGCCGGGATaGCATGTACCTTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TVGTTQHQRAQGPEARQAGMEPG*HVPSKE
Trigger: CTCCTTCGAAGGTACATGGCATCCCGGCTCCATTCC...GGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp GCCAGCATCCAGCCCTGTCTCGGTCACACGGTAGGTACCACCCAGCACCAGCGAAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: ASIQPCLGHTVGTTQHQRKRVRP*RCSSRK
Trigger: CTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT...TCGCTGGTGCTGGGTGGTACCTACCGTGTGACCGAGACAGGGCTGGATGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp GCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCATGTCGGCAGACAGGGTaGAGCCCAGCACCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: AGARHGRRGRGPARCIQACRQTG*SPAPQA
Trigger: GGCTTGAGGTGCTGGGCTGCACCCTGTCTGCCGACA...TGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592732.5
CDS-3UTR GCA 90 bp GCCAGCATCCAGCCCTGTCTCGGTCACACGGTAGGTACCACCCAGCACCAGCGACGGTCAGCCGGATCTTaGGCACATCTCGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ASIQPCLGHTVGTTQHQRRSAGS*AHLGGG
Trigger: GCCACCTCCGAGATGTGCGCAAGATCCGGCTGACCG...TCGCTGGTGCTGGGTGGTACCTACCGTGTGACCGAGACAGGGCTGGATGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592732.5
CDS-3UTR GCA 90 bp GGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTACTTTGGAAGGCCGATaGGGGCGGATCACGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GPAGARHGRRGRGPARCITLEGR*GRITRS
Trigger: TGACCTCGTGATCCGCCCGCATCGGCCTTCCAAAGT...AATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
CDS-3UTR CCA 90 bp CACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCAGGAGAGGATTTCAGTaGGGGAGGGCATTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: HGRYHPAPASARPGSASGRRGFQ*GRAFLG
Trigger: CCCCAGAAATGCCCTCCCCCACTGAAATCCTCTCCT...GCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp CAGCATCCAGCCCTGTCTCGGTCACACGGTAGGTACCACCCAGCACCAGCGAGCCGACCAAAGTCGCCATaGTCCCGCCGACACGCACTT +
Preference number: 4 (lower is better)
Translates to: QHPALSRSHGRYHPAPASRPKSP*SRRHAL
Trigger: AAGTGCGTGTCGGCGGGATCATGGCGACTTTGGTCG...GCTCGCTGGTGCTGGGTGGTACCTACCGTGTGACCGAGACAGGGCTGGATGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp CAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGCGACCAAAGTCGCCATaGTCCCGCCGACACGCACTT +
Preference number: 4 (lower is better)
Translates to: QVLVTEGGDAVQHDAFKQRPKSP*SRRHAL
Trigger: AAGTGCGTGTCGGCGGGATCATGGCGACTTTGGTCG...CTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR TCA 90 bp CCCTGTCTCGGTCACACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGAAGGTGACTCTTCATTaGGAGCCTCTGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PCLGHTVGTTQHQRAQGPKVTLH*EPLEAG
Trigger: CCCAGCCTCCAGAGGCTCTCAATGAAGAGTCACCTT...CGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTGTGACCGAGACAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp GCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGGAGCATATCGATCATTaGATCGCGAGTCTGCATCGC +
Preference number: 4 (lower is better)
Translates to: ASARPGSASGPAGARHGREHIDH*IASLHR
Trigger: GCGATGCAGACTCGCGATTCAATGATCGATATGCTC...CCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp TGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGCCTCTTCCAGCGGTaGCAGACCCGGGAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: CRCSSRKAGTRSSTMHSSSLFQR*QTREVR
Trigger: TCTTACCTCCCGGGTCTGTCACCGCTGGAAGAGGCT...GCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000592067.1
ENST00000592732.5
CDS-3UTR TCA 90 bp GCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCGGCAGCAAGAGAAAATaGGAAAGAAGCCCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: ALQVLVTEGGDAVQHDAFGSKRK*ERSPGA
Trigger: TGCGCCCGGGCTTCTTTCTCATTTTCTCTTGCTGCC...GAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
CDS-3UTR GCA 90 bp GTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGATTGAATCGCGAGTCTaGATCGCCTATCTCTCCGCG +
Preference number: 4 (lower is better)
Translates to: VGTTQHQRAQGPEARQALIESRV*IAYLSA
Trigger: CGCGGAGAGATAGGCGATGCAGACTCGCGATTCAAT...CAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp CCCTGTCTCGGTCACACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGGTCCCAAGGGCAGGTaGAGTAGTTACATCCACCAG +
Preference number: 4 (lower is better)
Translates to: PCLGHTVGTTQHQRAQGPGPKGR*SSYIHQ
Trigger: CTGGTGGATGTAACTACTCCACCTGCCCTTGGGACC...CGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTGTGACCGAGACAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp GTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGCTCAATGATGAAAACTaGGATGGGTCCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VPPSTSERKARKRVRPCRLNDEN*DGSQGQ
Trigger: CTGCCCTTGGGACCCATCCCAGTTTTCATCATTGAG...CCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp CAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACCCAAGGCCACACAGCTaGCAAACAGTGATTCCAATG +
Preference number: 4 (lower is better)
Translates to: QGPEARQALQVLVTEGGDPRPHS*QTVIPM
Trigger: CATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG...GTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp GGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCATCGCATAGTTCCACATaGCTGGGGAGGCCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: GSASGPAGARHGRRGRGPSHSST*LGRPQN
Trigger: ATTTTGAGGCCTCCCCAGCCATGTGGAACTATGCGA...TGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
CDS-3UTR TCA 90 bp TCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAGCCAGAGGCTGATGATATaGCCAAGGCCACACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSRKAGTRSSTMHSSRGSQRLMI*PRPHSW
Trigger: CCAGCTGTGTGGCCTTGGTCATATCATCAGCCTCTG...GCTGCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp CTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAGGGAATGGAGCCGGGATaGCATGTACCTTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LVTEGGDAVQHDAFKQGQGMEPG*HVPSKE
Trigger: CTCCTTCGAAGGTACATGGCATCCCGGCTCCATTCC...CTGCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR CCA 90 bp CGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGTCTGTTCTCTCAACCTaGGGCTTTCAGTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: RKARKRVRPCRCSSRKAGSVLST*GFQFPQ
Trigger: TTGAGGAAACTGAAAGCCCCAGGTTGAGAGAACAGA...CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp GGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTCCAAGGCCACACAGCTaGCAAACAGTGATTCCAATG +
Preference number: 4 (lower is better)
Translates to: GRYHPAPASARPGSASGPPRPHS*QTVIPM
Trigger: CATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG...AGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp CAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAATCGCATAGTTCCACATaGCTGGGGAGGCCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: QRAQGPEARQALQVLVTESHSST*LGRPQN
Trigger: ATTTTGAGGCCTCCCCAGCCATGTGGAACTATGCGA...TTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
CDS-3UTR GCA 90 bp CAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGAATGGAGCCGGGATaGCATGTACCTTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QVLVTEGGDAVQHDAFKQGMEPG*HVPSKE
Trigger: CTCCTTCGAAGGTACATGGCATCCCGGCTCCATTCC...CTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR GCA 90 bp CTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGGGAATGGAGCCGGGATaGCATGTACCTTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LQVLVTEGGDAVQHDAFKGMEPG*HVPSKE
Trigger: CTCCTTCGAAGGTACATGGCATCCCGGCTCCATTCC...CTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000590808.1
ENST00000592067.1
ENST00000592732.5
CDS-3UTR CCA 90 bp CCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTCTGGAGGTCCCTAGGCAGAGCAGGGGACAACTaGGGGGCCTGGGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PRPHSWQTVIPMVWRSLGRAGDN*GAWEPE
Trigger: CTCTGGCTCCCAGGCCCCCCAGTTGTCCCCTGCTCT...GCCTAGGGACCTCCAGACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp TGTCTCGGTCACACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAAGGAGAGGATTTCAGTaGGGGAGGGCATTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: CLGHTVGTTQHQRAQGPERRGFQ*GRAFLG
Trigger: CCCCAGAAATGCCCTCCCCCACTGAAATCCTCTCCT...TTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTGTGACCGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp GCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCGCTGCTCAGAGGGTCTaGGGCTCAATGATGAAAACT +
Preference number: 4 (lower is better)
Translates to: ALQVLVTEGGDAVQHDAFAAQRV*GSMMKT
Trigger: AGTTTTCATCATTGAGCCCCAGACCCTCTGAGCAGC...GAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp CCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTCTGGAGGTCCCTAGGCCCTGGAAAGCGTGGCTaGGGCAGTGAGAGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: PRPHSWQTVIPMVWRSLGPGKRG*GSERLA
Trigger: CGCAAGCCTCTCACTGCCTCAGCCACGCTTTCCAGG...GCCTAGGGACCTCCAGACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp GATTCCAATGGTCTGGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGGCTTTCCCTCTCGCTGGGAAGTaGTTCGGTCCCAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: DSNGLEVPRPLFSQPGAFPLAGK*FGPRAG
Trigger: TCCGGCCCTGGGACCGAATCACTTCCCAGCGAGAGG...GAAAGCCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp AGTGATTCCAATGGTCTGGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGGCTAGGGCATTTCTGGGGTaGCGAGGGGACCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SDSNGLEVPRPLFSQPGARAFLG*RGDPAG
Trigger: GCCTGCAGGGTCCCCTCGTCACCCCAGAAATGCCCT...AGCCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp GTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGGAGCATATCGATCATTaGATCGCGAGTCTGCATCGC +
Preference number: 4 (lower is better)
Translates to: VLVTEGGDAVQHDAFKQGEHIDH*IASLHR
Trigger: GCGATGCAGACTCGCGATTCAATGATCGATATGCTC...CCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp CCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTCTGGAGGTCCCTAGGCGACAGACCCTGGAGATaGGGATCCGGTCCCGTACCG +
Preference number: 4 (lower is better)
Translates to: PRPHSWQTVIPMVWRSLGDRPWR*GSGPVP
Trigger: CGGTACGGGACCGGATCCGCATCTCCAGGGTCTGTC...GCCTAGGGACCTCCAGACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247977.9
ENST00000589626.5
CDS-3UTR GCA 90 bp CCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTCTGGAGGTCCCTAGGCCGGTCAGCCGGATCTTaGGCACATCTCGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PRPHSWQTVIPMVWRSLGRSAGS*AHLGGG
Trigger: GCCACCTCCGAGATGTGCGCAAGATCCGGCTGACCG...GCCTAGGGACCTCCAGACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp CAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGATTGAATCGCGAGTCTaGATCGCCTATCTCTCCGCG +
Preference number: 4 (lower is better)
Translates to: QVLVTEGGDAVQHDAFKQIESRV*IAYLSA
Trigger: CGCGGAGAGATAGGCGATGCAGACTCGCGATTCAAT...CTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp AGTGATTCCAATGGTCTGGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGGCTCGGACCAGCCGCGGATaGGGACCAGAAACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SDSNGLEVPRPLFSQPGARTSRG*GPETSL
Trigger: CAGGCTGGTTTCTGGTCCCCATCCGCGGCTGGTCCG...AGCCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp AGTGATTCCAATGGTCTGGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGGCTAGAGCAGGGGACAACTaGGGGGCCTGGGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SDSNGLEVPRPLFSQPGARAGDN*GAWEPE
Trigger: CTCTGGCTCCCAGGCCCCCCAGTTGTCCCCTGCTCT...AGCCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp TCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCTCTGTTCTCTCAACCTaGGGCTTTCAGTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SGPAGARHGRRGRGPARCSVLST*GFQFPQ
Trigger: TTGAGGAAACTGAAAGCCCCAGGTTGAGAGAACAGA...GCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp CTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAGCCAAGGCCACACAGCTaGCAAACAGTGATTCCAATG +
Preference number: 4 (lower is better)
Translates to: LVTEGGDAVQHDAFKQGQPRPHS*QTVIPM
Trigger: CATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG...CTGCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp CAGATGTGGGAACTAGGCTTCCCAGAGGCTGATGATATGACCAAGGCCACACAGCTTGCGGGAGGTGGCTaGGGCGTGATTTGGCCGCGA +
Preference number: 4 (lower is better)
Translates to: QMWELGFPEADDMTKATQLAGGG*GVIWPR
Trigger: TCGCGGCCAAATCACGCCTCAGCCACCTCCCGCAAG...CTGTGTGGCCTTGGTCATATCATCAGCCTCTGGGAAGCCTAGTTCCCACATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp CGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGTTTAGGTCGCATATCTaGCTTTTATTGCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: RKARKRVRPCRCSSRKAGFRSHI*LLLLDF
Trigger: GAAATCCAGCAATAAAAGGCAGATATGCGACCTAAA...CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589626.5
ENST00000592067.1
CDS-3UTR CCA 90 bp GATTCCAATGGTCTGGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGGCTTTCGAGGCTTGCGGGAGGTaGCTGAGGCGTGATTTGGCC +
Preference number: 4 (lower is better)
Translates to: DSNGLEVPRPLFSQPGAFEACGR*LRRDLA
Trigger: GGCCAAATCACGCCTCAGCCACCTCCCGCAAGCCTC...GAAAGCCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp ATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCTCCGCGTCTGCGTGGCTGAGGCAGTaGGAGGCTTGCGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: MSISIIESRVCIAYLSASAWLRQ*EACGRW
Trigger: CCACCTCCCGCAAGCCTCTCACTGCCTCAGCCACGC...AGACGCGGAGAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp CAGATGTGGGAACTAGGCTTCCCAGAGGCTGATGATATGACCAAGGCCACACAGCGGTCAGCCGGATCTTaGGCACATCTCGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QMWELGFPEADDMTKATQRSAGS*AHLGGG
Trigger: GCCACCTCCGAGATGTGCGCAAGATCCGGCTGACCG...CTGTGTGGCCTTGGTCATATCATCAGCCTCTGGGAAGCCTAGTTCCCACATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp CAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGCCTTATTTCCAGATGTaGGAACTAGGCTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QVLVTEGGDAVQHDAFKQPYFQM*ELGFPE
Trigger: CTCTGGGAAGCCTAGTTCCCACATCTGGAAATAAGG...CTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp TGTCTCGGTCACACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAACCTTATTTCCAGATGTaGGAACTAGGCTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: CLGHTVGTTQHQRAQGPEPYFQM*ELGFPE
Trigger: CTCTGGGAAGCCTAGTTCCCACATCTGGAAATAAGG...TTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGTGTGACCGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp TCATGGCAGGAGGTGAAAGGCACTTCTTACATGGCGGCAGCAAGAGAAAATGAGAGCGGTGACAGACCCTaGGGGAGGGGACGCGCGGTT +
Preference number: 4 (lower is better)
Translates to: SWQEVKGTSYMAAARENESGDRP*GRGRAV
Trigger: AACCGCGCGTCCCCTCCCCCAGGGTCTGTCACCGCT...CTCATTTTCTCTTGCTGCCGCCATGTAAGAAGTGCCTTTCACCTCCTGCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589438.1
CDS-3UTR TCA 90 bp GCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCTCCGCGTCTCTTGTGCTGGGCAGGCTGGTaGTGGGCACCATGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: AYRSLNRESASPISPRLLCWAGW*WAPCSG
Trigger: ACCTGAGCATGGTGCCCATCACCAGCCTGCCCAGCA...CAAGAGACGCGGAGAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp CCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTCTGGAGGTCCCTAGGCGGAATGGAGCCGGGATaGCATGTACCTTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PRPHSWQTVIPMVWRSLGGMEPG*HVPSKE
Trigger: CTCCTTCGAAGGTACATGGCATCCCGGCTCCATTCC...GCCTAGGGACCTCCAGACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp GCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCTCCGCGTCTCTTGGAGGCTTGCGGGAGGTaGCTGAGGCGTGATTTGGCC +
Preference number: 4 (lower is better)
Translates to: AYRSLNRESASPISPRLLEACGR*LRRDLA
Trigger: GGCCAAATCACGCCTCAGCCACCTCCCGCAAGCCTC...CAAGAGACGCGGAGAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp GAGGCTGATGATATGACCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTGAGGTGGCTGAGGCGTaGTTTGGCCGCGACTGGGAA +
Preference number: 4 (lower is better)
Translates to: EADDMTKATQLANSDSNGEVAEA*FGRDWE
Trigger: TTCCCAGTCGCGGCCAAATCACGCCTCAGCCACCTC...ACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGGTCATATCATCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp GAGGCTGATGATATGACCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTCCTGGAAAGCGTGGCTaGGGCAGTGAGAGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: EADDMTKATQLANSDSNGPGKRG*GSERLA
Trigger: CGCAAGCCTCTCACTGCCTCAGCCACGCTTTCCAGG...ACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGGTCATATCATCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp AGTGATTCCAATGGTCTGGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGGCTCAGAGGCTGATGATATaGCCAAGGCCACACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SDSNGLEVPRPLFSQPGAQRLMI*PRPHSW
Trigger: CCAGCTGTGTGGCCTTGGTCATATCATCAGCCTCTG...AGCCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp ATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCTCCGCGTCTGACAGACCCTGGAGATaGGGATCCGGTCCCGTACCG +
Preference number: 4 (lower is better)
Translates to: MSISIIESRVCIAYLSASDRPWR*GSGPVP
Trigger: CGGTACGGGACCGGATCCGCATCTCCAGGGTCTGTC...AGACGCGGAGAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247977.9
ENST00000589626.5
CDS-3UTR GCA 90 bp GAGGCTGATGATATGACCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTAAGCGCGTCAGGCCCTaGAGGTGCTCGTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: EADDMTKATQLANSDSNGKRVRP*RCSSRK
Trigger: CTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT...ACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGGTCATATCATCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp GAGGCTGATGATATGACCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTTGTCGGCAGACAGGGTaGAGCCCAGCACCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: EADDMTKATQLANSDSNGCRQTG*SPAPQA
Trigger: GGCTTGAGGTGCTGGGCTGCACCCTGTCTGCCGACA...ACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGGTCATATCATCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp ATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCTCCGCGTCTCGGTCAGCCGGATCTTaGGCACATCTCGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: MSISIIESRVCIAYLSASRSAGS*AHLGGG
Trigger: GCCACCTCCGAGATGTGCGCAAGATCCGGCTGACCG...AGACGCGGAGAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp GGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTTTTAGGTCGCATATCTaGCTTTTATTGCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: GPAGARHGRRGRGPARCIFRSHI*LLLLDF
Trigger: GAAATCCAGCAATAAAAGGCAGATATGCGACCTAAA...AATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000589626.5
ENST00000592067.1
CDS-3UTR CCA 90 bp GATGATATGACCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTCTGGAGAGCGGTGACAGACCCTaGAGATGCGGATCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: DDMTKATQLANSDSNGLESGDRP*RCGSGP
Trigger: GGGACCGGATCCGCATCTCCAGGGTCTGTCACCGCT...CTCCAGACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGGTCATATCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247977.9
ENST00000589626.5
CDS-3UTR TCA 90 bp GAGGCTGATGATATGACCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTCGACCAAAGTCGCCATaGTCCCGCCGACACGCACTT +
Preference number: 4 (lower is better)
Translates to: EADDMTKATQLANSDSNGRPKSP*SRRHAL
Trigger: AAGTGCGTGTCGGCGGGATCATGGCGACTTTGGTCG...ACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGGTCATATCATCAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp CAGATGTGGGAACTAGGCTTCCCAGAGGCTGATGATATGACCAAGGCCACACAGCAGAGGCTGATGATATaGCCAAGGCCACACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QMWELGFPEADDMTKATQQRLMI*PRPHSW
Trigger: CCAGCTGTGTGGCCTTGGTCATATCATCAGCCTCTG...CTGTGTGGCCTTGGTCATATCATCAGCCTCTGGGAAGCCTAGTTCCCACATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp CAGATGTGGGAACTAGGCTTCCCAGAGGCTGATGATATGACCAAGGCCACACAGAAGGTGACTCTTCATTaGGAGCCTCTGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QMWELGFPEADDMTKATQKVTLH*EPLEAG
Trigger: CCCAGCCTCCAGAGGCTCTCAATGAAGAGTCACCTT...CTGTGTGGCCTTGGTCATATCATCAGCCTCTGGGAAGCCTAGTTCCCACATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp AGCACTTTTATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCGTCAGGCCCTGCAGGTaGTCGTCACGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: STFMSISIIESRVCIAYLVRPCR*SSRKAG
Trigger: CCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGAC...GAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCATAAAAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp GATTCCAATGGTCTGGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGGCTTTCATTGAATCGCGAGTCTaGATCGCCTATCTCTCCGCG +
Preference number: 4 (lower is better)
Translates to: DSNGLEVPRPLFSQPGAFIESRV*IAYLSA
Trigger: CGCGGAGAGATAGGCGATGCAGACTCGCGATTCAAT...GAAAGCCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp CATTTATCGAATGATAAATATGTGCCAGACTGTTCTAAGCCCTTTCCCTGCGTGGCCCGCCCGGCCAGCTaGGCGTACCGTGTAGAGCGT +
Preference number: 4 (lower is better)
Translates to: HLSNDKYVPDCSKPFPCVARPAS*AYRVER
Trigger: ACGCTCTACACGGTACGCGCAGCTGGCCGGGCGGGC...CACGCAGGGAAAGGGCTTAGAACAGTCTGGCACATATTTATCATTCGATAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586073.1
CDS-3UTR CCA 90 bp CAGATGTGGGAACTAGGCTTCCCAGAGGCTGATGATATGACCAAGGCCACACAGAGGAGAGGATTTCAGTaGGGGAGGGCATTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QMWELGFPEADDMTKATQRRGFQ*GRAFLG
Trigger: CCCCAGAAATGCCCTCCCCCACTGAAATCCTCTCCT...CTGTGTGGCCTTGGTCATATCATCAGCCTCTGGGAAGCCTAGTTCCCACATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp CCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTCTGGAGGTCCCTAGGCCTCAATGATGAAAACTaGGATGGGTCCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRPHSWQTVIPMVWRSLGLNDEN*DGSQGQ
Trigger: CTGCCCTTGGGACCCATCCCAGTTTTCATCATTGAG...GCCTAGGGACCTCCAGACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp CCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTCTGGAGGTCCCTAGGCGCTGCTCAGAGGGTCTaGGGCTCAATGATGAAAACT +
Preference number: 4 (lower is better)
Translates to: PRPHSWQTVIPMVWRSLGAAQRV*GSMMKT
Trigger: AGTTTTCATCATTGAGCCCCAGACCCTCTGAGCAGC...GCCTAGGGACCTCCAGACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp GATTCCAATGGTCTGGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGGCTTTCTACCTTCGAAGGAGGTaGCACATGACTTTAGGTCGC +
Preference number: 4 (lower is better)
Translates to: DSNGLEVPRPLFSQPGAFYLRRR*HMTLGR
Trigger: GCGACCTAAAGTCATGTGGCACCTCCTTCGAAGGTA...GAAAGCCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp GCCTCAAAATCATGGCAGGAGGTGAAAGGCACTTCTTACATGGCGGCAGCAAGAATAATCCCAGCACTTTaGAAGGCCGATGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: ASKSWQEVKGTSYMAAARIIPAL*KADAGG
Trigger: TCCGCCCGCATCGGCCTTCCAAAGTGCTGGGATTAT...TCTTGCTGCCGCCATGTAAGAAGTGCCTTTCACCTCCTGCCATGATTTTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
CDS-3UTR CCA 90 bp CATTTATCGAATGATAAATATGTGCCAGACTGTTCTAAGCCCTTTCCCTGCGTGCCAGGGTGGGAGAGGTaGTCTTCGGGGTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: HLSNDKYVPDCSKPFPCVPGWER*SSGSGH
Trigger: GTGCCCGGACCCCGAAGACCACCTCTCCCACCCTGG...CACGCAGGGAAAGGGCTTAGAACAGTCTGGCACATATTTATCATTCGATAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586073.1
CDS-3UTR TCA 90 bp AGCACTTTTATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCTGCTGGGCAGGCTGGTaGTGGGCACCATGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: STFMSISIIESRVCIAYLCWAGW*WAPCSG
Trigger: ACCTGAGCATGGTGCCCATCACCAGCCTGCCCAGCA...GAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCATAAAAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp CAGATGTGGGAACTAGGCTTCCCAGAGGCTGATGATATGACCAAGGCCACACAGGAGCATATCGATCATTaGATCGCGAGTCTGCATCGC +
Preference number: 4 (lower is better)
Translates to: QMWELGFPEADDMTKATQEHIDH*IASLHR
Trigger: GCGATGCAGACTCGCGATTCAATGATCGATATGCTC...CTGTGTGGCCTTGGTCATATCATCAGCCTCTGGGAAGCCTAGTTCCCACATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp CAGATGTGGGAACTAGGCTTCCCAGAGGCTGATGATATGACCAAGGCCACACAGCTCAATGATGAAAACTaGGATGGGTCCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QMWELGFPEADDMTKATQLNDEN*DGSQGQ
Trigger: CTGCCCTTGGGACCCATCCCAGTTTTCATCATTGAG...CTGTGTGGCCTTGGTCATATCATCAGCCTCTGGGAAGCCTAGTTCCCACATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp CATTTATCGAATGATAAATATGTGCCAGACTGTTCTAAGCCCTTTCCCTGCGTGGACAGACCCTGGAGATaGGGATCCGGTCCCGTACCG +
Preference number: 4 (lower is better)
Translates to: HLSNDKYVPDCSKPFPCVDRPWR*GSGPVP
Trigger: CGGTACGGGACCGGATCCGCATCTCCAGGGTCTGTC...CACGCAGGGAAAGGGCTTAGAACAGTCTGGCACATATTTATCATTCGATAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586073.1
CDS-3UTR CCA 90 bp CATTTATCGAATGATAAATATGTGCCAGACTGTTCTAAGCCCTTTCCCTGCGTGAGCGGTGACAGACCCTaGAGATGCGGATCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: HLSNDKYVPDCSKPFPCVSGDRP*RCGSGP
Trigger: GGGACCGGATCCGCATCTCCAGGGTCTGTCACCGCT...CACGCAGGGAAAGGGCTTAGAACAGTCTGGCACATATTTATCATTCGATAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586073.1
CDS-3UTR CCA 90 bp GATTCCAATGGTCTGGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGGCTTTCTCTGTTCTCTCAACCTaGGGCTTTCAGTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: DSNGLEVPRPLFSQPGAFSVLST*GFQFPQ
Trigger: TTGAGGAAACTGAAAGCCCCAGGTTGAGAGAACAGA...GAAAGCCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp CATTTATCGAATGATAAATATGTGCCAGACTGTTCTAAGCCCTTTCCCTGCGTGCGACCAAAGTCGCCATaGTCCCGCCGACACGCACTT +
Preference number: 4 (lower is better)
Translates to: HLSNDKYVPDCSKPFPCVRPKSP*SRRHAL
Trigger: AAGTGCGTGTCGGCGGGATCATGGCGACTTTGGTCG...CACGCAGGGAAAGGGCTTAGAACAGTCTGGCACATATTTATCATTCGATAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586073.1
CDS-3UTR CCA 90 bp GAGGCTGATGATATGACCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTCTCAATGATGAAAACTaGGATGGGTCCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: EADDMTKATQLANSDSNGLNDEN*DGSQGQ
Trigger: CTGCCCTTGGGACCCATCCCAGTTTTCATCATTGAG...ACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGGTCATATCATCAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp GAGGCTGATGATATGACCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTGCTGCTCAGAGGGTCTaGGGCTCAATGATGAAAACT +
Preference number: 4 (lower is better)
Translates to: EADDMTKATQLANSDSNGAAQRV*GSMMKT
Trigger: AGTTTTCATCATTGAGCCCCAGACCCTCTGAGCAGC...ACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGGTCATATCATCAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp GATGATATGACCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTCTGGAGCCAAGGCCACACAGCTaGCAAACAGTGATTCCAATG +
Preference number: 4 (lower is better)
Translates to: DDMTKATQLANSDSNGLEPRPHS*QTVIPM
Trigger: CATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGG...CTCCAGACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGGTCATATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp GCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCTCCGCGTCTCTTGCCTTATTTCCAGATGTaGGAACTAGGCTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: AYRSLNRESASPISPRLLPYFQM*ELGFPE
Trigger: CTCTGGGAAGCCTAGTTCCCACATCTGGAAATAAGG...CAAGAGACGCGGAGAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp AGCACTTTTATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCGCCGGTCGAGAAATTTaGCCTTCCTCTCGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: STFMSISIIESRVCIAYLAGREI*PSSRWE
Trigger: TTCCCAGCGAGAGGAAGGTCAAATTTCTCGACCGGC...GAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCATAAAAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CCA 90 bp AGCACTTTTATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCGGTCCCAAGGGCAGGTaGAGTAGTTACATCCACCAG +
Preference number: 4 (lower is better)
Translates to: STFMSISIIESRVCIAYLGPKGR*SSYIHQ
Trigger: CTGGTGGATGTAACTACTCCACCTGCCCTTGGGACC...GAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCATAAAAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp CATTTATCGAATGATAAATATGTGCCAGACTGTTCTAAGCCCTTTCCCTGCGTGAGGAAATTGAGGCCCTaGGGTCGAAGAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HLSNDKYVPDCSKPFPCVRKLRP*GRRGAG
Trigger: ACCAGCTCCTCTTCGACCTCAGGGCCTCAATTTCCT...CACGCAGGGAAAGGGCTTAGAACAGTCTGGCACATATTTATCATTCGATAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586073.1
CDS-3UTR CCA 90 bp ATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCTCCGCGTCTTCTGTTCTCTCAACCTaGGGCTTTCAGTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: MSISIIESRVCIAYLSASSVLST*GFQFPQ
Trigger: TTGAGGAAACTGAAAGCCCCAGGTTGAGAGAACAGA...AGACGCGGAGAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp AGCACTTTTATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCGAGCATATCGATCATTaGATCGCGAGTCTGCATCGC +
Preference number: 4 (lower is better)
Translates to: STFMSISIIESRVCIAYLEHIDH*IASLHR
Trigger: GCGATGCAGACTCGCGATTCAATGATCGATATGCTC...GAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCATAAAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR TCA 90 bp CATTTATCGAATGATAAATATGTGCCAGACTGTTCTAAGCCCTTTCCCTGCGTGCCCATAATAGCCCCGTaGGGCAGGTACTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: HLSNDKYVPDCSKPFPCVPIIAP*GRYCPL
Trigger: TAAAGGACAGTACCTGCCTCACGGGGCTATTATGGG...CACGCAGGGAAAGGGCTTAGAACAGTCTGGCACATATTTATCATTCGATAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586073.1
CDS-3UTR CCA 90 bp AGCACTTTTATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCGCTGCTCAGAGGGTCTaGGGCTCAATGATGAAAACT +
Preference number: 4 (lower is better)
Translates to: STFMSISIIESRVCIAYLAAQRV*GSMMKT
Trigger: AGTTTTCATCATTGAGCCCCAGACCCTCTGAGCAGC...GAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCATAAAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR GCA 90 bp CATTTATCGAATGATAAATATGTGCCAGACTGTTCTAAGCCCTTTCCCTGCGTGGTCCTTTATCCCCATTaGAGGGATGAGGAAATTGAG +
Preference number: 4 (lower is better)
Translates to: HLSNDKYVPDCSKPFPCVVLYPH*RDEEIE
Trigger: CTCAATTTCCTCATCCCTGCAATGGGGATAAAGGAC...CACGCAGGGAAAGGGCTTAGAACAGTCTGGCACATATTTATCATTCGATAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586073.1
CDS-3UTR CAA 90 bp ACGGTAGGTACCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCGAGGCAGTGAGAGGCTaGCGGGAGGTGGCTGAGGCG +
Preference number: 5 (lower is better)
Translates to: TVGTTQHQRAQGPEARQAEAVRG*REVAEA
Trigger: CGCCTCAGCCACCTCCCGCAAGCCTCTCACTGCCTC...GGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGGTACCTACCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR CAA 90 bp AGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCACGGTCAGCCGGATCTaGCGCACATCTCGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: RPGSASGPAGARHGRRGRTVSRI*RTSRRW
Trigger: CCACCTCCGAGATGTGCGCAAGATCCGGCTGACCGT...GCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592732.5
CDS-3UTR CAA 90 bp CCACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCACGGTCAGCCGGATCTaGCGCACATCTCGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: PPSTSERKARKRVRPCRCTVSRI*RTSRRW
Trigger: CCACCTCCGAGATGTGCGCAAGATCCGGCTGACCGT...GCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592732.5
CDS-3UTR CAA 90 bp CACCCAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTACGGTCAGCCGGATCTaGCGCACATCTCGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: HPAPASARPGSASGPAGATVSRI*RTSRRW
Trigger: CCACCTCCGAGATGTGCGCAAGATCCGGCTGACCGT...AGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTGGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592732.5
CDS-3UTR CAA 90 bp GTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGGAGGCAGTGAGAGGCTaGCGGGAGGTGGCTGAGGCG +
Preference number: 5 (lower is better)
Translates to: VLVTEGGDAVQHDAFKQGEAVRG*REVAEA
Trigger: CGCCTCAGCCACCTCCCGCAAGCCTCTCACTGCCTC...CCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR CAA 90 bp TCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCACGGTCAGCCGGATCTaGCGCACATCTCGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SGPAGARHGRRGRGPARCTVSRI*RTSRRW
Trigger: CCACCTCCGAGATGTGCGCAAGATCCGGCTGACCGT...GCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592732.5
CDS-3UTR CAA 90 bp CGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATCATAATCCCAGCACTTaGGAAGGCCGATGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: RQALQVLVTEGGDAVQHDHNPST*EGRCGR
Trigger: CCGCCCGCATCGGCCTTCCAAAGTGCTGGGATTATG...ATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589438.1
ENST00000590808.1
CDS-3UTR CAA 90 bp CTCGTCACGGAAGGCGGGGACGCGGTCCAGCACGATGCATTCAAGCAGGGGCAGACGGTCAGCCGGATCTaGCGCACATCTCGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LVTEGGDAVQHDAFKQGQTVSRI*RTSRRW
Trigger: CCACCTCCGAGATGTGCGCAAGATCCGGCTGACCGT...CTGCCCCTGCTTGAATGCATCGTGCTGGACCGCGTCCCCGCCTTCCGTGACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589438.1
ENST00000589626.5
ENST00000592732.5
CDS TCA 90 bp AGCGTGGCTGAGGCAGTGAGAGGCTTGCGGGAGGTGGCTGAGGCGTaGTTTGGCCGCGACTGGGAACTAAGACCAAGTCCAGAAGGCGGG +
Preference number: 5 (lower is better)
Translates to: SVAEAVRGLREVAEA*FGRDWELRPSPEGG
Trigger: CCCGCCTTCTGGACTTGGTCTTAGTTCCCAGTCGCGGCCAAATCACGCCTCAGCCACCTCCCGCAAGCCTCTCACTGCCTCAGCCACGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586469.1
CDS-3UTR CAA 90 bp CAGCACCAGCGAGCGCAAGGCCCGGAAGCGCGTCAGGCCCTGCAGGTGCTCGTCCATAGACAGTCCTTCTaGGGTACTCATAAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: QHQRAQGPEARQALQVLVHRQSF*GTHKGA
Trigger: AGCCCCCTTATGAGTACCCAAGAAGGACTGTCTATG...GACGAGCACCTGCAGGGCCTGACGCGCTTCCGGGCCTTGCGCTCGCTGGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CAA 90 bp AAGCGCGTCAGGCCCTGCAGGTGCTCGTCACGGAAGGCGGGGACGCGGTCCAGCCATAGACAGTCCTTCTaGGGTACTCATAAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: KRVRPCRCSSRKAGTRSSHRQSF*GTHKGA
Trigger: AGCCCCCTTATGAGTACCCAAGAAGGACTGTCTATG...GCTGGACCGCGTCCCCGCCTTCCGTGACGAGCACCTGCAGGGCCTGACGCGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CAA 90 bp AGTGATTCCAATGGTCTGGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGGCTGAGGCAGTGAGAGGCTaGCGGGAGGTGGCTGAGGCG +
Preference number: 5 (lower is better)
Translates to: SDSNGLEVPRPLFSQPGAEAVRG*REVAEA
Trigger: CGCCTCAGCCACCTCCCGCAAGCCTCTCACTGCCTC...AGCCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS TCA 90 bp AGATCTCGAGCAGGACCGAGTCCGGCAGTTCGACCAAAGTCGCCATaGTCCCGCCGACACGCACTTCCGCTTCCGGTTAAAGAGACCCGA +
Preference number: 5 (lower is better)
Translates to: RSRAGPSPAVRPKSP*SRRHALPLPVKETR
Trigger: TCGGGTCTCTTTAACCGGAAGCGGAAGTGCGTGTCGGCGGGATCATGGCGACTTTGGTCGAACTGCCGGACTCGGTCCTGCTCGAGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247977.9
ENST00000586469.1
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1
CDS-3UTR CAA 90 bp CAGATGTGGGAACTAGGCTTCCCAGAGGCTGATGATATGACCAAGGCCACACAGGAGGCAGTGAGAGGCTaGCGGGAGGTGGCTGAGGCG +
Preference number: 5 (lower is better)
Translates to: QMWELGFPEADDMTKATQEAVRG*REVAEA
Trigger: CGCCTCAGCCACCTCCCGCAAGCCTCTCACTGCCTC...CTGTGTGGCCTTGGTCATATCATCAGCCTCTGGGAAGCCTAGTTCCCACATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CAA 90 bp ATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCTCCGCGTCTACGGTCAGCCGGATCTaGCGCACATCTCGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: MSISIIESRVCIAYLSASTVSRI*RTSRRW
Trigger: CCACCTCCGAGATGTGCGCAAGATCCGGCTGACCGT...AGACGCGGAGAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS TCA 90 bp AGCACTTTGGAAGGCCGATGCGGGCGGATCACGAGGTCAGGAGATTaGGACCATCCTGGCCAACATGACAAAACCCCGTTTCTACGTGTA +
Preference number: 5 (lower is better)
Translates to: STLEGRCGRITRSGD*DHPGQHDKTPFLRV
Trigger: TACACGTAGAAACGGGGTTTTGTCATGTTGGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCATCGGCCTTCCAAAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590808.1
CDS-3UTR CAA 90 bp AGTGATTCCAATGGTCTGGAGGTCCCTAGGCCTCTGTTCTCTCAACCTGGGGCTCATAGACAGTCCTTCTaGGGTACTCATAAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: SDSNGLEVPRPLFSQPGAHRQSF*GTHKGA
Trigger: AGCCCCCTTATGAGTACCCAAGAAGGACTGTCTATG...AGCCCCAGGTTGAGAGAACAGAGGCCTAGGGACCTCCAGACCATTGGAATCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CAA 90 bp GAGGCTGATGATATGACCAAGGCCACACAGCTGGCAAACAGTGATTCCAATGGTAGCCGGTCGAGAAATTaGACCTTCCTCTCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: EADDMTKATQLANSDSNGSRSRN*TFLSLG
Trigger: TCCCAGCGAGAGGAAGGTCAAATTTCTCGACCGGCT...ACCATTGGAATCACTGTTTGCCAGCTGTGTGGCCTTGGTCATATCATCAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247977.9
ENST00000588922.5
ENST00000589626.5
CDS-3UTR CAA 90 bp ATGAGCATATCGATCATTGAATCGCGAGTCTGCATCGCCTATCTCTCCGCGTCTCATAGACAGTCCTTCTaGGGTACTCATAAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: MSISIIESRVCIAYLSASHRQSF*GTHKGA
Trigger: AGCCCCCTTATGAGTACCCAAGAAGGACTGTCTATG...AGACGCGGAGAGATAGGCGATGCAGACTCGCGATTCAATGATCGATATGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247977.9
ENST00000586651.5
ENST00000588922.5
ENST00000589626.5
CDS CCA 72 bp CCCGGGCCCCGACACACAGTCCCAGGGTGGGAGAGGTaGTCTTCGGGGTCCGGGCACCGCGACCGCGGCCCA +
Preference number: 6 (lower is better)
Translates to: PGPRHTVPGWER*SSGSGHRDRGP
Trigger: TGGGCCGCGGTCGCGGTGCCCGGACCCCGAAGACCACCTCTCCCACCCTGGGACTGTGTGTCGGGGCCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586073.1
CDS CAA 90 bp CTGACAGGGCGGCGGCCGCGACCTTCCCGTAGCCGGTCGAGAAATTaGACCTTCCTCTCGCTGGGAAGTGATTCGGTCCCAGGGCCGGAC +
Preference number: 6 (lower is better)
Translates to: LTGRRPRPSRSRSRN*TFLSLGSDSVPGPD
Trigger: GTCCGGCCCTGGGACCGAATCACTTCCCAGCGAGAGGAAGGTCAAATTTCTCGACCGGCTACGGGAAGGTCGCGGCCGCCGCCCTGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247977.9
ENST00000586469.1
ENST00000588922.5
ENST00000589626.5
ENST00000590277.1
ENST00000592067.1
CDS TCA 72 bp CCGGTCGAGAAATTTGACCTTCCTCTCGCTGGGAAGTaGTTCGGTCCCAGGGCCGGACCAGCCGCGGATGGG +
Preference number: 6 (lower is better)
Translates to: PVEKFDLPLAGK*FGPRAGPAADG
Trigger: CCCATCCGCGGCTGGTCCGGCCCTGGGACCGAATCACTTCCCAGCGAGAGGAAGGTCAAATTTCTCGACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247977.9
ENST00000586469.1
ENST00000588922.5
ENST00000589626.5
ENST00000590277.1
ENST00000592067.1
CDS TCA 72 bp GGCGGCCGCGACCTTCCCGTAGCCGGTCGAGAAATTTaGCCTTCCTCTCGCTGGGAAGTGATTCGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: GGRDLPVAGREI*PSSRWEVIRSQ
Trigger: CTGGGACCGAATCACTTCCCAGCGAGAGGAAGGTCAAATTTCTCGACCGGCTACGGGAAGGTCGCGGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247977.9
ENST00000586469.1
ENST00000588922.5
ENST00000589626.5
ENST00000590277.1
ENST00000592067.1
CDS CAA 72 bp CGGCGGCCGCGACCTTCCCGTAGCCGGTCGAGAAATTaGACCTTCCTCTCGCTGGGAAGTGATTCGGTCCCA +
Preference number: 6 (lower is better)
Translates to: RRPRPSRSRSRN*TFLSLGSDSVP
Trigger: TGGGACCGAATCACTTCCCAGCGAGAGGAAGGTCAAATTTCTCGACCGGCTACGGGAAGGTCGCGGCCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247977.9
ENST00000586469.1
ENST00000588922.5
ENST00000589626.5
ENST00000590277.1
ENST00000592067.1
CDS TCA 72 bp GCAGGACCGAGTCCGGCAGTTCGACCAAAGTCGCCATaGTCCCGCCGACACGCACTTCCGCTTCCGGTTAAA +
Preference number: 6 (lower is better)
Translates to: AGPSPAVRPKSP*SRRHALPLPVK
Trigger: TTTAACCGGAAGCGGAAGTGCGTGTCGGCGGGATCATGGCGACTTTGGTCGAACTGCCGGACTCGGTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247977.9
ENST00000586469.1
ENST00000588922.5
ENST00000589626.5
ENST00000592067.1