RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBRS (Homo sapiens)

Ensembl gene IDs: ENSG00000156860

Ensembl transcript IDs: ENST00000287468.5, ENST00000356166.11, ENST00000468966.1, ENST00000482749.1, ENST00000484152.1, ENST00000494101.1, ENST00000498588.1, ENST00000543786.5, ENST00000570170.1

Found 572 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGAAGGCTGGGGTTaGTGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCC +
Preference number: 1 (lower is better)
Translates to: WAPAWRRLLLWEGWG*CREAAEEAACVAHP
Trigger: GGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR TCA 90 bp AGCCTGGAGGCGCCTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTaGGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGA +
Preference number: 1 (lower is better)
Translates to: SLEAPAALGRLGLLP*GCRRSCLCRPPLGR
Trigger: TCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAGGCGCCTCCAGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR CCA 90 bp CGCCCAAAGGGATCAATGTGGGTGCTGGGGCTCAGGAAGGGTCCGTaGGCCCCGGGAGCTGCCGTGAAAGGGTTGGCTGCAGCGTGGACG +
Preference number: 1 (lower is better)
Translates to: RPKGSMWVLGLRKGP*APGAAVKGLAAAWT
Trigger: CGTCCACGCTGCAGCCAACCCTTTCACGGCAGCTCCCGGGGCCCACGGACCCTTCCTGAGCCCCAGCACCCACATTGATCCCTTTGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CCA 90 bp GGGTGCTGCCAACCAGGTTGGCTCCAGGAAGCCAGCACAGCGATCTaGTGGGCTAGGGCCCAGAAACGGGGGCGGCCGGGGCCTCTCAAA +
Preference number: 1 (lower is better)
Translates to: GCCQPGWLQEASTAI*WARAQKRGRPGPLK
Trigger: TTTGAGAGGCCCCGGCCGCCCCCGTTTCTGGGCCCTAGCCCACCAGATCGCTGTGCTGGCTTCCTGGAGCCAACCTGGTTGGCAGCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR GCA 90 bp ACCCGCCTCATAGAAGCGGGGTGGCCTTGCCAGGCGTGGGGGTGCTaGCAACCAGGTTGGCTCCAGGAAGCCAGCACAGCGATCTGGTGG +
Preference number: 1 (lower is better)
Translates to: TRLIEAGWPCQAWGC*QPGWLQEASTAIWW
Trigger: CCACCAGATCGCTGTGCTGGCTTCCTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTCTATGAGGCGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR GCA 90 bp CTCACCCGCCTCATAGAAGCGGGGTGGCCTTGCCAGGCGTGGGGGTaGTGCCAACCAGGTTGGCTCCAGGAAGCCAGCACAGCGATCTGG +
Preference number: 1 (lower is better)
Translates to: LTRLIEAGWPCQAWG*CQPGWLQEASTAIW
Trigger: CCAGATCGCTGTGCTGGCTTCCTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTCTATGAGGCGGGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CCA 90 bp TGCTGCCAACCAGGTTGGCTCCAGGAAGCCAGCACAGCGATCTGGTaGGCTAGGGCCCAGAAACGGGGGCGGCCGGGGCCTCTCAAACAG +
Preference number: 1 (lower is better)
Translates to: CCQPGWLQEASTAIW*ARAQKRGRPGPLKQ
Trigger: CTGTTTGAGAGGCCCCGGCCGCCCCCGTTTCTGGGCCCTAGCCCACCAGATCGCTGTGCTGGCTTCCTGGAGCCAACCTGGTTGGCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR TCA 90 bp CCTCCTCCCCCAGCCCTCGGAGGGCATGAGGACTTGGGTGGTAGGTaGACGGGAGGGGGCACTTTGGCCTCTGGCTTAGTGAGCCCTTGG +
Preference number: 1 (lower is better)
Translates to: PPPPALGGHEDLGGR*TGGGTLASGLVSPW
Trigger: CCAAGGGCTCACTAAGCCAGAGGCCAAAGTGCCCCCTCCCGTTCACCTACCACCCAAGTCCTCATGCCCTCCGAGGGCTGGGGGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR CCA 90 bp TCCTCACCAGCCCGGGCCTTGGGAGTAGCAGGAGAAACTCGGAGCTaGGGCCGTGAGAAGGGGAGGTCCCTGTCCTTCTCCTCCTTGGTG +
Preference number: 1 (lower is better)
Translates to: SSPARALGVAGETRS*GREKGRSLSFSSLV
Trigger: CACCAAGGAGGAGAAGGACAGGGACCTCCCCTTCTCACGGCCCCAGCTCCGAGTTTCTCCTGCTACTCCCAAGGCCCGGGCTGGTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CCA 90 bp AGCCTCCTCCTTCCGCTCTTCCTTTACCCGCACAGATTCCTTGGTTaGCCGAGGCCCCTCCTCACCAGCCCGGGCCTTGGGAGTAGCAGG +
Preference number: 1 (lower is better)
Translates to: SLLLPLFLYPHRFLG*PRPLLTSPGLGSSR
Trigger: CCTGCTACTCCCAAGGCCCGGGCTGGTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAGGAGGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CCA 90 bp TGCTGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTaGGCCGACCCCCTTCTTTGGTGTGTGGTACATGGTGACCTTCTC +
Preference number: 1 (lower is better)
Translates to: CCREAAEEAACVAHP*ADPLLWCVVHGDLL
Trigger: GAGAAGGTCACCATGTACCACACACCAAAGAAGGGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR CCA 90 bp GAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCCTTCTTTaGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGG +
Preference number: 1 (lower is better)
Translates to: EEAACVAHPWADPLL*CVVHGDLLWPPLAW
Trigger: CCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCAAAGAAGGGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR CCA 90 bp CTTTGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTaGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGGCCCAG +
Preference number: 1 (lower is better)
Translates to: LWCVVHGDLLWPPLA*GRVLENRVQGSRAQ
Trigger: CTGGGCCCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR TCA 90 bp CTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCATGTaGTGCTTGGTCTTGTGGGGGTTGAGGCTTCTGTTCCCAGGTTCC +
Preference number: 1 (lower is better)
Translates to: LEAVTSALPVTLHSM*CLVLWGLRLLFPGS
Trigger: GGAACCTGGGAACAGAAGCCTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR GCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCGAAGCGGGGTGGCCTTaGCAGGCGTGGGGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: CREAAEEAACVAHPWADPEAGWP*QAWGCC
Trigger: GCAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTC...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCGGTTGGGCCCCAGCCTaGAGGCGCCTGCTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: CREAAEEAACVAHPWADPGWAPA*RRLLLW
Trigger: CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACC...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp GCTGGGGCTCAGGAAGGGTCCGTGGGCCCCGGGAGCTGCCGTGAAAGGGTTGGCAAGAGGGAGGCCGGGTaGGAGAGCTCCTGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: AGAQEGSVGPGSCRERVGKREAG*ESSCPG
Trigger: CCCTGGGCAGGAGCTCTCCCACCCGGCCTCCCTCTT...GCCAACCCTTTCACGGCAGCTCCCGGGGCCCACGGACCCTTCCTGAGCCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR TCA 90 bp CGGGCGGCCTCAGGGGGCCGGACCCAGGCAGGAAAGGTCAGAGGACTGCGGTGCCCATGGCCCCCGAGATaGGCCACACTCCCATGCACA +
Preference number: 2 (lower is better)
Translates to: RAASGGRTQAGKVRGLRCPWPPR*ATLPCT
Trigger: TGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGG...GCACCGCAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR GCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCCAGCCTGGAGGCGCCTaGTGCTTTGGGAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: CREAAEEAACVAHPWADPQPGGA*CFGKAG
Trigger: CCCAGCCTTCCCAAAGCAGCAGGCGCCTCCAGGCTG...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR GCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCCAGGCGTGGGGGTGCTaGCAACCAGGTTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: CREAAEEAACVAHPWADPQAWGC*QPGWLQ
Trigger: CTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTG...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR TCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCCCATGGCCCCCGAGATaGGCCACACTCCCATGCACA +
Preference number: 2 (lower is better)
Translates to: CREAAEEAACVAHPWADPPWPPR*ATLPCT
Trigger: TGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGG...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR GCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTGGGTGGGAGAGCTCCTaGCCAGGGGGCAGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAGWESS*PGGRAP
Trigger: TGGGGCCCTGCCCCCTGGGCAGGAGCTCTCCCACCC...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTGGCTTAGTGAGCCCTTaGGGAGGCAGGCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALGLVSP*GGRPRA
Trigger: GGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCC...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGCTCAGGAAGGGTCCGTaGGCCCCGGGAGCTGCCGTG +
Preference number: 2 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQLRKGP*APGAAV
Trigger: CACGGCAGCTCCCGGGGCCCACGGACCCTTCCTGAG...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR GCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCCTGTTGGTCATCTCCTaGTGGCCCCACCTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: CREAAEEAACVAHPWADPLLVIS*WPHLPR
Trigger: CCTGGGAAGGTGGGGCCAGCAGGAGATGACCAACAG...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTTGTGTCGCCCACCCCTaGGCCGACCCCCTTCTTTGG +
Preference number: 2 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALCVAHP*ADPLLW
Trigger: CCAAAGAAGGGGGTCGGCCCAGGGGTGGGCGACACA...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGGTTGGGCCCCAGCCTaGAGGCGCCTGCTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQGWAPA*RRLLLW
Trigger: CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACC...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR CAA 90 bp CGGGTCCAGTTAGCTCCTCACCCGCCTCATAGAAGCGGGGTGGCCTaGCCAGGCGTGGGGGTGCTGCCAACCAGGTTGGCTCCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: RVQLAPHPPHRSGVA*PGVGVLPTRLAPGS
Trigger: GCTTCCTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTCTATGAGGCGGGTGAGGAGCTAACTGGACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR TCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTTCCCAGGGAGAAGCCTaGCTGTCCCTTCCCGGCTCT +
Preference number: 2 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALSQGEA*LSLPGS
Trigger: AGAGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGA...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR GCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGGTGGGCCCCGGGAGCTaGCGTGAAAGGGTTGGCTGC +
Preference number: 2 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRVGPGS*RERVGC
Trigger: GCAGCCAACCCTTTCACGGCAGCTCCCGGGGCCCAC...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR GCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTGTCAGAGGACTGCGGTaGAGGCGGCCCCATGGGTCC +
Preference number: 2 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAVRGLR*RRPHGS
Trigger: GGACCCATGGGGCCGCCTGCACCGCAGTCCTCTGAC...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCGGTTGGGCCCCAGCCTaGAGGCGCCTGCTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: LLLWEGWGCCREAAEEAAGWAPA*RRLLLW
Trigger: CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACC...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp CGGGCGGCCTCAGGGGGCCGGACCCAGGCAGGAAAGGTCAGAGGACTGCGGTGCCCAAAGGGATCAATGTaGGTGCTGGGGCTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: RAASGGRTQAGKVRGLRCPKGSM*VLGLRK
Trigger: CTTCCTGAGCCCCAGCACCCACATTGATCCCTTTGG...GCACCGCAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CAA 90 bp ACAGATTCCTTGGTTGGCCGAGGCCCCTCCTCACCAGCCCGGGCCTaGGGAGTAGCAGGAGAAACTCGGAGCTGGGGCCGTGAGAAGGGG +
Preference number: 2 (lower is better)
Translates to: TDSLVGRGPSSPARA*GVAGETRSWGREKG
Trigger: CCCCTTCTCACGGCCCCAGCTCCGAGTTTCTCCTGCTACTCCCAAGGCCCGGGCTGGTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CAA 90 bp GCGGCAGCCTCCTCCTTCCGCTCTTCCTTTACCCGCACAGATTCCTaGGTTGGCCGAGGCCCCTCCTCACCAGCCCGGGCCTTGGGAGTA +
Preference number: 2 (lower is better)
Translates to: AAASSFRSSFTRTDS*VGRGPSSPARALGV
Trigger: TACTCCCAAGGCCCGGGCTGGTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAGGAGGAGGCTGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR TCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGCGGCACCAGTCGCAGTaGAGAGGGAGGCCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQRHQSQ*RGRPGG
Trigger: CCCACCCGGCCTCCCTCTTCACTGCGACTGGTGCCG...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR TCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGCCCCGGGAGCTGCCGTaGAAGGGTTGGCTGCAGCGT +
Preference number: 2 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQPRELP*KGWLQR
Trigger: ACGCTGCAGCCAACCCTTTCACGGCAGCTCCCGGGG...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR TCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGTCTTGCTGAGAAGGTaGGGGGTTCCCGGGGCCGCA +
Preference number: 2 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWVLLRR*GVPGAA
Trigger: TGCGGCCCCGGGAACCCCTCACCTTCTCAGCAAGAC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR GCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTGAAGGCTGGGGTTGCTaGCGTGAGGCTGCCGAAGAA +
Preference number: 2 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALEGWGC*REAAEE
Trigger: TTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTC...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTTTGGTCATCTCCTGCTaGCCCCACCTTCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALLVISC*PHLPRE
Trigger: CTCCCTGGGAAGGTGGGGCCAGCAGGAGATGACCAA...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTCATGGTGACCTTCTCTaGCCACCCTTAGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALHGDLL*PPLAWG
Trigger: GCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATG...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGAGGCGCCTGCTGCTTTaGGAAGGCTGGGGTTGCTGC +
Preference number: 2 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQRRLLL*EGWGCC
Trigger: GCAGCAACCCCAGCCTTCCCAAAGCAGCAGGCGCCT...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGCCCCATGGGTCCGGTaGGGAGGCGAAGGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQAPWVR*GGEGWW
Trigger: CCACCAGCCTTCGCCTCCCCACCGGACCCATGGGGC...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCGGGCACAAGCGGAGGTaGTGCCCCCAAAAGGGCTCC +
Preference number: 2 (lower is better)
Translates to: LLLWEGWGCCREAAEEAAGHKRR*CPQKGS
Trigger: GGAGCCCTTTTGGGGGCACCACCTCCGCTTGTGCCC...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR TCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTCCATGGCCCCCGAGATaGGCCACACTCCCATGCACA +
Preference number: 2 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAPWPPR*ATLPCT
Trigger: TGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGG...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCTCCCAGGGAGAAGCCTaGCTGTCCCTTCCCGGCTCT +
Preference number: 2 (lower is better)
Translates to: LLLWEGWGCCREAAEEAASQGEA*LSLPGS
Trigger: AGAGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGA...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTAGGCCGCTCCTTGTCTaGGCCTGGAGTCCGGGCGGC +
Preference number: 2 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVRPLLV*AWSPGG
Trigger: GCCGCCCGGACTCCAGGCTCAGACAAGGAGCGGCCT...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR TCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTCCTTCTCCTCCTTGGTaGTGGAGGGCTCCCTCCGCT +
Preference number: 2 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAPSPPW*WRAPSA
Trigger: AGCGGAGGGAGCCCTCCATCACCAAGGAGGAGAAGG...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR GCA 90 bp GCTGTAGAGCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACCGTGAAAGGGTTGGCTaGAGCGTGGACGGCACCAGT +
Preference number: 2 (lower is better)
Translates to: AVEQGVSRFQTVEAGSGHRERVG*SVDGTS
Trigger: ACTGGTGCCGTCCACGCTGCAGCCAACCCTTTCACG...GTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGCTCTACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp GCTGTAGAGCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACCTGAGCCTTTGGGGGTaGGGGCAGAGTGAACGGGAA +
Preference number: 2 (lower is better)
Translates to: AVEQGVSRFQTVEAGSGHLSLWG*GQSERE
Trigger: TTCCCGTTCACTCTGCCCCCACCCCCAAAGGCTCAG...GTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGCTCTACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp CTTGCCAGGCGTGGGGGTGCTGCCAACCAGGTTGGCTCCAGGAAGCCAGCACAGGGCTGGTGGGGCCCCTaGGCTTTCTTTCTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: LARRGGAANQVGSRKPAQGWWGP*AFFLGK
Trigger: TTTGCCCAGAAAGAAAGCCCAGGGGCCCCACCAGCC...CTGTGCTGGCTTCCTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTGGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CAA 90 bp GGCCTCCAAAGGCCCCGTTGGAGAGGGCAGCCAAAGAGGCGAAGCTaGTGGGACGCCCAAAGGGATCAATGTGGGTGCTGGGGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: GLQRPRWRGQPKRRS*WDAQRDQCGCWGSG
Trigger: TCCTGAGCCCCAGCACCCACATTGATCCCTTTGGGCGTCCCACAAGCTTCGCCTCTTTGGCTGCCCTCTCCAACGGGGCCTTTGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR TCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCCTGAGATTTAGAGGCTaGGCCTTTGGGGGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: LLLWEGWGCCREAAEEAALRFRG*AFGGGG
Trigger: GCCCCCACCCCCAAAGGCTCAGCCTCTAAATCTCAG...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR GCA 90 bp GCTGTAGAGCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACAGGGATCAATGTGGGTaGTGGGGCTCAGGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: AVEQGVSRFQTVEAGSGHRDQCG*WGSGRV
Trigger: GACCCTTCCTGAGCCCCAGCACCCACATTGATCCCT...GTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGCTCTACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp GCTGTAGAGCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACGAGGGCATGAGGACTTaGGTGGTAGGTGAACGGGAG +
Preference number: 2 (lower is better)
Translates to: AVEQGVSRFQTVEAGSGHEGMRT*VVGERE
Trigger: CTCCCGTTCACCTACCACCCAAGTCCTCATGCCCTC...GTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGCTCTACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCCTGAGCCTTTGGGGGTaGGGGCAGAGTGAACGGGAA +
Preference number: 2 (lower is better)
Translates to: LLLWEGWGCCREAAEEAALSLWG*GQSERE
Trigger: TTCCCGTTCACTCTGCCCCCACCCCCAAAGGCTCAG...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCCTGCTTTGGGAAGGCTaGGGTTGCTGCCGTGAGGCT +
Preference number: 2 (lower is better)
Translates to: LLLWEGWGCCREAAEEAALLWEG*GCCREA
Trigger: AGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAG...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCCCCTGCCTTCTAGGTTaGGCCCCAGCCTGGAGGCGC +
Preference number: 2 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSPCLLG*APAWRR
Trigger: GCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGG...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGCTCCAAAGGCCCCGTTaGAGAGGGCAGCCAAAGAGG +
Preference number: 2 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWLQRPR*RGQPKR
Trigger: CCTCTTTGGCTGCCCTCTCCAACGGGGCCTTTGGAG...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp CGGCGGCGGCAGCCTCCTCCTTCCGCTCTTCCTTTACCCGCACAGATTCCTTGGCCTGGGCTTTCTTTCTaGGCAAAGACGGCGCCGGAG +
Preference number: 2 (lower is better)
Translates to: RRRQPPPSALPLPAQIPWPGLSF*AKTAPE
Trigger: CTCCGGCGCCGTCTTTGCCCAGAAAGAAAGCCCAGG...CCAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAGGAGGAGGCTGCCGCCGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACGTGCAGGCGGCCCCATaGGTCCGGTGGGGAGGCGAA +
Preference number: 2 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENVQAAP*VRWGGE
Trigger: TTCGCCTCCCCACCGGACCCATGGGGCCGCCTGCAC...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CAA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTaGGAGAACAGGGTTCAGGGAAGCAGGGCCCAGGAGTCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: VHGDLLWPPLAWGRV*ENRVQGSRAQESWG
Trigger: CCCCCAGGACTCCTGGGCCCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGTGGCTGGTGAGGTTATaGCCTTTGCCCTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRWLVRL*PLPSSP
Trigger: AGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCA...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTTGGCTGGTGAGGTTATaGCCTTTGCCCTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAWLVRL*PLPSSP
Trigger: AGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCA...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp GCTGTAGAGCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACACCCTACACTCCATGTaGTGCTTGGTCTTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: AVEQGVSRFQTVEAGSGHTLHSM*CLVLWG
Trigger: CCCCCACAAGACCAAGCATCACATGGAGTGTAGGGT...GTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGCTCTACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR TCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGTCCCAGGGAGAAGCCTaGCTGTCCCTTCCCGGCTCT +
Preference number: 2 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQSQGEA*LSLPGS
Trigger: AGAGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGA...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGTGGGGTGAAGGGGACTaGGCCATTAAGAGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWWGEGD*AIKRWW
Trigger: CCACCACCTCTTAATGGCTCAGTCCCCTTCACCCCA...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGTGTGTGGTACATGGTaGCCTTCTCTGGCCACCCTT +
Preference number: 2 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQVCGTW*PSLATL
Trigger: AAGGGTGGCCAGAGAAGGTCACCATGTACCACACAC...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTCTGGGGTTGCTGCCGTaGGGCTGCCGAAGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVLGLLP*GCRRSC
Trigger: GCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAG...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR GCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCGGCTGCCGAAGAAGCTaGCTGTGTCGCCCACCCCTG +
Preference number: 2 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSGCRRS*LCRPPL
Trigger: CAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCC...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR GCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCCAGCCTGGAGGCGCCTaGTGCTTTGGGAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSQPGGA*CFGKAG
Trigger: CCCAGCCTTCCCAAAGCAGCAGGCGCCTCCAGGCTG...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR GCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGGAAAGGTCAGAGGACTaGGGTGCAGGCGGCCCCATG +
Preference number: 2 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRERSED*GAGGPM
Trigger: CATGGGGCCGCCTGCACCGCAGTCCTCTGACCTTTC...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTCTCAGCCCTAGGACCTaGTTAAAGGAAGGGGAGATG +
Preference number: 2 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALLSPRT*LKEGEM
Trigger: CATCTCCCCTTCCTTTAACCAGGTCCTAGGGCTGAG...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTGATCAATGTGGGTGCTaGGGCTCAGGAAGGGTCCGT +
Preference number: 2 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPDQCGC*GSGRVR
Trigger: ACGGACCCTTCCTGAGCCCCAGCACCCACATTGATC...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR TCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGTGGTCTTGTGGGGGTTaGGGCTTCTGTTCCCAGGTT +
Preference number: 2 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRWSCGG*GFCSQV
Trigger: AACCTGGGAACAGAAGCCTCAACCCCCACAAGACCA...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCTGGTCTTGTGGGGGTTaGGGCTTCTGTTCCCAGGTT +
Preference number: 2 (lower is better)
Translates to: LLLWEGWGCCREAAEEAAWSCGG*GFCSQV
Trigger: AACCTGGGAACAGAAGCCTCAACCCCCACAAGACCA...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACACCCTACACTCCATGTaGTGCTTGGTCTTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHTLHSM*CLVLWG
Trigger: CCCCCACAAGACCAAGCATCACATGGAGTGTAGGGT...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTCCTCTGCTCTCCCAGTaGCCCTACACTCCATGTGAT +
Preference number: 2 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAPLLSQ*PYTPCD
Trigger: ATCACATGGAGTGTAGGGTCACTGGGAGAGCAGAGG...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGCCTCTGCTCTCCCAGTaGCCCTACACTCCATGTGAT +
Preference number: 2 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRPLLSQ*PYTPCD
Trigger: ATCACATGGAGTGTAGGGTCACTGGGAGAGCAGAGG...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGACTTGGGTGGTAGGTaGACGGGAGGGGGCACTTTG +
Preference number: 2 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQDLGGR*TGGGTL
Trigger: CAAAGTGCCCCCTCCCGTTCACCTACCACCCAAGTC...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR GCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGCTGTTGGTCATCTCCTaGTGGCCCCACCTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQLLVIS*WPHLPR
Trigger: CCTGGGAAGGTGGGGCCAGCAGGAGATGACCAACAG...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGGGCTTAGTGAGCCCTTaGGGAGGCAGGCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEGLVSP*GGRPRA
Trigger: GGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCC...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGCAGGAAGGGAACTGTTaGGAGGGGCACCCCTGTAAA +
Preference number: 2 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWQEGNC*EGHPCK
Trigger: TTTACAGGGGTGCCCCTCCCAACAGTTCCCTTCCTG...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGTTGGTCATCTCCTGCTaGCCCCACCTTCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRLVISC*PHLPRE
Trigger: CTCCCTGGGAAGGTGGGGCCAGCAGGAGATGACCAA...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGCCTGGGGCAGGGTTTTaGAGAACAGGGTTCAGGGAA +
Preference number: 2 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWPGAGF*RTGFRE
Trigger: TTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGG...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCCCTGCCTTCTAGGTTaGGCCCCAGCCTGGAGGCGC +
Preference number: 2 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAPCLLG*APAWRR
Trigger: GCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGG...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAACCCTGCCTTCTAGGTTaGGCCCCAGCCTGGAGGCGC +
Preference number: 2 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKPCLLG*APAWRR
Trigger: GCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGG...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGTGGCTGGTGAGGTTATaGCCTTTGCCCTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQWLVRL*PLPSSP
Trigger: AGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCA...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTGACTTGGGTGGTAGGTaGACGGGAGGGGGCACTTTG +
Preference number: 2 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVDLGGR*TGGGTL
Trigger: CAAAGTGCCCCCTCCCGTTCACCTACCACCCAAGTC...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAAGGGGTGGGGGCAGAGTaGACGGGAACATGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKGVGAE*TGTCWG
Trigger: CCCCCAACATGTTCCCGTTCACTCTGCCCCCACCCC...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGAGAGGTGGTGGAGTCTaGGATTTAGAGGCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWRGGGV*DLEAEP
Trigger: AGGCTCAGCCTCTAAATCTCAGACTCCACCACCTCT...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTGGGGTTGCTGCCGTaGGGCTGCCGAAGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFALGLLP*GCRRSC
Trigger: GCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAG...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTAGGGTTTTGTTAGATTaGCCCCTGCCTTCTAGGTTG +
Preference number: 2 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALRVLLD*PLPSRL
Trigger: CAACCTAGAAGGCAGGGGTCAATCTAACAAAACCCT...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR GCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAAGGCTGCCGAAGAAGCTaGCTGTGTCGCCCACCCCTG +
Preference number: 2 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKGCRRS*LCRPPL
Trigger: CAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCC...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR GCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAACACAAGCGGAGGTGGTaGCCCCAAAAGGGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKHKRRW*PQKGSR
Trigger: CCGGGAGCCCTTTTGGGGGCACCACCTCCGCTTGTG...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCGGGCACTTTGGCCTCTaGCTTAGTGAGCCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSGHFGL*LSEPLG
Trigger: CCCCAAGGGCTCACTAAGCCAGAGGCCAAAGTGCCC...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTGGGCACTTTGGCCTCTaGCTTAGTGAGCCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVGHFGL*LSEPLG
Trigger: CCCCAAGGGCTCACTAAGCCAGAGGCCAAAGTGCCC...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGTCATCTCCTGCTaGCCCCACCTTCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVLVISC*PHLPRE
Trigger: CTCCCTGGGAAGGTGGGGCCAGCAGGAGATGACCAA...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAAGGTCCTGCCCCCTGTTaGTCATCTCCTGCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKGPAPC*SSPAGP
Trigger: GGGGCCAGCAGGAGATGACCAACAGGGGGCAGGACC...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTCCCTTCTTTGGTGTGTaGTACATGGTGACCTTCTCT +
Preference number: 2 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALPFFGV*YMVTFS
Trigger: AGAGAAGGTCACCATGTACCACACACCAAAGAAGGG...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTCACAGATTCCTTGGTTaGCCGAGGCCCCTCCTCACC +
Preference number: 2 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVHRFLG*PRPLLT
Trigger: GGTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTG...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTAGCACAGCGATCTGGTaGGCTAGGGCCCAGAAACGG +
Preference number: 2 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVSTAIW*ARAQKR
Trigger: CCGTTTCTGGGCCCTAGCCCACCAGATCGCTGTGCT...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGCAAAAGGGCTCCCGGTaGGGTCTTGCTGAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQQKGSR*GLAEKV
Trigger: CACCTTCTCAGCAAGACCCCACCGGGAGCCCTTTTG...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR TCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACGACTTGGGTGGTAGGTaGACGGGAGGGGGCACTTTG +
Preference number: 2 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENDLGGR*TGGGTL
Trigger: CAAAGTGCCCCCTCCCGTTCACCTACCACCCAAGTC...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGAGGGTTTTGTTAGATTaGCCCCTGCCTTCTAGGTTG +
Preference number: 2 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQRVLLD*PLPSRL
Trigger: CAACCTAGAAGGCAGGGGTCAATCTAACAAAACCCT...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR GCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCTGGGAAGGCTGGGGTTaGTGCCGTGAGGCTGCCGAA +
Preference number: 2 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAWEGWG*CREAAE
Trigger: TTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCA...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR GCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAACCTGGAGGCGCCTGCTaGTTTGGGAAGGCTGGGGTT +
Preference number: 2 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKPGGAC*FGKAGV
Trigger: AACCCCAGCCTTCCCAAAGCAGCAGGCGCCTCCAGG...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGTTTGCCCTCCAGCCCTaGCTTAAAACCTCAGCCCTA +
Preference number: 2 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQFALQP*LKTSAL
Trigger: TAGGGCTGAGGTTTTAAGCCAGGGCTGGAGGGCAAA...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCGAGGGCATGAGGACTTaGGTGGTAGGTGAACGGGAG +
Preference number: 2 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSEGMRT*VVGERE
Trigger: CTCCCGTTCACCTACCACCCAAGTCCTCATGCCCTC...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCGGAGAAACTCGGAGCTaGGGCCGTGAGAAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAGETRS*GREKGR
Trigger: CCTCCCCTTCTCACGGCCCCAGCTCCGAGTTTCTCC...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGCCCGCACAGATTCCTTaGTTGGCCGAGGCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEPAQIP*LAEAPP
Trigger: AGGAGGGGCCTCGGCCAACCAAGGAATCTGTGCGGG...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR TCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTGTGTGTGGTACATGGTaGCCTTCTCTGGCCACCCTT +
Preference number: 2 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVVCGTW*PSLATL
Trigger: AAGGGTGGCCAGAGAAGGTCACCATGTACCACACAC...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCCCTGGGGCAGGGTTTTaGAGAACAGGGTTCAGGGAA +
Preference number: 2 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSPGAGF*RTGFRE
Trigger: TTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGG...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACACCCTACACTCCATGTaGTGCTTGGTCTTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENTLHSM*CLVLWG
Trigger: CCCCCACAAGACCAAGCATCACATGGAGTGTAGGGT...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCTGGGGTGAAGGGGACTaGGCCATTAAGAGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAWGEGD*AIKRWW
Trigger: CCACCACCTCTTAATGGCTCAGTCCCCTTCACCCCA...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCCTCAGCCCTAGGACCTaGTTAAAGGAAGGGGAGATG +
Preference number: 2 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSLSPRT*LKEGEM
Trigger: CATCTCCCCTTCCTTTAACCAGGTCCTAGGGCTGAG...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGGAGGGCATGAGGACTTaGGTGGTAGGTGAACGGGAG +
Preference number: 2 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEEGMRT*VVGERE
Trigger: CTCCCGTTCACCTACCACCCAAGTCCTCATGCCCTC...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAATGGCCACCCTTAGCCTaGGGCAGGGTTTTGGAGAAC +
Preference number: 2 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKWPPLA*GRVLEN
Trigger: GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR TCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGAGGTGGTGGAGTCTaGGATTTAGAGGCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENRGGGV*DLEAEP
Trigger: AGGCTCAGCCTCTAAATCTCAGACTCCACCACCTCT...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCAGGAAGGGAACTGTTaGGAGGGGCACCCCTGTAAA +
Preference number: 2 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAQEGNC*EGHPCK
Trigger: TTTACAGGGGTGCCCCTCCCAACAGTTCCCTTCCTG...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCAGCCCTAGGACCTaGTTAAAGGAAGGGGAGATG +
Preference number: 2 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFALSPRT*LKEGEM
Trigger: CATCTCCCCTTCCTTTAACCAGGTCCTAGGGCTGAG...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAATTTGCCCTCCAGCCCTaGCTTAAAACCTCAGCCCTA +
Preference number: 2 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKFALQP*LKTSAL
Trigger: TAGGGCTGAGGTTTTAAGCCAGGGCTGGAGGGCAAA...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAAATGTACAAAAGGTCTTaGGGCTATGTGAAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKMYKRS*GYVKGV
Trigger: CACCCCTTTCACATAGCCCCAAGACCTTTTGTACAT...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCGAAAGTCAAGCTTGTaGGAGTCACCCTTCATTTTC +
Preference number: 2 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFARKSSL*ESPFIF
Trigger: GAAAATGAAGGGTGACTCCCACAAGCTTGACTTTCG...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR GCA 72 bp GCTGGGGCTCAGGAAGGGTCCGTGGGCCCCGGGAGCTaGCGTGAAAGGGTTGGCTGCAGCGTGGACGGCACC +
Preference number: 3 (lower is better)
Translates to: AGAQEGSVGPGS*RERVGCSVDGT
Trigger: GGTGCCGTCCACGCTGCAGCCAACCCTTTCACGGCAGCTCCCGGGGCCCACGGACCCTTCCTGAGCCCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR GCA 72 bp GGCCGGACCCAGGCAGGAAAGGTCAGAGGACTGCGGTaGAGGCGGCCCCATGGGTCCGGTGGGGAGGCGAAG +
Preference number: 3 (lower is better)
Translates to: GRTQAGKVRGLR*RRPHGSGGEAK
Trigger: CTTCGCCTCCCCACCGGACCCATGGGGCCGCCTGCACCGCAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR TCA 72 bp GGCTCAGGAAGGGTCCGTGGGCCCCGGGAGCTGCCGTaGAAGGGTTGGCTGCAGCGTGGACGGCACCAGTCG +
Preference number: 3 (lower is better)
Translates to: GSGRVRGPRELP*KGWLQRGRHQS
Trigger: CGACTGGTGCCGTCCACGCTGCAGCCAACCCTTTCACGGCAGCTCCCGGGGCCCACGGACCCTTCCTGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CAA 90 bp GGAGTCCGGGCGGCCTCAGGGGGCCGGACCCAGGCAGGAAAGGTCAGAGGACTGGCTGCCGTGAAAGGGTaGGCTGCAGCGTGGACGGCA +
Preference number: 3 (lower is better)
Translates to: GVRAASGGRTQAGKVRGLAAVKG*AAAWTA
Trigger: TGCCGTCCACGCTGCAGCCAACCCTTTCACGGCAGC...CAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCGGACTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CAA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCTCACCAGCCCGGGCCTaGGGAGTAGCAGGAGAAACT +
Preference number: 3 (lower is better)
Translates to: CREAAEEAACVAHPWADPSPARA*GVAGET
Trigger: AGTTTCTCCTGCTACTCCCAAGGCCCGGGCTGGTGA...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR TCA 72 bp GCGCCTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTaGGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCC +
Preference number: 3 (lower is better)
Translates to: APAALGRLGLLP*GCRRSCLCRPP
Trigger: GGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR GCA 72 bp TCCGTGGGCCCCGGGAGCTGCCGTGAAAGGGTTGGCTaGAGCGTGGACGGCACCAGTCGCAGTGAAGAGGGA +
Preference number: 3 (lower is better)
Translates to: SVGPGSCRERVG*SVDGTSRSEEG
Trigger: TCCCTCTTCACTGCGACTGGTGCCGTCCACGCTGCAGCCAACCCTTTCACGGCAGCTCCCGGGGCCCACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CCA 72 bp ACCCGCCTCATAGAAGCGGGGTGGCCTTGCCAGGCGTaGGGGTGCTGCCAACCAGGTTGGCTCCAGGAAGCC +
Preference number: 3 (lower is better)
Translates to: TRLIEAGWPCQA*GCCQPGWLQEA
Trigger: GGCTTCCTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTCTATGAGGCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CAA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGAGGTCCTGCCCCCTGTaGGTCATCTCCTGCTGGCCC +
Preference number: 3 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQRSCPL*VISCWP
Trigger: GGGCCAGCAGGAGATGACCAACAGGGGGCAGGACCT...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR GCA 72 bp ATAGAAGCGGGGTGGCCTTGCCAGGCGTGGGGGTGCTaGCAACCAGGTTGGCTCCAGGAAGCCAGCACAGCG +
Preference number: 3 (lower is better)
Translates to: IEAGWPCQAWGC*QPGWLQEASTA
Trigger: CGCTGTGCTGGCTTCCTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTCTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CCA 72 bp GGATCAATGTGGGTGCTGGGGCTCAGGAAGGGTCCGTaGGCCCCGGGAGCTGCCGTGAAAGGGTTGGCTGCA +
Preference number: 3 (lower is better)
Translates to: GSMWVLGLRKGP*APGAAVKGLAA
Trigger: TGCAGCCAACCCTTTCACGGCAGCTCCCGGGGCCCACGGACCCTTCCTGAGCCCCAGCACCCACATTGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CCA 72 bp GCCCGGGCCTTGGGAGTAGCAGGAGAAACTCGGAGCTaGGGCCGTGAGAAGGGGAGGTCCCTGTCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: ARALGVAGETRS*GREKGRSLSFS
Trigger: GGAGAAGGACAGGGACCTCCCCTTCTCACGGCCCCAGCTCCGAGTTTCTCCTGCTACTCCCAAGGCCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CAA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCTTGGTCTTGTGGGGGTaGAGGCTTCTGTTCCCAGGT +
Preference number: 3 (lower is better)
Translates to: CREAAEEAACVAHPWADPLVLWG*RLLFPG
Trigger: ACCTGGGAACAGAAGCCTCAACCCCCACAAGACCAA...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CAA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGAAGACGGCGCCGGAGTaGAATGTGGGGCTGCCCAGG +
Preference number: 3 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWKTAPE*NVGLPR
Trigger: CCTGGGCAGCCCCACATTCAACTCCGGCGCCGTCTT...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CAA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGCACAGATTCCTTGGTaGGCCGAGGCCCCTCCTCAC +
Preference number: 3 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQAQIPW*AEAPPH
Trigger: GTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTGC...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR TCA 72 bp GTGAGAAGGGGAGGTCCCTGTCCTTCTCCTCCTTGGTaGTGGAGGGCTCCCTCCGCTCCACAGGCCGCTCCT +
Preference number: 3 (lower is better)
Translates to: VRRGGPCPSPPW*WRAPSAPQAAP
Trigger: AGGAGCGGCCTGTGGAGCGGAGGGAGCCCTCCATCACCAAGGAGGAGAAGGACAGGGACCTCCCCTTCTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR GCA 72 bp CTCATAGAAGCGGGGTGGCCTTGCCAGGCGTGGGGGTaGTGCCAACCAGGTTGGCTCCAGGAAGCCAGCACA +
Preference number: 3 (lower is better)
Translates to: LIEAGWPCQAWG*CQPGWLQEAST
Trigger: TGTGCTGGCTTCCTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTCTATGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CCA 72 bp CTTCCGCTCTTCCTTTACCCGCACAGATTCCTTGGTTaGCCGAGGCCCCTCCTCACCAGCCCGGGCCTTGGG +
Preference number: 3 (lower is better)
Translates to: LPLFLYPHRFLG*PRPLLTSPGLG
Trigger: CCCAAGGCCCGGGCTGGTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CCA 72 bp CCTCCTTCCGCTCTTCCTTTACCCGCACAGATTCCTTaGTTGGCCGAGGCCCCTCCTCACCAGCCCGGGCCT +
Preference number: 3 (lower is better)
Translates to: PPSALPLPAQIP*LAEAPPHQPGP
Trigger: AGGCCCGGGCTGGTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CAA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGACGGGAGGGGGCACTTaGGCCTCTGGCTTAGTGAGC +
Preference number: 3 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWTGGGT*ASGLVS
Trigger: GCTCACTAAGCCAGAGGCCAAAGTGCCCCCTCCCGT...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CAA 90 bp CTTGCCAGGCGTGGGGGTGCTGCCAACCAGGTTGGCTCCAGGAAGCCAGCACAGGTGAACGGGAACATGTaGGGGGAACCGGGGCTGTCA +
Preference number: 3 (lower is better)
Translates to: LARRGGAANQVGSRKPAQVNGNM*GEPGLS
Trigger: TGACAGCCCCGGTTCCCCCAACATGTTCCCGTTCAC...CTGTGCTGGCTTCCTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTGGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CAA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGACCCGCACAGATTCCTaGGTTGGCCGAGGCCCCTCC +
Preference number: 3 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQTRTDS*VGRGPS
Trigger: GGAGGGGCCTCGGCCAACCAAGGAATCTGTGCGGGT...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CCA 72 bp GAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTaGGCCGACCCCCTTCTTTGGTGTGTGGTACATGGT +
Preference number: 3 (lower is better)
Translates to: EAAEEAACVAHP*ADPLLWCVVHG
Trigger: ACCATGTACCACACACCAAAGAAGGGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CAA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCGTGAACGGGAACATGTaGGGGGAACCGGGGCTGTCA +
Preference number: 3 (lower is better)
Translates to: LLLWEGWGCCREAAEEAAVNGNM*GEPGLS
Trigger: TGACAGCCCCGGTTCCCCCAACATGTTCCCGTTCAC...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CAA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGCCTGGGGCAGGGTTTaGGAGAACAGGGTTCAGGGA +
Preference number: 3 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWAWGRV*ENRVQG
Trigger: TCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CAA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCGCCTGGGGCAGGGTTTaGGAGAACAGGGTTCAGGGA +
Preference number: 3 (lower is better)
Translates to: LLLWEGWGCCREAAEEAAAWGRV*ENRVQG
Trigger: TCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGC...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CAA 90 bp CGGCGGCGGCAGCCTCCTCCTTCCGCTCTTCCTTTACCCGCACAGATTCCTTGGCCAAAGAGGCGAAGCTaGTGGGACGCCCAAAGGGAT +
Preference number: 3 (lower is better)
Translates to: RRRQPPPSALPLPAQIPWPKRRS*WDAQRD
Trigger: ATCCCTTTGGGCGTCCCACAAGCTTCGCCTCTTTGG...CCAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAGGAGGAGGCTGCCGCCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CAA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTCCACAGGCCGCTCCTaGTCTGAGCCTGGAGTCCGG +
Preference number: 3 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVSTGRS*SEPGVR
Trigger: CCGGACTCCAGGCTCAGACAAGGAGCGGCCTGTGGA...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CAA 90 bp CGGCGGCGGCAGCCTCCTCCTTCCGCTCTTCCTTTACCCGCACAGATTCCTTGGTTGGTCTTGTGGGGGTaGAGGCTTCTGTTCCCAGGT +
Preference number: 3 (lower is better)
Translates to: RRRQPPPSALPLPAQIPWLVLWG*RLLFPG
Trigger: ACCTGGGAACAGAAGCCTCAACCCCCACAAGACCAA...CCAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAGGAGGAGGCTGCCGCCGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR-3UTR CAA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTGTGAACGGGAACATGTaGGGGGAACCGGGGCTGTCA +
Preference number: 3 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVVNGNM*GEPGLS
Trigger: TGACAGCCCCGGTTCCCCCAACATGTTCCCGTTCAC...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CAA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTGCCTGGGGCAGGGTTTaGGAGAACAGGGTTCAGGGA +
Preference number: 3 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVAWGRV*ENRVQG
Trigger: TCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGC...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CAA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCGAGGCGCCTGCTGCTTaGGGAAGGCTGGGGTTGCTG +
Preference number: 3 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAEAPAA*GRLGLL
Trigger: CAGCAACCCCAGCCTTCCCAAAGCAGCAGGCGCCTC...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CAA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGGAGGCGCCTGCTGCTTaGGGAAGGCTGGGGTTGCTG +
Preference number: 3 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEEAPAA*GRLGLL
Trigger: CAGCAACCCCAGCCTTCCCAAAGCAGCAGGCGCCTC...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CAA 90 bp CGGCGGCGGCAGCCTCCTCCTTCCGCTCTTCCTTTACCCGCACAGATTCCTTGGTTCCGAAAGTCAAGCTaGTGGGAGTCACCCTTCATT +
Preference number: 3 (lower is better)
Translates to: RRRQPPPSALPLPAQIPWFRKSS*WESPFI
Trigger: AATGAAGGGTGACTCCCACAAGCTTGACTTTCGGAA...CCAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAGGAGGAGGCTGCCGCCGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CCA 72 bp GTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTaGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: VVHGDLLWPPLA*GRVLENRVQGS
Trigger: GCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR TCA 72 bp GCCATTAAGAGGTGGTGGAGTCTGAGATTTAGAGGCTaGGCCTTTGGGGGTGGGGGCAGAGTGAACGGGAAC +
Preference number: 3 (lower is better)
Translates to: AIKRWWSLRFRG*AFGGGGRVNGN
Trigger: GTTCCCGTTCACTCTGCCCCCACCCCCAAAGGCTCAGCCTCTAAATCTCAGACTCCACCACCTCTTAATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
3UTR-3UTR CAA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGTTGGTCTTGTGGGGGTaGAGGCTTCTGTTCCCAGGT +
Preference number: 3 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVELVLWG*RLLFPG
Trigger: ACCTGGGAACAGAAGCCTCAACCCCCACAAGACCAA...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACGGCCCCGGGCCCCATGGGTCCGGTaGGGAGGCGAAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ARGEQVPDRRGGQRPRPRAPWVR*GGEGWW
Trigger: CCACCAGCCTTCGCCTCCCCACCGGACCCATGGGGC...CCGGGGCCGTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR GCA 90 bp GGAGTCCGGGCGGCCTCAGGGGGCCGGACCCAGGCAGGAAAGGTCAGAGGACTGGAAGCGGGGTGGCCTTaGCAGGCGTGGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GVRAASGGRTQAGKVRGLEAGWP*QAWGCC
Trigger: GCAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTC...CAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCGGACTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp GCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACGGCCCCGGAAGAGGGAGGCCGGGTaGGAGAGCTCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ARGEQVPDRRGGQRPRPRKREAG*ESSCPG
Trigger: CCCTGGGCAGGAGCTCTCCCACCCGGCCTCCCTCTT...CCGGGGCCGTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp GCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACGGCCCCGGGGTTGGGCCCCAGCCTaGAGGCGCCTGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ARGEQVPDRRGGQRPRPRGWAPA*RRLLLW
Trigger: CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACC...CCGGGGCCGTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGTCGGGGGCCGGTGGGTaGGCTGCGCGGACGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQSGAGG*AARTRR
Trigger: CCTCCTCGTCCGCGCAGCTCACCCACCGGCCCCCGA...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCAAGAGGGAGGCCGGGTaGGAGAGCTCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: CREAAEEAACVAHPWADPKREAG*ESSCPG
Trigger: CCCTGGGCAGGAGCTCTCCCACCCGGCCTCCCTCTT...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCCCCTGCCTTCTAGGTTaGGCCCCAGCCTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: CREAAEEAACVAHPWADPPCLLG*APAWRR
Trigger: GCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGG...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
71% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACGGCCCCGGAGGCCGAGGGACCGGTaGAGGCGGTGGTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ARGEQVPDRRGGQRPRPRRPRDR*RRWFLW
Trigger: CCAAAGGAACCACCGCCTCCACCGGTCCCTCGGCCT...CCGGGGCCGTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp CGGGCGGCCTCAGGGGGCCGGACCCAGGCAGGAAAGGTCAGAGGACTGCGGTGCTCCCAGGGAGAAGCCTaGCTGTCCCTTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: RAASGGRTQAGKVRGLRCSQGEA*LSLPGS
Trigger: AGAGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGA...GCACCGCAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR GCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCGGCTGCCGAAGAAGCTaGCTGTGTCGCCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: CREAAEEAACVAHPWADPGCRRS*LCRPPL
Trigger: CAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCC...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCCGGCCCCAGTCGTGGTaGCAGCTCAGGGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: CREAAEEAACVAHPWADPRPQSW*QLRVRA
Trigger: AGCACGAACCCTGAGCTGCCACCACGACTGGGGCCG...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp GGAGTCCGGGCGGCCTCAGGGGGCCGGACCCAGGCAGGAAAGGTCAGAGGACTGGGGTTGGCTGCAGCGTaGACGGCACCAGTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: GVRAASGGRTQAGKVRGLGLAAA*TAPVAV
Trigger: CACTGCGACTGGTGCCGTCCACGCTGCAGCCAACCC...CAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCGGACTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp CGGGCGGCCTCAGGGGGCCGGACCCAGGCAGGAAAGGTCAGAGGACTGCGGTGCAGGCGCCTGCTGCTTTaGGAAGGCTGGGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RAASGGRTQAGKVRGLRCRRLLL*EGWGCC
Trigger: GCAGCAACCCCAGCCTTCCCAAAGCAGCAGGCGCCT...GCACCGCAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTTCGCAGGCGCGGCGCTaGCGGCTGCACAGTGACGAG +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALSQARR*RLHSDE
Trigger: CTCGTCACTGTGCAGCCGCCAGCGCCGCGCCTGCGA...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CCA 90 bp GCTGGGGCTCAGGAAGGGTCCGTGGGCCCCGGGAGCTGCCGTGAAAGGGTTGGCCCATTGAAGGCGCCGTaGGGGCCCGAGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: AGAQEGSVGPGSCRERVGPLKAP*GPEALL
Trigger: CAGCAAAGCCTCGGGCCCCCACGGCGCCTTCAATGG...GCCAACCCTTTCACGGCAGCTCCCGGGGCCCACGGACCCTTCCTGAGCCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGAGGCCGCTCCTTGTCTaGGCCTGGAGTCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQRPLLV*AWSPGG
Trigger: GCCGCCCGGACTCCAGGCTCAGACAAGGAGCGGCCT...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp CTTGCCAGGCGTGGGGGTGCTGCCAACCAGGTTGGCTCCAGGAAGCCAGCACAGAGGCCGCTCCTTGTCTaGGCCTGGAGTCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LARRGGAANQVGSRKPAQRPLLV*AWSPGG
Trigger: GCCGCCCGGACTCCAGGCTCAGACAAGGAGCGGCCT...CTGTGCTGGCTTCCTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTGGCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCCCAAAGCCCCGGATGTaGGGCAACGGTGACGGGTAC +
Preference number: 4 (lower is better)
Translates to: CREAAEEAACVAHPWADPPKPRM*GNGDGY
Trigger: GTACCCGTCACCGTTGCCTCACATCCGGGGCTTTGG...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR TCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGCGCCTCCGGTCGCCATaGAAGGCGCGAGGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQRLRSP*KARGGA
Trigger: CGCCCCGCCTCGCGCCTTTCATGGCGACCGGAGGCG...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR GCA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTGGGTGGGAGAGCTCCTaGCCAGGGGGCAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPGWESS*PGGRAP
Trigger: TGGGGCCCTGCCCCCTGGGCAGGAGCTCTCCCACCC...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCGAAAGGTCAGAGGACTaGGGTGCAGGCGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: CREAAEEAACVAHPWADPERSED*GAGGPM
Trigger: CATGGGGCCGCCTGCACCGCAGTCCTCTGACCTTTC...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CGGGCGGCCTCAGGGGGCCGGACCCAGGCAGGAAAGGTCAGAGGACTGCGGTGCCTCCAAAGGCCCCGTTaGAGAGGGCAGCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RAASGGRTQAGKVRGLRCLQRPR*RGQPKR
Trigger: CCTCTTTGGCTGCCCTCTCCAACGGGGCCTTTGGAG...GCACCGCAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGTGCAGGCGGCCCCATaGGTCCGGTGGGGAGGCGAA +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQVQAAP*VRWGGE
Trigger: TTCGCCTCCCCACCGGACCCATGGGGCCGCCTGCAC...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTGGCCGCAGCAGGTGGTaGTGGAGGAGCCAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALGRSRW*WRSQAA
Trigger: AGCCGCTTGGCTCCTCCACCACCACCTGCTGCGGCC...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACGGCCCCGGCTGAGCCTTTGGGGGTaGGGGCAGAGTGAACGGGAA +
Preference number: 4 (lower is better)
Translates to: ARGEQVPDRRGGQRPRPRLSLWG*GQSERE
Trigger: TTCCCGTTCACTCTGCCCCCACCCCCAAAGGCTCAG...CCGGGGCCGTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTCCCTGCCTTCTAGGTTaGGCCCCAGCCTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALPCLLG*APAWRR
Trigger: GCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGG...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTCCGGTGGGGTCTTGCTaGGAAGGTGAGGGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALPVGSC*EGEGFP
Trigger: CGGGAACCCCTCACCTTCTCAGCAAGACCCCACCGG...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCGACTTGGGTGGTAGGTaGACGGGAGGGGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: CREAAEEAACVAHPWADPDLGGR*TGGGTL
Trigger: CAAAGTGCCCCCTCCCGTTCACCTACCACCCAAGTC...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTCTTCACAGTTCCCATTaGAGGCGCCGTGGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALLHSSH*RRRGGP
Trigger: CGGGCCCCCACGGCGCCTTCAATGGGAACTGTGAAG...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGTCAGAGGACTGCGGTaGAGGCGGCCCCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQVRGLR*RRPHGS
Trigger: GGACCCATGGGGCCGCCTGCACCGCAGTCCTCTGAC...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACGAAGCGGGGTGGCCTTaGCAGGCGTGGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHEAGWP*QAWGCC
Trigger: GCAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTC...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGTGCTGGCCCCGAGCTTaGCCCAAGGCCACGGCCCGG +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQCWPRA*PKATAR
Trigger: CCGGGCCGTGGCCTTGGGGCAAGCTCGGGGCCAGCA...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGCTCAGGAAGGGTCCGTaGGCCCCGGGAGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRLRKGP*APGAAV
Trigger: CACGGCAGCTCCCGGGGCCCACGGACCCTTCCTGAG...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCTCAGGAAGGGTCCGTaGGCCCCGGGAGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPLRKGP*APGAAV
Trigger: CACGGCAGCTCCCGGGGCCCACGGACCCTTCCTGAG...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCCTCAGGAAGGGTCCGTaGGCCCCGGGAGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: LLLWEGWGCCREAAEEAALRKGP*APGAAV
Trigger: CACGGCAGCTCCCGGGGCCCACGGACCCTTCCTGAG...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGTGCAGGCGGCCCCATaGGTCCGGTGGGGAGGCGAA +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWVQAAP*VRWGGE
Trigger: TTCGCCTCCCCACCGGACCCATGGGGCCGCCTGCAC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGCCCGGGGGCTGTTCTTaGCTCCGCTCCAGGCCCGAC +
Preference number: 4 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRPGGCS*LRSRPD
Trigger: GTCGGGCCTGGAGCGGAGCCAAGAACAGCCCCCGGG...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
3UTR CAA 72 bp AAGGGTCCGTGGGCCCCGGGAGCTGCCGTGAAAGGGTaGGCTGCAGCGTGGACGGCACCAGTCGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: KGPWAPGAAVKG*AAAWTAPVAVK
Trigger: CTTCACTGCGACTGGTGCCGTCCACGCTGCAGCCAACCCTTTCACGGCAGCTCCCGGGGCCCACGGACCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CAA 72 bp TTGGTTGGCCGAGGCCCCTCCTCACCAGCCCGGGCCTaGGGAGTAGCAGGAGAAACTCGGAGCTGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: LVGRGPSSPARA*GVAGETRSWGR
Trigger: ACGGCCCCAGCTCCGAGTTTCTCCTGCTACTCCCAAGGCCCGGGCTGGTGAGGAGGGGCCTCGGCCAACCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTTCGGAGCTGGGGCCGTaGGAAGGGGAGGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPSELGP*EGEVPV
Trigger: GACAGGGACCTCCCCTTCTCACGGCCCCAGCTCCGA...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGTCGGAGCTGGGGCCGTaGGAAGGGGAGGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRSELGP*EGEVPV
Trigger: GACAGGGACCTCCCCTTCTCACGGCCCCAGCTCCGA...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGTCTTGCTGAGAAGGTaGGGGGTTCCCGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQVLLRR*GVPGAA
Trigger: TGCGGCCCCGGGAACCCCTCACCTTCTCAGCAAGAC...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTCCATGGCCCCCGAGATaGGCCACACTCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALPWPPR*ATLPCT
Trigger: TGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGG...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp CGCACAGATTCCTTGGTTGGCCGAGGCCCCTCCTCACCAGCCCGGGCCTTGGGACCATGGCCCCCGAGATaGGCCACACTCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: RTDSLVGRGPSSPARALGPWPPR*ATLPCT
Trigger: TGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGG...TCCCAAGGCCCGGGCTGGTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGCTGGCGGCTGCACAGTaGCGAGAGGGCCACGGCTTC +
Preference number: 4 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRLAAAQ*REGHGF
Trigger: GAAGCCGTGGCCCTCTCGTCACTGTGCAGCCGCCAG...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR TCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGCGGAGGCCGAAGGGTaGGACCCGAAGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWAEAEG*DPKLQL
Trigger: CAGCTGCAGCTTCGGGTCTCACCCTTCGGCCTCCGC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GGAGCTGCCGTGAAAGGGTTGGCTGCAGCGTGGACGGCACCAGTCGCAGTGAAGGCGGAGGCCGAAGGGTaGGACCCGAAGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GAAVKGLAAAWTAPVAVKAEAEG*DPKLQL
Trigger: CAGCTGCAGCTTCGGGTCTCACCCTTCGGCCTCCGC...CTTCACTGCGACTGGTGCCGTCCACGCTGCAGCCAACCCTTTCACGGCAGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR GCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGGGTGGGAGAGCTCCTaGCCAGGGGGCAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQGWESS*PGGRAP
Trigger: TGGGGCCCTGCCCCCTGGGCAGGAGCTCTCCCACCC...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTGTGGGCCCCGGGAGCTaGCGTGAAAGGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAVGPGS*RERVGC
Trigger: GCAGCCAACCCTTTCACGGCAGCTCCCGGGGCCCAC...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp CGGCGGCGGCAGCCTCCTCCTTCCGCTCTTCCTTTACCCGCACAGATTCCTTGGGTGGGCCCCGGGAGCTaGCGTGAAAGGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RRRQPPPSALPLPAQIPWVGPGS*RERVGC
Trigger: GCAGCCAACCCTTTCACGGCAGCTCCCGGGGCCCAC...CCAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAGGAGGAGGCTGCCGCCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR GCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGCAGGCGTGGGGGTGCTaGCAACCAGGTTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQQAWGC*QPGWLQ
Trigger: CTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTG...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGCAGCCTGGAGGCGCCTaGTGCTTTGGGAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQQPGGA*CFGKAG
Trigger: CCCAGCCTTCCCAAAGCAGCAGGCGCCTCCAGGCTG...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTGCGGTGGCCACCCCCTaGCAGGGGTCGATGCAAGTC +
Preference number: 4 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAAVATP*QGSMQV
Trigger: GACTTGCATCGACCCCTGGCAGGGGGTGGCCACCGC...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTGGAGGCGAAGGCTGGTaGGGCCCCTGGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALGGEGW*GPWAFF
Trigger: AAAGAAAGCCCAGGGGCCCCACCAGCCTTCGCCTCC...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACGGCCGCAGCAGGTGGTaGTGGAGGAGCCAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHGRSRW*WRSQAA
Trigger: AGCCGCTTGGCTCCTCCACCACCACCTGCTGCGGCC...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTGGCTTAGTGAGCCCTTaGGGAGGCAGGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPGLVSP*GGRPRA
Trigger: GGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCC...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCTGGCCACCCTTAGCCTaGGGCAGGGTTTTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: CREAAEEAACVAHPWADPWPPLA*GRVLEN
Trigger: GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGGGTTGGGCCCCAGCCTaGAGGCGCCTGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRGWAPA*RRLLLW
Trigger: CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACC...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGGTTGGGCCCCAGCCTaGAGGCGCCTGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWGWAPA*RRLLLW
Trigger: CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCCCTGCCTTCTAGGTTaGGCCCCAGCCTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPPCLLG*APAWRR
Trigger: GCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGG...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGGGCGGCCTAGTGCGGTaGCCACCCCCTGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRGGLVR*PPPARG
Trigger: ACCCCTGGCAGGGGGTGGCCACCGCACTAGGCCGCC...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGGTGGGGGTGGCAGACTaGGAGTGGCCGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQVGVAD*EWPAGV
Trigger: CACCCCTGCCGGCCACTCCCAGTCTGCCACCCCCAC...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GCTGGGGCTCAGGAAGGGTCCGTGGGCCCCGGGAGCTGCCGTGAAAGGGTTGGCGGCACACCACTTCCCTaGTTTCTGCCAGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AGAQEGSVGPGSCRERVGGTPLP*FLPVLR
Trigger: CCTCAGCACTGGCAGAAACCAGGGAAGTGGTGTGCC...GCCAACCCTTTCACGGCAGCTCCCGGGGCCCACGGACCCTTCCTGAGCCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTGACTTGGGTGGTAGGTaGACGGGAGGGGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALDLGGR*TGGGTL
Trigger: CAAAGTGCCCCCTCCCGTTCACCTACCACCCAAGTC...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTGGCTGGAAGGCCCCCTaGAGGGAGCCAAAGGAGACG +
Preference number: 4 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAGWKAP*REPKET
Trigger: CGTCTCCTTTGGCTCCCTGCAGGGGGCCTTCCAGCC...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR GCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACCAGGCGTGGGGGTGCTaGCAACCAGGTTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHQAWGC*QPGWLQ
Trigger: CTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTG...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACTGCCAGGCGTGGGGGTaGTGCCAACCAGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHCQAWG*CQPGWL
Trigger: GAGCCAACCTGGTTGGCAGCACCCCCACGCCTGGCA...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGCACAAGCGGAGGTGGTaGCCCCAAAAGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWHKRRW*PQKGSR
Trigger: CCGGGAGCCCTTTTGGGGGCACCACCTCCGCTTGTG...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGGCTGCCGAAGAAGCTaGCTGTGTCGCCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWGCRRS*LCRPPL
Trigger: CAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTGGCTGCCGAAGAAGCTaGCTGTGTCGCCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAGCRRS*LCRPPL
Trigger: CAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCC...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGCCTGGAGGCGCCTGCTaGTTTGGGAAGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQPGGAC*FGKAGV
Trigger: AACCCCAGCCTTCCCAAAGCAGCAGGCGCCTCCAGG...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTCCTGCCAGGGGTCGATaGAAGTCTCCCCGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALPARGR*KSPRGR
Trigger: TCTTCCTCGGGGAGACTTGCATCGACCCCTGGCAGG...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR GCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCTGCCATATGGAGAAGTaGGGAGGCCGAAGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: CREAAEEAACVAHPWADPCHMEK*GGRRVR
Trigger: TCTCACCCTTCGGCCTCCGCACTTCTCCATATGGCA...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTTTGTGCTGGTGGAACTaGAAGGCCAGGGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ISCWPHLPREKPDCPFPALCWWN*KARGRA
Trigger: GGCCCGGCCCCTGGCCTTCCAGTTCCACCAGCACAA...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGATCTGTGTCCCCTTCTaGGAGAGCCCGCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQICVPF*ESPLGT
Trigger: GGTGCCGAGCGGGCTCTCCCAGAAGGGGACACAGAT...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCGGGTTGGCTGCAGCGTaGACGGCACCAGTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLLWEGWGCCREAAEEAAGLAAA*TAPVAV
Trigger: CACTGCGACTGGTGCCGTCCACGCTGCAGCCAACCC...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTGGCTGGTGGGGCCCCTaGGCTTTCTTTCTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALGWWGP*AFFLGK
Trigger: TTTGCCCAGAAAGAAAGCCCAGGGGCCCCACCAGCC...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGTGGCCTTGCCAGGCGTaGGGGTGCTGCCAACCAGGT +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWWPCQA*GCCQPG
Trigger: ACCTGGTTGGCAGCACCCCCACGCCTGGCAAGGCCA...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACCTCATAGAAGCGGGGTaGCCTTGCCAGGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHLIEAG*PCQAWG
Trigger: CCCCCACGCCTGGCAAGGCCACCCCGCTTCTATGAG...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTGGGCACAAGCGGAGGTaGTGCCCCCAAAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPGHKRR*CPQKGS
Trigger: GGAGCCCTTTTGGGGGCACCACCTCCGCTTGTGCCC...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CGGGCGGCCTCAGGGGGCCGGACCCAGGCAGGAAAGGTCAGAGGACTGCGGTGCCTCAGCCCTAGGACCTaGTTAAAGGAAGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RAASGGRTQAGKVRGLRCLSPRT*LKEGEM
Trigger: CATCTCCCCTTCCTTTAACCAGGTCCTAGGGCTGAG...GCACCGCAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGGTCCTGCCCCCTGTTaGTCATCTCCTGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWGPAPC*SSPAGP
Trigger: GGGGCCAGCAGGAGATGACCAACAGGGGGCAGGACC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACGGTCCTGCCCCCTGTTaGTCATCTCCTGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHGPAPC*SSPAGP
Trigger: GGGGCCAGCAGGAGATGACCAACAGGGGGCAGGACC...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGTGTGTCGCCCACCCCTaGGCCGACCCCCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRCVAHP*ADPLLW
Trigger: CCAAAGAAGGGGGTCGGCCCAGGGGTGGGCGACACA...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGAGGCCGAGGGACCGGTaGAGGCGGTGGTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRRPRDR*RRWFLW
Trigger: CCAAAGGAACCACCGCCTCCACCGGTCCCTCGGCCT...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
3UTR CAA 72 bp CCTTCCGCTCTTCCTTTACCCGCACAGATTCCTTGGTaGGCCGAGGCCCCTCCTCACCAGCCCGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PSALPLPAQIPW*AEAPPHQPGPW
Trigger: CCAAGGCCCGGGCTGGTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CAA 72 bp TCCTCCTTCCGCTCTTCCTTTACCCGCACAGATTCCTaGGTTGGCCGAGGCCCCTCCTCACCAGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SSFRSSFTRTDS*VGRGPSSPARA
Trigger: GGCCCGGGCTGGTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAGGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CAA 72 bp TTAGCTCCTCACCCGCCTCATAGAAGCGGGGTGGCCTaGCCAGGCGTGGGGGTGCTGCCAACCAGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LAPHPPHRSGVA*PGVGVLPTRLA
Trigger: AGCCAACCTGGTTGGCAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTCTATGAGGCGGGTGAGGAGCTAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTAAGGGCGTTAGCGGCTaGGGCCCCAGGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVKGVSG*GPRVPW
Trigger: CCAGGGCACCCTGGGGCCTCAGCCGCTAACGCCCTT...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR TCA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCCGGGGGATAAGGGGTaGAGTGCTGGTGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPPGDKG*SAGGCA
Trigger: AGCACACCCACCAGCACTTCACCCCTTATCCCCCGG...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR TCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTTGGCTGGTGAGGTTATaGCCTTTGCCCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALWLVRL*PLPSSP
Trigger: AGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCA...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGAAAGGTCAGAGGACTaGGGTGCAGGCGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWERSED*GAGGPM
Trigger: CATGGGGCCGCCTGCACCGCAGTCCTCTGACCTTTC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGCACAAGCGGAGGTGGTaGCCCCAAAAGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQHKRRW*PQKGSR
Trigger: CCGGGAGCCCTTTTGGGGGCACCACCTCCGCTTGTG...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAAGGCTGGGGTTGCTaGCGTGAGGCTGCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQEGWGC*REAAEE
Trigger: TTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTC...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACTGGGAAGGCTGGGGTTaGTGCCGTGAGGCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHWEGWG*CREAAE
Trigger: TTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCA...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGCCTGGAGGCGCCTGCTaGTTTGGGAAGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWPGGAC*FGKAGV
Trigger: AACCCCAGCCTTCCCAAAGCAGCAGGCGCCTCCAGG...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGCAGCCTGGAGGCGCCTaGTGCTTTGGGAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQQPGGA*CFGKAG
Trigger: CCCAGCCTTCCCAAAGCAGCAGGCGCCTCCAGGCTG...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCCGCGGCGCTGGCGGCTaGACAGTGACGAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSRGAGG*TVTRGP
Trigger: TGGCCCTCTCGTCACTGTGCAGCCGCCAGCGCCGCG...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTCGAGAGTTCAGGTCCTaGCCGATCAGGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALREFRS*PIRSCS
Trigger: TGAGCAGGACCTGATCGGCCAGGACCTGAACTCTCG...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTTGCTGGTGGTTGTGCTaGTGGAACTGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALCWWLC*WNWKAR
Trigger: CCTGGCCTTCCAGTTCCACCAGCACAACCACCAGCA...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTGTGTGCTGGTGCTGGTaGTTGTGCTGGTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALVCWCW*LCWWNW
Trigger: CCAGTTCCACCAGCACAACCACCAGCACCAGCACAC...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACATCTGTGTCCCCTTCTaGGAGAGCCCGCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHICVPF*ESPLGT
Trigger: GGTGCCGAGCGGGCTCTCCCAGAAGGGGACACAGAT...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCTGGTTTCCTCAAAGGTaGCCGGAAATGGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: CREAAEEAACVAHPWADPWFPQR*PEMVGD
Trigger: ATCCCCGACCATTTCCGGCCACCTTTGAGGAAACCA...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp CGCACAGATTCCTTGGTTGGCCGAGGCCCCTCCTCACCAGCCCGGGCCTTGGGAGATCAATGTGGGTGCTaGGGCTCAGGAAGGGTCCGT +
Preference number: 4 (lower is better)
Translates to: RTDSLVGRGPSSPARALGDQCGC*GSGRVR
Trigger: ACGGACCCTTCCTGAGCCCCAGCACCCACATTGATC...TCCCAAGGCCCGGGCTGGTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp CTTGCCAGGCGTGGGGGTGCTGCCAACCAGGTTGGCTCCAGGAAGCCAGCACAGCCTGGGCTTTCTTTCTaGGCAAAGACGGCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LARRGGAANQVGSRKPAQPGLSF*AKTAPE
Trigger: CTCCGGCGCCGTCTTTGCCCAGAAAGAAAGCCCAGG...CTGTGCTGGCTTCCTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTGGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACGGAGGCGAAGGCTGGTaGGGCCCCTGGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHGGEGW*GPWAFF
Trigger: AAAGAAAGCCCAGGGGCCCCACCAGCCTTCGCCTCC...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACGGAGAAACTCGGAGCTaGGGCCGTGAGAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHGETRS*GREKGR
Trigger: CCTCCCCTTCTCACGGCCCCAGCTCCGAGTTTCTCC...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTGGAGAAACTCGGAGCTaGGGCCGTGAGAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAGETRS*GREKGR
Trigger: CCTCCCCTTCTCACGGCCCCAGCTCCGAGTTTCTCC...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGCCCGCACAGATTCCTTaGTTGGCCGAGGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRPAQIP*LAEAPP
Trigger: AGGAGGGGCCTCGGCCAACCAAGGAATCTGTGCGGG...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCCCGCACAGATTCCTTaGTTGGCCGAGGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPPAQIP*LAEAPP
Trigger: AGGAGGGGCCTCGGCCAACCAAGGAATCTGTGCGGG...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GCTGTAGAGCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACGCCAGCACAGCGATCTaGTGGGCTAGGGCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: AVEQGVSRFQTVEAGSGHASTAI*WARAQK
Trigger: TTTCTGGGCCCTAGCCCACCAGATCGCTGTGCTGGC...GTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGCTCTACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCTTTGCCCTCCAGCCCTaGCTTAAAACCTCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: CREAAEEAACVAHPWADPFALQP*LKTSAL
Trigger: TAGGGCTGAGGTTTTAAGCCAGGGCTGGAGGGCAAA...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGGGCACTTTGGCCTCTaGCTTAGTGAGCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQGHFGL*LSEPLG
Trigger: CCCCAAGGGCTCACTAAGCCAGAGGCCAAAGTGCCC...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCAGGCGCCTGCTGCTTTaGGAAGGCTGGGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLWEGWGCCREAAEEAARRLLL*EGWGCC
Trigger: GCAGCAACCCCAGCCTTCCCAAAGCAGCAGGCGCCT...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTCGTCTCTGTCCGACTTaGGCCTTAGGGGATCCGGAA +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALRLCPT*ALGDPE
Trigger: TTCCGGATCCCCTAAGGCCCAAGTCGGACAGAGACG...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGGAGGGGGAAAGCTGTaGGTGGACAAAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWGGGKL*VDKGRG
Trigger: GCCCCTGCCTTTGTCCACCCACAGCTTTCCCCCTCC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR TCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACCGGCACCAGTCGCAGTaGAGAGGGAGGCCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENRHQSQ*RGRPGG
Trigger: CCCACCCGGCCTCCCTCTTCACTGCGACTGGTGCCG...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGCCTTCTCCTCCTTGGTaGTGGAGGGCTCCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQPSPPW*WRAPSA
Trigger: AGCGGAGGGAGCCCTCCATCACCAAGGAGGAGAAGG...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCTCGGAGCTGGGGCCGTaGGAAGGGGAGGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSSELGP*EGEVPV
Trigger: GACAGGGACCTCCCCTTCTCACGGCCCCAGCTCCGA...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp AGGCGAAGCTTGTGGGACGCCCAAAGGGATCAATGTGGGTGCTGGGGCTCAGGAGTCTTGCTGAGAAGGTaGGGGGTTCCCGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RRSLWDAQRDQCGCWGSGVLLRR*GVPGAA
Trigger: TGCGGCCCCGGGAACCCCTCACCTTCTCAGCAAGAC...TCCTGAGCCCCAGCACCCACATTGATCCCTTTGGGCGTCCCACAAGCTTCGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGGGGGTGGGGGCAGAGTaGACGGGAACATGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRGVGAE*TGTCWG
Trigger: CCCCCAACATGTTCCCGTTCACTCTGCCCCCACCCC...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGGGGTGGGGGCAGAGTaGACGGGAACATGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQGVGAE*TGTCWG
Trigger: CCCCCAACATGTTCCCGTTCACTCTGCCCCCACCCC...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACCTGAGATTTAGAGGCTaGGCCTTTGGGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHLRFRG*AFGGGG
Trigger: GCCCCCACCCCCAAAGGCTCAGCCTCTAAATCTCAG...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACGGCCCCGGAGGGTTTTGTTAGATTaGCCCCTGCCTTCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: ARGEQVPDRRGGQRPRPRRVLLD*PLPSRL
Trigger: CAACCTAGAAGGCAGGGGTCAATCTAACAAAACCCT...CCGGGGCCGTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR GCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGGCTGGAAGGCCCCCTaGAGGGAGCCAAAGGAGACG +
Preference number: 4 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQGWKAP*REPKET
Trigger: CGTCTCCTTTGGCTCCCTGCAGGGGGCCTTCCAGCC...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR GCA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCGTGAAAGGGTTGGCTaGAGCGTGGACGGCACCAGT +
Preference number: 4 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPRERVG*SVDGTS
Trigger: ACTGGTGCCGTCCACGCTGCAGCCAACCCTTTCACG...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTGTCAGAGGACTGCGGTaGAGGCGGCCCCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVVRGLR*RRPHGS
Trigger: GGACCCATGGGGCCGCCTGCACCGCAGTCCTCTGAC...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGCTGTTGGTCATCTCCTaGTGGCCCCACCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWLLVIS*WPHLPR
Trigger: CCTGGGAAGGTGGGGCCAGCAGGAGATGACCAACAG...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTGAAGGCTGGGGTTGCTaGCGTGAGGCTGCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAEGWGC*REAAEE
Trigger: TTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTC...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GGAGTCCGGGCGGCCTCAGGGGGCCGGACCCAGGCAGGAAAGGTCAGAGGACTGTTCCGCTTCCCAGAATaGTTCAGCCGATGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GVRAASGGRTQAGKVRGLFRFPE*FSRCSS
Trigger: ACTGGAACATCGGCTGAAGCATTCTGGGAAGCGGAA...CAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCGGACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTTGGTGGTTGTGCTGGTaGAACTGGAAGGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAWWLCW*NWKARG
Trigger: GCCCCTGGCCTTCCAGTTCCACCAGCACAACCACCA...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGGCTGGTGGGGCCCCTaGGCTTTCTTTCTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWGWWGP*AFFLGK
Trigger: TTTGCCCAGAAAGAAAGCCCAGGGGCCCCACCAGCC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGCACAGATTCCTTGGTTaGCCGAGGCCCCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWHRFLG*PRPLLT
Trigger: GGTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTG...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCCACAGATTCCTTGGTTaGCCGAGGCCCCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: LLLWEGWGCCREAAEEAAHRFLG*PRPLLT
Trigger: GGTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTG...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTAGCACAGCGATCTGGTaGGCTAGGGCCCAGAAACGG +
Preference number: 4 (lower is better)
Translates to: ISCWPHLPREKPDCPFPASTAIW*ARAQKR
Trigger: CCGTTTCTGGGCCCTAGCCCACCAGATCGCTGTGCT...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGTGGCCTTGCCAGGCGTaGGGGTGCTGCCAACCAGGT +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRWPCQA*GCCQPG
Trigger: ACCTGGTTGGCAGCACCCCCACGCCTGGCAAGGCCA...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGTGGCCTTGCCAGGCGTaGGGGTGCTGCCAACCAGGT +
Preference number: 4 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQWPCQA*GCCQPG
Trigger: ACCTGGTTGGCAGCACCCCCACGCCTGGCAAGGCCA...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTCAGGAAGGGAACTGTTaGGAGGGGCACCCCTGTAAA +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALQEGNC*EGHPCK
Trigger: TTTACAGGGGTGCCCCTCCCAACAGTTCCCTTCCTG...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTTTGGTCATCTCCTGCTaGCCCCACCTTCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ISCWPHLPREKPDCPFPALVISC*PHLPRE
Trigger: CTCCCTGGGAAGGTGGGGCCAGCAGGAGATGACCAA...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACCATGGTGACCTTCTCTaGCCACCCTTAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHHGDLL*PPLAWG
Trigger: GCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATG...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCATGGTGACCTTCTCTaGCCACCCTTAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPHGDLL*PPLAWG
Trigger: GCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATG...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCCGCTGCCGTCTCCATaGCGACCGCCCTCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAPLPSP*RPPSAP
Trigger: CGGCGCTGAGGGCGGTCGCCATGGAGACGGCAGCGG...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CCA 90 bp GGAGTCCGGGCGGCCTCAGGGGGCCGGACCCAGGCAGGAAAGGTCAGAGGACTGTTCTTCTCCGCTTATTaGGCCATTTTCGGGCCCGAT +
Preference number: 4 (lower is better)
Translates to: GVRAASGGRTQAGKVRGLFFSAY*AIFGPD
Trigger: ATCGGGCCCGAAAATGGCCCAATAAGCGGAGAAGAA...CAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCGGACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCGGGGAAAGCTGTGGGTaGACAAAGGCAGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLLWEGWGCCREAAEEAAGESCG*TKAGAV
Trigger: CACTGCCCCTGCCTTTGTCCACCCACAGCTTTCCCC...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR TCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAAAAGGGCGTTAGCGGCTaGGGCCCCAGGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKKGVSG*GPRVPW
Trigger: CCAGGGCACCCTGGGGCCTCAGCCGCTAACGCCCTT...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR TCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGCCGGGGGATAAGGGGTaGAGTGCTGGTGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRPGDKG*SAGGCA
Trigger: AGCACACCCACCAGCACTTCACCCCTTATCCCCCGG...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR TCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACCCCCGGGAGCTGCCGTaGAAGGGTTGGCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENPRELP*KGWLQR
Trigger: ACGCTGCAGCCAACCCTTTCACGGCAGCTCCCGGGG...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGCCTTCTCCTCCTTGGTaGTGGAGGGCTCCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRPSPPW*WRAPSA
Trigger: AGCGGAGGGAGCCCTCCATCACCAAGGAGGAGAAGG...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGGACTTGGGTGGTAGGTaGACGGGAGGGGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQDLGGR*TGGGTL
Trigger: CAAAGTGCCCCCTCCCGTTCACCTACCACCCAAGTC...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCGGGGTGGGGGCAGAGTaGACGGGAACATGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSGVGAE*TGTCWG
Trigger: CCCCCAACATGTTCCCGTTCACTCTGCCCCCACCCC...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCCTGGGGTTGCTGCCGTaGGGCTGCCGAAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSLGLLP*GCRRSC
Trigger: GCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAG...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGGATGTGAGGCAACGGTaGCGGGTACAGCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQDVRQR*RVQLPC
Trigger: ACAGGGGAGCTGTACCCGTCACCGTTGCCTCACATC...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR TCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCCTTCACAGTTCCCATTaGAGGCGCCGTGGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSLHSSH*RRRGGP
Trigger: CGGGCCCCCACGGCGCCTTCAATGGGAACTGTGAAG...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGAGGGATCAATGTGGGTaGTGGGGCTCAGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWRDQCG*WGSGRV
Trigger: GACCCTTCCTGAGCCCCAGCACCCACATTGATCCCT...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCTGCCAGGCGTGGGGGTaGTGCCAACCAGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSCQAWG*CQPGWL
Trigger: GAGCCAACCTGGTTGGCAGCACCCCCACGCCTGGCA...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAAGAAGCGGGGTGGCCTTaGCAGGCGTGGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKEAGWP*QAWGCC
Trigger: GCAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTC...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTCACAAGCGGAGGTGGTaGCCCCAAAAGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVHKRRW*PQKGSR
Trigger: CCGGGAGCCCTTTTGGGGGCACCACCTCCGCTTGTG...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGTGGGAAGGCTGGGGTTaGTGCCGTGAGGCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQWEGWG*CREAAE
Trigger: TTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCA...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp AGGCGAAGCTTGTGGGACGCCCAAAGGGATCAATGTGGGTGCTGGGGCTCAGGACCTGGAGGCGCCTGCTaGTTTGGGAAGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: RRSLWDAQRDQCGCWGSGPGGAC*FGKAGV
Trigger: AACCCCAGCCTTCCCAAAGCAGCAGGCGCCTCCAGG...TCCTGAGCCCCAGCACCCACATTGATCCCTTTGGGCGTCCCACAAGCTTCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR GCA 90 bp GCTGTAGAGCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACTGGGGGCTGAAGAGATaGATCCTTCTGCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AVEQGVSRFQTVEAGSGHWGLKR*ILLQGL
Trigger: GAGGCCTTGCAGAAGGATGCATCTCTTCAGCCCCCA...GTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGCTCTACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR GCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGTGCCATATGGAGAAGTaGGGAGGCCGAAGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQCHMEK*GGRRVR
Trigger: TCTCACCCTTCGGCCTCCGCACTTCTCCATATGGCA...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACGTGTGCTGGTGCTGGTaGTTGTGCTGGTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHVCWCW*LCWWNW
Trigger: CCAGTTCCACCAGCACAACCACCAGCACCAGCACAC...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACTGGGTGTGCTGGTGCTaGTGGTTGTGCTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHWVCWC*WLCWWN
Trigger: GTTCCACCAGCACAACCACCAGCACCAGCACACCCA...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGTGCTGGTGGGTGTGCTaGTGCTGGTGGTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQCWWVC*CWWLCW
Trigger: CCAGCACAACCACCAGCACCAGCACACCCACCAGCA...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGCAGGGTTCGTGCTCTTaGGCTGGAAGGCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRQGSCS*AGRPPA
Trigger: TGCAGGGGGCCTTCCAGCCCAAGAGCACGAACCCTG...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTAAAGGTGGCCGGAAATaGTCGGGGATCTGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAKGGRK*SGICVP
Trigger: GGGGACACAGATCCCCGACCATTTCCGGCCACCTTT...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGGATCAATGTGGGTGCTaGGGCTCAGGAAGGGTCCGT +
Preference number: 4 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRDQCGC*GSGRVR
Trigger: ACGGACCCTTCCTGAGCCCCAGCACCCACATTGATC...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGGAGGCGAAGGCTGGTaGGGCCCCTGGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQGGEGW*GPWAFF
Trigger: AAAGAAAGCCCAGGGGCCCCACCAGCCTTCGCCTCC...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCGCCCCATGGGTCCGGTaGGGAGGCGAAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAAPWVR*GGEGWW
Trigger: CCACCAGCCTTCGCCTCCCCACCGGACCCATGGGGC...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGGTGCAGGCGGCCCCATaGGTCCGGTGGGGAGGCGAA +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEVQAAP*VRWGGE
Trigger: TTCGCCTCCCCACCGGACCCATGGGGCCGCCTGCAC...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTTGCTGCCAACCAGGTTaGCTCCAGGAAGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: ISCWPHLPREKPDCPFPACCQPG*LQEAST
Trigger: TGTGCTGGCTTCCTGGAGCCAACCTGGTTGGCAGCA...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACGGCCGCAGCAGGTGGTaGTGGAGGAGCCAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENGRSRW*WRSQAA
Trigger: AGCCGCTTGGCTCCTCCACCACCACCTGCTGCGGCC...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCGGGCACAAGCGGAGGTaGTGCCCCCAAAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSGHKRR*CPQKGS
Trigger: GGAGCCCTTTTGGGGGCACCACCTCCGCTTGTGCCC...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACGGCTTAGTGAGCCCTTaGGGAGGCAGGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENGLVSP*GGRPRA
Trigger: GGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCC...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGAGGGCATGAGGACTTaGGTGGTAGGTGAACGGGAG +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWEGMRT*VVGERE
Trigger: CTCCCGTTCACCTACCACCCAAGTCCTCATGCCCTC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGCCTGGGGCAGGGTTTTaGAGAACAGGGTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQPGAGF*RTGFRE
Trigger: TTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGG...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCTGGCCACCCTTAGCCTaGGGCAGGGTTTTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: LLLWEGWGCCREAAEEAAWPPLA*GRVLEN
Trigger: GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGAGGCGCCTGCTGCTTTaGGAAGGCTGGGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQRRLLL*EGWGCC
Trigger: GCAGCAACCCCAGCCTTCCCAAAGCAGCAGGCGCCT...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACATCCGGAACGGCCGATaGGCAGCGGGGGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENIRNGR*AAGELQ
Trigger: CTGGAGCTCCCCCGCTGCCCATCGGCCGTTCCGGAT...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCCCGGGGGCTGTTCTTaGCTCCGCTCCAGGCCCGAC +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAPGGCS*LRSRPD
Trigger: GTCGGGCCTGGAGCGGAGCCAAGAACAGCCCCCGGG...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCGTGGGGGTGGCAGACTaGGAGTGGCCGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAVGVAD*EWPAGV
Trigger: CACCCCTGCCGGCCACTCCCAGTCTGCCACCCCCAC...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
3UTR CAA 72 bp AGGCCCCGTTGGAGAGGGCAGCCAAAGAGGCGAAGCTaGTGGGACGCCCAAAGGGATCAATGTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RPRWRGQPKRRS*WDAQRDQCGCW
Trigger: CCAGCACCCACATTGATCCCTTTGGGCGTCCCACAAGCTTCGCCTCTTTGGCTGCCCTCTCCAACGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAACCCCGGGAGCTGCCGTaGAAGGGTTGGCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKPRELP*KGWLQR
Trigger: ACGCTGCAGCCAACCCTTTCACGGCAGCTCCCGGGG...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACTGGTCTTGTGGGGGTTaGGGCTTCTGTTCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHWSCGG*GFCSQV
Trigger: AACCTGGGAACAGAAGCCTCAACCCCCACAAGACCA...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCACCCTACACTCCATGTaGTGCTTGGTCTTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLLWEGWGCCREAAEEAATLHSM*CLVLWG
Trigger: CCCCCACAAGACCAAGCATCACATGGAGTGTAGGGT...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCCCTCTGCTCTCCCAGTaGCCCTACACTCCATGTGAT +
Preference number: 4 (lower is better)
Translates to: LLLWEGWGCCREAAEEAAPLLSQ*PYTPCD
Trigger: ATCACATGGAGTGTAGGGTCACTGGGAGAGCAGAGG...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGAGAGGTGGTGGAGTCTaGGATTTAGAGGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQRGGGV*DLEAEP
Trigger: AGGCTCAGCCTCTAAATCTCAGACTCCACCACCTCT...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GGAGCTGCCGTGAAAGGGTTGGCTGCAGCGTGGACGGCACCAGTCGCAGTGAAGGTGTGTGGTACATGGTaGCCTTCTCTGGCCACCCTT +
Preference number: 4 (lower is better)
Translates to: GAAVKGLAAAWTAPVAVKVCGTW*PSLATL
Trigger: AAGGGTGGCCAGAGAAGGTCACCATGTACCACACAC...CTTCACTGCGACTGGTGCCGTCCACGCTGCAGCCAACCCTTTCACGGCAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR GCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAAGTGGGCCCCGGGAGCTaGCGTGAAAGGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKVGPGS*RERVGC
Trigger: GCAGCCAACCCTTTCACGGCAGCTCCCGGGGCCCAC...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCGTCAGAGGACTGCGGTaGAGGCGGCCCCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAVRGLR*RRPHGS
Trigger: GGACCCATGGGGCCGCCTGCACCGCAGTCCTCTGAC...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACCAGGCGTGGGGGTGCTaGCAACCAGGTTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENQAWGC*QPGWLQ
Trigger: CTGGAGCCAACCTGGTTGGCAGCACCCCCACGCCTG...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGCTGTTGGTCATCTCCTaGTGGCCCCACCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRLLVIS*WPHLPR
Trigger: CCTGGGAAGGTGGGGCCAGCAGGAGATGACCAACAG...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGGAAGGCTGGGGTTGCTaGCGTGAGGCTGCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSREGWGC*REAAEE
Trigger: TTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTC...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACCAGCCTGGAGGCGCCTaGTGCTTTGGGAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENQPGGA*CFGKAG
Trigger: CCCAGCCTTCCCAAAGCAGCAGGCGCCTCCAGGCTG...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACTATTTCTCAAACATGTaGGGGCCGTGGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHYFSNM*GPWGGS
Trigger: GCTGCCACCCCACGGCCCCCACATGTTTGAGAAATA...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTCAGGGTTCGTGCTCTTaGGCTGGAAGGCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVQGSCS*AGRPPA
Trigger: TGCAGGGGGCCTTCCAGCCCAAGAGCACGAACCCTG...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGAAAGGTGGCCGGAAATaGTCGGGGATCTGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQKGGRK*SGICVP
Trigger: GGGGACACAGATCCCCGACCATTTCCGGCCACCTTT...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGGGCACACCACTTCCCTaGTTTCCTCAAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQGTPLP*FPQRWP
Trigger: CGGCCACCTTTGAGGAAACCAGGGAAGTGGTGTGCC...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCAAGAGGGAGGCCGGGTaGGAGAGCTCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAKREAG*ESSCPG
Trigger: CCCTGGGCAGGAGCTCTCCCACCCGGCCTCCCTCTT...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACGGGTTGGCTGCAGCGTaGACGGCACCAGTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENGLAAA*TAPVAV
Trigger: CACTGCGACTGGTGCCGTCCACGCTGCAGCCAACCC...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGCTCCAAAGGCCCCGTTaGAGAGGGCAGCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRLQRPR*RGQPKR
Trigger: CCTCTTTGGCTGCCCTCTCCAACGGGGCCTTTGGAG...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGCCTGGGCTTTCTTTCTaGGCAAAGACGGCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQPGLSF*AKTAPE
Trigger: CTCCGGCGCCGTCTTTGCCCAGAAAGAAAGCCCAGG...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGGGCTGGTGGGGCCCCTaGGCTTTCTTTCTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRGWWGP*AFFLGK
Trigger: TTTGCCCAGAAAGAAAGCCCAGGGGCCCCACCAGCC...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTGGAGAAACTCGGAGCTaGGGCCGTGAGAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVGETRS*GREKGR
Trigger: CCTCCCCTTCTCACGGCCCCAGCTCCGAGTTTCTCC...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGCCAGCACAGCGATCTaGTGGGCTAGGGCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQASTAI*WARAQK
Trigger: TTTCTGGGCCCTAGCCCACCAGATCGCTGTGCTGGC...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACCTCATAGAAGCGGGGTaGCCTTGCCAGGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENLIEAG*PCQAWG
Trigger: CCCCCACGCCTGGCAAGGCCACCCCGCTTCTATGAG...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGCTCAGCCCTAGGACCTaGTTAAAGGAAGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQLSPRT*LKEGEM
Trigger: CATCTCCCCTTCCTTTAACCAGGTCCTAGGGCTGAG...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAAGGCTTAGTGAGCCCTTaGGGAGGCAGGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKGLVSP*GGRPRA
Trigger: GGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCC...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGCTGAGCCTTTGGGGGTaGGGGCAGAGTGAACGGGAA +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRLSLWG*GQSERE
Trigger: TTCCCGTTCACTCTGCCCCCACCCCCAAAGGCTCAG...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CGGCGGCGGCAGCCTCCTCCTTCCGCTCTTCCTTTACCCGCACAGATTCCTTGGCCTGGGGCAGGGTTTTaGAGAACAGGGTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RRRQPPPSALPLPAQIPWPGAGF*RTGFRE
Trigger: TTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGG...CCAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAGGAGGAGGCTGCCGCCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp AGGCGAAGCTTGTGGGACGCCCAAAGGGATCAATGTGGGTGCTGGGGCTCAGGACATGGTGACCTTCTCTaGCCACCCTTAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RRSLWDAQRDQCGCWGSGHGDLL*PPLAWG
Trigger: GCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATG...TCCTGAGCCCCAGCACCCACATTGATCCCTTTGGGCGTCCCACAAGCTTCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCCGGTGGGGTCTTGCTaGGAAGGTGAGGGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAPVGSC*EGEGFP
Trigger: CGGGAACCCCTCACCTTCTCAGCAAGACCCCACCGG...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp GAAGGCAGGGCAGGAGGTCATTCCGAAAGTCAAGCTTGTGGGAGTCACCCTTCACCGGTGGGGTCTTGCTaGGAAGGTGAGGGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: EGRAGGHSESQACGSHPSPVGSC*EGEGFP
Trigger: CGGGAACCCCTCACCTTCTCAGCAAGACCCCACCGG...TGAAGGGTGACTCCCACAAGCTTGACTTTCGGAATGACCTCCTGCCCTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGTGGTCTTGTGGGGGTTaGGGCTTCTGTTCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQWSCGG*GFCSQV
Trigger: AACCTGGGAACAGAAGCCTCAACCCCCACAAGACCA...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGTGGGGTGAAGGGGACTaGGCCATTAAGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRWGEGD*AIKRWW
Trigger: CCACCACCTCTTAATGGCTCAGTCCCCTTCACCCCA...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGCTGGGGTTGCTGCCGTaGGGCTGCCGAAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVELGLLP*GCRRSC
Trigger: GCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAG...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCTCCAGACGAAGCTaGCGACCAAGGCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFALSRRS*RPRPGG
Trigger: CCCGCCAGGCCTTGGTCGTCAGCTTCGTCTGGAGAG...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR TCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGCCAGCTTCCAGAGAGTaGCGGGAGGACGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQPASRE*REDASF
Trigger: AAAAGAGGCGTCCTCCCGTCACTCTCTGGAAGCTGG...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR GCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGTGGTGCTGGTGGTTGTaGTGGTGGAACTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRWCWWL*WWNWKA
Trigger: GGCCTTCCAGTTCCACCAGCACAACCACCAGCACCA...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR GCA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAATTTGTCAGCGTCTaGTCGGCGGCTTCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPQFVSV*SAASPL
Trigger: TAAAGGGGAAGCCGCCGAGCAGACGCTGACAAATTG...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAATTGTGCTGGTGGAACTaGAAGGCCAGGGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKLCWWN*KARGRA
Trigger: GGCCCGGCCCCTGGCCTTCCAGTTCCACCAGCACAA...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAACGGCCCCAGTCGTGGTaGCAGCTCAGGGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKRPQSW*QLRVRA
Trigger: AGCACGAACCCTGAGCTGCCACCACGACTGGGGCCG...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCACCGGCCCCAGTCGTaGTGGCAGCTCAGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAHRPQS*WQLRVR
Trigger: ACGAACCCTGAGCTGCCACCACGACTGGGGCCGGTG...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGCACCGGCCCCAGTCGTaGTGGCAGCTCAGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEHRPQS*WQLRVR
Trigger: ACGAACCCTGAGCTGCCACCACGACTGGGGCCGGTG...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCAGCACAGCGATCTGGTaGGCTAGGGCCCAGAAACGG +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSSTAIW*ARAQKR
Trigger: CCGTTTCTGGGCCCTAGCCCACCAGATCGCTGTGCT...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGCTCATAGAAGCGGGGTaGCCTTGCCAGGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVELIEAG*PCQAWG
Trigger: CCCCCACGCCTGGCAAGGCCACCCCGCTTCTATGAG...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp AGGCGAAGCTTGTGGGACGCCCAAAGGGATCAATGTGGGTGCTGGGGCTCAGGACAAAAGGGCTCCCGGTaGGGTCTTGCTGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RRSLWDAQRDQCGCWGSGQKGSR*GLAEKV
Trigger: CACCTTCTCAGCAAGACCCCACCGGGAGCCCTTTTG...TCCTGAGCCCCAGCACCCACATTGATCCCTTTGGGCGTCCCACAAGCTTCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGCTCAGCCCTAGGACCTaGTTAAAGGAAGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWLSPRT*LKEGEM
Trigger: CATCTCCCCTTCCTTTAACCAGGTCCTAGGGCTGAG...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGGAGGGCATGAGGACTTaGGTGGTAGGTGAACGGGAG +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSREGMRT*VVGERE
Trigger: CTCCCGTTCACCTACCACCCAAGTCCTCATGCCCTC...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAATGTGTCGCCCACCCCTaGGCCGACCCCCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKCVAHP*ADPLLW
Trigger: CCAAAGAAGGGGGTCGGCCCAGGGGTGGGCGACACA...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCCTGCTTTGGGAAGGCTaGGGTTGCTGCCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSLLWEG*GCCREA
Trigger: AGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAG...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CGGCGGCGGCAGCCTCCTCCTTCCGCTCTTCCTTTACCCGCACAGATTCCTTGGATGTTCCAGTCGCTCTaGGGGCTGAAGAGATGCATC +
Preference number: 4 (lower is better)
Translates to: RRRQPPPSALPLPAQIPWMFQSL*GLKRCI
Trigger: GATGCATCTCTTCAGCCCCCAGAGCGACTGGAACAT...CCAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAGGAGGAGGCTGCCGCCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAACCATTGAAGGCGCCGTaGGGGCCCGAGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKPLKAP*GPEALL
Trigger: CAGCAAAGCCTCGGGCCCCCACGGCGCCTTCAATGG...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGCAGGCTGCTGCCATATaGAGAAGTGCGGAGGCCGAA +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRQAAAI*RSAEAE
Trigger: TTCGGCCTCCGCACTTCTCCATATGGCAGCAGCCTG...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp AGGCGAAGCTTGTGGGACGCCCAAAGGGATCAATGTGGGTGCTGGGGCTCAGGATGGTCTTGTGGGGGTTaGGGCTTCTGTTCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: RRSLWDAQRDQCGCWGSGWSCGG*GFCSQV
Trigger: AACCTGGGAACAGAAGCCTCAACCCCCACAAGACCA...TCCTGAGCCCCAGCACCCACATTGATCCCTTTGGGCGTCCCACAAGCTTCGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGACCCTACACTCCATGTaGTGCTTGGTCTTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRTLHSM*CLVLWG
Trigger: CCCCCACAAGACCAAGCATCACATGGAGTGTAGGGT...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCTCCCAGGGAGAAGCCTaGCTGTCCCTTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFASQGEA*LSLPGS
Trigger: AGAGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGA...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTAGGGATCAATGTGGGTaGTGGGGCTCAGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVRDQCG*WGSGRV
Trigger: GACCCTTCCTGAGCCCCAGCACCCACATTGATCCCT...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGGAAAGGTCAGAGGACTaGGGTGCAGGCGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEERSED*GAGGPM
Trigger: CATGGGGCCGCCTGCACCGCAGTCCTCTGACCTTTC...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGTGGGAAGGCTGGGGTTaGTGCCGTGAGGCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEWEGWG*CREAAE
Trigger: TTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCA...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCTGGGTGTGCTGGTGCTaGTGGTTGTGCTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSWVCWC*WLCWWN
Trigger: GTTCCACCAGCACAACCACCAGCACCAGCACACCCA...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGTGGTTTCCTCAAAGGTaGCCGGAAATGGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQWFPQR*PEMVGD
Trigger: ATCCCCGACCATTTCCGGCCACCTTTGAGGAAACCA...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCGGCACACCACTTCCCTaGTTTCCTCAAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSGTPLP*FPQRWP
Trigger: CGGCCACCTTTGAGGAAACCAGGGAAGTGGTGTGCC...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTCGAAAGTCAAGCTTGTaGGAGTCACCCTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALRKSSL*ESPFIF
Trigger: GAAAATGAAGGGTGACTCCCACAAGCTTGACTTTCG...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACGCCAGCACAGCGATCTaGTGGGCTAGGGCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENASTAI*WARAQK
Trigger: TTTCTGGGCCCTAGCCCACCAGATCGCTGTGCTGGC...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCTGCTGCCAACCAGGTTaGCTCCAGGAAGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSCCQPG*LQEAST
Trigger: TGTGCTGGCTTCCTGGAGCCAACCTGGTTGGCAGCA...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGCAGGAAGGGAACTGTTaGGAGGGGCACCCCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQQEGNC*EGHPCK
Trigger: TTTACAGGGGTGCCCCTCCCAACAGTTCCCTTCCTG...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGCAGGAAGGGAACTGTTaGGAGGGGCACCCCTGTAAA +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRQEGNC*EGHPCK
Trigger: TTTACAGGGGTGCCCCTCCCAACAGTTCCCTTCCTG...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACTTGGTCATCTCCTGCTaGCCCCACCTTCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENLVISC*PHLPRE
Trigger: CTCCCTGGGAAGGTGGGGCCAGCAGGAGATGACCAA...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GCTGTAGAGCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACCCCTTCTTTGGTGTGTaGTACATGGTGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AVEQGVSRFQTVEAGSGHPFFGV*YMVTFS
Trigger: AGAGAAGGTCACCATGTACCACACACCAAAGAAGGG...GTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGCTCTACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR TCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACTGGCTGGTGAGGTTATaGCCTTTGCCCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENWLVRL*PLPSSP
Trigger: AGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCA...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAACTGAGATTTAGAGGCTaGGCCTTTGGGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKLRFRG*AFGGGG
Trigger: GCCCCCACCCCCAAAGGCTCAGCCTCTAAATCTCAG...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCGTGTGTGGTACATGGTaGCCTTCTCTGGCCACCCTT +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSVCGTW*PSLATL
Trigger: AAGGGTGGCCAGAGAAGGTCACCATGTACCACACAC...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTAGGGTTTTGTTAGATTaGCCCCTGCCTTCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPRVLLD*PLPSRL
Trigger: CAACCTAGAAGGCAGGGGTCAATCTAACAAAACCCT...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGCGTGAAAGGGTTGGCTaGAGCGTGGACGGCACCAGT +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVERERVG*SVDGTS
Trigger: ACTGGTGCCGTCCACGCTGCAGCCAACCCTTTCACG...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTGGGGGCTGAAGAGATaGATCCTTCTGCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVWGLKR*ILLQGL
Trigger: GAGGCCTTGCAGAAGGATGCATCTCTTCAGCCCCCA...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACTGCTGGTGGTTGTGCTaGTGGAACTGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENCWWLC*WNWKAR
Trigger: CCTGGCCTTCCAGTTCCACCAGCACAACCACCAGCA...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCTGCTGGTGGGTGTGCTaGTGCTGGTGGTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFACWWVC*CWWLCW
Trigger: CCAGCACAACCACCAGCACCAGCACACCCACCAGCA...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTATTTCTCAAACATGTaGGGGCCGTGGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVYFSNM*GPWGGS
Trigger: GCTGCCACCCCACGGCCCCCACATGTTTGAGAAATA...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGCGAAAGTCAAGCTTGTaGGAGTCACCCTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQRKSSL*ESPFIF
Trigger: GAAAATGAAGGGTGACTCCCACAAGCTTGACTTTCG...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GAAGGCAGGGCAGGAGGTCATTCCGAAAGTCAAGCTTGTGGGAGTCACCCTTCAAGCACAGCGATCTGGTaGGCTAGGGCCCAGAAACGG +
Preference number: 4 (lower is better)
Translates to: EGRAGGHSESQACGSHPSSTAIW*ARAQKR
Trigger: CCGTTTCTGGGCCCTAGCCCACCAGATCGCTGTGCT...TGAAGGGTGACTCCCACAAGCTTGACTTTCGGAATGACCTCCTGCCCTGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACCAAAAGGGCTCCCGGTaGGGTCTTGCTGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENQKGSR*GLAEKV
Trigger: CACCTTCTCAGCAAGACCCCACCGGGAGCCCTTTTG...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGTTTGCCCTCCAGCCCTaGCTTAAAACCTCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQFALQP*LKTSAL
Trigger: TAGGGCTGAGGTTTTAAGCCAGGGCTGGAGGGCAAA...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGCTGAGCCTTTGGGGGTaGGGGCAGAGTGAACGGGAA +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVELSLWG*GQSERE
Trigger: TTCCCGTTCACTCTGCCCCCACCCCCAAAGGCTCAG...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTCCCTTCTTTGGTGTGTaGTACATGGTGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAPFFGV*YMVTFS
Trigger: AGAGAAGGTCACCATGTACCACACACCAAAGAAGGG...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGCTGCTTTGGGAAGGCTaGGGTTGCTGCCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVELLWEG*GCCREA
Trigger: AGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAG...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGTGGCTGGTGAGGTTATaGCCTTTGCCCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEWLVRL*PLPSSP
Trigger: AGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCA...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTAGAGGTGGTGGAGTCTaGGATTTAGAGGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVRGGGV*DLEAEP
Trigger: AGGCTCAGCCTCTAAATCTCAGACTCCACCACCTCT...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAATGGGGTGAAGGGGACTaGGCCATTAAGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKWGEGD*AIKRWW
Trigger: CCACCACCTCTTAATGGCTCAGTCCCCTTCACCCCA...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTCGAGGCTTTGCTGGTTaGGACAGTAAAGGATGGGTC +
Preference number: 4 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVRGFAG*DSKGWV
Trigger: GACCCATCCTTTACTGTCTCAACCAGCAAAGCCTCG...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGAGGGATCAATGTGGGTaGTGGGGCTCAGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVERDQCG*WGSGRV
Trigger: GACCCTTCCTGAGCCCCAGCACCCACATTGATCCCT...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGTTCCGCTTCCCAGAATaGTTCAGCCGATGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRFRFPE*FSRCSS
Trigger: ACTGGAACATCGGCTGAAGCATTCTGGGAAGCGGAA...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGACCACGGAGAGTTTTaGTTCACAGTTCCCATTGAA +
Preference number: 4 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWDHGEF*FTVPIE
Trigger: TTCAATGGGAACTGTGAAGCAAAACTCTCCGTGGTC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGCGAGAGTTCAGGTCCTaGCCGATCAGGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEREFRS*PIRSCS
Trigger: TGAGCAGGACCTGATCGGCCAGGACCTGAACTCTCG...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGGATCAATGTGGGTGCTaGGGCTCAGGAAGGGTCCGT +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEDQCGC*GSGRVR
Trigger: ACGGACCCTTCCTGAGCCCCAGCACCCACATTGATC...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGATGTACAAAAGGTCTTaGGGCTATGTGAAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRMYKRS*GYVKGV
Trigger: CACCCCTTTCACATAGCCCCAAGACCTTTTGTACAT...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCTGGCCACCCTTAGCCTaGGGCAGGGTTTTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAWPPLA*GRVLEN
Trigger: GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGCCCTTCTTTGGTGTGTaGTACATGGTGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQPFFGV*YMVTFS
Trigger: AGAGAAGGTCACCATGTACCACACACCAAAGAAGGG...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCATGTTCCAGTCGCTCTaGGGGCTGAAGAGATGCATC +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSMFQSL*GLKRCI
Trigger: GATGCATCTCTTCAGCCCCCAGAGCGACTGGAACAT...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGTTCTTCTCCGCTTATTaGGCCATTTTCGGGCCCGAT +
Preference number: 4 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQFFSAY*AIFGPD
Trigger: ATCGGGCCCGAAAATGGCCCAATAAGCGGAGAAGAA...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCAGGCTGCTGCCATATaGAGAAGTGCGGAGGCCGAA +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAQAAAI*RSAEAE
Trigger: TTCGGCCTCCGCACTTCTCCATATGGCAGCAGCCTG...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAAACCCTACACTCCATGTaGTGCTTGGTCTTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKTLHSM*CLVLWG
Trigger: CCCCCACAAGACCAAGCATCACATGGAGTGTAGGGT...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAACCTCTGCTCTCCCAGTaGCCCTACACTCCATGTGAT +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKPLLSQ*PYTPCD
Trigger: ATCACATGGAGTGTAGGGTCACTGGGAGAGCAGAGG...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCCAAAGGGATCAATGTaGGTGCTGGGGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAPKGSM*VLGLRK
Trigger: CTTCCTGAGCCCCAGCACCCACATTGATCCCTTTGG...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAACCAAAGGGATCAATGTaGGTGCTGGGGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKPKGSM*VLGLRK
Trigger: CTTCCTGAGCCCCAGCACCCACATTGATCCCTTTGG...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGCCAAAGGGATCAATGTaGGTGCTGGGGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEPKGSM*VLGLRK
Trigger: CTTCCTGAGCCCCAGCACCCACATTGATCCCTTTGG...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAAGAGGCGAAGCTTGTaGGACGCCCAAAGGGATCAA +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENKRRSL*DAQRDQ
Trigger: TTGATCCCTTTGGGCGTCCCACAAGCTTCGCCTCTT...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR TCA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAACGAGGCTTTGCTGGTTaGGACAGTAAAGGATGGGTC +
Preference number: 4 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKRGFAG*DSKGWV
Trigger: GACCCATCCTTTACTGTCTCAACCAGCAAAGCCTCG...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCAAGAGGCGAAGCTTGTaGGACGCCCAAAGGGATCAA +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFAKRRSL*DAQRDQ
Trigger: TTGATCCCTTTGGGCGTCCCACAAGCTTCGCCTCTT...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGTTTGCCCTCCAGCCCTaGCTTAAAACCTCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEFALQP*LKTSAL
Trigger: TAGGGCTGAGGTTTTAAGCCAGGGCTGGAGGGCAAA...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp AGGCGAAGCTTGTGGGACGCCCAAAGGGATCAATGTGGGTGCTGGGGCTCAGGAATGTACAAAAGGTCTTaGGGCTATGTGAAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RRSLWDAQRDQCGCWGSGMYKRS*GYVKGV
Trigger: CACCCCTTTCACATAGCCCCAAGACCTTTTGTACAT...TCCTGAGCCCCAGCACCCACATTGATCCCTTTGGGCGTCCCACAAGCTTCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543786.5
3UTR CAA 72 bp GGAAGGCAGGGCAGGAGGTCATTCCGAAAGTCAAGCTaGTGGGAGTCACCCTTCATTTTCTCCTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GRQGRRSFRKSS*WESPFIFSWCL
Trigger: GAGACACCAGGAGAAAATGAAGGGTGACTCCCACAAGCTTGACTTTCGGAATGACCTCCTGCCCTGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CCA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCATGTACAAAAGGTCTTaGGGCTATGTGAAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSMYKRS*GYVKGV
Trigger: CACCCCTTTCACATAGCCCCAAGACCTTTTGTACAT...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCTCCTGTTGTCTCCTTTaGAGTCTTAGGGCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFASCCLL*SLRALL
Trigger: GAGAAGCGCCCTAAGACTCCAAAGGAGACAACAGGA...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CCA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACCGAAAGTCAAGCTTGTaGGAGTCACCCTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENRKSSL*ESPFIF
Trigger: GAAAATGAAGGGTGACTCCCACAAGCTTGACTTTCG...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR GCA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCGACCACGGAGAGTTTTaGTTCACAGTTCCCATTGAA +
Preference number: 4 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFADHGEF*FTVPIE
Trigger: TTCAATGGGAACTGTGAAGCAAAACTCTCCGTGGTC...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS CCA 90 bp GCCCGAAGCGGCCTGTCCGCAGGCCCGGGGTCGCAGGCGCGGCGCTaGCGGCTGCACAGTGACGAGAGGGCCACGGCTTCTCCTTTAAAG +
Preference number: 5 (lower is better)
Translates to: ARSGLSAGPGSQARR*RLHSDERATASPLK
Trigger: CTTTAAAGGAGAAGCCGTGGCCCTCTCGTCACTGTGCAGCCGCCAGCGCCGCGCCTGCGACCCCGGGCCTGCGGACAGGCCGCTTCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CAA 90 bp GCAAGGGGTGAGCAGGTTCCAGACCGTAGAGGCGGGCAGCGGCCACGGCCCCGGAAGACGGCGCCGGAGTaGAATGTGGGGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: ARGEQVPDRRGGQRPRPRKTAPE*NVGLPR
Trigger: CCTGGGCAGCCCCACATTCAACTCCGGCGCCGTCTT...CCGGGGCCGTGGCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CAA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTAGAAGCGGGGTGGCCTaGCCAGGCGTGGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALRSGVA*PGVGVL
Trigger: CAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTCT...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp CGGGCGGCCTCAGGGGGCCGGACCCAGGCAGGAAAGGTCAGAGGACTGCGGTGCGCCTGGGGCAGGGTTTaGGAGAACAGGGTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: RAASGGRTQAGKVRGLRCAWGRV*ENRVQG
Trigger: TCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGC...GCACCGCAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CAA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCCCCCGGGGGCTGTTCTaGGCTCCGCTCCAGGCCCGA +
Preference number: 5 (lower is better)
Translates to: LLLWEGWGCCREAAEEAAPRGLF*APLQAR
Trigger: TCGGGCCTGGAGCGGAGCCAAGAACAGCCCCCGGGG...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACCCCCGGGGGCTGTTCTaGGCTCCGCTCCAGGCCCGA +
Preference number: 5 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHPRGLF*APLQAR
Trigger: TCGGGCCTGGAGCGGAGCCAAGAACAGCCCCCGGGG...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp GCTGGGGCTCAGGAAGGGTCCGTGGGCCCCGGGAGCTGCCGTGAAAGGGTTGGCTCACCAGCCCGGGCCTaGGGAGTAGCAGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: AGAQEGSVGPGSCRERVGSPARA*GVAGET
Trigger: AGTTTCTCCTGCTACTCCCAAGGCCCGGGCTGGTGA...GCCAACCCTTTCACGGCAGCTCCCGGGGCCCACGGACCCTTCCTGAGCCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CAA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACAGAAGCGGGGTGGCCTaGCCAGGCGTGGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHRSGVA*PGVGVL
Trigger: CAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTCT...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGAGAAGCGGGGTGGCCTaGCCAGGCGTGGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWRSGVA*PGVGVL
Trigger: CAGCACCCCCACGCCTGGCAAGGCCACCCCGCTTCT...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGAAGACGGCGCCGGAGTaGAATGTGGGGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQKTAPE*NVGLPR
Trigger: CCTGGGCAGCCCCACATTCAACTCCGGCGCCGTCTT...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGCGCCTGCTGCTTaGGGAAGGCTGGGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQEAPAA*GRLGLL
Trigger: CAGCAACCCCAGCCTTCCCAAAGCAGCAGGCGCCTC...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGAGGCGAGGCCCCAAGTaGTCCAGCTCCCGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWRRGPK*SSSRPL
Trigger: AAGGGGCCGGGAGCTGGACAACTTGGGGCCTCGCCT...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CAA 90 bp TGCCGTGAGGCTGCCGAAGAAGCTGCCTGTGTCGCCCACCCCTGGGCCGACCCCTGGGGGCCCGAGGCTTaGCTGGTTGAGACAGTAAAG +
Preference number: 5 (lower is better)
Translates to: CREAAEEAACVAHPWADPWGPEA*LVETVK
Trigger: CTTTACTGTCTCAACCAGCAAAGCCTCGGGCCCCCA...GGGGTCGGCCCAGGGGTGGGCGACACAGGCAGCTTCTTCGGCAGCCTCACGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS CCA 90 bp AGGTGGCCGGAAATGGTCGGGGATCTGGGGATGGCAAAGGAGAGATaGGAGGCGACTCAGACCCGAGTCCTGGGCCAGGCGCCTCGCATC +
Preference number: 5 (lower is better)
Translates to: RWPEMVGDLGMAKER*EATQTRVLGQAPRI
Trigger: GATGCGAGGCGCCTGGCCCAGGACTCGGGTCTGAGTCGCCTCCCATCTCTCCTTTGCCATCCCCAGATCCCCGACCATTTCCGGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS-3UTR CAA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTGCTGCCGTGAAAGGGTaGGCTGCAGCGTGGACGGCA +
Preference number: 5 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPAAVKG*AAAWTA
Trigger: TGCCGTCCACGCTGCAGCCAACCCTTTCACGGCAGC...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTACCCGCACAGATTCCTaGGTTGGCCGAGGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPTRTDS*VGRGPS
Trigger: GGAGGGGCCTCGGCCAACCAAGGAATCTGTGCGGGT...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGACGGGAGGGGGCACTTaGGCCTCTGGCTTAGTGAGC +
Preference number: 5 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQTGGGT*ASGLVS
Trigger: GCTCACTAAGCCAGAGGCCAAAGTGCCCCCTCCCGT...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp GGCCTCTGGCTTAGTGAGCCCTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTGTGAACGGGAACATGTaGGGGGAACCGGGGCTGTCA +
Preference number: 5 (lower is better)
Translates to: GLWLSEPLGRQAQGLEALVNGNM*GEPGLS
Trigger: TGACAGCCCCGGTTCCCCCAACATGTTCCCGTTCAC...AAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGGGCTCACTAAGCCAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGAGGCGCCTGCTGCTTaGGGAAGGCTGGGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWEAPAA*GRLGLL
Trigger: CAGCAACCCCAGCCTTCCCAAAGCAGCAGGCGCCTC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCGCTTCACAGTTCCCATaGAAGGCGCCGTGGGGGCCC +
Preference number: 5 (lower is better)
Translates to: LLLWEGWGCCREAAEEAAASQFP*KAPWGP
Trigger: GGGCCCCCACGGCGCCTTCAATGGGAACTGTGAAGC...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS GCA 90 bp GGGCCAGGCGCCTCGCATCTCCACAGCATCCACTCACCCCCAACATaGCTGAGACACTGGGACTCCCTCAAACCCTTCCTGCTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GPGASHLHSIHSPPT*LRHWDSLKPFLLRP
Trigger: GGGCCTGAGCAGGAAGGGTTTGAGGGAGTCCCAGTGTCTCAGGCATGTTGGGGGTGAGTGGATGCTGTGGAGATGCGAGGCGCCTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS CCA 90 bp TGGGGATGGCAAAGGAGAGATGGGAGGCGACTCAGACCCGAGTCCTaGGCCAGGCGCCTCGCATCTCCACAGCATCCACTCACCCCCAAC +
Preference number: 5 (lower is better)
Translates to: WGWQRRDGRRLRPES*ARRLASPQHPLTPN
Trigger: GTTGGGGGTGAGTGGATGCTGTGGAGATGCGAGGCGCCTGGCCCAGGACTCGGGTCTGAGTCGCCTCCCATCTCTCCTTTGCCATCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS-3UTR CAA 90 bp CTTGGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTGCACAGATTCCTTGGTaGGCCGAGGCCCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: LGEAGPGPRGPYRGKGVPAQIPW*AEAPPH
Trigger: GTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTGC...AGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGGCACAGATTCCTTGGTaGGCCGAGGCCCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWAQIPW*AEAPPH
Trigger: GTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTGC...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCGCACAGATTCCTTGGTaGGCCGAGGCCCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: LLLWEGWGCCREAAEEAAAQIPW*AEAPPH
Trigger: GTGAGGAGGGGCCTCGGCCAACCAAGGAATCTGTGC...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp CTGCTGCTTTGGGAAGGCTGGGGTTGCTGCCGTGAGGCTGCCGAAGAAGCTGCCACGGGAGGGGGCACTTaGGCCTCTGGCTTAGTGAGC +
Preference number: 5 (lower is better)
Translates to: LLLWEGWGCCREAAEEAATGGGT*ASGLVS
Trigger: GCTCACTAAGCCAGAGGCCAAAGTGCCCCCTCCCGT...GGCAGCTTCTTCGGCAGCCTCACGGCAGCAACCCCAGCCTTCCCAAAGCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp GGGGAGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGCCAAAGAGGCGAAGCTaGTGGGACGCCCAAAGGGAT +
Preference number: 5 (lower is better)
Translates to: GEAGPGPRGPYRGKGVPQPKRRS*WDAQRD
Trigger: ATCCCTTTGGGCGTCCCACAAGCTTCGCCTCTTTGG...CTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp TGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGTCCACAGGCCGCTCCTaGTCTGAGCCTGGAGTCCGG +
Preference number: 5 (lower is better)
Translates to: WPPLAWGRVLENRVQGSRSTGRS*SEPGVR
Trigger: CCGGACTCCAGGCTCAGACAAGGAGCGGCCTGTGGA...CCTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp GTTGGGGGAACCGGGGCTGTCAGCCAAGTAGGAAGCTTCTGCCCTTCCCTCCAGACGGGAGGGGGCACTTaGGCCTCTGGCTTAGTGAGC +
Preference number: 5 (lower is better)
Translates to: VGGTGAVSQVGSFCPSLQTGGGT*ASGLVS
Trigger: GCTCACTAAGCCAGAGGCCAAAGTGCCCCCTCCCGT...CTGGAGGGAAGGGCAGAAGCTTCCTACTTGGCTGACAGCCCCGGTTCCCCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp GGAGCTGCCGTGAAAGGGTTGGCTGCAGCGTGGACGGCACCAGTCGCAGTGAAGGTGAACGGGAACATGTaGGGGGAACCGGGGCTGTCA +
Preference number: 5 (lower is better)
Translates to: GAAVKGLAAAWTAPVAVKVNGNM*GEPGLS
Trigger: TGACAGCCCCGGTTCCCCCAACATGTTCCCGTTCAC...CTTCACTGCGACTGGTGCCGTCCACGCTGCAGCCAACCCTTTCACGGCAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CAA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTGCCTGGGGCAGGGTTTaGGAGAACAGGGTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAAWGRV*ENRVQG
Trigger: TCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGC...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp CTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAGGGTTCAGGGAAGCAGGAGGCGCCTGCTGCTTaGGGAAGGCTGGGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LATLSLGQGFGEQGSGKQEAPAA*GRLGLL
Trigger: CAGCAACCCCAGCCTTCCCAAAGCAGCAGGCGCCTC...CTGCTTCCCTGAACCCTGTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS GCA 90 bp TTGGCTCCGCTCCAGGCCCGACACTTTAGGGACCACGGAGAGTTTTaGTTCACAGTTCCCATTGAAGGCGCCGTGGGGGCCCGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: LAPLQARHFRDHGEF*FTVPIEGAVGARGC
Trigger: ACAGCCTCGGGCCCCCACGGCGCCTTCAATGGGAACTGTGAAGCAAAACTCTCCGTGGTCCCTAAAGTGTCGGGCCTGGAGCGGAGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484152.1
CDS CCA 90 bp CCTGGTTTCCTCAAAGGTGGCCGGAAATGGTCGGGGATCTGGGGATaGCAAAGGAGAGATGGGAGGCGACTCAGACCCGAGTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PGFLKGGRKWSGIWG*QRRDGRRLRPESWA
Trigger: GGCCCAGGACTCGGGTCTGAGTCGCCTCCCATCTCTCCTTTGCCATCCCCAGATCCCCGACCATTTCCGGCCACCTTTGAGGAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS-3UTR CAA 90 bp ATCTCCTGCTGGCCCCACCTTCCCAGGGAGAAGCCTGACTGTCCCTTCCCGGCTCCAAAGAGGCGAAGCTaGTGGGACGCCCAAAGGGAT +
Preference number: 5 (lower is better)
Translates to: ISCWPHLPREKPDCPFPAPKRRS*WDAQRD
Trigger: ATCCCTTTGGGCGTCCCACAAGCTTCGCCTCTTTGG...AGCCGGGAAGGGACAGTCAGGCTTCTCCCTGGGAAGGTGGGGCCAGCAGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCTCCACAGGCCGCTCCTaGTCTGAGCCTGGAGTCCGG +
Preference number: 5 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSSTGRS*SEPGVR
Trigger: CCGGACTCCAGGCTCAGACAAGGAGCGGCCTGTGGA...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCACCCGCACAGATTCCTaGGTTGGCCGAGGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSTRTDS*VGRGPS
Trigger: GGAGGGGCCTCGGCCAACCAAGGAATCTGTGCGGGT...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp AGGCAGGCCCAGGGCCTAGAGGCCCTTACAGGGGCAAAGGTGTACCTCAGGAGGGGCACAGTTCTCAATTaGTCAGCGTCTGCTCGGCGG +
Preference number: 5 (lower is better)
Translates to: RQAQGLEALTGAKVYLRRGTVLN*SASARR
Trigger: CCGCCGAGCAGACGCTGACAAATTGAGAACTGTGCC...CCTCCTGAGGTACACCTTTGCCCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CAA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACTGGGGGCCCGAGGCTTaGCTGGTTGAGACAGTAAAG +
Preference number: 5 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHWGPEA*LVETVK
Trigger: CTTTACTGTCTCAACCAGCAAAGCCTCGGGCCCCCA...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS TCA 90 bp GGTCATCTAGCCAGGGAGCGGTACCAACCCAGGGCTTCCTTGACATaGAGTCACGCTCTTCTCCCCAACTCCCCAACACCAGCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: GHLARERYQPRASLT*SHALLPNSPTPAAW
Trigger: CCAGGCGGCTGGTGTTGGGGAGTTGGGGAGAAGAGCGTGACTTCATGTCAAGGAAGCCCTGGGTTGGTACCGCTCCCTGGCTAGATGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494101.1
CDS GCA 90 bp TCGCCCCAGTTCTCCCAACGGCACAGTTCTCAATTTGTCAGCGTCTaGTCGGCGGCTTCCCCTTTAAGGCTGGCGTTGCAGTCCGCCGAG +
Preference number: 5 (lower is better)
Translates to: SPQFSQRHSSQFVSV*SAASPLRLALQSAE
Trigger: CTCGGCGGACTGCAACGCCAGCCTTAAAGGGGAAGCCGCCGAGCAGACGCTGACAAATTGAGAACTGTGCCGTTGGGAGAACTGGGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS GCA 90 bp TTGGCTCCGCTCCAGGCCCGACACTTTAGGGACCACGGAGAGTTTTaGTTCACAGTTCCCATTGAAGGCGCCGTGGGGGCCCGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: LAPLQARHFRDHGEF*FTVPIEGAVGARGF
Trigger: AAAGCCTCGGGCCCCCACGGCGCCTTCAATGGGAACTGTGAAGCAAAACTCTCCGTGGTCCCTAAAGTGTCGGGCCTGGAGCGGAGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356166.11
ENST00000482749.1
ENST00000543786.5
CDS CCA 90 bp GATGGGCAGCGGGGGAGCTCCAGCACAAACTCCTGTTGTCTCCTTTaGAGTCTTAGGGCGCTTCTCCGCCAGGACTTCCCTACCCCTCCT +
Preference number: 5 (lower is better)
Translates to: DGQRGSSSTNSCCLL*SLRALLRQDFPTPP
Trigger: AGGAGGGGTAGGGAAGTCCTGGCGGAGAAGCGCCCTAAGACTCCAAAGGAGACAACAGGAGTTTGTGCTGGAGCTCCCCCGCTGCCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CAA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACAAGACGGCGCCGGAGTaGAATGTGGGGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENKTAPE*NVGLPR
Trigger: CCTGGGCAGCCCCACATTCAACTCCGGCGCCGTCTT...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACACCCGCACAGATTCCTaGGTTGGCCGAGGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENTRTDS*VGRGPS
Trigger: GGAGGGGCCTCGGCCAACCAAGGAATCTGTGCGGGT...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACTTGGTCTTGTGGGGGTaGAGGCTTCTGTTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHLVLWG*RLLFPG
Trigger: ACCTGGGAACAGAAGCCTCAACCCCCACAAGACCAA...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS CCA 90 bp CACTTCCCTGGTTTCCTCAAAGGTGGCCGGAAATGGTCGGGGATCTaGGGATGGCAAAGGAGAGATGGGAGGCGACTCAGACCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: HFPGFLKGGRKWSGI*GWQRRDGRRLRPES
Trigger: GGACTCGGGTCTGAGTCGCCTCCCATCTCTCCTTTGCCATCCCCAGATCCCCGACCATTTCCGGCCACCTTTGAGGAAACCAGGGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS-3UTR CAA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGTCAGGGTTCGTGCTCTaGGGCTGGAAGGCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVESGFVL*GWKAPC
Trigger: GCAGGGGGCCTTCCAGCCCAAGAGCACGAACCCTGA...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS-3UTR CAA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAATCCACAGGCCGCTCCTaGTCTGAGCCTGGAGTCCGG +
Preference number: 5 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKSTGRS*SEPGVR
Trigger: CCGGACTCCAGGCTCAGACAAGGAGCGGCCTGTGGA...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTCACCAGCCCGGGCCTaGGGAGTAGCAGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVSPARA*GVAGET
Trigger: AGTTTCTCCTGCTACTCCCAAGGCCCGGGCTGGTGA...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGAGGTCCTGCCCCCTGTaGGTCATCTCCTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVERSCPL*VISCWP
Trigger: GGGCCAGCAGGAGATGACCAACAGGGGGCAGGACCT...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp CTGTTCCCAGGTTCCATGACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCAGGTCCTGCCCCCTGTaGGTCATCTCCTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: LFPGSMTSEVAGEVMTFARSCPL*VISCWP
Trigger: GGGCCAGCAGGAGATGACCAACAGGGGGCAGGACCT...GGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGTCATGGAACCTGGGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAAAGGTCCTGCCCCCTGTaGGTCATCTCCTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKRSCPL*VISCWP
Trigger: GGGCCAGCAGGAGATGACCAACAGGGGGCAGGACCT...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCGTGAACGGGAACATGTaGGGGGAACCGGGGCTGTCA +
Preference number: 5 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSVNGNM*GEPGLS
Trigger: TGACAGCCCCGGTTCCCCCAACATGTTCCCGTTCAC...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp GTGTACCTCAGGAGGCCCCATGGCCCCCGAGATGAGCCACACTCCCATGCACACTTTCTTCTCCGCTTATaGGGCCATTTTCGGGCCCGA +
Preference number: 5 (lower is better)
Translates to: VYLRRPHGPRDEPHSHAHFLLRL*GHFRAR
Trigger: TCGGGCCCGAAAATGGCCCAATAAGCGGAGAAGAAA...GTGTGCATGGGAGTGTGGCTCATCTCGGGGGCCATGGGGCCTCCTGAGGTACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp GGAGCTGCCGTGAAAGGGTTGGCTGCAGCGTGGACGGCACCAGTCGCAGTGAAGTTTCTTCTCCGCTTATaGGGCCATTTTCGGGCCCGA +
Preference number: 5 (lower is better)
Translates to: GAAVKGLAAAWTAPVAVKFLLRL*GHFRAR
Trigger: TCGGGCCCGAAAATGGCCCAATAAGCGGAGAAGAAA...CTTCACTGCGACTGGTGCCGTCCACGCTGCAGCCAACCCTTTCACGGCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543786.5
CDS-3UTR CAA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAAGCTTCACAGTTCCCATaGAAGGCGCCGTGGGGGCCC +
Preference number: 5 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKASQFP*KAPWGP
Trigger: GGGCCCCCACGGCGCCTTCAATGGGAACTGTGAAGC...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356166.11
ENST00000543786.5
CDS TCA 90 bp AAACACAACTGGGAAACAGCACAGCCTGGATTCCCCTGCCAGTGCTaGGGTCCAGGCTGCTGCCATATGGAGAAGTGCGGAGGCCGAAGG +
Preference number: 5 (lower is better)
Translates to: KHNWETAQPGFPCQC*GPGCCHMEKCGGRR
Trigger: CCTTCGGCCTCCGCACTTCTCCATATGGCAGCAGCCTGGACCTCAGCACTGGCAGGGGAATCCAGGCTGTGCTGTTTCCCAGTTGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482749.1
CDS-3UTR CAA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCCCAAAGAGGCGAAGCTaGTGGGACGCCCAAAGGGAT +
Preference number: 5 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSPKRRS*WDAQRD
Trigger: ATCCCTTTGGGCGTCCCACAAGCTTCGCCTCTTTGG...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGCCGTCTCTGTCCGACTaGGGCCTTAGGGGATCCGGA +
Preference number: 5 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEPSLSD*GLRGSG
Trigger: TCCGGATCCCCTAAGGCCCAAGTCGGACAGAGACGG...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CAA 90 bp TGGTGTGTGGTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTCCTTTAAGGCTGGCGTaGCAGTCCGCCGAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: WCVVHGDLLWPPLAWGRVPLRLA*QSAEFS
Trigger: ACTGAACTCGGCGGACTGCAACGCCAGCCTTAAAGG...AACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTACCACACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS-3UTR CAA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGTCACCAGCCCGGGCCTaGGGAGTAGCAGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVESPARA*GVAGET
Trigger: AGTTTCTCCTGCTACTCCCAAGGCCCGGGCTGGTGA...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS TCA 90 bp CTCCCGTGCCTCCAGCCCCAGACCTTGGGACCAACCTTTGCTGGTTaGGACAGTAAAGGATGGGTCGAGGTCATCATCGGAGACCTCTTT +
Preference number: 5 (lower is better)
Translates to: LPCLQPQTLGPTFAG*DSKGWVEVIIGDLF
Trigger: AAAGAGGTCTCCGATGATGACCTCGACCCATCCTTTACTGTCTCAACCAGCAAAGGTTGGTCCCAAGGTCTGGGGCTGGAGGCACGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484152.1
CDS CCA 90 bp GCATGCGTCACACAGCCAGACAGAACAACTAACCTATCCCGCCACTaGAATGTCACCACGTCCCCAGCCAGGAACACCTTTCTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: ACVTQPDRTTNLSRH*NVTTSPARNTFLQA
Trigger: GGCTTGGAGAAAGGTGTTCCTGGCTGGGGACGTGGTGACATTCCAGTGGCGGGATAGGTTAGTTGTTCTGTCTGGCTGTGTGACGCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494101.1
CDS-3UTR CAA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACTTGGTCTTGTGGGGGTaGAGGCTTCTGTTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENLVLWG*RLLFPG
Trigger: ACCTGGGAACAGAAGCCTCAACCCCCACAAGACCAA...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS-3UTR CAA 90 bp ATTGACCCCTGCCTTCTAGGTTGGGCCCCAGCCTGGAGGCGCCTGCTGCTTTGGAATTTAAAAGACTTCTaGTGTGTGGGGGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: IDPCLLGWAPAWRRLLLWNLKDF*CVGEED
Trigger: GTCCTCCTCCCCCACACACAAGAAGTCTTTTAAATT...CCAAAGCAGCAGGCGCCTCCAGGCTGGGGCCCAACCTAGAAGGCAGGGGTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS GCA 90 bp TTGGAAAACCTCTGGCCTAGTCTTCCCTGTAGGAAACTGGTCCTGTaGGTTTCACAACGTTCCCGCAGCCCTGGGGTCTACACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: LENLWPSLPCRKLVL*VSQRSRSPGVYTAA
Trigger: TGCAGCAGTGTAGACCCCAGGGCTGCGGGAACGTTGTGAAACGCACAGGACCAGTTTCCTACAGGGAAGACTAGGCCAGAGGTTTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS-3UTR CAA 90 bp ACCTCAGAGGTGGCTGGTGAGGTTATGACCTTTGCCCTCCAGCCCTGGCTTAAATTGGTCTTGTGGGGGTaGAGGCTTCTGTTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: TSEVAGEVMTFALQPWLKLVLWG*RLLFPG
Trigger: ACCTGGGAACAGAAGCCTCAACCCCCACAAGACCAA...TTTAAGCCAGGGCTGGAGGGCAAAGGTCATAACCTCACCAGCCACCTCTGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS CCA 90 bp GAAGGAAGTTGGAAAACCTCTGGCCTAGTCTTCCCTGTAGGAAACTaGTCCTGTGCGTTTCACAACGTTCCCGCAGCCCTGGGGTCTACA +
Preference number: 5 (lower is better)
Translates to: EGSWKTSGLVFPVGN*SCAFHNVPAALGST
Trigger: TGTAGACCCCAGGGCTGCGGGAACGTTGTGAAACGCACAGGACCAGTTTCCTACAGGGAAGACTAGGCCAGAGGTTTTCCAACTTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS-3UTR CAA 90 bp CCTCTCCCTTCTCTAGAGGCTGTGACCTCTGCTCTCCCAGTGACCCTACACTCCTTCCGAAAGTCAAGCTaGTGGGAGTCACCCTTCATT +
Preference number: 5 (lower is better)
Translates to: PLPSLEAVTSALPVTLHSFRKSS*WESPFI
Trigger: AATGAAGGGTGACTCCCACAAGCTTGACTTTCGGAA...GGAGTGTAGGGTCACTGGGAGAGCAGAGGTCACAGCCTCTAGAGAAGGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS GCA 90 bp GCAGAGAAGCAGGCAAACCAAACCAAAACGTCAGAGGTCACTAGCTaGTGGCCCACAGGCCTCCCTCGCTTACAGATTTATTTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: AEKQANQTKTSEVTS*WPTGLPRLQIYLVH
Trigger: GTGGACCAAATAAATCTGTAAGCGAGGGAGGCCTGTGGGCCAGCAGCTAGTGACCTCTGACGTTTTGGTTTGGTTTGCCTGCTTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468966.1
CDS CCA 90 bp GAGAAGCAGGCAAACCAAACCAAAACGTCAGAGGTCACTAGCTGCTaGCCCACAGGCCTCCCTCGCTTACAGATTTATTTGGTCCACCAG +
Preference number: 5 (lower is better)
Translates to: EKQANQTKTSEVTSC*PTGLPRLQIYLVHQ
Trigger: CTGGTGGACCAAATAAATCTGTAAGCGAGGGAGGCCTGTGGGCCAGCAGCTAGTGACCTCTGACGTTTTGGTTTGGTTTGCCTGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468966.1
CDS-3UTR CAA 90 bp GTACATGGTGACCTTCTCTGGCCACCCTTAGCCTGGGGCAGGGTTTTGGAGAACTTCCGAAAGTCAAGCTaGTGGGAGTCACCCTTCATT +
Preference number: 5 (lower is better)
Translates to: VHGDLLWPPLAWGRVLENFRKSS*WESPFI
Trigger: AATGAAGGGTGACTCCCACAAGCTTGACTTTCGGAA...GTTCTCCAAAACCCTGCCCCAGGCTAAGGGTGGCCAGAGAAGGTCACCATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS TCA 90 bp TTTCAGCAGCCATGTGCTGAGCACTTCCTTGGGCCAGGAAGGTGTTaGGCTTTGACAAGCACCCTGTCGGTTAACCTCACAAAAAGCCCA +
Preference number: 5 (lower is better)
Translates to: FQQPCAEHFLGPGRC*ALTSTLSVNLTKSP
Trigger: TGGGCTTTTTGTGAGGTTAACCGACAGGGTGCTTGTCAAAGCTCAACACCTTCCTGGCCCAAGGAAGTGCTCAGCACATGGCTGCTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494101.1
CDS-3UTR CAA 90 bp TGCTCTCCCAGTGACCCTACACTCCATGTGATGCTTGGTCTTGTGGGGGTTGAGTTCCGAAAGTCAAGCTaGTGGGAGTCACCCTTCATT +
Preference number: 5 (lower is better)
Translates to: CSPSDPTLHVMLGLVGVEFRKSS*WESPFI
Trigger: AATGAAGGGTGACTCCCACAAGCTTGACTTTCGGAA...CTCAACCCCCACAAGACCAAGCATCACATGGAGTGTAGGGTCACTGGGAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287468.5
ENST00000356166.11
ENST00000543786.5
CDS TCA 72 bp GCGTCTCGGGCCCCCAGGCCGCTCTCCAGACGAAGCTaGCGACCAAGGCCTGGCGGGCGGCGGCGGCGACGA +
Preference number: 6 (lower is better)
Translates to: ASRAPRPLSRRS*RPRPGGRRRRR
Trigger: TCGTCGCCGCCGCCGCCCGCCAGGCCTTGGTCGTCAGCTTCGTCTGGAGAGCGGCCTGGGGGCCCGAGACGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS CCA 72 bp GGCCTGTCCGCAGGCCCGGGGTCGCAGGCGCGGCGCTaGCGGCTGCACAGTGACGAGAGGGCCACGGCTTCT +
Preference number: 6 (lower is better)
Translates to: GLSAGPGSQARR*RLHSDERATAS
Trigger: AGAAGCCGTGGCCCTCTCGTCACTGTGCAGCCGCCAGCGCCGCGCCTGCGACCCCGGGCCTGCGGACAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS CCA 72 bp CTGGGAGAGCCCGCTCGGCACCGGCCCCAGTCGTGGTaGCAGCTCAGGGTTCGTGCTCTTGGGCTGGAAGGC +
Preference number: 6 (lower is better)
Translates to: LGEPARHRPQSW*QLRVRALGLEG
Trigger: GCCTTCCAGCCCAAGAGCACGAACCCTGAGCTGCCACCACGACTGGGGCCGGTGCCGAGCGGGCTCTCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS CCA 72 bp GGCACTAGCAGCGGGTCGGGCCCCGGGGGCTGTTCTTaGCTCCGCTCCAGGCCCGACACTTTAGGGACCACG +
Preference number: 6 (lower is better)
Translates to: GTSSGSGPGGCS*LRSRPDTLGTT
Trigger: CGTGGTCCCTAAAGTGTCGGGCCTGGAGCGGAGCCAAGAACAGCCCCCGGGGCCCGACCCGCTGCTAGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356166.11
ENST00000482749.1
ENST00000484152.1
ENST00000543786.5
CDS GCA 72 bp TGGGTGTGCTGGTGGGTGTGCTGGTGCTGGTGGTTGTaGTGGTGGAACTGGAAGGCCAGGGGCCGGGCCGAG +
Preference number: 6 (lower is better)
Translates to: WVCWWVCWCWWL*WWNWKARGRAE
Trigger: CTCGGCCCGGCCCCTGGCCTTCCAGTTCCACCAGCACAACCACCAGCACCAGCACACCCACCAGCACACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS CAA 72 bp TGGTGGGTGTGCTGGTGGGTGTGCTGGTGCTGGTGGTaGTGCTGGTGGAACTGGAAGGCCAGGGGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: WWVCWWVCWCWW*CWWNWKARGRA
Trigger: GGCCCGGCCCCTGGCCTTCCAGTTCCACCAGCACAACCACCAGCACCAGCACACCCACCAGCACACCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS CCA 72 bp TGCTGGTGGGTGTGCTGGTGGGTGTGCTGGTGCTGGTaGTTGTGCTGGTGGAACTGGAAGGCCAGGGGCCGG +
Preference number: 6 (lower is better)
Translates to: CWWVCWWVCWCW*LCWWNWKARGR
Trigger: CCGGCCCCTGGCCTTCCAGTTCCACCAGCACAACCACCAGCACCAGCACACCCACCAGCACACCCACCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS CCA 72 bp AAGTGCTGGTGGGTGTGCTGGTGGGTGTGCTGGTGCTaGTGGTTGTGCTGGTGGAACTGGAAGGCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: KCWWVCWWVCWC*WLCWWNWKARG
Trigger: GCCCCTGGCCTTCCAGTTCCACCAGCACAACCACCAGCACCAGCACACCCACCAGCACACCCACCAGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS CCA 72 bp GGGGTGAAGTGCTGGTGGGTGTGCTGGTGGGTGTGCTaGTGCTGGTGGTTGTGCTGGTGGAACTGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: GVKCWWVCWWVC*CWWLCWWNWKA
Trigger: GGCCTTCCAGTTCCACCAGCACAACCACCAGCACCAGCACACCCACCAGCACACCCACCAGCACTTCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS CCA 72 bp GCAGAGGGTGAAGCAGAGAGTGACAGGGGCCAGAAGTaGGAGGCCCTGTTCAGGCCTCCTCCCAGACCGTCT +
Preference number: 6 (lower is better)
Translates to: AEGEAESDRGQK*EALFRPPPRPS
Trigger: AGACGGTCTGGGAGGAGGCCTGAACAGGGCCTCCCACTTCTGGCCCCTGTCACTCTCTGCTTCACCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494101.1
CDS CCA 72 bp CAAAGGAGAGATGGGAGGCGACTCAGACCCGAGTCCTaGGCCAGGCGCCTCGCATCTCCACAGCATCCACTC +
Preference number: 6 (lower is better)
Translates to: QRRDGRRLRPES*ARRLASPQHPL
Trigger: GAGTGGATGCTGTGGAGATGCGAGGCGCCTGGCCCAGGACTCGGGTCTGAGTCGCCTCCCATCTCTCCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS CCA 72 bp GAAATGGTCGGGGATCTGGGGATGGCAAAGGAGAGATaGGAGGCGACTCAGACCCGAGTCCTGGGCCAGGCG +
Preference number: 6 (lower is better)
Translates to: EMVGDLGMAKER*EATQTRVLGQA
Trigger: CGCCTGGCCCAGGACTCGGGTCTGAGTCGCCTCCCATCTCTCCTTTGCCATCCCCAGATCCCCGACCATTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS GCA 72 bp GTGAAGTGCTGGTGGGTGTGCTGGTGGGTGTGCTGGTaGTGGTGGTTGTGCTGGTGGAACTGGAAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: VKCWWVCWWVCW*WWLCWWNWKAR
Trigger: CCTGGCCTTCCAGTTCCACCAGCACAACCACCAGCACCAGCACACCCACCAGCACACCCACCAGCACTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287468.5
ENST00000356166.11
CDS CAA 72 bp AGCGTCTGCTCGGCGGCTTCCCCTTTAAGGCTGGCGTaGCAGTCCGCCGAGTTCAGTGGCCACCCCTTTAAG +
Preference number: 6 (lower is better)
Translates to: SVCSAASPLRLA*QSAEFSGHPFK
Trigger: CTTAAAGGGGTGGCCACTGAACTCGGCGGACTGCAACGCCAGCCTTAAAGGGGAAGCCGCCGAGCAGACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS CAA 72 bp AGGCCCCGTTGGAGAGGGCAGCCAAAGAGGCGAAGCTaGTGGGACGCCCAAAGGGATCTGTGGGAGGAAAGG +
Preference number: 6 (lower is better)
Translates to: RPRWRGQPKRRS*WDAQRDLWEER
Trigger: CCTTTCCTCCCACAGATCCCTTTGGGCGTCCCACAAGCTTCGCCTCTTTGGCTGCCCTCTCCAACGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494101.1
CDS TCA 72 bp CCCAGTCTAGGCATCTCTCCTCCAGCACAAGGTTTCTaGACCAAGCCCCAGGGAGCTGCCCTGCTGGAAGGC +
Preference number: 6 (lower is better)
Translates to: PSLGISPPAQGF*TKPQGAALLEG
Trigger: GCCTTCCAGCAGGGCAGCTCCCTGGGGCTTGGTTCAGAAACCTTGTGCTGGAGGAGAGATGCCTAGACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS GCA 72 bp CTCCAGGCCCGACACTTTAGGGACCACGGAGAGTTTTaGTTCACAGTTCCCATTGAAGGCGCCGTGGGGGCC +
Preference number: 6 (lower is better)
Translates to: LQARHFRDHGEF*FTVPIEGAVGA
Trigger: GGCCCCCACGGCGCCTTCAATGGGAACTGTGAAGCAAAACTCTCCGTGGTCCCTAAAGTGTCGGGCCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356166.11
ENST00000482749.1
ENST00000484152.1
ENST00000543786.5
CDS CCA 72 bp AAGTCTCTTCCTCCTTTCCTCCGTCTCTGTCCGACTTaGGCCTTAGGGGATCCGGAACGGCCGATGGGCAGC +
Preference number: 6 (lower is better)
Translates to: KSLPPFLRLCPT*ALGDPERPMGS
Trigger: GCTGCCCATCGGCCGTTCCGGATCCCCTAAGGCCCAAGTCGGACAGAGACGGAGGAAAGGAGGAAGAGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS CCA 72 bp CTCAAAGGTGGCCGGAAATGGTCGGGGATCTGGGGATaGCAAAGGAGAGATGGGAGGCGACTCAGACCCGAG +
Preference number: 6 (lower is better)
Translates to: LKGGRKWSGIWG*QRRDGRRLRPE
Trigger: CTCGGGTCTGAGTCGCCTCCCATCTCTCCTTTGCCATCCCCAGATCCCCGACCATTTCCGGCCACCTTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS TCA 72 bp GCCAGGGAGCGGTACCAACCCAGGGCTTCCTTGACATaGAGTCACGCTCTTCTCCCCAACTCCCCAACACCA +
Preference number: 6 (lower is better)
Translates to: ARERYQPRASLT*SHALLPNSPTP
Trigger: TGGTGTTGGGGAGTTGGGGAGAAGAGCGTGACTTCATGTCAAGGAAGCCCTGGGTTGGTACCGCTCCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494101.1
CDS GCA 72 bp GCCTCGCATCTCCACAGCATCCACTCACCCCCAACATaGCTGAGACACTGGGACTCCCTCAAACCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: ASHLHSIHSPPT*LRHWDSLKPFL
Trigger: CAGGAAGGGTTTGAGGGAGTCCCAGTGTCTCAGGCATGTTGGGGGTGAGTGGATGCTGTGGAGATGCGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS CCA 72 bp CGGGGGAGCTCCAGCACAAACTCCTGTTGTCTCCTTTaGAGTCTTAGGGCGCTTCTCCGCCAGGACTTCCCT +
Preference number: 6 (lower is better)
Translates to: RGSSSTNSCCLL*SLRALLRQDFP
Trigger: AGGGAAGTCCTGGCGGAGAAGCGCCCTAAGACTCCAAAGGAGACAACAGGAGTTTGTGCTGGAGCTCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS CAA 72 bp AAAGTCTCTTCCTCCTTTCCTCCGTCTCTGTCCGACTaGGGCCTTAGGGGATCCGGAACGGCCGATGGGCAG +
Preference number: 6 (lower is better)
Translates to: KVSSSFPPSLSD*GLRGSGTADGQ
Trigger: CTGCCCATCGGCCGTTCCGGATCCCCTAAGGCCCAAGTCGGACAGAGACGGAGGAAAGGAGGAAGAGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS CAA 90 bp CCCGACACTTTAGGGACCACGGAGAGTTTTGCTTCACAGTTCCCATaGAAGGCGCCGTGGGGGCCCGAGGCTTTGCTGGTTGAGACAGTA +
Preference number: 6 (lower is better)
Translates to: PDTLGTTESFASQFP*KAPWGPEALLVETV
Trigger: TACTGTCTCAACCAGCAAAGCCTCGGGCCCCCACGGCGCCTTCAATGGGAACTGTGAAGCAAAACTCTCCGTGGTCCCTAAAGTGTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356166.11
ENST00000482749.1
ENST00000543786.5
CDS TCA 72 bp GAATGCTTCAGCCGATGTTCCAGTCGCTCTGGGGGCTaGAGAGATGCATCCTTCTGCAAGGCCTCGAGGGTG +
Preference number: 6 (lower is better)
Translates to: ECFSRCSSRSGG*RDASFCKASRV
Trigger: CACCCTCGAGGCCTTGCAGAAGGATGCATCTCTTCAGCCCCCAGAGCGACTGGAACATCGGCTGAAGCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356166.11
ENST00000484152.1
ENST00000498588.1
ENST00000543786.5
CDS GCA 72 bp CTCTGGCCTAGTCTTCCCTGTAGGAAACTGGTCCTGTaGGTTTCACAACGTTCCCGCAGCCCTGGGGTCTAC +
Preference number: 6 (lower is better)
Translates to: LWPSLPCRKLVL*VSQRSRSPGVY
Trigger: GTAGACCCCAGGGCTGCGGGAACGTTGTGAAACGCACAGGACCAGTTTCCTACAGGGAAGACTAGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS CCA 72 bp CACAGCATCCACTCACCCCCAACATGCCTGAGACACTaGGACTCCCTCAAACCCTTCCTGCTCAGGCCCAAA +
Preference number: 6 (lower is better)
Translates to: HSIHSPPTCLRH*DSLKPFLLRPK
Trigger: TTTGGGCCTGAGCAGGAAGGGTTTGAGGGAGTCCCAGTGTCTCAGGCATGTTGGGGGTGAGTGGATGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS CCA 72 bp GGTTTCCTCAAAGGTGGCCGGAAATGGTCGGGGATCTaGGGATGGCAAAGGAGAGATGGGAGGCGACTCAGA +
Preference number: 6 (lower is better)
Translates to: GFLKGGRKWSGI*GWQRRDGRRLR
Trigger: TCTGAGTCGCCTCCCATCTCTCCTTTGCCATCCCCAGATCCCCGACCATTTCCGGCCACCTTTGAGGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS CAA 72 bp TTAGGGACCACGGAGAGTTTTGCTTCACAGTTCCCATaGAAGGCGCCGTGGGGGCCCGAGGCTTTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: LGTTESFASQFP*KAPWGPEALLV
Trigger: AACCAGCAAAGCCTCGGGCCCCCACGGCGCCTTCAATGGGAACTGTGAAGCAAAACTCTCCGTGGTCCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356166.11
ENST00000468966.1
ENST00000482749.1
ENST00000543786.5
CDS GCA 72 bp TTCTCCCAACGGCACAGTTCTCAATTTGTCAGCGTCTaGTCGGCGGCTTCCCCTTTAAGGCTGGCGTTGCAG +
Preference number: 6 (lower is better)
Translates to: FSQRHSSQFVSV*SAASPLRLALQ
Trigger: CTGCAACGCCAGCCTTAAAGGGGAAGCCGCCGAGCAGACGCTGACAAATTGAGAACTGTGCCGTTGGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS CCA 72 bp AACAGAGAGGCTCAGAGAGGTGAAATGACTTGCTGGTaGTCATCTAGCCAGGGAGCGGTACCAACCCAGGGC +
Preference number: 6 (lower is better)
Translates to: NREAQRGEMTCW*SSSQGAVPTQG
Trigger: GCCCTGGGTTGGTACCGCTCCCTGGCTAGATGACCACCAGCAAGTCATTTCACCTCTCTGAGCCTCTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494101.1
CDS CCA 72 bp GAGAGTTTTGCTTCACAGTTCCCATTGAAGGCGCCGTaGGGGCCCGAGGCTTTGCTGGTTGAGACAGTAAAG +
Preference number: 6 (lower is better)
Translates to: ESFASQFPLKAP*GPEALLVETVK
Trigger: CTTTACTGTCTCAACCAGCAAAGCCTCGGGCCCCCACGGCGCCTTCAATGGGAACTGTGAAGCAAAACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356166.11
ENST00000468966.1
ENST00000482749.1
ENST00000543786.5
CDS CCA 72 bp TCTACACTGCTGCAAGTGCTAAGGGGAGGGAGGCTCTaGCTCTCCTCACTTCACCAAGGGGCAGCTTATCTT +
Preference number: 6 (lower is better)
Translates to: STLLQVLRGGRL*LSSLHQGAAYL
Trigger: AAGATAAGCTGCCCCTTGGTGAAGTGAGGAGAGCCAGAGCCTCCCTCCCCTTAGCACTTGCAGCAGTGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS CCA 72 bp TGGAAAACCTCTGGCCTAGTCTTCCCTGTAGGAAACTaGTCCTGTGCGTTTCACAACGTTCCCGCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: WKTSGLVFPVGN*SCAFHNVPAAL
Trigger: CAGGGCTGCGGGAACGTTGTGAAACGCACAGGACCAGTTTCCTACAGGGAAGACTAGGCCAGAGGTTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570170.1
CDS CCA 72 bp ACACAGCCAGACAGAACAACTAACCTATCCCGCCACTaGAATGTCACCACGTCCCCAGCCAGGAACACCTTT +
Preference number: 6 (lower is better)
Translates to: TQPDRTTNLSRH*NVTTSPARNTF
Trigger: AAAGGTGTTCCTGGCTGGGGACGTGGTGACATTCCAGTGGCGGGATAGGTTAGTTGTTCTGTCTGGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494101.1
CDS GCA 72 bp CAGGCAAACCAAACCAAAACGTCAGAGGTCACTAGCTaGTGGCCCACAGGCCTCCCTCGCTTACAGATTTAT +
Preference number: 6 (lower is better)
Translates to: QANQTKTSEVTS*WPTGLPRLQIY
Trigger: ATAAATCTGTAAGCGAGGGAGGCCTGTGGGCCAGCAGCTAGTGACCTCTGACGTTTTGGTTTGGTTTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468966.1
CDS TCA 72 bp CTTTCCGCGTCACATATGTATCCAGCTTCCAGAGAGTaGCGGGAGGACGCCTCTTTTCTTCTCCGCTTATTG +
Preference number: 6 (lower is better)
Translates to: LSASHMYPASRE*REDASFLLRLL
Trigger: CAATAAGCGGAGAAGAAAAGAGGCGTCCTCCCGTCACTCTCTGGAAGCTGGATACATATGTGACGCGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356166.11
CDS GCA 72 bp TTAAGAATCCGGAGATTCCTCATTAAAACTCAGGCTTaGAGATTGCCTCAAGAATGGGCCCCCTGTTCTCGT +
Preference number: 6 (lower is better)
Translates to: LRIRRFLIKTQA*RLPQEWAPCSR
Trigger: ACGAGAACAGGGGGCCCATTCTTGAGGCAATCTGCAAGCCTGAGTTTTAATGAGGAATCTCCGGATTCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468966.1
CDS CAA 90 bp GCCCACAGGCCTCCCTCGCTTACAGATTTATTTGGTCCACCAGCGTaGGTAAAAGTTTTAAACCAACTGCAGATATTTAAGAATCCGGAG +
Preference number: 6 (lower is better)
Translates to: AHRPPSLTDLFGPPA*VKVLNQLQIFKNPE
Trigger: CTCCGGATTCTTAAATATCTGCAGTTGGTTTAAAACTTTTACCAACGCTGGTGGACCAAATAAATCTGTAAGCGAGGGAGGCCTGTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468966.1
CDS CAA 72 bp CCTCCCTCGCTTACAGATTTATTTGGTCCACCAGCGTaGGTAAAAGTTTTAAACCAACTGCAGATATTTAAG +
Preference number: 6 (lower is better)
Translates to: PPSLTDLFGPPA*VKVLNQLQIFK
Trigger: CTTAAATATCTGCAGTTGGTTTAAAACTTTTACCAACGCTGGTGGACCAAATAAATCTGTAAGCGAGGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468966.1