RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000166147

Ensembl transcript IDs: ENST00000316623.10, ENST00000537463.6, ENST00000558230.1, ENST00000559133.5, ENST00000560355.1, ENST00000560820.1, ENST00000674301.1, ENST00000682158.1, ENST00000682170.1, ENST00000683268.1, ENST00000684448.1

Found 1400 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTATTaGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCAT +
Preference number: 1 (lower is better)
Translates to: GSNQVDSHTGNRPRY*NSHSCRGPAQSHIH
Trigger: ATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR GCA 90 bp CCCCAGGAGGTCTTGCCAAGGAGTCTTCCACAGGGAGAGTCATCCTaGCCGTTGTTCTGGATCTTGAAACTTGGGAGACCCACACCAAAG +
Preference number: 1 (lower is better)
Translates to: PQEVLPRSLPQGESS*PLFWILKLGRPTPK
Trigger: CTTTGGTGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACGGGCAGGATGACTCTCCCTGTGGAAGACTCCTTGGCAAGACCTCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR CCA 90 bp TGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTaGCCACTGAGGCTGTTTCCTGGTCCTCCCAGACCTCTATGCACG +
Preference number: 1 (lower is better)
Translates to: WHIAHAVMKDALVIL*PLRLFPGPPRPLCT
Trigger: CGTGCATAGAGGTCTGGGAGGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR CCA 90 bp TTGCCAAGGAGTCTTCCACAGGGAGAGTCATCCTGCCCGTTGTTCTaGATCTTGAAACTTGGGAGACCCACACCAAAGGAGGGAACCGGT +
Preference number: 1 (lower is better)
Translates to: LPRSLPQGESSCPLF*ILKLGRPTPKEGTG
Trigger: ACCGGTTCCCTCCTTTGGTGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACGGGCAGGATGACTCTCCCTGTGGAAGACTCCTTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR CCA 90 bp CATTCCAGAAACACAGTGCCCTTGGCCTATGCGGAAGTAACCAGGTaGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATA +
Preference number: 1 (lower is better)
Translates to: HSRNTVPLAYAEVTR*TATQVTALGIGTAI
Trigger: TATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACTGTGTTTCTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR CCA 90 bp GTAGCTCCCACGGGTGTTGAGGCAGCGCCCATTCTCACAGATCCCTaGCTTCGTCTGACATTCATTCTCATCTACACAGCCTTCTCCATC +
Preference number: 1 (lower is better)
Translates to: VAPTGVEAAPILTDP*LRLTFILIYTAFSI
Trigger: GATGGAGAAGGCTGTGTAGATGAGAATGAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGCGCTGCCTCAACACCCGTGGGAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR TCA 90 bp CAGCATTCCGATTTGGTGACGGGGTTCCTGTTGCTGGAGCCGATCTaGCACATGTTTTGTAGCACCTCTGTGAAGCAGTACCCTTCCCGA +
Preference number: 1 (lower is better)
Translates to: QHSDLVTGFLLLEPI*HMFCSTSVKQYPSR
Trigger: TCGGGAAGGGTACTGCTTCACAGAGGTGCTACAAAACATGTGTCAGATCGGCTCCAGCAACAGGAACCCCGTCACCAAATCGGAATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR CCA 90 bp GTAGCTGCCTGCAGTGTTGATGCATTCGGCGTTGCGCTGGCACACTaGGCCGTTCTGACACTCGTCAATATCTTCACAAACCAACAACTT +
Preference number: 1 (lower is better)
Translates to: VAACSVDAFGVALAH*AVLTLVNIFTNQQL
Trigger: AAGTTGTTGGTTTGTGAAGATATTGACGAGTGTCAGAACGGCCCAGTGTGCCAGCGCAACGCCGAATGCATCAACACTGCAGGCAGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR CCA 90 bp TTGCATTCATCGATATCTGCTCCATTGGTCATGAATCCTCGGCCATaGGGACAGAGTTTCTTGAAAGCCACAGTCCCCTGGAAAGGGCAG +
Preference number: 1 (lower is better)
Translates to: LHSSISAPLVMNPRP*GQSFLKATVPWKGQ
Trigger: CTGCCCTTTCCAGGGGACTGTGGCTTTCAAGAAACTCTGTCCCCATGGCCGAGGATTCATGACCAATGGAGCAGATATCGATGAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR TCA 90 bp CCCCAGCCTTCTCCCTTCAAGGCACAGCAGCATTCCTGCTTGGAGTaGTTTCTGGATTTGGGTGATGAACACTTTCCTCCTTCAAACTTC +
Preference number: 1 (lower is better)
Translates to: PQPSPFKAQQHSCLE*FLDLGDEHFPPSNF
Trigger: GAAGTTTGAAGGAGGAAAGTGTTCATCACCCAAATCCAGAAATCACTCCAAGCAGGAATGCTGCTGTGCCTTGAAGGGAGAAGGCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR CCA 90 bp GCCACTGAGGCTGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTaGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACATTTA +
Preference number: 1 (lower is better)
Translates to: ATEAVSWSSQTSMHV*ASHRNFITTWCIHL
Trigger: TAAATGTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACAGCCTCAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR TCA 90 bp CTTTGCATTCGTCCATATCAACTGCTGAATCATCAGGTCCCACGATaGTCCCACTTCCATAAGGACATATCTGGCGGAAGGCCTCATCAG +
Preference number: 1 (lower is better)
Translates to: LCIRPYQLLNHQVPR*SHFHKDISGGRPHQ
Trigger: CTGATGAGGCCTTCCGCCAGATATGTCCTTATGGAAGTGGGATCATCGTGGGACCTGATGATTCAGCAGTTGATATGGACGAATGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR CCA 90 bp CAAATCTTGGCACCTTCTTCCACTGGAGGACAAGGAAAACCCTTCTaGACACAGACATTTGAAGCTGCCTTCAGTGTTACTGCATGTGCC +
Preference number: 1 (lower is better)
Translates to: QILAPSSTGGQGKPF*TQTFEAAFSVTACA
Trigger: GGCACATGCAGTAACACTGAAGGCAGCTTCAAATGTCTGTGTCCAGAAGGGTTTTCCTTGTCCTCCAGTGGAAGAAGGTGCCAAGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR TCA 90 bp ACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATTCATATaGCCCATAAGTGTTCACACATCGGAAGGCACAGAGCAGAGGATT +
Preference number: 1 (lower is better)
Translates to: TVFSEHISHGTFAFI*PISVHTSEGTEQRI
Trigger: AATCCTCTGCTCTGTGCCTTCCGATGTGTGAACACTTATGGGTCATATGAATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537463.6
ENST00000674301.1
3UTR CCA 90 bp GCACATTCCCGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATaGCCAACCCCCAATGGAAATACACGTCCCAGTTTTCAAGAATCA +
Preference number: 1 (lower is better)
Translates to: AHSRTFAGRMACQHK*PTPNGNTRPSFQES
Trigger: TGATTCTTGAAAACTGGGACGTGTATTTCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACGGGAATGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR CCA 90 bp CCTTCAAGGCACAGCAGCATTCCTGCTTGGAGTGATTTCTGGATTTaGGTGATGAACACTTTCCTCCTTCAAACTTCGCATAACAGTAGC +
Preference number: 1 (lower is better)
Translates to: PSRHSSIPAWSDFWI*VMNTFLLQTSHNSS
Trigger: GCTACTGTTATGCGAAGTTTGAAGGAGGAAAGTGTTCATCACCCAAATCCAGAAATCACTCCAAGCAGGAATGCTGCTGTGCCTTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR CCA 90 bp GGACATTTGCATGTGAAGCCGCCAATGGTGTTAACACATAGGAACTaGCAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAG +
Preference number: 1 (lower is better)
Translates to: GHLHVKPPMVLTHRN*QLCCLVAHSSRSLQ
Trigger: CTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTGCCAGTTCCTATGTGTTAACACCATTGGCGGCTTCACATGCAAATGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR GCA 90 bp AACAGCAGCAGGAAGCTTTGGAAACACCAACTCCAATTTCATTGCTaGAGGCTGTATCTCCATTGTCTCCTCGAGGTCGAATATCCAAAT +
Preference number: 1 (lower is better)
Translates to: NSSRKLWKHQLQFHC*RLYLHCLLEVEYPN
Trigger: ATTTGGATATTCGACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTGTTTCCAAAGCTTCCTGCTGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR CCA 90 bp CAAAGATGGCTGTCTTCTCAACATCCCAACTTGCAAGACTCACATTaGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTT +
Preference number: 1 (lower is better)
Translates to: QRWLSSQHPNLQDSH*LLSQTDPRYWRHQF
Trigger: AAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCAAGTTGGGATGTTGAGAAGACAGCCATCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR TCA 90 bp CCCCCAATGGAAATACACGTCCCAGTTTTCAAGAATCAACACATATaGCAAGGTAGCTTAGCTACACACATGAGAAGCCTGAGAAAGTGG +
Preference number: 1 (lower is better)
Translates to: PPMEIHVPVFKNQHI*QGSLATHMRSLRKW
Trigger: CCACTTTCTCAGGCTTCTCATGTGTGTAGCTAAGCTACCTTGTCATATGTGTTGATTCTTGAAAACTGGGACGTGTATTTCCATTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR TCA 90 bp GTCTCCGCTGATACCCGGGTCCACAGATGCACATATATGTGCCAATaGGGTTCTTGCATTCCATTTGTTTTTCAGTACAGTCATGTTTTC +
Preference number: 1 (lower is better)
Translates to: VSADTRVHRCTYMCQ*GSCIPFVFQYSHVF
Trigger: GAAAACATGACTGTACTGAAAAACAAATGGAATGCAAGAACCTCATTGGCACATATATGTGCATCTGTGGACCCGGGTATCAGCGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR GCA 90 bp TTTGTAGTCACCTGCCACATCAGAGAAAAACAAGAAGGCAGTATTTaGTGGGGAGAAGGAACCAGTGCACAGCAGATACTGATGAGTTTA +
Preference number: 1 (lower is better)
Translates to: FVVTCHIREKQEGSI*WGEGTSAQQILMSL
Trigger: TAAACTCATCAGTATCTGCTGTGCACTGGTTCCTTCTCCCCAGCAAATACTGCCTTCTTGTTTTTCTCTGATGTGGCAGGTGACTACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR TCA 90 bp TCCCTTCCTTTCCTTGCCCCCTTTCAAATACAGCATCTACCAAGATaGCCCCAAGGAAAGTACTTTCCTCTAGAAACAACCAGAATTGAT +
Preference number: 1 (lower is better)
Translates to: SLPFLAPFQIQHLPR*PQGKYFPLETTRID
Trigger: ATCAATTCTGGTTGTTTCTAGAGGAAAGTACTTTCCTTGGGGTCATCTTGGTAGATGCTGTATTTGAAAGGGGGCAAGGAAAGGAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR GCA 90 bp CTTATTGAACTTGCCATGTGCCTTGCACACAGGGCAATAAACATCTaGTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCT +
Preference number: 1 (lower is better)
Translates to: LIELAMCLAHRAINI*CLIKVRFTMISKLP
Trigger: AGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATTGCCCTGTGTGCAAGGCACATGGCAAGTTCAATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR GCA 90 bp ACATATGAAAATCAGAGCCTCAGTCTACTTATTGAACTTGCCATGTaGCTTGCACACAGGGCAATAAACATCTGCTGTCTGATCAAGGTC +
Preference number: 1 (lower is better)
Translates to: TYENQSLSLLIELAM*LAHRAINICCLIKV
Trigger: GACCTTGATCAGACAGCAGATGTTTATTGCCCTGTGTGCAAGGCACATGGCAAGTTCAATAAGTAGACTGAGGCTCTGATTTTCATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR CCA 90 bp GTAAGAGCTGGAAGGAGTTCTAGGATTCGAACCTTGTTACTGACGTaGGAAATATTGAAAGCAAAGATGGCTGTCTTCTCAACATCCCAA +
Preference number: 1 (lower is better)
Translates to: VRAGRSSRIRTLLLT*EILKAKMAVFSTSQ
Trigger: TTGGGATGTTGAGAAGACAGCCATCTTTGCTTTCAATATTTCCCACGTCAGTAACAAGGTTCGAATCCTAGAACTCCTTCCAGCTCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR GCA 90 bp GAAACATCTGTAACAGCGGCATGGGAAGCCAGTGAAATGGTCAGTTaGATGTACACAACACAAACACCACTAGTTAAAAATACTCCCTTA +
Preference number: 1 (lower is better)
Translates to: ETSVTAAWEASEMVS*MYTTQTPLVKNTPL
Trigger: TAAGGGAGTATTTTTAACTAGTGGTGTTTGTGTTGTGTACATGCAACTGACCATTTCACTGGCTTCCCATGCCGCTGTTACAGATGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR GCA 90 bp GGAAATATTGAAAGCAAAGATGGCTGTCTTCTCAACATCCCAACTTaGAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATT +
Preference number: 1 (lower is better)
Translates to: GNIESKDGCLLNIPT*KTHIGFCLRLILDI
Trigger: AATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCAAGTTGGGATGTTGAGAAGACAGCCATCTTTGCTTTCAATATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR TCA 90 bp GAAGTCCCAGTTATATCTGGAGTGTACCCAGTTTTACAAATGCAATaGTATGATCCTCTGTCATTGACACATTCCCCATTTCGGCAAACA +
Preference number: 1 (lower is better)
Translates to: EVPVISGVYPVLQMQ*YDPLSLTHSPFRQT
Trigger: TGTTTGCCGAAATGGGGAATGTGTCAATGACAGAGGATCATATCATTGCATTTGTAAAACTGGGTACACTCCAGATATAACTGGGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR TCA 90 bp TATGATCCTCTGTCATTGACACATTCCCCATTTCGGCAAACATCGTaGATAACCTTGCATTCATCGATATCTGCTCCATTGGTCATGAAT +
Preference number: 1 (lower is better)
Translates to: YDPLSLTHSPFRQTS*ITLHSSISAPLVMN
Trigger: ATTCATGACCAATGGAGCAGATATCGATGAATGCAAGGTTATTCACGATGTTTGCCGAAATGGGGAATGTGTCAATGACAGAGGATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR CCA 90 bp AGTCTAATTAAAATTTTTCCGGCTGAAACATCTGTAACAGCGGCATaGGAAGCCAGTGAAATGGTCAGTTGCATGTACACAACACAAACA +
Preference number: 1 (lower is better)
Translates to: SLIKIFPAETSVTAA*EASEMVSCMYTTQT
Trigger: TGTTTGTGTTGTGTACATGCAACTGACCATTTCACTGGCTTCCCATGCCGCTGTTACAGATGTTTCAGCCGGAAAAATTTTAATTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR GCA 90 bp GAATTAATCATAACTATTTTCTGTGCTATTTTATCACAGCCTAAGTaGTTGGCTCATACAATCATCTTGTCCTTACTCCAGACTAGGAGT +
Preference number: 1 (lower is better)
Translates to: ELIITIFCAILSQPK*LAHTIILSLLQTRS
Trigger: ACTCCTAGTCTGGAGTAAGGACAAGATGATTGTATGAGCCAAGCACTTAGGCTGTGATAAAATAGCACAGAAAATAGTTATGATTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR CCA 90 bp TCACAAGCAAGTCAGGTTAATGACACCAGACTCTGCTACTTTCAATaGATAAAACAAGGGATCGACTCATATGTTAAATTTTCTTCTAGT +
Preference number: 1 (lower is better)
Translates to: SQASQVNDTRLCYFQ*IKQGIDSYVKFSSS
Trigger: ACTAGAAGAAAATTTAACATATGAGTCGATCCCTTGTTTTATCCATTGAAAGTAGCAGAGTCTGGTGTCATTAACCTGACTTGCTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR GCA 90 bp AATCTAAATTTCTCACAAGCAAGTCAGGTTAATGACACCAGACTCTaGTACTTTCAATGGATAAAACAAGGGATCGACTCATATGTTAAA +
Preference number: 1 (lower is better)
Translates to: NLNFSQASQVNDTRL*YFQWIKQGIDSYVK
Trigger: TTTAACATATGAGTCGATCCCTTGTTTTATCCATTGAAAGTAGCAGAGTCTGGTGTCATTAACCTGACTTGCTTGTGAGAAATTTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR-3UTR TCA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGAGCTCCCACGGGTGTTaGGGCAGCGCCCATTCTCAC +
Preference number: 2 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLSSHGC*GSAHSH
Trigger: GTGAGAATGGGCGCTGCCTCAACACCCGTGGGAGCT...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR GCA 90 bp ACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCATTCCAGAAACACAGTGAGCCGGCGGGACACATaGACTTGTAGCTCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: TDRWLWVSSAHAHSRNTVSRRDT*TCSSPG
Trigger: CCCTGGGGAGCTACAAGTGCATGTGTCCCGCCGGCT...CACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR GCA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGTGCTTCTCCGTTTCCTaGCCCGTTTGGGGTAGCCAT +
Preference number: 2 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLCFSVS*PVWGSH
Trigger: ATGGCTACCCCAAACGGGGCAGGAAACGGAGAAGCA...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp CATATCTGGCGGAAGGCCTCATCAGGTTCCGTGGGGCAGAGCTCGCAGGGGTCTCAGGTAGTAGCCGGTTaGACAGCGGCACTGGAAACT +
Preference number: 2 (lower is better)
Translates to: HIWRKASSGSVGQSSQGSQVVAG*TAALET
Trigger: AGTTTCCAGTGCCGCTGTCCAACCGGCTACTACCTG...AGACCCCTGCGAGCTCTGCCCCACGGAACCTGATGAGGCCTTCCGCCAGATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTCCATGCTGGCAGCGGTaGTTACCCTCACACTCGTCC +
Preference number: 2 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVPCWQR*LPSHSS
Trigger: GGACGAGTGTGAGGGTAACCACCGCTGCCAGCATGG...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGCCCCCAATGATGTTCTaGCAGCCATGCTGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: WTATQVTALGIGTAIAAGPPMMF*QPCWQR
Trigger: CCGCTGCCAGCATGGCTGCCAGAACATCATTGGGGG...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp TTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTACTGACAGGTGGCTCTaGGTTTCCTCGGCCCATGCC +
Preference number: 2 (lower is better)
Translates to: LAYAEVTRWTATQVTALGTDRWL*VSSAHA
Trigger: GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGT...ACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTGCCGGTCTGATCAAGTaGGAATCCCCGCTGGCATTC +
Preference number: 2 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVAGLIK*ESPLAF
Trigger: GAATGCCAGCGGGGATTCTCACTTGATCAGACCGGC...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGACCTGTAGCCCCCAATaGTGTTCTGGCAGCCATGCT +
Preference number: 2 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGTCSPQ*CSGSHA
Trigger: AGCATGGCTGCCAGAACATCATTGGGGGCTACAGGT...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGCTGCTCCATTGGTCATaGATCCTCGGCCATGGGGAC +
Preference number: 2 (lower is better)
Translates to: WTATQVTALGIGTAIAAGLLHWS*ILGHGD
Trigger: GTCCCCATGGCCGAGGATTCATGACCAATGGAGCAG...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR GCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCTGGAACAGCCATAGCTaGAGGGGGCCTGCGCAGAGC +
Preference number: 2 (lower is better)
Translates to: AGRMVLGKSGRTFACEAAWNSHS*RGPAQS
Trigger: GCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCCA...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR GCA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGGGTTTCCTCGGCCCATaGCCATTCCAGAAACACAGT +
Preference number: 2 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLGFLGP*PFQKHS
Trigger: ACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACC...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGCTGAACTGTTCATACTaGAAGCCGGCGGGACACATG +
Preference number: 2 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLLNCSY*KPAGHM
Trigger: CATGTGTCCCGCCGGCTTCCAGTATGAACAGTTCAG...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGGCTGGCATTCACAGGTaGAGCTTCCAGGAGTGTTCT +
Preference number: 2 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGAGIHR*SFQECS
Trigger: AGAACACTCCTGGAAGCTTCACCTGTGAATGCCAGC...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCCAGCTGGAGCCGGTCTaGTCAAGTGAGAATCCCCGC +
Preference number: 2 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSQLEPV*SSENPR
Trigger: GCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTG...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR TCA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGGGACAGAGTTTCTTaGAAGCCACAGTCCCCTGGA +
Preference number: 2 (lower is better)
Translates to: WTATQVTALGIGTAIAAGGDRVS*KPQSPG
Trigger: TCCAGGGGACTGTGGCTTTCAAGAAACTCTGTCCCC...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR CCA 90 bp CATATCTGGCGGAAGGCCTCATCAGGTTCCGTGGGGCAGAGCTCGCAGGGGTCTAACGGTGATAGGATTTaGTCGGAAACCTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: HIWRKASSGSVGQSSQGSNGDRI*SETFPS
Trigger: GGAGGGGAAGGTTTCCGACCAAATCCTATCACCGTT...AGACCCCTGCGAGCTCTGCCCCACGGAACCTGATGAGGCCTTCCGCCAGATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CCA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCAGGGTTTGGGAGCCTaGTTGCACTCGTTCAGATCT +
Preference number: 2 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGQGLGA*LHSFRS
Trigger: AGATCTGAACGAGTGCAACCAGGCTCCCAAACCCTG...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTCCACGTCTTCACAGCTaGAGCCGGTCTGATCAAGTG +
Preference number: 2 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVPRLHS*SRSDQV
Trigger: CACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCCATGCTGGCAGCGGTaGTTACCCTCACACTCGTCC +
Preference number: 2 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHAPCWQR*LPSHSS
Trigger: GGACGAGTGTGAGGGTAACCACCGCTGCCAGCATGG...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGTTCTGGCAGCCATGCTaGCAGCGGTGGTTACCCTCA +
Preference number: 2 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLFWQPC*QRWLPS
Trigger: TGAGGGTAACCACCGCTGCCAGCATGGCTGCCAGAA...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp CTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGAAAGCCACAGTCCCCTaGAAAGGGCAGATCTCACAG +
Preference number: 2 (lower is better)
Translates to: LGLCGSNQVDSHTGNRPRKATVP*KGQISQ
Trigger: CTGTGAGATCTGCCCTTTCCAGGGGACTGTGGCTTT...CCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR GCA 90 bp TCATTGATGTCTTGGCATCCTCCACTGAACTGTTCATACTGGAAGCCGGCGGGATGGAACAGCCATAGCTaGAGGGGGCCTGCGCAGAGC +
Preference number: 2 (lower is better)
Translates to: SLMSWHPPLNCSYWKPAGWNSHS*RGPAQS
Trigger: GCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCCA...TCCCGCCGGCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAGACATCAATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCCCAATGATGTTCTaGCAGCCATGCTGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMPPMMF*QPCWQR
Trigger: CCGCTGCCAGCATGGCTGCCAGAACATCATTGGGGG...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCTGAACTGTTCATACTaGAAGCCGGCGGGACACATG +
Preference number: 2 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRLNCSY*KPAGHM
Trigger: CATGTGTCCCGCCGGCTTCCAGTATGAACAGTTCAG...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCTTCACCACTGACAGGTaGCTCTGGGTTTCCTCGGCC +
Preference number: 2 (lower is better)
Translates to: AGRMVLGKSGRTFACEAAFTTDR*LWVSSA
Trigger: GGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAA...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCTCAAGGCACTCGTCCTaGTTGGGGCTGGCGGTAAAC +
Preference number: 2 (lower is better)
Translates to: AGRMVLGKSGRTFACEAASRHSS*LGLAVN
Trigger: GTTTACCGCCAGCCCCAACCAGGACGAGTGCCTTGA...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR TCA 90 bp CCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAATCCCCGCTGGCATTGTAGCCTTTCGGGCATaGACACTGGTAACTCCCTTC +
Preference number: 2 (lower is better)
Translates to: PRLHSWSRSDQVRIPAGIVAFRA*TLVTPF
Trigger: GAAGGGAGTTACCAGTGTTCATGCCCGAAAGGCTAC...AATGCCAGCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp TTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTCTTGGCATCCTCCACTaGACTGTTCATACTGGAAGC +
Preference number: 2 (lower is better)
Translates to: LAYAEVTRWTATQVTALGLGILH*TVHTGS
Trigger: GCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAG...ACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTCCATCAGGTCTCCGCTaGTACCCGGGTCCACAGATG +
Preference number: 2 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGPSGLR*YPGPQM
Trigger: CATCTGTGGACCCGGGTATCAGCGGAGACCTGATGG...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR TCA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCTTGCTGGAGCCGATCTaGCACATGTTTTGTAGCACC +
Preference number: 2 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRLLEPI*HMFCST
Trigger: GGTGCTACAAAACATGTGTCAGATCGGCTCCAGCAA...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR GCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTCCTCCCAGACCTCTATaGACGTGTGGGCCAGTCACC +
Preference number: 2 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLPPRPL*TCGPVT
Trigger: GGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR GCA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTAGCCGGCGGGACACATaGACTTGTAGCTCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LDIGGISFVCASPFPAPFSRRDT*TCSSPG
Trigger: CCCTGGGGAGCTACAAGTGCATGTGTCCCGCCGGCT...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR GCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTCATCAGTTTCGTTTGTaGTTCTCCGTTTCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVHQFRL*FSVSCP
Trigger: GGGGCAGGAAACGGAGAAGCACAAACGAAACTGATG...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR GCA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGCTCAACATCCCAACTTaGAAGACTCACATTGGCTTC +
Preference number: 2 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLLNIPT*KTHIGF
Trigger: GAAGCCAATGTGAGTCTTGCAAGTTGGGATGTTGAG...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp CATATCTGGCGGAAGGCCTCATCAGGTTCCGTGGGGCAGAGCTCGCAGGGGTCTACAGCCAACTCGAGTTaGGTTCAGTTCAAAATCAGG +
Preference number: 2 (lower is better)
Translates to: HIWRKASSGSVGQSSQGSTANSS*VQFKIR
Trigger: CCTGATTTTGAACTGAACCCAACTCGAGTTGGCTGT...AGACCCCTGCGAGCTCTGCCCCACGGAACCTGATGAGGCCTTCCGCCAGATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCCCACGTCTTCACAGCTaGAGCCGGTCTGATCAAGTG +
Preference number: 2 (lower is better)
Translates to: AGRMVLGKSGRTFACEAAPRLHS*SRSDQV
Trigger: CACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTTCTGGCAGCCATGCTaGCAGCGGTGGTTACCCTCA +
Preference number: 2 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSFWQPC*QRWLPS
Trigger: TGAGGGTAACCACCGCTGCCAGCATGGCTGCCAGAA...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR CAA 90 bp GAGGTCTTGCCAAGGAGTCTTCCACAGGGAGAGTCATCCTGCCCGTaGTTCTGGATCTTGAAACTTGGGAGACCCACACCAAAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: EVLPRSLPQGESSCP*FWILKLGRPTPKEG
Trigger: TCCCTCCTTTGGTGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACGGGCAGGATGACTCTCCCTGTGGAAGACTCCTTGGCAAGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR TCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCGCTGGCATTCACAGGTaGAGCTTCCAGGAGTGTTCT +
Preference number: 2 (lower is better)
Translates to: AGRMVLGKSGRTFACEAAAGIHR*SFQECS
Trigger: AGAACACTCCTGGAAGCTTCACCTGTGAATGCCAGC...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTGCTCCTCCGCAGATGTaGGCGCTGAGGCATTCGTTT +
Preference number: 2 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGAPPQM*ALRHSF
Trigger: AAACGAATGCCTCAGCGCTCACATCTGCGGAGGAGC...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR GCA 90 bp AGGGAGCACTCATCAATATCTTCACAGGCTTTCCCGTCAGCACTGGGCACGAAGGCGGTATCCTCCTGGTaGATTGAGGCACTGGCCATT +
Preference number: 2 (lower is better)
Translates to: REHSSISSQAFPSALGTKAVSSW*IEALAI
Trigger: AATGGCCAGTGCCTCAATGCACCAGGAGGATACCGC...CTTCGTGCCCAGTGCTGACGGGAAAGCCTGTGAAGATATTGATGAGTGCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CCA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGACCTCTATGCACGTGTaGGCCAGTCACCGAAATTTC +
Preference number: 2 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLTSMHV*ASHRNF
Trigger: GAAATTTCGGTGACTGGCCCACACGTGCATAGAGGT...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR CCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATGGGCAGATCTCACAGTaGGGACCCCAGCCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHGQISQ*GPQPLP
Trigger: AGGGAGAGGCTGGGGTCCCCACTGTGAGATCTGCCC...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR GCA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCGTTTGGGAGCCTGGTTaGACTCGTTCAGATCTACAC +
Preference number: 2 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHAVWEPG*TRSDLH
Trigger: GTGTAGATCTGAACGAGTGCAACCAGGCTCCCAAAC...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR GCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCCATCAGTTTCGTTTGTaGTTCTCCGTTTCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: AGRMVLGKSGRTFACEAAHQFRL*FSVSCP
Trigger: GGGGCAGGAAACGGAGAAGCACAAACGAAACTGATG...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp TACCCTCACACTCGTCCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGATTCCCGTACGTTTGCTaGAAGGATGGCATGTCAGCA +
Preference number: 2 (lower is better)
Translates to: YPHTRPRLHSWSRSDQVRFPYVC*KDGMSA
Trigger: TGCTGACATGCCATCCTTCCAGCAAACGTACGGGAA...TCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGACGAGTGTGAGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR CCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCACCTCTATGCACGTGTaGGCCAGTCACCGAAATTTC +
Preference number: 2 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSTSMHV*ASHRNF
Trigger: GAAATTTCGGTGACTGGCCCACACGTGCATAGAGGT...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR CCA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCGGCAGTTGTGTTGCTTaGTTGCACACTCATCAAGAT +
Preference number: 2 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRGSCVA*LHTHQD
Trigger: ATCTTGATGAGTGTGCAACCAAGCAACACAACTGCC...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTGGCAGTTGTGTTGCTTaGTTGCACACTCATCAAGAT +
Preference number: 2 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVGSCVA*LHTHQD
Trigger: ATCTTGATGAGTGTGCAACCAAGCAACACAACTGCC...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGTTAACACATAGGAACTaGCAGTTGTGTTGCTTGGTT +
Preference number: 2 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLLTHRN*QLCCLV
Trigger: AACCAAGCAACACAACTGCCAGTTCCTATGTGTTAA...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp TCATTGATGTCTTGGCATCCTCCACTGAACTGTTCATACTGGAAGCCGGCGGGAAACCGCCCTCGGTATTaGAACAGCCATAGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: SLMSWHPPLNCSYWKPAGNRPRY*NSHSCR
Trigger: CCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTT...TCCCGCCGGCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAGACATCAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTGCGGAAGTAACCAGGTaGACAGCCACACAGGTAACC +
Preference number: 2 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGAEVTR*TATQVT
Trigger: GGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGC...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTTTCACCACTGACAGGTaGCTCTGGGTTTCCTCGGCC +
Preference number: 2 (lower is better)
Translates to: LDIGGISFVCASPFPAPFFTTDR*LWVSSA
Trigger: GGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAA...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp TCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTGTAGCCTTTCGGGCATaGACACTGGTAACTCCCTTC +
Preference number: 2 (lower is better)
Translates to: SSILEASVSFVLLRFLPRVAFRA*TLVTPF
Trigger: GAAGGGAGTTACCAGTGTTCATGCCCGAAAGGCTAC...ACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCCGCAGATGTGAGCGCTaGGGCATTCGTTTTCATCAA +
Preference number: 2 (lower is better)
Translates to: WSSQTSMHVWASHRNFITRRCER*GIRFHQ
Trigger: TTGATGAAAACGAATGCCTCAGCGCTCACATCTGCG...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR TCA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGGCTCCTCCGCAGATGTaGGCGCTGAGGCATTCGTTT +
Preference number: 2 (lower is better)
Translates to: CLRLILDIGGISFVCASPAPPQM*ALRHSF
Trigger: AAACGAATGCCTCAGCGCTCACATCTGCGGAGGAGC...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGACATCCATTTCACCACTaGCAGGTGGCTCTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGHPFHH*QVALGF
Trigger: GAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATG...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR TCA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGATCCCTGGCTTCGTCTaGCATTCATTCTCATCTACA +
Preference number: 2 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLIPGFV*HSFSST
Trigger: TGTAGATGAGAATGAATGTCAGACGAAGCCAGGGAT...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR CCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTTTCCCGTACGTTTGCTaGAAGGATGGCATGTCAGCA +
Preference number: 2 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFFPYVC*KDGMSA
Trigger: TGCTGACATGCCATCCTTCCAGCAAACGTACGGGAA...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR CCA 90 bp TGTAGGACCCATCCAAGTTTTGACAGGTACCTGGTGCACATTTTCTGGGTTCTACTTTCCCGTCAGCACTaGGCACGAAGCCCATGTCGC +
Preference number: 2 (lower is better)
Translates to: CRTHPSFDRYLVHIFWVLLSRQH*ARSPCR
Trigger: GCGACATGGGCTTCGTGCCCAGTGCTGACGGGAAAG...TAGAACCCAGAAAATGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTCAGGGTTTGGGAGCCTaGTTGCACTCGTTCAGATCT +
Preference number: 2 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGQGLGA*LHSFRS
Trigger: AGATCTGAACGAGTGCAACCAGGCTCCCAAACCCTG...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGCAGGACGTATGGTGTTaGGTAAATCCGGGAGGACAT +
Preference number: 2 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVQDVWC*VNPGGH
Trigger: ATGTCCTCCCGGATTTACCCAACACCATACGTCCTG...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp AACACAGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTATCAATGCAGGACGTATaGTGTTGGGTAAATCCGGGA +
Preference number: 2 (lower is better)
Translates to: NTVPLAYAEVTRWTATQVSMQDV*CWVNPG
Trigger: TCCCGGATTTACCCAACACCATACGTCCTGCATTGA...TACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp TACCCTCACACTCGTCCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGATCAATGCAGGACGTATaGTGTTGGGTAAATCCGGGA +
Preference number: 2 (lower is better)
Translates to: YPHTRPRLHSWSRSDQVRSMQDV*CWVNPG
Trigger: TCCCGGATTTACCCAACACCATACGTCCTGCATTGA...TCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGACGAGTGTGAGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp TCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTCTTCCAGGAGTGTTCTaGCAAATGCCCTTAGACCCG +
Preference number: 2 (lower is better)
Translates to: SSILEASVSFVLLRFLPRLPGVF*QMPLDP
Trigger: CGGGTCTAAGGGCATTTGCCAGAACACTCCTGGAAG...ACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTCGGGGTTCCTGTTGCTaGAGCCGATCTGACACATGT +
Preference number: 2 (lower is better)
Translates to: LDIGGISFVCASPFPAPFRGSCC*SRSDTC
Trigger: ACATGTGTCAGATCGGCTCCAGCAACAGGAACCCCG...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR TCA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCAGCCGGTCTGATCAAGTaGGAATCCCCGCTGGCATTC +
Preference number: 2 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPAGLIK*ESPLAF
Trigger: GAATGCCAGCGGGGATTCTCACTTGATCAGACCGGC...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATCCCGATTGTCCTGGGTaGGAAGAAGCAAGAGGGGAA +
Preference number: 2 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHPDCPG*EEARGE
Trigger: TTCCCCTCTTGCTTCTTCTCACCCAGGACAATCGGG...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR GCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACATTCCCGTACGTTTaGTGGAAGGATGGCATGTCA +
Preference number: 2 (lower is better)
Translates to: WSSQTSMHVWASHRNFITTFPYV*WKDGMS
Trigger: TGACATGCCATCCTTCCAGCAAACGTACGGGAATGT...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR GCA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGTTGGCATATTGCACATaGTGTGATGAAGGATGCACT +
Preference number: 2 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLLAYCT*CDEGCT
Trigger: AGTGCATCCTTCATCACAGCATGTGCAATATGCCAA...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR GCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCCAACCCCAAATCCATaGAAGAACACAAAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFPTPNP*KNTKPR
Trigger: CCTTGGCTTTGTGTTCTTGCATGGATTTGGGGTTGG...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR-3UTR GCA 90 bp TGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCATCTGCTTCTCCGTTTCCTaGCCCGTTTGGGGTAGCCAT +
Preference number: 2 (lower is better)
Translates to: CKTHIGFCLRLILDIGGICFSVS*PVWGSH
Trigger: ATGGCTACCCCAAACGGGGCAGGAAACGGAGAAGCA...GATGCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTCAGGACGTATGGTGTTaGGTAAATCCGGGAGGACAT +
Preference number: 2 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLQDVWC*VNPGGH
Trigger: ATGTCCTCCCGGATTTACCCAACACCATACGTCCTG...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR CCA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTCCTTCCCGATTGTCCTaGGTGAGAAGAAGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: LDIGGISFVCASPFPAPFPSRLS*VRRSKR
Trigger: CCTCTTGCTTCTTCTCACCCAGGACAATCGGGAAGG...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR TCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCAGAAAGTGGTTGTTTTaGACTAGGGTAGTCACCTGT +
Preference number: 2 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSRKWLF*TRVVTC
Trigger: ACAGGTGACTACCCTAGTTCAAAACAACCACTTTCT...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR TCA 90 bp TGTAACATGTCCCTGGACCACAGATTCCAGGAGTCTCACATTCATTCACATCATATCCTCCTGGTGCATTaGGGCACTGGCCATTGCCAC +
Preference number: 2 (lower is better)
Translates to: CNMSLDHRFQESHIHSHHILLVH*GTGHCH
Trigger: GTGGCAATGGCCAGTGCCTCAATGCACCAGGAGGAT...ATGATGTGAATGAATGTGAGACTCCTGGAATCTGTGGTCCAGGGACATGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR TCA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCTTTCGGCAAACATCGTaGATAACCTTGCATTCATCG +
Preference number: 2 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHAFRQTS*ITLHSS
Trigger: CGATGAATGCAAGGTTATTCACGATGTTTGCCGAAA...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGCATCCATTTCACCACTaGCAGGTGGCTCTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: CLRLILDIGGISFVCASPHPFHH*QVALGF
Trigger: GAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATG...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTAGCCTCTGGGGAGAGTaGATTGTCATCCATTTCACC +
Preference number: 2 (lower is better)
Translates to: LDIGGISFVCASPFPAPFSLWGE*IVIHFT
Trigger: GGTGAAATGGATGACAATTCACTCTCCCCAGAGGCT...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR GCA 90 bp ACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCATTCCAGAAACACAGTGGTTGTGTTGCTTGGTTaGACACTCATCAAGATCTTT +
Preference number: 2 (lower is better)
Translates to: TDRWLWVSSAHAHSRNTVVVLLG*TLIKIF
Trigger: AAAGATCTTGATGAGTGTGCAACCAAGCAACACAAC...CACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAATGGCCAACCCCCAATaGAAATACACGTCCCAGTTT +
Preference number: 2 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGMANPQ*KYTSQF
Trigger: AAACTGGGACGTGTATTTCCATTGGGGGTTGGCCAT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR CCA 90 bp TCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTATGGCCAACCCCCAATaGAAATACACGTCCCAGTTT +
Preference number: 2 (lower is better)
Translates to: SSILEASVSFVLLRFLPRMANPQ*KYTSQF
Trigger: AAACTGGGACGTGTATTTCCATTGGGGGTTGGCCAT...ACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR CCA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCGTTGGACAGCGGCACTaGAAACTCCCAAAGGTGTTG +
Preference number: 2 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFVGQRH*KLPKVL
Trigger: CAACACCTTTGGGAGTTTCCAGTGCCGCTGTCCAAC...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CCA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCATTTTCACAGACCCCTaGGATCTCCCGGCACTCATC +
Preference number: 2 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFIFTDP*DLPALI
Trigger: GATGAGTGCCGGGAGATCCCAGGGGTCTGTGAAAAT...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR TCA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCAGCTGCCTGCAGTGTTaGTGCATTCGGCGTTGCGCT +
Preference number: 2 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRSCLQC*CIRRCA
Trigger: AGCGCAACGCCGAATGCATCAACACTGCAGGCAGCT...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR TCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATCGCAGATGTGAGCGCTaGGGCATTCGTTTTCATCAA +
Preference number: 2 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHRRCER*GIRFHQ
Trigger: TTGATGAAAACGAATGCCTCAGCGCTCACATCTGCG...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR TCA 90 bp TCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTGTTTGGGGTAGCCATTaGTCTTACACTCGTAACAAG +
Preference number: 2 (lower is better)
Translates to: SSILEASVSFVLLRFLPRVWGSH*SYTRNK
Trigger: CTTGTTACGAGTGTAAGATCAATGGCTACCCCAAAC...ACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp TCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTCACCCAGTTCACCACTaGGGTAGTCTTTGTCATATT +
Preference number: 2 (lower is better)
Translates to: SSILEASVSFVLLRFLPRHPVHH*GSLCHI
Trigger: AATATGACAAAGACTACCTCAGTGGTGAACTGGGTG...ACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR TCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATTTTGTAGCACCTCTGTaGAGCAGTACCCTTCCCGAT +
Preference number: 2 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHFVAPL*SSTLPD
Trigger: ATCGGGAAGGGTACTGCTTCACAGAGGTGCTACAAA...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR GCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGATTCACTACCACGAAATaGTTTCCTGCCCTTAGGGAT +
Preference number: 2 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGFTTTK*FPALRD
Trigger: ATCCCTAAGGGCAGGAAAGCATTTCGTGGTAGTGAA...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR-3UTR GCA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCGCCCCCAGGAGGTCTTaGCAAGGAGTCTTCCACAGG +
Preference number: 2 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFAPRRS*QGVFHR
Trigger: CCTGTGGAAGACTCCTTGGCAAGACCTCCTGGGGGC...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR GCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGCTAGCACCTCTAAGGTaGCCCCAGGAGGTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKELAPLR*PQEVLP
Trigger: TGGCAAGACCTCCTGGGGGCACCTTAGAGGTGCTAG...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR GCA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGACTCATCAAGATCTTTaGAGCTCCTTCCATCCTCTT +
Preference number: 2 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVTHQDL*SSFHPL
Trigger: AAGAGGATGGAAGGAGCTGCAAAGATCTTGATGAGT...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR GCA 90 bp TACCCTCACACTCGTCCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAATTCATTGTTATCAATaGAGGACGTATGGTGTTGGG +
Preference number: 2 (lower is better)
Translates to: YPHTRPRLHSWSRSDQVRIHCYQ*RTYGVG
Trigger: CCCAACACCATACGTCCTGCATTGATAACAATGAAT...TCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGACGAGTGTGAGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR GCA 90 bp GCGCCCATTCTCACAGATCCCTGGCTTCGTCTGACATTCATTCTCATCTACACAACAGGCAACCGCTTTTaGTGTGATTGCCTCCAAATG +
Preference number: 2 (lower is better)
Translates to: APILTDPWLRLTFILIYTTGNRF*CDCLQM
Trigger: CATTTGGAGGCAATCACAGCAAAAGCGGTTGCCTGT...TGTGTAGATGAGAATGAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR CCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAGCATGTCAGCATAAATaGCCAACCCCCAATGGAAAT +
Preference number: 2 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGACQHK*PTPNGN
Trigger: ATTTCCATTGGGGGTTGGCCATTTATGCTGACATGC...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGCGTTTGCTGGAAGGATaGCATGTCAGCATAAATGGC +
Preference number: 2 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLRLLEG*HVSING
Trigger: GCCATTTATGCTGACATGCCATCCTTCCAGCAAACG...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR CCA 90 bp TTCACATGTCATCATTGGACCGGGCTCAAATCCCTCCTCGCAGGTGCATTCAAACAGGGCACAAATTTCTaGCTCTTCGACACACTCATC +
Preference number: 2 (lower is better)
Translates to: FTCHHWTGLKSLLAGAFKQGTNF*LFDTLI
Trigger: GATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTG...TTTGAATGCACCTGCGAGGAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CCA 90 bp TGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTGAGAATCCCCGCTaGCATTCACAGGTGAAGCTT +
Preference number: 2 (lower is better)
Translates to: CKTHIGFCLRLILDIGGISENPR*HSQVKL
Trigger: AAGCTTCACCTGTGAATGCCAGCGGGGATTCTCACT...GATGCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGTTGCAAGACTCACATTaGCTTCTGTCTCAGACTGAT +
Preference number: 2 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMLQDSH*LLSQTD
Trigger: ATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCAA...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCGCACATTCATTTATATaGATGGACACTTTTCAGATG +
Preference number: 2 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRAHSFI*MDTFQM
Trigger: CATCTGAAAAGTGTCCATCCATATAAATGAATGTGC...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR CAA 90 bp AAGCTTCCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATaGATGTCAGAGGTGCATTCATTGTTATCAATGCAGGACGTATGG +
Preference number: 2 (lower is better)
Translates to: KLPGVFWQMPLDPHR*MSEVHSLLSMQDVW
Trigger: CCATACGTCCTGCATTGATAACAATGAATGCACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGGAAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCGAAAGGATGAAACCATaGTTGCAGCGGCAGTTGAAG +
Preference number: 2 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFERMKP*LQRQLK
Trigger: CTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTC...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR TCA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCTGTTGTGAGAAAGGATaGAACCATGATTGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFCCEKG*NHDCSG
Trigger: GCCGCTGCAATCATGGTTTCATCCTTTCTCACAACA...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR TCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATGTCCATATCAACTGCTaGATCATCAGGTCCCACGAT +
Preference number: 2 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHVHINC*IIRSHD
Trigger: ATCGTGGGACCTGATGATTCAGCAGTTGATATGGAC...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR TCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTTTTCGGCAAACATCGTaGATAACCTTGCATTCATCG +
Preference number: 2 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGFRQTS*ITLHSS
Trigger: CGATGAATGCAAGGTTATTCACGATGTTTGCCGAAA...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp CTCGTCCTGGTTGGGGCTGGCGGTAAACCCATCATTACACTCACAGGTGTAGCTACAAATGCAATGATATaGTCCTCTGTCATTGACACA +
Preference number: 2 (lower is better)
Translates to: LVLVGAGGKPIITLTGVATNAMI*SSVIDT
Trigger: TGTGTCAATGACAGAGGATCATATCATTGCATTTGT...AGCTACACCTGTGAGTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR TCA 90 bp CTCGTCCTGGTTGGGGCTGGCGGTAAACCCATCATTACACTCACAGGTGTAGCTACATATATGTGCCAATaGGGTTCTTGCATTCCATTT +
Preference number: 2 (lower is better)
Translates to: LVLVGAGGKPIITLTGVATYMCQ*GSCIPF
Trigger: AAATGGAATGCAAGAACCTCATTGGCACATATATGT...AGCTACACCTGTGAGTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR CCA 90 bp TTCACATGTCATCATTGGACCGGGCTCAAATCCCTCCTCGCAGGTGCATTCAAAAGCAGCATTCCTGCTTaGAGTGATTTCTGGATTTGG +
Preference number: 2 (lower is better)
Translates to: FTCHHWTGLKSLLAGAFKSSIPA*SDFWIW
Trigger: CCAAATCCAGAAATCACTCCAAGCAGGAATGCTGCT...TTTGAATGCACCTGCGAGGAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTCATTCATTGATGTCTTaGCATCCTCCACTGAACTGT +
Preference number: 2 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGHSLMS*HPPLNC
Trigger: ACAGTTCAGTGGAGGATGCCAAGACATCAATGAATG...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp TCATTGATGTCTTGGCATCCTCCACTGAACTGTTCATACTGGAAGCCGGCGGGAATTCTCACAGATCCCTaGCTTCGTCTGACATTCATT +
Preference number: 2 (lower is better)
Translates to: SLMSWHPPLNCSYWKPAGILTDP*LRLTFI
Trigger: AATGAATGTCAGACGAAGCCAGGGATCTGTGAGAAT...TCCCGCCGGCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAGACATCAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR TCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCAAGAATCAACACATATaGCAAGGTAGCTTAGCTACA +
Preference number: 2 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSKNQHI*QGSLAT
Trigger: TGTAGCTAAGCTACCTTGTCATATGTGTTGATTCTT...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR TCA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGAAGAATCAACACATATaGCAAGGTAGCTTAGCTACA +
Preference number: 2 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMKNQHI*QGSLAT
Trigger: TGTAGCTAAGCTACCTTGTCATATGTGTTGATTCTT...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR TCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATCTAGAAGACATTCATTaGTATCCACACAGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHLEDIH*YPHRSS
Trigger: GGAGGACCTGTGTGGATATCAATGAATGTCTTCTAG...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR TCA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCCATCAGGTCCCACGATaGTCCCACTTCCATAAGGAC +
Preference number: 2 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRHQVPR*SHFHKD
Trigger: GTCCTTATGGAAGTGGGATCATCGTGGGACCTGATG...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR TCA 90 bp CACTTCATAAACTGTGCATCTCCAATCAGAATGGTAAACAGGTTTCACTGTAGTGGTGGGTGGATCGCTTaGGGCCAAGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: HFINCASPIRMVNRFHCSGGWIA*GQEFET
Trigger: GGTCTCAAACTCTTGGCCTCAAGCGATCCACCCACC...ACTACAGTGAAACCTGTTTACCATTCTGATTGGAGATGCACAGTTTATGAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR TCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTACAAATGCAATGATATaGTCCTCTGTCATTGACACA +
Preference number: 2 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFTNAMI*SSVIDT
Trigger: TGTGTCAATGACAGAGGATCATATCATTGCATTTGT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR GCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTCCTCCCAGACCTCTATaGACGTGTGGGCCAGTCACC +
Preference number: 2 (lower is better)
Translates to: NKSLVLISTITNPHIKGIPPRPL*TCGPVT
Trigger: GGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR GCA 90 bp GACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCAATGGTAATCTTGGCATATTaGACATGCTGTGATGAAGGA +
Preference number: 2 (lower is better)
Translates to: DVWCWVNPGGHLHVKPPMVILAY*TCCDEG
Trigger: TCCTTCATCACAGCATGTGCAATATGCCAAGATTAC...CATTGGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR GCA 90 bp AGAAAGGATGAAACCATGATTGCAGCGGCAGTTGAAGGAACCAATTGTGTTCCGATTCATTCACATCTGTaGAGTTCCCGCCGCTTCTGT +
Preference number: 2 (lower is better)
Translates to: RKDETMIAAAVEGTNCVPIHSHL*SSRRFC
Trigger: ACAGAAGCGGCGGGAACTGCACAGATGTGAATGAAT...CGGAACACAATTGGTTCCTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR GCA 90 bp TTCACATGTCATCATTGGACCGGGCTCAAATCCCTCCTCGCAGGTGCATTCAAACAACTCCAATTTCATTaGTGCAGGCTGTATCTCCAT +
Preference number: 2 (lower is better)
Translates to: FTCHHWTGLKSLLAGAFKQLQFH*CRLYLH
Trigger: ATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTG...TTTGAATGCACCTGCGAGGAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR GCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATTTCCAACTGTGTCAATaGACTGCCCATGACTGCATA +
Preference number: 2 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHFQLCQ*TAHDCI
Trigger: TATGCAGTCATGGGCAGTGCATTGACACAGTTGGAA...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR GCA 90 bp AATAAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCCAGCAGCCTTACTGCTaGAGTGAAACGGAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: NKHLLSDQGQVYHDKQTSQQPYC*SETESP
Trigger: GGGGCTCTCCGTTTCACTGCAGCAGTAAGGCTGCTG...GGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR GCA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCCCACAGCAGCCTTACTaGTGCAGTGAAACGGAGAGC +
Preference number: 2 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFPQQPY*CSETES
Trigger: GCTCTCCGTTTCACTGCAGCAGTAAGGCTGCTGTGG...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR GCA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCACCCAGTTTTACAAATaGAATGATATGATCCTCTGT +
Preference number: 2 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHATQFYK*NDMILC
Trigger: ACAGAGGATCATATCATTGCATTTGTAAAACTGGGT...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR GCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTGTTGTGTTGCTTGGTTaGACACTCATCAAGATCTTT +
Preference number: 2 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGVVLLG*TLIKIF
Trigger: AAAGATCTTGATGAGTGTGCAACCAAGCAACACAAC...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR GCA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGAACTGGCAGTTGTGTTaGTTGGTTGCACACTCATCA +
Preference number: 2 (lower is better)
Translates to: CLRLILDIGGISFVCASPNWQLC*LVAHSS
Trigger: TGATGAGTGTGCAACCAAGCAACACAACTGCCAGTT...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR GCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTATTCATTGTTATCAATaGAGGACGTATGGTGTTGGG +
Preference number: 2 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGIHCYQ*RTYGVG
Trigger: CCCAACACCATACGTCCTGCATTGATAACAATGAAT...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTCTCTGCTACTTTCAATaGATAAAACAAGGGATCGAC +
Preference number: 2 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLLCYFQ*IKQGID
Trigger: GTCGATCCCTTGTTTTATCCATTGAAAGTAGCAGAG...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR-3UTR CCA 90 bp TTCACATGTCATCATTGGACCGGGCTCAAATCCCTCCTCGCAGGTGCATTCAAAAAACTCATCTGTACTTaGGATGGGACACTGTTCACA +
Preference number: 2 (lower is better)
Translates to: FTCHHWTGLKSLLAGAFKKLICT*DGTLFT
Trigger: TGTGAACAGTGTCCCATCCCAAGTACAGATGAGTTT...TTTGAATGCACCTGCGAGGAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATATGAATCCTCGGCCATaGGGACAGAGTTTCTTGAAA +
Preference number: 2 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHMNPRP*GQSFLK
Trigger: TTTCAAGAAACTCTGTCCCCATGGCCGAGGATTCAT...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR TCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTCCCTTTGTAATTAGATaGGCATTGACTAACGAAAGA +
Preference number: 2 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLPFVIR*ALTNER
Trigger: TCTTTCGTTAGTCAATGCTCATCTAATTACAAAGGG...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR-3UTR TCA 90 bp CAGATCTTCAGCCACAGAATTAAATCCCCACGTCCTTTATATACAGGAGCAATCGGCATGGGAAGCCAGTaGAATGGTCAGTTGCATGTA +
Preference number: 2 (lower is better)
Translates to: QIFSHRIKSPRPLYTGAIGMGSQ*NGQLHV
Trigger: TACATGCAACTGACCATTTCACTGGCTTCCCATGCC...GATTGCTCCTGTATATAAAGGACGTGGGGATTTAATTCTGTGGCTGAAGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR GCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGTCGCCTCCCAAAATCTaGCTCAACAATGGCCCAAGA +
Preference number: 2 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKESPPKI*LNNGPR
Trigger: TCTTGGGCCATTGTTGAGGCAGATTTTGGGAGGCGA...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAGCACTGGTGATCCTCTaGCCACTGAGGCTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKALVIL*PLRLFP
Trigger: AGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGC...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR-3UTR CCA 90 bp TGTAGGACCCATCCAAGTTTTGACAGGTACCTGGTGCACATTTTCTGGGTTCTACACTTGCATGTAGTCTaGAGGACAGATACAGGTGTA +
Preference number: 2 (lower is better)
Translates to: CRTHPSFDRYLVHIFWVLHLHVV*RTDTGV
Trigger: TACACCTGTATCTGTCCTCCAGACTACATGCAAGTG...TAGAACCCAGAAAATGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CCA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCACTGGATCTTGAAACTTaGGAGACCCACACCAAAGGA +
Preference number: 2 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPLDLET*ETHTKG
Trigger: TCCTTTGGTGTGGGTCTCCCAAGTTTCAAGATCCAG...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGAGTCCCAGTTATATCTaGAGTGTACCCAGTTTTACA +
Preference number: 2 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLSPSYI*SVPSFT
Trigger: TGTAAAACTGGGTACACTCCAGATATAACTGGGACT...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR TCA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCAAGAAAGTGGTTGTTTTaGACTAGGGTAGTCACCTGT +
Preference number: 2 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPRKWLF*TRVVTC
Trigger: ACAGGTGACTACCCTAGTTCAAAACAACCACTTTCT...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR TCA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCAGATAAAAGGGGTCACTaGCAGTCCATCCTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPDKRGH*QSILLF
Trigger: AAACAACAGGATGGACTGTCAGTGACCCCTTTTATC...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR GCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAATGCTGTGATGAAGGATaGACTGGTGATCCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKCCDEG*TGDPLA
Trigger: GGCCAGAGGATCACCAGTGCATCCTTCATCACAGCA...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR-3UTR GCA 90 bp TGTAGGACCCATCCAAGTTTTGACAGGTACCTGGTGCACATTTTCTGGGTTCTACTCCAATTTCATTGCTaGAGGCTGTATCTCCATTGT +
Preference number: 2 (lower is better)
Translates to: CRTHPSFDRYLVHIFWVLLQFHC*RLYLHC
Trigger: ACAATGGAGATACAGCCTGCAGCAATGAAATTGGAG...TAGAACCCAGAAAATGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR GCA 90 bp AATAAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCCAGGGAGAGTCATCCTaGCCGTTGTTCTGGATCTTG +
Preference number: 2 (lower is better)
Translates to: NKHLLSDQGQVYHDKQTSQGESS*PLFWIL
Trigger: CAAGATCCAGAACAACGGGCAGGATGACTCTCCCTG...GGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CCA 90 bp AAAGAATTTTGTACTCGGATGTGTTCACAGCAGGACACATCTCACAAGGAGTACACTGATGCACGTGGTTaGATCCAGGCATTCATTCAC +
Preference number: 2 (lower is better)
Translates to: KEFCTRMCSQQDTSHKEYTDARG*IQAFIH
Trigger: GTGAATGAATGCCTGGATCCAACCACGTGCATCAGT...GTACTCCTTGTGAGATGTGTCCTGCTGTGAACACATCCGAGTACAAAATTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CCA 90 bp GCACTGTCCATGTTTACAGACATCGGGTTCTTTGCATTCGTCCATATCAACTGCAGCAGCAGGAAGCTTTaGAAACACCAACTCCAATTT +
Preference number: 2 (lower is better)
Translates to: ALSMFTDIGFFAFVHINCSSRKL*KHQLQF
Trigger: AAATTGGAGTTGGTGTTTCCAAAGCTTCCTGCTGCT...GCAGTTGATATGGACGAATGCAAAGAACCCGATGTCTGTAAACATGGACAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGTCCTGCCCGTTGTTCTaGATCTTGAAACTTGGGAGA +
Preference number: 2 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKESCPLF*ILKLGR
Trigger: TCTCCCAAGTTTCAAGATCCAGAACAACGGGCAGGA...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CCA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTTCTGTAACAGCGGCATaGGAAGCCAGTGAAATGGTC +
Preference number: 2 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRISVTAA*EASEMV
Trigger: GACCATTTCACTGGCTTCCCATGCCGCTGTTACAGA...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CCA 90 bp TGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTCCCAGTTATATCTaGAGTGTACCCAGTTTTACA +
Preference number: 2 (lower is better)
Translates to: CKTHIGFCLRLILDIGGISPSYI*SVPSFT
Trigger: TGTAAAACTGGGTACACTCCAGATATAACTGGGACT...GATGCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CCA 90 bp TGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCATCTTAACACATAGGAACTaGCAGTTGTGTTGCTTGGTT +
Preference number: 2 (lower is better)
Translates to: CKTHIGFCLRLILDIGGILTHRN*QLCCLV
Trigger: AACCAAGCAACACAACTGCCAGTTCCTATGTGTTAA...GATGCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR CAA 90 bp GGAAGGAGTTCTAGGATTCGAACCTTGTTACTGACGTGGGAAATATaGAAAGCAAAGATGGCTGTCTTCTCAACATCCCAACTTGCAAGA +
Preference number: 2 (lower is better)
Translates to: GRSSRIRTLLLTWEI*KAKMAVFSTSQLAR
Trigger: TCTTGCAAGTTGGGATGTTGAGAAGACAGCCATCTTTGCTTTCAATATTTCCCACGTCAGTAACAAGGTTCGAATCCTAGAACTCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR CAA 90 bp TTCGTCAGAGTTGTAAGAGCTGGAAGGAGTTCTAGGATTCGAACCTaGTTACTGACGTGGGAAATATTGAAAGCAAAGATGGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: FVRVVRAGRSSRIRT*LLTWEILKAKMAVF
Trigger: GAAGACAGCCATCTTTGCTTTCAATATTTCCCACGTCAGTAACAAGGTTCGAATCCTAGAACTCCTTCCAGCTCTTACAACTCTGACGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR TCA 90 bp CATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCTGGAGGACAGATAACTCCCAAAGGTGTTaGTACATTTTCCTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: HIHAIISPIHLHVVWRTDNSQRC*YIFLLG
Trigger: GCCAAGGAGGAAAATGTATCAACACCTTTGGGAGTT...ATCTGTCCTCCAGACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR TCA 90 bp AATAAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCCGTTGTTCTGGATCTTaGAACTTGGGAGACCCACAC +
Preference number: 2 (lower is better)
Translates to: NKHLLSDQGQVYHDKQTSRCSGS*NLGDPH
Trigger: GTGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACG...GGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR TCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGCAGCATCTACCAAGATaGCCCCAAGGAAAGTACTTT +
Preference number: 2 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKEQHLPR*PQGKYF
Trigger: AAAGTACTTTCCTTGGGGTCATCTTGGTAGATGCTG...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR GCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGCCACTTGCCCTGTTCTaGTTCCAATGTAGACATCTA +
Preference number: 2 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKEPLALF*FQCRHL
Trigger: TAGATGTCTACATTGGAAGCAGAACAGGGCAAGTGG...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR TCA 90 bp AGAAAGGATGAAACCATGATTGCAGCGGCAGTTGAAGGAACCAATTGTGTTCCGTCTTCTTGGTCATGTTaGATAACAATTCTCCATCAC +
Preference number: 2 (lower is better)
Translates to: RKDETMIAAAVEGTNCVPSSWSC*ITILHH
Trigger: GTGATGGAGAATTGTTATTCAACATGACCAAGAAGA...CGGAACACAATTGGTTCCTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR TCA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCAGGAACCATCTGTATTaGTGCACTGTCCATGTTTAC +
Preference number: 2 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRRNHLY*CTVHVY
Trigger: GTAAACATGGACAGTGCATCAATACAGATGGTTCCT...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR GCA 90 bp CAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAGCTCCTTCCATCCACCCAGTTTTACAAATaGAATGATATGATCCTCTGT +
Preference number: 2 (lower is better)
Translates to: QLCCLVAHSSRSLQLLPSTQFYK*NDMILC
Trigger: ACAGAGGATCATATCATTGCATTTGTAAAACTGGGT...GGATGGAAGGAGCTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR GCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATTGGACACTTTTCAGATaGTTATATATTACAGGCAAC +
Preference number: 2 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHWTLFR*LYITGN
Trigger: GTTGCCTGTAATATATAAGCATCTGAAAAGTGTCCA...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR CCA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCGGGAAGCCAGTGAAATaGTCAGTTGCATGTACACAA +
Preference number: 2 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFGKPVK*SVACTQ
Trigger: TTGTGTACATGCAACTGACCATTTCACTGGCTTCCC...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CCA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTAGCCACATATCCAAGTaGATACCATCACTTGGTGAC +
Preference number: 2 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRISHISK*IPSLGD
Trigger: GTCACCAAGTGATGGTATCCACTTGGATATGTGGCT...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGATCCCTTCCTTTTaGTTGATTTTAAAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPLIPSF*LILKKP
Trigger: TGGCTTCTTTAAAATCAACCAAAAGGAAGGGATCAG...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR CAA 90 bp GACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTaGGTGTATACATTTAACAAGTCTTTGGTCTTAATAAGCACCATT +
Preference number: 2 (lower is better)
Translates to: DLYARVGQSPKFHYH*VYTFNKSLVLISTI
Trigger: AATGGTGCTTATTAAGACCAAAGACTTGTTAAATGTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR CAA 90 bp TCCACAGATGCACATATATGTGCCAATGAGGTTCTTGCATTCCATTaGTTTTTCAGTACAGTCATGTTTTCCCTCTTCACACTCATCCTC +
Preference number: 2 (lower is better)
Translates to: STDAHICANEVLAFH*FFSTVMFSLFTLIL
Trigger: GAGGATGAGTGTGAAGAGGGAAAACATGACTGTACTGAAAAACAAATGGAATGCAAGAACCTCATTGGCACATATATGTGCATCTGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR GCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTACATTCCCGTACGTTTaGTGGAAGGATGGCATGTCA +
Preference number: 2 (lower is better)
Translates to: NKSLVLISTITNPHIKGITFPYV*WKDGMS
Trigger: TGACATGCCATCCTTCCAGCAAACGTACGGGAATGT...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR CCA 90 bp CGTTCTGACACTCGTCAATATCTTCACAAACCAACAACTTGTCATTATAGAAGAGTTGTAACATGTCCCTaGACCACAGATTCCAGGAGT +
Preference number: 2 (lower is better)
Translates to: RSDTRQYLHKPTTCHYRRVVTCP*TTDSRS
Trigger: ACTCCTGGAATCTGTGGTCCAGGGACATGTTACAAC...TCTTCTATAATGACAAGTTGTTGGTTTGTGAAGATATTGACGAGTGTCAGAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR CAA 90 bp AAGAAGAGATTGTTTTATTGTGACATTTATGACATTGACCCCTTGTaGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTG +
Preference number: 2 (lower is better)
Translates to: KKRLFYCDIYDIDPL*TGMTEGNLGILHML
Trigger: CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTCAATGTCATAAATGTCACAATAAAACAATCTCTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR GCA 90 bp CAGATCTTCAGCCACAGAATTAAATCCCCACGTCCTTTATATACAGGAGCAATCAGTGAAATGGTCAGTTaGATGTACACAACACAAACA +
Preference number: 2 (lower is better)
Translates to: QIFSHRIKSPRPLYTGAISEMVS*MYTTQT
Trigger: TGTTTGTGTTGTGTACATGCAACTGACCATTTCACT...GATTGCTCCTGTATATAAAGGACGTGGGGATTTAATTCTGTGGCTGAAGATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTGCATGTCAGCATAAATaGCCAACCCCCAATGGAAAT +
Preference number: 2 (lower is better)
Translates to: NKSLVLISTITNPHIKGIACQHK*PTPNGN
Trigger: ATTTCCATTGGGGGTTGGCCATTTATGCTGACATGC...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR CCA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTAATCTGCCTCAACAATaGCCCAAGATTCCATTTAAC +
Preference number: 2 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRINLPQQ*PKIPFN
Trigger: GTTAAATGGAATCTTGGGCCATTGTTGAGGCAGATT...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CCA 90 bp CAGATCTTCAGCCACAGAATTAAATCCCCACGTCCTTTATATACAGGAGCAATCCTAGGAGTCAAAAACTaGTCTGGTGAGTTTACTTTT +
Preference number: 2 (lower is better)
Translates to: QIFSHRIKSPRPLYTGAILGVKN*SGEFTF
Trigger: AAAAGTAAACTCACCAGACCAGTTTTTGACTCCTAG...GATTGCTCCTGTATATAAAGGACGTGGGGATTTAATTCTGTGGCTGAAGATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR TCA 90 bp AATAAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCAGAAACAACCAGAATTaGTATTGCAGGGAAAGGAAC +
Preference number: 2 (lower is better)
Translates to: NKHLLSDQGQVYHDKQTSRNNQN*YCRERN
Trigger: GTTCCTTTCCCTGCAATATCAATTCTGGTTGTTTCT...GGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR GCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGCGCCCACCACCTTCATaGCATCTTATTTCCTCTTAT +
Preference number: 2 (lower is better)
Translates to: ESEIERSQTIERYRFKSQRPPPS*HLISSY
Trigger: ATAAGAGGAAATAAGATGGCATGAAGGTGGTGGGCG...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR-3UTR GCA 90 bp CACTTCATAAACTGTGCATCTCCAATCAGAATGGTAAACAGGTTTCACTGTAGTTTATCACAGCCTAAGTaGTTGGCTCATACAATCATC +
Preference number: 2 (lower is better)
Translates to: HFINCASPIRMVNRFHCSLSQPK*LAHTII
Trigger: GATGATTGTATGAGCCAAGCACTTAGGCTGTGATAA...ACTACAGTGAAACCTGTTTACCATTCTGATTGGAGATGCACAGTTTATGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CCA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCACATTATCGGAATTCTaGGTTTATTTTCCACGAAGG +
Preference number: 2 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFTLSEF*VYFPRR
Trigger: CCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR TCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGCTCTTCAAAGATTTTTaGGAGCACTTTCCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: ESEIERSQTIERYRFKSQLFKDF*EHFPVS
Trigger: GGACACAGGAAAGTGCTCTCAAAAATCTTTGAAGAG...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR CAA 90 bp TTAATCATAACTATTTTCTGTGCTATTTTATCACAGCCTAAGTGCTaGGCTCATACAATCATCTTGTCCTTACTCCAGACTAGGAGTCAA +
Preference number: 2 (lower is better)
Translates to: LIITIFCAILSQPKC*AHTIILSLLQTRSQ
Trigger: TTGACTCCTAGTCTGGAGTAAGGACAAGATGATTGTATGAGCCAAGCACTTAGGCTGTGATAAAATAGCACAGAAAATAGTTATGATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR GCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGGTAATCTTGGCATATTaGACATGCTGTGATGAAGGA +
Preference number: 2 (lower is better)
Translates to: ESEIERSQTIERYRFKSQVILAY*TCCDEG
Trigger: TCCTTCATCACAGCATGTGCAATATGCCAAGATTAC...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR-3UTR GCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAAATGACACCAGACTCTaGTACTTTCAATGGATAAAA +
Preference number: 2 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKNDTRL*YFQWIK
Trigger: TTTTATCCATTGAAAGTAGCAGAGTCTGGTGTCATT...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR CAA 90 bp TCACCGAAATTTCATTACCACTTGGTGTATACATTTAACAAGTCTTaGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATT +
Preference number: 2 (lower is better)
Translates to: SPKFHYHLVYTFNKS*VLISTITNPHIKGI
Trigger: AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTTAAATGTATACACCAAGTGGTAATGAAATTTCGGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR CCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGAAAAGTTACAGCAATTaGATACAGTCTGGGATTATC +
Preference number: 2 (lower is better)
Translates to: ESEIERSQTIERYRFKSQKSYSN*IQSGII
Trigger: GATAATCCCAGACTGTATCCAATTGCTGTAACTTTT...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR CCA 72 bp CAGGTGGACAGCCACACAGGTAACCGCCCTCGGTATTaGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGC +
Preference number: 3 (lower is better)
Translates to: QVDSHTGNRPRY*NSHSCRGPAQS
Trigger: GCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCAGTACCCTTCCCGATaGTCCTGGGTGAGAAGAAGC +
Preference number: 3 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGQYPSR*SWVRRS
Trigger: GCTTCTTCTCACCCAGGACAATCGGGAAGGGTACTG...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR CAA 90 bp GTTCCCGCCGCTTCTGTCCAGTTCGTAGCCTATCTCACACTCACAGCGGAACAGTATCCTCCTGGTGCATaGAGGCACTGGCCATTGCCA +
Preference number: 3 (lower is better)
Translates to: VPAASVQFVAYLTLTAEQYPPGA*RHWPLP
Trigger: TGGCAATGGCCAGTGCCTCAATGCACCAGGAGGATA...CTGTTCCGCTGTGAGTGTGAGATAGGCTACGAACTGGACAGAAGCGGCGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp TTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTAATCCGGGAGGACATTaGCATGTGAAGCCGCCAATG +
Preference number: 3 (lower is better)
Translates to: LAYAEVTRWTATQVTALGNPGGH*HVKPPM
Trigger: CATTGGCGGCTTCACATGCAAATGTCCTCCCGGATT...ACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp TTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTAGAAACACAGTGCCCTaGGCCTATGCGGAAGTAACC +
Preference number: 3 (lower is better)
Translates to: LAYAEVTRWTATQVTALGRNTVP*AYAEVT
Trigger: GGTTACTTCCGCATAGGCCAAGGGCACTGTGTTTCT...ACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR TCA 72 bp GTCCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTaGGAATCCCCGCTGGCATTCACAGGTGAAGCTTCC +
Preference number: 3 (lower is better)
Translates to: VHVFTAGAGLIK*ESPLAFTGEAS
Trigger: GGAAGCTTCACCTGTGAATGCCAGCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR TCA 72 bp TCACACTCGTCCACGTCTTCACAGCTGGAGCCGGTCTaGTCAAGTGAGAATCCCCGCTGGCATTCACAGGTG +
Preference number: 3 (lower is better)
Translates to: SHSSTSSQLEPV*SSENPRWHSQV
Trigger: CACCTGTGAATGCCAGCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGACGAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR CCA 72 bp GCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTaGCCACTGAGGCTGTTTCCTGGTCCTCCCAGACCT +
Preference number: 3 (lower is better)
Translates to: AHAVMKDALVIL*PLRLFPGPPRP
Trigger: AGGTCTGGGAGGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR CCA 72 bp AACACAGTGCCCTTGGCCTATGCGGAAGTAACCAGGTaGACAGCCACACAGGTAACCGCCCTCGGTATTGGA +
Preference number: 3 (lower is better)
Translates to: NTVPLAYAEVTR*TATQVTALGIG
Trigger: TCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGATAAAATTGCAGGGTTaGGGAGCCTGGTTGCACTCG +
Preference number: 3 (lower is better)
Translates to: WTATQVTALGIGTAIAAGIKLQG*GAWLHS
Trigger: CGAGTGCAACCAGGCTCCCAAACCCTGCAATTTTAT...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCATAGGAACTGGCAGTaGTGTTGCTTGGTTGCACAC +
Preference number: 3 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRHRNWQ*CCLVAH
Trigger: GTGTGCAACCAAGCAACACAACTGCCAGTTCCTATG...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp TTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTCATAGGAACTGGCAGTaGTGTTGCTTGGTTGCACAC +
Preference number: 3 (lower is better)
Translates to: LAYAEVTRWTATQVTALGHRNWQ*CCLVAH
Trigger: GTGTGCAACCAAGCAACACAACTGCCAGTTCCTATG...ACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCGCAGGACGTATGGTGTaGGGTAAATCCGGGAGGACA +
Preference number: 3 (lower is better)
Translates to: AGRMVLGKSGRTFACEAAAGRMV*GKSGRT
Trigger: TGTCCTCCCGGATTTACCCAACACCATACGTCCTGC...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGACATTCATTGATGTCTaGGCATCCTCCACTGAACTG +
Preference number: 3 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLTFIDV*ASSTEL
Trigger: CAGTTCAGTGGAGGATGCCAAGACATCAATGAATGT...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR TCA 72 bp CACAGGGAGAGTCATCCTGCCCGTTGTTCTGGATCTTaGAACTTGGGAGACCCACACCAAAGGAGGGAACCG +
Preference number: 3 (lower is better)
Translates to: HRESHPARCSGS*NLGDPHQRREP
Trigger: CGGTTCCCTCCTTTGGTGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACGGGCAGGATGACTCTCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR CCA 72 bp CAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTaGCATCCTCCACTGAACTGTTCATACTGGAAGCCG +
Preference number: 3 (lower is better)
Translates to: QGACAEPHSLMS*HPPLNCSYWKP
Trigger: CGGCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCGCTCCTTCCATCCTCTaGCAGAATGTAGCCTTTCGG +
Preference number: 3 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSAPSIL*QNVAFR
Trigger: CCGAAAGGCTACATTCTGCAAGAGGATGGAAGGAGC...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR CAA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCTGACGTGGGAAATATaGAAAGCAAAGATGGCTGTC +
Preference number: 3 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGLTWEI*KAKMAV
Trigger: GACAGCCATCTTTGCTTTCAATATTTCCCACGTCAG...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp TGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCATCAGGCACTCGTCCTGGTaGGGGCTGGCGGTAAACCCA +
Preference number: 3 (lower is better)
Translates to: CKTHIGFCLRLILDIGGIRHSSW*GLAVNP
Trigger: TGGGTTTACCGCCAGCCCCAACCAGGACGAGTGCCT...GATGCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR TCA 72 bp GACATTCATTACGATCATTGCACTGTCCTGTGGAGGTaGAGCGGTAGCCGGGCTTACAGTCACAGCGGTAGC +
Preference number: 3 (lower is better)
Translates to: DIHYDHCTVLWR*SGSRAYSHSGS
Trigger: GCTACCGCTGTGACTGTAAGCCCGGCTACCGCTTCACCTCCACAGGACAGTGCAATGATCGTAATGAATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR GCA 72 bp CCACTGAGGCTGTTTCCTGGTCCTCCCAGACCTCTATaGACGTGTGGGCCAGTCACCGAAATTTCATTACCA +
Preference number: 3 (lower is better)
Translates to: PLRLFPGPPRPL*TCGPVTEISLP
Trigger: TGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACAGCCTCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR CCA 72 bp ACGGGTGTTGAGGCAGCGCCCATTCTCACAGATCCCTaGCTTCGTCTGACATTCATTCTCATCTACACAGCC +
Preference number: 3 (lower is better)
Translates to: TGVEAAPILTDP*LRLTFILIYTA
Trigger: GGCTGTGTAGATGAGAATGAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGCGCTGCCTCAACACCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR CAA 90 bp TCATTGATGTCTTGGCATCCTCCACTGAACTGTTCATACTGGAAGCCGGCGGGACAGCAGCATTCCGATTaGGTGACGGGGTTCCTGTTG +
Preference number: 3 (lower is better)
Translates to: SLMSWHPPLNCSYWKPAGQQHSD*VTGFLL
Trigger: CAACAGGAACCCCGTCACCAAATCGGAATGCTGCTG...TCCCGCCGGCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAGACATCAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR TCA 72 bp TGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTaGGGCATTCGTTTTCATCAACACACTGGTTCCACT +
Preference number: 3 (lower is better)
Translates to: CCDRRLLRRCER*GIRFHQHTGST
Trigger: AGTGGAACCAGTGTGTTGATGAAAACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR CCA 72 bp GCTGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTaGGCCAGTCACCGAAATTTCATTACCACTTGGTGT +
Preference number: 3 (lower is better)
Translates to: AVSWSSQTSMHV*ASHRNFITTWC
Trigger: ACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR CCA 72 bp ACTCATCAATATCTTCACAGGCTTTCCCGTCAGCACTaGGCACGAAGCCCATGTCGCATTCACAGCGGTATC +
Preference number: 3 (lower is better)
Translates to: THQYLHRLSRQH*ARSPCRIHSGI
Trigger: GATACCGCTGTGAATGCGACATGGGCTTCGTGCCCAGTGCTGACGGGAAAGCCTGTGAAGATATTGATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR CCA 72 bp AGTCTTCCACAGGGAGAGTCATCCTGCCCGTTGTTCTaGATCTTGAAACTTGGGAGACCCACACCAAAGGAG +
Preference number: 3 (lower is better)
Translates to: SLPQGESSCPLF*ILKLGRPTPKE
Trigger: CTCCTTTGGTGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACGGGCAGGATGACTCTCCCTGTGGAAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp ACCGGTATAAATGTCGATGACAAAGCCTGGCCTTTGACTTCCACAGAGTGTAGCTCAGGTAGTAGCCGGTaGGACAGCGGCACTGGAAAC +
Preference number: 3 (lower is better)
Translates to: TGINVDDKAWPLTSTECSSGSSR*DSGTGN
Trigger: GTTTCCAGTGCCGCTGTCCAACCGGCTACTACCTGA...GCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGTCATCGACATTTATACCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp CCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAATCCCCGCTGGCATTTATGATCCTCTGTCATaGACACATTCCCCATTTCGG +
Preference number: 3 (lower is better)
Translates to: PRLHSWSRSDQVRIPAGIYDPLS*THSPFR
Trigger: CCGAAATGGGGAATGTGTCAATGACAGAGGATCATA...AATGCCAGCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp TACCCTCACACTCGTCCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGACACTCATCAAGATCTTaGCAGCTCCTTCCATCCTCT +
Preference number: 3 (lower is better)
Translates to: YPHTRPRLHSWSRSDQVRHSSRS*QLLPSS
Trigger: AGAGGATGGAAGGAGCTGCAAAGATCTTGATGAGTG...TCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGACGAGTGTGAGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCTTAGACCCGCACAGATaGATGTCAGAGGTGCATTCA +
Preference number: 3 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHALDPHR*MSEVHS
Trigger: TGAATGCACCTCTGACATCAATCTGTGCGGGTCTAA...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp CACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTCAACAGGCCAGGGAGGTaGTGGCAAGTTCCAAAGACA +
Preference number: 3 (lower is better)
Translates to: HQLQFHCCRLYLHCLLEVNRPGR*WQVPKT
Trigger: TGTCTTTGGAACTTGCCACAACCTCCCTGGCCTGTT...GACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp GACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCAATGATAAAATTGCAGGGTTaGGGAGCCTGGTTGCACTCG +
Preference number: 3 (lower is better)
Translates to: DVWCWVNPGGHLHVKPPMIKLQG*GAWLHS
Trigger: CGAGTGCAACCAGGCTCCCAAACCCTGCAATTTTAT...CATTGGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR TCA 72 bp ATGCATTCGGCGTTGCGCTGGCACACTGGGCCGTTCTaGCACTCGTCAATATCTTCACAAACCAACAACTTG +
Preference number: 3 (lower is better)
Translates to: MHSALRWHTGPF*HSSISSQTNNL
Trigger: CAAGTTGTTGGTTTGTGAAGATATTGACGAGTGTCAGAACGGCCCAGTGTGCCAGCGCAACGCCGAATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR TCA 72 bp AGGCAGCGCCCATTCTCACAGATCCCTGGCTTCGTCTaGCATTCATTCTCATCTACACAGCCTTCTCCATCA +
Preference number: 3 (lower is better)
Translates to: RQRPFSQIPGFV*HSFSSTQPSPS
Trigger: TGATGGAGAAGGCTGTGTAGATGAGAATGAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGCGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR TCA 72 bp GATTTGGTGACGGGGTTCCTGTTGCTGGAGCCGATCTaGCACATGTTTTGTAGCACCTCTGTGAAGCAGTAC +
Preference number: 3 (lower is better)
Translates to: DLVTGFLLLEPI*HMFCSTSVKQY
Trigger: GTACTGCTTCACAGAGGTGCTACAAAACATGTGTCAGATCGGCTCCAGCAACAGGAACCCCGTCACCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR GCA 72 bp ACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTaGTTCTCCGTTTCCTGCCCCGTTTGGGGTAGCCAT +
Preference number: 3 (lower is better)
Translates to: TDPRYWRHQFRL*FSVSCPVWGSH
Trigger: ATGGCTACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACCACATTCCCGTACGTTaGCTGGAAGGATGGCATGTC +
Preference number: 3 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYHIPVR*LEGWHV
Trigger: GACATGCCATCCTTCCAGCAAACGTACGGGAATGTG...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR CAA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCCACTGTTCACAGGGCTaGTTCCACGCCCGGCCAATG +
Preference number: 3 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRHCSQG*FHARPM
Trigger: CATTGGCCGGGCGTGGAACAAGCCCTGTGAACAGTG...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCGACAAAGCCTGGCCTTaGACTTCCACAGAGTGTAGC +
Preference number: 3 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFDKAWP*TSTECS
Trigger: GCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGTC...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCGGACCCATCCAAGTTTaGACAGGTACCTGGTGCACA +
Preference number: 3 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFGPIQV*TGTWCT
Trigger: TGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCC...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGGAACTGGCAGTTGTGTaGCTTGGTTGCACACTCATC +
Preference number: 3 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLELAVV*LGCTLI
Trigger: GATGAGTGTGCAACCAAGCAACACAACTGCCAGTTC...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR-3UTR CAA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGAATCCGGGAGGACATTaGCATGTGAAGCCGCCAATG +
Preference number: 3 (lower is better)
Translates to: CLRLILDIGGISFVCASPNPGGH*HVKPPM
Trigger: CATTGGCGGCTTCACATGCAAATGTCCTCCCGGATT...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR TCA 72 bp CGTCCATATCAACTGCTGAATCATCAGGTCCCACGATaGTCCCACTTCCATAAGGACATATCTGGCGGAAGG +
Preference number: 3 (lower is better)
Translates to: RPYQLLNHQVPR*SHFHKDISGGR
Trigger: CCTTCCGCCAGATATGTCCTTATGGAAGTGGGATCATCGTGGGACCTGATGATTCAGCAGTTGATATGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR GCA 72 bp TCATCATTGGACCGGGCTCAAATCCCTCCTCGCAGGTaGATTCAAAACCTCCAATCACATTCTTGCAGGTTC +
Preference number: 3 (lower is better)
Translates to: SSLDRAQIPPRR*IQNLQSHSCRF
Trigger: GAACCTGCAAGAATGTGATTGGAGGTTTTGAATGCACCTGCGAGGAGGGATTTGAGCCCGGTCCAATGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR CCA 72 bp AGTAAAAGAGAAAGGATGACGTCAAGGCACTCGTCCTaGTTGGGGCTGGCGGTAAACCCATCATTACACTCA +
Preference number: 3 (lower is better)
Translates to: SKRERMTSRHSS*LGLAVNPSLHS
Trigger: TGAGTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAGTGCCTTGACGTCATCCTTTCTCTTTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR CAA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCGCTCTTCAAAGATTTTaGAGAGCACTTTCCTGTGTC +
Preference number: 3 (lower is better)
Translates to: WSSQTSMHVWASHRNFITALQRF*RALSCV
Trigger: GACACAGGAAAGTGCTCTCAAAAATCTTTGAAGAGC...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR-3UTR CAA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTTGCCCCCAGGAGGTCTaGCCAAGGAGTCTTCCACAG +
Preference number: 3 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRICPQEV*PRSLPQ
Trigger: CTGTGGAAGACTCCTTGGCAAGACCTCCTGGGGGCA...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCAGGTTTGGGAGCCTGGTaGCACTCGTTCAGATCTACA +
Preference number: 3 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPGLGAW*HSFRST
Trigger: TGTAGATCTGAACGAGTGCAACCAGGCTCCCAAACC...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTTTTTTGCAGATAAAATaGCAGGGTTTGGGAGCCTGG +
Preference number: 3 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGFLQIK*QGLGAW
Trigger: CCAGGCTCCCAAACCCTGCAATTTTATCTGCAAAAA...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGAGTTGTGTTGCTTGGTaGCACACTCATCAAGATCTT +
Preference number: 3 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMSCVAW*HTHQDL
Trigger: AAGATCTTGATGAGTGTGCAACCAAGCAACACAACT...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATGAACTGGCAGTTGTGTaGCTTGGTTGCACACTCATC +
Preference number: 3 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHELAVV*LGCTLI
Trigger: GATGAGTGTGCAACCAAGCAACACAACTGCCAGTTC...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR-3UTR CAA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGTCAGAGGTGCATTCATaGTTATCAATGCAGGACGTA +
Preference number: 3 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMSEVHS*LSMQDV
Trigger: TACGTCCTGCATTGATAACAATGAATGCACCTCTGA...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATTCGATATCTGCTCCATaGGTCATGAATCCTCGGCCA +
Preference number: 3 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHSISAP*VMNPRP
Trigger: TGGCCGAGGATTCATGACCAATGGAGCAGATATCGA...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR CCA 72 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATaGCCAACCCCCAATGGAAATACACGTCCCAGTTTT +
Preference number: 3 (lower is better)
Translates to: RTFAGRMACQHK*PTPNGNTRPSF
Trigger: AAAACTGGGACGTGTATTTCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR CCA 72 bp AGCCTTCTCCCTTCAAGGCACAGCAGCATTCCTGCTTaGAGTGATTTCTGGATTTGGGTGATGAACACTTTC +
Preference number: 3 (lower is better)
Translates to: SLLPSRHSSIPA*SDFWIWVMNTF
Trigger: GAAAGTGTTCATCACCCAAATCCAGAAATCACTCCAAGCAGGAATGCTGCTGTGCCTTGAAGGGAGAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR CCA 72 bp GGAACTCTTCTCGCCTCCCAAAATCTGCCTCAACAATaGCCCAAGATTCCATTTAACCACGTCCTCTCCTTT +
Preference number: 3 (lower is better)
Translates to: GTLLASQNLPQQ*PKIPFNHVLSF
Trigger: AAAGGAGAGGACGTGGTTAAATGGAATCTTGGGCCATTGTTGAGGCAGATTTTGGGAGGCGAGAAGAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp TTCACATGTCATCATTGGACCGGGCTCAAATCCCTCCTCGCAGGTGCATTCAAACAGACATCGGGTTCTTaGCATTCGTCCATATCAACT +
Preference number: 3 (lower is better)
Translates to: FTCHHWTGLKSLLAGAFKQTSGS*HSSIST
Trigger: AGTTGATATGGACGAATGCAAAGAACCCGATGTCTG...TTTGAATGCACCTGCGAGGAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp CAGATCTTCAGCCACAGAATTAAATCCCCACGTCCTTTATATACAGGAGCAATCACCACGTCCTCTCCTTaGGGGCAGAAATCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: QIFSHRIKSPRPLYTGAITTSSP*GQKSLG
Trigger: TCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGT...GATTGCTCCTGTATATAAAGGACGTGGGGATTTAATTCTGTGGCTGAAGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTTTTTTGCAGATAAAATaGCAGGGTTTGGGAGCCTGG +
Preference number: 3 (lower is better)
Translates to: LDIGGISFVCASPFPAPFFLQIK*QGLGAW
Trigger: CCAGGCTCCCAAACCCTGCAATTTTATCTGCAAAAA...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
48% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCCAAAAGTTACAGCAATaGGATACAGTCTGGGATTAT +
Preference number: 3 (lower is better)
Translates to: WSSQTSMHVWASHRNFITQKLQQ*DTVWDY
Trigger: ATAATCCCAGACTGTATCCAATTGCTGTAACTTTTG...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR-3UTR CAA 90 bp GCACTGTCCATGTTTACAGACATCGGGTTCTTTGCATTCGTCCATATCAACTGCCCAACTCCAATTTCATaGCTGCAGGCTGTATCTCCA +
Preference number: 3 (lower is better)
Translates to: ALSMFTDIGFFAFVHINCPTPIS*LQAVSP
Trigger: TGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGG...GCAGTTGATATGGACGAATGCAAAGAACCCGATGTCTGTAAACATGGACAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCACACTCATCAAGATCTTaGCAGCTCCTTCCATCCTCT +
Preference number: 3 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPHSSRS*QLLPSS
Trigger: AGAGGATGGAAGGAGCTGCAAAGATCTTGATGAGTG...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR GCA 72 bp AGGAAGCTTTGGAAACACCAACTCCAATTTCATTGCTaGAGGCTGTATCTCCATTGTCTCCTCGAGGTCGAA +
Preference number: 3 (lower is better)
Translates to: RKLWKHQLQFHC*RLYLHCLLEVE
Trigger: TTCGACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTGTTTCCAAAGCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR GCA 72 bp CTTGCCATGTGCCTTGCACACAGGGCAATAAACATCTaGTGTCTGATCAAGGTCAGGTTTACCATGATAAGC +
Preference number: 3 (lower is better)
Translates to: LAMCLAHRAINI*CLIKVRFTMIS
Trigger: GCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATTGCCCTGTGTGCAAGGCACATGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR CCA 72 bp AGTAGCTCATTCGCAAATCTTGGCACCTTCTTCCACTaGAGGACAAGGAAAACCCTTCTGGACACAGACATT +
Preference number: 3 (lower is better)
Translates to: SSSFANLGTFFH*RTRKTLLDTDI
Trigger: AATGTCTGTGTCCAGAAGGGTTTTCCTTGTCCTCCAGTGGAAGAAGGTGCCAAGATTTGCGAATGAGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR CCA 72 bp CATGTGAAGCCGCCAATGGTGTTAACACATAGGAACTaGCAGTTGTGTTGCTTGGTTGCACACTCATCAAGA +
Preference number: 3 (lower is better)
Translates to: HVKPPMVLTHRN*QLCCLVAHSSR
Trigger: TCTTGATGAGTGTGCAACCAAGCAACACAACTGCCAGTTCCTATGTGTTAACACCATTGGCGGCTTCACATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGCACCTGTACCTTGCTTaGGTAATACAAAGAATAGTG +
Preference number: 3 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLHLYLA*VIQRIV
Trigger: CACTATTCTTTGTATTACCAAAGCAAGGTACAGGTG...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR CAA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCCAGGCTGTATCTCCATaGTCTCCTCGAGGTCGAATA +
Preference number: 3 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRQAVSP*SPRGRI
Trigger: TATTCGACCTCGAGGAGACAATGGAGATACAGCCTG...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCAAACTCCCAAAGGTGTaGATACATTTTCCTCCTTGG +
Preference number: 3 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFKLPKV*IHFPPW
Trigger: CCAAGGAGGAAAATGTATCAACACCTTTGGGAGTTT...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGCCGTTGTTCTGGATCTaGAAACTTGGGAGACCCACA +
Preference number: 3 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKEPLFWI*KLGRPT
Trigger: TGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACGG...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCAGAGTCATCCTGCCCGTaGTTCTGGATCTTGAAACTT +
Preference number: 3 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPESSCP*FWILKL
Trigger: AAGTTTCAAGATCCAGAACAACGGGCAGGATGACTC...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp CAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAGCTCCTTCCATCCCTCCCTTCTGTGTTTTaGCAGATAAAATTGCAGGGT +
Preference number: 3 (lower is better)
Translates to: QLCCLVAHSSRSLQLLPSLPSVF*QIKLQG
Trigger: ACCCTGCAATTTTATCTGCAAAAACACAGAAGGGAG...GGATGGAAGGAGCTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCAACATTCATTGATGTCTaGGCATCCTCCACTGAACTG +
Preference number: 3 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPTFIDV*ASSTEL
Trigger: CAGTTCAGTGGAGGATGCCAAGACATCAATGAATGT...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR TCA 72 bp ACTCATCCTCATCTTTGCACATCCTACGGTCTTCTCTaGGCACATATCCCACGGGACATTTGCATTCATATG +
Preference number: 3 (lower is better)
Translates to: THPHLCTSYGLL*AHIPRDICIHM
Trigger: CATATGAATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGATGAGGATGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537463.6
ENST00000674301.1
3UTR GCA 72 bp AATCAGAGCCTCAGTCTACTTATTGAACTTGCCATGTaGCTTGCACACAGGGCAATAAACATCTGCTGTCTG +
Preference number: 3 (lower is better)
Translates to: NQSLSLLIELAM*LAHRAINICCL
Trigger: CAGACAGCAGATGTTTATTGCCCTGTGTGCAAGGCACATGGCAAGTTCAATAAGTAGACTGAGGCTCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR GCA 72 bp GAAAGCAAAGATGGCTGTCTTCTCAACATCCCAACTTaGAAGACTCACATTGGCTTCTGTCTCAGACTGATC +
Preference number: 3 (lower is better)
Translates to: ESKDGCLLNIPT*KTHIGFCLRLI
Trigger: GATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCAAGTTGGGATGTTGAGAAGACAGCCATCTTTGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAGACATTGACCCCTTGTaGACAGGAATGACCGAGGGT +
Preference number: 3 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKDIDPL*TGMTEG
Trigger: ACCCTCGGTCATTCCTGTCAACAAGGGGTCAATGTC...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR-3UTR CAA 90 bp AGAAAGGATGAAACCATGATTGCAGCGGCAGTTGAAGGAACCAATTGTGTTCCGCCAGGACAAAGAATTTaGTACTCGGATGTGTTCACA +
Preference number: 3 (lower is better)
Translates to: RKDETMIAAAVEGTNCVPPGQRI*YSDVFT
Trigger: TGTGAACACATCCGAGTACAAAATTCTTTGTCCTGG...CGGAACACAATTGGTTCCTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp TTCACATGTCATCATTGGACCGGGCTCAAATCCCTCCTCGCAGGTGCATTCAAACACTGTATTAATGCATaGGCCATTTCTGCAAAGATT +
Preference number: 3 (lower is better)
Translates to: FTCHHWTGLKSLLAGAFKHCINA*AISAKI
Trigger: AATCTTTGCAGAAATGGCCAATGCATTAATACAGTG...TTTGAATGCACCTGCGAGGAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp CAGATCTTCAGCCACAGAATTAAATCCCCACGTCCTTTATATACAGGAGCAATCGCCTCAGTCTACTTATaGAACTTGCCATGTGCCTTG +
Preference number: 3 (lower is better)
Translates to: QIFSHRIKSPRPLYTGAIASVYL*NLPCAL
Trigger: CAAGGCACATGGCAAGTTCAATAAGTAGACTGAGGC...GATTGCTCCTGTATATAAAGGACGTGGGGATTTAATTCTGTGGCTGAAGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCACTCCCTTCTGTGTTTTaGCAGATAAAATTGCAGGGT +
Preference number: 3 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPLPSVF*QIKLQG
Trigger: ACCCTGCAATTTTATCTGCAAAAACACAGAAGGGAG...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR-3UTR CAA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTGCAGGACGTATGGTGTaGGGTAAATCCGGGAGGACA +
Preference number: 3 (lower is better)
Translates to: NKSLVLISTITNPHIKGIAGRMV*GKSGRT
Trigger: TGTCCTCCCGGATTTACCCAACACCATACGTCCTGC...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR TCA 72 bp TTCCTTGCCCCCTTTCAAATACAGCATCTACCAAGATaGCCCCAAGGAAAGTACTTTCCTCTAGAAACAACC +
Preference number: 3 (lower is better)
Translates to: FLAPFQIQHLPR*PQGKYFPLETT
Trigger: GGTTGTTTCTAGAGGAAAGTACTTTCCTTGGGGTCATCTTGGTAGATGCTGTATTTGAAAGGGGGCAAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR GCA 72 bp ACTTCTCATTTTGAAGACTGTATCCAGGTGGGCAAATaGATCTGTAGGACCCATCCAAGTTTTGACAGGTAC +
Preference number: 3 (lower is better)
Translates to: TSHFEDCIQVGK*ICRTHPSFDRY
Trigger: GTACCTGTCAAAACTTGGATGGGTCCTACAGATGCATTTGCCCACCTGGATACAGTCTTCAAAATGAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR CCA 72 bp AAAATTTTTCCGGCTGAAACATCTGTAACAGCGGCATaGGAAGCCAGTGAAATGGTCAGTTGCATGTACACA +
Preference number: 3 (lower is better)
Translates to: KIFPAETSVTAA*EASEMVSCMYT
Trigger: TGTGTACATGCAACTGACCATTTCACTGGCTTCCCATGCCGCTGTTACAGATGTTTCAGCCGGAAAAATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCACCTGTACCTTGCTTaGGTAATACAAAGAATAGTG +
Preference number: 3 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPHLYLA*VIQRIV
Trigger: CACTATTCTTTGTATTACCAAAGCAAGGTACAGGTG...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR-3UTR CAA 90 bp AGAAAGGATGAAACCATGATTGCAGCGGCAGTTGAAGGAACCAATTGTGTTCCGCAGCAGCACATCTTCTaGGTCATGTTGAATAACAAT +
Preference number: 3 (lower is better)
Translates to: RKDETMIAAAVEGTNCVPQQHIF*VMLNNN
Trigger: ATTGTTATTCAACATGACCAAGAAGATGTGCTGCTG...CGGAACACAATTGGTTCCTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCAGTTCTCAGAACCACTaGCCCTGTTCTGCTTCCAAT +
Preference number: 3 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFSSQNH*PCSASN
Trigger: ATTGGAAGCAGAACAGGGCAAGTGGTTCTGAGAACT...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp CATTCATTGTTATCAATGCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATAGTTGTGTTGCTTGGTaGCACACTCATCAAGATCTT +
Preference number: 3 (lower is better)
Translates to: HSLLSMQDVWCWVNPGGHSCVAW*HTHQDL
Trigger: AAGATCTTGATGAGTGTGCAACCAAGCAACACAACT...ATGTCCTCCCGGATTTACCCAACACCATACGTCCTGCATTGATAACAATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR TCA 72 bp TGTTGTAGGAACAGCAGCACATCTTCTTGGTCATGTTaGATAACAATTCTCCATCACAGGTCTGGTTGTCAG +
Preference number: 3 (lower is better)
Translates to: CCRNSSTSSWSC*ITILHHRSGCQ
Trigger: CTGACAACCAGACCTGTGATGGAGAATTGTTATTCAACATGACCAAGAAGATGTGCTGCTGTTCCTACAACA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR TCA 72 bp CTGTCATTGACACATTCCCCATTTCGGCAAACATCGTaGATAACCTTGCATTCATCGATATCTGCTCCATTG +
Preference number: 3 (lower is better)
Translates to: LSLTHSPFRQTS*ITLHSSISAPL
Trigger: CAATGGAGCAGATATCGATGAATGCAAGGTTATTCACGATGTTTGCCGAAATGGGGAATGTGTCAATGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR TCA 72 bp GATACCCGGGTCCACAGATGCACATATATGTGCCAATaGGGTTCTTGCATTCCATTTGTTTTTCAGTACAGT +
Preference number: 3 (lower is better)
Translates to: DTRVHRCTYMCQ*GSCIPFVFQYS
Trigger: ACTGTACTGAAAAACAAATGGAATGCAAGAACCTCATTGGCACATATATGTGCATCTGTGGACCCGGGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR GCA 72 bp TGTGGCAAAGGCAATAAAAGCTTCCAACTGTGTCAATaGACTGCCCATGACTGCATATATTGGGGATTTCTT +
Preference number: 3 (lower is better)
Translates to: CGKGNKSFQLCQ*TAHDCIYWGFL
Trigger: AAGAAATCCCCAATATATGCAGTCATGGGCAGTGCATTGACACAGTTGGAAGCTTTTATTGCCTTTGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR GCA 72 bp GTAACAGCGGCATGGGAAGCCAGTGAAATGGTCAGTTaGATGTACACAACACAAACACCACTAGTTAAAAAT +
Preference number: 3 (lower is better)
Translates to: VTAAWEASEMVS*MYTTQTPLVKN
Trigger: ATTTTTAACTAGTGGTGTTTGTGTTGTGTACATGCAACTGACCATTTCACTGGCTTCCCATGCCGCTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCTCTAGAAGACATTCATaGATATCCACACAGGTCCTC +
Preference number: 3 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRSRRHS*ISTQVL
Trigger: GAGGACCTGTGTGGATATCAATGAATGTCTTCTAGA...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp AATAAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCCAACCAGAATTGATATaGCAGGGAAAGGAACGGGCT +
Preference number: 3 (lower is better)
Translates to: NKHLLSDQGQVYHDKQTSQPELI*QGKERA
Trigger: AGCCCGTTCCTTTCCCTGCAATATCAATTCTGGTTG...GGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTAGTGGATACCATCACTaGGTGACCCAGAGCTATATA +
Preference number: 3 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRISGYHH*VTQSYI
Trigger: TATATAGCTCTGGGTCACCAAGTGATGGTATCCACT...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp CACTTCATAAACTGTGCATCTCCAATCAGAATGGTAAACAGGTTTCACTGTAGTGCTCATACAATCATCTaGTCCTTACTCCAGACTAGG +
Preference number: 3 (lower is better)
Translates to: HFINCASPIRMVNRFHCSAHTII*SLLQTR
Trigger: CCTAGTCTGGAGTAAGGACAAGATGATTGTATGAGC...ACTACAGTGAAACCTGTTTACCATTCTGATTGGAGATGCACAGTTTATGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp AATAAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTCACAGCCTAAGTGCTaGGCTCATACAATCATCTTG +
Preference number: 3 (lower is better)
Translates to: NKHLLSDQGQVYHDKQTSSQPKC*AHTIIL
Trigger: CAAGATGATTGTATGAGCCAAGCACTTAGGCTGTGA...GGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTAGAGTAGTCCATCAATaGAAAGCACATTCCCGTACG +
Preference number: 3 (lower is better)
Translates to: NKSLVLISTITNPHIKGIRVVHQ*KAHSRT
Trigger: CGTACGGGAATGTGCTTTCAATTGATGGACTACTCT...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR GCA 72 bp GCATTGGCCATTTCTGCAAAGATTCCCATTTCCACTTaGACATTCATCAACATCTATACAGTCATTGTTGTG +
Preference number: 3 (lower is better)
Translates to: ALAISAKIPIST*TFINIYTVIVV
Trigger: CACAACAATGACTGTATAGATGTTGATGAATGTGCAAGTGGAAATGGGAATCTTTGCAGAAATGGCCAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR CCA 72 bp CTCATCAATATCTTCCAATATAACGGTGATAGGATTTaGTCGGAAACCTTCCCCTCCAGGACAAAGAATTTT +
Preference number: 3 (lower is better)
Translates to: LINIFQYNGDRI*SETFPSRTKNF
Trigger: AAAATTCTTTGTCCTGGAGGGGAAGGTTTCCGACCAAATCCTATCACCGTTATATTGGAAGATATTGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTAGAGTAGTCCATCAATaGAAAGCACATTCCCGTACG +
Preference number: 3 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCRVVHQ*KAHSRT
Trigger: CGTACGGGAATGTGCTTTCAATTGATGGACTACTCT...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR CCA 72 bp CTATTTTCTGTGCTATTTTATCACAGCCTAAGTGCTTaGCTCATACAATCATCTTGTCCTTACTCCAGACTA +
Preference number: 3 (lower is better)
Translates to: LFSVLFYHSLSA*LIQSSCPYSRL
Trigger: TAGTCTGGAGTAAGGACAAGATGATTGTATGAGCCAAGCACTTAGGCTGTGATAAAATAGCACAGAAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR-3UTR CAA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGTTTCATATCGACGGATaGAGCCTAACAGCTAAATAC +
Preference number: 3 (lower is better)
Translates to: ESEIERSQTIERYRFKSQFHIDG*SLTAKY
Trigger: GTATTTAGCTGTTAGGCTCAATCCGTCGATATGAAA...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
3UTR CCA 72 bp AGTCAGGTTAATGACACCAGACTCTGCTACTTTCAATaGATAAAACAAGGGATCGACTCATATGTTAAATTT +
Preference number: 3 (lower is better)
Translates to: SQVNDTRLCYFQ*IKQGIDSYVKF
Trigger: AAATTTAACATATGAGTCGATCCCTTGTTTTATCCATTGAAAGTAGCAGAGTCTGGTGTCATTAACCTGACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp CATATCTGGCGGAAGGCCTCATCAGGTTCCGTGGGGCAGAGCTCGCAGGGGTCTACTTCAGGCGGCCCCTaGCAGTGGAGAAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: HIWRKASSGSVGQSSQGSTSGGP*QWRSGG
Trigger: GCCGCCGCTTCTCCACTGGCAGGGGCCGCCTGAAGT...AGACCCCTGCGAGCTCTGCCCCACGGAACCTGATGAGGCCTTCCGCCAGATATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp GATGCATTCGGCGTTGCGCTGGCACACTGGGCCGTTCTGACACTCGTCAATATCGACGCCCTCGACGCATaGTGCCGAGCCGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: DAFGVALAHWAVLTLVNIDALDA*CRAATG
Trigger: GCCGGTGGCGGCTCGGCATCATGCGTCGAGGGCGTC...GATATTGACGAGTGTCAGAACGGCCCAGTGTGCCAGCGCAACGCCGAATGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GATGCATTCGGCGTTGCGCTGGCACACTGGGCCGTTCTGACACTCGTCAATATCGGCGGCCCCTGCCAGTaGAGAAGCGGCGGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: DAFGVALAHWAVLTLVNIGGPCQ*RSGGSD
Trigger: GTCGGAGCCGCCGCTTCTCCACTGGCAGGGGCCGCC...GATATTGACGAGTGTCAGAACGGCCCAGTGTGCCAGCGCAACGCCGAATGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCGACGCCCTCGACGCATaGTGCCGAGCCGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSDALDA*CRAATG
Trigger: GCCGGTGGCGGCTCGGCATCATGCGTCGAGGGCGTC...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCGGAGGCGGCGGCGGCTaGTCCCAGTCGTGGCCGCTA +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITGGGGG*SQSWPL
Trigger: TAGCGGCCACGACTGGGAGCAGCCGCCGCCGCCTCC...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGGGGCAGATCTCACAGTaGGGACCCCAGCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LGLCGSNQVDSHTGNRPRGQISQ*GPQPLP
Trigger: AGGGAGAGGCTGGGGTCCCCACTGTGAGATCTGCCC...CCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGCCCCCAATGATGTTCTaGCAGCCATGCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLPPMMF*QPCWQR
Trigger: CCGCTGCCAGCATGGCTGCCAGAACATCATTGGGGG...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCTGGAACAGCCATAGCTaGAGGGGGCCTGCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRWNSHS*RGPAQS
Trigger: GCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCCA...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTCCTCATCAGGTTCCGTaGGGCAGAGCTCGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVPHQVP*GRARRG
Trigger: ACCCCTGCGAGCTCTGCCCCACGGAACCTGATGAGG...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTGGGCAGATCTCACAGTaGGGACCCCAGCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVGQISQ*GPQPLP
Trigger: AGGGAGAGGCTGGGGTCCCCACTGTGAGATCTGCCC...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAATCCCCGCTGGCATTAGCTCCCACGGGTGTTaGGGCAGCGCCCATTCTCAC +
Preference number: 4 (lower is better)
Translates to: PRLHSWSRSDQVRIPAGISSHGC*GSAHSH
Trigger: GTGAGAATGGGCGCTGCCTCAACACCCGTGGGAGCT...AATGCCAGCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTCAGGCGGCCCCTaGCAGTGGAGAAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITTSGGP*QWRSGG
Trigger: GCCGCCGCTTCTCCACTGGCAGGGGCCGCCTGAAGT...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp CCATTTAACCACGTCCTCTCCTTTGGGGCAGAAATCTCTGGGAGTAGGGGCAAGACTTCAGGCGGCCCCTaGCAGTGGAGAAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PFNHVLSFGAEISGSRGKTSGGP*QWRSGG
Trigger: GCCGCCGCTTCTCCACTGGCAGGGGCCGCCTGAAGT...CTTGCCCCTACTCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGTTAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCGCCTTCTCCAGGCGCTaGTCCCACTTCAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITAFSRR*SHFRRP
Trigger: GGGCCGCCTGAAGTGGGAGCAGCGCCTGGAGAAGGC...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp CCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAATCCCCGCTGGCATTTGGAACAGCCATAGCTaGAGGGGGCCTGCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PRLHSWSRSDQVRIPAGIWNSHS*RGPAQS
Trigger: GCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCCA...AATGCCAGCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTCCTCCCAGACCTCTATaGACGTGTGGGCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVPPRPL*TCGPVT
Trigger: GGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGGGCGGCCCCTGCCAGTaGAGAAGCGGCGGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLGGPCQ*RSGGSD
Trigger: GTCGGAGCCGCCGCTTCTCCACTGGCAGGGGCCGCC...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCGGCGACAGTGACCCCTaGAGACCAGCATCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITGDSDP*RPASAG
Trigger: GCCGGCCGATGCTGGTCTCCAGGGGTCACTGTCGCC...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTTCTGGCAGCCATGCTaGCAGCGGTGGTTACCCTCA +
Preference number: 4 (lower is better)
Translates to: LGLCGSNQVDSHTGNRPRFWQPC*QRWLPS
Trigger: TGAGGGTAACCACCGCTGCCAGCATGGCTGCCAGAA...CCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGACTGACAGGTGGCTCTaGGTTTCCTCGGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: WTATQVTALGIGTAIAAGTDRWL*VSSAHA
Trigger: GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGT...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp CATATCTGGCGGAAGGCCTCATCAGGTTCCGTGGGGCAGAGCTCGCAGGGGTCTCCATCCCCACAGGAATaGCGGCAAATGGGGACAATA +
Preference number: 4 (lower is better)
Translates to: HIWRKASSGSVGQSSQGSPSPQE*RQMGTI
Trigger: TATTGTCCCCATTTGCCGGCATTCCTGTGGGGATGG...AGACCCCTGCGAGCTCTGCCCCACGGAACCTGATGAGGCCTTCCGCCAGATATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp CATATCTGGCGGAAGGCCTCATCAGGTTCCGTGGGGCAGAGCTCGCAGGGGTCTTTCTCTTGGCCCGACTaGCTCTGGTTTCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: HIWRKASSGSVGQSSQGSFSWPD*LWFPSR
Trigger: ACGTGAAGGAAACCAGAGCCAGTCGGGCCAAGAGAA...AGACCCCTGCGAGCTCTGCCCCACGGAACCTGATGAGGCCTTCCGCCAGATATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGGTTGCGCTGGCACACTaGGCCGTTCTGACACTCGTC +
Preference number: 4 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLVALAH*AVLTLV
Trigger: GACGAGTGTCAGAACGGCCCAGTGTGCCAGCGCAAC...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGCCATGCTGGCAGCGGTaGTTACCCTCACACTCGTCC +
Preference number: 4 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLPCWQR*LPSHSS
Trigger: GGACGAGTGTGAGGGTAACCACCGCTGCCAGCATGG...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp ACGGGTGTTGAGGCAGCGCCCATTCTCACAGATCCCTGGCTTCGTCTGACATTCCCCCCAATGATGTTCTaGCAGCCATGCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TGVEAAPILTDPWLRLTFPPMMF*QPCWQR
Trigger: CCGCTGCCAGCATGGCTGCCAGAACATCATTGGGGG...GAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGCGCTGCCTCAACACCCGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR TCA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGACAAAGCCTGGCCTTTaGCTTCCACAGAGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLTKPGL*LPQSVA
Trigger: TGCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGT...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp ATGACGTCAAGGCACTCGTCCTGGTTGGGGCTGGCGGTAAACCCATCATTACACACTGTCCTGTGGAGGTaGAGCGGTAGCCGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: MTSRHSSWLGLAVNPSLHTVLWR*SGSRAY
Trigger: GTAAGCCCGGCTACCGCTTCACCTCCACAGGACAGT...GTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAGTGCCTTGACGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR TCA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGTCCTACGGTCTTCTCTaGGCACATATCCCACGGGAC +
Preference number: 4 (lower is better)
Translates to: WTATQVTALGIGTAIAAGSYGLL*AHIPRD
Trigger: GTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGA...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TACCCTCACACTCGTCCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGACCATCAGGTCTCCGCTaGTACCCGGGTCCACAGATG +
Preference number: 4 (lower is better)
Translates to: YPHTRPRLHSWSRSDQVRPSGLR*YPGPQM
Trigger: CATCTGTGGACCCGGGTATCAGCGGAGACCTGATGG...TCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGACGAGTGTGAGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGTTTGTAGCACCTCTGTaGAGCAGTACCCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLFVAPL*SSTLPD
Trigger: ATCGGGAAGGGTACTGCTTCACAGAGGTGCTACAAA...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTGGGGACAGAGTTTCTTaGAAGCCACAGTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVGDRVS*KPQSPG
Trigger: TCCAGGGGACTGTGGCTTTCAAGAAACTCTGTCCCC...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCGGGGACAGAGTTTCTTaGAAGCCACAGTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRGDRVS*KPQSPG
Trigger: TCCAGGGGACTGTGGCTTTCAAGAAACTCTGTCCCC...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGGTAGCCTTTCGGGCATaGACACTGGTAACTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LGLCGSNQVDSHTGNRPRVAFRA*TLVTPF
Trigger: GAAGGGAGTTACCAGTGTTCATGCCCGAAAGGCTAC...CCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp GCACTGTCCATGTTTACAGACATCGGGTTCTTTGCATTCGTCCATATCAACTGCGGAGGCGGCGGCGGCTaGTCCCAGTCGTGGCCGCTA +
Preference number: 4 (lower is better)
Translates to: ALSMFTDIGFFAFVHINCGGGGG*SQSWPL
Trigger: TAGCGGCCACGACTGGGAGCAGCCGCCGCCGCCTCC...GCAGTTGATATGGACGAATGCAAAGAACCCGATGTCTGTAAACATGGACAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTAGCCGGCGGGACACATaGACTTGTAGCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFSRRDT*TCSSPG
Trigger: CCCTGGGGAGCTACAAGTGCATGTGTCCCGCCGGCT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGAACAGCCATAGCTaGAGGGGGCCTGCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSWNSHS*RGPAQS
Trigger: GCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCCA...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGCTGCTCCCAGTCGTaGCCGCTACAGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLGCSQS*PLQPLL
Trigger: GAGCAGTGGCTGTAGCGGCCACGACTGGGAGCAGCC...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCCTTTCCCGTCAGCACTaGGCACGAAGCCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSLSRQH*ARSPCR
Trigger: GCGACATGGGCTTCGTGCCCAGTGCTGACGGGAAAG...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGATTTTCACAGACCCCTaGGATCTCCCGGCACTCATC +
Preference number: 4 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGIFTDP*DLPALI
Trigger: GATGAGTGCCGGGAGATCCCAGGGGTCTGTGAAAAT...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp AACACAGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAGTTGCGCTGGCACACTaGGCCGTTCTGACACTCGTC +
Preference number: 4 (lower is better)
Translates to: NTVPLAYAEVTRWTATQVVALAH*AVLTLV
Trigger: GACGAGTGTCAGAACGGCCCAGTGTGCCAGCGCAAC...TACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp ACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCATTCCAGAAACACAGTGTCAAGGCACTCGTCCTaGTTGGGGCTGGCGGTAAAC +
Preference number: 4 (lower is better)
Translates to: TDRWLWVSSAHAHSRNTVSRHSS*LGLAVN
Trigger: GTTTACCGCCAGCCCCAACCAGGACGAGTGCCTTGA...CACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCGGGCAGATCTCACAGTaGGGACCCCAGCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITGQISQ*GPQPLP
Trigger: AGGGAGAGGCTGGGGTCCCCACTGTGAGATCTGCCC...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGCCACGTCTTCACAGCTaGAGCCGGTCTGATCAAGTG +
Preference number: 4 (lower is better)
Translates to: WTATQVTALGIGTAIAAGPRLHS*SRSDQV
Trigger: CACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR CAA 72 bp ACAACCCTAGCACCTCTAAGGTGCCCCCAGGAGGTCTaGCCAAGGAGTCTTCCACAGGGAGAGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: TTLAPLRCPQEV*PRSLPQGESSC
Trigger: GCAGGATGACTCTCCCTGTGGAAGACTCCTTGGCAAGACCTCCTGGGGGCACCTTAGAGGTGCTAGGGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR TCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGATCTCAGGGGCGACAGTaGCCCCTGGAGACCAGCATC +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGSQGRQ*PLETSI
Trigger: GATGCTGGTCTCCAGGGGTCACTGTCGCCCCTGAGA...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp CATATCTGGCGGAAGGCCTCATCAGGTTCCGTGGGGCAGAGCTCGCAGGGGTCTCGGTATAAATGTCGATaGCAAAGCCTGGCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: HIWRKASSGSVGQSSQGSRYKCR*QSLAFD
Trigger: GTCAAAGGCCAGGCTTTGTCATCGACATTTATACCG...AGACCCCTGCGAGCTCTGCCCCACGGAACCTGATGAGGCCTTCCGCCAGATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp CTCGTCCTGGTTGGGGCTGGCGGTAAACCCATCATTACACTCACAGGTGTAGCTAGCTGCCTGCAGTGTTaGTGCATTCGGCGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: LVLVGAGGKPIITLTGVASCLQC*CIRRCA
Trigger: AGCGCAACGCCGAATGCATCAACACTGCAGGCAGCT...AGCTACACCTGTGAGTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR TCA 90 bp CATATCTGGCGGAAGGCCTCATCAGGTTCCGTGGGGCAGAGCTCGCAGGGGTCTGAAAGGATGAAACCATaGTTGCAGCGGCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: HIWRKASSGSVGQSSQGSERMKP*LQRQLK
Trigger: CTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTC...AGACCCCTGCGAGCTCTGCCCCACGGAACCTGATGAGGCCTTCCGCCAGATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCCATCAGGTCTCCGCTaGTACCCGGGTCCACAGATG +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFPSGLR*YPGPQM
Trigger: CATCTGTGGACCCGGGTATCAGCGGAGACCTGATGG...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAAGCTCCCACGGGTGTTaGGGCAGCGCCCATTCTCAC +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGSSHGC*GSAHSH
Trigger: GTGAGAATGGGCGCTGCCTCAACACCCGTGGGAGCT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp CCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAATCCCCGCTGGCATTAGCATTCCGATTTGGTaGCGGGGTTCCTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PRLHSWSRSDQVRIPAGISIPIW*RGSCCW
Trigger: CCAGCAACAGGAACCCCGTCACCAAATCGGAATGCT...AATGCCAGCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGCAGCTGGAGCCGGTCTaGTCAAGTGAGAATCCCCGC +
Preference number: 4 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVQLEPV*SSENPR
Trigger: GCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTG...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCGCTCCTCCGCAGATGTaGGCGCTGAGGCATTCGTTT +
Preference number: 4 (lower is better)
Translates to: AGRMVLGKSGRTFACEAAAPPQM*ALRHSF
Trigger: AAACGAATGCCTCAGCGCTCACATCTGCGGAGGAGC...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTCATCCATTTCACCACTaGCAGGTGGCTCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVHPFHH*QVALGF
Trigger: GAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATG...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATGCCTTCTCCAGGCGCTaGTCCCACTTCAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHAFSRR*SHFRRP
Trigger: GGGCCGCCTGAAGTGGGAGCAGCGCCTGGAGAAGGC...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCCAACTTGGCATAGGGTaGACGGGCTTCCCCACGCAG +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSQLGIG*TGFPTQ
Trigger: CTGCGTGGGGAAGCCCGTGCACCCTATGCCAAGTTG...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGATCCAGGTGGGCAAATaGATCTGTAGGACCCATCCA +
Preference number: 4 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGIQVGK*ICRTHP
Trigger: TGGATGGGTCCTACAGATGCATTTGCCCACCTGGAT...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGCAGTGTTACTGCATGTaGCCAGGGCACAAATTTCTG +
Preference number: 4 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLQCYCM*PGHKFL
Trigger: CAGAAATTTGTGCCCTGGGCACATGCAGTAACACTG...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp CTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGGTTTGGGAGCCTGGTTaGACTCGTTCAGATCTACAC +
Preference number: 4 (lower is better)
Translates to: LGLCGSNQVDSHTGNRPRVWEPG*TRSDLH
Trigger: GTGTAGATCTGAACGAGTGCAACCAGGCTCCCAAAC...CCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGTTTCCTCGGCCCATaGCCATTCCAGAAACACAGT +
Preference number: 4 (lower is better)
Translates to: WTATQVTALGIGTAIAAGGFLGP*PFQKHS
Trigger: ACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACC...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTTCCCAGCCTCCAAATTaGCGTCCGCCCCATGGCTCG +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEASQPPN*RPPHGS
Trigger: CGAGCCATGGGGCGGACGCCAATTTGGAGGCTGGGA...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CATATCTGGCGGAAGGCCTCATCAGGTTCCGTGGGGCAGAGCTCGCAGGGGTCTTGCTGGCTGCACATATaGGTTCCATTGGAACATTCG +
Preference number: 4 (lower is better)
Translates to: HIWRKASSGSVGQSSQGSCWLHI*VPLEHS
Trigger: CGAATGTTCCAATGGAACCCATATGTGCAGCCAGCA...AGACCCCTGCGAGCTCTGCCCCACGGAACCTGATGAGGCCTTCCGCCAGATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GTTCCCGCCGCTTCTGTCCAGTTCGTAGCCTATCTCACACTCACAGCGGAACAGCAGGTAGTAGCCGGTTaGACAGCGGCACTGGAAACT +
Preference number: 4 (lower is better)
Translates to: VPAASVQFVAYLTLTAEQQVVAG*TAALET
Trigger: AGTTTCCAGTGCCGCTGTCCAACCGGCTACTACCTG...CTGTTCCGCTGTGAGTGTGAGATAGGCTACGAACTGGACAGAAGCGGCGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp ATCAGGTCTCCGCTGATACCCGGGTCCACAGATGCACATATATGTGCCAATGAGCCTCATCAGGTTCCGTaGGGCAGAGCTCGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: IRSPLIPGSTDAHICANEPHQVP*GRARRG
Trigger: ACCCCTGCGAGCTCTGCCCCACGGAACCTGATGAGG...CTCATTGGCACATATATGTGCATCTGTGGACCCGGGTATCAGCGGAGACCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CCA 90 bp ACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCATTCCAGAAACACAGTGCCACGTCTTCACAGCTaGAGCCGGTCTGATCAAGTG +
Preference number: 4 (lower is better)
Translates to: TDRWLWVSSAHAHSRNTVPRLHS*SRSDQV
Trigger: CACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG...CACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCCCATGCTGGCAGCGGTaGTTACCCTCACACTCGTCC +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITPCWQR*LPSHSS
Trigger: GGACGAGTGTGAGGGTAACCACCGCTGCCAGCATGG...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGAACCGCCCTCGGTATTaGAACAGCCATAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLNRPRY*NSHSCR
Trigger: CCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTT...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCACTGACAGGTGGCTCTaGGTTTCCTCGGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSTDRWL*VSSAHA
Trigger: GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGT...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TACCCTCACACTCGTCCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGATTCACCACTGACAGGTaGCTCTGGGTTTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: YPHTRPRLHSWSRSDQVRFTTDR*LWVSSA
Trigger: GGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAA...TCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGACGAGTGTGAGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCCGAGGGACCGGAATTTaGGGTCCAGGAGGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSRGTGI*GPGGKP
Trigger: TGGCTTTCCTCCTGGACCTCAAATTCCGGTCCCTCG...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTCACACTGGGCCGTTCTaGCACTCGTCAATATCTTCA +
Preference number: 4 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVHTGPF*HSSISS
Trigger: TGAAGATATTGACGAGTGTCAGAACGGCCCAGTGTG...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAACTGTCCTGTGGAGGTaGAGCGGTAGCCGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGTVLWR*SGSRAY
Trigger: GTAAGCCCGGCTACCGCTTCACCTCCACAGGACAGT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTGATTGCAGCGGCAGTTaGAGGAACCAATTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVDCSGS*RNQLCS
Trigger: GGAACACAATTGGTTCCTTCAACTGCCGCTGCAATC...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCGATTGCAGCGGCAGTTaGAGGAACCAATTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRDCSGS*RNQLCS
Trigger: GGAACACAATTGGTTCCTTCAACTGCCGCTGCAATC...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTGACCCATCCAAGTTTTaGCAGGTACCTGGTGCACAT +
Preference number: 4 (lower is better)
Translates to: LAYAEVTRWTATQVTALGDPSKF*QVPGAH
Trigger: ATGTGCACCAGGTACCTGTCAAAACTTGGATGGGTC...ACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp GGAGGTGAAGCGGTAGCCGGGCTTACAGTCACAGCGGTAGCTGCCTGCAGTGTTGTCCATATCAACTGCTaGATCATCAGGTCCCACGAT +
Preference number: 4 (lower is better)
Translates to: GGEAVAGLTVTAVAACSVVHINC*IIRSHD
Trigger: ATCGTGGGACCTGATGATTCAGCAGTTGATATGGAC...AACACTGCAGGCAGCTACCGCTGTGACTGTAAGCCCGGCTACCGCTTCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGCTGCTCCATTGGTCATaGATCCTCGGCCATGGGGAC +
Preference number: 4 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVLLHWS*ILGHGD
Trigger: GTCCCCATGGCCGAGGATTCATGACCAATGGAGCAG...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGGCCGGTCTGATCAAGTaGGAATCCCCGCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVAGLIK*ESPLAF
Trigger: GAATGCCAGCGGGGATTCTCACTTGATCAGACCGGC...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTCAGCTGGAGCCGGTCTaGTCAAGTGAGAATCCCCGC +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLQLEPV*SSENPR
Trigger: GCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTG...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCACCTGTAGCCCCCAATaGTGTTCTGGCAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: AGRMVLGKSGRTFACEAATCSPQ*CSGSHA
Trigger: AGCATGGCTGCCAGAACATCATTGGGGGCTACAGGT...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTCGCAGATGTGAGCGCTaGGGCATTCGTTTTCATCAA +
Preference number: 4 (lower is better)
Translates to: LAYAEVTRWTATQVTALGRRCER*GIRFHQ
Trigger: TTGATGAAAACGAATGCCTCAGCGCTCACATCTGCG...ACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTCGCAGATGTGAGCGCTaGGGCATTCGTTTTCATCAA +
Preference number: 4 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVRRCER*GIRFHQ
Trigger: TTGATGAAAACGAATGCCTCAGCGCTCACATCTGCG...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTAGCCTCTGGGGAGAGTaGATTGTCATCCATTTCACC +
Preference number: 4 (lower is better)
Translates to: LAYAEVTRWTATQVTALGSLWGE*IVIHFT
Trigger: GGTGAAATGGATGACAATTCACTCTCCCCAGAGGCT...ACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TACCCTCACACTCGTCCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGACCCGATTGTCCTGGGTaGGAAGAAGCAAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: YPHTRPRLHSWSRSDQVRPDCPG*EEARGE
Trigger: TTCCCCTCTTGCTTCTTCTCACCCAGGACAATCGGG...TCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGACGAGTGTGAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp AACACAGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTACCCGATTGTCCTGGGTaGGAAGAAGCAAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: NTVPLAYAEVTRWTATQVPDCPG*EEARGE
Trigger: TTCCCCTCTTGCTTCTTCTCACCCAGGACAATCGGG...TACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp TACCCTCACACTCGTCCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGATGCTTCTCCGTTTCCTaGCCCGTTTGGGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: YPHTRPRLHSWSRSDQVRCFSVS*PVWGSH
Trigger: ATGGCTACCCCAAACGGGGCAGGAAACGGAGAAGCA...TCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGACGAGTGTGAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CCATTTAACCACGTCCTCTCCTTTGGGGCAGAAATCTCTGGGAGTAGGGGCAAGCACCGCCTCTTCTCTTaGCCCGACTGGCTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: PFNHVLSFGAEISGSRGKHRLFS*PDWLWF
Trigger: AAACCAGAGCCAGTCGGGCCAAGAGAAGAGGCGGTG...CTTGCCCCTACTCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGTTAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTAGGCTCGGCCGACTGTaGCACAGCAGAGCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFRLGRL*HSRAFL
Trigger: CAAAAACGCTCTGCTGTGCCACAGTCGGCCGAGCCT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCATGGACTGTGGCAGCTaGTTAGAGCAGCGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSMDCGS*LEQRPF
Trigger: AAACGGGCGCTGCTCTAACCAGCTGCCACAGTCCAT...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCGGGGTGTTCACACACTaGCCTCTGCCACAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITGVFTH*PLPQRS
Trigger: TGACCTCTGTGGCAGAGGCCAGTGTGTGAACACCCC...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTACACGCGGAGATGTTaGGGGACAGCTGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSYTRRC*GTADGQ
Trigger: CTGGCCATCAGCTGTCCCCCAACATCTCCGCGTGTA...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCCAGGTAGTAGCCGGTTaGACAGCGGCACTGGAAACT +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSQVVAG*TAALET
Trigger: AGTTTCCAGTGCCGCTGTCCAACCGGCTACTACCTG...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAGTTGCGCTGGCACACTaGGCCGTTCTGACACTCGTC +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGVALAH*AVLTLV
Trigger: GACGAGTGTCAGAACGGCCCAGTGTGCCAGCGCAAC...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCACAGGTCCTCCCATCTaGAGCCACCTCATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSTGPPI*SHLIAF
Trigger: GAAGGCTATGAGGTGGCTCCAGATGGGAGGACCTGT...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCTCATTCGCAAATCTTaGCACCTTCTTCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGLIRKS*HLLPLE
Trigger: CTCCAGTGGAAGAAGGTGCCAAGATTTGCGAATGAG...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TTCACATGTCATCATTGGACCGGGCTCAAATCCCTCCTCGCAGGTGCATTCAAACCTCATCAGGTTCCGTaGGGCAGAGCTCGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: FTCHHWTGLKSLLAGAFKPHQVP*GRARRG
Trigger: ACCCCTGCGAGCTCTGCCCCACGGAACCTGATGAGG...TTTGAATGCACCTGCGAGGAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp CTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTTCACATGTCATCATTaGACCGGGCTCAAATCCCTC +
Preference number: 4 (lower is better)
Translates to: LGLCGSNQVDSHTGNRPRFTCHH*TGLKSL
Trigger: GAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA...CCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp AACACAGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTACGGGGTTCCTGTTGCTaGAGCCGATCTGACACATGT +
Preference number: 4 (lower is better)
Translates to: NTVPLAYAEVTRWTATQVRGSCC*SRSDTC
Trigger: ACATGTGTCAGATCGGCTCCAGCAACAGGAACCCCG...TACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAATCCCCGCTGGCATTAAAGCCACAGTCCCCTaGAAAGGGCAGATCTCACAG +
Preference number: 4 (lower is better)
Translates to: PRLHSWSRSDQVRIPAGIKATVP*KGQISQ
Trigger: CTGTGAGATCTGCCCTTTCCAGGGGACTGTGGCTTT...AATGCCAGCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGCAGGACGTATGGTGTTaGGTAAATCCGGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: WTATQVTALGIGTAIAAGQDVWC*VNPGGH
Trigger: ATGTCCTCCCGGATTTACCCAACACCATACGTCCTG...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGCTGAACTGTTCATACTaGAAGCCGGCGGGACACATG +
Preference number: 4 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLLNCSY*KPAGHM
Trigger: CATGTGTCCCGCCGGCTTCCAGTATGAACAGTTCAG...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCGCGGAAGTAACCAGGTaGACAGCCACACAGGTAACC +
Preference number: 4 (lower is better)
Translates to: AGRMVLGKSGRTFACEAAAEVTR*TATQVT
Trigger: GGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGC...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTTTCCCGTACGTTTGCTaGAAGGATGGCATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVFPYVC*KDGMSA
Trigger: TGCTGACATGCCATCCTTCCAGCAAACGTACGGGAA...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CCA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCGCACTGGTGATCCTCTaGCCACTGAGGCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHAALVIL*PLRLFP
Trigger: AGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGC...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTGTGATTGCCTCCAAATaGCTACAGGATGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVVIASK*LQDDGG
Trigger: CCCACCATCATCCTGTAGCCATTTGGAGGCAATCAC...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR CAA 72 bp CCACAGGGAGAGTCATCCTGCCCGTTGTTCTGGATCTaGAAACTTGGGAGACCCACACCAAAGGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: PQGESSCPLFWI*KLGRPTPKEGT
Trigger: GGTTCCCTCCTTTGGTGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACGGGCAGGATGACTCTCCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR TCA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTGACGCCCTCGACGCATaGTGCCGAGCCGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRIDALDA*CRAATG
Trigger: GCCGGTGGCGGCTCGGCATCATGCGTCGAGGGCGTC...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR TCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGCAGACAATCCCGCTaGGTTGTCCCTGGCACATCT +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSCRQSR*VVPGTS
Trigger: AGATGTGCCAGGGACAACTCAGCGGGATTGTCTGCA...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTAGCTGCCTGCAGTGTTaGTGCATTCGGCGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SSILEASVSFVLLRFLPRSCLQC*CIRRCA
Trigger: AGCGCAACGCCGAATGCATCAACACTGCAGGCAGCT...ACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGCTAGAAGACATTCATTaGTATCCACACAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGLCGSNQVDSHTGNRPRLEDIH*YPHRSS
Trigger: GGAGGACCTGTGTGGATATCAATGAATGTCTTCTAG...CCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTCTGGACACAGACATTTaGAGCTGCCTTCAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: LAYAEVTRWTATQVTALGLDTDI*SCLQCY
Trigger: GTAACACTGAAGGCAGCTTCAAATGTCTGTGTCCAG...ACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGATCCCTGGCTTCGTCTaGCATTCATTCTCATCTACA +
Preference number: 4 (lower is better)
Translates to: LGLCGSNQVDSHTGNRPRIPGFV*HSFSST
Trigger: TGTAGATGAGAATGAATGTCAGACGAAGCCAGGGAT...CCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGAGCTCCCACGGGTGTTaGGGCAGCGCCCATTCTCAC +
Preference number: 4 (lower is better)
Translates to: CLRLILDIGGISFVCASPSSHGC*GSAHSH
Trigger: GTGAGAATGGGCGCTGCCTCAACACCCGTGGGAGCT...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGAGCATTCCGATTTGGTaGCGGGGTTCCTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMSIPIW*RGSCCW
Trigger: CCAGCAACAGGAACCCCGTCACCAAATCGGAATGCT...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTGGGGACAGAGTTTCTTaGAAGCCACAGTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFGDRVS*KPQSPG
Trigger: TCCAGGGGACTGTGGCTTTCAAGAAACTCTGTCCCC...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp TACCCTCACACTCGTCCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAGCTGGCATTCACAGGTaGAGCTTCCAGGAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: YPHTRPRLHSWSRSDQVRAGIHR*SFQECS
Trigger: AGAACACTCCTGGAAGCTTCACCTGTGAATGCCAGC...TCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGACGAGTGTGAGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACCTGTAGCCCCCAATaGTGTTCTGGCAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITTCSPQ*CSGSHA
Trigger: AGCATGGCTGCCAGAACATCATTGGGGGCTACAGGT...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGACCTGTAGCCCCCAATaGTGTTCTGGCAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVTCSPQ*CSGSHA
Trigger: AGCATGGCTGCCAGAACATCATTGGGGGCTACAGGT...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CTCGTCCTGGTTGGGGCTGGCGGTAAACCCATCATTACACTCACAGGTGTAGCTCATCCATTTCACCACTaGCAGGTGGCTCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LVLVGAGGKPIITLTGVAHPFHH*QVALGF
Trigger: GAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATG...AGCTACACCTGTGAGTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR TCA 90 bp ACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCATTCCAGAAACACAGTGCAACCGCTTTTGCTGTaGTTGCCTCCAAATGGCTAC +
Preference number: 4 (lower is better)
Translates to: TDRWLWVSSAHAHSRNTVQPLLL*LPPNGY
Trigger: GTAGCCATTTGGAGGCAATCACAGCAAAAGCGGTTG...CACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR GCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCGCTGGAACCCTTTGTTaGACTCACACCGGTAACTCC +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSAGTLC*THTGNS
Trigger: GGAGTTACCGGTGTGAGTGCAACAAAGGGTTCCAGC...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTGCGGTATCCTCCTGGTaGATTGAGGCACTGGCCATT +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFAVSSW*IEALAI
Trigger: AATGGCCAGTGCCTCAATGCACCAGGAGGATACCGC...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGATCCCTCCTCGCAGGTaGATTCAAAACCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: WTATQVTALGIGTAIAAGIPPRR*IQNLQS
Trigger: TGATTGGAGGTTTTGAATGCACCTGCGAGGAGGGAT...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp TGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCATCAGCCGGCGGGACACATaGACTTGTAGCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: CKTHIGFCLRLILDIGGISRRDT*TCSSPG
Trigger: CCCTGGGGAGCTACAAGTGCATGTGTCCCGCCGGCT...GATGCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCTCAACATCCCAACTTaGAAGACTCACATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGLNIPT*KTHIGF
Trigger: GAAGCCAATGTGAGTCTTGCAAGTTGGGATGTTGAG...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCACAGGCAACCGCTTTTaGTGTGATTGCCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRTGNRF*CDCLQM
Trigger: CATTTGGAGGCAATCACAGCAAAAGCGGTTGCCTGT...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CCA 90 bp ACCGGTATAAATGTCGATGACAAAGCCTGGCCTTTGACTTCCACAGAGTGTAGCTCCCAGCCTCCAAATTaGCGTCCGCCCCATGGCTCG +
Preference number: 4 (lower is better)
Translates to: TGINVDDKAWPLTSTECSSQPPN*RPPHGS
Trigger: CGAGCCATGGGGCGGACGCCAATTTGGAGGCTGGGA...GCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGTCATCGACATTTATACCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTAGGAACAGGGAGAACTaGAGGAATGGGGCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLRNREN*RNGAKG
Trigger: CCCCTTGGCCCCATTCCTCCAGTTCTCCCTGTTCCT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGATGGCAGCACCCTTGGTaGCTCCCGAGATGGATACAG +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGWQHPW*LPRWIQ
Trigger: CTGTATCCATCTCGGGAGCCACCAAGGGTGCTGCCA...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTTCACGCAACGGCCATTaGGGCACAGGTGTGCACTCA +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEASRNGH*GTGVHS
Trigger: TGAGTGCACACCTGTGCCCCAATGGCCGTTGCGTGA...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GATGCATTCGGCGTTGCGCTGGCACACTGGGCCGTTCTGACACTCGTCAATATCTTGCAGTCTGCATGCTaGCTGCACATATGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: DAFGVALAHWAVLTLVNILQSAC*LHIWVP
Trigger: TGGAACCCATATGTGCAGCCAGCATGCAGACTGCAA...GATATTGACGAGTGTCAGAACGGCCCAGTGTGCCAGCGCAACGCCGAATGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GATGCATTCGGCGTTGCGCTGGCACACTGGGCCGTTCTGACACTCGTCAATATCATACATTTTCCTCCTTaGCACAGCCCTGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: DAFGVALAHWAVLTLVNIIHFPP*HSPGSS
Trigger: GGAGCTACCAGGGCTGTGCCAAGGAGGAAAATGTAT...GATATTGACGAGTGTCAGAACGGCCCAGTGTGCCAGCGCAACGCCGAATGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGAAACTCATCTGTACTTaGGATGGGACACTGTTCACA +
Preference number: 4 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLKLICT*DGTLFT
Trigger: TGTGAACAGTGTCCCATCCCAAGTACAGATGAGTTT...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGTCATTGCACTGGCACTaGAAAGACCCCACTGTATTA +
Preference number: 4 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGSLHWH*KDPTVL
Trigger: TAATACAGTGGGGTCTTTCCAGTGCCAGTGCAATGA...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTTCAAGGCACTCGTCCTaGTTGGGGCTGGCGGTAAAC +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEASRHSS*LGLAVN
Trigger: GTTTACCGCCAGCCCCAACCAGGACGAGTGCCTTGA...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp ATCAGGTCTCCGCTGATACCCGGGTCCACAGATGCACATATATGTGCCAATGAGTCAAGGCACTCGTCCTaGTTGGGGCTGGCGGTAAAC +
Preference number: 4 (lower is better)
Translates to: IRSPLIPGSTDAHICANESRHSS*LGLAVN
Trigger: GTTTACCGCCAGCCCCAACCAGGACGAGTGCCTTGA...CTCATTGGCACATATATGTGCATCTGTGGACCCGGGTATCAGCGGAGACCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGATTCTGGCAGCCATGCTaGCAGCGGTGGTTACCCTCA +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGFWQPC*QRWLPS
Trigger: TGAGGGTAACCACCGCTGCCAGCATGGCTGCCAGAA...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTTTCTGGCAGCCATGCTaGCAGCGGTGGTTACCCTCA +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLFWQPC*QRWLPS
Trigger: TGAGGGTAACCACCGCTGCCAGCATGGCTGCCAGAA...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGCCCCCAATGATGTTCTaGCAGCCATGCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLPPMMF*QPCWQR
Trigger: CCGCTGCCAGCATGGCTGCCAGAACATCATTGGGGG...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCTGAACTGTTCATACTaGAAGCCGGCGGGACACATG +
Preference number: 4 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHALNCSY*KPAGHM
Trigger: CATGTGTCCCGCCGGCTTCCAGTATGAACAGTTCAG...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCGCGGAAGTAACCAGGTaGACAGCCACACAGGTAACC +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITAEVTR*TATQVT
Trigger: GGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGC...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGGCGGAAGTAACCAGGTaGACAGCCACACAGGTAACC +
Preference number: 4 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMAEVTR*TATQVT
Trigger: GGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGC...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTACTGACAGGTGGCTCTaGGTTTCCTCGGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: LDIGGISFVCASPFPAPFTDRWL*VSSAHA
Trigger: GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGT...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTTTCACCACTGACAGGTaGCTCTGGGTTTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLFTTDR*LWVSSA
Trigger: GGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAA...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCATGGCCAACCCCCAATaGAAATACACGTCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRMANPQ*KYTSQF
Trigger: AAACTGGGACGTGTATTTCCATTGGGGGTTGGCCAT...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTGCACTGGTGATCCTCTaGCCACTGAGGCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFALVIL*PLRLFP
Trigger: AGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGC...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCCCTTCCCGATTGTCCTaGGTGAGAAGAAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: AGRMVLGKSGRTFACEAAPSRLS*VRRSKR
Trigger: CCTCTTGCTTCTTCTCACCCAGGACAATCGGGAAGG...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR CAA 72 bp CCAAGGAGTCTTCCACAGGGAGAGTCATCCTGCCCGTaGTTCTGGATCTTGAAACTTGGGAGACCCACACCA +
Preference number: 4 (lower is better)
Translates to: PRSLPQGESSCP*FWILKLGRPTP
Trigger: TGGTGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACGGGCAGGATGACTCTCCCTGTGGAAGACTCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR TCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGACAGGAAGGAGCTATCTaGCCAGATGGGCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGQEGAI*PDGQVH
Trigger: GTGCACTTGCCCATCTGGTCAGATAGCTCCTTCCTG...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACATGCAATTTCCTCCCTaGCAGAGCCCGGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYMQFPP*QSPGMA
Trigger: GGCCATCCCCGGGCTCTGTCAGGGAGGAAATTGCAT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp GTTCCCGCCGCTTCTGTCCAGTTCGTAGCCTATCTCACACTCACAGCGGAACAGGACTGCAGCTACATTTaGAGCTTCCTGCTGTATTGG +
Preference number: 4 (lower is better)
Translates to: VPAASVQFVAYLTLTAEQDCSYI*SFLLYW
Trigger: CCAATACAGCAGGAAGCTTCAAATGTAGCTGCAGTC...CTGTTCCGCTGTGAGTGTGAGATAGGCTACGAACTGGACAGAAGCGGCGGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCCACACTGGGCCGTTCTaGCACTCGTCAATATCTTCA +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSHTGPF*HSSISS
Trigger: TGAAGATATTGACGAGTGTCAGAACGGCCCAGTGTG...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCACACTGGGCCGTTCTaGCACTCGTCAATATCTTCA +
Preference number: 4 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHAHTGPF*HSSISS
Trigger: TGAAGATATTGACGAGTGTCAGAACGGCCCAGTGTG...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCGATTGCAGCGGCAGTTaGAGGAACCAATTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSDCSGS*RNQLCS
Trigger: GGAACACAATTGGTTCCTTCAACTGCCGCTGCAATC...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp ACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCATTCCAGAAACACAGTGGTCCATATCAACTGCTaGATCATCAGGTCCCACGAT +
Preference number: 4 (lower is better)
Translates to: TDRWLWVSSAHAHSRNTVVHINC*IIRSHD
Trigger: ATCGTGGGACCTGATGATTCAGCAGTTGATATGGAC...CACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp ATCAGGTCTCCGCTGATACCCGGGTCCACAGATGCACATATATGTGCCAATGAGTCCTACGGTCTTCTCTaGGCACATATCCCACGGGAC +
Preference number: 4 (lower is better)
Translates to: IRSPLIPGSTDAHICANESYGLL*AHIPRD
Trigger: GTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGA...CTCATTGGCACATATATGTGCATCTGTGGACCCGGGTATCAGCGGAGACCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR TCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCTTGCTGGAGCCGATCTaGCACATGTTTTGTAGCACC +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSLLEPI*HMFCST
Trigger: GGTGCTACAAAACATGTGTCAGATCGGCTCCAGCAA...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCCGCAGATGTGAGCGCTaGGGCATTCGTTTTCATCAA +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSRRCER*GIRFHQ
Trigger: TTGATGAAAACGAATGCCTCAGCGCTCACATCTGCG...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp GGAGGTGAAGCGGTAGCCGGGCTTACAGTCACAGCGGTAGCTGCCTGCAGTGTTCAATTTCACATTCATTaGTGTTGTGGCACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GGEAVAGLTVTAVAACSVQFHIH*CCGTAE
Trigger: CTCTGCTGTGCCACAACATCAATGAATGTGAAATTG...AACACTGCAGGCAGCTACCGCTGTGACTGTAAGCCCGGCTACCGCTTCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp CAGATCTTCAGCCACAGAATTAAATCCCCACGTCCTTTATATACAGGAGCAATCGCCTTCTCCAGGCGCTaGTCCCACTTCAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: QIFSHRIKSPRPLYTGAIAFSRR*SHFRRP
Trigger: GGGCCGCCTGAAGTGGGAGCAGCGCCTGGAGAAGGC...GATTGCTCCTGTATATAAAGGACGTGGGGATTTAATTCTGTGGCTGAAGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTCGCAACGCCCATTCATaGAGATCCCAGGGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEARNAHS*RSQGFH
Trigger: GTGAAACCCCTGGGATCTGCATGAATGGGCGTTGCG...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCAGCCTTCGTCACACTTaGATTCAAAGTCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSSLRHT*IQSPQG
Trigger: CCCCTGGGGACTTTGAATGCAAGTGTGACGAAGGCT...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCACTCATCGATGTCGGTaGATGATCTCTGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSTHRCR*MISGQA
Trigger: TGCCTGACCAGAGATCATGCACCGACATCGATGAGT...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp CTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTGCACTGCCCATGACTaGATATATTGGGGATTTCTT +
Preference number: 4 (lower is better)
Translates to: LGLCGSNQVDSHTGNRPRCTAHD*IYWGFL
Trigger: AAGAAATCCCCAATATATGCAGTCATGGGCAGTGCA...CCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGCAGTGTTACTGCATGTaGCCAGGGCACAAATTTCTG +
Preference number: 4 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLQCYCM*PGHKFL
Trigger: CAGAAATTTGTGCCCTGGGCACATGCAGTAACACTG...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCACTCATCCTCATCTTTaGACATCCTACGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRTHPHL*TSYGLL
Trigger: GAGAAGACCGTAGGATGTGCAAAGATGAGGATGAGT...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGATGCTTCTCCGTTTCCTaGCCCGTTTGGGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGCFSVS*PVWGSH
Trigger: ATGGCTACCCCAAACGGGGCAGGAAACGGAGAAGCA...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp TCATTGATGTCTTGGCATCCTCCACTGAACTGTTCATACTGGAAGCCGGCGGGATGCTTCTCCGTTTCCTaGCCCGTTTGGGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: SLMSWHPPLNCSYWKPAGCFSVS*PVWGSH
Trigger: ATGGCTACCCCAAACGGGGCAGGAAACGGAGAAGCA...TCCCGCCGGCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAGACATCAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp AACACAGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTACATCAGTTTCGTTTGTaGTTCTCCGTTTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: NTVPLAYAEVTRWTATQVHQFRL*FSVSCP
Trigger: GGGGCAGGAAACGGAGAAGCACAAACGAAACTGATG...TACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp TACCCTCACACTCGTCCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGACATCAGTTTCGTTTGTaGTTCTCCGTTTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: YPHTRPRLHSWSRSDQVRHQFRL*FSVSCP
Trigger: GGGGCAGGAAACGGAGAAGCACAAACGAAACTGATG...TCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGACGAGTGTGAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCTGCTGTGATGAAGGATaGACTGGTGATCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITCCDEG*TGDPLA
Trigger: GGCCAGAGGATCACCAGTGCATCCTTCATCACAGCA...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGTATCTTAGTGTGCAGTaGTCCTTCACATGTCATCAT +
Preference number: 4 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLYLSVQ*SFTCHH
Trigger: ATGATGACATGTGAAGGAGCACTGCACACTAAGATA...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTTACTGGCAGCACCCTTaGTGGCTCCCGAGATGGATA +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLYWQHP*WLPRWI
Trigger: TATCCATCTCGGGAGCCACCAAGGGTGCTGCCAGTA...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCGTTGGACAGCGGCACTaGAAACTCCCAAAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITVGQRH*KLPKVL
Trigger: CAACACCTTTGGGAGTTTCCAGTGCCGCTGTCCAAC...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGCACTTGCATGTAGTCTaGAGGACAGATACAGGTGTA +
Preference number: 4 (lower is better)
Translates to: WTATQVTALGIGTAIAAGHLHVV*RTDTGV
Trigger: TACACCTGTATCTGTCCTCCAGACTACATGCAAGTG...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTATTTTCACAGACCCCTaGGATCTCCCGGCACTCATC +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFIFTDP*DLPALI
Trigger: GATGAGTGCCGGGAGATCCCAGGGGTCTGTGAAAAT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp AGGGAGCACTCATCAATATCTTCACAGGCTTTCCCGTCAGCACTGGGCACGAAGATTTTCACAGACCCCTaGGATCTCCCGGCACTCATC +
Preference number: 4 (lower is better)
Translates to: REHSSISSQAFPSALGTKIFTDP*DLPALI
Trigger: GATGAGTGCCGGGAGATCCCAGGGGTCTGTGAAAAT...CTTCGTGCCCAGTGCTGACGGGAAAGCCTGTGAAGATATTGATGAGTGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCGGCACCTTCTTCCACTaGAGGACAAGGAAAACCCTT +
Preference number: 4 (lower is better)
Translates to: AGRMVLGKSGRTFACEAAGTFFH*RTRKTL
Trigger: AAGGGTTTTCCTTGTCCTCCAGTGGAAGAAGGTGCC...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCAAAGCCACAGTCCCCTaGAAAGGGCAGATCTCACAG +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITKATVP*KGQISQ
Trigger: CTGTGAGATCTGCCCTTTCCAGGGGACTGTGGCTTT...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCAGGGTTTGGGAGCCTaGTTGCACTCGTTCAGATCT +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFQGLGA*LHSFRS
Trigger: AGATCTGAACGAGTGCAACCAGGCTCCCAAACCCTG...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCTTCCAGGAGTGTTCTaGCAAATGCCCTTAGACCCG +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFLPGVF*QMPLDP
Trigger: CGGGTCTAAGGGCATTTGCCAGAACACTCCTGGAAG...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGCCATGCTGGCAGCGGTaGTTACCCTCACACTCGTCC +
Preference number: 4 (lower is better)
Translates to: CLRLILDIGGISFVCASPPCWQR*LPSHSS
Trigger: GGACGAGTGTGAGGGTAACCACCGCTGCCAGCATGG...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCCTGAACTGTTCATACTaGAAGCCGGCGGGACACATG +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSLNCSY*KPAGHM
Trigger: CATGTGTCCCGCCGGCTTCCAGTATGAACAGTTCAG...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCCTTCCCGATTGTCCTaGGTGAGAAGAAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFPSRLS*VRRSKR
Trigger: CCTCTTGCTTCTTCTCACCCAGGACAATCGGGAAGG...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
3UTR CAA 72 bp CAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTaGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: QTDPRYWRHQFR*CFSVSCPVWGS
Trigger: GCTACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCACAGGTTGTCCACAGTaGGTCCCTATGTATCCTTTC +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSTGCPQ*VPMYPF
Trigger: GAAAGGATACATAGGGACTCACTGTGGACAACCTGT...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCCATCTCGTGTAACATaGAAGCCCGCATTACACACG +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFPSRVT*KPALHT
Trigger: CGTGTGTAATGCGGGCTTTCATGTTACACGAGATGG...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGCAATAACGTCCATCTaGTGCCAGCTGGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLAITSI*CQLESR
Trigger: CCTGGATTCCAGCTGGCATCAGATGGACGTTATTGC...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTATTCCACTGGGACACTaGCACTTGAATGACCCCCTA +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFIPLGH*HLNDPL
Trigger: TAGGGGGTCATTCAAGTGTCAGTGTCCCAGTGGAAT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTACAAAGCCTGGCCTTTaGCTTCCACAGAGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFTKPGL*LPQSVA
Trigger: TGCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCCGGTATAAATGTCGATaGCAAAGCCTGGCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: AGRMVLGKSGRTFACEAARYKCR*QSLAFD
Trigger: GTCAAAGGCCAGGCTTTGTCATCGACATTTATACCG...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTACTGTCCTGTGGAGGTaGAGCGGTAGCCGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPTVLWR*SGSRAY
Trigger: GTAAGCCCGGCTACCGCTTCACCTCCACAGGACAGT...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCTGTTGTGAGAAAGGATaGAACCATGATTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSCCEKG*NHDCSG
Trigger: GCCGCTGCAATCATGGTTTCATCCTTTCTCACAACA...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp CCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAATCCCCGCTGGCATTCTAGAAGACATTCATTaGTATCCACACAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PRLHSWSRSDQVRIPAGILEDIH*YPHRSS
Trigger: GGAGGACCTGTGTGGATATCAATGAATGTCTTCTAG...AATGCCAGCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGGACCCATCCAAGTTTTaGCAGGTACCTGGTGCACAT +
Preference number: 4 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVDPSKF*QVPGAH
Trigger: ATGTGCACCAGGTACCTGTCAAAACTTGGATGGGTC...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp ACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCATTCCAGAAACACAGTGTCACACTTCTCATTTTaGAGACTGTATCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TDRWLWVSSAHAHSRNTVSHFSF*RLYPGG
Trigger: CCCACCTGGATACAGTCTTCAAAATGAGAAGTGTGA...CACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCAGGAACCATCTGTATTaGTGCACTGTCCATGTTTAC +
Preference number: 4 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRRNHLY*CTVHVY
Trigger: GTAAACATGGACAGTGCATCAATACAGATGGTTCCT...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCCATCAGGTCTCCGCTaGTACCCGGGTCCACAGATG +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPPSGLR*YPGPQM
Trigger: CATCTGTGGACCCGGGTATCAGCGGAGACCTGATGG...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGCTGGCATTCACAGGTaGAGCTTCCAGGAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEAAGIHR*SFQECS
Trigger: AGAACACTCCTGGAAGCTTCACCTGTGAATGCCAGC...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp ACTTGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCGCCGGTCTGATCAAGTaGGAATCCCCGCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: TCKTHIGFCLRLILDIGGAGLIK*ESPLAF
Trigger: GAATGCCAGCGGGGATTCTCACTTGATCAGACCGGC...GCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCCTTGGCATCCTCCACTaGACTGTTCATACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITLGILH*TVHTGS
Trigger: GCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAG...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTAGCCTCTGGGGAGAGTaGATTGTCATCCATTTCACC +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFSLWGE*IVIHFT
Trigger: GGTGAAATGGATGACAATTCACTCTCCCCAGAGGCT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp CCATTTAACCACGTCCTCTCCTTTGGGGCAGAAATCTCTGGGAGTAGGGGCAAGGGCATGGGAAGCCAGTaGAATGGTCAGTTGCATGTA +
Preference number: 4 (lower is better)
Translates to: PFNHVLSFGAEISGSRGKGMGSQ*NGQLHV
Trigger: TACATGCAACTGACCATTTCACTGGCTTCCCATGCC...CTTGCCCCTACTCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGTTAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTGGCCGCTACAGCCACTaGTCGGCTCCGCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRIGRYSH*SAPLAA
Trigger: AGCTGCGAGCGGAGCCGAGCAGTGGCTGTAGCGGCC...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCAAATCCGTAAGTGCATaGACATCGATTTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSKSVSA*TSIWGH
Trigger: GTGGCCCCAAATCGATGTGCATGCACTTACGGATTT...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCCTGGGCGAACATCTATaGATCTGGTACCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSLGEHL*IWYHLE
Trigger: CTCCAGATGGTACCAGATGCATAGATGTTCGCCCAG...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCCATCAATGACAGTCTaGCAGCAAGTGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFPSMTV*QQVPLM
Trigger: CATCAAGGGCACTTGCTGGCAGACTGTCATTGATGG...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTAGTCTGCATGCTGGCTaGACATATGGGTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFSLHAG*TYGFHW
Trigger: CCAATGGAACCCATATGTGCAGCCAGCATGCAGACT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCCTCATAGCCTTCATTaGACTGGCACTGGAAAGACC +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFPHSLH*TGTGKT
Trigger: GGTCTTTCCAGTGCCAGTGCAATGAAGGCTATGAGG...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCATCCCTCCTCGCAGGTaGATTCAAAACCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: AGRMVLGKSGRTFACEAAIPPRR*IQNLQS
Trigger: TGATTGGAGGTTTTGAATGCACCTGCGAGGAGGGAT...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp GATGCATTCGGCGTTGCGCTGGCACACTGGGCCGTTCTGACACTCGTCAATATCACTCATCCTCATCTTTaGACATCCTACGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: DAFGVALAHWAVLTLVNITHPHL*TSYGLL
Trigger: GAGAAGACCGTAGGATGTGCAAAGATGAGGATGAGT...GATATTGACGAGTGTCAGAACGGCCCAGTGTGCCAGCGCAACGCCGAATGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCGTTTGGGAGCCTGGTTaGACTCGTTCAGATCTACAC +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSVWEPG*TRSDLH
Trigger: GTGTAGATCTGAACGAGTGCAACCAGGCTCCCAAAC...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGGTTTGGGAGCCTGGTTaGACTCGTTCAGATCTACAC +
Preference number: 4 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVVWEPG*TRSDLH
Trigger: GTGTAGATCTGAACGAGTGCAACCAGGCTCCCAAAC...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp CTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGGTTGTGTTGCTTGGTTaGACACTCATCAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: LGLCGSNQVDSHTGNRPRVVLLG*TLIKIF
Trigger: AAAGATCTTGATGAGTGTGCAACCAAGCAACACAAC...CCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTTTCCTCGGCCCATaGCCATTCCAGAAACACAGT +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLGFLGP*PFQKHS
Trigger: ACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACC...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp TCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTGGTTTCCTCGGCCCATaGCCATTCCAGAAACACAGT +
Preference number: 4 (lower is better)
Translates to: SSILEASVSFVLLRFLPRGFLGP*PFQKHS
Trigger: ACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACC...ACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCCTCCCAGACCTCTATaGACGTGTGGGCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPPPRPL*TCGPVT
Trigger: GGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp CCATTTAACCACGTCCTCTCCTTTGGGGCAGAAATCTCTGGGAGTAGGGGCAAGTCGCCTCCCAAAATCTaGCTCAACAATGGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: PFNHVLSFGAEISGSRGKSPPKI*LNNGPR
Trigger: TCTTGGGCCATTGTTGAGGCAGATTTTGGGAGGCGA...CTTGCCCCTACTCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGTTAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCGTGGGTATCTTAGTGTaGAGTGCTCCTTCACATGTC +
Preference number: 4 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHAVGILV*SAPSHV
Trigger: GACATGTGAAGGAGCACTGCACACTAAGATACCCAC...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CCA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCGGCTGCTCCCAGTCGTaGCCGCTACAGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRGCSQS*PLQPLL
Trigger: GAGCAGTGGCTGTAGCGGCCACGACTGGGAGCAGCC...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp CAGATCTTCAGCCACAGAATTAAATCCCCACGTCCTTTATATACAGGAGCAATCGGCTGCTCCCAGTCGTaGCCGCTACAGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: QIFSHRIKSPRPLYTGAIGCSQS*PLQPLL
Trigger: GAGCAGTGGCTGTAGCGGCCACGACTGGGAGCAGCC...GATTGCTCCTGTATATAAAGGACGTGGGGATTTAATTCTGTGGCTGAAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGATTCTCTTGGCCCGACTaGCTCTGGTTTCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGFSWPD*LWFPSR
Trigger: ACGTGAAGGAAACCAGAGCCAGTCGGGCCAAGAGAA...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TTCACATGTCATCATTGGACCGGGCTCAAATCCCTCCTCGCAGGTGCATTCAAAGCATGCACATCGATTTaGGGCCACACACCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FTCHHWTGLKSLLAGAFKACTSI*GHTPSS
Trigger: GGAGGAAGGTGTGTGGCCCCAAATCGATGTGCATGC...TTTGAATGCACCTGCGAGGAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGCCACGGAGGTCCAGCTaGAACCCTTTGTTGCACTCA +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLPRRSS*NPLLHS
Trigger: TGAGTGCAACAAAGGGTTCCAGCTGGACCTCCGTGG...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGAGGGAGGAGCAGCACTaGGACTTTAAGGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLREEQH*DFKVAP
Trigger: TGGAGCCACCTTAAAGTCCCAGTGCTGCTCCTCCCT...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGTTTCTGCACTTGCCGTaGGTGCAGAGGCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLFLHLP*VQRLGI
Trigger: GATACCCAGCCTCTGCACCCACGGCAAGTGCAGAAA...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCCTTCCCTCTGTGTTATaGCAAACACCACCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSLPSVL*QTPPRH
Trigger: ATGCCGAGGTGGTGTTTGCCATAACACAGAGGGAAG...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GCACTGTCCATGTTTACAGACATCGGGTTCTTTGCATTCGTCCATATCAACTGCCTTTCCCGTCAGCACTaGGCACGAAGCCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: ALSMFTDIGFFAFVHINCLSRQH*ARSPCR
Trigger: GCGACATGGGCTTCGTGCCCAGTGCTGACGGGAAAG...GCAGTTGATATGGACGAATGCAAAGAACCCGATGTCTGTAAACATGGACAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGAACGGTGATAGGATTTaGTCGGAAACCTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMNGDRI*SETFPS
Trigger: GGAGGGGAAGGTTTCCGACCAAATCCTATCACCGTT...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGCAGGTAGTAGCCGGTTaGACAGCGGCACTGGAAACT +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLQVVAG*TAALET
Trigger: AGTTTCCAGTGCCGCTGTCCAACCGGCTACTACCTG...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCGTCGATGACAAAGCCTaGCCTTTGACTTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITVDDKA*PLTSTE
Trigger: CTCTGTGGAAGTCAAAGGCCAGGCTTTGTCATCGAC...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGGTCGATGACAAAGCCTaGCCTTTGACTTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVVDDKA*PLTSTE
Trigger: CTCTGTGGAAGTCAAAGGCCAGGCTTTGTCATCGAC...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGTAGGACCCATCCAAGTTTTGACAGGTACCTGGTGCACATTTTCTGGGTTCTAGTTGCGCTGGCACACTaGGCCGTTCTGACACTCGTC +
Preference number: 4 (lower is better)
Translates to: CRTHPSFDRYLVHIFWVLVALAH*AVLTLV
Trigger: GACGAGTGTCAGAACGGCCCAGTGTGCCAGCGCAAC...TAGAACCCAGAAAATGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGACAGGTCCTCCCATCTaGAGCCACCTCATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLTGPPI*SHLIAF
Trigger: GAAGGCTATGAGGTGGCTCCAGATGGGAGGACCTGT...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGGTTTTGACAGGTACCTaGTGCACATTTTCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLVLTGT*CTFSGF
Trigger: GAACCCAGAAAATGTGCACCAGGTACCTGTCAAAAC...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCGGCACCTTCTTCCACTaGAGGACAAGGAAAACCCTT +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSGTFFH*RTRKTL
Trigger: AAGGGTTTTCCTTGTCCTCCAGTGGAAGAAGGTGCC...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTCAGGGTTTGGGAGCCTaGTTGCACTCGTTCAGATCT +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLQGLGA*LHSFRS
Trigger: AGATCTGAACGAGTGCAACCAGGCTCCCAAACCCTG...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTCTTCCAGGAGTGTTCTaGCAAATGCCCTTAGACCCG +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEALPGVF*QMPLDP
Trigger: CGGGTCTAAGGGCATTTGCCAGAACACTCCTGGAAG...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTATGGGGACAATACACTaGTTTCCGCCAGGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFMGTIH*FPPGKV
Trigger: AACCTTACCTGGCGGAAATCAGTGTATTGTCCCCAT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp ACCGGTATAAATGTCGATGACAAAGCCTGGCCTTTGACTTCCACAGAGTGTAGCCAGGAAGGAGCTATCTaGCCAGATGGGCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: TGINVDDKAWPLTSTECSQEGAI*PDGQVH
Trigger: GTGCACTTGCCCATCTGGTCAGATAGCTCCTTCCTG...GCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGTCATCGACATTTATACCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp ACACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTTGCAGACAATCCCGCTaGGTTGTCCCTGGCACATCT +
Preference number: 4 (lower is better)
Translates to: TPTPISLLQAVSPLSPRGCRQSR*VVPGTS
Trigger: AGATGTGCCAGGGACAACTCAGCGGGATTGTCTGCA...ACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACAATCCTCGGTTGCTCTaGTGGGACACATCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYNPRLL*WDTSQG
Trigger: CCCCTGAGATGTGTCCCATCAGAGCAACCGAGGATT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTCTGCTGCAGAGTGCCTaGTATTCCGCTGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEALLQSA*YSAEFC
Trigger: ACAGAATTCAGCGGAATATCAGGCACTCTGCAGCAG...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGGCCAGCAAGTGCCCTTaGTGGTTTCTATGCAGATGG +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLASKCP*WFLCRW
Trigger: CCATCTGCATAGAAACCATCAAGGGCACTTGCTGGC...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAACTGATACTTCCCTATaGGGTTCACGCAACGGCCAT +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGTDTSL*GSRNGH
Trigger: ATGGCCGTTGCGTGAACCTCATAGGGAAGTATCAGT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTATCCTCCTGGTGCATTaGGGCACTGGCCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPILLVH*GTGHCH
Trigger: GTGGCAATGGCCAGTGCCTCAATGCACCAGGAGGAT...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp AGAAAGGATGAAACCATGATTGCAGCGGCAGTTGAAGGAACCAATTGTGTTCCGATCCTCCTGGTGCATTaGGGCACTGGCCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: RKDETMIAAAVEGTNCVPILLVH*GTGHCH
Trigger: GTGGCAATGGCCAGTGCCTCAATGCACCAGGAGGAT...CGGAACACAATTGGTTCCTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCAACTCCCAAAGGTGTTaGTACATTTTCCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSNSQRC*YIFLLG
Trigger: GCCAAGGAGGAAAATGTATCAACACCTTTGGGAGTT...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTACAAAGCCTGGCCTTTaGCTTCCACAGAGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLTKPGL*LPQSVA
Trigger: TGCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCCGGTATAAATGTCGATaGCAAAGCCTGGCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITRYKCR*QSLAFD
Trigger: GTCAAAGGCCAGGCTTTGTCATCGACATTTATACCG...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCAGCTGCCAACCATGTTaGTACACACTCCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: AGRMVLGKSGRTFACEAASCQPC*YTLHFH
Trigger: GTGAAAATGGAGTGTGTATCAACATGGTTGGCAGCT...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp GAGGTCGAATATCCAAATAGCAATTTCCAGAGCGGGTATCAACACAGCCAACTCAGCTGCCTGCAGTGTTaGTGCATTCGGCGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: EVEYPNSNFQSGYQHSQLSCLQC*CIRRCA
Trigger: AGCGCAACGCCGAATGCATCAACACTGCAGGCAGCT...GAGTTGGCTGTGTTGATACCCGCTCTGGAAATTGCTATTTGGATATTCGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp GCGCCCATTCTCACAGATCCCTGGCTTCGTCTGACATTCATTCTCATCTACACACATCAGGTCCCACGATaGTCCCACTTCCATAAGGAC +
Preference number: 4 (lower is better)
Translates to: APILTDPWLRLTFILIYTHQVPR*SHFHKD
Trigger: GTCCTTATGGAAGTGGGATCATCGTGGGACCTGATG...TGTGTAGATGAGAATGAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR TCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTGTCCATATCAACTGCTaGATCATCAGGTCCCACGAT +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFVHINC*IIRSHD
Trigger: ATCGTGGGACCTGATGATTCAGCAGTTGATATGGAC...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp CTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGACATTTGCATTCATATaGCCCATAAGTGTTCACACA +
Preference number: 4 (lower is better)
Translates to: LGLCGSNQVDSHTGNRPRTFAFI*PISVHT
Trigger: TGTGTGAACACTTATGGGTCATATGAATGCAAATGT...CCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGACATTTGCATTCATATaGCCCATAAGTGTTCACACA +
Preference number: 4 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGTFAFI*PISVHT
Trigger: TGTGTGAACACTTATGGGTCATATGAATGCAAATGT...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCTCCTACGGTCTTCTCTaGGCACATATCCCACGGGAC +
Preference number: 4 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFSYGLL*AHIPRD
Trigger: GTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGA...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp CTCGTCCTGGTTGGGGCTGGCGGTAAACCCATCATTACACTCACAGGTGTAGCTATCCCTGGCTTCGTCTaGCATTCATTCTCATCTACA +
Preference number: 4 (lower is better)
Translates to: LVLVGAGGKPIITLTGVAIPGFV*HSFSST
Trigger: TGTAGATGAGAATGAATGTCAGACGAAGCCAGGGAT...AGCTACACCTGTGAGTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR TCA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGACAAATGCAATGATATaGTCCTCTGTCATTGACACA +
Preference number: 4 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGTNAMI*SSVIDT
Trigger: TGTGTCAATGACAGAGGATCATATCATTGCATTTGT...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCCACCCAGTTCACCACTaGGGTAGTCTTTGTCATATT +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSHPVHH*GSLCHI
Trigger: AATATGACAAAGACTACCTCAGTGGTGAACTGGGTG...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp CAAACTTCTTCTCATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCGGCCGCTACAGCCACTaGTCGGCTCCGCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: QTSSHIHAIISPIHLHVVGRYSH*SAPLAA
Trigger: AGCTGCGAGCGGAGCCGAGCAGTGGCTGTAGCGGCC...GACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATGAGAAGAAGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAGACCAGATGGGCAAGTaGACATATTTGGCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGDQMGK*TYLASN
Trigger: GTTCGAGGCCAAATATGTGCACTTGCCCATCTGGTC...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGGCAAGGTTCCCCAAATaGATACTCAGTGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLARFPK*ILSAGA
Trigger: TGCGCCAGCACTGAGTATGCATTTGGGGAACCTTGC...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCGGTATTCTTGCAGTCTaGATGCTGGCTGCACATATG +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSGILAV*MLAAHM
Trigger: CATATGTGCAGCCAGCATGCAGACTGCAAGAATACC...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTATCCAGGTGGGCAAATaGATCTGTAGGACCCATCCA +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLIQVGK*ICRTHP
Trigger: TGGATGGGTCCTACAGATGCATTTGCCCACCTGGAT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAATCCAGGTGGGCAAATaGATCTGTAGGACCCATCCA +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGIQVGK*ICRTHP
Trigger: TGGATGGGTCCTACAGATGCATTTGCCCACCTGGAT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCAACTGGCAGTTGTGTTaGTTGGTTGCACACTCATCA +
Preference number: 4 (lower is better)
Translates to: AGRMVLGKSGRTFACEAANWQLC*LVAHSS
Trigger: TGATGAGTGTGCAACCAAGCAACACAACTGCCAGTT...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCCTCAACATCCCAACTTaGAAGACTCACATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSLNIPT*KTHIGF
Trigger: GAAGCCAATGTGAGTCTTGCAAGTTGGGATGTTGAG...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCAGCCCCCAGGAGGTCTTaGCAAGGAGTCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPAPRRS*QGVFHR
Trigger: CCTGTGGAAGACTCCTTGGCAAGACCTCCTGGGGGC...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp GCACTGTCCATGTTTACAGACATCGGGTTCTTTGCATTCGTCCATATCAACTGCCACCGCCTCTTCTCTTaGCCCGACTGGCTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ALSMFTDIGFFAFVHINCHRLFS*PDWLWF
Trigger: AAACCAGAGCCAGTCGGGCCAAGAGAAGAGGCGGTG...GCAGTTGATATGGACGAATGCAAAGAACCCGATGTCTGTAAACATGGACAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTAGTGTTGTATGGATCTaGAGCCACAGGAAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFSVVWI*SHRKEL
Trigger: TAGCTCCTTCCTGTGGCTCCAGATCCATACAACACT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCCCGCTGAGTTGTCCCTaGCACATCTGGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFPLSCP*HIWLLI
Trigger: GATCAGCAACCAGATGTGCCAGGGACAACTCAGCGG...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTATACAGATATTCCACTaGTGGTCGAGGGACCGGAAT +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFIQIFH*WSRDRN
Trigger: ATTCCGGTCCCTCGACCACCAGTGGAATATCTGTAT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTATCAGTAACGTTTACTaGCAGCACCCTTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLISNVY*QHPWWL
Trigger: GAGCCACCAAGGGTGCTGCCAGTAAACGTTACTGAT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCCCATCTGATGCCAGCTaGAATCCAGGTTTGCAAATA +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSPSDAS*NPGLQI
Trigger: TATTTGCAAACCTGGATTCCAGCTGGCATCAGATGG...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCGACAGATCCTTCCTGTaGCATCCAAAGTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSDRSFL*HPKSFH
Trigger: GTGGAATGACTTTGGATGCCACAGGAAGGATCTGTC...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCTCGGTGCATGATCTCTaGTCAGGCATTAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSSVHDL*SGISAN
Trigger: ATTTGCACTAATGCCTGACCAGAGATCATGCACCGA...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTATACATTTTCCTCCTTaGCACAGCCCTGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLIHFPP*HSPGSS
Trigger: GGAGCTACCAGGGCTGTGCCAAGGAGGAAAATGTAT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCACTTGCATGTAGTCTaGAGGACAGATACAGGTGTA +
Preference number: 4 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHAHLHVV*RTDTGV
Trigger: TACACCTGTATCTGTCCTCCAGACTACATGCAAGTG...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTCATCTGTACTTGGGATaGGACACTGTTCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLHLYLG*DTVHRA
Trigger: AGCCCTGTGAACAGTGTCCCATCCCAAGTACAGATG...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTCATCTGTACTTGGGATaGGACACTGTTCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGHLYLG*DTVHRA
Trigger: AGCCCTGTGAACAGTGTCCCATCCCAAGTACAGATG...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTCATCTGTACTTGGGATaGGACACTGTTCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: SSILEASVSFVLLRFLPRHLYLG*DTVHRA
Trigger: AGCCCTGTGAACAGTGTCCCATCCCAAGTACAGATG...ACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCTCATTGCACTGGCACTaGAAAGACCCCACTGTATTA +
Preference number: 4 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHASLHWH*KDPTVL
Trigger: TAATACAGTGGGGTCTTTCCAGTGCCAGTGCAATGA...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGACAGGTCCTCCCATCTaGAGCCACCTCATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: CLRLILDIGGISFVCASPTGPPI*SHLIAF
Trigger: GAAGGCTATGAGGTGGCTCCAGATGGGAGGACCTGT...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCCAGGGCACAAATTTCTaGCTCTTCGACACACTCATC +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITQGTNF*LFDTLI
Trigger: GATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTG...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACCGGGGTTCCTGTTGCTaGAGCCGATCTGACACATGT +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYRGSCC*SRSDTC
Trigger: ACATGTGTCAGATCGGCTCCAGCAACAGGAACCCCG...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCATGAATCCTCGGCCATaGGGACAGAGTTTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHAMNPRP*GQSFLK
Trigger: TTTCAAGAAACTCTGTCCCCATGGCCGAGGATTCAT...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CTCGTCCTGGTTGGGGCTGGCGGTAAACCCATCATTACACTCACAGGTGTAGCTATGAATCCTCGGCCATaGGGACAGAGTTTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: LVLVGAGGKPIITLTGVAMNPRP*GQSFLK
Trigger: TTTCAAGAAACTCTGTCCCCATGGCCGAGGATTCAT...AGCTACACCTGTGAGTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCGGCAGTTGTGTTGCTTaGTTGCACACTCATCAAGAT +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSGSCVA*LHTHQD
Trigger: ATCTTGATGAGTGTGCAACCAAGCAACACAACTGCC...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGTCAATGCAGGACGTATaGTGTTGGGTAAATCCGGGA +
Preference number: 4 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVSMQDV*CWVNPG
Trigger: TCCCGGATTTACCCAACACCATACGTCCTGCATTGA...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp ATCAGGTCTCCGCTGATACCCGGGTCCACAGATGCACATATATGTGCCAATGAGAGTGAGAATCCCCGCTaGCATTCACAGGTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: IRSPLIPGSTDAHICANESENPR*HSQVKL
Trigger: AAGCTTCACCTGTGAATGCCAGCGGGGATTCTCACT...CTCATTGGCACATATATGTGCATCTGTGGACCCGGGTATCAGCGGAGACCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACCCACGTCTTCACAGCTaGAGCCGGTCTGATCAAGTG +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYPRLHS*SRSDQV
Trigger: CACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACAACCGCCCTCGGTATTaGAACAGCCATAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYNRPRY*NSHSCR
Trigger: CCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCATTCACCACTGACAGGTaGCTCTGGGTTTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPFTTDR*LWVSSA
Trigger: GGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAA...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTACCTCTATGCACGTGTaGGCCAGTCACCGAAATTTC +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLTSMHV*ASHRNF
Trigger: GAAATTTCGGTGACTGGCCCACACGTGCATAGAGGT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR CAA 72 bp CTGGAGGACAAGGAAAACCCTTCTGGACACAGACATTaGAAGCTGCCTTCAGTGTTACTGCATGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LEDKENPSGHRH*KLPSVLLHVPR
Trigger: CCTGGGCACATGCAGTAACACTGAAGGCAGCTTCAAATGTCTGTGTCCAGAAGGGTTTTCCTTGTCCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
3UTR CAA 72 bp AAAAGAGAAAGGATGACGTCAAGGCACTCGTCCTGGTaGGGGCTGGCGGTAAACCCATCATTACACTCACAG +
Preference number: 4 (lower is better)
Translates to: KRERMTSRHSSW*GLAVNPSLHSQ
Trigger: CTGTGAGTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAGTGCCTTGACGTCATCCTTTCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR TCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGACACACCTTCCTCCATTaGGACAGCCACTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGHTFLH*DSHFHK
Trigger: TTTGTGAAAGTGGCTGTCTCAATGGAGGAAGGTGTG...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCTGTCTTCAGATGCCATaGATCCATCATAACACAAGC +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSCLQMP*IHHNTS
Trigger: GCTTGTGTTATGATGGATTCATGGCATCTGAAGACA...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp CACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTCCACACTGGGCCGTTCTaGCACTCGTCAATATCTTCA +
Preference number: 4 (lower is better)
Translates to: HQLQFHCCRLYLHCLLEVHTGPF*HSSISS
Trigger: TGAAGATATTGACGAGTGTCAGAACGGCCCAGTGTG...GACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp TCATTGATGTCTTGGCATCCTCCACTGAACTGTTCATACTGGAAGCCGGCGGGAGAAAGGATGAAACCATaGTTGCAGCGGCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SLMSWHPPLNCSYWKPAGERMKP*LQRQLK
Trigger: CTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTC...TCCCGCCGGCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAGACATCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TTCACATGTCATCATTGGACCGGGCTCAAATCCCTCCTCGCAGGTGCATTCAAAGACCCATCCAAGTTTTaGCAGGTACCTGGTGCACAT +
Preference number: 4 (lower is better)
Translates to: FTCHHWTGLKSLLAGAFKDPSKF*QVPGAH
Trigger: ATGTGCACCAGGTACCTGTCAAAACTTGGATGGGTC...TTTGAATGCACCTGCGAGGAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGTCACACTTCTCATTTTaGAGACTGTATCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMSHFSF*RLYPGG
Trigger: CCCACCTGGATACAGTCTTCAAAATGAGAAGTGTGA...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAGCTCCTTCCATCCCATCAGGTCCCACGATaGTCCCACTTCCATAAGGAC +
Preference number: 4 (lower is better)
Translates to: QLCCLVAHSSRSLQLLPSHQVPR*SHFHKD
Trigger: GTCCTTATGGAAGTGGGATCATCGTGGGACCTGATG...GGATGGAAGGAGCTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTCCATATCAACTGCTaGATCATCAGGTCCCACGAT +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEAVHINC*IIRSHD
Trigger: ATCGTGGGACCTGATGATTCAGCAGTTGATATGGAC...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTTTGCTGGAGCCGATCTaGCACATGTTTTGTAGCACC +
Preference number: 4 (lower is better)
Translates to: LDIGGISFVCASPFPAPFLLEPI*HMFCST
Trigger: GGTGCTACAAAACATGTGTCAGATCGGCTCCAGCAA...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CATTCATTGTTATCAATGCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATCTGCTCCATTGGTCATaGATCCTCGGCCATGGGGAC +
Preference number: 4 (lower is better)
Translates to: HSLLSMQDVWCWVNPGGHLLHWS*ILGHGD
Trigger: GTCCCCATGGCCGAGGATTCATGACCAATGGAGCAG...ATGTCCTCCCGGATTTACCCAACACCATACGTCCTGCATTGATAACAATGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp AACACAGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTATTTCGGCAAACATCGTaGATAACCTTGCATTCATCG +
Preference number: 4 (lower is better)
Translates to: NTVPLAYAEVTRWTATQVFRQTS*ITLHSS
Trigger: CGATGAATGCAAGGTTATTCACGATGTTTGCCGAAA...TACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCATCGTAGCCTTTCGGGCATaGACACTGGTAACTCCCTTC +
Preference number: 4 (lower is better)
Translates to: CKTHIGFCLRLILDIGGIVAFRA*TLVTPF
Trigger: GAAGGGAGTTACCAGTGTTCATGCCCGAAAGGCTAC...GATGCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAGCTCCTTCCATCCGCTGGCATTCACAGGTaGAGCTTCCAGGAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: QLCCLVAHSSRSLQLLPSAGIHR*SFQECS
Trigger: AGAACACTCCTGGAAGCTTCACCTGTGAATGCCAGC...GGATGGAAGGAGCTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGAGCCTCTGGGGAGAGTaGATTGTCATCCATTTCACC +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLSLWGE*IVIHFT
Trigger: GGTGAAATGGATGACAATTCACTCTCCCCAGAGGCT...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACCCATCCCCACAGGAATaGCGGCAAATGGGGACAATA +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYPSPQE*RQMGTI
Trigger: TATTGTCCCCATTTGCCGGCATTCCTGTGGGGATGG...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTTGCAGCGTCCATTATTaGAGATCCGGCCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLCSVHY*RSGHSV
Trigger: TACAGAATGGCCGGATCTGCAATAATGGACGCTGCA...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGTCATTCCTGGCCCACTaGTGCAGAGTGCCTGATATT +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLSFLAH*CRVPDI
Trigger: AATATCAGGCACTCTGCAGCAGTGGGCCAGGAATGA...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TGTAGGACCCATCCAAGTTTTGACAGGTACCTGGTGCACATTTTCTGGGTTCTAGCGGTATCCTCCTGGTaGATTGAGGCACTGGCCATT +
Preference number: 4 (lower is better)
Translates to: CRTHPSFDRYLVHIFWVLAVSSW*IEALAI
Trigger: AATGGCCAGTGCCTCAATGCACCAGGAGGATACCGC...TAGAACCCAGAAAATGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCAGACATCGGGTTCTTTaGATTCGTCCATATCAACTG +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSRHRVL*IRPYQL
Trigger: CAGTTGATATGGACGAATGCAAAGAACCCGATGTCT...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp TACCCTCACACTCGTCCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAATCCCACGGGACATTTaGATTCATATGACCCATAAG +
Preference number: 4 (lower is better)
Translates to: YPHTRPRLHSWSRSDQVRIPRDI*IHMTHK
Trigger: CTTATGGGTCATATGAATGCAAATGTCCCGTGGGAT...TCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGACGAGTGTGAGGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTACATTCCCGTACGTTTaGTGGAAGGATGGCATGTCA +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLTFPYV*WKDGMS
Trigger: TGACATGCCATCCTTCCAGCAAACGTACGGGAATGT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTTCCCAGCCTCCAAATTaGCGTCCGCCCCATGGCTCG +
Preference number: 4 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRISQPPN*RPPHGS
Trigger: CGAGCCATGGGGCGGACGCCAATTTGGAGGCTGGGA...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCATGGCCCGACTGGCTCTaGTTTCCTTCACGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPWPDWL*FPSRSQ
Trigger: CTGGGAACGTGAAGGAAACCAGAGCCAGTCGGGCCA...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCTGTCCCTGGCACATCTaGTTGCTGATCACAGTAAAA +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITCPWHI*LLITVK
Trigger: TTTTACTGTGATCAGCAACCAGATGTGCCAGGGACA...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGTGGTGGCTCCCGAGATaGATACAGATATTCCACTGG +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLWWLPR*IQIFHW
Trigger: CCAGTGGAATATCTGTATCCATCTCGGGAGCCACCA...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGCATATGGGATCAACTTaGCATAGGGTGCACGGGCTT +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLHMGST*HRVHGL
Trigger: AAGCCCGTGCACCCTATGCCAAGTTGATCCCATATG...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTACCCTTTACCACATATaGGATCAACTTGGCATAGGG +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFTLYHI*DQLGIG
Trigger: CCCTATGCCAAGTTGATCCCATATGTGGTAAAGGGT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTTGCTGGCTGCACATATaGGTTCCATTGGAACATTCG +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEACWLHI*VPLEHS
Trigger: CGAATGTTCCAATGGAACCCATATGTGCAGCCAGCA...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTACTGATGCACGTGGTTaGATCCAGGCATTCATTCAC +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLTDARG*IQAFIH
Trigger: GTGAATGAATGCCTGGATCCAACCACGTGCATCAGT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTATACATTTTCCTCCTTaGCACAGCCCTGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LDIGGISFVCASPFPAPFIHFPP*HSPGSS
Trigger: GGAGCTACCAGGGCTGTGCCAAGGAGGAAAATGTAT...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CCA 90 bp CAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAGCTCCTTCCATCCATTTTCACAGACCCCTaGGATCTCCCGGCACTCATC +
Preference number: 4 (lower is better)
Translates to: QLCCLVAHSSRSLQLLPSIFTDP*DLPALI
Trigger: GATGAGTGCCGGGAGATCCCAGGGGTCTGTGAAAAT...GGATGGAAGGAGCTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTTCATTGCACTGGCACTaGAAAGACCCCACTGTATTA +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFSLHWH*KDPTVL
Trigger: TAATACAGTGGGGTCTTTCCAGTGCCAGTGCAATGA...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTCAGGGCACAAATTTCTaGCTCTTCGACACACTCATC +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEAQGTNF*LFDTLI
Trigger: GATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTG...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCAAGGAAAACCCTTCTaGACACAGACATTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHAQGKPF*TQTFEA
Trigger: AGCTTCAAATGTCTGTGTCCAGAAGGGTTTTCCTTG...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCAGCAGCATTCCTGCTTaGAGTGATTTCTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITSSIPA*SDFWIW
Trigger: CCAAATCCAGAAATCACTCCAAGCAGGAATGCTGCT...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGAGCAGCATTCCTGCTTaGAGTGATTTCTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVSSIPA*SDFWIW
Trigger: CCAAATCCAGAAATCACTCCAAGCAGGAATGCTGCT...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp AACACAGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAATTCTCACAGATCCCTaGCTTCGTCTGACATTCATT +
Preference number: 4 (lower is better)
Translates to: NTVPLAYAEVTRWTATQVILTDP*LRLTFI
Trigger: AATGAATGTCAGACGAAGCCAGGGATCTGTGAGAAT...TACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCGGGGTTCCTGTTGCTaGAGCCGATCTGACACATGT +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPRGSCC*SRSDTC
Trigger: ACATGTGTCAGATCGGCTCCAGCAACAGGAACCCCG...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGAGTCCCAGTTATATCTaGAGTGTACCCAGTTTTACA +
Preference number: 4 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLSPSYI*SVPSFT
Trigger: TGTAAAACTGGGTACACTCCAGATATAACTGGGACT...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGCTTCCAGGAGTGTTCTaGCAAATGCCCTTAGACCCG +
Preference number: 4 (lower is better)
Translates to: CLRLILDIGGISFVCASPLPGVF*QMPLDP
Trigger: CGGGTCTAAGGGCATTTGCCAGAACACTCCTGGAAG...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCACTGATCCTCGATATTaGAGGCATCAGTTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: AGRMVLGKSGRTFACEAATDPRY*RHQFRL
Trigger: CAAACGAAACTGATGCCTCCAATATCGAGGATCAGT...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGGTTGCTGCCACCAACTaGGCATCAGGCAGACTCGGG +
Preference number: 4 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKEVAATN*ASGRLG
Trigger: CCCGAGTCTGCCTGATGCCCAGTTGGTGGCAGCAAC...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR CAA 72 bp CAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTaGCATGTGAAGCCGCCAATGGTGTTAACACATAGG +
Preference number: 4 (lower is better)
Translates to: QDVWCWVNPGGH*HVKPPMVLTHR
Trigger: CCTATGTGTTAACACCATTGGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp ACACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTTTCTGGCATAGACAGTaGTCGTCACTGCAGCTACCT +
Preference number: 4 (lower is better)
Translates to: TPTPISLLQAVSPLSPRGFWHRQ*SSLQLP
Trigger: AGGTAGCTGCAGTGACGATCACTGTCTATGCCAGAA...ACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAACACTGACACTTGAATaGCCCCCTAGTGTTAACACA +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGTLTLE*PPSVNT
Trigger: TGTGTTAACACTAGGGGGTCATTCAAGTGTCAGTGT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp CACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTCCAAGGTCTGTACAAGTaGAGCCATCACCTGTGTATC +
Preference number: 4 (lower is better)
Translates to: HQLQFHCCRLYLHCLLEVQGLYK*SHHLCI
Trigger: GATACACAGGTGATGGCTTCACTTGTACAGACCTTG...GACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATACAAAGCCTGGCCTTTaGCTTCCACAGAGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHTKPGL*LPQSVA
Trigger: TGCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGT...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537463.6
ENST00000674301.1
CDS-3UTR TCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAAGCTGCCAACCATGTTaGTACACACTCCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGSCQPC*YTLHFH
Trigger: GTGAAAATGGAGTGTGTATCAACATGGTTGGCAGCT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTTGTTGTGAGAAAGGATaGAACCATGATTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LDIGGISFVCASPFPAPFCCEKG*NHDCSG
Trigger: GCCGCTGCAATCATGGTTTCATCCTTTCTCACAACA...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTCATTCCTGCTTGGAGTaGTTTCTGGATTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGHSCLE*FLDLGD
Trigger: ATCACCCAAATCCAGAAATCACTCCAAGCAGGAATG...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAGCTCCTTCCATCCTTTGTAGCACCTCTGTaGAGCAGTACCCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: QLCCLVAHSSRSLQLLPSFVAPL*SSTLPD
Trigger: ATCGGGAAGGGTACTGCTTCACAGAGGTGCTACAAA...GGATGGAAGGAGCTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACCTTGGCATCCTCCACTaGACTGTTCATACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYLGILH*TVHTGS
Trigger: GCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAG...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGCTTGGCATCCTCCACTaGACTGTTCATACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: CLRLILDIGGISFVCASPLGILH*TVHTGS
Trigger: GCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAG...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCATCCATTTCACCACTaGCAGGTGGCTCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPHPFHH*QVALGF
Trigger: GAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATG...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp ATCAGGTCTCCGCTGATACCCGGGTCCACAGATGCACATATATGTGCCAATGAGGTTTGGGGTAGCCATTaGTCTTACACTCGTAACAAG +
Preference number: 4 (lower is better)
Translates to: IRSPLIPGSTDAHICANEVWGSH*SYTRNK
Trigger: CTTGTTACGAGTGTAAGATCAATGGCTACCCCAAAC...CTCATTGGCACATATATGTGCATCTGTGGACCCGGGTATCAGCGGAGACCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR TCA 90 bp CCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAATCCCCGCTGGCATTATCAAGTATCTGTTGTaGTTCGTCAGAGTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: PRLHSWSRSDQVRIPAGIIKYLL*FVRVVR
Trigger: TCTTACAACTCTGACGAATCACAACAGATACTTGAT...AATGCCAGCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CCATTTAACCACGTCCTCTCCTTTGGGGCAGAAATCTCTGGGAGTAGGGGCAAGAGGGAACTGTTCCAGTaGCATAATGAGGTTCTATAC +
Preference number: 4 (lower is better)
Translates to: PFNHVLSFGAEISGSRGKRELFQ*HNEVLY
Trigger: GTATAGAACCTCATTATGTCACTGGAACAGTTCCCT...CTTGCCCCTACTCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGTTAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTGGCCGCTACAGCCACTaGTCGGCTCCGCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCGRYSH*SAPLAA
Trigger: AGCTGCGAGCGGAGCCGAGCAGTGGCTGTAGCGGCC...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGCATCACAGCAGCACTaGATTTTGGTTATGGACTGT +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEAASQQH*ILVMDC
Trigger: ACAGTCCATAACCAAAATGCAGTGCTGCTGTGATGC...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCTACATACAGCATGTTTaGCACAGTTGTGTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITYIQHV*HSCVLQ
Trigger: TTGGAGCACACAACTGTGGCAAACATGCTGTATGTA...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp CACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTCGGTATTCTTGCAGTCTaGATGCTGGCTGCACATATG +
Preference number: 4 (lower is better)
Translates to: HQLQFHCCRLYLHCLLEVGILAV*MLAAHM
Trigger: CATATGTGCAGCCAGCATGCAGACTGCAAGAATACC...GACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACATCCCATGGTATTCTTaGAGTCTGCATGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYIPWYS*SLHAGC
Trigger: GCAGCCAGCATGCAGACTGCAAGAATACCATGGGAT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTTTCCAACTGTGTCAATaGACTGCCCATGACTGCATA +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLFQLCQ*TAHDCI
Trigger: TATGCAGTCATGGGCAGTGCATTGACACAGTTGGAA...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp CAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAGCTCCTTCCATCCCCTCATAGCCTTCATTaGACTGGCACTGGAAAGACC +
Preference number: 4 (lower is better)
Translates to: QLCCLVAHSSRSLQLLPSPHSLH*TGTGKT
Trigger: GGTCTTTCCAGTGCCAGTGCAATGAAGGCTATGAGG...GGATGGAAGGAGCTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGATCCCTCCTCGCAGGTaGATTCAAAACCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLIPPRR*IQNLQS
Trigger: TGATTGGAGGTTTTGAATGCACCTGCGAGGAGGGAT...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCGTTGTGTTGCTTGGTTaGACACTCATCAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSVVLLG*TLIKIF
Trigger: AAAGATCTTGATGAGTGTGCAACCAAGCAACACAAC...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTTTGGCATATTGCACATaGTGTGATGAAGGATGCACT +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFLAYCT*CDEGCT
Trigger: AGTGCATCCTTCATCACAGCATGTGCAATATGCCAA...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTTGGACACTTTTCAGATaGTTATATATTACAGGCAAC +
Preference number: 4 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVWTLFR*LYITGN
Trigger: GTTGCCTGTAATATATAAGCATCTGAAAAGTGTCCA...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CCA 90 bp CATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCTGGAGGACAGATTGGCCCGACTGGCTCTaGTTTCCTTCACGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HIHAIISPIHLHVVWRTDWPDWL*FPSRSQ
Trigger: CTGGGAACGTGAAGGAAACCAGAGCCAGTCGGGCCA...ATCTGTCCTCCAGACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTGCAAGTGCACATATTTaGCCTCGAACAAAATCCATC +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFASAHI*PRTKSI
Trigger: GATGGATTTTGTTCGAGGCCAAATATGTGCACTTGC...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp AGGGAGCACTCATCAATATCTTCACAGGCTTTCCCGTCAGCACTGGGCACGAAGGCAAGTGCACATATTTaGCCTCGAACAAAATCCATC +
Preference number: 4 (lower is better)
Translates to: REHSSISSQAFPSALGTKASAHI*PRTKSI
Trigger: GATGGATTTTGTTCGAGGCCAAATATGTGCACTTGC...CTTCGTGCCCAGTGCTGACGGGAAAGCCTGTGAAGATATTGATGAGTGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGAACATCTATGCATCTaGTACCATCTGGAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLEHLCI*YHLERC
Trigger: ACACCTCTCCAGATGGTACCAGATGCATAGATGTTC...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGACAGGTGTACGAACCCTaGTTGTTAATACACTCACCA +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGQVYEP*LLIHSP
Trigger: TGGTGAGTGTATTAACAACCAGGGTTCGTACACCTG...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGCAGGAGTATTTCTCATaGGACACTCCTCGCATTCCT +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLQEYFS*DTPRIP
Trigger: AGGAATGCGAGGAGTGTCCCATGAGAAATACTCCTG...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCAGCTTCCTGCTGTATTaGTACATACAGCATGTTTGC +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITSFLLY*YIQHVC
Trigger: GCAAACATGCTGTATGTACCAATACAGCAGGAAGCT...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TTCACATGTCATCATTGGACCGGGCTCAAATCCCTCCTCGCAGGTGCATTCAAAACTGATGCACGTGGTTaGATCCAGGCATTCATTCAC +
Preference number: 4 (lower is better)
Translates to: FTCHHWTGLKSLLAGAFKTDARG*IQAFIH
Trigger: GTGAATGAATGCCTGGATCCAACCACGTGCATCAGT...TTTGAATGCACCTGCGAGGAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTACAGCCAACTCGAGTTaGGTTCAGTTCAAAATCAGG +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEATANSS*VQFKIR
Trigger: CCTGATTTTGAACTGAACCCAACTCGAGTTGGCTGT...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACAACGGTGATAGGATTTaGTCGGAAACCTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYNGDRI*SETFPS
Trigger: GGAGGGGAAGGTTTCCGACCAAATCCTATCACCGTT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp ACACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTAACGGTGATAGGATTTaGTCGGAAACCTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: TPTPISLLQAVSPLSPRGNGDRI*SETFPS
Trigger: GGAGGGGAAGGTTTCCGACCAAATCCTATCACCGTT...ACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp CACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTCGTTGTAACATGTCCCTaGACCACAGATTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: HQLQFHCCRLYLHCLLEVVVTCP*TTDSRS
Trigger: ACTCCTGGAATCTGTGGTCCAGGGACATGTTACAAC...GACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGTTGTAACATGTCCCTaGACCACAGATTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LDIGGISFVCASPFPAPFVVTCP*TTDSRS
Trigger: ACTCCTGGAATCTGTGGTCCAGGGACATGTTACAAC...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGACACTTGCATGTAGTCTaGAGGACAGATACAGGTGTA +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGHLHVV*RTDTGV
Trigger: TACACCTGTATCTGTCCTCCAGACTACATGCAAGTG...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp AGGGAGCACTCATCAATATCTTCACAGGCTTTCCCGTCAGCACTGGGCACGAAGAAACTCATCTGTACTTaGGATGGGACACTGTTCACA +
Preference number: 4 (lower is better)
Translates to: REHSSISSQAFPSALGTKKLICT*DGTLFT
Trigger: TGTGAACAGTGTCCCATCCCAAGTACAGATGAGTTT...CTTCGTGCCCAGTGCTGACGGGAAAGCCTGTGAAGATATTGATGAGTGCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp TTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTTTATGTCCAAGCACATaGTTTGGTCATCATTTGTTT +
Preference number: 4 (lower is better)
Translates to: LAYAEVTRWTATQVTALGLCPST*FGHHLF
Trigger: AAACAAATGATGACCAAACCATGTGCTTGGACATAA...ACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCCTGGTGCACATTTTCTaGGTTCTAGAAGACATTCAT +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSLVHIF*VLEDIH
Trigger: ATGAATGTCTTCTAGAACCCAGAAAATGTGCACCAG...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TCATTGATGTCTTGGCATCCTCCACTGAACTGTTCATACTGGAAGCCGGCGGGAGTTTTGACAGGTACCTaGTGCACATTTTCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SLMSWHPPLNCSYWKPAGVLTGT*CTFSGF
Trigger: GAACCCAGAAAATGTGCACCAGGTACCTGTCAAAAC...TCCCGCCGGCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAGACATCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACGGCACCTTCTTCCACTaGAGGACAAGGAAAACCCTT +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYGTFFH*RTRKTL
Trigger: AAGGGTTTTCCTTGTCCTCCAGTGGAAGAAGGTGCC...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp ACACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTGGCACCTTCTTCCACTaGAGGACAAGGAAAACCCTT +
Preference number: 4 (lower is better)
Translates to: TPTPISLLQAVSPLSPRGGTFFH*RTRKTL
Trigger: AAGGGTTTTCCTTGTCCTCCAGTGGAAGAAGGTGCC...ACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGCTCATTCGCAAATCTTaGCACCTTCTTCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLLIRKS*HLLPLE
Trigger: CTCCAGTGGAAGAAGGTGCCAAGATTTGCGAATGAG...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAACCTCATCAGGTTCCGTaGGGCAGAGCTCGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKPHQVP*GRARRG
Trigger: ACCCCTGCGAGCTCTGCCCCACGGAACCTGATGAGG...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TCATTGATGTCTTGGCATCCTCCACTGAACTGTTCATACTGGAAGCCGGCGGGAGGCAGTTGTGTTGCTTaGTTGCACACTCATCAAGAT +
Preference number: 4 (lower is better)
Translates to: SLMSWHPPLNCSYWKPAGGSCVA*LHTHQD
Trigger: ATCTTGATGAGTGTGCAACCAAGCAACACAACTGCC...TCCCGCCGGCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAGACATCAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGCAGGACGTATGGTGTTaGGTAAATCCGGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: CLRLILDIGGISFVCASPQDVWC*VNPGGH
Trigger: ATGTCCTCCCGGATTTACCCAACACCATACGTCCTG...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACAGTGAGAATCCCCGCTaGCATTCACAGGTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYSENPR*HSQVKL
Trigger: AAGCTTCACCTGTGAATGCCAGCGGGGATTCTCACT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGTTGCAAGACTCACATTaGCTTCTGTCTCAGACTGAT +
Preference number: 4 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVLQDSH*LLSQTD
Trigger: ATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCAA...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp ACTTGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCACCTCTATGCACGTGTaGGCCAGTCACCGAAATTTC +
Preference number: 4 (lower is better)
Translates to: TCKTHIGFCLRLILDIGGTSMHV*ASHRNF
Trigger: GAAATTTCGGTGACTGGCCCACACGTGCATAGAGGT...GCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTTACACCTCTATCACATaGTTCCATAGGTGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEAYTSIT*FHRCSV
Trigger: AACGCTGCACCTATGGAACCATGTGATAGAGGTGTA...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CACTTCATAAACTGTGCATCTCCAATCAGAATGGTAAACAGGTTTCACTGTAGTGCTCCTGTCCGCTTGTaGCACCCACAGTCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: HFINCASPIRMVNRFHCSAPVRL*HPQSLP
Trigger: CGGCAGAGACTGTGGGTGCCACAAGCGGACAGGAGC...ACTACAGTGAAACCTGTTTACCATTCTGATTGGAGATGCACAGTTTATGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp CCATTTAACCACGTCCTCTCCTTTGGGGCAGAAATCTCTGGGAGTAGGGGCAAGCACAGCCTAAGTGCTTaGCTCATACAATCATCTTGT +
Preference number: 4 (lower is better)
Translates to: PFNHVLSFGAEISGSRGKHSLSA*LIQSSC
Trigger: ACAAGATGATTGTATGAGCCAAGCACTTAGGCTGTG...CTTGCCCCTACTCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGTTAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR TCA 90 bp CACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTCGTAAGCATTATAACGTaGTCCACAGACATTGGGTCC +
Preference number: 4 (lower is better)
Translates to: HQLQFHCCRLYLHCLLEVVSIIT*STDIGS
Trigger: GGACCCAATGTCTGTGGATCACGTTATAATGCTTAC...GACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTTGCAAAAGTAACTGCTaGCTGTGTTTGTACATTCAC +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFCKSNC*LCLYIH
Trigger: GTGAATGTACAAACACAGTCAGCAGTTACTTTTGCA...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACCAAGGTCTGTACAAGTaGAGCCATCACCTGTGTATC +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYQGLYK*SHHLCI
Trigger: GATACACAGGTGATGGCTTCACTTGTACAGACCTTG...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGGAAAGGATGAAACCATaGTTGCAGCGGCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: CLRLILDIGGISFVCASPERMKP*LQRQLK
Trigger: CTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTC...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TGTAACATGTCCCTGGACCACAGATTCCAGGAGTCTCACATTCATTCACATCATCATCAGGTCCCACGATaGTCCCACTTCCATAAGGAC +
Preference number: 4 (lower is better)
Translates to: CNMSLDHRFQESHIHSHHHQVPR*SHFHKD
Trigger: GTCCTTATGGAAGTGGGATCATCGTGGGACCTGATG...ATGATGTGAATGAATGTGAGACTCCTGGAATCTGTGGTCCAGGGACATGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTAGGAACCATCTGTATTaGTGCACTGTCCATGTTTAC +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLRNHLY*CTVHVY
Trigger: GTAAACATGGACAGTGCATCAATACAGATGGTTCCT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAAGGAACCATCTGTATTaGTGCACTGTCCATGTTTAC +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGRNHLY*CTVHVY
Trigger: GTAAACATGGACAGTGCATCAATACAGATGGTTCCT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGATTTCGGCAAACATCGTaGATAACCTTGCATTCATCG +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGFRQTS*ITLHSS
Trigger: CGATGAATGCAAGGTTATTCACGATGTTTGCCGAAA...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTTTGGTCTCTGGATGGTaGATTAATGAAGCAAAACCT +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFLVSGW*INEAKP
Trigger: AGGTTTTGCTTCATTAATTCACCATCCAGAGACCAA...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp GACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCAATGAGAAAGTGGTTGTTTTaGACTAGGGTAGTCACCTGT +
Preference number: 4 (lower is better)
Translates to: DVWCWVNPGGHLHVKPPMRKWLF*TRVVTC
Trigger: ACAGGTGACTACCCTAGTTCAAAACAACCACTTTCT...CATTGGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR TCA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGGTAAAAGAGAAAGGATaGCGTCAAGGCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: CLRLILDIGGISFVCASPVKEKG*RQGTRP
Trigger: AGGACGAGTGCCTTGACGTCATCCTTTCTCTTTTAC...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCGGTGGGTGGATCGCTTaGGGCCAAGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFGGWIA*GQEFET
Trigger: GGTCTCAAACTCTTGGCCTCAAGCGATCCACCCACC...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp GCACTGTCCATGTTTACAGACATCGGGTTCTTTGCATTCGTCCATATCAACTGCGACCAGATGGGCAAGTaGACATATTTGGCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: ALSMFTDIGFFAFVHINCDQMGK*TYLASN
Trigger: GTTCGAGGCCAAATATGTGCACTTGCCCATCTGGTC...GCAGTTGATATGGACGAATGCAAAGAACCCGATGTCTGTAAACATGGACAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAAGCTACATTCATAGCTaGCTTCAGAGTTTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGSYIHS*LQSLCR
Trigger: TCTGCACAAACTCTGAAGGCAGCTATGAATGTAGCT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCTTTGCCACAGTTGTGTaGTCCAATTTCACATTCATT +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSFATVV*SNFTFI
Trigger: AATGAATGTGAAATTGGAGCACACAACTGTGGCAAA...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCTTCTTGCAGTCTGCATaGTGGCTGCACATATGGGTT +
Preference number: 4 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFFLQSA*WLHIWV
Trigger: AACCCATATGTGCAGCCAGCATGCAGACTGCAAGAA...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATCTGTGTATCCTTCCTTaGACAGACAGCGGTAAGATC +
Preference number: 4 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHLCILP*TDSGKI
Trigger: GATCTTACCGCTGTCTGTGCAAGGAAGGATACACAG...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGATGCACTGCCCATGACTaGATATATTGGGGATTTCTT +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGCTAHD*IYWGFL
Trigger: AAGAAATCCCCAATATATGCAGTCATGGGCAGTGCA...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp GCACTGTCCATGTTTACAGACATCGGGTTCTTTGCATTCGTCCATATCAACTGCCCTCATAGCCTTCATTaGACTGGCACTGGAAAGACC +
Preference number: 4 (lower is better)
Translates to: ALSMFTDIGFFAFVHINCPHSLH*TGTGKT
Trigger: GGTCTTTCCAGTGCCAGTGCAATGAAGGCTATGAGG...GCAGTTGATATGGACGAATGCAAAGAACCCGATGTCTGTAAACATGGACAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATCAGTGTTACTGCATGTaGCCAGGGCACAAATTTCTG +
Preference number: 4 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHQCYCM*PGHKFL
Trigger: CAGAAATTTGTGCCCTGGGCACATGCAGTAACACTG...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537463.6
ENST00000674301.1
CDS-3UTR GCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTATCCCACGGGACATTTaGATTCATATGACCCATAAG +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLIPRDI*IHMTHK
Trigger: CTTATGGGTCATATGAATGCAAATGTCCCGTGGGAT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTACTCATCAAGATCTTTaGAGCTCCTTCCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLTHQDL*SSFHPL
Trigger: AAGAGGATGGAAGGAGCTGCAAAGATCTTGATGAGT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACACATTCCCGTACGTTTaGTGGAAGGATGGCATGTCA +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYTFPYV*WKDGMS
Trigger: TGACATGCCATCCTTCCAGCAAACGTACGGGAATGT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCGTAATCTTGGCATATTaGACATGCTGTGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITVILAY*TCCDEG
Trigger: TCCTTCATCACAGCATGTGCAATATGCCAAGATTAC...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTGTAATCTTGGCATATTaGACATGCTGTGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFVILAY*TCCDEG
Trigger: TCCTTCATCACAGCATGTGCAATATGCCAAGATTAC...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTCTAGCACCTCTAAGGTaGCCCCAGGAGGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRILAPLR*PQEVLP
Trigger: TGGCAAGACCTCCTGGGGGCACCTTAGAGGTGCTAG...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCCAGCAGCCTTACTGCTaGAGTGAAACGGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFQQPYC*SETESP
Trigger: GGGGCTCTCCGTTTCACTGCAGCAGTAAGGCTGCTG...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGCCACAGCAGCCTTACTaGTGCAGTGAAACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKEPQQPY*CSETES
Trigger: GCTCTCCGTTTCACTGCAGCAGTAAGGCTGCTGTGG...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCATTCTCTTGGCCCGACTaGCTCTGGTTTCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPFSWPD*LWFPSR
Trigger: ACGTGAAGGAAACCAGAGCCAGTCGGGCCAAGAGAA...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACTGGGGGAGGATATTCTaGTCTCCCAGGAATTACCAT +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYWGRIF*SPRNYH
Trigger: ATGGTAATTCCTGGGAGACCAGAATATCCTCCCCCA...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGCAGGCGTCCATGCGGTaGCGGCCAGCAATAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQQASMR*RPAIGR
Trigger: CCTGCCTATTGCTGGCCGCCACCGCATGGACGCCTG...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTTTGCAGTCTGCATGCTaGCTGCACATATGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPLQSAC*LHIWVP
Trigger: TGGAACCCATATGTGCAGCCAGCATGCAGACTGCAA...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CATTCATTGTTATCAATGCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATGTTGGACAGCGGCACTaGAAACTCCCAAAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: HSLLSMQDVWCWVNPGGHVGQRH*KLPKVL
Trigger: CAACACCTTTGGGAGTTTCCAGTGCCGCTGTCCAAC...ATGTCCTCCCGGATTTACCCAACACCATACGTCCTGCATTGATAACAATGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CCA 90 bp GAGGTCGAATATCCAAATAGCAATTTCCAGAGCGGGTATCAACACAGCCAACTCCATCTGTACTTGGGATaGGACACTGTTCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: EVEYPNSNFQSGYQHSQLHLYLG*DTVHRA
Trigger: AGCCCTGTGAACAGTGTCCCATCCCAAGTACAGATG...GAGTTGGCTGTGTTGATACCCGCTCTGGAAATTGCTATTTGGATATTCGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTAAACTCATCTGTACTTaGGATGGGACACTGTTCACA +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEAKLICT*DGTLFT
Trigger: TGTGAACAGTGTCCCATCCCAAGTACAGATGAGTTT...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAATAGAAGAATCCCACTaGACATTCACATCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGIEESH*TFTSEA
Trigger: AGCTTCCGATGTGAATGTCCAGTGGGATTCTTCTAT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTATAGAAGAATCCCACTaGACATTCACATCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SSILEASVSFVLLRFLPRIEESH*TFTSEA
Trigger: AGCTTCCGATGTGAATGTCCAGTGGGATTCTTCTAT...ACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCACAGGTCCTCCCATCTaGAGCCACCTCATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRTGPPI*SHLIAF
Trigger: GAAGGCTATGAGGTGGCTCCAGATGGGAGGACCTGT...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCTGGTGCACATTTTCTaGGTTCTAGAAGACATTCAT +
Preference number: 4 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMLVHIF*VLEDIH
Trigger: ATGAATGTCTTCTAGAACCCAGAAAATGTGCACCAG...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp ACTTGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCCTCATTCGCAAATCTTaGCACCTTCTTCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: TCKTHIGFCLRLILDIGGLIRKS*HLLPLE
Trigger: CTCCAGTGGAAGAAGGTGCCAAGATTTGCGAATGAG...GCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTGCTTGGAGTGATTTCTaGATTTGGGTGATGAACACT +
Preference number: 4 (lower is better)
Translates to: SSILEASVSFVLLRFLPRAWSDF*IWVMNT
Trigger: AGTGTTCATCACCCAAATCCAGAAATCACTCCAAGC...ACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CATTCATTGTTATCAATGCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATAAAGCCACAGTCCCCTaGAAAGGGCAGATCTCACAG +
Preference number: 4 (lower is better)
Translates to: HSLLSMQDVWCWVNPGGHKATVP*KGQISQ
Trigger: CTGTGAGATCTGCCCTTTCCAGGGGACTGTGGCTTT...ATGTCCTCCCGGATTTACCCAACACCATACGTCCTGCATTGATAACAATGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCATCTCAATGCAGGACGTATaGTGTTGGGTAAATCCGGGA +
Preference number: 4 (lower is better)
Translates to: CKTHIGFCLRLILDIGGISMQDV*CWVNPG
Trigger: TCCCGGATTTACCCAACACCATACGTCCTGCATTGA...GATGCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTCATTCATTGATGTCTTaGCATCCTCCACTGAACTGT +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEAHSLMS*HPPLNC
Trigger: ACAGTTCAGTGGAGGATGCCAAGACATCAATGAATG...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTACTGATCCTCGATATTaGAGGCATCAGTTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGTDPRY*RHQFRL
Trigger: CAAACGAAACTGATGCCTCCAATATCGAGGATCAGT...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGATTGCAAGACTCACATTaGCTTCTGTCTCAGACTGAT +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGLQDSH*LLSQTD
Trigger: ATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCAA...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGGCATGTCAGCATAAATaGCCAACCCCCAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLACQHK*PTPNGN
Trigger: ATTTCCATTGGGGGTTGGCCATTTATGCTGACATGC...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGCCACGTCCTCTCCTTTaGGGCAGAAATCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKEPRPLL*GRNLWE
Trigger: CTCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGG...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp CCATTTAACCACGTCCTCTCCTTTGGGGCAGAAATCTCTGGGAGTAGGGGCAAGAAATACACAAGAAAATaGTCTCTGAAAGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PFNHVLSFGAEISGSRGKKYTRK*SLKGGR
Trigger: CCTGCCACCTTTCAGAGACCATTTTCTTGTGTATTT...CTTGCCCCTACTCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGTTAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCACTCAAGCCTGTAATTTaGAGAGGCAGAGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPLKPVI*RGRGGW
Trigger: CCACCCACCTCTGCCTCTCCAAATTACAGGCTTGAG...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR TCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACCACCAAACAAAGGTTTaGTACACTGGCCTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYHQTKV*YTGLSC
Trigger: ACAAGAGAGGCCAGTGTATCAAACCTTTGTTTGGTG...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCATTAATGCAAGGACTTaGTTCGCATTCATCAATGTC +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITINART*FAFINV
Trigger: GACATTGATGAATGCGAATCAAGTCCTTGCATTAAT...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTTCTTCTTGGTCATGTTaGATAACAATTCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFSSWSC*ITILHH
Trigger: GTGATGGAGAATTGTTATTCAACATGACCAAGAAGA...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAAGCTGCCTGCAGTGTTaGTGCATTCGGCGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKSCLQC*CIRRCA
Trigger: AGCGCAACGCCGAATGCATCAACACTGCAGGCAGCT...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp ACCGGTATAAATGTCGATGACAAAGCCTGGCCTTTGACTTCCACAGAGTGTAGCCTAGAAGACATTCATTaGTATCCACACAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TGINVDDKAWPLTSTECSLEDIH*YPHRSS
Trigger: GGAGGACCTGTGTGGATATCAATGAATGTCTTCTAG...GCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGTCATCGACATTTATACCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp ACCGGTATAAATGTCGATGACAAAGCCTGGCCTTTGACTTCCACAGAGTGTAGCTCACACTTCTCATTTTaGAGACTGTATCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TGINVDDKAWPLTSTECSSHFSF*RLYPGG
Trigger: CCCACCTGGATACAGTCTTCAAAATGAGAAGTGTGA...GCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGTCATCGACATTTATACCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGACACAGACATTTaGAGCTGCCTTCAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPLDTDI*SCLQCY
Trigger: GTAACACTGAAGGCAGCTTCAAATGTCTGTGTCCAG...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp AACCTTCCCCTCCAGGACAAAGAATTTTGTACTCGGATGTGTTCACAGCAGGACCATTCCTGCTTGGAGTaGTTTCTGGATTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: NLPLQDKEFCTRMCSQQDHSCLE*FLDLGD
Trigger: ATCACCCAAATCCAGAAATCACTCCAAGCAGGAATG...GTCCTGCTGTGAACACATCCGAGTACAAAATTCTTTGTCCTGGAGGGGAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGCACCCAGTTCACCACTaGGGTAGTCTTTGTCATATT +
Preference number: 4 (lower is better)
Translates to: CLRLILDIGGISFVCASPHPVHH*GSLCHI
Trigger: AATATGACAAAGACTACCTCAGTGGTGAACTGGGTG...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR TCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGATTGGTCTCTGGATGGTaGATTAATGAAGCAAAACCT +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGLVSGW*INEAKP
Trigger: AGGTTTTGCTTCATTAATTCACCATCCAGAGACCAA...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTGGGGCTGACATCAGCTaGCCCTGGTTTTGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFGADIS*PWFCLP
Trigger: CGGAAGGCAAAACCAGGGTCAGCTGATGTCAGCCCC...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCACGTTGTTCTGGATCTTaGAACTTGGGAGACCCACAC +
Preference number: 4 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPRCSGS*NLGDPH
Trigger: GTGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACG...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp AGAAAGGATGAAACCATGATTGCAGCGGCAGTTGAAGGAACCAATTGTGTTCCGGACAGTGATCGTCACTaGAGCTACCTCCATTCATAC +
Preference number: 4 (lower is better)
Translates to: RKDETMIAAAVEGTNCVPDSDRH*SYLHSY
Trigger: GTATGAATGGAGGTAGCTGCAGTGACGATCACTGTC...CGGAACACAATTGGTTCCTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCAGATTCCAGGAATGGTaGTGCATTCATCAATATCTT +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITRFQEW*CIHQYL
Trigger: AAGATATTGATGAATGCAGCACCATTCCTGGAATCT...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCCTTCATGTCTTCAGATaGCATGAATCCATCATAACA +
Preference number: 4 (lower is better)
Translates to: WSSQTSMHVWASHRNFITLHVFR*HESIIT
Trigger: TGTTATGATGGATTCATGGCATCTGAAGACATGAAG...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TGTAACATGTCCCTGGACCACAGATTCCAGGAGTCTCACATTCATTCACATCATATCCCATGGTATTCTTaGAGTCTGCATGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CNMSLDHRFQESHIHSHHIPWYS*SLHAGC
Trigger: GCAGCCAGCATGCAGACTGCAAGAATACCATGGGAT...ATGATGTGAATGAATGTGAGACTCCTGGAATCTGTGGTCCAGGGACATGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTATTCATTCACATCTGTaGAGTTCCCGCCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPIHSHL*SSRRFC
Trigger: ACAGAAGCGGCGGGAACTGCACAGATGTGAATGAAT...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TACCCTCACACTCGTCCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGATTCTTCTCATATCCATaGAATTATTTCCCCCATTCA +
Preference number: 4 (lower is better)
Translates to: YPHTRPRLHSWSRSDQVRFFSYP*NYFPHS
Trigger: TGAATGGGGGAAATAATTGCATGGATATGAGAAGAA...TCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGGACGAGTGTGAGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp GCGCCCATTCTCACAGATCCCTGGCTTCGTCTGACATTCATTCTCATCTACACATGCACTGCCCATGACTaGATATATTGGGGATTTCTT +
Preference number: 4 (lower is better)
Translates to: APILTDPWLRLTFILIYTCTAHD*IYWGFL
Trigger: AAGAAATCCCCAATATATGCAGTCATGGGCAGTGCA...TGTGTAGATGAGAATGAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR GCA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCATTCCCATTTCCACTTaGACATTCATCAACATCTAT +
Preference number: 4 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSIPIST*TFINIY
Trigger: ATAGATGTTGATGAATGTGCAAGTGGAAATGGGAAT...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCATTCCCATTTCCACTTaGACATTCATCAACATCTAT +
Preference number: 4 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHAIPIST*TFINIY
Trigger: ATAGATGTTGATGAATGTGCAAGTGGAAATGGGAAT...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp GCGCCCATTCTCACAGATCCCTGGCTTCGTCTGACATTCATTCTCATCTACACAAGACATCGGGTTCTTTaGATTCGTCCATATCAACTG +
Preference number: 4 (lower is better)
Translates to: APILTDPWLRLTFILIYTRHRVL*IRPYQL
Trigger: CAGTTGATATGGACGAATGCAAAGAACCCGATGTCT...TGTGTAGATGAGAATGAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR GCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACACTCATCCTCATCTTTaGACATCCTACGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYTHPHL*TSYGLL
Trigger: GAGAAGACCGTAGGATGTGCAAAGATGAGGATGAGT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTACTCATCAAGATCTTTaGAGCTCCTTCCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: LDIGGISFVCASPFPAPFTHQDL*SSFHPL
Trigger: AAGAGGATGGAAGGAGCTGCAAAGATCTTGATGAGT...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACAACTGGCAGTTGTGTTaGTTGGTTGCACACTCATCA +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYNWQLC*LVAHSS
Trigger: TGATGAGTGTGCAACCAAGCAACACAACTGCCAGTT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp ATCAGGTCTCCGCTGATACCCGGGTCCACAGATGCACATATATGTGCCAATGAGATTCATTGTTATCAATaGAGGACGTATGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: IRSPLIPGSTDAHICANEIHCYQ*RTYGVG
Trigger: CCCAACACCATACGTCCTGCATTGATAACAATGAAT...CTCATTGGCACATATATGTGCATCTGTGGACCCGGGTATCAGCGGAGACCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR GCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATAGCCGGCGGGACACATaGACTTGTAGCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYSRRDT*TCSSPG
Trigger: CCCTGGGGAGCTACAAGTGCATGTGTCCCGCCGGCT...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCCAACCCCAAATCCATaGAAGAACACAAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPPTPNP*KNTKPR
Trigger: CCTTGGCTTTGTGTTCTTGCATGGATTTGGGGTTGG...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTGGTGCTGAAAGTTGCTaGCACCAACTGGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRIGAESC*HQLGIR
Trigger: CCTGATGCCCAGTTGGTGGCAGCAACTTTCAGCACC...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCAGGGAGAAGGAACCAGTaGACAGCAGATACTGATGAG +
Preference number: 4 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPGRRNQ*TADTDE
Trigger: CTCATCAGTATCTGCTGTGCACTGGTTCCTTCTCCC...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp GCACTGTCCATGTTTACAGACATCGGGTTCTTTGCATTCGTCCATATCAACTGCAGTGTTGTATGGATCTaGAGCCACAGGAAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: ALSMFTDIGFFAFVHINCSVVWI*SHRKEL
Trigger: TAGCTCCTTCCTGTGGCTCCAGATCCATACAACACT...GCAGTTGATATGGACGAATGCAAAGAACCCGATGTCTGTAAACATGGACAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGAAAGGTTTGATACACTaGCCTCTCTTGTATCCACCA +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLKGLIH*PLLYPP
Trigger: TGGTGGATACAAGAGAGGCCAGTGTATCAAACCTTT...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACATGCATACTCAGTGCTaGCGCAACAGCATTCAGATT +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYMHTQC*RNSIQI
Trigger: AATCTGAATGCTGTTGCGCCAGCACTGAGTATGCAT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TTCACATGTCATCATTGGACCGGGCTCAAATCCCTCCTCGCAGGTGCATTCAAAAGCTTCCTGCTGTATTaGTACATACAGCATGTTTGC +
Preference number: 4 (lower is better)
Translates to: FTCHHWTGLKSLLAGAFKSFLLY*YIQHVC
Trigger: GCAAACATGCTGTATGTACCAATACAGCAGGAAGCT...TTTGAATGCACCTGCGAGGAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCCACTTGCATGTAGTCTaGAGGACAGATACAGGTGTA +
Preference number: 4 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFHLHVV*RTDTGV
Trigger: TACACCTGTATCTGTCCTCCAGACTACATGCAAGTG...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATTCATTGCACTGGCACTaGAAAGACCCCACTGTATTA +
Preference number: 4 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHSLHWH*KDPTVL
Trigger: TAATACAGTGGGGTCTTTCCAGTGCCAGTGCAATGA...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537463.6
ENST00000674301.1
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGGCTTGGAGTGATTTCTaGATTTGGGTGATGAACACT +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLAWSDF*IWVMNT
Trigger: AGTGTTCATCACCCAAATCCAGAAATCACTCCAAGC...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTCGCTTGGAGTGATTTCTaGATTTGGGTGATGAACACT +
Preference number: 4 (lower is better)
Translates to: HQLQFHCCRLYLHCLLEVAWSDF*IWVMNT
Trigger: AGTGTTCATCACCCAAATCCAGAAATCACTCCAAGC...GACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGATTCTCACAGATCCCTaGCTTCGTCTGACATTCATT +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLILTDP*LRLTFI
Trigger: AATGAATGTCAGACGAAGCCAGGGATCTGTGAGAAT...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTTTAACACATAGGAACTaGCAGTTGTGTTGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGLTHRN*QLCCLV
Trigger: AACCAAGCAACACAACTGCCAGTTCCTATGTGTTAA...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTTCAATGCAGGACGTATaGTGTTGGGTAAATCCGGGA +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPSMQDV*CWVNPG
Trigger: TCCCGGATTTACCCAACACCATACGTCCTGCATTGA...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp GGATGGACACTTTTCAGATGCTTATATATTACAGGCAACCGCTTTTGCTGTGATAACCGCCCTCGGTATTaGAACAGCCATAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GWTLFRCLYITGNRFCCDNRPRY*NSHSCR
Trigger: CCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTT...ATCACAGCAAAAGCGGTTGCCTGTAATATATAAGCATCTGAAAAGTGTCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGACTGATCCTCGATATTaGAGGCATCAGTTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLTDPRY*RHQFRL
Trigger: CAAACGAAACTGATGCCTCCAATATCGAGGATCAGT...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGCTGATCCCTTCCTTTTaGTTGATTTTAAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVLIPSF*LILKKP
Trigger: TGGCTTCTTTAAAATCAACCAAAAGGAAGGGATCAG...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAGCTCCTTCCATCCGCATGTCAGCATAAATaGCCAACCCCCAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: QLCCLVAHSSRSLQLLPSACQHK*PTPNGN
Trigger: ATTTCCATTGGGGGTTGGCCATTTATGCTGACATGC...GGATGGAAGGAGCTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CCA 90 bp CACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTCCATTCATTGATGTTGTaGCACAGCAGAGCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: HQLQFHCCRLYLHCLLEVHSLML*HSRAFL
Trigger: CAAAAACGCTCTGCTGTGCCACAACATCAATGAATG...GACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp CCATTTAACCACGTCCTCTCCTTTGGGGCAGAAATCTCTGGGAGTAGGGGCAAGACATTATCGGAATTCTaGGTTTATTTTCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: PFNHVLSFGAEISGSRGKTLSEF*VYFPRR
Trigger: CCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT...CTTGCCCCTACTCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGTTAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp CAGATCTTCAGCCACAGAATTAAATCCCCACGTCCTTTATATACAGGAGCAATCGAGAGGAAGACAAGCTaGGACTGCACATCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QIFSHRIKSPRPLYTGAIERKTS*DCTSSE
Trigger: CTCACTGGATGTGCAGTCCCAGCTTGTCTTCCTCTC...GATTGCTCCTGTATATAAAGGACGTGGGGATTTAATTCTGTGGCTGAAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR CAA 72 bp GGTGCATTCATTGTTATCAATGCAGGACGTATGGTGTaGGGTAAATCCGGGAGGACATTTGCATGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: GAFIVINAGRMV*GKSGRTFACEA
Trigger: GGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGCATTGATAACAATGAATGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
3UTR CAA 72 bp GGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATaGATGTCAGAGGTGCATTCATTGTTATCAATGCAG +
Preference number: 4 (lower is better)
Translates to: GVFWQMPLDPHR*MSEVHSLLSMQ
Trigger: CTGCATTGATAACAATGAATGCACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAGGCATTCTGTCCGCGTaGGTGTGCTCTGATATCCAG +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKGILSA*VCSDIQ
Trigger: CTGGATATCAGAGCACACTCACGCGGACAGAATGCC...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAACACATCGCCCATCAATaGCAGTCTGCCAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKHIAHQ*QSASKC
Trigger: GCACTTGCTGGCAGACTGTCATTGATGGGCGATGTG...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATATGTTGGGGGACAGCTaGTGGCCAGGCGGGCATTCA +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYMLGDS*WPGGHS
Trigger: TGAATGCCCGCCTGGCCATCAGCTGTCCCCCAACAT...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp GCACTGTCCATGTTTACAGACATCGGGTTCTTTGCATTCGTCCATATCAACTGCAACTCCCAAAGGTGTTaGTACATTTTCCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ALSMFTDIGFFAFVHINCNSQRC*YIFLLG
Trigger: GCCAAGGAGGAAAATGTATCAACACCTTTGGGAGTT...GCAGTTGATATGGACGAATGCAAAGAACCCGATGTCTGTAAACATGGACAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCAAACTCCCAAAGGTGTTaGTACATTTTCCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPNSQRC*YIFLLG
Trigger: GCCAAGGAGGAAAATGTATCAACACCTTTGGGAGTT...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR TCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTTCTTCTTGGTCATGTTaGATAACAATTCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGSSWSC*ITILHH
Trigger: GTGATGGAGAATTGTTATTCAACATGACCAAGAAGA...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TGTAGGACCCATCCAAGTTTTGACAGGTACCTGGTGCACATTTTCTGGGTTCTAAGCTGCCAACCATGTTaGTACACACTCCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: CRTHPSFDRYLVHIFWVLSCQPC*YTLHFH
Trigger: GTGAAAATGGAGTGTGTATCAACATGGTTGGCAGCT...TAGAACCCAGAAAATGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp GTCAGCATAGTAGTTTCTGTAGCACAAACTTCTTCTCATATCCATGCAATTATTACTGTCCTGTGGAGGTaGAGCGGTAGCCGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: VSIVVSVAQTSSHIHAIITVLWR*SGSRAY
Trigger: GTAAGCCCGGCTACCGCTTCACCTCCACAGGACAGT...AATAATTGCATGGATATGAGAAGAAGTTTGTGCTACAGAAACTACTATGCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCGATTGCAGCGGCAGTTaGAGGAACCAATTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRDCSGS*RNQLCS
Trigger: GGAACACAATTGGTTCCTTCAACTGCCGCTGCAATC...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp CATTCATTGTTATCAATGCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTGTTGTGAGAAAGGATaGAACCATGATTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: HSLLSMQDVWCWVNPGGHCCEKG*NHDCSG
Trigger: GCCGCTGCAATCATGGTTTCATCCTTTCTCACAACA...ATGTCCTCCCGGATTTACCCAACACCATACGTCCTGCATTGATAACAATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTAGAAGACATTCATTaGTATCCACACAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPLEDIH*YPHRSS
Trigger: GGAGGACCTGTGTGGATATCAATGAATGTCTTCTAG...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCACATTCCTGCTTGGAGTaGTTTCTGGATTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPHSCLE*FLDLGD
Trigger: ATCACCCAAATCCAGAAATCACTCCAAGCAGGAATG...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAATCCTACGGTCTTCTCTaGGCACATATCCCACGGGAC +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKSYGLL*AHIPRD
Trigger: GTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGA...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTATCCCTGGCTTCGTCTaGCATTCATTCTCATCTACA +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPIPGFV*HSFSST
Trigger: TGTAGATGAGAATGAATGTCAGACGAAGCCAGGGAT...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp CAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAGCTCCTTCCATCCTTTCGGCAAACATCGTaGATAACCTTGCATTCATCG +
Preference number: 4 (lower is better)
Translates to: QLCCLVAHSSRSLQLLPSFRQTS*ITLHSS
Trigger: CGATGAATGCAAGGTTATTCACGATGTTTGCCGAAA...GGATGGAAGGAGCTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTACAAATGCAATGATATaGTCCTCTGTCATTGACACA +
Preference number: 4 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGTNAMI*SSVIDT
Trigger: TGTGTCAATGACAGAGGATCATATCATTGCATTTGT...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTGCCGGTCTGATCAAGTaGGAATCCCCGCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFAGLIK*ESPLAF
Trigger: GAATGCCAGCGGGGATTCTCACTTGATCAGACCGGC...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCAGTTTGGGGTAGCCATTaGTCTTACACTCGTAACAAG +
Preference number: 4 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPVWGSH*SYTRNK
Trigger: CTTGTTACGAGTGTAAGATCAATGGCTACCCCAAAC...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTATCAAGTATCTGTTGTaGTTCGTCAGAGTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLIKYLL*FVRVVR
Trigger: TCTTACAACTCTGACGAATCACAACAGATACTTGAT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp GACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCAATGATCAAGTATCTGTTGTaGTTCGTCAGAGTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: DVWCWVNPGGHLHVKPPMIKYLL*FVRVVR
Trigger: TCTTACAACTCTGACGAATCACAACAGATACTTGAT...CATTGGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAAAGAATCAACACATATaGCAAGGTAGCTTAGCTACA +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGKNQHI*QGSLAT
Trigger: TGTAGCTAAGCTACCTTGTCATATGTGTTGATTCTT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTTTAAAAATATCAAAGTaGTCCACTGTGTGCCAACTC +
Preference number: 4 (lower is better)
Translates to: YCTCCDEGCTGDPLATEALKISK*STVCQL
Trigger: GAGTTGGCACACAGTGGATCACTTTGATATTTTTAA...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGGACAGCCCAGAGAAATaGGACAAATGTCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKEDSPEK*DKCLTR
Trigger: CCTGGTCAGACATTTGTCTCATTTCTCTGGGCTGTC...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR TCA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCAGAACACACTAGTTGGTaGCAGCCCAGAGAAATGAGA +
Preference number: 4 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPEHTSW*QPREMR
Trigger: TCTCATTTCTCTGGGCTGTCACCAACTAGTGTGTTC...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp ACCGGTATAAATGTCGATGACAAAGCCTGGCCTTTGACTTCCACAGAGTGTAGCTACATACAGCATGTTTaGCACAGTTGTGTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: TGINVDDKAWPLTSTECSYIQHV*HSCVLQ
Trigger: TTGGAGCACACAACTGTGGCAAACATGCTGTATGTA...GCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGTCATCGACATTTATACCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGACATTTGAAGCTTCCTaGTGTATTGGTACATACAGC +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLTFEAS*CIGTYS
Trigger: GCTGTATGTACCAATACAGCAGGAAGCTTCAAATGT...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp AACCTTCCCCTCCAGGACAAAGAATTTTGTACTCGGATGTGTTCACAGCAGGACCTCCAATTTCATTGCTaGAGGCTGTATCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: NLPLQDKEFCTRMCSQQDLQFHC*RLYLHC
Trigger: ACAATGGAGATACAGCCTGCAGCAATGAAATTGGAG...GTCCTGCTGTGAACACATCCGAGTACAAAATTCTTTGTCCTGGAGGGGAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACCAACTCCAATTTCATTaGTGCAGGCTGTATCTCCAT +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYQLQFH*CRLYLH
Trigger: ATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTG...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGTTCTTCTCATATCCATaGAATTATTTCCCCCATTCA +
Preference number: 4 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMFFSYP*NYFPHS
Trigger: TGAATGGGGGAAATAATTGCATGGATATGAGAAGAA...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCATCCAGGTGGGCAAATaGATCTGTAGGACCCATCCA +
Preference number: 4 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRIQVGK*ICRTHP
Trigger: TGGATGGGTCCTACAGATGCATTTGCCCACCTGGAT...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp ACACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTAGACATCGGGTTCTTTaGATTCGTCCATATCAACTG +
Preference number: 4 (lower is better)
Translates to: TPTPISLLQAVSPLSPRGRHRVL*IRPYQL
Trigger: CAGTTGATATGGACGAATGCAAAGAACCCGATGTCT...ACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCATCCCACGGGACATTTaGATTCATATGACCCATAAG +
Preference number: 4 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFIPRDI*IHMTHK
Trigger: CTTATGGGTCATATGAATGCAAATGTCCCGTGGGAT...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACACTCATCAAGATCTTTaGAGCTCCTTCCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYTHQDL*SSFHPL
Trigger: AAGAGGATGGAAGGAGCTGCAAAGATCTTGATGAGT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCAAACTGGCAGTTGTGTTaGTTGGTTGCACACTCATCA +
Preference number: 4 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPNWQLC*LVAHSS
Trigger: TGATGAGTGTGCAACCAAGCAACACAACTGCCAGTT...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTGGCCTCACACCTCTCTaGAGATCTTCAGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRIGLTPL*RSSATE
Trigger: TTCTGTGGCTGAAGATCTGCAGAGAGGTGTGAGGCC...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTCAGGGAGAGTCATCCTaGCCGTTGTTCTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRIQGESS*PLFWIL
Trigger: CAAGATCCAGAACAACGGGCAGGATGACTCTCCCTG...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGCTGTGGAACAACTTTTaGTGCCCAGTGGGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKELWNNF*CPVGRE
Trigger: TTCTCTCCCCACTGGGCAGCAAAAGTTGTTCCACAG...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTTGGCCCGACTGGCTCTaGTTTCCTTCACGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGIWPDWL*FPSRSQ
Trigger: CTGGGAACGTGAAGGAAACCAGAGCCAGTCGGGCCA...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTTATTGCAGTGTTGTATaGATCTGGAGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPYCSVV*IWSHRK
Trigger: CTTCCTGTGGCTCCAGATCCATACAACACTGCAATA...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAATTTTTACACACTCCTaGGAACACTTCACATTCATC +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGIFTHS*EHFTFI
Trigger: GATGAATGTGAAGTGTTCCCAGGAGTGTGTAAAAAT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCAGCAGCAGGAAGCTTTaGAAACACCAACTCCAATTT +
Preference number: 4 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFSSRKL*KHQLQF
Trigger: AAATTGGAGTTGGTGTTTCCAAAGCTTCCTGCTGCT...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp TGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCATCATAGAAGAATCCCACTaGACATTCACATCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: CKTHIGFCLRLILDIGGIIEESH*TFTSEA
Trigger: AGCTTCCGATGTGAATGTCCAGTGGGATTCTTCTAT...GATGCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CATTCATTGTTATCAATGCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATCAGGGCACAAATTTCTaGCTCTTCGACACACTCATC +
Preference number: 4 (lower is better)
Translates to: HSLLSMQDVWCWVNPGGHQGTNF*LFDTLI
Trigger: GATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTG...ATGTCCTCCCGGATTTACCCAACACCATACGTCCTGCATTGATAACAATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGGCTTGGAGTGATTTCTaGATTTGGGTGATGAACACT +
Preference number: 4 (lower is better)
Translates to: CLRLILDIGGISFVCASPAWSDF*IWVMNT
Trigger: AGTGTTCATCACCCAAATCCAGAAATCACTCCAAGC...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTAGCAGCATTCCTGCTTaGAGTGATTTCTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPSSIPA*SDFWIW
Trigger: CCAAATCCAGAAATCACTCCAAGCAGGAATGCTGCT...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGTTAACACATAGGAACTaGCAGTTGTGTTGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLLTHRN*QLCCLV
Trigger: AACCAAGCAACACAACTGCCAGTTCCTATGTGTTAA...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATCATTCATTGATGTCTTaGCATCCTCCACTGAACTGT +
Preference number: 4 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHHSLMS*HPPLNC
Trigger: ACAGTTCAGTGGAGGATGCCAAGACATCAATGAATG...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACTTGCAAGACTCACATTaGCTTCTGTCTCAGACTGAT +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYLQDSH*LLSQTD
Trigger: ATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCAA...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp ATCAGGTCTCCGCTGATACCCGGGTCCACAGATGCACATATATGTGCCAATGAGCTGATCCCTTCCTTTTaGTTGATTTTAAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: IRSPLIPGSTDAHICANELIPSF*LILKKP
Trigger: TGGCTTCTTTAAAATCAACCAAAAGGAAGGGATCAG...CTCATTGGCACATATATGTGCATCTGTGGACCCGGGTATCAGCGGAGACCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CCA 90 bp CATTCATTGTTATCAATGCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATCGTTTGCTGGAAGGATaGCATGTCAGCATAAATGGC +
Preference number: 4 (lower is better)
Translates to: HSLLSMQDVWCWVNPGGHRLLEG*HVSING
Trigger: GCCATTTATGCTGACATGCCATCCTTCCAGCAAACG...ATGTCCTCCCGGATTTACCCAACACCATACGTCCTGCATTGATAACAATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CCA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCAATTGGATACAGTCTaGGATTATCCCTTTGTAATT +
Preference number: 4 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFQLDTV*DYPFVI
Trigger: AATTACAAAGGGATAATCCCAGACTGTATCCAATTG...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGTCTGTAACAGCGGCATaGGAAGCCAGTGAAATGGTC +
Preference number: 4 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKESVTAA*EASEMV
Trigger: GACCATTTCACTGGCTTCCCATGCCGCTGTTACAGA...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR CAA 72 bp TTTTTGCAGATAAAATTGCAGGGTTTGGGAGCCTGGTaGCACTCGTTCAGATCTACACAGGAAGTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: FLQIKLQGLGAW*HSFRSTQEVPV
Trigger: AACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAACCAGGCTCCCAAACCCTGCAATTTTATCTGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp CATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCTGGAGGACAGATATGGGGACAATACACTaGTTTCCGCCAGGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: HIHAIISPIHLHVVWRTDMGTIH*FPPGKV
Trigger: AACCTTACCTGGCGGAAATCAGTGTATTGTCCCCAT...ATCTGTCCTCCAGACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp CATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCTGGAGGACAGATCACACCTTCCTCCATTaGGACAGCCACTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: HIHAIISPIHLHVVWRTDHTFLH*DSHFHK
Trigger: TTTGTGAAAGTGGCTGTCTCAATGGAGGAAGGTGTG...ATCTGTCCTCCAGACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATTATCCAGCTCGGCACTaGCAGGTGTACGAACCCTGG +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYYPARH*QVYEPW
Trigger: CCAGGGTTCGTACACCTGTCAGTGCCGAGCTGGATA...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCTGTTGTGAGAAAGGATaGAACCATGATTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRCCEKG*NHDCSG
Trigger: GCCGCTGCAATCATGGTTTCATCCTTTCTCACAACA...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTACATATATGTGCCAATaGGGTTCTTGCATTCCATTT +
Preference number: 4 (lower is better)
Translates to: LDIGGISFVCASPFPAPFTYMCQ*GSCIPF
Trigger: AAATGGAATGCAAGAACCTCATTGGCACATATATGT...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTAGCATTCCGATTTGGTaGCGGGGTTCCTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFSIPIW*RGSCCW
Trigger: CCAGCAACAGGAACCCCGTCACCAAATCGGAATGCT...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATCTGCTCCATTGGTCATaGATCCTCGGCCATGGGGAC +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYLLHWS*ILGHGD
Trigger: GTCCCCATGGCCGAGGATTCATGACCAATGGAGCAG...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGGCTCCTCCGCAGATGTaGGCGCTGAGGCATTCGTTT +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQAPPQM*ALRHSF
Trigger: AAACGAATGCCTCAGCGCTCACATCTGCGGAGGAGC...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCAATGAGACAAATGTCTaGCCAGGCCTCACACCTCTC +
Preference number: 4 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFNETNV*PGLTPL
Trigger: GAGAGGTGTGAGGCCTGGTCAGACATTTGTCTCATT...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR TCA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCACAGCATCTACCAAGATaGCCCCAAGGAAAGTACTTT +
Preference number: 4 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPQHLPR*PQGKYF
Trigger: AAAGTACTTTCCTTGGGGTCATCTTGGTAGATGCTG...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR TCA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCACAAGAAAATGGTCTCTaGAAGGTGGCAGGGAAATAC +
Preference number: 4 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPQENGL*KVAGKY
Trigger: GTATTTCCCTGCCACCTTTCAGAGACCATTTTCTTG...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR TCA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCTTGAGGCCAAGAGTTTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFLRPRV*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAAACTCTTGGCCTCAA...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR TCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGAGATTAGTGAGGTGCTaGAAGTTGCTGCCACCAACT +
Preference number: 4 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKERLVRC*KLLPPT
Trigger: AGTTGGTGGCAGCAACTTTCAGCACCTCACTAATCT...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp CATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCTGGAGGACAGATAAATCCGTAAGTGCATaGACATCGATTTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: HIHAIISPIHLHVVWRTDKSVSA*TSIWGH
Trigger: GTGGCCCCAAATCGATGTGCATGCACTTACGGATTT...ATCTGTCCTCCAGACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGCACCATTCATTATGCTaGATTCATCAATGTCAACAC +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLHHSLC*IHQCQH
Trigger: GTGTTGACATTGATGAATGCAGCATAATGAATGGTG...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp CATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCTGGAGGACAGATATTCATTCACATCTGTaGAGTTCCCGCCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: HIHAIISPIHLHVVWRTDIHSHL*SSRRFC
Trigger: ACAGAAGCGGCGGGAACTGCACAGATGTGAATGAAT...ATCTGTCCTCCAGACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp CATTCATTGTTATCAATGCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTCCAACTGTGTCAATaGACTGCCCATGACTGCATA +
Preference number: 4 (lower is better)
Translates to: HSLLSMQDVWCWVNPGGHFQLCQ*TAHDCI
Trigger: TATGCAGTCATGGGCAGTGCATTGACACAGTTGGAA...ATGTCCTCCCGGATTTACCCAACACCATACGTCCTGCATTGATAACAATGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp TCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTATTCCCATTTCCACTTaGACATTCATCAACATCTAT +
Preference number: 4 (lower is better)
Translates to: SSILEASVSFVLLRFLPRIPIST*TFINIY
Trigger: ATAGATGTTGATGAATGTGCAAGTGGAAATGGGAAT...ACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp GGATGGACACTTTTCAGATGCTTATATATTACAGGCAACCGCTTTTGCTGTGATCCTCATAGCCTTCATTaGACTGGCACTGGAAAGACC +
Preference number: 4 (lower is better)
Translates to: GWTLFRCLYITGNRFCCDPHSLH*TGTGKT
Trigger: GGTCTTTCCAGTGCCAGTGCAATGAAGGCTATGAGG...ATCACAGCAAAAGCGGTTGCCTGTAATATATAAGCATCTGAAAAGTGTCCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR GCA 90 bp AAAGAATTTTGTACTCGGATGTGTTCACAGCAGGACACATCTCACAAGGAGTACATCCCTCCTCGCAGGTaGATTCAAAACCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: KEFCTRMCSQQDTSHKEYIPPRR*IQNLQS
Trigger: TGATTGGAGGTTTTGAATGCACCTGCGAGGAGGGAT...GTACTCCTTGTGAGATGTGTCCTGCTGTGAACACATCCGAGTACAAAATTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp CATTCATTGTTATCAATGCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATACTCATCCTCATCTTTaGACATCCTACGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: HSLLSMQDVWCWVNPGGHTHPHL*TSYGLL
Trigger: GAGAAGACCGTAGGATGTGCAAAGATGAGGATGAGT...ATGTCCTCCCGGATTTACCCAACACCATACGTCCTGCATTGATAACAATGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAACCCAGTTTTACAAATaGAATGATATGATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGTQFYK*NDMILC
Trigger: ACAGAGGATCATATCATTGCATTTGTAAAACTGGGT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTACCCAGTTTTACAAATaGAATGATATGATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGTQFYK*NDMILC
Trigger: ACAGAGGATCATATCATTGCATTTGTAAAACTGGGT...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp CAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAGCTCCTTCCATCCGTTGTGTTGCTTGGTTaGACACTCATCAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: QLCCLVAHSSRSLQLLPSVVLLG*TLIKIF
Trigger: AAAGATCTTGATGAGTGTGCAACCAAGCAACACAAC...GGATGGAAGGAGCTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR GCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACATTCATTGTTATCAATaGAGGACGTATGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYIHCYQ*RTYGVG
Trigger: CCCAACACCATACGTCCTGCATTGATAACAATGAAT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTTTGGCATATTGCACATaGTGTGATGAAGGATGCACT +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPLAYCT*CDEGCT
Trigger: AGTGCATCCTTCATCACAGCATGTGCAATATGCCAA...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp CAGATCTTCAGCCACAGAATTAAATCCCCACGTCCTTTATATACAGGAGCAATCGTTCTCAGAACCACTTaGCCTGTTCTGCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: QIFSHRIKSPRPLYTGAIVLRTT*PVLLPM
Trigger: CATTGGAAGCAGAACAGGGCAAGTGGTTCTGAGAAC...GATTGCTCCTGTATATAAAGGACGTGGGGATTTAATTCTGTGGCTGAAGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp CAGATCTTCAGCCACAGAATTAAATCCCCACGTCCTTTATATACAGGAGCAATCCAAGAAGGCAGTATTTaGTGGGGAGAAGGAACCAGT +
Preference number: 4 (lower is better)
Translates to: QIFSHRIKSPRPLYTGAIQEGSI*WGEGTS
Trigger: ACTGGTTCCTTCTCCCCAGCAAATACTGCCTTCTTG...GATTGCTCCTGTATATAAAGGACGTGGGGATTTAATTCTGTGGCTGAAGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGAAGACAAGCTGGGACTaGACATCCAGTGAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKEKTSWD*TSSEQK
Trigger: TTTCTGCTCACTGGATGTGCAGTCCCAGCTTGTCTT...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTCACCGCCTCTTCTCTTaGCCCGACTGGCTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCHRLFS*PDWLWF
Trigger: AAACCAGAGCCAGTCGGGCCAAGAGAAGAGGCGGTG...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTTGTGTAACAGTATCCTaGGCGAACATCTATGCATCT +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPCVTVS*ANIYAS
Trigger: AGATGCATAGATGTTCGCCCAGGATACTGTTACACA...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GAGGTCGAATATCCAAATAGCAATTTCCAGAGCGGGTATCAACACAGCCAACTCATAGAAGAATCCCACTaGACATTCACATCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: EVEYPNSNFQSGYQHSQLIEESH*TFTSEA
Trigger: AGCTTCCGATGTGAATGTCCAGTGGGATTCTTCTAT...GAGTTGGCTGTGTTGATACCCGCTCTGGAAATTGCTATTTGGATATTCGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp TGTAACATGTCCCTGGACCACAGATTCCAGGAGTCTCACATTCATTCACATCATGTTTTGACAGGTACCTaGTGCACATTTTCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: CNMSLDHRFQESHIHSHHVLTGT*CTFSGF
Trigger: GAACCCAGAAAATGTGCACCAGGTACCTGTCAAAAC...ATGATGTGAATGAATGTGAGACTCCTGGAATCTGTGGTCCAGGGACATGTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp AAAGAATTTTGTACTCGGATGTGTTCACAGCAGGACACATCTCACAAGGAGTACCAGGGCACAAATTTCTaGCTCTTCGACACACTCATC +
Preference number: 4 (lower is better)
Translates to: KEFCTRMCSQQDTSHKEYQGTNF*LFDTLI
Trigger: GATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTG...GTACTCCTTGTGAGATGTGTCCTGCTGTGAACACATCCGAGTACAAAATTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCACAAGGAAAACCCTTCTaGACACAGACATTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPQGKPF*TQTFEA
Trigger: AGCTTCAAATGTCTGTGTCCAGAAGGGTTTTCCTTG...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCTTCACATGTCATCATTaGACCGGGCTCAAATCCCTC +
Preference number: 4 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRFTCHH*TGLKSL
Trigger: GAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp CAGATCTTCAGCCACAGAATTAAATCCCCACGTCCTTTATATACAGGAGCAATCCTGGATCTTGAAACTTaGGAGACCCACACCAAAGGA +
Preference number: 4 (lower is better)
Translates to: QIFSHRIKSPRPLYTGAILDLET*ETHTKG
Trigger: TCCTTTGGTGTGGGTCTCCCAAGTTTCAAGATCCAG...GATTGCTCCTGTATATAAAGGACGTGGGGATTTAATTCTGTGGCTGAAGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp AATAAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCAGTTTGAGACCATCCTaGCCAACATGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: NKHLLSDQGQVYHDKQTSSLRPS*PTWRNP
Trigger: GGGGTTTCGCCATGTTGGCCAGGATGGTCTCAAACT...GGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR TCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATAGGAGCCATCAGTGTTaGCGCAACGCCCATTCATGC +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYRSHQC*RNAHSC
Trigger: GCATGAATGGGCGTTGCGTCAACACTGATGGCTCCT...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATTCTTCTTGGTCATGTTaGATAACAATTCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHSSWSC*ITILHH
Trigger: GTGATGGAGAATTGTTATTCAACATGACCAAGAAGA...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537463.6
ENST00000674301.1
CDS-3UTR TCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATACATATATGTGCCAATaGGGTTCTTGCATTCCATTT +
Preference number: 4 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHTYMCQ*GSCIPF
Trigger: AAATGGAATGCAAGAACCTCATTGGCACATATATGT...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR TCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAATTTGTAGCACCTCTGTaGAGCAGTACCCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKFVAPL*SSTLPD
Trigger: ATCGGGAAGGGTACTGCTTCACAGAGGTGCTACAAA...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCCCTCAGTCTACTTATTaGACTTGCCATGTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFPQSTY*TCHVPC
Trigger: GCAAGGCACATGGCAAGTTCAATAAGTAGACTGAGG...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTTTCCTGGCCCACTGCTaGAGAGTGCCTGATATTCCG +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCFLAHC*RVPDIP
Trigger: CGGAATATCAGGCACTCTGCAGCAGTGGGCCAGGAA...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTTGCACTTGCCGTGGGTaGAGAGGCTGGGTATCATCT +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCCTCRG*RGWVSS
Trigger: AGATGATACCCAGCCTCTGCACCCACGGCAAGTGCA...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACATTCGTCAATGTCTGTaGAGTTCCTTTCTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYIRQCL*SSFLQN
Trigger: ATTCTGAAGAAAGGAACTGCACAGACATTGACGAAT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAAATGGTAGCCAGGGTTaGAGGCACACTGATACTTCC +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKNGSQG*RHTDTS
Trigger: GGAAGTATCAGTGTGCCTGCAACCCTGGCTACCATT...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATTTTGCCACAGTTGTGTaGTCCAATTTCACATTCATT +
Preference number: 4 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHFATVV*SNFTFI
Trigger: AATGAATGTGAAATTGGAGCACACAACTGTGGCAAA...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp GCACTGTCCATGTTTACAGACATCGGGTTCTTTGCATTCGTCCATATCAACTGCACATTTGAAGCTTCCTaGTGTATTGGTACATACAGC +
Preference number: 4 (lower is better)
Translates to: ALSMFTDIGFFAFVHINCTFEAS*CIGTYS
Trigger: GCTGTATGTACCAATACAGCAGGAAGCTTCAAATGT...GCAGTTGATATGGACGAATGCAAAGAACCCGATGTCTGTAAACATGGACAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAACATCAGTTTCGTTTGTaGTTCTCCGTTTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKHQFRL*FSVSCP
Trigger: GGGGCAGGAAACGGAGAAGCACAAACGAAACTGATG...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTTGCTGTGATGAAGGATaGACTGGTGATCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGICCDEG*TGDPLA
Trigger: GGCCAGAGGATCACCAGTGCATCCTTCATCACAGCA...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGAGGGCAATAAACATCTaGTGTCTGATCAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKERAINI*CLIKVR
Trigger: CCTGACCTTGATCAGACAGCAGATGTTTATTGCCCT...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTGCATGCACATCGATTTaGGGCCACACACCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCACTSI*GHTPSS
Trigger: GGAGGAAGGTGTGTGGCCCCAAATCGATGTGCATGC...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCTGGAGGACAGATTGTCCCTGGCACATCTaGTTGCTGATCACAGTAAAA +
Preference number: 4 (lower is better)
Translates to: HIHAIISPIHLHVVWRTDCPWHI*LLITVK
Trigger: TTTTACTGTGATCAGCAACCAGATGTGCCAGGGACA...ATCTGTCCTCCAGACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATCCGCTGAGTTGTCCCTaGCACATCTGGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYPLSCP*HIWLLI
Trigger: GATCAGCAACCAGATGTGCCAGGGACAACTCAGCGG...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGTCCCGTGCGGATATTTaGAATGAAGCCACGGCGGCA +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQSRADI*NEATAA
Trigger: TGCCGCCGTGGCTTCATTCCAAATATCCGCACGGGA...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAATTTGGTTATGGACTGTaGCAGCTGGTTAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKFGYGL*QLVRAA
Trigger: CGCTGCTCTAACCAGCTGCCACAGTCCATAACCAAA...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATTGTGCAGGACACGGCTaGCAAGGTTCCCCAAATGCA +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYCAGHG*QGSPNA
Trigger: TGCATTTGGGGAACCTTGCCAGCCGTGTCCTGCACA...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TGTAGGACCCATCCAAGTTTTGACAGGTACCTGGTGCACATTTTCTGGGTTCTACTGGTGCACATTTTCTaGGTTCTAGAAGACATTCAT +
Preference number: 4 (lower is better)
Translates to: CRTHPSFDRYLVHIFWVLLVHIF*VLEDIH
Trigger: ATGAATGTCTTCTAGAACCCAGAAAATGTGCACCAG...TAGAACCCAGAAAATGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGTGCACATTTTCTaGGTTCTAGAAGACATTCAT +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPLVHIF*VLEDIH
Trigger: ATGAATGTCTTCTAGAACCCAGAAAATGTGCACCAG...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp AAAGAATTTTGTACTCGGATGTGTTCACAGCAGGACACATCTCACAAGGAGTACAGCAGCATTCCTGCTTaGAGTGATTTCTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: KEFCTRMCSQQDTSHKEYSSIPA*SDFWIW
Trigger: CCAAATCCAGAAATCACTCCAAGCAGGAATGCTGCT...GTACTCCTTGTGAGATGTGTCCTGCTGTGAACACATCCGAGTACAAAATTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTAGTCCCAGTTATATCTaGAGTGTACCCAGTTTTACA +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPSPSYI*SVPSFT
Trigger: TGTAAAACTGGGTACACTCCAGATATAACTGGGACT...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAAGTGAGAATCCCCGCTaGCATTCACAGGTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKSENPR*HSQVKL
Trigger: AAGCTTCACCTGTGAATGCCAGCGGGGATTCTCACT...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGAAAAGTTACAGCAATTaGATACAGTCTGGGATTATC +
Preference number: 4 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLKSYSN*IQSGII
Trigger: GATAATCCCAGACTGTATCCAATTGCTGTAACTTTT...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGAGCCACATATCCAAGTaGATACCATCACTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKESHISK*IPSLGD
Trigger: GTCACCAAGTGATGGTATCCACTTGGATATGTGGCT...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp GCGCCCATTCTCACAGATCCCTGGCTTCGTCTGACATTCATTCTCATCTACACAGCACATTCATTTATATaGATGGACACTTTTCAGATG +
Preference number: 4 (lower is better)
Translates to: APILTDPWLRLTFILIYTAHSFI*MDTFQM
Trigger: CATCTGAAAAGTGTCCATCCATATAAATGAATGTGC...TGTGTAGATGAGAATGAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
3UTR CAA 72 bp TTGATGCACTGTCCATGTTTACAGACATCGGGTTCTTaGCATTCGTCCATATCAACTGCTGAATCATCAGGT +
Preference number: 4 (lower is better)
Translates to: LMHCPCLQTSGS*HSSISTAESSG
Trigger: ACCTGATGATTCAGCAGTTGATATGGACGAATGCAAAGAACCCGATGTCTGTAAACATGGACAGTGCATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGTATATCACTGCCTGCTaGCGTCATTCCTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQYITAC*RHSWPT
Trigger: AGTGGGCCAGGAATGACGTCAGCAGGCAGTGATATA...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATGGGTTGCAGGCACACTaGTACTTCCCTATGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYGLQAH*YFPMRF
Trigger: GAACCTCATAGGGAAGTATCAGTGTGCCTGCAACCC...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCAATTTCACATTCATTaGTGTCTGTACAGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPQFHIH*CLYSQF
Trigger: AAACTGGCTGTACAGACATCAATGAATGTGAAATTG...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTCATCAGGTCCCACGATaGTCCCACTTCCATAAGGAC +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCHQVPR*SHFHKD
Trigger: GTCCTTATGGAAGTGGGATCATCGTGGGACCTGATG...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp AGAAAGGATGAAACCATGATTGCAGCGGCAGTTGAAGGAACCAATTGTGTTCCGACATTTGCATTCATATaGCCCATAAGTGTTCACACA +
Preference number: 4 (lower is better)
Translates to: RKDETMIAAAVEGTNCVPTFAFI*PISVHT
Trigger: TGTGTGAACACTTATGGGTCATATGAATGCAAATGT...CGGAACACAATTGGTTCCTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTACATATATGTGCCAATaGGGTTCTTGCATTCCATTT +
Preference number: 4 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPTYMCQ*GSCIPF
Trigger: AAATGGAATGCAAGAACCTCATTGGCACATATATGT...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTTTGCTGGAGCCGATCTaGCACATGTTTTGTAGCACC +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGILLEPI*HMFCST
Trigger: GGTGCTACAAAACATGTGTCAGATCGGCTCCAGCAA...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATGTAGCCTTTCGGGCATaGACACTGGTAACTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYVAFRA*TLVTPF
Trigger: GAAGGGAGTTACCAGTGTTCATGCCCGAAAGGCTAC...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCGATAAAAGGGGTCACTaGCAGTCCATCCTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFDKRGH*QSILLF
Trigger: AAACAACAGGATGGACTGTCAGTGACCCCTTTTATC...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAACAAATGCATACTCAGTaGTGGCGCAACAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKQMHTQ*WRNSIQ
Trigger: CTGAATGCTGTTGCGCCAGCACTGAGTATGCATTTG...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTTCACACACTGGCCTCTaGCACAGAGGTCAGGAGATA +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCSHTGL*HRGQEI
Trigger: TATCTCCTGACCTCTGTGGCAGAGGCCAGTGTGTGA...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACACCCAGTTTTACAAATaGAATGATATGATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYTQFYK*NDMILC
Trigger: ACAGAGGATCATATCATTGCATTTGTAAAACTGGGT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGCGTGGGTGCAGAGGCTaGGTATCATCTTGCACTCAT +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQRGCRG*VSSCTH
Trigger: ATGAGTGCAAGATGATACCCAGCCTCTGCACCCACG...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GTCAGCATAGTAGTTTCTGTAGCACAAACTTCTTCTCATATCCATGCAATTATTGTTGGACAGCGGCACTaGAAACTCCCAAAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: VSIVVSVAQTSSHIHAIIVGQRH*KLPKVL
Trigger: CAACACCTTTGGGAGTTTCCAGTGCCGCTGTCCAAC...AATAATTGCATGGATATGAGAAGAAGTTTGTGCTACAGAAACTACTATGCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTGTCGATGACAAAGCCTaGCCTTTGACTTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGIVDDKA*PLTSTE
Trigger: CTCTGTGGAAGTCAAAGGCCAGGCTTTGTCATCGAC...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CGTTCTGACACTCGTCAATATCTTCACAAACCAACAACTTGTCATTATAGAAGAGTCGATGACAAAGCCTaGCCTTTGACTTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: RSDTRQYLHKPTTCHYRRVDDKA*PLTSTE
Trigger: CTCTGTGGAAGTCAAAGGCCAGGCTTTGTCATCGAC...TCTTCTATAATGACAAGTTGTTGGTTTGTGAAGATATTGACGAGTGTCAGAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCTTATGTCCAAGCACATaGTTTGGTCATCATTTGTTT +
Preference number: 4 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFLCPST*FGHHLF
Trigger: AAACAAATGATGACCAAACCATGTGCTTGGACATAA...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTTTCCCGTACGTTTGCTaGAAGGATGGCATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFFPYVC*KDGMSA
Trigger: TGCTGACATGCCATCCTTCCAGCAAACGTACGGGAA...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp AATAAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTCCTGCCCGTTGTTCTaGATCTTGAAACTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: NKHLLSDQGQVYHDKQTSSCPLF*ILKLGR
Trigger: TCTCCCAAGTTTCAAGATCCAGAACAACGGGCAGGA...GGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGCCACGAAGGCCAAGATaGAACCGAATTAATCATAAC +
Preference number: 4 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKEPRRPR*NRINHN
Trigger: GTTATGATTAATTCGGTTCCATCTTGGCCTTCGTGG...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp CACTTCATAAACTGTGCATCTCCAATCAGAATGGTAAACAGGTTTCACTGTAGTTATACAACAAGAAAATaGGGTAGGGCGCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: HFINCASPIRMVNRFHCSYTTRK*GRAQWL
Trigger: GAGCCACTGCGCCCTACCCCATTTTCTTGTTGTATA...ACTACAGTGAAACCTGTTTACCATTCTGATTGGAGATGCACAGTTTATGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR CAA 72 bp GTTGTAAGAGCTGGAAGGAGTTCTAGGATTCGAACCTaGTTACTGACGTGGGAAATATTGAAAGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: VVRAGRSSRIRT*LLTWEILKAKM
Trigger: CATCTTTGCTTTCAATATTTCCCACGTCAGTAACAAGGTTCGAATCCTAGAACTCCTTCCAGCTCTTACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR TCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATTTCTGGCATAGACAGTaGTCGTCACTGCAGCTACCT +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYFWHRQ*SSLQLP
Trigger: AGGTAGCTGCAGTGACGATCACTGTCTATGCCAGAA...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTCGGTATAAATGTCGATaGCAAAGCCTGGCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGIRYKCR*QSLAFD
Trigger: GTCAAAGGCCAGGCTTTGTCATCGACATTTATACCG...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTGACCCATCCAAGTTTTaGCAGGTACCTGGTGCACAT +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCDPSKF*QVPGAH
Trigger: ATGTGCACCAGGTACCTGTCAAAACTTGGATGGGTC...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAGTTTGGGGTAGCCATTaGTCTTACACTCGTAACAAG +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKVWGSH*SYTRNK
Trigger: CTTGTTACGAGTGTAAGATCAATGGCTACCCCAAAC...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTGTAAAAGAGAAAGGATaGCGTCAAGGCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGIVKEKG*RQGTRP
Trigger: AGGACGAGTGCCTTGACGTCATCCTTTCTCTTTTAC...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR TCA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCAAAATACTGGACTAAATaGGGTCCTCTTGAGAACATA +
Preference number: 4 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPKYWTK*GPLENI
Trigger: TATGTTCTCAAGAGGACCTCATTTAGTCCAGTATTT...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp GTCAGCATAGTAGTTTCTGTAGCACAAACTTCTTCTCATATCCATGCAATTATTAGTCTGCATGCTGGCTaGACATATGGGTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: VSIVVSVAQTSSHIHAIISLHAG*TYGFHW
Trigger: CCAATGGAACCCATATGTGCAGCCAGCATGCAGACT...AATAATTGCATGGATATGAGAAGAAGTTTGTGCTACAGAAACTACTATGCTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTCTGTGTATCCTTCCTTaGACAGACAGCGGTAAGATC +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGILCILP*TDSGKI
Trigger: GATCTTACCGCTGTCTGTGCAAGGAAGGATACACAG...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp GAGGTCGAATATCCAAATAGCAATTTCCAGAGCGGGTATCAACACAGCCAACTCTTCTTCTCATATCCATaGAATTATTTCCCCCATTCA +
Preference number: 4 (lower is better)
Translates to: EVEYPNSNFQSGYQHSQLFFSYP*NYFPHS
Trigger: TGAATGGGGGAAATAATTGCATGGATATGAGAAGAA...GAGTTGGCTGTGTTGATACCCGCTCTGGAAATTGCTATTTGGATATTCGACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTCAGTGTTACTGCATGTaGCCAGGGCACAAATTTCTG +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFQCYCM*PGHKFL
Trigger: CAGAAATTTGTGCCCTGGGCACATGCAGTAACACTG...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp AATAAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCCCACTTGCCCTGTTCTaGTTCCAATGTAGACATCTA +
Preference number: 4 (lower is better)
Translates to: NKHLLSDQGQVYHDKQTSPLALF*FQCRHL
Trigger: TAGATGTCTACATTGGAAGCAGAACAGGGCAAGTGG...GGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp AATAAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCATTGAACTTGCCATGTaGCTTGCACACAGGGCAATA +
Preference number: 4 (lower is better)
Translates to: NKHLLSDQGQVYHDKQTSIELAM*LAHRAI
Trigger: TATTGCCCTGTGTGCAAGGCACATGGCAAGTTCAAT...GGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp CAAACTTCTTCTCATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCAGCTATCTGACCAGATaGGCAAGTGCACATATTTGG +
Preference number: 4 (lower is better)
Translates to: QTSSHIHAIISPIHLHVVSYLTR*ASAHIW
Trigger: CCAAATATGTGCACTTGCCCATCTGGTCAGATAGCT...GACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATGAGAAGAAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGCAGATATTCCACTGGTaGTCGAGGGACCGGAATTTG +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQQIFHW*SRDRNL
Trigger: CAAATTCCGGTCCCTCGACCACCAGTGGAATATCTG...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTGTAACTCCCAGGAGTTaGAATGCAGCGTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFVTPRS*NAASIL
Trigger: CAAAATGGACGCTGCATTCCAACTCCTGGGAGTTAC...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAAGCGGTAAGATCCCATaGTATTCTTGCAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKSGKIP*YSCSLH
Trigger: ATGCAGACTGCAAGAATACCATGGGATCTTACCGCT...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CAAACTTCTTCTCATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCAGCGGTAAGATCCCATaGTATTCTTGCAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: QTSSHIHAIISPIHLHVVSGKIP*YSCSLH
Trigger: ATGCAGACTGCAAGAATACCATGGGATCTTACCGCT...GACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATGAGAAGAAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp CAAACTTCTTCTCATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCACAGCCAACTCGAGTTaGGTTCAGTTCAAAATCAGG +
Preference number: 4 (lower is better)
Translates to: QTSSHIHAIISPIHLHVVTANSS*VQFKIR
Trigger: CCTGATTTTGAACTGAACCCAACTCGAGTTGGCTGT...GACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATGAGAAGAAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTGTTGTAACATGTCCCTaGACCACAGATTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGIVVTCP*TTDSRS
Trigger: ACTCCTGGAATCTGTGGTCCAGGGACATGTTACAAC...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTTTCACATGTCATCATTaGACCGGGCTCAAATCCCTC +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFFTCHH*TGLKSL
Trigger: GAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTTTCACATGTCATCATTaGACCGGGCTCAAATCCCTC +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGIFTCHH*TGLKSL
Trigger: GAGGGATTTGAGCCCGGTCCAATGATGACATGTGAA...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp CACTTCATAAACTGTGCATCTCCAATCAGAATGGTAAACAGGTTTCACTGTAGTGGGAAGCCAGTGAAATaGTCAGTTGCATGTACACAA +
Preference number: 4 (lower is better)
Translates to: HFINCASPIRMVNRFHCSGKPVK*SVACTQ
Trigger: TTGTGTACATGCAACTGACCATTTCACTGGCTTCCC...ACTACAGTGAAACCTGTTTACCATTCTGATTGGAGATGCACAGTTTATGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCACTAGGAGTCAAAAACTaGTCTGGTGAGTTTACTTTT +
Preference number: 4 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPLGVKN*SGEFTF
Trigger: AAAAGTAAACTCACCAGACCAGTTTTTGACTCCTAG...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR TCA 90 bp GTCAGCATAGTAGTTTCTGTAGCACAAACTTCTTCTCATATCCATGCAATTATTACAGGTTGTCCACAGTaGGTCCCTATGTATCCTTTC +
Preference number: 4 (lower is better)
Translates to: VSIVVSVAQTSSHIHAIITGCPQ*VPMYPF
Trigger: GAAAGGATACATAGGGACTCACTGTGGACAACCTGT...AATAATTGCATGGATATGAGAAGAAGTTTGTGCTACAGAAACTACTATGCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATAACTGCCATCTGTGTTaGTGCAGCGTCCATTATTGC +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYNCHLC*CSVHYC
Trigger: GCAATAATGGACGCTGCATCAACACAGATGGCAGTT...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGGACTGCAGCTACATTTaGAGCTTCCTGCTGTATTGG +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQDCSYI*SFLLYW
Trigger: CCAATACAGCAGGAAGCTTCAAATGTAGCTGCAGTC...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGGAAAGGATGAAACCATaGTTGCAGCGGCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQERMKP*LQRQLK
Trigger: CTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTC...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp GTCAGCATAGTAGTTTCTGTAGCACAAACTTCTTCTCATATCCATGCAATTATTCTGGACACAGACATTTaGAGCTGCCTTCAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: VSIVVSVAQTSSHIHAIILDTDI*SCLQCY
Trigger: GTAACACTGAAGGCAGCTTCAAATGTCTGTGTCCAG...AATAATTGCATGGATATGAGAAGAAGTTTGTGCTACAGAAACTACTATGCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATGACAGTGATCGTCACTaGAGCTACCTCCATTCATAC +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYDSDRH*SYLHSY
Trigger: GTATGAATGGAGGTAGCTGCAGTGACGATCACTGTC...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGTCCCAGGAGTTGGAATaGAGCGTCCATTTTGACAGA +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQSQELE*SVHFDR
Trigger: TCTGTCAAAATGGACGCTGCATTCCAACTCCTGGGA...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTATCCACCATAGCATGTaGTCCGCATGTGTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCIHHSM*SACVCQ
Trigger: TTGACACACACATGCGGAGCACATGCTATGGTGGAT...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGTTCTTGCAGTCTGCATaGTGGCTGCACATATGGGTT +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQFLQSA*WLHIWV
Trigger: AACCCATATGTGCAGCCAGCATGCAGACTGCAAGAA...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTTTCCAACTGTGTCAATaGACTGCCCATGACTGCATA +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFFQLCQ*TAHDCI
Trigger: TATGCAGTCATGGGCAGTGCATTGACACAGTTGGAA...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTAGCTATCTGACCAGATaGGCAAGTGCACATATTTGG +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFSYLTR*ASAHIW
Trigger: CCAAATATGTGCACTTGCCCATCTGGTCAGATAGCT...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGGCATCTGGTACCATCTaGAGAGGTGTAAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQASGTI*RGVKTR
Trigger: CCTGGTTTTTACACCTCTCCAGATGGTACCAGATGC...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGAGCAGCACTGCATTTTaGTTATGGACTGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQSSTAF*LWTVAA
Trigger: AGCTGCCACAGTCCATAACCAAAATGCAGTGCTGCT...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CATTCATTGTTATCAATGCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTATGTCCAAGCACATaGTTTGGTCATCATTTGTTT +
Preference number: 4 (lower is better)
Translates to: HSLLSMQDVWCWVNPGGHLCPST*FGHHLF
Trigger: AAACAAATGATGACCAAACCATGTGCTTGGACATAA...ATGTCCTCCCGGATTTACCCAACACCATACGTCCTGCATTGATAACAATGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAACAAGGAAAACCCTTCTaGACACAGACATTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKQGKPF*TQTFEA
Trigger: AGCTTCAAATGTCTGTGTCCAGAAGGGTTTTCCTTG...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GTCAGCATAGTAGTTTCTGTAGCACAAACTTCTTCTCATATCCATGCAATTATTCTCATTCGCAAATCTTaGCACCTTCTTCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: VSIVVSVAQTSSHIHAIILIRKS*HLLPLE
Trigger: CTCCAGTGGAAGAAGGTGCCAAGATTTGCGAATGAG...AATAATTGCATGGATATGAGAAGAAGTTTGTGCTACAGAAACTACTATGCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTATGAATCCTCGGCCATaGGGACAGAGTTTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGIMNPRP*GQSFLK
Trigger: TTTCAAGAAACTCTGTCCCCATGGCCGAGGATTCAT...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTGGCAGTTGTGTTGCTTaGTTGCACACTCATCAAGAT +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGIGSCVA*LHTHQD
Trigger: ATCTTGATGAGTGTGCAACCAAGCAACACAACTGCC...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp GGATGGACACTTTTCAGATGCTTATATATTACAGGCAACCGCTTTTGCTGTGATTTAACACATAGGAACTaGCAGTTGTGTTGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GWTLFRCLYITGNRFCCDLTHRN*QLCCLV
Trigger: AACCAAGCAACACAACTGCCAGTTCCTATGTGTTAA...ATCACAGCAAAAGCGGTTGCCTGTAATATATAAGCATCTGAAAAGTGTCCATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTATGGCCAACCCCCAATaGAAATACACGTCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCMANPQ*KYTSQF
Trigger: AAACTGGGACGTGTATTTCCATTGGGGGTTGGCCAT...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTCGTTTGCTGGAAGGATaGCATGTCAGCATAAATGGC +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCRLLEG*HVSING
Trigger: GCCATTTATGCTGACATGCCATCCTTCCAGCAAACG...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp CACTTCATAAACTGTGCATCTCCAATCAGAATGGTAAACAGGTTTCACTGTAGTCCTAAATTTCCACTGTaGAACAACTTTTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HFINCASPIRMVNRFHCSPKFPL*NNFCCP
Trigger: TGGGCAGCAAAAGTTGTTCCACAGTGGAAATTTAGG...ACTACAGTGAAACCTGTTTACCATTCTGATTGGAGATGCACAGTTTATGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR CAA 72 bp GCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTaGGTGTATACATTTAACAAGTCTTTGGTCTTAATA +
Preference number: 4 (lower is better)
Translates to: ARVGQSPKFHYH*VYTFNKSLVLI
Trigger: TATTAAGACCAAAGACTTGTTAAATGTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR TCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGGTAAGCATTATAACGTaGTCCACAGACATTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQVSIIT*STDIGS
Trigger: GGACCCAATGTCTGTGGATCACGTTATAATGCTTAC...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGAGGAGAGGATCTCTCTaGCACTCATCAATATCCATG +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQRRGSL*HSSISM
Trigger: CATGGATATTGATGAGTGTCAGAGAGATCCTCTCCT...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTACAGTGGCAGATAAATaGGCCTTTCGTGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFTVADK*AFRVFT
Trigger: TGTGAAAACACGAAAGGCTCATTTATCTGCCACTGT...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGTCACACTTCTCATTTTaGAGACTGTATCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQSHFSF*RLYPGG
Trigger: CCCACCTGGATACAGTCTTCAAAATGAGAAGTGTGA...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATCATTCCTGCTTGGAGTaGTTTCTGGATTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYHSCLE*FLDLGD
Trigger: ATCACCCAAATCCAGAAATCACTCCAAGCAGGAATG...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTCTCTTCAAAGATTTTTaGGAGCACTTTCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGILFKDF*EHFPVS
Trigger: GGACACAGGAAAGTGCTCTCAAAAATCTTTGAAGAG...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp CACTTCATAAACTGTGCATCTCCAATCAGAATGGTAAACAGGTTTCACTGTAGTAGAAACAACCAGAATTaGTATTGCAGGGAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: HFINCASPIRMVNRFHCSRNNQN*YCRERN
Trigger: GTTCCTTTCCCTGCAATATCAATTCTGGTTGTTTCT...ACTACAGTGAAACCTGTTTACCATTCTGATTGGAGATGCACAGTTTATGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTCTCCAATTTCATTGCTaGAGGCTGTATCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFLQFHC*RLYLHC
Trigger: ACAATGGAGATACAGCCTGCAGCAATGAAATTGGAG...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCATTCCCATTTCCACTTaGACATTCATCAACATCTAT +
Preference number: 4 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRIPIST*TFINIY
Trigger: ATAGATGTTGATGAATGTGCAAGTGGAAATGGGAAT...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTAGACATCGGGTTCTTTaGATTCGTCCATATCAACTG +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGIRHRVL*IRPYQL
Trigger: CAGTTGATATGGACGAATGCAAAGAACCCGATGTCT...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGTTCACTACCACGAAATaGTTTCCTGCCCTTAGGGAT +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQFTTTK*FPALRD
Trigger: ATCCCTAAGGGCAGGAAAGCATTTCGTGGTAGTGAA...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTCGCCCACCACCTTCATaGCATCTTATTTCCTCTTAT +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCRPPPS*HLISSY
Trigger: ATAAGAGGAAATAAGATGGCATGAAGGTGGTGGGCG...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTAGTGAAATGGTCAGTTaGATGTACACAACACAAACA +
Preference number: 4 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRISEMVS*MYTTQT
Trigger: TGTTTGTGTTGTGTACATGCAACTGACCATTTCACT...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp AATAAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTATCACAGCCTAAGTaGTTGGCTCATACAATCATC +
Preference number: 4 (lower is better)
Translates to: NKHLLSDQGQVYHDKQTSLSQPK*LAHTII
Trigger: GATGATTGTATGAGCCAAGCACTTAGGCTGTGATAA...GGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR GCA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTTCACTTCATAAACTGTaGATCTCCAATCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRISLHKL*ISNQNG
Trigger: ACCATTCTGATTGGAGATGCACAGTTTATGAAGTGA...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp GTCAGCATAGTAGTTTCTGTAGCACAAACTTCTTCTCATATCCATGCAATTATTTATTGCAGTGTTGTATaGATCTGGAGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: VSIVVSVAQTSSHIHAIIYCSVV*IWSHRK
Trigger: CTTCCTGTGGCTCCAGATCCATACAACACTGCAATA...AATAATTGCATGGATATGAGAAGAAGTTTGTGCTACAGAAACTACTATGCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTAGCAGCAGGAAGCTTTaGAAACACCAACTCCAATTT +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGISSRKL*KHQLQF
Trigger: AAATTGGAGTTGGTGTTTCCAAAGCTTCCTGCTGCT...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTGTTTTGACAGGTACCTaGTGCACATTTTCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCVLTGT*CTFSGF
Trigger: GAACCCAGAAAATGTGCACCAGGTACCTGTCAAAAC...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTATTCTCACAGATCCCTaGCTTCGTCTGACATTCATT +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFILTDP*LRLTFI
Trigger: AATGAATGTCAGACGAAGCCAGGGATCTGTGAGAAT...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTCATTCATTGATGTCTTaGCATCCTCCACTGAACTGT +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGIHSLMS*HPPLNC
Trigger: ACAGTTCAGTGGAGGATGCCAAGACATCAATGAATG...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR CAA 72 bp TTGTTTTATTGTGACATTTATGACATTGACCCCTTGTaGACAGGAATGACCGAGGGTAATCTTGGCATATTG +
Preference number: 4 (lower is better)
Translates to: LFYCDIYDIDPL*TGMTEGNLGIL
Trigger: CAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTCAATGTCATAAATGTCACAATAAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
3UTR CAA 72 bp ACTATTTTCTGTGCTATTTTATCACAGCCTAAGTGCTaGGCTCATACAATCATCTTGTCCTTACTCCAGACT +
Preference number: 4 (lower is better)
Translates to: TIFCAILSQPKC*AHTIILSLLQT
Trigger: AGTCTGGAGTAAGGACAAGATGATTGTATGAGCCAAGCACTTAGGCTGTGATAAAATAGCACAGAAAATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
3UTR CAA 72 bp GCACATATATGTGCCAATGAGGTTCTTGCATTCCATTaGTTTTTCAGTACAGTCATGTTTTCCCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: AHICANEVLAFH*FFSTVMFSLFT
Trigger: TGTGAAGAGGGAAAACATGACTGTACTGAAAAACAAATGGAATGCAAGAACCTCATTGGCACATATATGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR TCA 90 bp GTCAGCATAGTAGTTTCTGTAGCACAAACTTCTTCTCATATCCATGCAATTATTAGGAACCATCTGTATTaGTGCACTGTCCATGTTTAC +
Preference number: 4 (lower is better)
Translates to: VSIVVSVAQTSSHIHAIIRNHLY*CTVHVY
Trigger: GTAAACATGGACAGTGCATCAATACAGATGGTTCCT...AATAATTGCATGGATATGAGAAGAAGTTTGTGCTACAGAAACTACTATGCTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAACATTTGCATTCATATaGCCCATAAGTGTTCACACA +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKTFAFI*PISVHT
Trigger: TGTGTGAACACTTATGGGTCATATGAATGCAAATGT...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATAGAAAGTGGTTGTTTTaGACTAGGGTAGTCACCTGT +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYRKWLF*TRVVTC
Trigger: ACAGGTGACTACCCTAGTTCAAAACAACCACTTTCT...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAACATGTTCCTTATGCTaGATTCATCCATATCTTCAC +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKTCSLC*IHPYLH
Trigger: GTGAAGATATGGATGAATGCAGCATAAGGAACATGT...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTATTCATTTATATCACTaGCTGCTGACGTCATTCCTG +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFIHLYH*LLTSFL
Trigger: CAGGAATGACGTCAGCAGGCAGTGATATAAATGAAT...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp GTCAGCATAGTAGTTTCTGTAGCACAAACTTCTTCTCATATCCATGCAATTATTTGCACTGCCCATGACTaGATATATTGGGGATTTCTT +
Preference number: 4 (lower is better)
Translates to: VSIVVSVAQTSSHIHAIICTAHD*IYWGFL
Trigger: AAGAAATCCCCAATATATGCAGTCATGGGCAGTGCA...AATAATTGCATGGATATGAGAAGAAGTTTGTGCTACAGAAACTACTATGCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR GCA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGATCCCACGGGACATTTaGATTCATATGACCCATAAG +
Preference number: 4 (lower is better)
Translates to: ESEIERSQTIERYRFKSQIPRDI*IHMTHK
Trigger: CTTATGGGTCATATGAATGCAAATGTCCCGTGGGAT...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp AATAAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCGATTTTGTAGTCACCTaGCACATCAGAGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: NKHLLSDQGQVYHDKQTSDFVVT*HIREKQ
Trigger: TTGTTTTTCTCTGATGTGGCAGGTGACTACAAAATC...GGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTCACAGATTCCAGGAATaGTGCTGCATTCATCAATAT +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGIHRFQE*CCIHQY
Trigger: ATATTGATGAATGCAGCACCATTCCTGGAATCTGTG...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATAAACTCATCTGTACTTaGGATGGGACACTGTTCACA +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYKLICT*DGTLFT
Trigger: TGTGAACAGTGTCCCATCCCAAGTACAGATGAGTTT...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp GTCAGCATAGTAGTTTCTGTAGCACAAACTTCTTCTCATATCCATGCAATTATTCAAGGAAAACCCTTCTaGACACAGACATTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VSIVVSVAQTSSHIHAIIQGKPF*TQTFEA
Trigger: AGCTTCAAATGTCTGTGTCCAGAAGGGTTTTCCTTG...AATAATTGCATGGATATGAGAAGAAGTTTGTGCTACAGAAACTACTATGCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTACAAATGCAATGATATaGTCCTCTGTCATTGACACA +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGITNAMI*SSVIDT
Trigger: TGTGTCAATGACAGAGGATCATATCATTGCATTTGT...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR GCA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAATTCTTCTCATATCCATaGAATTATTTCCCCCATTCA +
Preference number: 4 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKFFSYP*NYFPHS
Trigger: TGAATGGGGGAAATAATTGCATGGATATGAGAAGAA...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTATTCATTGTTATCAATaGAGGACGTATGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCIHCYQ*RTYGVG
Trigger: CCCAACACCATACGTCCTGCATTGATAACAATGAAT...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTTGGTTTCTATGCAGATaGTTTTTGTTGGATCCAAAG +
Preference number: 4 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFWFLCR*FLLDPK
Trigger: CTTTGGATCCAACAAAAACCATCTGCATAGAAACCA...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTAGTCCCAGTTATATCTaGAGTGTACCCAGTTTTACA +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCSPSYI*SVPSFT
Trigger: TGTAAAACTGGGTACACTCCAGATATAACTGGGACT...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATCTCTGCTACTTTCAATaGATAAAACAAGGGATCGAC +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYLCYFQ*IKQGID
Trigger: GTCGATCCCTTGTTTTATCCATTGAAAGTAGCAGAG...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp GTCAGCATAGTAGTTTCTGTAGCACAAACTTCTTCTCATATCCATGCAATTATTTCTTCTTGGTCATGTTaGATAACAATTCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: VSIVVSVAQTSSHIHAIISSWSC*ITILHH
Trigger: GTGATGGAGAATTGTTATTCAACATGACCAAGAAGA...AATAATTGCATGGATATGAGAAGAAGTTTGTGCTACAGAAACTACTATGCTGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR TCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTAAGAATCAACACATATaGCAAGGTAGCTTAGCTACA +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCKNQHI*QGSLAT
Trigger: TGTAGCTAAGCTACCTTGTCATATGTGTTGATTCTT...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR TCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATCCCTTTGTAATTAGATaGGCATTGACTAACGAAAGA +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYPFVIR*ALTNER
Trigger: TCTTTCGTTAGTCAATGCTCATCTAATTACAAAGGG...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CCA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTTTATGTCCAAGCACATaGTTTGGTCATCATTTGTTT +
Preference number: 4 (lower is better)
Translates to: NKSLVLISTITNPHIKGILCPST*FGHHLF
Trigger: AAACAAATGATGACCAAACCATGTGCTTGGACATAA...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CCA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATCTGATCCCTTCCTTTTaGTTGATTTTAAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYLIPSF*LILKKP
Trigger: TGGCTTCTTTAAAATCAACCAAAAGGAAGGGATCAG...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR GCA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTAATGACACCAGACTCTaGTACTTTCAATGGATAAAA +
Preference number: 4 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCNDTRL*YFQWIK
Trigger: TTTTATCCATTGAAAGTAGCAGAGTCTGGTGTCATT...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS GCA 90 bp CCCTCGACGCATGATGCCGAGCCGCCACCGGCTCCCGCCGCCTCTTaGCGCGCCCGGGGCTCGGTCTGCGGCCGCCGCTGCGCCCTGAAG +
Preference number: 5 (lower is better)
Translates to: PSTHDAEPPPAPAAS*RARGSVCGRRCALK
Trigger: CTTCAGGGCGCAGCGGCGGCCGCAGACCGAGCCCCGGGCGCGGCAAGAGGCGGCGGGAGCCGGTGGCGGCTCGGCATCATGCGTCGAGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316623.10
ENST00000537463.6
ENST00000560355.1
CDS CCA 90 bp GCGCGTCGTGTCCTCCACCGCCTCTTCTCTTGGCCCGACTGGCTCTaGTTTCCTTCACGTTCCCAGCCTCCAAATTGGCGTCCGCCCCAT +
Preference number: 5 (lower is better)
Translates to: ARRVLHRLFSWPDWL*FPSRSQPPNWRPPH
Trigger: ATGGGGCGGACGCCAATTTGGAGGCTGGGAACGTGAAGGAAACCAGAGCCAGTCGGGCCAAGAGAAGAGGCGGTGGAGGACACGACGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316623.10
ENST00000537463.6
ENST00000558230.1
ENST00000560355.1
CDS-3UTR CAA 90 bp GGAGGTGAAGCGGTAGCCGGGCTTACAGTCACAGCGGTAGCTGCCTGCAGTGTTCCACCGCCTCTTCTCTaGGCCCGACTGGCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: GGEAVAGLTVTAVAACSVPPPLL*ARLALV
Trigger: AACCAGAGCCAGTCGGGCCAAGAGAAGAGGCGGTGG...AACACTGCAGGCAGCTACCGCTGTGACTGTAAGCCCGGCTACCGCTTCACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS CCA 90 bp CGGGTCCTCTCGGACACAGCTCCTCGTACTCAGGAGTATTTCTCATaGGACACTCCTCGCATTCCTCAGTACCCCAGGCTGCCCCGACGG +
Preference number: 5 (lower is better)
Translates to: RVLSDTAPRTQEYFS*DTPRIPQYPRLPRR
Trigger: CCGTCGGGGCAGCCTGGGGTACTGAGGAATGCGAGGAGTGTCCCATGAGAAATACTCCTGAGTACGAGGAGCTGTGTCCGAGAGGACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS-3UTR CAA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCACTGTTCACAGGGCTaGTTCCACGCCCGGCCAATG +
Preference number: 5 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGHCSQG*FHARPM
Trigger: CATTGGCCGGGCGTGGAACAAGCCCTGTGAACAGTG...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCAGGCACTCGTCCTGGTaGGGGCTGGCGGTAAACCCA +
Preference number: 5 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRRHSSW*GLAVNP
Trigger: TGGGTTTACCGCCAGCCCCAACCAGGACGAGTGCCT...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCACTGTTCACAGGGCTaGTTCCACGCCCGGCCAATG +
Preference number: 5 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRHCSQG*FHARPM
Trigger: CATTGGCCGGGCGTGGAACAAGCCCTGTGAACAGTG...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGTTGATGCATTCGGCGTaGCGCTGGCACACTGGGCCG +
Preference number: 5 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLLMHSA*RWHTGP
Trigger: CGGCCCAGTGTGCCAGCGCAACGCCGAATGCATCAA...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGGGACCCATCCAAGTTTaGACAGGTACCTGGTGCACA +
Preference number: 5 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLGPIQV*TGTWCT
Trigger: TGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCC...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGGCTCCTTCCATCCTCTaGCAGAATGTAGCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLAPSIL*QNVAFR
Trigger: CCGAAAGGCTACATTCTGCAAGAGGATGGAAGGAGC...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS GCA 90 bp GGCAGCAGCCAGAGATTTCTATTGAGGACATTGGATCTGGCCACTTaGTGCCGGCCAGCTGGCCCTCAGCTAGGCTCTCAGGAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: GSSQRFLLRTLDLAT*CRPAGPQLGSQEGK
Trigger: CTTACCTTCCTGAGAGCCTAGCTGAGGGCCAGCTGGCCGGCAGCAAGTGGCCAGATCCAATGTCCTCAATAGAAATCTCTGGCTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS CCA 90 bp CAGCACCCTTGGTGGCTCCCGAGATGGATACAGATATTCCACTGGTaGTCGAGGGACCGGAATTTGAGGTCCAGGAGGAAAGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: QHPWWLPRWIQIFHW*SRDRNLRSRRKARR
Trigger: CCTCCTGGCTTTCCTCCTGGACCTCAAATTCCGGTCCCTCGACCACCAGTGGAATATCTGTATCCATCTCGGGAGCCACCAAGGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS CCA 90 bp TGGCAGCACCCTTGGTGGCTCCCGAGATGGATACAGATATTCCACTaGTGGTCGAGGGACCGGAATTTGAGGTCCAGGAGGAAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: WQHPWWLPRWIQIFH*WSRDRNLRSRRKAR
Trigger: CCTGGCTTTCCTCCTGGACCTCAAATTCCGGTCCCTCGACCACCAGTGGAATATCTGTATCCATCTCGGGAGCCACCAAGGGTGCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTTTCCCAGCCTCCAAATaGGCGTCCGCCCCATGGCTC +
Preference number: 5 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFFPASK*ASAPWL
Trigger: GAGCCATGGGGCGGACGCCAATTTGGAGGCTGGGAA...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTTGATGCATTCGGCGTaGCGCTGGCACACTGGGCCG +
Preference number: 5 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSLMHSA*RWHTGP
Trigger: CGGCCCAGTGTGCCAGCGCAACGCCGAATGCATCAA...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGCAGCAGCATTCCGATTaGGTGACGGGGTTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: WTATQVTALGIGTAIAAGQQHSD*VTGFLL
Trigger: CAACAGGAACCCCGTCACCAAATCGGAATGCTGCTG...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGATAAAATTGCAGGGTTaGGGAGCCTGGTTGCACTCG +
Preference number: 5 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLIKLQG*GAWLHS
Trigger: CGAGTGCAACCAGGCTCCCAAACCCTGCAATTTTAT...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTCAGTACCCTTCCCGATaGTCCTGGGTGAGAAGAAGC +
Preference number: 5 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVQYPSR*SWVRRS
Trigger: GCTTCTTCTCACCCAGGACAATCGGGAAGGGTACTG...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TCATTGATGTCTTGGCATCCTCCACTGAACTGTTCATACTGGAAGCCGGCGGGATTGATGCATTCGGCGTaGCGCTGGCACACTGGGCCG +
Preference number: 5 (lower is better)
Translates to: SLMSWHPPLNCSYWKPAGLMHSA*RWHTGP
Trigger: CGGCCCAGTGTGCCAGCGCAACGCCGAATGCATCAA...TCCCGCCGGCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAGACATCAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GGAGGTGAAGCGGTAGCCGGGCTTACAGTCACAGCGGTAGCTGCCTGCAGTGTTGCTCATTCGCAAATCTaGGCACCTTCTTCCACTGGA +
Preference number: 5 (lower is better)
Translates to: GGEAVAGLTVTAVAACSVAHSQI*APSSTG
Trigger: TCCAGTGGAAGAAGGTGCCAAGATTTGCGAATGAGC...AACACTGCAGGCAGCTACCGCTGTGACTGTAAGCCCGGCTACCGCTTCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp GGAGGTGAAGCGGTAGCCGGGCTTACAGTCACAGCGGTAGCTGCCTGCAGTGTTCTTCACATGTCATCATaGGACCGGGCTCAAATCCCT +
Preference number: 5 (lower is better)
Translates to: GGEAVAGLTVTAVAACSVLHMSS*DRAQIP
Trigger: AGGGATTTGAGCCCGGTCCAATGATGACATGTGAAG...AACACTGCAGGCAGCTACCGCTGTGACTGTAAGCCCGGCTACCGCTTCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCTTCACATGTCATCATaGGACCGGGCTCAAATCCCT +
Preference number: 5 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGLHMSS*DRAQIP
Trigger: AGGGATTTGAGCCCGGTCCAATGATGACATGTGAAG...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAAGGCACTCGTCCTGGTaGGGGCTGGCGGTAAACCCA +
Preference number: 5 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGRHSSW*GLAVNP
Trigger: TGGGTTTACCGCCAGCCCCAACCAGGACGAGTGCCT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAATCCCCGCTGGCATTCAGCAGCATTCCGATTaGGTGACGGGGTTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: PRLHSWSRSDQVRIPAGIQQHSD*VTGFLL
Trigger: CAACAGGAACCCCGTCACCAAATCGGAATGCTGCTG...AATGCCAGCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCGGTTTGGGAGCCTGGTaGCACTCGTTCAGATCTACA +
Preference number: 5 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRGLGAW*HSFRST
Trigger: TGTAGATCTGAACGAGTGCAACCAGGCTCCCAAACC...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCAATCCGGGAGGACATTaGCATGTGAAGCCGCCAATG +
Preference number: 5 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRNPGGH*HVKPPM
Trigger: CATTGGCGGCTTCACATGCAAATGTCCTCCCGGATT...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGGCAGGACGTATGGTGTaGGGTAAATCCGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLAGRMV*GKSGRT
Trigger: TGTCCTCCCGGATTTACCCAACACCATACGTCCTGC...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGAGAAACACAGTGCCCTaGGCCTATGCGGAAGTAACC +
Preference number: 5 (lower is better)
Translates to: WTATQVTALGIGTAIAAGRNTVP*AYAEVT
Trigger: GGTTACTTCCGCATAGGCCAAGGGCACTGTGTTTCT...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGAGGCATCAGTTTCGTTaGTGCTTCTCCGTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGRHQFR*CFSVSC
Trigger: GCAGGAAACGGAGAAGCACAAACGAAACTGATGCCT...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS TCA 90 bp GAGTTGAATGGTAGCCAGGGTTGCAGGCACACTGATACTTCCCTATaGGGTTCACGCAACGGCCATTGGGGCACAGGTGTGCACTCAGCT +
Preference number: 5 (lower is better)
Translates to: ELNGSQGCRHTDTSL*GSRNGHWGTGVHSA
Trigger: AGCTGAGTGCACACCTGTGCCCCAATGGCCGTTGCGTGAACCTCATAGGGAAGTATCAGTGTGCCTGCAACCCTGGCTACCATTCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS GCA 90 bp AGCAGCCAGAGATTTCTATTGAGGACATTGGATCTGGCCACTTGCTaGCGGCCAGCTGGCCCTCAGCTAGGCTCTCAGGAAGGTAAGACA +
Preference number: 5 (lower is better)
Translates to: SSQRFLLRTLDLATC*RPAGPQLGSQEGKT
Trigger: TGTCTTACCTTCCTGAGAGCCTAGCTGAGGGCCAGCTGGCCGGCAGCAAGTGGCCAGATCCAATGTCCTCAATAGAAATCTCTGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS CCA 90 bp CCGCAGGCTGCTTTCCCTGTCAGCCTATTTCAGGATATGCTGATCTaGCAAAGGCTGATATCCTGCCCCAAGTGTCTGCCCCACGTGTCT +
Preference number: 5 (lower is better)
Translates to: PQAAFPVSLFQDMLI*QRLISCPKCLPHVS
Trigger: AGACACGTGGGGCAGACACTTGGGGCAGGATATCAGCCTTTGCCAGATCAGCATATCCTGAAATAGGCTGACAGGGAAAGCAGCCTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS-3UTR CAA 90 bp CACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTCTTCCCAGCCTCCAAATaGGCGTCCGCCCCATGGCTC +
Preference number: 5 (lower is better)
Translates to: HQLQFHCCRLYLHCLLEVFPASK*ASAPWL
Trigger: GAGCCATGGGGCGGACGCCAATTTGGAGGCTGGGAA...GACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp GGAGGTGAAGCGGTAGCCGGGCTTACAGTCACAGCGGTAGCTGCCTGCAGTGTTACACACCTTCCTCCATaGAGACAGCCACTTTCACAA +
Preference number: 5 (lower is better)
Translates to: GGEAVAGLTVTAVAACSVTHLPP*RQPLSQ
Trigger: TTGTGAAAGTGGCTGTCTCAATGGAGGAAGGTGTGT...AACACTGCAGGCAGCTACCGCTGTGACTGTAAGCCCGGCTACCGCTTCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCATGGTGTTTCTGCACTaGCCGTGGGTGCAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: WSSQTSMHVWASHRNFITMVFLH*PWVQRL
Trigger: CAGCCTCTGCACCCACGGCAAGTGCAGAAACACCAT...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGTCAGGTAGTAGCCGGTaGGACAGCGGCACTGGAAAC +
Preference number: 5 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVSGSSR*DSGTGN
Trigger: GTTTCCAGTGCCGCTGTCCAACCGGCTACTACCTGA...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CAA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCGCTCATTCGCAAATCTaGGCACCTTCTTCCACTGGA +
Preference number: 5 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRAHSQI*APSSTG
Trigger: TCCAGTGGAAGAAGGTGCCAAGATTTGCGAATGAGC...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTTCGATATCTGCTCCATaGGTCATGAATCCTCGGCCA +
Preference number: 5 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVSISAP*VMNPRP
Trigger: TGGCCGAGGATTCATGACCAATGGAGCAGATATCGA...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp ACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCATTCCAGAAACACAGTGGCTCCTTCCATCCTCTaGCAGAATGTAGCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: TDRWLWVSSAHAHSRNTVAPSIL*QNVAFR
Trigger: CCGAAAGGCTACATTCTGCAAGAGGATGGAAGGAGC...CACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS GCA 90 bp CAACATCAATACACTCCCCACGGAGGTCCAGCTGGAACCCTTTGTTaGACTCACACCGGTAACTCCCAGGAGTTGGAATGCAGCGTCCAT +
Preference number: 5 (lower is better)
Translates to: QHQYTPHGGPAGTLC*THTGNSQELECSVH
Trigger: ATGGACGCTGCATTCCAACTCCTGGGAGTTACCGGTGTGAGTGCAACAAAGGGTTCCAGCTGGACCTCCGTGGGGAGTGTATTGATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS GCA 90 bp GTCAGCCTATTTCAGGATATGCTGATCTGGCAAAGGCTGATATCCTaGCCCAAGTGTCTGCCCCACGTGTCTGCCCCACTTGGACTTCCT +
Preference number: 5 (lower is better)
Translates to: VSLFQDMLIWQRLIS*PKCLPHVSAPLGLP
Trigger: AGGAAGTCCAAGTGGGGCAGACACGTGGGGCAGACACTTGGGGCAGGATATCAGCCTTTGCCAGATCAGCATATCCTGAAATAGGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS-3UTR CAA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGCACTGTTCACAGGGCTaGTTCCACGCCCGGCCAATG +
Preference number: 5 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLHCSQG*FHARPM
Trigger: CATTGGCCGGGCGTGGAACAAGCCCTGTGAACAGTG...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp ATGACGTCAAGGCACTCGTCCTGGTTGGGGCTGGCGGTAAACCCATCATTACACGGACCCATCCAAGTTTaGACAGGTACCTGGTGCACA +
Preference number: 5 (lower is better)
Translates to: MTSRHSSWLGLAVNPSLHGPIQV*TGTWCT
Trigger: TGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCC...GTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAGTGCCTTGACGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACAGGCACTCGTCCTGGTaGGGGCTGGCGGTAAACCCA +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYRHSSW*GLAVNP
Trigger: TGGGTTTACCGCCAGCCCCAACCAGGACGAGTGCCT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp ACGGGTGTTGAGGCAGCGCCCATTCTCACAGATCCCTGGCTTCGTCTGACATTCATAAAATTGCAGGGTTaGGGAGCCTGGTTGCACTCG +
Preference number: 5 (lower is better)
Translates to: TGVEAAPILTDPWLRLTFIKLQG*GAWLHS
Trigger: CGAGTGCAACCAGGCTCCCAAACCCTGCAATTTTAT...GAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGCGCTGCCTCAACACCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CAA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGTCTCAACATCCCAACTaGCAAGACTCACATTGGCTT +
Preference number: 5 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGSQHPN*QDSHWL
Trigger: AAGCCAATGTGAGTCTTGCAAGTTGGGATGTTGAGA...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS TCA 90 bp GGAGTCTTCCACAGGGAGAGTCATCCTGCCCGTTGTTCTGGATCTTaGAACTTGGGAGACCCACACCAAAGGAGGGAACCGGTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: GVFHRESHPARCSGS*NLGDPHQRREPVPL
Trigger: TAAAGGAACCGGTTCCCTCCTTTGGTGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACGGGCAGGATGACTCTCCCTGTGGAAGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS GCA 90 bp CCCAGGTACCTGTTCTGGGAGATGAATAATGCCTTCTGGTATGTCTaGTCCCATCACCGAATCGGCCCCCTCCTTATTCAAACCAGCCTC +
Preference number: 5 (lower is better)
Translates to: PRYLFWEMNNAFWYV*SHHRIGPLLIQTSL
Trigger: GAGGCTGGTTTGAATAAGGAGGGGGCCGATTCGGTGATGGGAGCAGACATACCAGAAGGCATTATTCATCTCCCAGAACAGGTACCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS CCA 90 bp CAGCTGGAACCCTTTGTTGCACTCACACCGGTAACTCCCAGGAGTTaGAATGCAGCGTCCATTTTGACAGAGATAGCGGACCAACTGGCA +
Preference number: 5 (lower is better)
Translates to: QLEPFVALTPVTPRS*NAASILTEIADQLA
Trigger: TGCCAGTTGGTCCGCTATCTCTGTCAAAATGGACGCTGCATTCCAACTCCTGGGAGTTACCGGTGTGAGTGCAACAAAGGGTTCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS-3UTR CAA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCAGCAGCACTGCATTTaGGTTATGGACTGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFQQHCI*VMDCGS
Trigger: GCTGCCACAGTCCATAACCAAAATGCAGTGCTGCTG...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCGAGCCTGGGCTGTTCTaGCAGACTCCATTAATGCAA +
Preference number: 5 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSEPGLF*QTPLMQ
Trigger: TTGCATTAATGGAGTCTGCAAGAACAGCCCAGGCTC...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCCTCAGCTCACATTCATaGATGTCGATACACGCGGAG +
Preference number: 5 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSLSSHS*MSIHAE
Trigger: CTCCGCGTGTATCGACATCAATGAATGTGAGCTGAG...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCGATCCCATGGTATTCTaGCAGTCTGCATGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSDPMVF*QSACWL
Trigger: CAGCCAGCATGCAGACTGCAAGAATACCATGGGATC...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAATCCCCGCTGGCATTCAAACTCATCTGTACTaGGGATGGGACACTGTTCAC +
Preference number: 5 (lower is better)
Translates to: PRLHSWSRSDQVRIPAGIQTHLY*GWDTVH
Trigger: GTGAACAGTGTCCCATCCCAAGTACAGATGAGTTTG...AATGCCAGCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCGGACCCATCCAAGTTTaGACAGGTACCTGGTGCACA +
Preference number: 5 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSGPIQV*TGTWCT
Trigger: TGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCC...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp TGGACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGTATGATCCTCTGTCATaGACACATTCCCCATTTCGG +
Preference number: 5 (lower is better)
Translates to: WTATQVTALGIGTAIAAGYDPLS*THSPFR
Trigger: CCGAAATGGGGAATGTGTCAATGACAGAGGATCATA...CCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGAATCCGGGAGGACATTaGCATGTGAAGCCGCCAATG +
Preference number: 5 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVNPGGH*HVKPPM
Trigger: CATTGGCGGCTTCACATGCAAATGTCCTCCCGGATT...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAGCAGGACGTATGGTGTaGGGTAAATCCGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGAGRMV*GKSGRT
Trigger: TGTCCTCCCGGATTTACCCAACACCATACGTCCTGC...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp ATCAGGTCTCCGCTGATACCCGGGTCCACAGATGCACATATATGTGCCAATGAGGCAGGACGTATGGTGTaGGGTAAATCCGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: IRSPLIPGSTDAHICANEAGRMV*GKSGRT
Trigger: TGTCCTCCCGGATTTACCCAACACCATACGTCCTGC...CTCATTGGCACATATATGTGCATCTGTGGACCCGGGTATCAGCGGAGACCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS TCA 90 bp AATCGGCCCCCTCCTTATTCAAACCAGCCTCCTGCCCAGAGTGTCTaGGCCCTGTCTAAAACTAAGTGTGGCTGGAAGAGATTTGGTGCA +
Preference number: 5 (lower is better)
Translates to: NRPPPYSNQPPAQSV*ALSKTKCGWKRFGA
Trigger: TGCACCAAATCTCTTCCAGCCACACTTAGTTTTAGACAGGGCTCAGACACTCTGGGCAGGAGGCTGGTTTGAATAAGGAGGGGGCCGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS CCA 90 bp TCCACAGGGAGAGTCATCCTGCCCGTTGTTCTGGATCTTGAAACTTaGGAGACCCACACCAAAGGAGGGAACCGGTTCCTTTACCCTTTA +
Preference number: 5 (lower is better)
Translates to: STGRVILPVVLDLET*ETHTKGGNRFLYPL
Trigger: TAAAGGGTAAAGGAACCGGTTCCCTCCTTTGGTGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACGGGCAGGATGACTCTCCCTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGTGCATGCACATCGATTaGGGGCCACACACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLCMHID*GPHTFL
Trigger: GAGGAAGGTGTGTGGCCCCAAATCGATGTGCATGCA...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAGCATTCATCCACATCTaGACAAGCTCCCGTGCGGAT +
Preference number: 5 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGAFIHI*TSSRAD
Trigger: ATCCGCACGGGAGCTTGTCAAGATGTGGATGAATGC...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACTCGAGGGACCGGAATTaGAGGTCCAGGAGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYSRDRN*RSRRKA
Trigger: GGCTTTCCTCCTGGACCTCAAATTCCGGTCCCTCGA...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACTTACTGGCAGCACCCTaGGTGGCTCCCGAGATGGAT +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYLLAAP*VAPEMD
Trigger: ATCCATCTCGGGAGCCACCAAGGGTGCTGCCAGTAA...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCGGTAACTCCCAGGAGTaGGAATGCAGCGTCCATTTT +
Preference number: 5 (lower is better)
Translates to: WSSQTSMHVWASHRNFITGNSQE*ECSVHF
Trigger: AAAATGGACGCTGCATTCCAACTCCTGGGAGTTACC...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTATAGCCTATCGGGAGTaGAATGGTAGCCAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLIAYRE*NGSQGC
Trigger: GCAACCCTGGCTACCATTCAACTCCCGATAGGCTAT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACTCAGGTAGTAGCCGGTaGGACAGCGGCACTGGAAAC +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYSGSSR*DSGTGN
Trigger: GTTTCCAGTGCCGCTGTCCAACCGGCTACTACCTGA...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGCAGCAGCACATCTTCTaGGTCATGTTGAATAACAAT +
Preference number: 5 (lower is better)
Translates to: LGLCGSNQVDSHTGNRPRQQHIF*VMLNNN
Trigger: ATTGTTATTCAACATGACCAAGAAGATGTGCTGCTG...CCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GCACTGTCCATGTTTACAGACATCGGGTTCTTTGCATTCGTCCATATCAACTGCCACTGTTCACAGGGCTaGTTCCACGCCCGGCCAATG +
Preference number: 5 (lower is better)
Translates to: ALSMFTDIGFFAFVHINCHCSQG*FHARPM
Trigger: CATTGGCCGGGCGTGGAACAAGCCCTGTGAACAGTG...GCAGTTGATATGGACGAATGCAAAGAACCCGATGTCTGTAAACATGGACAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp CAGGGTGTTGTGACAGGAGGCTCCTCCGCAGATGTGAGCGCTGAGGCATTCGTTTCTAGAAGACATTCATaGATATCCACACAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: QGVVTGGSSADVSAEAFVSRRHS*ISTQVL
Trigger: GAGGACCTGTGTGGATATCAATGAATGTCTTCTAGA...AACGAATGCCTCAGCGCTCACATCTGCGGAGGAGCCTCCTGTCACAACACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGGCTCATTCGCAAATCTaGGCACCTTCTTCCACTGGA +
Preference number: 5 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMAHSQI*APSSTG
Trigger: TCCAGTGGAAGAAGGTGCCAAGATTTGCGAATGAGC...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGCCTGGTTCTTGCATTCCATTaGTTTTTCAGTACAGTCATG +
Preference number: 5 (lower is better)
Translates to: ATQVTALGIGTAIAAGGLVLAFH*FFSTVM
Trigger: CATGACTGTACTGAAAAACAAATGGAATGCAAGAAC...CAGGCCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGCAGCAGCATTCCGATTaGGTGACGGGGTTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLQQHSD*VTGFLL
Trigger: CAACAGGAACCCCGTCACCAAATCGGAATGCTGCTG...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp ACGGGTGTTGAGGCAGCGCCCATTCTCACAGATCCCTGGCTTCGTCTGACATTCTATGATCCTCTGTCATaGACACATTCCCCATTTCGG +
Preference number: 5 (lower is better)
Translates to: TGVEAAPILTDPWLRLTFYDPLS*THSPFR
Trigger: CCGAAATGGGGAATGTGTCAATGACAGAGGATCATA...GAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGCGCTGCCTCAACACCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CAA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAGGTTTGGGAGCCTGGTaGCACTCGTTCAGATCTACA +
Preference number: 5 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGGLGAW*HSFRST
Trigger: TGTAGATCTGAACGAGTGCAACCAGGCTCCCAAACC...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCTCCCTTCTGTGTTTTaGCAGATAAAATTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRLPSVF*QIKLQG
Trigger: ACCCTGCAATTTTATCTGCAAAAACACAGAAGGGAG...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGCTCCTTCCATCCTCTaGCAGAATGTAGCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLAPSIL*QNVAFR
Trigger: CCGAAAGGCTACATTCTGCAAGAGGATGGAAGGAGC...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp AACACAGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTACACTCATCAAGATCTTaGCAGCTCCTTCCATCCTCT +
Preference number: 5 (lower is better)
Translates to: NTVPLAYAEVTRWTATQVHSSRS*QLLPSS
Trigger: AGAGGATGGAAGGAGCTGCAAAGATCTTGATGAGTG...TACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCCATAGGAACTGGCAGTaGTGTTGCTTGGTTGCACAC +
Preference number: 5 (lower is better)
Translates to: WSSQTSMHVWASHRNFITHRNWQ*CCLVAH
Trigger: GTGTGCAACCAAGCAACACAACTGCCAGTTCCTATG...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCATAGGAACTGGCAGTaGTGTTGCTTGGTTGCACAC +
Preference number: 5 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMHRNWQ*CCLVAH
Trigger: GTGTGCAACCAAGCAACACAACTGCCAGTTCCTATG...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTAATCCGGGAGGACATTaGCATGTGAAGCCGCCAATG +
Preference number: 5 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLNPGGH*HVKPPM
Trigger: CATTGGCGGCTTCACATGCAAATGTCCTCCCGGATT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp ACGGGTGTTGAGGCAGCGCCCATTCTCACAGATCCCTGGCTTCGTCTGACATTCACATTCATTGATGTCTaGGCATCCTCCACTGAACTG +
Preference number: 5 (lower is better)
Translates to: TGVEAAPILTDPWLRLTFTFIDV*ASSTEL
Trigger: CAGTTCAGTGGAGGATGCCAAGACATCAATGAATGT...GAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGCGCTGCCTCAACACCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CAA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAAGAAACACAGTGCCCTaGGCCTATGCGGAAGTAACC +
Preference number: 5 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGRNTVP*AYAEVT
Trigger: GGTTACTTCCGCATAGGCCAAGGGCACTGTGTTTCT...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS GCA 90 bp CCTGTAATCTCTTTCACACTGGGGTCCAGTAAATCCGTAAGTGCATaGACATCGATTTGGGGCCACACACCTTCCTCCATTGAGACAGCC +
Preference number: 5 (lower is better)
Translates to: PVISFTLGSSKSVSA*TSIWGHTPSSIETA
Trigger: GGCTGTCTCAATGGAGGAAGGTGTGTGGCCCCAAATCGATGTGCATGCACTTACGGATTTACTGGACCCCAGTGTGAAAGAGATTACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000537463.6
CDS GCA 90 bp ATTCATTTATATCACTGCCTGCTGACGTCATTCCTGGCCCACTGCTaGAGAGTGCCTGATATTCCGCTGAATTCTGTGCAGGACACGGCT +
Preference number: 5 (lower is better)
Translates to: IHLYHCLLTSFLAHC*RVPDIPLNSVQDTA
Trigger: AGCCGTGTCCTGCACAGAATTCAGCGGAATATCAGGCACTCTGCAGCAGTGGGCCAGGAATGACGTCAGCAGGCAGTGATATAAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS GCA 90 bp CACATTCATTTATATCACTGCCTGCTGACGTCATTCCTGGCCCACTaGTGCAGAGTGCCTGATATTCCGCTGAATTCTGTGCAGGACACG +
Preference number: 5 (lower is better)
Translates to: HIHLYHCLLTSFLAH*CRVPDIPLNSVQDT
Trigger: CGTGTCCTGCACAGAATTCAGCGGAATATCAGGCACTCTGCAGCAGTGGGCCAGGAATGACGTCAGCAGGCAGTGATATAAATGAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS GCA 90 bp ATACTTCCCTATGAGGTTCACGCAACGGCCATTGGGGCACAGGTGTaGACTCAGCTCACATTCATTGATGTCGATACACGCGGAGATGTT +
Preference number: 5 (lower is better)
Translates to: ILPYEVHATAIGAQV*TQLTFIDVDTRGDV
Trigger: AACATCTCCGCGTGTATCGACATCAATGAATGTGAGCTGAGTGCACACCTGTGCCCCAATGGCCGTTGCGTGAACCTCATAGGGAAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CCA 90 bp AAGTGTGGCTGGAAGAGATTTGGTGCAGACTTCACAAGCAGTAATTaGGGAAAACCCACAAGTGAGACAGAAGCTGCAGGGCTGGCTACC +
Preference number: 5 (lower is better)
Translates to: KCGWKRFGADFTSSN*GKPTSETEAAGLAT
Trigger: GGTAGCCAGCCCTGCAGCTTCTGTCTCACTTGTGGGTTTTCCCCAATTACTGCTTGTGAAGTCTGCACCAAATCTCTTCCAGCCACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS-3UTR CAA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATGACAATCCCGCTGAGTaGTCCCTGGCACATCTGGTT +
Preference number: 5 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHDNPAE*SLAHLV
Trigger: AACCAGATGTGCCAGGGACAACTCAGCGGGATTGTC...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGTGGCTCCATTGATGTaGATCTCACATCGCCCATCA +
Preference number: 5 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLVAPLM*ISHRPS
Trigger: TGATGGGCGATGTGAGATCAACATCAATGGAGCCAC...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp AGGGAGCACTCATCAATATCTTCACAGGCTTTCCCGTCAGCACTGGGCACGAAGCACAGCCAACTCGAGTaGGGTTCAGTTCAAAATCAG +
Preference number: 5 (lower is better)
Translates to: REHSSISSQAFPSALGTKHSQLE*GSVQNQ
Trigger: CTGATTTTGAACTGAACCCAACTCGAGTTGGCTGTG...CTTCGTGCCCAGTGCTGACGGGAAAGCCTGTGAAGATATTGATGAGTGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTCAGGCTGTATCTCCATaGTCTCCTCGAGGTCGAATA +
Preference number: 5 (lower is better)
Translates to: YCTCCDEGCTGDPLATEAQAVSP*SPRGRI
Trigger: TATTCGACCTCGAGGAGACAATGGAGATACAGCCTG...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp AGGGAGCACTCATCAATATCTTCACAGGCTTTCCCGTCAGCACTGGGCACGAAGCCAACTCCAATTTCATaGCTGCAGGCTGTATCTCCA +
Preference number: 5 (lower is better)
Translates to: REHSSISSQAFPSALGTKPTPIS*LQAVSP
Trigger: TGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGG...CTTCGTGCCCAGTGCTGACGGGAAAGCCTGTGAAGATATTGATGAGTGCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp GCGCCCATTCTCACAGATCCCTGGCTTCGTCTGACATTCATTCTCATCTACACAGACAAAGCCTGGCCTTaGACTTCCACAGAGTGTAGC +
Preference number: 5 (lower is better)
Translates to: APILTDPWLRLTFILIYTDKAWP*TSTECS
Trigger: GCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGTC...TGTGTAGATGAGAATGAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CAA 90 bp ACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCATTCCAGAAACACAGTGAAGCTGCCAACCATGTaGATACACACTCCATTTTCA +
Preference number: 5 (lower is better)
Translates to: TDRWLWVSSAHAHSRNTVKLPTM*IHTPFS
Trigger: TGAAAATGGAGTGTGTATCAACATGGTTGGCAGCTT...CACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTCATTACGATCATaGCACTGTCCTGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFHSLRS*HCPVEV
Trigger: CACCTCCACAGGACAGTGCAATGATCGTAATGAATG...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp GAATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCATTCATTACGATCATaGCACTGTCCTGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ELSSISPLTGGSGFPRPMHSLRS*HCPVEV
Trigger: CACCTCCACAGGACAGTGCAATGATCGTAATGAATG...CATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp CTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGGTCCAAGCACATGGTTaGGTCATCATTTGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: LGLCGSNQVDSHTGNRPRVQAHG*VIICFK
Trigger: TTTAAAACAAATGATGACCAAACCATGTGCTTGGAC...CCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GACAGCCACACAGGTAACCGCCCTCGGTATTGGAACAGCCATAGCTGCAGGGGGGTCCAAGCACATGGTTaGGTCATCATTTGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: DSHTGNRPRYWNSHSCRGVQAHG*VIICFK
Trigger: TTTAAAACAAATGATGACCAAACCATGTGCTTGGAC...CCCCCTGCAGCTATGGCTGTTCCAATACCGAGGGCGGTTACCTGTGTGGCTGTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCTCTGGACACAGACATTaGAAGCTGCCTTCAGTGTTA +
Preference number: 5 (lower is better)
Translates to: AGRMVLGKSGRTFACEAASGHRH*KLPSVL
Trigger: TAACACTGAAGGCAGCTTCAAATGTCTGTGTCCAGA...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCAATGTCGATATCTGCTCCATaGGTCATGAATCCTCGGCCA +
Preference number: 5 (lower is better)
Translates to: DVWCWVNPGGHLHVKPPMSISAP*VMNPRP
Trigger: TGGCCGAGGATTCATGACCAATGGAGCAGATATCGA...CATTGGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTATAAAATTGCAGGGTTaGGGAGCCTGGTTGCACTCG +
Preference number: 5 (lower is better)
Translates to: YCTCCDEGCTGDPLATEAIKLQG*GAWLHS
Trigger: CGAGTGCAACCAGGCTCCCAAACCCTGCAATTTTAT...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CCACGTCTTCACAGCTGGAGCCGGTCTGATCAAGTGAGAATCCCCGCTGGCATTAGTTGTGTTGCTTGGTaGCACACTCATCAAGATCTT +
Preference number: 5 (lower is better)
Translates to: PRLHSWSRSDQVRIPAGISCVAW*HTHQDL
Trigger: AAGATCTTGATGAGTGTGCAACCAAGCAACACAACT...AATGCCAGCGGGGATTCTCACTTGATCAGACCGGCTCCAGCTGTGAAGACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTGAACTGGCAGTTGTGTaGCTTGGTTGCACACTCATC +
Preference number: 5 (lower is better)
Translates to: SSILEASVSFVLLRFLPRELAVV*LGCTLI
Trigger: GATGAGTGTGCAACCAAGCAACACAACTGCCAGTTC...ACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp ATGACGTCAAGGCACTCGTCCTGGTTGGGGCTGGCGGTAAACCCATCATTACACCTGACGTGGGAAATATaGAAAGCAAAGATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: MTSRHSSWLGLAVNPSLHLTWEI*KAKMAV
Trigger: GACAGCCATCTTTGCTTTCAATATTTCCCACGTCAG...GTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAGTGCCTTGACGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CAA 90 bp AACACAGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAAGAGTAGTCCATCAATaGAAAGCACATTCCCGTACG +
Preference number: 5 (lower is better)
Translates to: NTVPLAYAEVTRWTATQVRVVHQ*KAHSRT
Trigger: CGTACGGGAATGTGCTTTCAATTGATGGACTACTCT...TACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CAA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGACATTGACCCCTTGTaGACAGGAATGACCGAGGGT +
Preference number: 5 (lower is better)
Translates to: LDIGGISFVCASPFPAPFDIDPL*TGMTEG
Trigger: ACCCTCGGTCATTCCTGTCAACAAGGGGTCAATGTC...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS TCA 90 bp CCTTGGCTCAACAAGAAAATGATTTATACACTAGAGATAGGTGGCTaGGCTCTGTGTACCCAGTACTCTGGTGACCACGAGCAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PWLNKKMIYTLEIGG*ALCTQYSGDHEQGR
Trigger: CCTGCCCTGCTCGTGGTCACCAGAGTACTGGGTACACAGAGCTCAGCCACCTATCTCTAGTGTATAAATCATTTTCTTGTTGAGCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683268.1
CDS CCA 90 bp TTCACACTGGGGTCCAGTAAATCCGTAAGTGCATGCACATCGATTTaGGGCCACACACCTTCCTCCATTGAGACAGCCACTTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: FTLGSSKSVSACTSI*GHTPSSIETATFTN
Trigger: GTTTGTGAAAGTGGCTGTCTCAATGGAGGAAGGTGTGTGGCCCCAAATCGATGTGCATGCACTTACGGATTTACTGGACCCCAGTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000537463.6
CDS CCA 90 bp CATCACCTGTGTATCCTTCCTTGCACAGACAGCGGTAAGATCCCATaGTATTCTTGCAGTCTGCATGCTGGCTGCACATATGGGTTCCAT +
Preference number: 5 (lower is better)
Translates to: HHLCILPCTDSGKIP*YSCSLHAGCTYGFH
Trigger: ATGGAACCCATATGTGCAGCCAGCATGCAGACTGCAAGAATACCATGGGATCTTACCGCTGTCTGTGCAAGGAAGGATACACAGGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316623.10
ENST00000537463.6
ENST00000684448.1
CDS-3UTR CAA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTTTCCCAGCCTCCAAATaGGCGTCCGCCCCATGGCTC +
Preference number: 5 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRIFPASK*ASAPWL
Trigger: GAGCCATGGGGCGGACGCCAATTTGGAGGCTGGGAA...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTTCACAAACAGGTaGTCCACAGTGAGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: WSSQTSMHVWASHRNFITTFTNR*STVSPY
Trigger: ATAGGGACTCACTGTGGACAACCTGTTTGTGAAAGT...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTCCCTGGCACATCTGGTaGCTGATCACAGTAAAACAT +
Preference number: 5 (lower is better)
Translates to: YCTCCDEGCTGDPLATEAPWHIW*LITVKH
Trigger: ATGTTTTACTGTGATCAGCAACCAGATGTGCCAGGG...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAGCACCAAACAAAGGTTaGATACACTGGCCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGAPNKG*IHWPLL
Trigger: CAAGAGAGGCCAGTGTATCAAACCTTTGTTTGGTGC...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTAGCTGCCTTCAGAGTTaGTGCAGAAGGTTTCACAAC +
Preference number: 5 (lower is better)
Translates to: YCTCCDEGCTGDPLATEASCLQS*CRRFHN
Trigger: GTTGTGAAACCTTCTGCACAAACTCTGAAGGCAGCT...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGGTCCTTCAGGTCACACTCATaGACATCTACACAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: CDEGCTGDPLATEAVSWSFRSHS*TSTQVF
Trigger: GAAGACTTGTGTAGATGTCAATGAGTGTGACCTGAA...GGACCAGGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTTATCCTCCTGGTGCATaGAGGCACTGGCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPYPPGA*RHWPLP
Trigger: TGGCAATGGCCAGTGCCTCAATGCACCAGGAGGATA...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp AGAAAGGATGAAACCATGATTGCAGCGGCAGTTGAAGGAACCAATTGTGTTCCGTATCCTCCTGGTGCATaGAGGCACTGGCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: RKDETMIAAAVEGTNCVPYPPGA*RHWPLP
Trigger: TGGCAATGGCCAGTGCCTCAATGCACCAGGAGGATA...CGGAACACAATTGGTTCCTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTCAAACTCATCTGTACTaGGGATGGGACACTGTTCAC +
Preference number: 5 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLQTHLY*GWDTVH
Trigger: GTGAACAGTGTCCCATCCCAAGTACAGATGAGTTTG...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp TGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCATCGACAAAGCCTGGCCTTaGACTTCCACAGAGTGTAGC +
Preference number: 5 (lower is better)
Translates to: CKTHIGFCLRLILDIGGIDKAWP*TSTECS
Trigger: GCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGTC...GATGCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCCCTCGGTCACTGTATTAATGCATaGGCCATTTCTGCAAAGATT +
Preference number: 5 (lower is better)
Translates to: LAYAEVTRWTATQVTALGHCINA*AISAKI
Trigger: AATCTTTGCAGAAATGGCCAATGCATTAATACAGTG...ACCGAGGGCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTGCATGTGAAGCCGCCTCTAGAAGACATTCATaGATATCCACACAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: AGRMVLGKSGRTFACEAASRRHS*ISTQVL
Trigger: GAGGACCTGTGTGGATATCAATGAATGTCTTCTAGA...GGCGGCTTCACATGCAAATGTCCTCCCGGATTTACCCAACACCATACGTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATGGACCCATCCAAGTTTaGACAGGTACCTGGTGCACA +
Preference number: 5 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHGPIQV*TGTWCT
Trigger: TGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCC...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537463.6
ENST00000674301.1
CDS-3UTR CAA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCTTCACACTTCTCATTTaGAAGACTGTATCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHAFTLLI*KTVSRW
Trigger: CCACCTGGATACAGTCTTCAAAATGAGAAGTGTGAA...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp CTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTCTTCACATGTCATCATaGGACCGGGCTCAAATCCCT +
Preference number: 5 (lower is better)
Translates to: LDIGGISFVCASPFPAPFLHMSS*DRAQIP
Trigger: AGGGATTTGAGCCCGGTCCAATGATGACATGTGAAG...AAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp AGTGCCCTTGGCCTATGCGGAAGTAACCAGGTGGACAGCCACACAGGTAACCGCGTTCTTGCATTCCATTaGTTTTTCAGTACAGTCATG +
Preference number: 5 (lower is better)
Translates to: SALGLCGSNQVDSHTGNRVLAFH*FFSTVM
Trigger: CATGACTGTACTGAAAAACAAATGGAATGCAAGAAC...GCGGTTACCTGTGTGGCTGTCCACCTGGTTACTTCCGCATAGGCCAAGGGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGTCGATATCTGCTCCATaGGTCATGAATCCTCGGCCA +
Preference number: 5 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLSISAP*VMNPRP
Trigger: TGGCCGAGGATTCATGACCAATGGAGCAGATATCGA...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTTATGATCCTCTGTCATaGACACATTCCCCATTTCGG +
Preference number: 5 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFYDPLS*THSPFR
Trigger: CCGAAATGGGGAATGTGTCAATGACAGAGGATCATA...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp TGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCATCGGTTTGGGAGCCTGGTaGCACTCGTTCAGATCTACA +
Preference number: 5 (lower is better)
Translates to: CKTHIGFCLRLILDIGGIGLGAW*HSFRST
Trigger: TGTAGATCTGAACGAGTGCAACCAGGCTCCCAAACC...GATGCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTCACTCATCAAGATCTTaGCAGCTCCTTCCATCCTCT +
Preference number: 5 (lower is better)
Translates to: SSILEASVSFVLLRFLPRHSSRS*QLLPSS
Trigger: AGAGGATGGAAGGAGCTGCAAAGATCTTGATGAGTG...ACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTTTAGACCCGCACAGATaGATGTCAGAGGTGCATTCA +
Preference number: 5 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGLDPHR*MSEVHS
Trigger: TGAATGCACCTCTGACATCAATCTGTGCGGGTCTAA...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTACATTCATTGATGTCTaGGCATCCTCCACTGAACTG +
Preference number: 5 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFTFIDV*ASSTEL
Trigger: CAGTTCAGTGGAGGATGCCAAGACATCAATGAATGT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCTGACGTGGGAAATATaGAAAGCAAAGATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFLTWEI*KAKMAV
Trigger: GACAGCCATCTTTGCTTTCAATATTTCCCACGTCAG...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCAGAGTAGTCCATCAATaGAAAGCACATTCCCGTACG +
Preference number: 5 (lower is better)
Translates to: WSSQTSMHVWASHRNFITRVVHQ*KAHSRT
Trigger: CGTACGGGAATGTGCTTTCAATTGATGGACTACTCT...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCACAGTACCCTTCCCGATaGTCCTGGGTGAGAAGAAGC +
Preference number: 5 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPQYPSR*SWVRRS
Trigger: GCTTCTTCTCACCCAGGACAATCGGGAAGGGTACTG...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTGTGGCTCCTGTCCGCTaGTGGCACCCACAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRIVAPVR*WHPQSL
Trigger: CAGAGACTGTGGGTGCCACAAGCGGACAGGAGCCAC...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp CCATTTAACCACGTCCTCTCCTTTGGGGCAGAAATCTCTGGGAGTAGGGGCAAGAGTGGATACCATCACTaGGTGACCCAGAGCTATATA +
Preference number: 5 (lower is better)
Translates to: PFNHVLSFGAEISGSRGKSGYHH*VTQSYI
Trigger: TATATAGCTCTGGGTCACCAAGTGATGGTATCCACT...CTTGCCCCTACTCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGTTAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp CCATTTAACCACGTCCTCTCCTTTGGGGCAGAAATCTCTGGGAGTAGGGGCAAGTCACAGCCTAAGTGCTaGGCTCATACAATCATCTTG +
Preference number: 5 (lower is better)
Translates to: PFNHVLSFGAEISGSRGKSQPKC*AHTIIL
Trigger: CAAGATGATTGTATGAGCCAAGCACTTAGGCTGTGA...CTTGCCCCTACTCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGTTAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp CCATTTAACCACGTCCTCTCCTTTGGGGCAGAAATCTCTGGGAGTAGGGGCAAGGTCTACTTATTGAACTaGCCATGTGCCTTGCACACA +
Preference number: 5 (lower is better)
Translates to: PFNHVLSFGAEISGSRGKVYLLN*PCALHT
Trigger: TGTGTGCAAGGCACATGGCAAGTTCAATAAGTAGAC...CTTGCCCCTACTCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGTTAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS TCA 90 bp TCCTGTGGCATCCAAAGTCATTCCACTGGGACACTGACACTTGAATaGCCCCCTAGTGTTAACACACAGGCCATTTTTACACACTCCTGG +
Preference number: 5 (lower is better)
Translates to: SCGIQSHSTGTLTLE*PPSVNTQAIFTHSW
Trigger: CCAGGAGTGTGTAAAAATGGCCTGTGTGTTAACACTAGGGGGTCATTCAAGTGTCAGTGTCCCAGTGGAATGACTTTGGATGCCACAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CCA 90 bp GAGGCATTCGTTTTCATCTGCAGGCAAAATAAGAAGCGGCATGTGTaGCAGCAGCCAGAGATTTCTATTGAGGACATTGGATCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: EAFVFICRQNKKRHV*QQPEISIEDIGSGH
Trigger: GTGGCCAGATCCAATGTCCTCAATAGAAATCTCTGGCTGCTGCCACACATGCCGCTTCTTATTTTGCCTGCAGATGAAAACGAATGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS-3UTR CAA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGAGACACTTCATTAAGTTaGTGTCCAGCAGGGCATTTG +
Preference number: 5 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGDTSLS*CPAGHL
Trigger: CAAATGCCCTGCTGGACACAAACTTAATGAAGTGTC...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACACAGAGCACAGCTTGTaGAAATCCTCGGTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYTEHSL*KSSVAL
Trigger: CAGAGCAACCGAGGATTTCAACAAGCTGTGCTCTGT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACTGCCAGCAAGTGCCCTaGATGGTTTCTATGCAGATG +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYCQQVP*MVSMQM
Trigger: CATCTGCATAGAAACCATCAAGGGCACTTGCTGGCA...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp GAGGTCGAATATCCAAATAGCAATTTCCAGAGCGGGTATCAACACAGCCAACTCGATCCCATGGTATTCTaGCAGTCTGCATGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: EVEYPNSNFQSGYQHSQLDPMVF*QSACWL
Trigger: CAGCCAGCATGCAGACTGCAAGAATACCATGGGATC...GAGTTGGCTGTGTTGATACCCGCTCTGGAAATTGCTATTTGGATATTCGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTAACAGGCCAGGGAGGTaGTGGCAAGTTCCAAAGACA +
Preference number: 5 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPNRPGR*WQVPKT
Trigger: TGTCTTTGGAACTTGCCACAACCTCCCTGGCCTGTT...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCCAGGCTGTATCTCCATaGTCTCCTCGAGGTCGAATA +
Preference number: 5 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFQAVSP*SPRGRI
Trigger: TATTCGACCTCGAGGAGACAATGGAGATACAGCCTG...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGCCAACTCCAATTTCATaGCTGCAGGCTGTATCTCCA +
Preference number: 5 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLPTPIS*LQAVSP
Trigger: TGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGG...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCCCAGGACAAAGAATTTaGTACTCGGATGTGTTCACA +
Preference number: 5 (lower is better)
Translates to: WSSQTSMHVWASHRNFITPGQRI*YSDVFT
Trigger: TGTGAACACATCCGAGTACAAAATTCTTTGTCCTGG...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp AAAGAATTTTGTACTCGGATGTGTTCACAGCAGGACACATCTCACAAGGAGTACTCAGGTAGTAGCCGGTaGGACAGCGGCACTGGAAAC +
Preference number: 5 (lower is better)
Translates to: KEFCTRMCSQQDTSHKEYSGSSR*DSGTGN
Trigger: GTTTCCAGTGCCGCTGTCCAACCGGCTACTACCTGA...GTACTCCTTGTGAGATGTGTCCTGCTGTGAACACATCCGAGTACAAAATTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTGACAAAGCCTGGCCTTaGACTTCCACAGAGTGTAGC +
Preference number: 5 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPDKAWP*TSTECS
Trigger: GCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGTC...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp GAGGTCGAATATCCAAATAGCAATTTCCAGAGCGGGTATCAACACAGCCAACTCGACAAAGCCTGGCCTTaGACTTCCACAGAGTGTAGC +
Preference number: 5 (lower is better)
Translates to: EVEYPNSNFQSGYQHSQLDKAWP*TSTECS
Trigger: GCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGTC...GAGTTGGCTGTGTTGATACCCGCTCTGGAAATTGCTATTTGGATATTCGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp GTTCCCGCCGCTTCTGTCCAGTTCGTAGCCTATCTCACACTCACAGCGGAACAGGTCCAAGCACATGGTTaGGTCATCATTTGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: VPAASVQFVAYLTLTAEQVQAHG*VIICFK
Trigger: TTTAAAACAAATGATGACCAAACCATGTGCTTGGAC...CTGTTCCGCTGTGAGTGTGAGATAGGCTACGAACTGGACAGAAGCGGCGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp GGAACAGCCATAGCTGCAGGGGGCCTGCGCAGAGCCACATTCATTGATGTCTTGCACTGTATTAATGCATaGGCCATTTCTGCAAAGATT +
Preference number: 5 (lower is better)
Translates to: GTAIAAGGLRRATFIDVLHCINA*AISAKI
Trigger: AATCTTTGCAGAAATGGCCAATGCATTAATACAGTG...CAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGGCTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTTTCACACTTCTCATTTaGAAGACTGTATCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFFTLLI*KTVSRW
Trigger: CCACCTGGATACAGTCTTCAAAATGAGAAGTGTGAA...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp TCATTGATGTCTTGGCATCCTCCACTGAACTGTTCATACTGGAAGCCGGCGGGACAGACATCGGGTTCTTaGCATTCGTCCATATCAACT +
Preference number: 5 (lower is better)
Translates to: SLMSWHPPLNCSYWKPAGQTSGS*HSSIST
Trigger: AGTTGATATGGACGAATGCAAAGAACCCGATGTCTG...TCCCGCCGGCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAGACATCAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTTTTTTGCAGATAAAATaGCAGGGTTTGGGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLFLQIK*QGLGAW
Trigger: CCAGGCTCCCAAACCCTGCAATTTTATCTGCAAAAA...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCCTCCCTTCTGTGTTTTaGCAGATAAAATTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSLPSVF*QIKLQG
Trigger: ACCCTGCAATTTTATCTGCAAAAACACAGAAGGGAG...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTAGTTGTGTTGCTTGGTaGCACACTCATCAAGATCTT +
Preference number: 5 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFSCVAW*HTHQDL
Trigger: AAGATCTTGATGAGTGTGCAACCAAGCAACACAACT...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACGAACTGGCAGTTGTGTaGCTTGGTTGCACACTCATC +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYELAVV*LGCTLI
Trigger: GATGAGTGTGCAACCAAGCAACACAACTGCCAGTTC...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CCAGGAGTGTTCTGGCAAATGCCCTTAGACCCGCACAGATTGATGTCAGAGGTGTCAGAGGTGCATTCATaGTTATCAATGCAGGACGTA +
Preference number: 5 (lower is better)
Translates to: PGVFWQMPLDPHRLMSEVSEVHS*LSMQDV
Trigger: TACGTCCTGCATTGATAACAATGAATGCACCTCTGA...CACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACAGGCATCAGTTTCGTTaGTGCTTCTCCGTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYRHQFR*CFSVSC
Trigger: GCAGGAAACGGAGAAGCACAAACGAAACTGATGCCT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAGCTCCTTCCATCCAGGCATCAGTTTCGTTaGTGCTTCTCCGTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: QLCCLVAHSSRSLQLLPSRHQFR*CFSVSC
Trigger: GCAGGAAACGGAGAAGCACAAACGAAACTGATGCCT...GGATGGAAGGAGCTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TCATTGATGTCTTGGCATCCTCCACTGAACTGTTCATACTGGAAGCCGGCGGGATCTCAACATCCCAACTaGCAAGACTCACATTGGCTT +
Preference number: 5 (lower is better)
Translates to: SLMSWHPPLNCSYWKPAGSQHPN*QDSHWL
Trigger: AAGCCAATGTGAGTCTTGCAAGTTGGGATGTTGAGA...TCCCGCCGGCTTCCAGTATGAACAGTTCAGTGGAGGATGCCAAGACATCAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTCTGACGTGGGAAATATaGAAAGCAAAGATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLLTWEI*KAKMAV
Trigger: GACAGCCATCTTTGCTTTCAATATTTCCCACGTCAG...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp ATTGTCATCCATTTCACCACTGACAGGTGGCTCTGGGTTTCCTCGGCCCATGCCCACCTGTACCTTGCTTaGGTAATACAAAGAATAGTG +
Preference number: 5 (lower is better)
Translates to: IVIHFTTDRWLWVSSAHAHLYLA*VIQRIV
Trigger: CACTATTCTTTGTATTACCAAAGCAAGGTACAGGTG...GGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTGAAATGGATGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CAA 90 bp TTGCACTCGTTCAGATCTACACAGGAAGTCCCAGTTATATCTGGAGTGTACCCACACATTCCCGTACGTTaGCTGGAAGGATGGCATGTC +
Preference number: 5 (lower is better)
Translates to: LHSFRSTQEVPVISGVYPHIPVR*LEGWHV
Trigger: GACATGCCATCCTTCCAGCAAACGTACGGGAATGTG...TGGGTACACTCCAGATATAACTGGGACTTCCTGTGTAGATCTGAACGAGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CAA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCTGCCCCCAGGAGGTCTaGCCAAGGAGTCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFCPQEV*PRSLPQ
Trigger: CTGTGGAAGACTCCTTGGCAAGACCTCCTGGGGGCA...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS TCA 90 bp CATGCTTACAGACAGAGGGGCAGAGAAACATACGGAAGTGGATCCTaGTCACCAAGGGCTTCAAAGGCAGCCAAGAAATTCCAAACAAGT +
Preference number: 5 (lower is better)
Translates to: HAYRQRGRETYGSGS*SPRASKAAKKFQTS
Trigger: ACTTGTTTGGAATTTCTTGGCTGCCTTTGAAGCCCTTGGTGATCAGGATCCACTTCCGTATGTTTCTCTGCCCCTCTGTCTGTAAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682170.1
CDS GCA 90 bp TTACTGTCTTTAAGGCCTACAGTCTTACTTACATCATGGCCAGTCTaGACCCTGCATGGCCCAGAGAGAAATGCAGATGACAGACATACC +
Preference number: 5 (lower is better)
Translates to: LLSLRPTVLLTSWPV*TLHGPERNADDRHT
Trigger: GGTATGTCTGTCATCTGCATTTCTCTCTGGGCCATGCAGGGTGCAGACTGGCCATGATGTAAGTAAGACTGTAGGCCTTAAAGACAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560820.1
CDS-3UTR CAA 90 bp CATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCTGGAGGACAGATCGTGATCCACAGACATaGGGTCCTTTAAGCGCGTCG +
Preference number: 5 (lower is better)
Translates to: HIHAIISPIHLHVVWRTDRDPQT*GPLSAS
Trigger: CGACGCGCTTAAAGGACCCAATGTCTGTGGATCACG...ATCTGTCCTCCAGACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACACACACCTTCCTCCATaGAGACAGCCACTTTCACAA +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYTHLPP*RQPLSQ
Trigger: TTGTGAAAGTGGCTGTCTCAATGGAGGAAGGTGTGT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTTCCTGCAGATGGTTTTTGTaGGATCCAAAGTACTTTCAG +
Preference number: 5 (lower is better)
Translates to: TCCDEGCTGDPLATEAVSCRWFL*DPKYFQ
Trigger: CTGAAAGTACTTTGGATCCAACAAAAACCATCTGCA...GGAAACAGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCAGCAGCACATCTTCTaGGTCATGTTGAATAACAAT +
Preference number: 5 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFQQHIF*VMLNNN
Trigger: ATTGTTATTCAACATGACCAAGAAGATGTGCTGCTG...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp AGGGAGCACTCATCAATATCTTCACAGGCTTTCCCGTCAGCACTGGGCACGAAGCAGCAGCACATCTTCTaGGTCATGTTGAATAACAAT +
Preference number: 5 (lower is better)
Translates to: REHSSISSQAFPSALGTKQQHIF*VMLNNN
Trigger: ATTGTTATTCAACATGACCAAGAAGATGTGCTGCTG...CTTCGTGCCCAGTGCTGACGGGAAAGCCTGTGAAGATATTGATGAGTGCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp GCATGTGCCCAGGGCACAAATTTCTGGCTCTTCGACACACTCATCAATATCTTCCAAACTCATCTGTACTaGGGATGGGACACTGTTCAC +
Preference number: 5 (lower is better)
Translates to: ACAQGTNFWLFDTLINIFQTHLY*GWDTVH
Trigger: GTGAACAGTGTCCCATCCCAAGTACAGATGAGTTTG...GAAGATATTGATGAGTGTGTCGAAGAGCCAGAAATTTGTGCCCTGGGCACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp CCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTAAGCTGCCAACCATGTaGATACACACTCCATTTTCA +
Preference number: 5 (lower is better)
Translates to: PPRPLCTCGPVTEISLPLKLPTM*IHTPFS
Trigger: TGAAAATGGAGTGTGTATCAACATGGTTGGCAGCTT...AAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CGTTCTGACACTCGTCAATATCTTCACAAACCAACAACTTGTCATTATAGAAGATTGATGCATTCGGCGTaGCGCTGGCACACTGGGCCG +
Preference number: 5 (lower is better)
Translates to: RSDTRQYLHKPTTCHYRRLMHSA*RWHTGP
Trigger: CGGCCCAGTGTGCCAGCGCAACGCCGAATGCATCAA...TCTTCTATAATGACAAGTTGTTGGTTTGTGAAGATATTGACGAGTGTCAGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp TGCAAGACTCACATTGGCTTCTGTCTCAGACTGATCCTCGATATTGGAGGCATCCATTCATTACGATCATaGCACTGTCCTGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: CKTHIGFCLRLILDIGGIHSLRS*HCPVEV
Trigger: CACCTCCACAGGACAGTGCAATGATCGTAATGAATG...GATGCCTCCAATATCGAGGATCAGTCTGAGACAGAAGCCAATGTGAGTCTTGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTGCTCATTCGCAAATCTaGGCACCTTCTTCCACTGGA +
Preference number: 5 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPAHSQI*APSSTG
Trigger: TCCAGTGGAAGAAGGTGCCAAGATTTGCGAATGAGC...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACCACTCATCAAGATCTTaGCAGCTCCTTCCATCCTCT +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYHSSRS*QLLPSS
Trigger: AGAGGATGGAAGGAGCTGCAAAGATCTTGATGAGTG...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCATAGGAACTGGCAGTaGTGTTGCTTGGTTGCACAC +
Preference number: 5 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPHRNWQ*CCLVAH
Trigger: GTGTGCAACCAAGCAACACAACTGCCAGTTCCTATG...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGATCAGAGGTGCATTCATaGTTATCAATGCAGGACGTA +
Preference number: 5 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGSEVHS*LSMQDV
Trigger: TACGTCCTGCATTGATAACAATGAATGCACCTCTGA...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp TGTCTCAGACTGATCCTCGATATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTAGACCCGCACAGATaGATGTCAGAGGTGCATTCA +
Preference number: 5 (lower is better)
Translates to: CLRLILDIGGISFVCASPLDPHR*MSEVHS
Trigger: TGAATGCACCTCTGACATCAATCTGTGCGGGTCTAA...CGGAGAAGCACAAACGAAACTGATGCCTCCAATATCGAGGATCAGTCTGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTTCTAGGATTCGAACCTaGTTACTGACGTGGGAAATA +
Preference number: 5 (lower is better)
Translates to: YCTCCDEGCTGDPLATEASRIRT*LLTWEI
Trigger: TATTTCCCACGTCAGTAACAAGGTTCGAATCCTAGA...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp ATCAGGTCTCCGCTGATACCCGGGTCCACAGATGCACATATATGTGCCAATGAGTCTAGGATTCGAACCTaGTTACTGACGTGGGAAATA +
Preference number: 5 (lower is better)
Translates to: IRSPLIPGSTDAHICANESRIRT*LLTWEI
Trigger: TATTTCCCACGTCAGTAACAAGGTTCGAATCCTAGA...CTCATTGGCACATATATGTGCATCTGTGGACCCGGGTATCAGCGGAGACCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CAA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGGCTCAAGCCTGTAATTaGGAGAGGCAGAGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKEAQACN*ERQRWV
Trigger: CACCCACCTCTGCCTCTCCAAATTACAGGCTTGAGC...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS TCA 90 bp ATATTGCAGTGTTGTATGGATCTGGAGCCACAGGAAGGAGCTATCTaGCCAGATGGGCAAGTGCACATATTTGGCCTCGAACAAAATCCA +
Preference number: 5 (lower is better)
Translates to: ILQCCMDLEPQEGAI*PDGQVHIFGLEQNP
Trigger: TGGATTTTGTTCGAGGCCAAATATGTGCACTTGCCCATCTGGTCAGATAGCTCCTTCCTGTGGCTCCAGATCCATACAACACTGCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000537463.6
CDS TCA 90 bp AGACAGATCCTTCCTGTGGCATCCAAAGTCATTCCACTGGGACACTaGCACTTGAATGACCCCCTAGTGTTAACACACAGGCCATTTTTA +
Preference number: 5 (lower is better)
Translates to: RQILPVASKVIPLGH*HLNDPLVLTHRPFL
Trigger: TAAAAATGGCCTGTGTGTTAACACTAGGGGGTCATTCAAGTGTCAGTGTCCCAGTGGAATGACTTTGGATGCCACAGGAAGGATCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS GCA 90 bp GTGGCTCCATTGATGTTGATCTCACATCGCCCATCAATGACAGTCTaGCAGCAAGTGCCCTTGATGGTTTCTATGCAGATGGTTTTTGTT +
Preference number: 5 (lower is better)
Translates to: VAPLMLISHRPSMTV*QQVPLMVSMQMVFV
Trigger: AACAAAAACCATCTGCATAGAAACCATCAAGGGCACTTGCTGGCAGACTGTCATTGATGGGCGATGTGAGATCAACATCAATGGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CCA 90 bp GCTTATATATTACAGGCAACCGCTTTTGCTGTGATTGCCTCCAAATaGCTACAGGATGATGGTGGGTATCTTAGTGTGCAGTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: AYILQATAFAVIASK*LQDDGGYLSVQCSF
Trigger: GAAGGAGCACTGCACACTAAGATACCCACCATCATCCTGTAGCCATTTGGAGGCAATCACAGCAAAAGCGGTTGCCTGTAATATATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS-3UTR CAA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATCCACCGCCTCTTCTCTaGGCCCGACTGGCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYPPPLL*ARLALV
Trigger: AACCAGAGCCAGTCGGGCCAAGAGAAGAGGCGGTGG...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CGTACGTTTGCTGGAAGGATGGCATGTCAGCATAAATGGCCAACCCCCAATGGATTCATACAGCGAATATaGCAGTGTTGTATGGATCTG +
Preference number: 5 (lower is better)
Translates to: RTFAGRMACQHKWPTPNGFIQRI*QCCMDL
Trigger: CAGATCCATACAACACTGCAATATTCGCTGTATGAA...TCCATTGGGGGTTGGCCATTTATGCTGACATGCCATCCTTCCAGCAAACGTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTAGGAGTATTTCTACATaGTCCATTGTCACAAAGGAG +
Preference number: 5 (lower is better)
Translates to: YCTCCDEGCTGDPLATEARSIST*SIVTKE
Trigger: CTCCTTTGTGACAATGGACAATGTAGAAATACTCCT...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TGTAGGACCCATCCAAGTTTTGACAGGTACCTGGTGCACATTTTCTGGGTTCTAGTACATACAGCATGTTaGCCACAGTTGTGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: CRTHPSFDRYLVHIFWVLVHTAC*PQLCAP
Trigger: TGGAGCACACAACTGTGGCAAACATGCTGTATGTAC...TAGAACCCAGAAAATGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp AAAGAATTTTGTACTCGGATGTGTTCACAGCAGGACACATCTCACAAGGAGTACAACAGGCCAGGGAGGTaGTGGCAAGTTCCAAAGACA +
Preference number: 5 (lower is better)
Translates to: KEFCTRMCSQQDTSHKEYNRPGR*WQVPKT
Trigger: TGTCTTTGGAACTTGCCACAACCTCCCTGGCCTGTT...GTACTCCTTGTGAGATGTGTCCTGCTGTGAACACATCCGAGTACAAAATTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp TATTGGAGGCATCAGTTTCGTTTGTGCTTCTCCGTTTCCTGCCCCGTTTGGGGTCAGCAGCACATCTTCTaGGTCATGTTGAATAACAAT +
Preference number: 5 (lower is better)
Translates to: YWRHQFRLCFSVSCPVWGQQHIF*VMLNNN
Trigger: ATTGTTATTCAACATGACCAAGAAGATGTGCTGCTG...ACCCCAAACGGGGCAGGAAACGGAGAAGCACAAACGAAACTGATGCCTCCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCAAACTCATCTGTACTaGGGATGGGACACTGTTCAC +
Preference number: 5 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPQTHLY*GWDTVH
Trigger: GTGAACAGTGTCCCATCCCAAGTACAGATGAGTTTG...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp TGTTTCCTGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTGTCCAAGCACATGGTTaGGTCATCATTTGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: CFLVLPDLYARVGQSPKFVQAHG*VIICFK
Trigger: TTTAAAACAAATGATGACCAAACCATGTGCTTGGAC...AAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCAGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp TGGTCCTCCCAGACCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCCACTGTATTAATGCATaGGCCATTTCTGCAAAGATT +
Preference number: 5 (lower is better)
Translates to: WSSQTSMHVWASHRNFITHCINA*AISAKI
Trigger: AATCTTTGCAGAAATGGCCAATGCATTAATACAGTG...GGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGGTCTGGGAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGTCTAGAAGACATTCATaGATATCCACACAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLSRRHS*ISTQVL
Trigger: GAGGACCTGTGTGGATATCAATGAATGTCTTCTAGA...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACTCTGGACACAGACATTaGAAGCTGCCTTCAGTGTTA +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYSGHRH*KLPSVL
Trigger: TAACACTGAAGGCAGCTTCAAATGTCTGTGTCCAGA...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAGCTCCTTCCATCCCAGACATCGGGTTCTTaGCATTCGTCCATATCAACT +
Preference number: 5 (lower is better)
Translates to: QLCCLVAHSSRSLQLLPSQTSGS*HSSIST
Trigger: AGTTGATATGGACGAATGCAAAGAACCCGATGTCTG...GGATGGAAGGAGCTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp CATTCATTGTTATCAATGCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATGAACTGGCAGTTGTGTaGCTTGGTTGCACACTCATC +
Preference number: 5 (lower is better)
Translates to: HSLLSMQDVWCWVNPGGHELAVV*LGCTLI
Trigger: GATGAGTGTGCAACCAAGCAACACAACTGCCAGTTC...ATGTCCTCCCGGATTTACCCAACACCATACGTCCTGCATTGATAACAATGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp TCTTTGCACATCCTACGGTCTTCTCTGAGCACATATCCCACGGGACATTTGCATTCACATTCATTGATGTaGTGGCACAGCAGAGCGTTT +
Preference number: 5 (lower is better)
Translates to: SLHILRSSLSTYPTGHLHSHSLM*WHSRAF
Trigger: AAACGCTCTGCTGTGCCACAACATCAATGAATGTGA...ATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCGTAGGATGTGCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp CCATTTAACCACGTCCTCTCCTTTGGGGCAGAAATCTCTGGGAGTAGGGGCAAGCTAAATGAGGTCCTCTaGAGAACATATGAAAATCAG +
Preference number: 5 (lower is better)
Translates to: PFNHVLSFGAEISGSRGKLNEVL*RTYENQ
Trigger: CTGATTTTCATATGTTCTCAAGAGGACCTCATTTAG...CTTGCCCCTACTCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGTTAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp CAGATCTTCAGCCACAGAATTAAATCCCCACGTCCTTTATATACAGGAGCAATCCTTGAGGCCAAGAGTTaGAGACCATCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: QIFSHRIKSPRPLYTGAILEAKS*RPSWPT
Trigger: TGTTGGCCAGGATGGTCTCAAACTCTTGGCCTCAAG...GATTGCTCCTGTATATAAAGGACGTGGGGATTTAATTCTGTGGCTGAAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp CACCAACTCCAATTTCATTGCTGCAGGCTGTATCTCCATTGTCTCCTCGAGGTCTTCATACAGCGAATATaGCAGTGTTGTATGGATCTG +
Preference number: 5 (lower is better)
Translates to: HQLQFHCCRLYLHCLLEVFIQRI*QCCMDL
Trigger: CAGATCCATACAACACTGCAATATTCGCTGTATGAA...GACCTCGAGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp TGTAACATGTCCCTGGACCACAGATTCCAGGAGTCTCACATTCATTCACATCATCCCTGGCACATCTGGTaGCTGATCACAGTAAAACAT +
Preference number: 5 (lower is better)
Translates to: CNMSLDHRFQESHIHSHHPWHIW*LITVKH
Trigger: ATGTTTTACTGTGATCAGCAACCAGATGTGCCAGGG...ATGATGTGAATGAATGTGAGACTCCTGGAATCTGTGGTCCAGGGACATGTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTTTCACGCAACGGCCATaGGGGCACAGGTGTGCACTC +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCFTQRP*GHRCAL
Trigger: GAGTGCACACCTGTGCCCCAATGGCCGTTGCGTGAA...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp AACCTTCCCCTCCAGGACAAAGAATTTTGTACTCGGATGTGTTCACAGCAGGACAAGCTTCCTGCTGTATaGGTACATACAGCATGTTTG +
Preference number: 5 (lower is better)
Translates to: NLPLQDKEFCTRMCSQQDKLPAV*VHTACL
Trigger: CAAACATGCTGTATGTACCAATACAGCAGGAAGCTT...GTCCTGCTGTGAACACATCCGAGTACAAAATTCTTTGTCCTGGAGGGGAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp TGTAACATGTCCCTGGACCACAGATTCCAGGAGTCTCACATTCATTCACATCATGGACTGCAGCTACATTaGAAGCTTCCTGCTGTATTG +
Preference number: 5 (lower is better)
Translates to: CNMSLDHRFQESHIHSHHGLQLH*KLPAVL
Trigger: CAATACAGCAGGAAGCTTCAAATGTAGCTGCAGTCC...ATGATGTGAATGAATGTGAGACTCCTGGAATCTGTGGTCCAGGGACATGTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp CAGTTGTGTTGCTTGGTTGCACACTCATCAAGATCTTTGCAGCTCCTTCCATCCAAACTCCCAAAGGTGTaGATACATTTTCCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: QLCCLVAHSSRSLQLLPSKLPKV*IHFPPW
Trigger: CCAAGGAGGAAAATGTATCAACACCTTTGGGAGTTT...GGATGGAAGGAGCTGCAAAGATCTTGATGAGTGTGCAACCAAGCAACACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559133.5
CDS-3UTR CAA 90 bp TATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTCTGGCCACTGAGGCTGTTCTTGCATTCCATTaGTTTTTCAGTACAGTCATG +
Preference number: 5 (lower is better)
Translates to: YCTCCDEGCTGDPLATEAVLAFH*FFSTVM
Trigger: CATGACTGTACTGAAAAACAAATGGAATGCAAGAAC...AGCCTCAGTGGCCAGAGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACTCTAGGATTCGAACCTaGTTACTGACGTGGGAAATA +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYSRIRT*LLTWEI
Trigger: TATTTCCCACGTCAGTAACAAGGTTCGAATCCTAGA...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACGCTCTTCAAAGATTTTaGAGAGCACTTTCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYALQRF*RALSCV
Trigger: GACACAGGAAAGTGCTCTCAAAAATCTTTGAAGAGC...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ACCGGTATAAATGTCGATGACAAAGCCTGGCCTTTGACTTCCACAGAGTGTAGCCCAATTTCACATTCATaGATGTTGTGGCACAGCAGA +
Preference number: 5 (lower is better)
Translates to: TGINVDDKAWPLTSTECSPISHS*MLWHSR
Trigger: TCTGCTGTGCCACAACATCAATGAATGTGAAATTGG...GCTACACTCTGTGGAAGTCAAAGGCCAGGCTTTGTCATCGACATTTATACCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp AATAAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCACCACGTCCTCTCCTTaGGGGCAGAAATCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: NKHLLSDQGQVYHDKQTSTTSSP*GQKSLG
Trigger: TCCCAGAGATTTCTGCCCCAAAGGAGAGGACGTGGT...GGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCACAACCAGAATTGATATaGCAGGGAAAGGAACGGGCT +
Preference number: 5 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPQPELI*QGKERA
Trigger: AGCCCGTTCCTTTCCCTGCAATATCAATTCTGGTTG...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp GTAAGTGAAATGAACAGCCACATATCCAAGTGGATACCATCACTTGGTGACCCAGCCTCAGTCTACTTATaGAACTTGCCATGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: VSEMNSHISKWIPSLGDPASVYL*NLPCAL
Trigger: CAAGGCACATGGCAAGTTCAATAAGTAGACTGAGGC...TGGGTCACCAAGTGATGGTATCCACTTGGATATGTGGCTGTTCATTTCACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp CAGATCTTCAGCCACAGAATTAAATCCCCACGTCCTTTATATACAGGAGCAATCACAAGAAGGCAGTATTaGCTGGGGAGAAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: QIFSHRIKSPRPLYTGAITRRQY*LGRRNQ
Trigger: CTGGTTCCTTCTCCCCAGCAAATACTGCCTTCTTGT...GATTGCTCCTGTATATAAAGGACGTGGGGATTTAATTCTGTGGCTGAAGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp CGTTCTGACACTCGTCAATATCTTCACAAACCAACAACTTGTCATTATAGAAGATGCATGCACATCGATTaGGGGCCACACACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RSDTRQYLHKPTTCHYRRCMHID*GPHTFL
Trigger: GAGGAAGGTGTGTGGCCCCAAATCGATGTGCATGCA...TCTTCTATAATGACAAGTTGTTGGTTTGTGAAGATATTGACGAGTGTCAGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp GACCCCTTGTTGACAGGAATGACCGAGGGTAATCTTGGCATATTGCACATGCTGAGCTGGAATCCAGGTTaGCAAATACATTTAAAACTG +
Preference number: 5 (lower is better)
Translates to: DPLLTGMTEGNLGILHMLSWNPG*QIHLKL
Trigger: CAGTTTTAAATGTATTTGCAAACCTGGATTCCAGCT...CAGCATGTGCAATATGCCAAGATTACCCTCGGTCATTCCTGTCAACAAGGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACCCAATTTCACATTCATaGATGTCTGTACAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYPISHS*MSVQPV
Trigger: AACTGGCTGTACAGACATCAATGAATGTGAAATTGG...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAATTGAGGCACTGGCCATaGCCACAGAGATTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKLRHWP*PQRFRF
Trigger: GAACCTGAATCTCTGTGGCAATGGCCAGTGCCTCAA...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp GAGGTCGAATATCCAAATAGCAATTTCCAGAGCGGGTATCAACACAGCCAACTCCCAGGACAAAGAATTTaGTACTCGGATGTGTTCACA +
Preference number: 5 (lower is better)
Translates to: EVEYPNSNFQSGYQHSQLPGQRI*YSDVFT
Trigger: TGTGAACACATCCGAGTACAAAATTCTTTGTCCTGG...GAGTTGGCTGTGTTGATACCCGCTCTGGAAATTGCTATTTGGATATTCGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp CATCAGTATCTACACATTCATTCCCTGCTAGAATATAACCAAAGGGACACTCGCCATTCATTACGATCATaGCACTGTCCTGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: HQYLHIHSLLEYNQRDTRHSLRS*HCPVEV
Trigger: CACCTCCACAGGACAGTGCAATGATCGTAATGAATG...GCGAGTGTCCCTTTGGTTATATTCTAGCAGGGAATGAATGTGTAGATACTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp AGAAAGGATGAAACCATGATTGCAGCGGCAGTTGAAGGAACCAATTGTGTTCCGTCTAGAAGACATTCATaGATATCCACACAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: RKDETMIAAAVEGTNCVPSRRHS*ISTQVL
Trigger: GAGGACCTGTGTGGATATCAATGAATGTCTTCTAGA...CGGAACACAATTGGTTCCTTCAACTGCCGCTGCAATCATGGTTTCATCCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp TGTAACATGTCCCTGGACCACAGATTCCAGGAGTCTCACATTCATTCACATCATCAGACATCGGGTTCTTaGCATTCGTCCATATCAACT +
Preference number: 5 (lower is better)
Translates to: CNMSLDHRFQESHIHSHHQTSGS*HSSIST
Trigger: AGTTGATATGGACGAATGCAAAGAACCCGATGTCTG...ATGATGTGAATGAATGTGAGACTCCTGGAATCTGTGGTCCAGGGACATGTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp CATTCATTGTTATCAATGCAGGACGTATGGTGTTGGGTAAATCCGGGAGGACATTTTTTGCAGATAAAATaGCAGGGTTTGGGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: HSLLSMQDVWCWVNPGGHFLQIK*QGLGAW
Trigger: CCAGGCTCCCAAACCCTGCAATTTTATCTGCAAAAA...ATGTCCTCCCGGATTTACCCAACACCATACGTCCTGCATTGATAACAATGAATG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000559133.5
ENST00000674301.1
CDS-3UTR CAA 90 bp AGGGTAATCTTGGCATATTGCACATGCTGTGATGAAGGATGCACTGGTGATCCTTCAGAGGTGCATTCATaGTTATCAATGCAGGACGTA +
Preference number: 5 (lower is better)
Translates to: RVILAYCTCCDEGCTGDPSEVHS*LSMQDV
Trigger: TACGTCCTGCATTGATAACAATGAATGCACCTCTGA...AGGATCACCAGTGCATCCTTCATCACAGCATGTGCAATATGCCAAGATTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCCCGTTGTTCTGGATCTaGAAACTTGGGAGACCCACA +
Preference number: 5 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFPLFWI*KLGRPT
Trigger: TGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACGG...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp CACTTGGTGACCCAGAGCTATATAATAAAGCTACAGAACCACTCAGGAAAAGAGAGTTCTCAGAACCACTaGCCCTGTTCTGCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: HLVTQSYIIKLQNHSGKESSQNH*PCSASN
Trigger: ATTGGAAGCAGAACAGGGCAAGTGGTTCTGAGAACT...CTCTTTTCCTGAGTGGTTCTGTAGCTTTATTATATAGCTCTGGGTCACCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp CACTTCATAAACTGTGCATCTCCAATCAGAATGGTAAACAGGTTTCACTGTAGTACTGTGGAACAACTTTaGCTGCCCAGTGGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: HFINCASPIRMVNRFHCSTVEQL*LPSGER
Trigger: TCTCTCCCCACTGGGCAGCAAAAGTTGTTCCACAGT...ACTACAGTGAAACCTGTTTACCATTCTGATTGGAGATGCACAGTTTATGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS TCA 90 bp GACACTTTTCAGATGCTTATATATTACAGGCAACCGCTTTTGCTGTaGTTGCCTCCAAATGGCTACAGGATGATGGTGGGTATCTTAGTG +
Preference number: 5 (lower is better)
Translates to: DTFQMLIYYRQPLLL*LPPNGYRMMVGILV
Trigger: CACTAAGATACCCACCATCATCCTGTAGCCATTTGGAGGCAATCACAGCAAAAGCGGTTGCCTGTAATATATAAGCATCTGAAAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS TCA 90 bp CAGCAGAGAAAGATGCGGGCATGGATGTGGCTTCTTGCTATGTTGTaGGTAAACATGGAAGATGAAACATGGAAGATGAAGTCAAATGCA +
Preference number: 5 (lower is better)
Translates to: QQRKMRAWMWLLAML*VNMEDETWKMKSNA
Trigger: TGCATTTGACTTCATCTTCCATGTTTCATCTTCCATGTTTACTCACAACATAGCAAGAAGCCACATCCATGCCCGCATCTTTCTCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS-3UTR CAA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATCGTGATCCACAGACATaGGGTCCTTTAAGCGCGTCG +
Preference number: 5 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYRDPQT*GPLSAS
Trigger: CGACGCGCTTAAAGGACCCAATGTCTGTGGATCACG...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCTGGAGGACAGATACTTTCACAAACAGGTaGTCCACAGTGAGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: HIHAIISPIHLHVVWRTDTFTNR*STVSPY
Trigger: ATAGGGACTCACTGTGGACAACCTGTTTGTGAAAGT...ATCTGTCCTCCAGACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTGACAATCCCGCTGAGTaGTCCCTGGCACATCTGGTT +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCDNPAE*SLAHLV
Trigger: AACCAGATGTGCCAGGGACAACTCAGCGGGATTGTC...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAATGCAGCGTCCATTATaGCAGATCCGGCCATTCTGT +
Preference number: 5 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKMQRPL*QIRPFC
Trigger: ACAGAATGGCCGGATCTGCAATAATGGACGCTGCAT...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CCTCTATGCACGTGTGGGCCAGTCACCGAAATTTCATTACCACTTGGTGTATACATCATCTTGCACTCATaGATATCTTTGAAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: PLCTCGPVTEISLPLGVYIILHS*ISLKKG
Trigger: GCCTTTCTTCAAAGATATCAATGAGTGCAAGATGAT...GTATACACCAAGTGGTAATGAAATTTCGGTGACTGGCCCACACGTGCATAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CGTTCTGACACTCGTCAATATCTTCACAAACCAACAACTTGTCATTATAGAAGATTGAGGCACTGGCCATaGCCACAGAGATTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: RSDTRQYLHKPTTCHYRRLRHWP*PQRFRF
Trigger: GAACCTGAATCTCTGTGGCAATGGCCAGTGCCTCAA...TCTTCTATAATGACAAGTTGTTGGTTTGTGAAGATATTGACGAGTGTCAGAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTGAGTCATCCTGCCCGTaGTTCTGGATCTTGAAACTT +
Preference number: 5 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRIESSCP*FWILKL
Trigger: AAGTTTCAAGATCCAGAACAACGGGCAGGATGACTC...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAAATGCAGCGTCCATTTaGACAGAGATAGCGGACCAA +
Preference number: 5 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKNAASI*TEIADQ
Trigger: TTGGTCCGCTATCTCTGTCAAAATGGACGCTGCATT...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ATCAAAGTGATCCACTGTGTGCCAACTCCATTTTCCCCTGTTGTTTGTTATAAAGGACTGCAGCTACATTaGAAGCTTCCTGCTGTATTG +
Preference number: 5 (lower is better)
Translates to: IKVIHCVPTPFSPVVCYKGLQLH*KLPAVL
Trigger: CAATACAGCAGGAAGCTTCAAATGTAGCTGCAGTCC...TTTATAACAAACAACAGGGGAAAATGGAGTTGGCACACAGTGGATCACTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp AAAGAATTTTGTACTCGGATGTGTTCACAGCAGGACACATCTCACAAGGAGTACAAGCTGCCAACCATGTaGATACACACTCCATTTTCA +
Preference number: 5 (lower is better)
Translates to: KEFCTRMCSQQDTSHKEYKLPTM*IHTPFS
Trigger: TGAAAATGGAGTGTGTATCAACATGGTTGGCAGCTT...GTACTCCTTGTGAGATGTGTCCTGCTGTGAACACATCCGAGTACAAAATTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp TGTAGGACCCATCCAAGTTTTGACAGGTACCTGGTGCACATTTTCTGGGTTCTACACTGTATTAATGCATaGGCCATTTCTGCAAAGATT +
Preference number: 5 (lower is better)
Translates to: CRTHPSFDRYLVHIFWVLHCINA*AISAKI
Trigger: AATCTTTGCAGAAATGGCCAATGCATTAATACAGTG...TAGAACCCAGAAAATGTGCACCAGGTACCTGTCAAAACTTGGATGGGTCCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp GAAAGTGAAATTGAAAGGTCACAGACAATTGAAAGGTACAGGTTTAAATCTCAGAGAAACACAGTGCCCTaGGCCTATGCGGAAGTAACC +
Preference number: 5 (lower is better)
Translates to: ESEIERSQTIERYRFKSQRNTVP*AYAEVT
Trigger: GGTTACTTCCGCATAGGCCAAGGGCACTGTGTTTCT...CTGAGATTTAAACCTGTACCTTTCAATTGTCTGTGACCTTTCAATTTCACTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATCACATTCCCGTACGTTaGCTGGAAGGATGGCATGTC +
Preference number: 5 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYHIPVR*LEGWHV
Trigger: GACATGCCATCCTTCCAGCAAACGTACGGGAATGTG...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTGACATTGACCCCTTGTaGACAGGAATGACCGAGGGT +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCDIDPL*TGMTEG
Trigger: ACCCTCGGTCATTCCTGTCAACAAGGGGTCAATGTC...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTGTGTACGAACCCTGGTaGTTAATACACTCACCACCA +
Preference number: 5 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFVYEPW*LIHSPP
Trigger: TGGTGGTGAGTGTATTAACAACCAGGGTTCGTACAC...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTCACAGCCAACTCGAGTaGGGTTCAGTTCAAAATCAG +
Preference number: 5 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFHSQLE*GSVQNQ
Trigger: CTGATTTTGAACTGAACCCAACTCGAGTTGGCTGTG...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTCTTCACATGTCATCATaGGACCGGGCTCAAATCCCT +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCLHMSS*DRAQIP
Trigger: AGGGATTTGAGCCCGGTCCAATGATGACATGTGAAG...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTGTACATACAGCATGTTaGCCACAGTTGTGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCVHTAC*PQLCAP
Trigger: TGGAGCACACAACTGTGGCAAACATGCTGTATGTAC...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp CAAACTTCTTCTCATATCCATGCAATTATTTCCCCCATTCACTTGCATGTAGTCTTCACACTTCTCATTTaGAAGACTGTATCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: QTSSHIHAIISPIHLHVVFTLLI*KTVSRW
Trigger: CCACCTGGATACAGTCTTCAAAATGAGAAGTGTGAA...GACTACATGCAAGTGAATGGGGGAAATAATTGCATGGATATGAGAAGAAGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTTTAGACCCGCACAGATaGATGTCAGAGGTGCATTCA +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCLDPHR*MSEVHS
Trigger: TGAATGCACCTCTGACATCAATCTGTGCGGGTCTAA...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TTTAATACACCTCTATCACATGGTTCCATAGGTGCAGCGTTAGAAGGAAATTTTTCTCAACATCCCAACTaGCAAGACTCACATTGGCTT +
Preference number: 5 (lower is better)
Translates to: FNTPLSHGSIGAALEGNFSQHPN*QDSHWL
Trigger: AAGCCAATGTGAGTCTTGCAAGTTGGGATGTTGAGA...AAAATTTCCTTCTAACGCTGCACCTATGGAACCATGTGATAGAGGTGTATTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTAAACTGCCATCTGTGTaGATGCAGCGTCCATTATTG +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCKLPSV*MQRPLL
Trigger: CAATAATGGACGCTGCATCAACACAGATGGCAGTTT...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTCCAGGACAAAGAATTTaGTACTCGGATGTGTTCACA +
Preference number: 5 (lower is better)
Translates to: NKSLVLISTITNPHIKGIPGQRI*YSDVFT
Trigger: TGTGAACACATCCGAGTACAAAATTCTTTGTCCTGG...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp CGTTCTGACACTCGTCAATATCTTCACAAACCAACAACTTGTCATTATAGAAGAAAACTCCCAAAGGTGTaGATACATTTTCCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: RSDTRQYLHKPTTCHYRRKLPKV*IHFPPW
Trigger: CCAAGGAGGAAAATGTATCAACACCTTTGGGAGTTT...TCTTCTATAATGACAAGTTGTTGGTTTGTGAAGATATTGACGAGTGTCAGAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTAAGCTGCCAACCATGTaGATACACACTCCATTTTCA +
Preference number: 5 (lower is better)
Translates to: NKSLVLISTITNPHIKGIKLPTM*IHTPFS
Trigger: TGAAAATGGAGTGTGTATCAACATGGTTGGCAGCTT...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000559133.5
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTTCTGGACACAGACATTaGAAGCTGCCTTCAGTGTTA +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCSGHRH*KLPSVL
Trigger: TAACACTGAAGGCAGCTTCAAATGTCTGTGTCCAGA...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp GTCAGCATAGTAGTTTCTGTAGCACAAACTTCTTCTCATATCCATGCAATTATTTCTGGACACAGACATTaGAAGCTGCCTTCAGTGTTA +
Preference number: 5 (lower is better)
Translates to: VSIVVSVAQTSSHIHAIISGHRH*KLPSVL
Trigger: TAACACTGAAGGCAGCTTCAAATGTCTGTGTCCAGA...AATAATTGCATGGATATGAGAAGAAGTTTGTGCTACAGAAACTACTATGCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS-3UTR CAA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATCAGACATCGGGTTCTTaGCATTCGTCCATATCAACT +
Preference number: 5 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYQTSGS*HSSIST
Trigger: AGTTGATATGGACGAATGCAAAGAACCCGATGTCTG...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTTTTTTGCAGATAAAATaGCAGGGTTTGGGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCFLQIK*QGLGAW
Trigger: CCAGGCTCCCAAACCCTGCAATTTTATCTGCAAAAA...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ACATTATCGGAATTCTGGGTTTATTTTCCACGAAGGCCAAGATGGAACCGAATTGTATGCAGAAGAAAGTaGGTAATAGCAAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: TLSEFWVYFPRRPRWNRIVCRRK*VIAKDS
Trigger: TGAGTCTTTTGCTATTACCAACTTTCTTCTGCATAC...AATTCGGTTCCATCTTGGCCTTCGTGGAAAATAAACCCAGAATTCCGATAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp AAACATCTGCTGTCTGATCAAGGTCAGGTTTACCATGATAAGCAAACTTCCTTCGGAATATATATGCATTaGAAGAATACCAAGGCGGAT +
Preference number: 5 (lower is better)
Translates to: KHLLSDQGQVYHDKQTSFGIYMH*KNTKAD
Trigger: ATCCGCCTTGGTATTCTTCAAATGCATATATATTCC...GAAGGAAGTTTGCTTATCATGGTAAACCTGACCTTGATCAGACAGCAGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTAAGCTTCCTGCTGTATaGGTACATACAGCATGTTTG +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCKLPAV*VHTACL
Trigger: CAAACATGCTGTATGTACCAATACAGCAGGAAGCTT...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTAAACTCCCAAAGGTGTaGATACATTTTCCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCKLPKV*IHFPPW
Trigger: CCAAGGAGGAAAATGTATCAACACCTTTGGGAGTTT...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTTTCACACTTCTCATTTaGAAGACTGTATCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCFTLLI*KTVSRW
Trigger: CCACCTGGATACAGTCTTCAAAATGAGAAGTGTGAA...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATAGTTGTGTTGCTTGGTaGCACACTCATCAAGATCTT +
Preference number: 5 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYSCVAW*HTHQDL
Trigger: AAGATCTTGATGAGTGTGCAACCAAGCAACACAACT...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTTTTCTACATTGTCCATaGTCACAAAGGAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCFLHCP*SQRRLF
Trigger: GAACAGTCTCCTTTGTGACAATGGACAATGTAGAAA...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp TTACAAAATAATTATTGGCAAATGAAATGGGCTGAGGGGGTAGAGACAAGATATCACCTGTACCTTGCTTaGGTAATACAAAGAATAGTG +
Preference number: 5 (lower is better)
Translates to: LQNNYWQMKWAEGVETRYHLYLA*VIQRIV
Trigger: CACTATTCTTTGTATTACCAAAGCAAGGTACAGGTG...ATATCTTGTCTCTACCCCCTCAGCCCATTTCATTTGCCAATAATTATTTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp AACAAGTCTTTGGTCTTAATAAGCACCATTACAAACCCTCACATTAAGGGCATTCAAAAGTTACAGCAATaGGATACAGTCTGGGATTAT +
Preference number: 5 (lower is better)
Translates to: NKSLVLISTITNPHIKGIQKLQQ*DTVWDY
Trigger: ATAATCCCAGACTGTATCCAATTGCTGTAACTTTTG...AATGCCCTTAATGTGAGGGTTTGTAATGGTGCTTATTAAGACCAAAGACTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS-3UTR CAA 90 bp ATTAAGAAACCAAAAGTTACAGCAATTGGATACAGTCTGGGATTATCCCTTTGTTTTCATATCGACGGATaGAGCCTAACAGCTAAATAC +
Preference number: 5 (lower is better)
Translates to: IKKPKVTAIGYSLGLSLCFHIDG*SLTAKY
Trigger: GTATTTAGCTGTTAGGCTCAATCCGTCGATATGAAA...ACAAAGGGATAATCCCAGACTGTATCCAATTGCTGTAACTTTTGGTTTCTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS GCA 72 bp GCGGCGGCTGCTCCCAGTCGTGGCCGCTACAGCCACTaGTCGGCTCCGCTCGCAGCTGTCCCAGCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: AAAAPSRGRYSH*SAPLAAVPAVA
Trigger: AGCCACAGCTGGGACAGCTGCGAGCGGAGCCGAGCAGTGGCTGTAGCGGCCACGACTGGGAGCAGCCGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316623.10
ENST00000537463.6
ENST00000560355.1
CDS CAA 90 bp GGAGGCTCCAATAGCTGGGTCCCCCGGGACACCAGGGAGCTGATTTaGATGCCAGTGGAGGTCTTACCTGTGCAGTTCCCGCCGCTTCTG +
Preference number: 6 (lower is better)
Translates to: GGSNSWVPRDTRELI*MPVEVLPVQFPPLL
Trigger: CAGAAGCGGCGGGAACTGCACAGGTAAGACCTCCACTGGCATCAAAATCAGCTCCCTGGTGTCCCGGGGGACCCAGCTATTGGAGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683268.1
CDS GCA 72 bp ACCCTTTACCACATATGGGATCAACTTGGCATAGGGTaGACGGGCTTCCCCACGCAGCACCGAGGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: TLYHIWDQLGIG*TGFPTQHRGRS
Trigger: GCTCCTCCCTCGGTGCTGCGTGGGGAAGCCCGTGCACCCTATGCCAAGTTGATCCCATATGTGGTAAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CAA 72 bp AATAGCTGGGTCCCCCGGGACACCAGGGAGCTGATTTaGATGCCAGTGGAGGTCTTACCTGTGCAGTTCCCG +
Preference number: 6 (lower is better)
Translates to: NSWVPRDTRELI*MPVEVLPVQFP
Trigger: CGGGAACTGCACAGGTAAGACCTCCACTGGCATCAAAATCAGCTCCCTGGTGTCCCGGGGGACCCAGCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683268.1
CDS TCA 72 bp GAAGCGGCATGTGTGGCAGCAGCCAGAGATTTCTATTaGGGACATTGGATCTGGCCACTTGCTGCCGGCCAG +
Preference number: 6 (lower is better)
Translates to: EAACVAAARDFY*GHWIWPLAAGQ
Trigger: CTGGCCGGCAGCAAGTGGCCAGATCCAATGTCCTCAATAGAAATCTCTGGCTGCTGCCACACATGCCGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS GCA 72 bp CAGAGATTTCTATTGAGGACATTGGATCTGGCCACTTaGTGCCGGCCAGCTGGCCCTCAGCTAGGCTCTCAG +
Preference number: 6 (lower is better)
Translates to: QRFLLRTLDLAT*CRPAGPQLGSQ
Trigger: CTGAGAGCCTAGCTGAGGGCCAGCTGGCCGGCAGCAAGTGGCCAGATCCAATGTCCTCAATAGAAATCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS CCA 72 bp CCTTGGTGGCTCCCGAGATGGATACAGATATTCCACTaGTGGTCGAGGGACCGGAATTTGAGGTCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: PWWLPRWIQIFH*WSRDRNLRSRR
Trigger: CCTCCTGGACCTCAAATTCCGGTCCCTCGACCACCAGTGGAATATCTGTATCCATCTCGGGAGCCACCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS CCA 72 bp AACGTTTACTGGCAGCACCCTTGGTGGCTCCCGAGATaGATACAGATATTCCACTGGTGGTCGAGGGACCGG +
Preference number: 6 (lower is better)
Translates to: NVYWQHPWWLPR*IQIFHWWSRDR
Trigger: CCGGTCCCTCGACCACCAGTGGAATATCTGTATCCATCTCGGGAGCCACCAAGGGTGCTGCCAGTAAACGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS CCA 72 bp GTGCGGTGCCAACTGTACTCACCAAGGCACTCGTCCTaGTTGGGGCTGGCGGTAAACCCATCATTACACTCA +
Preference number: 6 (lower is better)
Translates to: VRCQLYSPRHSS*LGLAVNPSLHS
Trigger: TGAGTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAGTGCCTTGGTGAGTACAGTTGGCACCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682170.1
CDS CAA 72 bp CGGTGCCAACTGTACTCACCAAGGCACTCGTCCTGGTaGGGGCTGGCGGTAAACCCATCATTACACTCACAG +
Preference number: 6 (lower is better)
Translates to: RCQLYSPRHSSW*GLAVNPSLHSQ
Trigger: CTGTGAGTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAGTGCCTTGGTGAGTACAGTTGGCACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682170.1
CDS CAA 90 bp CCGAGGGAGGAGCAGCACTGGGACTTTAAGGTGGCTCCATTGATGTaGATCTCACATCGCCCATCAATGACAGTCTGCCAGCAAGTGCCC +
Preference number: 6 (lower is better)
Translates to: PREEQHWDFKVAPLM*ISHRPSMTVCQQVP
Trigger: GGGCACTTGCTGGCAGACTGTCATTGATGGGCGATGTGAGATCAACATCAATGGAGCCACCTTAAAGTCCCAGTGCTGCTCCTCCCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS TCA 72 bp AGTCTGCACCCTGCATGGCCCAGAGAGAAATGCAGATaGCAGACATACCATCAGGTTCCGTGGGGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: SLHPAWPREKCR*QTYHQVPWGRA
Trigger: AGCTCTGCCCCACGGAACCTGATGGTATGTCTGTCATCTGCATTTCTCTCTGGGCCATGCAGGGTGCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560820.1
CDS GCA 72 bp AGGTGGCTGGGTGGGGAGAGCAACAGCAGAGAAAGATaGGGGCATGGATGTGGCTTCTTGCTATGTTGTGAG +
Preference number: 6 (lower is better)
Translates to: RWLGGESNSRER*GHGCGFLLCCE
Trigger: CTCACAACATAGCAAGAAGCCACATCCATGCCCGCATCTTTCTCTGCTGTTGCTCTCCCCACCCAGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS GCA 72 bp AGATTTCTATTGAGGACATTGGATCTGGCCACTTGCTaGCGGCCAGCTGGCCCTCAGCTAGGCTCTCAGGAA +
Preference number: 6 (lower is better)
Translates to: RFLLRTLDLATC*RPAGPQLGSQE
Trigger: TTCCTGAGAGCCTAGCTGAGGGCCAGCTGGCCGGCAGCAAGTGGCCAGATCCAATGTCCTCAATAGAAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS CCA 72 bp CCCAGGTACCTGTTCTGGGAGATGAATAATGCCTTCTaGTATGTCTGCTCCCATCACCGAATCGGCCCCCTC +
Preference number: 6 (lower is better)
Translates to: PRYLFWEMNNAF*YVCSHHRIGPL
Trigger: GAGGGGGCCGATTCGGTGATGGGAGCAGACATACCAGAAGGCATTATTCATCTCCCAGAACAGGTACCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS CCA 72 bp TCTGGTGACCACGAGCAGGGCAGGGGTAGGAAGGAGTaGGGTGGGTATTGCAACAACGAAGTACAAGGAGAA +
Preference number: 6 (lower is better)
Translates to: SGDHEQGRGRKE*GGYCNNEVQGE
Trigger: TTCTCCTTGTACTTCGTTGTTGCAATACCCACCCCACTCCTTCCTACCCCTGCCCTGCTCGTGGTCACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683268.1
CDS CAA 72 bp CAGTACCCTTCCCGATTGTCAAGGCACTCGTCCTGGTaGGGGCTGGCGGTAAACCCATCATTACACTCACAG +
Preference number: 6 (lower is better)
Translates to: QYPSRLSRHSSW*GLAVNPSLHSQ
Trigger: CTGTGAGTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAGTGCCTTGACAATCGGGAAGGGTACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS CAA 90 bp CCAGCTGGAACCCTTTGTTGCACTCACACCGGTAACTCCCAGGAGTaGGAATGCAGCGTCCATTTTGACAGAGATAGCGGACCAACTGGC +
Preference number: 6 (lower is better)
Translates to: PAGTLCCTHTGNSQE*ECSVHFDRDSGPTG
Trigger: GCCAGTTGGTCCGCTATCTCTGTCAAAATGGACGCTGCATTCCAACTCCTGGGAGTTACCGGTGTGAGTGCAACAAAGGGTTCCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CAA 90 bp GCAGCACCGAGGGAGGAGCAGCACTGGGACTTTAAGGTGGCTCCATaGATGTTGATCTCACATCGCCCATCAATGACAGTCTGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: AAPREEQHWDFKVAP*MLISHRPSMTVCQQ
Trigger: TTGCTGGCAGACTGTCATTGATGGGCGATGTGAGATCAACATCAATGGAGCCACCTTAAAGTCCCAGTGCTGCTCCTCCCTCGGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS GCA 72 bp TATCACTGCCTGCTGACGTCATTCCTGGCCCACTGCTaGAGAGTGCCTGATATTCCGCTGAATTCTGTGCAG +
Preference number: 6 (lower is better)
Translates to: YHCLLTSFLAHC*RVPDIPLNSVQ
Trigger: CTGCACAGAATTCAGCGGAATATCAGGCACTCTGCAGCAGTGGGCCAGGAATGACGTCAGCAGGCAGTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS GCA 72 bp TTTCAGGATATGCTGATCTGGCAAAGGCTGATATCCTaGCCCAAGTGTCTGCCCCACGTGTCTGCCCCACTT +
Preference number: 6 (lower is better)
Translates to: FQDMLIWQRLIS*PKCLPHVSAPL
Trigger: AAGTGGGGCAGACACGTGGGGCAGACACTTGGGGCAGGATATCAGCCTTTGCCAGATCAGCATATCCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS CCA 72 bp TGGTGGCTCCCGAGATGGATACAGATATTCCACTGGTaGTCGAGGGACCGGAATTTGAGGTCCAGGAGGAAA +
Preference number: 6 (lower is better)
Translates to: WWLPRWIQIFHW*SRDRNLRSRRK
Trigger: TTTCCTCCTGGACCTCAAATTCCGGTCCCTCGACCACCAGTGGAATATCTGTATCCATCTCGGGAGCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS CCA 72 bp AAGCAGTACCCTTCCCGATTGTCAAGGCACTCGTCCTaGTTGGGGCTGGCGGTAAACCCATCATTACACTCA +
Preference number: 6 (lower is better)
Translates to: KQYPSRLSRHSS*LGLAVNPSLHS
Trigger: TGAGTGTAATGATGGGTTTACCGCCAGCCCCAACCAGGACGAGTGCCTTGACAATCGGGAAGGGTACTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS CAA 90 bp AGGAGTCTTCCACAGGGAGAGTCATCCTGCCCGTTGTTCTGGATCTaGAAACTTGGGAGACCCACACCAAAGGAGGGAACCGGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: RSLPQGESSCPLFWI*KLGRPTPKEGTGSF
Trigger: AAAGGAACCGGTTCCCTCCTTTGGTGTGGGTCTCCCAAGTTTCAAGATCCAGAACAACGGGCAGGATGACTCTCCCTGTGGAAGACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560355.1
CDS TCA 72 bp GTAAACACTCATCAATGTCTCGGCATTCTGTCCGCGTaGGTGTGCTCTGATATCCAGCTCGGCACTGACAGG +
Preference number: 6 (lower is better)
Translates to: VNTHQCLGILSA*VCSDIQLGTDR
Trigger: CCTGTCAGTGCCGAGCTGGATATCAGAGCACACTCACGCGGACAGAATGCCGAGACATTGATGAGTGTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS GCA 72 bp TATGAGGTTCACGCAACGGCCATTGGGGCACAGGTGTaGACTCAGCTCACATTCATTGATGTCGATACACGC +
Preference number: 6 (lower is better)
Translates to: YEVHATAIGAQV*TQLTFIDVDTR
Trigger: GCGTGTATCGACATCAATGAATGTGAGCTGAGTGCACACCTGTGCCCCAATGGCCGTTGCGTGAACCTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CCA 72 bp GCTTTCCCTGTCAGCCTATTTCAGGATATGCTGATCTaGCAAAGGCTGATATCCTGCCCCAAGTGTCTGCCC +
Preference number: 6 (lower is better)
Translates to: AFPVSLFQDMLI*QRLISCPKCLP
Trigger: GGGCAGACACTTGGGGCAGGATATCAGCCTTTGCCAGATCAGCATATCCTGAAATAGGCTGACAGGGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS GCA 72 bp ATTCTGTGCAGGACACGGCTGGCAAGGTTCCCCAAATaGATACTCAGTGCTGGCGCAACAGCATTCAGATTT +
Preference number: 6 (lower is better)
Translates to: ILCRTRLARFPK*ILSAGATAFRF
Trigger: AAATCTGAATGCTGTTGCGCCAGCACTGAGTATGCATTTGGGGAACCTTGCCAGCCGTGTCCTGCACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS GCA 72 bp TTATATCACTGCCTGCTGACGTCATTCCTGGCCCACTaGTGCAGAGTGCCTGATATTCCGCTGAATTCTGTG +
Preference number: 6 (lower is better)
Translates to: LYHCLLTSFLAH*CRVPDIPLNSV
Trigger: CACAGAATTCAGCGGAATATCAGGCACTCTGCAGCAGTGGGCCAGGAATGACGTCAGCAGGCAGTGATATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CCA 72 bp TATCTTAGTGTGCAGTGCTCCTTCACATGTCATCATTaGACCGGGCTCAAATCCCTCCTCGCAGGTGCATTC +
Preference number: 6 (lower is better)
Translates to: YLSVQCSFTCHH*TGLKSLLAGAF
Trigger: GAATGCACCTGCGAGGAGGGATTTGAGCCCGGTCCAATGATGACATGTGAAGGAGCACTGCACACTAAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS CCA 72 bp TGCTTACAGACAGAGGGGCAGAGAAACATACGGAAGTaGATCCTGATCACCAAGGGCTTCAAAGGCAGCCAA +
Preference number: 6 (lower is better)
Translates to: CLQTEGQRNIRK*ILITKGFKGSQ
Trigger: TTGGCTGCCTTTGAAGCCCTTGGTGATCAGGATCCACTTCCGTATGTTTCTCTGCCCCTCTGTCTGTAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682170.1
CDS CAA 72 bp CATGCACATCGATTTGGGGCCACACACCTTCCTCCATaGAGACAGCCACTTTCACAAACAGGTTGTCCACAG +
Preference number: 6 (lower is better)
Translates to: HAHRFGATHLPP*RQPLSQTGCPQ
Trigger: CTGTGGACAACCTGTTTGTGAAAGTGGCTGTCTCAATGGAGGAAGGTGTGTGGCCCCAAATCGATGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000537463.6
CDS CAA 72 bp GAGCAGCACTGGGACTTTAAGGTGGCTCCATTGATGTaGATCTCACATCGCCCATCAATGACAGTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: EQHWDFKVAPLM*ISHRPSMTVCQ
Trigger: CTGGCAGACTGTCATTGATGGGCGATGTGAGATCAACATCAATGGAGCCACCTTAAAGTCCCAGTGCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CAA 72 bp AGGGAGGAGCAGCACTGGGACTTTAAGGTGGCTCCATaGATGTTGATCTCACATCGCCCATCAATGACAGTC +
Preference number: 6 (lower is better)
Translates to: REEQHWDFKVAP*MLISHRPSMTV
Trigger: GACTGTCATTGATGGGCGATGTGAGATCAACATCAATGGAGCCACCTTAAAGTCCCAGTGCTGCTCCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS TCA 72 bp TGTTGTATGGATCTGGAGCCACAGGAAGGAGCTATCTaGCCAGATGGGCAAGTGCACATATTTGGCCTCGAA +
Preference number: 6 (lower is better)
Translates to: CCMDLEPQEGAI*PDGQVHIFGLE
Trigger: TTCGAGGCCAAATATGTGCACTTGCCCATCTGGTCAGATAGCTCCTTCCTGTGGCTCCAGATCCATACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000537463.6
CDS TCA 72 bp ATGCACATCGATTTGGGGCCACACACCTTCCTCCATTaGGACAGCCACTTTCACAAACAGGTTGTCCACAGT +
Preference number: 6 (lower is better)
Translates to: MHIDLGPHTFLH*DSHFHKQVVHS
Trigger: ACTGTGGACAACCTGTTTGTGAAAGTGGCTGTCTCAATGGAGGAAGGTGTGTGGCCCCAAATCGATGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000537463.6
CDS TCA 72 bp CTTCCTGTGGCATCCAAAGTCATTCCACTGGGACACTaGCACTTGAATGACCCCCTAGTGTTAACACACAGG +
Preference number: 6 (lower is better)
Translates to: LPVASKVIPLGH*HLNDPLVLTHR
Trigger: CCTGTGTGTTAACACTAGGGGGTCATTCAAGTGTCAGTGTCCCAGTGGAATGACTTTGGATGCCACAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS GCA 72 bp TCTTTCACACTGGGGTCCAGTAAATCCGTAAGTGCATaGACATCGATTTGGGGCCACACACCTTCCTCCATT +
Preference number: 6 (lower is better)
Translates to: SFTLGSSKSVSA*TSIWGHTPSSI
Trigger: AATGGAGGAAGGTGTGTGGCCCCAAATCGATGTGCATGCACTTACGGATTTACTGGACCCCAGTGTGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000537463.6
CDS GCA 72 bp CAGACAGCGGTAAGATCCCATGGTATTCTTGCAGTCTaGATGCTGGCTGCACATATGGGTTCCATTGGAACA +
Preference number: 6 (lower is better)
Translates to: QTAVRSHGILAV*MLAAHMGSIGT
Trigger: TGTTCCAATGGAACCCATATGTGCAGCCAGCATGCAGACTGCAAGAATACCATGGGATCTTACCGCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316623.10
ENST00000537463.6
ENST00000684448.1
CDS GCA 72 bp TTAAGGCCTACAGTCTTACTTACATCATGGCCAGTCTaGACCCTGCATGGCCCAGAGAGAAATGCAGATGAC +
Preference number: 6 (lower is better)
Translates to: LRPTVLLTSWPV*TLHGPERNADD
Trigger: GTCATCTGCATTTCTCTCTGGGCCATGCAGGGTGCAGACTGGCCATGATGTAAGTAAGACTGTAGGCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560820.1
CDS GCA 72 bp CTGTTCTGGGAGATGAATAATGCCTTCTGGTATGTCTaGTCCCATCACCGAATCGGCCCCCTCCTTATTCAA +
Preference number: 6 (lower is better)
Translates to: LFWEMNNAFWYV*SHHRIGPLLIQ
Trigger: TTGAATAAGGAGGGGGCCGATTCGGTGATGGGAGCAGACATACCAGAAGGCATTATTCATCTCCCAGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS CCA 72 bp AGGTTTCCAGGCGGATATCAAGACAGATCCTTCCTGTaGCATCCAAAGTCATTCCACTGGGACACTGACACT +
Preference number: 6 (lower is better)
Translates to: RFPGGYQDRSFL*HPKSFHWDTDT
Trigger: AGTGTCAGTGTCCCAGTGGAATGACTTTGGATGCCACAGGAAGGATCTGTCTTGATATCCGCCTGGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CAA 72 bp GGTCTCCCAGGAATTACCATAGGAACAGAGCACAGCTaGTTGAAATCCTCGGTTGCTCTGATGGGACACATC +
Preference number: 6 (lower is better)
Translates to: GLPGITIGTEHS*LKSSVALMGHI
Trigger: GATGTGTCCCATCAGAGCAACCGAGGATTTCAACAAGCTGTGCTCTGTTCCTATGGTAATTCCTGGGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS TCA 72 bp GGTTTTCCATCCAGGGCAACAGTAAGCATTATAACGTaGTCCACAGACATTGGGTCCTTTAAGCGCGTCGTG +
Preference number: 6 (lower is better)
Translates to: GFPSRATVSIIT*STDIGSFKRVV
Trigger: CACGACGCGCTTAAAGGACCCAATGTCTGTGGATCACGTTATAATGCTTACTGTTGCCCTGGATGGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000537463.6
CDS GCA 72 bp CTACAGTCTTACTTACATCATGGCCAGTCTGCACCCTaGATGGCCCAGAGAGAAATGCAGATGACAGACATA +
Preference number: 6 (lower is better)
Translates to: LQSYLHHGQSAP*MAQREMQMTDI
Trigger: TATGTCTGTCATCTGCATTTCTCTCTGGGCCATGCAGGGTGCAGACTGGCCATGATGTAAGTAAGACTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560820.1
CDS GCA 72 bp GGAATCTTGCAGTTCTCTGCGTACTTGCTTCACAAGTaGCCAGCGAGGAGACAAATCTCTCAAAAGCAGAGA +
Preference number: 6 (lower is better)
Translates to: GILQFSAYLLHK*PARRQISQKQR
Trigger: TCTCTGCTTTTGAGAGATTTGTCTCCTCGCTGGGCACTTGTGAAGCAAGTACGCAGAGAACTGCAAGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS CCA 72 bp TGTATCCTTCCTTGCACAGACAGCGGTAAGATCCCATaGTATTCTTGCAGTCTGCATGCTGGCTGCACATAT +
Preference number: 6 (lower is better)
Translates to: CILPCTDSGKIP*YSCSLHAGCTY
Trigger: ATATGTGCAGCCAGCATGCAGACTGCAAGAATACCATGGGATCTTACCGCTGTCTGTGCAAGGAAGGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316623.10
ENST00000537463.6
ENST00000684448.1
CDS CCA 72 bp TTACAGGCAACCGCTTTTGCTGTGATTGCCTCCAAATaGCTACAGGATGATGGTGGGTATCTTAGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: LQATAFAVIASK*LQDDGGYLSVQ
Trigger: CTGCACACTAAGATACCCACCATCATCCTGTAGCCATTTGGAGGCAATCACAGCAAAAGCGGTTGCCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS CAA 72 bp CCGGGACTGCAGCTACATTTGAAGCTTCCTGCTGTATaGGTACATACAGCATGTTTGCCACAGTTGTGTGCT +
Preference number: 6 (lower is better)
Translates to: PGLQLHLKLPAV*VHTACLPQLCA
Trigger: AGCACACAACTGTGGCAAACATGCTGTATGTACCAATACAGCAGGAAGCTTCAAATGTAGCTGCAGTCCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316623.10
ENST00000537463.6
ENST00000684448.1
CDS TCA 72 bp TGGCAAACACCACCTCGGCATAGGAGAGGATCTCTCTaGCACTCATCAATATCCATGCAGTTCTTCATCATC +
Preference number: 6 (lower is better)
Translates to: WQTPPRHRRGSL*HSSISMQFFII
Trigger: GATGATGAAGAACTGCATGGATATTGATGAGTGTCAGAGAGATCCTCTCCTATGCCGAGGTGGTGTTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS GCA 72 bp TTGATGTTGATCTCACATCGCCCATCAATGACAGTCTaGCAGCAAGTGCCCTTGATGGTTTCTATGCAGATG +
Preference number: 6 (lower is better)
Translates to: LMLISHRPSMTV*QQVPLMVSMQM
Trigger: CATCTGCATAGAAACCATCAAGGGCACTTGCTGGCAGACTGTCATTGATGGGCGATGTGAGATCAACATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CCA 72 bp GTATCCTGGGCGAACATCTATGCATCTGGTACCATCTaGAGAGGTGTAAAAACCAGGGGGACATTTGCAAAA +
Preference number: 6 (lower is better)
Translates to: VSWANIYASGTI*RGVKTRGTFAK
Trigger: TTTTGCAAATGTCCCCCTGGTTTTTACACCTCTCCAGATGGTACCAGATGCATAGATGTTCGCCCAGGATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS CAA 72 bp CCGGCTGACAGCTACATTCATAGCTGCCTTCAGAGTTaGTGCAGAAGGTTTCACAACCACCATTCATTATGC +
Preference number: 6 (lower is better)
Translates to: PADSYIHSCLQS*CRRFHNHHSLC
Trigger: GCATAATGAATGGTGGTTGTGAAACCTTCTGCACAAACTCTGAAGGCAGCTATGAATGTAGCTGTCAGCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CAA 72 bp TTTTGTAGCACCTCTGTGAAGCAGTACCCTTCCCGATaGTCTGGAAGGGACATTATATGGCAAAGGGGATGT +
Preference number: 6 (lower is better)
Translates to: FCSTSVKQYPSR*SGRDIIWQRGC
Trigger: ACATCCCCTTTGCCATATAATGTCCCTTCCAGACAATCGGGAAGGGTACTGCTTCACAGAGGTGCTACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682170.1
CDS CAA 90 bp GTGCAAATCCCGGCTGACAGCTACATTCATAGCTGCCTTCAGAGTTaGTGCAGAAGGTTTCACAACCACCATTCATTATGCTGCATTCAT +
Preference number: 6 (lower is better)
Translates to: VQIPADSYIHSCLQS*CRRFHNHHSLCCIH
Trigger: ATGAATGCAGCATAATGAATGGTGGTTGTGAAACCTTCTGCACAAACTCTGAAGGCAGCTATGAATGTAGCTGTCAGCCGGGATTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS TCA 72 bp CAGATGCTTATATATTACAGGCAACCGCTTTTGCTGTaGTTGCCTCCAAATGGCTACAGGATGATGGTGGGT +
Preference number: 6 (lower is better)
Translates to: QMLIYYRQPLLL*LPPNGYRMMVG
Trigger: ACCCACCATCATCCTGTAGCCATTTGGAGGCAATCACAGCAAAAGCGGTTGCCTGTAATATATAAGCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674301.1
CDS CCA 72 bp GTTTTCATCTGCAGGCAAAATAAGAAGCGGCATGTGTaGCAGCAGCCAGAGATTTCTATTGAGGACATTGGA +
Preference number: 6 (lower is better)
Translates to: VFICRQNKKRHV*QQPEISIEDIG
Trigger: TCCAATGTCCTCAATAGAAATCTCTGGCTGCTGCCACACATGCCGCTTCTTATTTTGCCTGCAGATGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS TCA 72 bp ATCCAAAGTCATTCCACTGGGACACTGACACTTGAATaGCCCCCTAGTGTTAACACACAGGCCATTTTTACA +
Preference number: 6 (lower is better)
Translates to: IQSHSTGTLTLE*PPSVNTQAIFT
Trigger: TGTAAAAATGGCCTGTGTGTTAACACTAGGGGGTCATTCAAGTGTCAGTGTCCCAGTGGAATGACTTTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS TCA 72 bp AACAAGAAAATGATTTATACACTAGAGATAGGTGGCTaGGCTCTGTGTACCCAGTACTCTGGTGACCACGAG +
Preference number: 6 (lower is better)
Translates to: NKKMIYTLEIGG*ALCTQYSGDHE
Trigger: CTCGTGGTCACCAGAGTACTGGGTACACAGAGCTCAGCCACCTATCTCTAGTGTATAAATCATTTTCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683268.1
CDS GCA 72 bp GAAAGACATTGGCCTAGACAAGCTTATAACTCTCTCTaGTCCCAGAAATACAGGGGAATAGCCATGCTTACA +
Preference number: 6 (lower is better)
Translates to: ERHWPRQAYNSL*SQKYRGIAMLT
Trigger: TGTAAGCATGGCTATTCCCCTGTATTTCTGGGAGCAGAGAGAGTTATAAGCTTGTCTAGGCCAATGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682170.1
CDS CCA 72 bp CAGTACCCTTCCCGATTGTCTGGAAGGGACATTATATaGCAAAGGGGATGTCAGGAAATTTTAAGAGCAAAC +
Preference number: 6 (lower is better)
Translates to: QYPSRLSGRDII*QRGCQEILRAN
Trigger: GTTTGCTCTTAAAATTTCCTGACATCCCCTTTGCCATATAATGTCCCTTCCAGACAATCGGGAAGGGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682170.1
CDS CAA 90 bp TCATTTGCTACAACTGATAGCTTTCCTACCTTCACACTTCTCATTTaGAAGACTGTATCCAGGTGGGCAAATGCATCTGTAGGACCCATC +
Preference number: 6 (lower is better)
Translates to: SFATTDSFPTFTLLI*KTVSRWANASVGPI
Trigger: GATGGGTCCTACAGATGCATTTGCCCACCTGGATACAGTCTTCAAAATGAGAAGTGTGAAGGTAGGAAAGCTATCAGTTGTAGCAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684448.1
CDS CAA 72 bp TTTTGTAGATCTGCCTTTGCAGGGCAGGTTGGAAAGTaGCTGGTAAGACATTTCTTAACTGCCATAGTCCAT +
Preference number: 6 (lower is better)
Translates to: FCRSAFAGQVGK*LVRHFLTAIVH
Trigger: ATGGACTATGGCAGTTAAGAAATGTCTTACCAGCAACTTTCCAACCTGCCCTGCAAAGGCAGATCTACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS GCA 72 bp TGTATTGGTACATACAGCATGTTTGCCACAGTTGTGTaGTCCAATTTCACATTCATTGATGTTGTGGCACAG +
Preference number: 6 (lower is better)
Translates to: CIGTYSMFATVV*SNFTFIDVVAQ
Trigger: CTGTGCCACAACATCAATGAATGTGAAATTGGAGCACACAACTGTGGCAAACATGCTGTATGTACCAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537463.6
CDS CAA 72 bp GAAGAACATTCACAAATAAAAGAGCCTGGGCTGTTCTaGCAGACTCCATTAATGCAAGGACTTGATTCGCAT +
Preference number: 6 (lower is better)
Translates to: EEHSQIKEPGLF*QTPLMQGLDSH
Trigger: ATGCGAATCAAGTCCTTGCATTAATGGAGTCTGCAAGAACAGCCCAGGCTCTTTTATTTGTGAATGTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CAA 72 bp ACAACTGATAGCTTTCCTACCTTCACACTTCTCATTTaGAAGACTGTATCCAGGTGGGCAAATGCATCTGTA +
Preference number: 6 (lower is better)
Translates to: TTDSFPTFTLLI*KTVSRWANASV
Trigger: TACAGATGCATTTGCCCACCTGGATACAGTCTTCAAAATGAGAAGTGTGAAGGTAGGAAAGCTATCAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684448.1
CDS CAA 90 bp TCCCTTGGGGCAGGTACAGACAAAACTTCCAGGAGTATTTCTACATaGTCCATTGTCACAAAGGAGACTGTTCAGTACACATTCATTAAT +
Preference number: 6 (lower is better)
Translates to: SLGAGTDKTSRSIST*SIVTKETVQYTFIN
Trigger: ATTAATGAATGTGTACTGAACAGTCTCCTTTGTGACAATGGACAATGTAGAAATACTCCTGGAAGTTTTGTCTGTACCTGCCCCAAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CAA 90 bp CTAATATATTTTTGTAGATCTGCCTTTGCAGGGCAGGTTGGAAAGTaGCTGGTAAGACATTTCTTAACTGCCATAGTCCATTTTCAGGCA +
Preference number: 6 (lower is better)
Translates to: LIYFCRSAFAGQVGK*LVRHFLTAIVHFQA
Trigger: TGCCTGAAAATGGACTATGGCAGTTAAGAAATGTCTTACCAGCAACTTTCCAACCTGCCCTGCAAAGGCAGATCTACAAAAATATATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682158.1
CDS TCA 72 bp TTCACACTCGTTAATGTCTTTGCAATAACGTCCATCTaGTGCCAGCTGGAATCCAGGTTTGCAAATACATTT +
Preference number: 6 (lower is better)
Translates to: FTLVNVFAITSI*CQLESRFANTF
Trigger: AAATGTATTTGCAAACCTGGATTCCAGCTGGCATCAGATGGACGTTATTGCAAAGACATTAACGAGTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CCA 72 bp TGTTTGTACATTCACCCCCTTCACAGATTCCAGGAATaGTGCTGCATTCATCAATATCTTCACATTTTTGTG +
Preference number: 6 (lower is better)
Translates to: CLYIHPLHRFQE*CCIHQYLHIFV
Trigger: CACAAAAATGTGAAGATATTGATGAATGCAGCACCATTCCTGGAATCTGTGAAGGGGGTGAATGTACAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316623.10
CDS CCA 72 bp CCTAGTGTTAACACACAGGCCATTTTTACACACTCCTaGGAACACTTCACATTCATCTATATCTTCACATTG +
Preference number: 6 (lower is better)
Translates to: PSVNTQAIFTHS*EHFTFIYIFTL
Trigger: CAATGTGAAGATATAGATGAATGTGAAGTGTTCCCAGGAGTGTGTAAAAATGGCCTGTGTGTTAACACTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316623.10
ENST00000684448.1
CDS CAA 72 bp TTAACTGCCATAGTCCATTTTCAGGCATACGTTCATTaGAATGTAGATAGATTGGCCTTCTCTTCACTTAGC +
Preference number: 6 (lower is better)
Translates to: LTAIVHFQAYVH*NVDRLAFSSLS
Trigger: GCTAAGTGAAGAGAAGGCCAATCTATCTACATTCAAATGAACGTATGCCTGAAAATGGACTATGGCAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682158.1