RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBLN7 (Homo sapiens)

Ensembl gene IDs: ENSG00000144152

Ensembl transcript IDs: ENST00000272559.4, ENST00000331203.7, ENST00000409450.7, ENST00000409667.7, ENST00000409903.5, ENST00000441565.5, ENST00000472377.1

Found 465 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTaGCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGGAACAGGCG +
Preference number: 1 (lower is better)
Translates to: LWLLFRAIPWGAVQR*PRSLGALVRGREQA
Trigger: CGCCTGTTCCCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR GCA 90 bp AGGCAGGCAGGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTaGTGGGTCATGGGAGGAGACTCCACTTCCTATGCCACATGCGCA +
Preference number: 1 (lower is better)
Translates to: RQAGMSQRKRQIRTT*WVMGGDSTSYATCA
Trigger: TGCGCATGTGGCATAGGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCCTGCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR CCA 90 bp CAGGCAGGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTaGGTCATGGGAGGAGACTCCACTTCCTATGCCACATGCGCAGAG +
Preference number: 1 (lower is better)
Translates to: QAGMSQRKRQIRTTC*VMGGDSTSYATCAE
Trigger: CTCTGCGCATGTGGCATAGGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCCTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR TCA 90 bp GAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCGCCTGGGTGCACTGGTaGGAGGGCGGGAACAGGCGG +
Preference number: 2 (lower is better)
Translates to: EFCGCSSVLFHGAPCNAAAWVHW*EGGNRR
Trigger: CCGCCTGTTCCCGCCCTCTCACCAGTGCACCCAGGC...GGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR GCA 90 bp GCAGCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCGCTCCACGCAGTCGGTaGCCGAAGCTGAGCCTTCGG +
Preference number: 2 (lower is better)
Translates to: AAVEFCGCSSVLFHGAPCAPRSR*PKLSLR
Trigger: CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGC...GCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR GCA 90 bp CATGGGAGGAGACTCCACTTCCTATGCCACATGCGCAGAGGCATGACTAGGGCCGGCGCCGTGCAACGCTaGCCTAGAAGCCTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: HGRRLHFLCHMRRGMTRAGAVQR*PRSLGA
Trigger: TGCACCCAGGCTTCTAGGGCAGCGTTGCACGGCGCC...GGCCCTAGTCATGCCTCTGCGCATGTGGCATAGGAAGTGGAGTCTCCTCCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR TCA 90 bp GAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGATGAGAAGGCAGGTCGGTGCCCGAAGCTaGGCCTTCGGGGAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: EGSAWGLRPSCDSLMRRQVGARS*AFGEEK
Trigger: TTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGAC...CTGCCTTCTCATCAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR TCA 90 bp AGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCCATCCCCTGCCTGGGTGCACTGGTaGGAGGGCGGGAACAGGCGG +
Preference number: 2 (lower is better)
Translates to: SSNSQGHLHSILESHPSPAWVHW*EGGNRR
Trigger: CCGCCTGTTCCCGCCCTCTCACCAGTGCACCCAGGC...AGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR GCA 90 bp GCAGGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGCGCCGTGCAACGCTaGCCTAGAAGCCTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: AGMSQRKRQIRTTCWVMGGAVQR*PRSLGA
Trigger: TGCACCCAGGCTTCTAGGGCAGCGTTGCACGGCGCC...TCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR GCA 90 bp CAAGCCTGGCTACAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCTTCCATGGGGCGCCGTaGAACGCTGCCCTAGAAGCC +
Preference number: 2 (lower is better)
Translates to: QAWLQKGRRADSHLTHIAFHGAP*NAALEA
Trigger: GGCTTCTAGGGCAGCGTTGCACGGCGCCCCATGGAA...GGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTGTAGCCAGGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR CCA 90 bp GCCTGGCTACAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCACCTTCCGTGCTATTCCATaGGGCGCCGTGCAACGCTGC +
Preference number: 2 (lower is better)
Translates to: AWLQKGRRADSHLTHIATFRAIP*GAVQRC
Trigger: GCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAA...GGTGGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTGTAGCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR TCA 90 bp CCCCGCACGACTAGAACCGTTTCATTCATAGCAAGCCTGGCTACAAAAAGGCAGGTCGGTGCCCGAAGCTaGGCCTTCGGGGAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: PRTTRTVSFIASLATKRQVGARS*AFGEEK
Trigger: TTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGAC...CTGCCTTTTTGTAGCCAGGCTTGCTATGAATGAAACGGTTCTAGTCGTGCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR GCA 90 bp CCCCGCACGACTAGAACCGTTTCATTCATAGCAAGCCTGGCTACAAAAAGGCAGGTGGCTGCTCTTCCGTaGTATTCCATGGGGCGCCGT +
Preference number: 2 (lower is better)
Translates to: PRTTRTVSFIASLATKRQVAALP*YSMGRR
Trigger: ACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCAC...CTGCCTTTTTGTAGCCAGGCTTGCTATGAATGAAACGGTTCTAGTCGTGCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR TCA 90 bp GGCAGGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGGGGCTGATAGTCACCTaGCACACATTGCCACCTTTT +
Preference number: 2 (lower is better)
Translates to: GRHVTEEKADKNNVLGHGGLIVT*HTLPPF
Trigger: AAAAGGTGGCAATGTGTGTCAGGTGACTATCAGCCC...CCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCCTGCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR TCA 90 bp TTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGGGGCTGATAGTCACCTaGCACACATTGCCACCTTTT +
Preference number: 2 (lower is better)
Translates to: LTMGPWSRRICVGFKALLGLIVT*HTLPPF
Trigger: AAAAGGTGGCAATGTGTGTCAGGTGACTATCAGCCC...CAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR CCA 90 bp GTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCATTTGCACAGCATTTTaGAAAGCCACCCATCCCCTG +
Preference number: 2 (lower is better)
Translates to: VTEEKADKNNVLGHGRRLICTAF*KATHPL
Trigger: CAGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAAT...GAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR TCA 90 bp CCAGCTAGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCCAAGTGATGGCAGCAGTTaGGTTTTGTGGCTGCTCTTC +
Preference number: 2 (lower is better)
Translates to: PASSNSQGHLHSILESHPSDGSS*VLWLLF
Trigger: GAAGAGCAGCCACAAAACTCAACTGCTGCCATCACT...TGGGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACTAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR GCA 90 bp CCCCGCACGACTAGAACCGTTTCATTCATAGCAAGCCTGGCTACAAAAAGGCAGGTTGAGTTTTGTGGCTaGTCTTCCGTGCTATTCCAT +
Preference number: 2 (lower is better)
Translates to: PRTTRTVSFIASLATKRQVEFCG*SSVLFH
Trigger: ATGGAATAGCACGGAAGAGCAGCCACAAAACTCAAC...CTGCCTTTTTGTAGCCAGGCTTGCTATGAATGAAACGGTTCTAGTCGTGCGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR GCA 90 bp CATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGAGTTGAGTTTTGTGGCTaGTCTTCCGTGCTATTCCAT +
Preference number: 2 (lower is better)
Translates to: HVTEEKADKNNVLGHGRRVEFCG*SSVLFH
Trigger: ATGGAATAGCACGGAAGAGCAGCCACAAAACTCAAC...TCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR GCA 72 bp GAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTaGCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGG +
Preference number: 3 (lower is better)
Translates to: EGGNRREAPRSR*PKLSLRGREMR
Trigger: CCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
3UTR GCA 72 bp CTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTaGCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGG +
Preference number: 3 (lower is better)
Translates to: LFRAIPWGAVQR*PRSLGALVRGR
Trigger: CCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR GCA 72 bp GGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTaGTGGGTCATGGGAGGAGACTCCACTTCCTATGCC +
Preference number: 3 (lower is better)
Translates to: GMSQRKRQIRTT*WVMGGDSTSYA
Trigger: GGCATAGGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR CCA 72 bp ACTCAGGCAGAATCCATGCTTTTAACAATGGGTCCTTaGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCCTC +
Preference number: 3 (lower is better)
Translates to: TQAESMLLTMGP*SRRICVGFKAL
Trigger: GAGGGCCTTAAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAAAAGCATGGATTCTGCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
3UTR-3UTR CAA 90 bp AAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCCACTTCCTATGCAACTCACAAGGCCATTaGCACAGCATTTTGGAAAGC +
Preference number: 3 (lower is better)
Translates to: KADKNNVLGHGRRLHFLCNSQGH*HSILES
Trigger: GCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTT...GCATAGGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGCCTGGGTGCACTGGTaGGAGGGCGGGAACAGGCGG +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSAWVHW*EGGNRR
Trigger: CCGCCTGTTCCCGCCCTCTCACCAGTGCACCCAGGC...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGCCTGGGTGCACTGGTaGGAGGGCGGGAACAGGCGG +
Preference number: 4 (lower is better)
Translates to: GGNRREAPRSRCPKLSLRAWVHW*EGGNRR
Trigger: CCGCCTGTTCCCGCCCTCTCACCAGTGCACCCAGGC...CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGTTGCGAGGGTCCAGGTaGGCCCGCAGCTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: REQAGGSTQSVPEAEPSGLRGSR*ARSCPH
Trigger: GTGCGGGCAGCTGCGGGCGCACCTGGACCCTCGCAA...CCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGCTGCCCACAGAGTTCTaGAGCGCGGCCAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GGNRREAPRSRCPKLSLRLPTEF*SAASRL
Trigger: GAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAG...CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTGCGGCGCCGCTCAGGTaGAATCCGGCCTCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPAAPLR*NPASQL
Trigger: CAGCTGCGAGGCCGGATTCCACCTGAGCGGCGCCGC...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTGCGGCGCCGCTCAGGTaGAATCCGGCCTCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EGGNRREAPRSRCPKLSLAAPLR*NPASQL
Trigger: CAGCTGCGAGGCCGGATTCCACCTGAGCGGCGCCGC...AAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTGTGTTCACGCAGGCGTaGATGCAGAGCCGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: EGGNRREAPRSRCPKLSLVFTQA*MQSRGR
Trigger: GCGCCCCCGGCTCTGCATGCACGCCTGCGTGAACAC...AAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTGATGGCGGCAGGGCCTaGTGTCCATGGGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPDGGRA*CPWGRG
Trigger: ACCCCTGCCCCATGGACAGCAGGCCCTGCCGCCATC...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGCGCCGTGCAACGCTaGCCTAGAAGCCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSGAVQR*PRSLGA
Trigger: TGCACCCAGGCTTCTAGGGCAGCGTTGCACGGCGCC...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp TGGGGCGCCGTGCAACGCTGCCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGCTGCCCACAGAGTTCTaGAGCGCGGCCAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: WGAVQRCPRSLGALVRGRLPTEF*SAASRL
Trigger: GAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAG...CCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGCGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCTGCCCACAGAGTTCTaGAGCGCGGCCAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: EGGNRREAPRSRCPKLSLLPTEF*SAASRL
Trigger: GAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAG...AAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGAAGACACACCACGCTaGTGGGCCCGACCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: GGNRREAPRSRCPKLSLREDTPR*WARPAG
Trigger: TCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTC...CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGATGCATGTGGTCCCCTaGGGGCACACCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSMHVVP*GHTGCR
Trigger: CCTGCAGCCGGTGTGCCCCCAGGGGACCACATGCAT...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAGGGCCTGCTGTCCATaGGGCAGGGGTTCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: REQAGGSTQSVPEAEPSGRACCP*GRGSAH
Trigger: GTGAGCGGAACCCCTGCCCCATGGACAGCAGGCCCT...CCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGAGCAGCTGCTGCAGCTaGCGGATGGCCGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GGNRREAPRSRCPKLSLRSSCCS*RMAERS
Trigger: GCTCCTCTCGGCCATCCGCCAGCTGCAGCAGCTGCT...CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGCACTCGTTCACGTCCTaGCAGACGCTGTCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: GGNRREAPRSRCPKLSLRHSFTS*QTLSPA
Trigger: CGCCGGCGACAGCGTCTGCCAGGACGTGAACGAGTG...CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTATCCACCGGGGCAGGTaGAACGGTAAGAGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPIHRGR*NGKSPG
Trigger: CCCCGGGCTCTTACCGTTGCACCTGCCCCGGTGGAT...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTGCTCCACGCAGTCGGTaGCCGAAGCTGAGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPAPRSR*PKLSLR
Trigger: CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGC...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp TGGGGCGCCGTGCAACGCTGCCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGGGCGCCGTGCAACGCTaGCCTAGAAGCCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: WGAVQRCPRSLGALVRGRGAVQR*PRSLGA
Trigger: TGCACCCAGGCTTCTAGGGCAGCGTTGCACGGCGCC...CCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGCGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTGAAGACACACCACGCTaGTGGGCCCGACCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPEDTPR*WARPAG
Trigger: TCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTC...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGCCTCTACAGTGGGGCTaGTCCCCTGTCCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: REQAGGSTQSVPEAEPSGPLQWG*SPVQVP
Trigger: TGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGG...CCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGATGGTCTTGGGCAGATaGCGGCAGGGCCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GGNRREAPRSRCPKLSLRMVLGR*RQGLLS
Trigger: GGACAGCAGGCCCTGCCGCCATCTGCCCAAGACCAT...CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp CGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGATGGTCTTGGGCAGATaGCGGCAGGGCCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: REQAGGSTQSVPEAEPSGMVLGR*RQGLLS
Trigger: GGACAGCAGGCCCTGCCGCCATCTGCCCAAGACCAT...CCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGAAGGAGATGGTCTTaGGCAGATGGCGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSGRRWS*ADGGRA
Trigger: GGCCCTGCCGCCATCTGCCCAAGACCATCTCCTTCC...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGCGCTGCATCACAAAGTaGCCGCGGCTGTTCCCACCC +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSRCITK*PRLFPP
Trigger: GGGTGGGAACAGCCGCGGCCACTTTGTGATGCAGCG...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTAGCAGCTGCTGCAGCTaGCGGATGGCCGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPSSCCS*RMAERS
Trigger: GCTCCTCTCGGCCATCCGCCAGCTGCAGCAGCTGCT...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGCGAAGCGTGTCTCCTaGCCCTTCAGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSAKRVS*PFSSCC
Trigger: GCAGCAGCTGCTGAAGGGCCAGGAGACACGCTTCGC...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAGCCGGGCAGGAAACTaGAAGGGCATCTGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: REQAGGSTQSVPEAEPSGSRAGN*KGIWAH
Trigger: GTGGGCCCAGATGCCCTTCCAGTTTCCTGCCCGGCT...CCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAGATGGCGGCAGGGCCTaGTGTCCATGGGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: RREAPRSRCPKLSLRGREDGGRA*CPWGRG
Trigger: ACCCCTGCCCCATGGACAGCAGGCCCTGCCGCCATC...TTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGATGCATGTGGTCCCCTaGGGGCACACCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EQAGGSTQSVPEAEPSGKMHVVP*GHTGCR
Trigger: CCTGCAGCCGGTGTGCCCCCAGGGGACCACATGCAT...CTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGCCTTGGACACGTGGTTaGCCTGGAAGGAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSPWTRG*PGRSGP
Trigger: TGGACCGCTCCTTCCAGGCCAACCACGTGTCCAAGG...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGTGACCTTGGACACGTaGTTGGCCTGGAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSVTLDT*LAWKER
Trigger: CCGCTCCTTCCAGGCCAACCACGTGTCCAAGGTCAC...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTGCTGCAGCTGGCGGATaGCCGAGAGGAGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPAAAGG*PRGAAV
Trigger: AACAGCAGCTCCTCTCGGCCATCCGCCAGCTGCAGC...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTAGCCGGCTCTTCATGTaGCGGATGCCCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPSRLFM*RMPSAK
Trigger: CTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCT...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTAGCTTCCACCGGTGTTaGTGCATGTGGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: EGGNRREAPRSRCPKLSLSFHRC*CMWSPG
Trigger: CCCAGGGGACCACATGCATCAACACCGGTGGAAGCT...AAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGCGGGGCACTCAGGGCTaGCACACTGGAAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: EQAGGSTQSVPEAEPSGKRGTQG*HTGSFH
Trigger: GTGGAAGCTTCCAGTGTGTCAGCCCTGAGTGCCCCG...CTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR TCA 90 bp TGGGGCGCCGTGCAACGCTGCCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGCCATGCGGAAGAGCGTaGTGGGCGTCTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: WGAVQRCPRSLGALVRGRPCGRA*WASSGW
Trigger: CCAACCTGAAGACGCCCATCACGCTCTTCCGCATGG...CCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGCGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR TCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCCACCTCCAGCGTCTaGGGCCCCTCCAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPSTSSV*GPSRLM
Trigger: CATTAACCTGGAGGGGCCTCAGACGCTGGAGGTGGA...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409903.5
CDS-3UTR GCA 90 bp GAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCACGCAGGCGTGCATaGAGAGCCGGGGGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: EAPRSRCPKLSLRGREMRSRRRA*RAGGAP
Trigger: AGGGGCGCCCCCGGCTCTGCATGCACGCCTGCGTGA...CCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAAGCTCACATTGCCGCTaGCCTCGGGGCACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RREAPRSRCPKLSLRGRESSHCR*PRGTQG
Trigger: GCCCTGAGTGCCCCGAGGGCAGCGGCAATGTGAGCT...TTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCACGTAGCTCACATTaGCGCTGCCCTCGGGGCACT +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPSRSSH*RCPRGT
Trigger: AGTGCCCCGAGGGCAGCGGCAATGTGAGCTACGTGA...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGCCCCTCCAGGTTCTaGACAAGGATCAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSGPSRF*TRIRSP
Trigger: TGGGGATCTGATCCTTGTGCAGAACCTGGAGGGGCC...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp GCCGTGCAACGCTGCCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGGAACAGGCTCCACGCAGTCGGTaGCCGAAGCTGAGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: AVQRCPRSLGALVRGREQAPRSR*PKLSLR
Trigger: CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGC...CTGTTCCCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTGTGGCTGCTCTTCCGTaGTATTCCATGGGGCGCCGT +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPVAALP*YSMGRR
Trigger: ACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCAC...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGTTTGTCCCAGCGATaGGGCAGCCGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EQAGGSTQSVPEAEPSGKSLSQR*GSRPCR
Trigger: CCTGCAGGGACGGCTGCCGCATCGCTGGGACAAACT...CTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGCTCCCCTGTCCAGGTaGCATTGGGAAGACACACCA +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSAPLSR*HWEDTP
Trigger: TGGTGTGTCTTCCCAATGGCACCTGGACAGGGGAGC...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGCAAACCGCAGGCTGTTaGGCCCAGCTCGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GGSTQSVPEAEPSGKRNEQTAGC*AQLGRG
Trigger: CCCCCGGCCGAGCTGGGCCCAACAGCCTGCGGTTTG...CTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGACACGTGGTTGGCCTaGAAGGAGCGGTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSDTWLA*KERSRY
Trigger: ATACCTGGACCGCTCCTTCCAGGCCAACCACGTGTC...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGCTGTCCAGGTGCCATTaGGAAGACACACCACGCTGC +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSLSRCH*EDTPRC
Trigger: GCAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAG...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp AACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGACACTCGTTCACGTCCTaGCAGACGCTGTCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: NRREAPRSRCPKLSLRGRHSFTS*QTLSPA
Trigger: CGCCGGCGACAGCGTCTGCCAGGACGTGAACGAGTG...TCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCTCACGCAGGCGTGCATaGAGAGCCGGGGGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: EFCGCSSVLFHGAPCNAASRRRA*RAGGAP
Trigger: AGGGGCGCCCCCGGCTCTGCATGCACGCCTGCGTGA...GGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCTCACGCAGGCGTGCATaGAGAGCCGGGGGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: VPEAEPSGKRNEVSSPHPSRRRA*RAGGAP
Trigger: AGGGGCGCCCCCGGCTCTGCATGCACGCCTGCGTGA...GGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
CDS-3UTR GCA 90 bp AACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGATGGGGGCACACCGGCTaGAGGCCCACACATTCATCC +
Preference number: 4 (lower is better)
Translates to: NRREAPRSRCPKLSLRGRWGHTG*RPTHSS
Trigger: GGATGAATGTGTGGGCCTGCAGCCGGTGTGCCCCCA...TCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGTCACGTAGCTCACATTaGCGCTGCCCTCGGGGCACT +
Preference number: 4 (lower is better)
Translates to: EQAGGSTQSVPEAEPSGKSRSSH*RCPRGT
Trigger: AGTGCCCCGAGGGCAGCGGCAATGTGAGCTACGTGA...CTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCGATGGCGGCAGGGCCTaGTGTCCATGGGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: GSTQSVPEAEPSGKRNEVDGGRA*CPWGRG
Trigger: ACCCCTGCCCCATGGACAGCAGGCCCTGCCGCCATC...GACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp TGGGGCGCCGTGCAACGCTGCCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGGGCCCCTCCAGGTTCTaGACAAGGATCAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: WGAVQRCPRSLGALVRGRGPSRF*TRIRSP
Trigger: TGGGGATCTGATCCTTGTGCAGAACCTGGAGGGGCC...CCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR GCA 90 bp GAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCTCTCCACACCCCAGTaGCCCTGTGTACCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: EGGNRREAPRSRCPKLSLLSTPQ*PCVPSE
Trigger: TTCTGAGGGTACACAGGGGCACTGGGGTGTGGAGAG...AAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCTTCATGTGGCGGATaGCCTCGGCGAAGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPSSCGG*PRRSVS
Trigger: AGACACGCTTCGCCGAGGGCATCCGCCACATGAAGA...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGTCAGGGCTGACACACTaGAAGCTTCCACCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSSGLTH*KLPPVL
Trigger: CAACACCGGTGGAAGCTTCCAGTGTGTCAGCCCTGA...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTCAAACCGCAGGCTGTTaGGCCCAGCTCGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: VLWLLFRAIPWGAVQRCPQTAGC*AQLGRG
Trigger: CCCCCGGCCGAGCTGGGCCCAACAGCCTGCGGTTTG...AGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CCA 90 bp AGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAGCGAAGCGTGTCTCCTaGCCCTTCAGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RREAPRSRCPKLSLRGREAKRVS*PFSSCC
Trigger: GCAGCAGCTGCTGAAGGGCCAGGAGACACGCTTCGC...TTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTAGTGGCCAGGCCTTCTaGGACCGCGCGCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VLWLLFRAIPWGAVQRCPSGQAF*DRAQEA
Trigger: GGCTTCCTGCGCGCGGTCTCAGAAGGCCTGGCCACT...AGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272559.4
CDS-3UTR TCA 90 bp AACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGACCATGCGGAAGAGCGTaGTGGGCGTCTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: NRREAPRSRCPKLSLRGRPCGRA*WASSGW
Trigger: CCAACCTGAAGACGCCCATCACGCTCTTCCGCATGG...TCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp GAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCCACCTCCAGCGTCTaGGGCCCCTCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: EAPRSRCPKLSLRGREMRSTSSV*GPSRFC
Trigger: GCAGAACCTGGAGGGGCCTCAGACGCTGGAGGTGGA...CCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp CGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGGGGATACAAAGATGGTaGCCTTGGACACGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: REQAGGSTQSVPEAEPSGGIQRW*PWTRGW
Trigger: CCAACCACGTGTCCAAGGTCACCATCTTTGTATCCC...CCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGATACAAAGATGGTaGCCTTGGACACGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSGIQRW*PWTRGW
Trigger: CCAACCACGTGTCCAAGGTCACCATCTTTGTATCCC...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GCAGCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCGCCTGGGTGCACTGGTaGGAGGGCGGGAACAGGCGG +
Preference number: 4 (lower is better)
Translates to: AAVEFCGCSSVLFHGAPCAWVHW*EGGNRR
Trigger: CCGCCTGTTCCCGCCCTCTCACCAGTGCACCCAGGC...GCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp CAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCAGCCTGGGTGCACTGGTaGGAGGGCGGGAACAGGCGG +
Preference number: 4 (lower is better)
Translates to: QSVPEAEPSGKRNEVSSPAWVHW*EGGNRR
Trigger: CCGCCTGTTCCCGCCCTCTCACCAGTGCACCCAGGC...TGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp GTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCAGGAAGCCACCCGTaGCGGCAGGAGGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: VEFCGCSSVLFHGAPCNAAGSHP*RQEGGG
Trigger: CCCACCGCCCTCCTGCCGGCACGGGTGGCTTCCTGC...AGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272559.4
CDS-3UTR GCA 90 bp GTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTGTGTTCACGCAGGCGTaGATGCAGAGCCGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: VLWLLFRAIPWGAVQRCPVFTQA*MQSRGR
Trigger: GCGCCCCCGGCTCTGCATGCACGCCTGCGTGAACAC...AGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGTGGGGGCACACCGGCTaGAGGCCCACACATTCATCC +
Preference number: 4 (lower is better)
Translates to: REAPRSRCPKLSLRGREMWGHTG*RPTHSS
Trigger: GGATGAATGTGTGGGCCTGCAGCCGGTGTGCCCCCA...CATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTAGAAGCCTGGGGGCACACCGGCTaGAGGCCCACACATTCATCC +
Preference number: 4 (lower is better)
Translates to: GCSSVLFHGAPCNAALEAWGHTG*RPTHSS
Trigger: GGATGAATGTGTGGGCCTGCAGCCGGTGTGCCCCCA...GGCTTCTAGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGAGCTCACATTGCCGCTaGCCTCGGGGCACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GGSTQSVPEAEPSGKRNESSHCR*PRGTQG
Trigger: GCCCTGAGTGCCCCGAGGGCAGCGGCAATGTGAGCT...CTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTATCAGATCCCCAGTCTaGCGGTCTGAACGCTGCATC +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPIRSPV*RSERCI
Trigger: GATGCAGCGTTCAGACCGGCAGACTGGGGATCTGAT...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp CATGGGAGGAGACTCCACTTCCTATGCCACATGCGCAGAGGCATGACTAGGGCCTTGCGAGGGTCCAGGTaGGCCCGCAGCTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: HGRRLHFLCHMRRGMTRALRGSR*ARSCPH
Trigger: GTGCGGGCAGCTGCGGGCGCACCTGGACCCTCGCAA...GGCCCTAGTCATGCCTCTGCGCATGTGGCATAGGAAGTGGAGTCTCCTCCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTGCCCACAGAGTTCTaGAGCGCGGCCAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: EFCGCSSVLFHGAPCNAALPTEF*SAASRL
Trigger: GAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAG...GGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCGAAGACACACCACGCTaGTGGGCCCGACCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: GSTQSVPEAEPSGKRNEVEDTPR*WARPAG
Trigger: TCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTC...GACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGAGGGCCTGCTGTCCATaGGGCAGGGGTTCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: EAPRSRCPKLSLRGREMRRACCP*GRGSAH
Trigger: GTGAGCGGAACCCCTGCCCCATGGACAGCAGGCCCT...CCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTCAAACCGCAGGCTGTTaGGCCCAGCTCGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSQTAGC*AQLGRG
Trigger: CCCCCGGCCGAGCTGGGCCCAACAGCCTGCGGTTTG...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp CGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGCGCTGCATCACAAAGTaGCCGCGGCTGTTCCCACCC +
Preference number: 4 (lower is better)
Translates to: REAPRSRCPKLSLRGREMRCITK*PRLFPP
Trigger: GGGTGGGAACAGCCGCGGCCACTTTGTGATGCAGCG...CATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp AACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGACCTTGGACACGTGGTTaGCCTGGAAGGAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: NRREAPRSRCPKLSLRGRPWTRG*PGRSGP
Trigger: TGGACCGCTCCTTCCAGGCCAACCACGTGTCCAAGG...TCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGTTGCTGAGACAGTTCTaGGAAGCCCGCGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: REAPRSRCPKLSLRGREMLLRQF*EARGSG
Trigger: CCCCGAGCCGCGGGCTTCCCAGAACTGTCTCAGCAA...CATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR TCA 90 bp AGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAACCCAGTCTGCCGGTCTaGACGCTGCATCACAAAGTG +
Preference number: 4 (lower is better)
Translates to: RREAPRSRCPKLSLRGREPSLPV*TLHHKV
Trigger: CACTTTGTGATGCAGCGTTCAGACCGGCAGACTGGG...TTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp CGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGCATGTACCACCATTTTaGCAAGGCTGGCTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: REQAGGSTQSVPEAEPSGHVPPF*QGWLEH
Trigger: ATGCTCCAGCCAGCCTTGTCAAAATGGTGGTACATG...CCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGCTCACATTGCCGCTaGCCTCGGGGCACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VPEAEPSGKRNEVSSPHPSSHCR*PRGTQG
Trigger: GCCCTGAGTGCCCCGAGGGCAGCGGCAATGTGAGCT...GGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp GAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGCCGATGGCGGCAGGGCCTaGTGTCCATGGGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: EAEPSGKRNEVSSPHPSADGGRA*CPWGRG
Trigger: ACCCCTGCCCCATGGACAGCAGGCCCTGCCGCCATC...GGCACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp GAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGATCAGATCCCCAGTCTaGCGGTCTGAACGCTGCATC +
Preference number: 4 (lower is better)
Translates to: EQAGGSTQSVPEAEPSGKIRSPV*RSERCI
Trigger: GATGCAGCGTTCAGACCGGCAGACTGGGGATCTGAT...CTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp GCCGTGCAACGCTGCCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGGAACAGCTCTCCACACCCCAGTaGCCCTGTGTACCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: AVQRCPRSLGALVRGREQLSTPQ*PCVPSE
Trigger: TTCTGAGGGTACACAGGGGCACTGGGGTGTGGAGAG...CTGTTCCCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAACTCTCCACACCCCAGTaGCCCTGTGTACCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RREAPRSRCPKLSLRGRELSTPQ*PCVPSE
Trigger: TTCTGAGGGTACACAGGGGCACTGGGGTGTGGAGAG...TTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCGCTCCACGCAGTCGGTaGCCGAAGCTGAGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: VPEAEPSGKRNEVSSPHPAPRSR*PKLSLR
Trigger: CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGC...GGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp TTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTAGAGCTCCACGCAGTCGGTaGCCGAAGCTGAGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: LWLLFRAIPWGAVQRCPRAPRSR*PKLSLR
Trigger: CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGC...TCTAGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTAGACTCCACTTCCTATaGCACATGCGCAGAGGCATG +
Preference number: 4 (lower is better)
Translates to: EGGNRREAPRSRCPKLSLRLHFL*HMRRGM
Trigger: CATGCCTCTGCGCATGTGGCATAGGAAGTGGAGTCT...AAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAATCTTCATGTGGCGGATaGCCTCGGCGAAGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: RREAPRSRCPKLSLRGRESSCGG*PRRSVS
Trigger: AGACACGCTTCGCCGAGGGCATCCGCCACATGAAGA...TTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGCATCTGGGCCCACCCTaGCCACAGAGTTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GGSTQSVPEAEPSGKRNEHLGPP*PQSSAA
Trigger: CGCTGCAGAACTCTGTGGGCAGGGTGGGCCCAGATG...CTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCATGGTCTTGGGCAGATaGCGGCAGGGCCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GSTQSVPEAEPSGKRNEVMVLGR*RQGLLS
Trigger: GGACAGCAGGCCCTGCCGCCATCTGCCCAAGACCAT...GACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGCGCTGCATCACAAAGTaGCCGCGGCTGTTCCCACCC +
Preference number: 4 (lower is better)
Translates to: EAPRSRCPKLSLRGREMRRCITK*PRLFPP
Trigger: GGGTGGGAACAGCCGCGGCCACTTTGTGATGCAGCG...CCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp CGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGGTGACCTTGGACACGTaGTTGGCCTGGAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: REAPRSRCPKLSLRGREMVTLDT*LAWKER
Trigger: CCGCTCCTTCCAGGCCAACCACGTGTCCAAGGTCAC...CATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCGCTGCAGCTGGCGGATaGCCGAGAGGAGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: GSTQSVPEAEPSGKRNEVAAAGG*PRGAAV
Trigger: AACAGCAGCTCCTCTCGGCCATCCGCCAGCTGCAGC...GACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCCGGCTCTTCATGTaGCGGATGCCCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GSTQSVPEAEPSGKRNEVSRLFM*RMPSAK
Trigger: CTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCT...GACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp CAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCAGACACACCACGCTGCTaGGCCCGACCAGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: QSVPEAEPSGKRNEVSSPDTPRC*ARPAGT
Trigger: GGTTCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTC...TGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp TCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACGACACACCACGCTGCTaGGCCCGACCAGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: SVPEAEPSGKRNEVSSPHDTPRC*ARPAGT
Trigger: GGTTCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTC...GTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp AGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAACTGATACCTCTACAGTaGGGCTGCTCCCCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RREAPRSRCPKLSLRGRELIPLQ*GCSPVQ
Trigger: CTGGACAGGGGAGCAGCCCCACTGTAGAGGTATCAG...TTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GCAGCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCTCCACCTCCAGCGTCTaGGGCCCCTCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: AAVEFCGCSSVLFHGAPCSTSSV*GPSRFC
Trigger: GCAGAACCTGGAGGGGCCTCAGACGCTGGAGGTGGA...GCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR TCA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTTCCACCTCCAGCGTCTaGGGCCCCTCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSSTSSV*GPSRFC
Trigger: GCAGAACCTGGAGGGGCCTCAGACGCTGGAGGTGGA...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp GTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGGCCTGGGTGCACTGGTaGGAGGGCGGGAACAGGCGG +
Preference number: 4 (lower is better)
Translates to: VLGLEGSAWGLRPSCDSLAWVHW*EGGNRR
Trigger: CCGCCTGTTCCCGCCCTCTCACCAGTGCACCCAGGC...CAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAGACCAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTATCCACCGGGGCAGGTaGAACGGTAAGAGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSIHRGR*NGKSPG
Trigger: CCCCGGGCTCTTACCGTTGCACCTGCCCCGGTGGAT...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
CDS-3UTR GCA 90 bp ACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTAGCTCACATTGCCGCTaGCCTCGGGGCACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TQSVPEAEPSGKRNEVSSSSHCR*PRGTQG
Trigger: GCCCTGAGTGCCCCGAGGGCAGCGGCAATGTGAGCT...AGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp GGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGTCACGTAGCTCACATTaGCGCTGCCCTCGGGGCACT +
Preference number: 4 (lower is better)
Translates to: GGSTQSVPEAEPSGKRNESRSSH*RCPRGT
Trigger: AGTGCCCCGAGGGCAGCGGCAATGTGAGCTACGTGA...CTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGCTCTCCACACCCCAGTaGCCCTGTGTACCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: REAPRSRCPKLSLRGREMLSTPQ*PCVPSE
Trigger: TTCTGAGGGTACACAGGGGCACTGGGGTGTGGAGAG...CATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGGCGCCGTGCAACGCTaGCCTAGAAGCCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSGAVQR*PRSLGA
Trigger: TGCACCCAGGCTTCTAGGGCAGCGTTGCACGGCGCC...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR GCA 90 bp GTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTTTCCATGGGGCGCCGTaGAACGCTGCCCTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VLWLLFRAIPWGAVQRCPFHGAP*NAALEA
Trigger: GGCTTCTAGGGCAGCGTTGCACGGCGCCCCATGGAA...AGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTGGCTGCTCTTCCGTaGTATTCCATGGGGCGCCGT +
Preference number: 4 (lower is better)
Translates to: GGSTQSVPEAEPSGKRNEVAALP*YSMGRR
Trigger: ACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCAC...CTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGAGGTGCGCCCGCAGCTaGCCGCACGAGACAGTCCGC +
Preference number: 4 (lower is better)
Translates to: VLGLEGSAWGLRPSCDSLRCARS*PHETVR
Trigger: GCGGACTGTCTCGTGCGGGCAGCTGCGGGCGCACCT...CAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAGACCAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331203.7
CDS-3UTR GCA 90 bp GTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTAGTTTGTCCCAGCGATaGGGCAGCCGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VLWLLFRAIPWGAVQRCPSLSQR*GSRPCR
Trigger: CCTGCAGGGACGGCTGCCGCATCGCTGGGACAAACT...AGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAACAGTCGGAATCCCGCTaGCTGGGAGGGGAAATAACT +
Preference number: 4 (lower is better)
Translates to: RREAPRSRCPKLSLRGREQSESR*LGGEIT
Trigger: AGTTATTTCCCCTCCCAGGCAGCGGGATTCCGACTG...TTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGATGGCCGAGAGGAGCTaGTGTTTGCTGAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: EQAGGSTQSVPEAEPSGKMAERS*CLLRQF
Trigger: GAACTGTCTCAGCAAACAGCAGCTCCTCTCGGCCAT...CTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCCATCTGGGCCCACCCTaGCCACAGAGTTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: VPEAEPSGKRNEVSSPHPHLGPP*PQSSAA
Trigger: CGCTGCAGAACTCTGTGGGCAGGGTGGGCCCAGATG...GGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp GAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCTCTACAGTGGGGCTaGTCCCCTGTCCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: EAPRSRCPKLSLRGREMRSLQWG*SPVQVP
Trigger: TGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGA...CCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409667.7
CDS-3UTR CCA 90 bp AGAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTGTCTATAATGCAAAGTaGCCAGGCCTTCTGAGACCG +
Preference number: 4 (lower is better)
Translates to: RGREQAGGSTQSVPEAEPVYNAK*PGLLRP
Trigger: CGGTCTCAGAAGGCCTGGCCACTTTGCATTATAGAC...AGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272559.4
CDS-3UTR CCA 90 bp CATGGGAGGAGACTCCACTTCCTATGCCACATGCGCAGAGGCATGACTAGGGCCATGCATGTGGTCCCCTaGGGGCACACCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HGRRLHFLCHMRRGMTRAMHVVP*GHTGCR
Trigger: CCTGCAGCCGGTGTGCCCCCAGGGGACCACATGCAT...GGCCCTAGTCATGCCTCTGCGCATGTGGCATAGGAAGTGGAGTCTCCTCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGCCATGCATGTGGTCCCCTaGGGGCACACCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EAEPSGKRNEVSSPHPSAMHVVP*GHTGCR
Trigger: CCTGCAGCCGGTGTGCCCCCAGGGGACCACATGCAT...GGCACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTTGGGCGTCTTCAGGTTaGAAGGCAGAGAGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: EGGNRREAPRSRCPKLSLWASSG*KAERGN
Trigger: ATTACCTCTCTCTGCCTTCCAACCTGAAGACGCCCA...AAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GCCGTGCAACGCTGCCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGGAACAGCAACGTGCTGGGTCATaGGAGGAGACTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: AVQRCPRSLGALVRGREQQRAGS*EETPLP
Trigger: AGGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTG...CTGTTCCCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGCTAGAAGGATCTGCGTaGGGTTTAAGGCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: EQAGGSTQSVPEAEPSGKLEGSA*GLRPSC
Trigger: ACAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAG...CTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCTTGCTGAGACAGTTCTaGGAAGCCCGCGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VPEAEPSGKRNEVSSPHPLLRQF*EARGSG
Trigger: CCCCGAGCCGCGGGCTTCCCAGAACTGTCTCAGCAA...GGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp TCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACAGCAGCTGCTGCAGCTaGCGGATGGCCGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SVPEAEPSGKRNEVSSPHSSCCS*RMAERS
Trigger: GCTCCTCTCGGCCATCCGCCAGCTGCAGCAGCTGCT...GTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GCAGCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAGCAGCTGCTGCAGCTaGCGGATGGCCGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AAVEFCGCSSVLFHGAPCSSCCS*RMAERS
Trigger: GCTCCTCTCGGCCATCCGCCAGCTGCAGCAGCTGCT...GCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp CCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGCGGGGCACTCAGGGCTaGCACACTGGAAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PKLSLRGREMRSALHTPVRGTQG*HTGSFH
Trigger: GTGGAAGCTTCCAGTGTGTCAGCCCTGAGTGCCCCG...CACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp ACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCGGGGCACTCAGGGCTaGCACACTGGAAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TQSVPEAEPSGKRNEVSSRGTQG*HTGSFH
Trigger: GTGGAAGCTTCCAGTGTGTCAGCCCTGAGTGCCCCG...AGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp GAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGCCCGGGGCACTCAGGGCTaGCACACTGGAAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: EAEPSGKRNEVSSPHPSARGTQG*HTGSFH
Trigger: GTGGAAGCTTCCAGTGTGTCAGCCCTGAGTGCCCCG...GGCACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp GCCGTGCAACGCTGCCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGGAACAGGGGATACAAAGATGGTaGCCTTGGACACGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: AVQRCPRSLGALVRGREQGIQRW*PWTRGW
Trigger: CCAACCACGTGTCCAAGGTCACCATCTTTGTATCCC...CTGTTCCCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCGTCGGTGCCCGAAGCTaGGCCTTCGGGGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VPEAEPSGKRNEVSSPHPVGARS*AFGEEK
Trigger: TTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGAC...GGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp CAGCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAATCCACCGGGGCAGGTaGAACGGTAAGAGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QQLSFVAALPCYSMGRRAIHRGR*NGKSPG
Trigger: CCCCGGGCTCTTACCGTTGCACCTGCCCCGGTGGAT...TGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCTGCCGGTCTGAACGCTaGATCACAAAGTGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: EFCGCSSVLFHGAPCNAACRSER*ITKWPR
Trigger: CCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCA...GGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR GCA 90 bp GGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGTTGAGTTTTGTGGCTaGTCTTCCGTGCTATTCCAT +
Preference number: 4 (lower is better)
Translates to: GGNRREAPRSRCPKLSLRVEFCG*SSVLFH
Trigger: ATGGAATAGCACGGAAGAGCAGCCACAAAACTCAAC...CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGACTCACAAGGCCATTTaGACAGCATTTTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GGNRREAPRSRCPKLSLRTHKAI*TAFWKA
Trigger: GGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGT...CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGAAGACACACCACGCTaGTGGGCCCGACCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: VEFCGCSSVLFHGAPCNAEDTPR*WARPAG
Trigger: TCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTC...AGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGCCTCTACAGTGGGGCTaGTCCCCTGTCCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PKLSLRGREMRSALHTPVPLQWG*SPVQVP
Trigger: TGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGG...CACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409450.7
CDS-3UTR CCA 90 bp CGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGTCAGGGCTGACACACTaGAAGCTTCCACCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: REAPRSRCPKLSLRGREMSGLTH*KLPPVL
Trigger: CAACACCGGTGGAAGCTTCCAGTGTGTCAGCCCTGA...CATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CCA 90 bp ACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTGGAAGGAGATGGTCTTaGGCAGATGGCGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TQSVPEAEPSGKRNEVSSGRRWS*ADGGRA
Trigger: GGCCCTGCCGCCATCTGCCCAAGACCATCTCCTTCC...AGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTGTGACCTTGGACACGTaGTTGGCCTGGAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: VLWLLFRAIPWGAVQRCPVTLDT*LAWKER
Trigger: CCGCTCCTTCCAGGCCAACCACGTGTCCAAGGTCAC...AGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCTTCCGTGCTATTCCATaGGGCGCCGTGCAACGCTGC +
Preference number: 4 (lower is better)
Translates to: EFCGCSSVLFHGAPCNAAFRAIP*GAVQRC
Trigger: GCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAA...GGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GCCGTGCAACGCTGCCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGGAACAGCTAGAAGGATCTGCGTaGGGTTTAAGGCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: AVQRCPRSLGALVRGREQLEGSA*GLRPSC
Trigger: ACAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAG...CTGTTCCCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCATTGCTGAGACAGTTCTaGGAAGCCCGCGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: QSVPEAEPSGKRNEVSSPLLRQF*EARGSG
Trigger: CCCCGAGCCGCGGGCTTCCCAGAACTGTCTCAGCAA...TGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp ACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTGCTGCAGCTGGCGGATaGCCGAGAGGAGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: TQSVPEAEPSGKRNEVSSAAAGG*PRGAAV
Trigger: AACAGCAGCTCCTCTCGGCCATCCGCCAGCTGCAGC...AGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGCGAAGCGTGTCTCCTaGCCCTTCAGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSAKRVS*PFSSCC
Trigger: GCAGCAGCTGCTGAAGGGCCAGGAGACACGCTTCGC...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp CCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGAGCCGGGCAGGAAACTaGAAGGGCATCTGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PKLSLRGREMRSALHTPVSRAGN*KGIWAH
Trigger: GTGGGCCCAGATGCCCTTCCAGTTTCCTGCCCGGCT...CACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp TCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACAGCTTCCACCGGTGTTaGTGCATGTGGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SVPEAEPSGKRNEVSSPHSFHRC*CMWSPG
Trigger: CCCAGGGGACCACATGCATCAACACCGGTGGAAGCT...GTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp CCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGAGCTTCCACCGGTGTTaGTGCATGTGGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PKLSLRGREMRSALHTPVSFHRC*CMWSPG
Trigger: CCCAGGGGACCACATGCATCAACACCGGTGGAAGCT...CACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp GAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGCCCCATGCGGAAGAGCGTaGTGGGCGTCTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: EAEPSGKRNEVSSPHPSAPCGRA*WASSGW
Trigger: CCAACCTGAAGACGCCCATCACGCTCTTCCGCATGG...GGCACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp ACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCATGCGGAAGAGCGTaGTGGGCGTCTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: TQSVPEAEPSGKRNEVSSPCGRA*WASSGW
Trigger: CCAACCTGAAGACGCCCATCACGCTCTTCCGCATGG...AGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp GAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGATGAGAAGGCAGTCCACCTCCAGCGTCTaGGGCCCCTCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: EGSAWGLRPSCDSLMRRQSTSSV*GPSRFC
Trigger: GCAGAACCTGGAGGGGCCTCAGACGCTGGAGGTGGA...CTGCCTTCTCATCAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR TCA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGTCGGTGCCCGAAGCTaGGCCTTCGGGGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSVGARS*AFGEEK
Trigger: TTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGAC...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp ACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTGTCGGTGCCCGAAGCTaGGCCTTCGGGGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: TQSVPEAEPSGKRNEVSSVGARS*AFGEEK
Trigger: TTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGAC...AGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp GCCGTGCAACGCTGCCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGGAACAGAGTGATGGCAGCAGTTaGGTTTTGTGGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AVQRCPRSLGALVRGREQSDGSS*VLWLLF
Trigger: GAAGAGCAGCCACAAAACTCAACTGCTGCCATCACT...CTGTTCCCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CAGCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCATGGGGGCACACCGGCTaGAGGCCCACACATTCATCC +
Preference number: 4 (lower is better)
Translates to: QQLSFVAALPCYSMGRRAWGHTG*RPTHSS
Trigger: GGATGAATGTGTGGGCCTGCAGCCGGTGTGCCCCCA...TGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCATGCCGGTCTGAACGCTaGATCACAAAGTGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: QSVPEAEPSGKRNEVSSPCRSER*ITKWPR
Trigger: CCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCA...TGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp TCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACTGCCGGTCTGAACGCTaGATCACAAAGTGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SVPEAEPSGKRNEVSSPHCRSER*ITKWPR
Trigger: CCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCA...GTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp GGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTAGAAGCCTGGTCTAGAAGGATCTaGGTGGGGTTTAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GCSSVLFHGAPCNAALEAWSRRI*VGFKAL
Trigger: GAGGGCCTTAAACCCCACGCAGATCCTTCTAGACCA...GGCTTCTAGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCCAGTCGGAATCCCGCTaGCTGGGAGGGGAAATAACT +
Preference number: 4 (lower is better)
Translates to: GSTQSVPEAEPSGKRNEVQSESR*LGGEIT
Trigger: AGTTATTTCCCCTCCCAGGCAGCGGGATTCCGACTG...GACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp CGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGCCGCTCACACTGGAATaGAGACGTCTTCACGTAGCT +
Preference number: 4 (lower is better)
Translates to: REAPRSRCPKLSLRGREMPLTLE*RRLHVA
Trigger: AGCTACGTGAAGACGTCTCCATTCCAGTGTGAGCGG...CATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GCCGTGCAACGCTGCCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGGAACAGTGGGCGTCTTCAGGTTaGAAGGCAGAGAGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: AVQRCPRSLGALVRGREQWASSG*KAERGN
Trigger: ATTACCTCTCTCTGCCTTCCAACCTGAAGACGCCCA...CTGTTCCCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CCA 90 bp GGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGACAAACCGCAGGCTGTTaGGCCCAGCTCGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GMSQRKRQIRTTCWVMGGQTAGC*AQLGRG
Trigger: CCCCCGGCCGAGCTGGGCCCAACAGCCTGCGGTTTG...TCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CCA 90 bp GTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCGACACGTGGTTGGCCTaGAAGGAGCGGTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: VPEAEPSGKRNEVSSPHPDTWLA*KERSRY
Trigger: ATACCTGGACCGCTCCTTCCAGGCCAACCACGTGTC...GGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp CCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGCCTTGGACACGTGGTTaGCCTGGAAGGAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: PKLSLRGREMRSALHTPVPWTRG*PGRSGP
Trigger: TGGACCGCTCCTTCCAGGCCAACCACGTGTCCAAGG...CACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp TCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGATGAGAAGGCAGGCAGGCCCTTGGACACGTGGTTaGCCTGGAAGGAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: SAWGLRPSCDSLMRRQAGPWTRG*PGRSGP
Trigger: TGGACCGCTCCTTCCAGGCCAACCACGTGTCCAAGG...GCCTGCCTGCCTTCTCATCAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCCTGTCCAGGTGCCATTaGGAAGACACACCACGCTGC +
Preference number: 4 (lower is better)
Translates to: VPEAEPSGKRNEVSSPHPLSRCH*EDTPRC
Trigger: GCAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAG...GGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp GAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGATGAGAAGGCAGCGGGGCACTCAGGGCTaGCACACTGGAAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: EGSAWGLRPSCDSLMRRQRGTQG*HTGSFH
Trigger: GTGGAAGCTTCCAGTGTGTCAGCCCTGAGTGCCCCG...CTGCCTTCTCATCAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GCAGCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCCCCAGTCTGCCGGTCTaGACGCTGCATCACAAAGTG +
Preference number: 4 (lower is better)
Translates to: AAVEFCGCSSVLFHGAPCPSLPV*TLHHKV
Trigger: CACTTTGTGATGCAGCGTTCAGACCGGCAGACTGGG...GCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR TCA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTCCCAGTCTGCCGGTCTaGACGCTGCATCACAAAGTG +
Preference number: 4 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSPSLPV*TLHHKV
Trigger: CACTTTGTGATGCAGCGTTCAGACCGGCAGACTGGG...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp GGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTAGAAGCCGGGCTGATAGTCACCTaGCACACATTGCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: GCSSVLFHGAPCNAALEAGLIVT*HTLPPF
Trigger: AAAAGGTGGCAATGTGTGTCAGGTGACTATCAGCCC...GGCTTCTAGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp CGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGGTAAAATGGACTTCGTaGTCCACTAAGTACTTGCTT +
Preference number: 4 (lower is better)
Translates to: REQAGGSTQSVPEAEPSGVKWTS*STKYLL
Trigger: AAGCAAGTACTTAGTGGATCACGAAGTCCATTTTAC...CCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCCACTTCCTATGCGTGTTCACGCAGGCGTaGATGCAGAGCCGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: KADKNNVLGHGRRLHFLCVFTQA*MQSRGR
Trigger: GCGCCCCCGGCTCTGCATGCACGCCTGCGTGAACAC...GCATAGGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCATCAGATCCCCAGTCTaGCGGTCTGAACGCTGCATC +
Preference number: 4 (lower is better)
Translates to: VPEAEPSGKRNEVSSPHPIRSPV*RSERCI
Trigger: GATGCAGCGTTCAGACCGGCAGACTGGGGATCTGAT...GGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp CCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGGGCCCCTCCAGGTTCTaGACAAGGATCAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: PKLSLRGREMRSALHTPVGPSRF*TRIRSP
Trigger: TGGGGATCTGATCCTTGTGCAGAACCTGGAGGGGCC...CACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTCTCTCCACACCCCAGTaGCCCTGTGTACCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSLSTPQ*PCVPSE
Trigger: TTCTGAGGGTACACAGGGGCACTGGGGTGTGGAGAG...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp GAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGATGAGAAGGCAGTTCCATGGGGCGCCGTaGAACGCTGCCCTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: EGSAWGLRPSCDSLMRRQFHGAP*NAALEA
Trigger: GGCTTCTAGGGCAGCGTTGCACGGCGCCCCATGGAA...CTGCCTTCTCATCAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGATGGCCGAGAGGAGCTaGTGTTTGCTGAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: GGSTQSVPEAEPSGKRNEMAERS*CLLRQF
Trigger: GAACTGTCTCAGCAAACAGCAGCTCCTCTCGGCCAT...CTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCTGCTTCCAAACTTTCTaGCGTCTGCGGGGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: GSTQSVPEAEPSGKRNEVCFQTF*RLRGCS
Trigger: TGAACACCCCCGCAGACGGCAGAAAGTTTGGAAGCA...GACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp CAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCAGCTCCCCTGTCCAGGTaGCATTGGGAAGACACACCA +
Preference number: 4 (lower is better)
Translates to: QSVPEAEPSGKRNEVSSPAPLSR*HWEDTP
Trigger: TGGTGTGTCTTCCCAATGGCACCTGGACAGGGGAGC...TGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp GAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGCCGCTCCCCTGTCCAGGTaGCATTGGGAAGACACACCA +
Preference number: 4 (lower is better)
Translates to: EAEPSGKRNEVSSPHPSAAPLSR*HWEDTP
Trigger: TGGTGTGTCTTCCCAATGGCACCTGGACAGGGGAGC...GGCACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGATGAGAAGGCAGATGGTCTTGGGCAGATaGCGGCAGGGCCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: EGSAWGLRPSCDSLMRRQMVLGR*RQGLLS
Trigger: GGACAGCAGGCCCTGCCGCCATCTGCCCAAGACCAT...CTGCCTTCTCATCAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CCA 90 bp CGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGTGGGCGTCTTCAGGTTaGAAGGCAGAGAGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: REAPRSRCPKLSLRGREMWASSG*KAERGN
Trigger: ATTACCTCTCTCTGCCTTCCAACCTGAAGACGCCCA...CATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp TCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACGACACGTGGTTGGCCTaGAAGGAGCGGTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: SVPEAEPSGKRNEVSSPHDTWLA*KERSRY
Trigger: ATACCTGGACCGCTCCTTCCAGGCCAACCACGTGTC...GTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGCTAGAAGGATCTGCGTaGGGTTTAAGGCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GGSTQSVPEAEPSGKRNELEGSA*GLRPSC
Trigger: ACAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAG...CTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGTTAACAATGGGTCCTTaGTCTAGAAGGATCTGCGTG +
Preference number: 4 (lower is better)
Translates to: EQAGGSTQSVPEAEPSGKLTMGP*SRRICV
Trigger: CACGCAGATCCTTCTAGACCAAGGACCCATTGTTAA...CTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTCTGTCCAGGTGCCATTaGGAAGACACACCACGCTGC +
Preference number: 4 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSLSRCH*EDTPRC
Trigger: GCAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAG...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GCAGCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCCTGATACCTCTACAGTaGGGCTGCTCCCCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AAVEFCGCSSVLFHGAPCLIPLQ*GCSPVQ
Trigger: CTGGACAGGGGAGCAGCCCCACTGTAGAGGTATCAG...GCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGTCCACATCTCTACAGTaGGGCTGCTCCCCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PKLSLRGREMRSALHTPVSTSLQ*GCSPVQ
Trigger: CTGGACAGGGGAGCAGCCCCACTGTAGAGATGTGGA...CACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409667.7
CDS-3UTR TCA 90 bp GAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGAGTGATGGCAGCAGTTaGGTTTTGTGGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: EAPRSRCPKLSLRGREMRSDGSS*VLWLLF
Trigger: GAAGAGCAGCCACAAAACTCAACTGCTGCCATCACT...CCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCCCCATGTCCTCCCCGTaGTGTCCCCAGTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VTEEKADKNNVLGHGRRLPMSSP*CPQCPG
Trigger: GCCAGGACACTGGGGACAGCACGGGGAGGACATGGG...GAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000272559.4
CDS-3UTR GCA 90 bp AAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCCACTTCCTATGCATCCACCGGGGCAGGTaGAACGGTAAGAGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: KADKNNVLGHGRRLHFLCIHRGR*NGKSPG
Trigger: CCCCGGGCTCTTACCGTTGCACCTGCCCCGGTGGAT...GCATAGGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTATCAGATCCCCAGTCTaGCGGTCTGAACGCTGCATC +
Preference number: 4 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSIRSPV*RSERCI
Trigger: GATGCAGCGTTCAGACCGGCAGACTGGGGATCTGAT...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp CATGGGAGGAGACTCCACTTCCTATGCCACATGCGCAGAGGCATGACTAGGGCCCAGTCGGAATCCCGCTaGCTGGGAGGGGAAATAACT +
Preference number: 4 (lower is better)
Translates to: HGRRLHFLCHMRRGMTRAQSESR*LGGEIT
Trigger: AGTTATTTCCCCTCCCAGGCAGCGGGATTCCGACTG...GGCCCTAGTCATGCCTCTGCGCATGTGGCATAGGAAGTGGAGTCTCCTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCTGCTTCCAAACTTTCTaGCGTCTGCGGGGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: VPEAEPSGKRNEVSSPHPCFQTF*RLRGCS
Trigger: TGAACACCCCCGCAGACGGCAGAAAGTTTGGAAGCA...GGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp GAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGGATCCACTAAGTACTTaGTTCCAAACTTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: EQAGGSTQSVPEAEPSGKDPLST*FQTFCR
Trigger: ACGGCAGAAAGTTTGGAAGCAAGTACTTAGTGGATC...CTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCCACTTCCTATGCATCCGGCCTCGCAGCTaGAGTGCTGAGCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: KADKNNVLGHGRRLHFLCIRPRS*SAEPAP
Trigger: TGGAGCGGGCTCAGCACTGCAGCTGCGAGGCCGGAT...GCATAGGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp TTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGAGGGCCTGCTGTCCATaGGGCAGGGGTTCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: LTMGPWSRRICVGFKALLRACCP*GRGSAH
Trigger: GTGAGCGGAACCCCTGCCCCATGGACAGCAGGCCCT...CAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CCA 90 bp GTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCAGGGCCTGCTGTCCATaGGGCAGGGGTTCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: VTEEKADKNNVLGHGRRLRACCP*GRGSAH
Trigger: GTGAGCGGAACCCCTGCCCCATGGACAGCAGGCCCT...GAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CCA 90 bp GGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGTGGGCGTCTTCAGGTTaGAAGGCAGAGAGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: GGSTQSVPEAEPSGKRNEWASSG*KAERGN
Trigger: ATTACCTCTCTCTGCCTTCCAACCTGAAGACGCCCA...CTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GCCTGGCTACAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCACCGCTGCAGCTGGCGGATaGCCGAGAGGAGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: AWLQKGRRADSHLTHIATAAAGG*PRGAAV
Trigger: AACAGCAGCTCCTCTCGGCCATCCGCCAGCTGCAGC...GGTGGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTGTAGCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACCTGATACCTCTACAGTaGGGCTGCTCCCCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AVEFCGCSSVLFHGAPCNLIPLQ*GCSPVQ
Trigger: CTGGACAGGGGAGCAGCCCCACTGTAGAGGTATCAG...GTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGATGAGAAGCTTCCACCGGTGTTaGTGCATGTGGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLEGSAWGLRPSCDSLMRSFHRC*CMWSPG
Trigger: CCCAGGGGACCACATGCATCAACACCGGTGGAAGCT...TCTCATCAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp CCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGGGGATACAAAGATGGTaGCCTTGGACACGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PKLSLRGREMRSALHTPVGIQRW*PWTRGW
Trigger: CCAACCACGTGTCCAAGGTCACCATCTTTGTATCCC...CACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp GCCTGGCTACAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCACCGTCGGTGCCCGAAGCTaGGCCTTCGGGGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: AWLQKGRRADSHLTHIATVGARS*AFGEEK
Trigger: TTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGAC...GGTGGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTGTAGCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp ATGCTTTTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCGTGTTCACGCAGGCGTaGATGCAGAGCCGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: MLLTMGPWSRRICVGFKAVFTQA*MQSRGR
Trigger: GCGCCCCCGGCTCTGCATGCACGCCTGCGTGAACAC...GGCCTTAAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAAAAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGGGCCCCTCCAGGTTCTaGACAAGGATCAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: VLGLEGSAWGLRPSCDSLGPSRF*TRIRSP
Trigger: TGGGGATCTGATCCTTGTGCAGAACCTGGAGGGGCC...CAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAGACCAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR GCA 90 bp GCCTGGCTACAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCACCGTGGCTGCTCTTCCGTaGTATTCCATGGGGCGCCGT +
Preference number: 4 (lower is better)
Translates to: AWLQKGRRADSHLTHIATVAALP*YSMGRR
Trigger: ACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCAC...GGTGGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTGTAGCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTAGAAGCCGTTGAGTTTTGTGGCTaGTCTTCCGTGCTATTCCAT +
Preference number: 4 (lower is better)
Translates to: GCSSVLFHGAPCNAALEAVEFCG*SSVLFH
Trigger: ATGGAATAGCACGGAAGAGCAGCCACAAAACTCAAC...GGCTTCTAGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GCAGCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAGACTCCACTTCCTATaGCACATGCGCAGAGGCATG +
Preference number: 4 (lower is better)
Translates to: AAVEFCGCSSVLFHGAPCRLHFL*HMRRGM
Trigger: CATGCCTCTGCGCATGTGGCATAGGAAGTGGAGTCT...GCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTCAGATAAGAACAACGTaGTGGGTCATGGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VLWLLFRAIPWGAVQRCPQIRTT*WVMGGD
Trigger: GTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTG...AGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp ACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTTGCTTCCAAACTTTCTaGCGTCTGCGGGGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: TQSVPEAEPSGKRNEVSSCFQTF*RLRGCS
Trigger: TGAACACCCCCGCAGACGGCAGAAAGTTTGGAAGCA...AGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR GCA 90 bp CATGGGAGGAGACTCCACTTCCTATGCCACATGCGCAGAGGCATGACTAGGGCCTGCTTCCAAACTTTCTaGCGTCTGCGGGGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: HGRRLHFLCHMRRGMTRACFQTF*RLRGCS
Trigger: TGAACACCCCCGCAGACGGCAGAAAGTTTGGAAGCA...GGCCCTAGTCATGCCTCTGCGCATGTGGCATAGGAAGTGGAGTCTCCTCCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCCACTTCCTATGCCCTCTACAGTGGGGCTaGTCCCCTGTCCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: KADKNNVLGHGRRLHFLCPLQWG*SPVQVP
Trigger: TGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGG...GCATAGGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGAATCCGGCCTCGCAGCTaGAGTGCTGAGCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: HVTEEKADKNNVLGHGRRIRPRS*SAEPAP
Trigger: TGGAGCGGGCTCAGCACTGCAGCTGCGAGGCCGGAT...TCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGCCGCTCACACTGGAATaGAGACGTCTTCACGTAGCT +
Preference number: 4 (lower is better)
Translates to: PKLSLRGREMRSALHTPVPLTLE*RRLHVA
Trigger: AGCTACGTGAAGACGTCTCCATTCCAGTGTGAGCGG...CACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CCA 90 bp GGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGGAAGGAGATGGTCTTaGGCAGATGGCGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GMSQRKRQIRTTCWVMGGGRRWS*ADGGRA
Trigger: GGCCCTGCCGCCATCTGCCCAAGACCATCTCCTTCC...TCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CCA 90 bp CCCCGCACGACTAGAACCGTTTCATTCATAGCAAGCCTGGCTACAAAAAGGCAGGGAAGGAGATGGTCTTaGGCAGATGGCGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PRTTRTVSFIASLATKRQGRRWS*ADGGRA
Trigger: GGCCCTGCCGCCATCTGCCCAAGACCATCTCCTTCC...CTGCCTTTTTGTAGCCAGGCTTGCTATGAATGAAACGGTTCTAGTCGTGCGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CCA 90 bp GGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGATGAGAGTGACCTTGGACACGTaGTTGGCCTGGAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GLEGSAWGLRPSCDSLMRVTLDT*LAWKER
Trigger: CCGCTCCTTCCAGGCCAACCACGTGTCCAAGGTCAC...TCTCATCAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GCCTGGCTACAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCACCGTGACCTTGGACACGTaGTTGGCCTGGAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: AWLQKGRRADSHLTHIATVTLDT*LAWKER
Trigger: CCGCTCCTTCCAGGCCAACCACGTGTCCAAGGTCAC...GGTGGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTGTAGCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCGCGAAGCGTGTCTCCTaGCCCTTCAGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VTEEKADKNNVLGHGRRLAKRVS*PFSSCC
Trigger: GCAGCAGCTGCTGAAGGGCCAGGAGACACGCTTCGC...GAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp TTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGAGCCGGGCAGGAAACTaGAAGGGCATCTGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LTMGPWSRRICVGFKALLSRAGN*KGIWAH
Trigger: GTGGGCCCAGATGCCCTTCCAGTTTCCTGCCCGGCT...CAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp AGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCCATCCCCTGACACACCACGCTGCTaGGCCCGACCAGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: SSNSQGHLHSILESHPSPDTPRC*ARPAGT
Trigger: GGTTCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTC...AGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp AGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAGTAAAATGGACTTCGTaGTCCACTAAGTACTTGCTT +
Preference number: 4 (lower is better)
Translates to: RREAPRSRCPKLSLRGREVKWTS*STKYLL
Trigger: AAGCAAGTACTTAGTGGATCACGAAGTCCATTTTAC...TTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR TCA 90 bp CAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACATGTACCACCATTTTaGCAAGGCTGGCTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: QSVPEAEPSGKRNEVSSPHVPPF*QGWLEH
Trigger: ATGCTCCAGCCAGCCTTGTCAAAATGGTGGTACATG...TGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409450.7
CDS-3UTR TCA 90 bp GCAGCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCCATGTACCACCATTTTaGCAAGGCTGGCTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: AAVEFCGCSSVLFHGAPCHVPPF*QGWLEH
Trigger: ATGCTCCAGCCAGCCTTGTCAAAATGGTGGTACATG...GCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp TTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTCACGTAGCTCACATTaGCGCTGCCCTCGGGGCACT +
Preference number: 4 (lower is better)
Translates to: LTMGPWSRRICVGFKALLSRSSH*RCPRGT
Trigger: AGTGCCCCGAGGGCAGCGGCAATGTGAGCTACGTGA...CAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CAAGCCTGGCTACAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCTCACGTAGCTCACATTaGCGCTGCCCTCGGGGCACT +
Preference number: 4 (lower is better)
Translates to: QAWLQKGRRADSHLTHIASRSSH*RCPRGT
Trigger: AGTGCCCCGAGGGCAGCGGCAATGTGAGCTACGTGA...GGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTGTAGCCAGGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCCATCCCCTGCTCCACGCAGTCGGTaGCCGAAGCTGAGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: SSNSQGHLHSILESHPSPAPRSR*PKLSLR
Trigger: CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGC...AGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTAGACTCCACTTCCTATaGCACATGCGCAGAGGCATG +
Preference number: 4 (lower is better)
Translates to: VEFCGCSSVLFHGAPCNARLHFL*HMRRGM
Trigger: CATGCCTCTGCGCATGTGGCATAGGAAGTGGAGTCT...AGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTCCGCTCACACTGGAATaGAGACGTCTTCACGTAGCT +
Preference number: 4 (lower is better)
Translates to: VEFCGCSSVLFHGAPCNAPLTLE*RRLHVA
Trigger: AGCTACGTGAAGACGTCTCCATTCCAGTGTGAGCGG...AGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CCA 90 bp CAAGCCTGGCTACAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCTTCCGTGCTATTCCATaGGGCGCCGTGCAACGCTGC +
Preference number: 4 (lower is better)
Translates to: QAWLQKGRRADSHLTHIAFRAIP*GAVQRC
Trigger: GCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAA...GGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTGTAGCCAGGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GCAGCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCATAAGAACAACGTGCTaGGTCATGGGAGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: AAVEFCGCSSVLFHGAPCIRTTC*VMGGDS
Trigger: GGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTAT...GCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGCAGGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGCTGTCCAGGTGCCATTaGGAAGACACACCACGCTGC +
Preference number: 4 (lower is better)
Translates to: GRHVTEEKADKNNVLGHGLSRCH*EDTPRC
Trigger: GCAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAG...CCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCGTTCCCAGTCCTTCCTaGAGGACAAATGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: VPEAEPSGKRNEVSSPHPVPSPS*RTNASV
Trigger: TACAGATGCATTTGTCCTCCAGGAAGGACTGGGAAC...GGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409450.7
CDS-3UTR TCA 90 bp CCCCAGCTAGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCGTCGGTGCCCGAAGCTaGGCCTTCGGGGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: PQLVQTHKAICTAFWKATVGARS*AFGEEK
Trigger: TTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGAC...GGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACTAGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTCAGATAAGAACAACGTaGTGGGTCATGGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VEFCGCSSVLFHGAPCNAQIRTT*WVMGGD
Trigger: GTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTG...AGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCACCTTTTCTCTCCATCTGGGCCCACCCTaGCCACAGAGTTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: QKGRRADSHLTHIATFSLHLGPP*PQSSAA
Trigger: CGCTGCAGAACTCTGTGGGCAGGGTGGGCCCAGATG...GAGAGAAAAGGTGGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCCATCCCCTCATCTGGGCCCACCCTaGCCACAGAGTTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: SSNSQGHLHSILESHPSPHLGPP*PQSSAA
Trigger: CGCTGCAGAACTCTGTGGGCAGGGTGGGCCCAGATG...AGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GCAGGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGACACGTGGTTGGCCTaGAAGGAGCGGTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: AGMSQRKRQIRTTCWVMGDTWLA*KERSRY
Trigger: ATACCTGGACCGCTCCTTCCAGGCCAACCACGTGTC...TCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACACGTGGTTGGCCTaGAAGGAGCGGTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: GMSQRKRQIRTTCWVMGGDTWLA*KERSRY
Trigger: ATACCTGGACCGCTCCTTCCAGGCCAACCACGTGTC...TCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTTTAACAATGGGTCCTTaGTCTAGAAGGATCTGCGTG +
Preference number: 4 (lower is better)
Translates to: VLWLLFRAIPWGAVQRCPLTMGP*SRRICV
Trigger: CACGCAGATCCTTCTAGACCAAGGACCCATTGTTAA...AGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp AGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCCATCCCCTTTGCTGAGACAGTTCTaGGAAGCCCGCGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SSNSQGHLHSILESHPSPLLRQF*EARGSG
Trigger: CCCCGAGCCGCGGGCTTCCCAGAACTGTCTCAGCAA...AGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp AGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCCATCCCCTAGCCGGCTCTTCATGTaGCGGATGCCCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: SSNSQGHLHSILESHPSPSRLFM*RMPSAK
Trigger: CTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCT...AGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CCAGCTAGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCCAAGCCGGCTCTTCATGTaGCGGATGCCCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: PASSNSQGHLHSILESHPSRLFM*RMPSAK
Trigger: CTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCT...TGGGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACTAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGTTCCCAGTCCTTCCTaGAGGACAAATGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSVPSPS*RTNASV
Trigger: TACAGATGCATTTGTCCTCCAGGAAGGACTGGGAAC...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409450.7
CDS-3UTR TCA 90 bp CATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACCCAGTCTGCCGGTCTaGACGCTGCATCACAAAGTG +
Preference number: 4 (lower is better)
Translates to: HVTEEKADKNNVLGHGRRPSLPV*TLHHKV
Trigger: CACTTTGTGATGCAGCGTTCAGACCGGCAGACTGGG...TCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR GCA 90 bp CAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCACCTTTTCTCTCTGCCGGTCTGAACGCTaGATCACAAAGTGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: QKGRRADSHLTHIATFSLCRSER*ITKWPR
Trigger: CCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCA...GAGAGAAAAGGTGGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR GCA 90 bp CAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCAACTCACAAGGCCATTTaGACAGCATTTTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: QSVPEAEPSGKRNEVSSPTHKAI*TAFWKA
Trigger: GGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGT...TGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CCA 90 bp GGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGATCAGGGCTGACACACTaGAAGCTTCCACCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GMSQRKRQIRTTCWVMGGSGLTH*KLPPVL
Trigger: CAACACCGGTGGAAGCTTCCAGTGTGTCAGCCCTGA...TCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CAAGCCTGGCTACAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCTCAGGGCTGACACACTaGAAGCTTCCACCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: QAWLQKGRRADSHLTHIASGLTH*KLPPVL
Trigger: CAACACCGGTGGAAGCTTCCAGTGTGTCAGCCCTGA...GGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTGTAGCCAGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGATGAGACCGCTCACACTGGAATaGAGACGTCTTCACGTAGCT +
Preference number: 4 (lower is better)
Translates to: GLEGSAWGLRPSCDSLMRPLTLE*RRLHVA
Trigger: AGCTACGTGAAGACGTCTCCATTCCAGTGTGAGCGG...TCTCATCAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CCA 90 bp GAATCCATGCTTTTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTCGCTGCATCACAAAGTaGCCGCGGCTGTTCCCACCC +
Preference number: 4 (lower is better)
Translates to: ESMLLTMGPWSRRICVGFRCITK*PRLFPP
Trigger: GGGTGGGAACAGCCGCGGCCACTTTGTGATGCAGCG...AAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAAAAGCATGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CCA 90 bp CCAGCTAGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCCACCTTGGACACGTGGTTaGCCTGGAAGGAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: PASSNSQGHLHSILESHPPWTRG*PGRSGP
Trigger: TGGACCGCTCCTTCCAGGCCAACCACGTGTCCAAGG...TGGGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACTAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCACCTTTTCTCTCTTCCGTGCTATTCCATaGGGCGCCGTGCAACGCTGC +
Preference number: 4 (lower is better)
Translates to: QKGRRADSHLTHIATFSLFRAIP*GAVQRC
Trigger: GCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAA...GAGAGAAAAGGTGGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CAGCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAATTTGCACAGCATTTTaGAAAGCCACCCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: QQLSFVAALPCYSMGRRAICTAF*KATHPL
Trigger: CAGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAAT...TGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGACAACGTGCTGGGTCATaGGAGGAGACTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: GMSQRKRQIRTTCWVMGGQRAGS*EETPLP
Trigger: AGGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTG...TCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp AAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCCACTTCCTATGCCAACGTGCTGGGTCATaGGAGGAGACTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: KADKNNVLGHGRRLHFLCQRAGS*EETPLP
Trigger: AGGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTG...GCATAGGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GCCTGGCTACAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCACCTTTAAGGCCCTCCTGTaGCTCTCTGATGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: AWLQKGRRADSHLTHIATFKALL*LSDEKA
Trigger: TGCCTTCTCATCAGAGAGTCACAGGAGGGCCTTAAA...GGTGGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTGTAGCCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCCACTTCCTATGCTGGTCTAGAAGGATCTaGGTGGGGTTTAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: KADKNNVLGHGRRLHFLCWSRRI*VGFKAL
Trigger: GAGGGCCTTAAACCCCACGCAGATCCTTCTAGACCA...GCATAGGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGATGGTCTAGAAGGATCTaGGTGGGGTTTAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GMSQRKRQIRTTCWVMGGWSRRI*VGFKAL
Trigger: GAGGGCCTTAAACCCCACGCAGATCCTTCTAGACCA...TCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp TTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGATGGCCGAGAGGAGCTaGTGTTTGCTGAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: LTMGPWSRRICVGFKALLMAERS*CLLRQF
Trigger: GAACTGTCTCAGCAAACAGCAGCTCCTCTCGGCCAT...CAGGAGGGCCTTAAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp ATGCTTTTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCTCTTCATGTGGCGGATaGCCTCGGCGAAGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: MLLTMGPWSRRICVGFKASSCGG*PRRSVS
Trigger: AGACACGCTTCGCCGAGGGCATCCGCCACATGAAGA...GGCCTTAAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAAAAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp CAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCAGATCCACTAAGTACTTaGTTCCAAACTTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: QSVPEAEPSGKRNEVSSPDPLST*FQTFCR
Trigger: ACGGCAGAAAGTTTGGAAGCAAGTACTTAGTGGATC...TGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR TCA 90 bp CCCCAGCTAGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCGGGATACAAAGATGGTaGCCTTGGACACGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PQLVQTHKAICTAFWKATGIQRW*PWTRGW
Trigger: CCAACCACGTGTCCAAGGTCACCATCTTTGTATCCC...GGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACTAGCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp CAAGCCTGGCTACAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCGGGCTGATAGTCACCTaGCACACATTGCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: QAWLQKGRRADSHLTHIAGLIVT*HTLPPF
Trigger: AAAAGGTGGCAATGTGTGTCAGGTGACTATCAGCCC...GGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTGTAGCCAGGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGATGAGAAGGCAGACTCACAAGGCCATTTaGACAGCATTTTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: EGSAWGLRPSCDSLMRRQTHKAI*TAFWKA
Trigger: GGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGT...CTGCCTTCTCATCAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCCATCCCCTCAGTCGGAATCCCGCTaGCTGGGAGGGGAAATAACT +
Preference number: 4 (lower is better)
Translates to: SSNSQGHLHSILESHPSPQSESR*LGGEIT
Trigger: AGTTATTTCCCCTCCCAGGCAGCGGGATTCCGACTG...AGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GAATCCATGCTTTTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTTCTTCATGTGGCGGATaGCCTCGGCGAAGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: ESMLLTMGPWSRRICVGFSSCGG*PRRSVS
Trigger: AGACACGCTTCGCCGAGGGCATCCGCCACATGAAGA...AAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAAAAGCATGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp GCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGATCCACTAAGTACTTaGTTCCAAACTTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: AVEFCGCSSVLFHGAPCNDPLST*FQTFCR
Trigger: ACGGCAGAAAGTTTGGAAGCAAGTACTTAGTGGATC...GTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCACCTTTTCTCTCTCAGGGCTGACACACTaGAAGCTTCCACCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: QKGRRADSHLTHIATFSLSGLTH*KLPPVL
Trigger: CAACACCGGTGGAAGCTTCCAGTGTGTCAGCCCTGA...GAGAGAAAAGGTGGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp CCCCAGCTAGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCTTTAAGGCCCTCCTGTaGCTCTCTGATGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PQLVQTHKAICTAFWKATFKALL*LSDEKA
Trigger: TGCCTTCTCATCAGAGAGTCACAGGAGGGCCTTAAA...GGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACTAGCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCCATCCCCTATGGCCGAGAGGAGCTaGTGTTTGCTGAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: SSNSQGHLHSILESHPSPMAERS*CLLRQF
Trigger: GAACTGTCTCAGCAAACAGCAGCTCCTCTCGGCCAT...AGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAATTTGCACAGCATTTTaGAAAGCCACCCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: GMSQRKRQIRTTCWVMGGICTAF*KATHPL
Trigger: CAGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAAT...TCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGAATAAGAACAACGTGCTaGGTCATGGGAGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: HVTEEKADKNNVLGHGRRIRTTC*VMGGDS
Trigger: GGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTAT...TCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp GCAGGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGTTCCCAGTCCTTCCTaGAGGACAAATGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: AGMSQRKRQIRTTCWVMGVPSPS*RTNASV
Trigger: TACAGATGCATTTGTCCTCCAGGAAGGACTGGGAAC...TCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp ATGCTTTTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCCAGATAAGAACAACGTaGTGGGTCATGGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: MLLTMGPWSRRICVGFKAQIRTT*WVMGGD
Trigger: GTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTG...GGCCTTAAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAAAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp ATGCTTTTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTAAGGCCATAAGAACAACGTGCTaGGTCATGGGAGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: MLLTMGPWSRRICVGFKAIRTTC*VMGGDS
Trigger: GGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTAT...GGCCTTAAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAAAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GAATCCATGCTTTTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTAGTGATGGCAGCAGTTaGGTTTTGTGGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ESMLLTMGPWSRRICVGFSDGSS*VLWLLF
Trigger: GAAGAGCAGCCACAAAACTCAACTGCTGCCATCACT...AAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAAAAGCATGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GAATCCATGCTTTTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTGGGCTGATAGTCACCTaGCACACATTGCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: ESMLLTMGPWSRRICVGFGLIVT*HTLPPF
Trigger: AAAAGGTGGCAATGTGTGTCAGGTGACTATCAGCCC...AAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAAAAGCATGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp GAATCCATGCTTTTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTTTTAAGGCCCTCCTGTaGCTCTCTGATGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ESMLLTMGPWSRRICVGFFKALL*LSDEKA
Trigger: TGCCTTCTCATCAGAGAGTCACAGGAGGGCCTTAAA...AAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAAAAGCATGGATTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR GCA 90 bp AGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCCACTTCCGATCCACTAAGTACTTaGTTCCAAACTTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: RKRQIRTTCWVMGGDSTSDPLST*FQTFCR
Trigger: ACGGCAGAAAGTTTGGAAGCAAGTACTTAGTGGATC...GGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CCA 90 bp CATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGATTAACAATGGGTCCTTaGTCTAGAAGGATCTGCGTG +
Preference number: 4 (lower is better)
Translates to: HVTEEKADKNNVLGHGRRLTMGP*SRRICV
Trigger: CACGCAGATCCTTCTAGACCAAGGACCCATTGTTAA...TCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR TCA 90 bp CCCCAGCTAGTTCAAACTCACAAGGCCATTTGCACAGCATTTTGGAAAGCCACCGTAAAATGGACTTCGTaGTCCACTAAGTACTTGCTT +
Preference number: 4 (lower is better)
Translates to: PQLVQTHKAICTAFWKATVKWTS*STKYLL
Trigger: AAGCAAGTACTTAGTGGATCACGAAGTCCATTTTAC...GGTGGCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTTTGAACTAGCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS GCA 90 bp CGTCCCGCGGGGATCGGCGCCGCCCGGGCCTTGCGAGGGTCCAGGTaGGCCCGCAGCTGCCCGCACGAGACAGTCCGCGCGAGGCGGGGA +
Preference number: 5 (lower is better)
Translates to: RPAGIGAARALRGSR*ARSCPHETVRARRG
Trigger: TCCCCGCCTCGCGCGGACTGTCTCGTGCGGGCAGCTGCGGGCGCACCTGGACCCTCGCAAGGCCCGGGCGGCGCCGATCCCCGCGGGACG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331203.7
CDS GCA 90 bp GGAGGGGAAATAACTTTGCCTCCGCTGCCGAGTTTGTCCCAGCGATaGGGCAGCCGTCCCTGCAGGGTGCGGGGCGCCGCGCGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: GGEITLPPLPSLSQR*GSRPCRVRGAARPG
Trigger: CCCCGGCCGCGCGGCGCCCCGCACCCTGCAGGGACGGCTGCCGCATCGCTGGGACAAACTCGGCAGCGGAGGCAAAGTTATTTCCCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS CCA 90 bp AGTGGCCGCGGCTGTTCCCACCCACGATCCCAAACCGCAGGCTGTTaGGCCCAGCTCGGCCGGGGGCAGAGGCTGTGGCCATGCGGAAGA +
Preference number: 5 (lower is better)
Translates to: SGRGCSHPRSQTAGC*AQLGRGQRLWPCGR
Trigger: TCTTCCGCATGGCCACAGCCTCTGCCCCCGGCCGAGCTGGGCCCAACAGCCTGCGGTTTGGGATCGTGGGTGGGAACAGCCGCGGCCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CAA 90 bp AACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGACCAAACCGCAGGCTGTaGGGCCCAGCTCGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: NRREAPRSRCPKLSLRGRPNRRL*GPARPG
Trigger: CCCCGGCCGAGCTGGGCCCAACAGCCTGCGGTTTGG...TCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CAA 90 bp GGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGACCTTGGACACGTGGTaGGCCTGGAAGGAGCGGTCC +
Preference number: 5 (lower is better)
Translates to: GGNRREAPRSRCPKLSLRTLDTW*AWKERS
Trigger: GGACCGCTCCTTCCAGGCCAACCACGTGTCCAAGGT...CCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGAGCTGGGCACCATCTaGCCAGTCGGAATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: GREQAGGSTQSVPEAEPSELGTI*PVGIPL
Trigger: CAGCGGGATTCCGACTGGCAAGATGGTGCCCAGCTC...CGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS GCA 90 bp CAGGAAACTGGAAGGGCATCTGGGCCCACCCTGCCCACAGAGTTCTaGAGCGCGGCCAGCCGGCTCTTCATGTGGCGGATGCCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: QETGRASGPTLPTEF*SAASRLFMWRMPSA
Trigger: CGCCGAGGGCATCCGCCACATGAAGAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAGGGTGGGCCCAGATGCCCTTCCAGTTTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
ENST00000472377.1
CDS GCA 90 bp CTGATACCTGGAAGGGCATCTGGGCCCACCCTGCCCACAGAGTTCTaGAGCGCGGCCAGCCGGCTCTTCATGTGGCGGATGCCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: LIPGRASGPTLPTEF*SAASRLFMWRMPSA
Trigger: CGCCGAGGGCATCCGCCACATGAAGAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAGGGTGGGCCCAGATGCCCTTCCAGGTATCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441565.5
CDS CCA 90 bp ACCCTGCCCACAGAGTTCTGCAGCGCGGCCAGCCGGCTCTTCATGTaGCGGATGCCCTCGGCGAAGCGTGTCTCCTGGCCCTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TLPTEFCSAASRLFM*RMPSAKRVSWPFSS
Trigger: GCTGCTGAAGGGCCAGGAGACACGCTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
ENST00000472377.1
CDS TCA 90 bp GCAGCTGCTGCAGCTGGCGGATGGCCGAGAGGAGCTGCTGTTTGCTaGGACAGTTCTGGGAAGCCCGCGGCTCGGGGCAGGCGAGGATCA +
Preference number: 5 (lower is better)
Translates to: AAAAAGGWPRGAAVC*DSSGKPAARGRRGS
Trigger: TGATCCTCGCCTGCCCCGAGCCGCGGGCTTCCCAGAACTGTCTCAGCAAACAGCAGCTCCTCTCGGCCATCCGCCAGCTGCAGCAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS GCA 90 bp CCACAGAGTTCTGCAGCGCGGCCAGCCGGCTCTTCATGTGGCGGATaGCCTCGGCGAAGCGTGTCTCCTGGCCCTTCAGCAGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: PQSSAARPAGSSCGG*PRRSVSPGPSAAAA
Trigger: TGCAGCAGCTGCTGAAGGGCCAGGAGACACGCTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCTGGCCGCGCTGCAGAACTCTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
ENST00000472377.1
CDS CCA 90 bp GGCAGGCGAGGATCAGGAGCAGAAGGAAGAGCGCGCGCGGAGAGCTaGGCACCATCTTGCCAGTCGGAATCCCGCTGCCTGGGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: GRRGSGAEGRARAES*APSCQSESRCLGGE
Trigger: TTCCCCTCCCAGGCAGCGGGATTCCGACTGGCAAGATGGTGCCCAGCTCTCCGCGCGCGCTCTTCCTTCTGCTCCTGATCCTCGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGACCTTGGACACGTGGTaGGCCTGGAAGGAGCGGTCC +
Preference number: 5 (lower is better)
Translates to: EQAGGSTQSVPEAEPSGKTLDTW*AWKERS
Trigger: GGACCGCTCCTTCCAGGCCAACCACGTGTCCAAGGT...CTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGGAGCTGGGCACCATCTaGCCAGTCGGAATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: EQAGGSTQSVPEAEPSGKELGTI*PVGIPL
Trigger: CAGCGGGATTCCGACTGGCAAGATGGTGCCCAGCTC...CTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCCTGTCCAGGTGCCATaGGGAAGACACACCACGCTG +
Preference number: 5 (lower is better)
Translates to: EGGNRREAPRSRCPKLSLPVQVP*GRHTTL
Trigger: CAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAGG...AAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGCCCCAAACCGCAGGCTGTaGGGCCCAGCTCGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: EAEPSGKRNEVSSPHPSAPNRRL*GPARPG
Trigger: CCCCGGCCGAGCTGGGCCCAACAGCCTGCGGTTTGG...GGCACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CAA 90 bp CAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACCAAACCGCAGGCTGTaGGGCCCAGCTCGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: QSVPEAEPSGKRNEVSSPPNRRL*GPARPG
Trigger: CCCCGGCCGAGCTGGGCCCAACAGCCTGCGGTTTGG...TGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CAA 90 bp AACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAACCTTGGACACGTGGTaGGCCTGGAAGGAGCGGTCC +
Preference number: 5 (lower is better)
Translates to: NRREAPRSRCPKLSLRGRTLDTW*AWKERS
Trigger: GGACCGCTCCTTCCAGGCCAACCACGTGTCCAAGGT...TCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CAA 90 bp CGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGGGAGGGGAAATAACTTaGCCTCCGCTGCCGAGTTTG +
Preference number: 5 (lower is better)
Translates to: REQAGGSTQSVPEAEPSGGGEIT*PPLPSL
Trigger: CAAACTCGGCAGCGGAGGCAAAGTTATTTCCCCTCC...CCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGCCTGTCCAGGTGCCATaGGGAAGACACACCACGCTG +
Preference number: 5 (lower is better)
Translates to: EQAGGSTQSVPEAEPSGKPVQVP*GRHTTL
Trigger: CAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAGG...CTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS GCA 90 bp GCGCGCGCGGAGAGCTGGGCACCATCTTGCCAGTCGGAATCCCGCTaGCTGGGAGGGGAAATAACTTTGCCTCCGCTGCCGAGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: ARAESWAPSCQSESR*LGGEITLPPLPSLS
Trigger: GGACAAACTCGGCAGCGGAGGCAAAGTTATTTCCCCTCCCAGGCAGCGGGATTCCGACTGGCAAGATGGTGCCCAGCTCTCCGCGCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS CCA 90 bp CATCCACATCTCTACAGTGGGGCTGCTCCCCTGTCCAGGTGCCATTaGGAAGACACACCACGCTGCTGGGCCCGACCAGCCGGAACCCAG +
Preference number: 5 (lower is better)
Translates to: HPHLYSGAAPLSRCH*EDTPRCWARPAGTQ
Trigger: CTGGGTTCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGATGTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409667.7
CDS-3UTR CAA 90 bp GAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAAGCTTCCACCGGTGTaGATGCATGTGGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: EQAGGSTQSVPEAEPSGKKLPPV*MHVVPW
Trigger: CCAGGGGACCACATGCATCAACACCGGTGGAAGCTT...CTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GAGGGCGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTACAAAGATGGTGACCTaGGACACGTGGTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: EGGNRREAPRSRCPKLSLTKMVT*DTWLAW
Trigger: CCAGGCCAACCACGTGTCCAAGGTCACCATCTTTGT...AAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS TCA 90 bp AGCTCACACTCGTTCACGTCTATAATGCAAAGTGGCCAGGCCTTCTaGGACCGCGCGCAGGAAGCCACCCGTGCCGGCAGGAGGGCGGTG +
Preference number: 5 (lower is better)
Translates to: SSHSFTSIMQSGQAF*DRAQEATRAGRRAV
Trigger: CACCGCCCTCCTGCCGGCACGGGTGGCTTCCTGCGCGCGGTCTCAGAAGGCCTGGCCACTTTGCATTATAGACGTGAACGAGTGTGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272559.4
CDS TCA 90 bp GGTGCCCAGAGCCGGCACTGCGGCCACACTTCACACAGGAACCCATaGCAGCGCAGGACGTGGCACCATTACAACACCCACTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GAQSRHCGHTSHRNP*QRRTWHHYNTHLAG
Trigger: CCCTGCCAAGTGGGTGTTGTAATGGTGCCACGTCCTGCGCTGTCATGGGTTCCTGTGTGAAGTGTGGCCGCAGTGCCGGCTCTGGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS GCA 90 bp CACAGCTCTTCCCGTCAGCCAGAGTTCGGTATCCACCGGGGCAGGTaGAACGGTAAGAGCCCGGGGTGTTCACGCAGGCGTGCATGCAGA +
Preference number: 5 (lower is better)
Translates to: HSSSRQPEFGIHRGR*NGKSPGCSRRRACR
Trigger: TCTGCATGCACGCCTGCGTGAACACCCCGGGCTCTTACCGTTGCACCTGCCCCGGTGGATACCGAACTCTGGCTGACGGGAAGAGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409903.5
ENST00000441565.5
CDS-3UTR CAA 90 bp CGGGAACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGCATTTGCACAGCATTTaGGAAAGCCACCCATCCCCT +
Preference number: 5 (lower is better)
Translates to: REQAGGSTQSVPEAEPSGHLHSI*ESHPSP
Trigger: AGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAATG...CCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS GCA 90 bp CACATTCATCCACATCTCTACAGTGGGGCTGCTCCCCTGTCCAGGTaGCATTGGGAAGACACACCACGCTGCTGGGCCCGACCAGCCGGA +
Preference number: 5 (lower is better)
Translates to: HIHPHLYSGAAPLSR*HWEDTPRCWARPAG
Trigger: TCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGATGTGGATGAATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409667.7
CDS CCA 90 bp GGAAGGAGATGGTCTTGGGCAGATGGCGGCAGGGCCTGCTGTCCATaGGGCAGGGGTTCCGCTCACACTGGAATGGAGACGTCTTCACGT +
Preference number: 5 (lower is better)
Translates to: GRRWSWADGGRACCP*GRGSAHTGMETSSR
Trigger: ACGTGAAGACGTCTCCATTCCAGTGTGAGCGGAACCCCTGCCCCATGGACAGCAGGCCCTGCCGCCATCTGCCCAAGACCATCTCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000441565.5
CDS CCA 90 bp GGAACCCATGACAGCGCAGGACGTGGCACCATTACAACACCCACTTaGCAGGGGCGGAAGCCGCATAGGTCTCTGAGCCACGGTGGCCTA +
Preference number: 5 (lower is better)
Translates to: GTHDSAGRGTITTPT*QGRKPHRSLSHGGL
Trigger: TAGGCCACCGTGGCTCAGAGACCTATGCGGCTTCCGCCCCTGCCAAGTGGGTGTTGTAATGGTGCCACGTCCTGCGCTGTCATGGGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS-3UTR CAA 90 bp GCCGTGCAACGCTGCCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGGAACAGGGAGGGGAAATAACTTaGCCTCCGCTGCCGAGTTTG +
Preference number: 5 (lower is better)
Translates to: AVQRCPRSLGALVRGREQGGEIT*PPLPSL
Trigger: CAAACTCGGCAGCGGAGGCAAAGTTATTTCCCCTCC...CTGTTCCCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp AACAGGCGGGAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAAGCCGGAACCCAGGGTaGCAGGTAAAATGGACTTCG +
Preference number: 5 (lower is better)
Translates to: NRREAPRSRCPKLSLRGRSRNPG*QVKWTS
Trigger: CGAAGTCCATTTTACCTGCAACCCTGGGTTCCGGCT...TCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTCCCGCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS TCA 90 bp CCCCTCCAGGTTCTGCACAAGGATCAGATCCCCAGTCTGCCGGTCTaGACGCTGCATCACAAAGTGGCCGCGGCTGTTCCCACCCACGAT +
Preference number: 5 (lower is better)
Translates to: PLQVLHKDQIPSLPV*TLHHKVAAAVPTHD
Trigger: ATCGTGGGTGGGAACAGCCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCAGACTGGGGATCTGATCCTTGTGCAGAACCTGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS TCA 90 bp GAGCGGTCCAGGTATTCCGACATGTCGACGTCCACCTCCAGCGTCTaGGGCCCCTCCAGGTTCTGCACAAGGATCAGATCCCCAGTCTGC +
Preference number: 5 (lower is better)
Translates to: ERSRYSDMSTSTSSV*GPSRFCTRIRSPVC
Trigger: GCAGACTGGGGATCTGATCCTTGTGCAGAACCTGGAGGGGCCTCAGACGCTGGAGGTGGACGTCGACATGTCGGAATACCTGGACCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS CCA 90 bp AGGATCAGATCCCCAGTCTGCCGGTCTGAACGCTGCATCACAAAGTaGCCGCGGCTGTTCCCACCCACGATCCCAAACCGCAGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RIRSPVCRSERCITK*PRLFPPTIPNRRLL
Trigger: CAACAGCCTGCGGTTTGGGATCGTGGGTGGGAACAGCCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCAGACTGGGGATCTGATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CAA 90 bp CCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGTGGAAGGAGATGGTCTaGGGCAGATGGCGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PKLSLRGREMRSALHTPVWKEMV*GRWRQG
Trigger: GCCCTGCCGCCATCTGCCCAAGACCATCTCCTTCCA...CACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CAA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTACCTTGGACACGTGGTaGGCCTGGAAGGAGCGGTCC +
Preference number: 5 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSTLDTW*AWKERS
Trigger: GGACCGCTCCTTCCAGGCCAACCACGTGTCCAAGGT...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CAA 90 bp GGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTAGAAGCCACAAAGATGGTGACCTaGGACACGTGGTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GCSSVLFHGAPCNAALEATKMVT*DTWLAW
Trigger: CCAGGCCAACCACGTGTCCAAGGTCACCATCTTTGT...GGCTTCTAGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp CAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCAGAGCTGGGCACCATCTaGCCAGTCGGAATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: QSVPEAEPSGKRNEVSSPELGTI*PVGIPL
Trigger: CAGCGGGATTCCGACTGGCAAGATGGTGCCCAGCTC...TGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS CCA 90 bp GGTCCTCCTCTCCCCACAGCAGGATGTCCTCACCTAACCCCATGGTaGCTACATACCAGTCTGGGCCTGATGCTGACAGCGGTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: GPPLPTAGCPHLTPW*LHTSLGLMLTAVPS
Trigger: ACTGGGAACCGCTGTCAGCATCAGGCCCAGACTGGTATGTAGCCACCATGGGGTTAGGTGAGGACATCCTGCTGTGGGGAGAGGAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS-3UTR CAA 90 bp GTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGAGCTGGGCACCATCTaGCCAGTCGGAATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: VEFCGCSSVLFHGAPCNAELGTI*PVGIPL
Trigger: CAGCGGGATTCCGACTGGCAAGATGGTGCCCAGCTC...AGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp CCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGCCTGTCCAGGTGCCATaGGGAAGACACACCACGCTG +
Preference number: 5 (lower is better)
Translates to: PKLSLRGREMRSALHTPVPVQVP*GRHTTL
Trigger: CAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAGG...CACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS GCA 90 bp AGGTTCTGCACAAGGATCAGATCCCCAGTCTGCCGGTCTGAACGCTaGATCACAAAGTGGCCGCGGCTGTTCCCACCCACGATCCCAAAC +
Preference number: 5 (lower is better)
Translates to: RFCTRIRSPVCRSER*ITKWPRLFPPTIPN
Trigger: GTTTGGGATCGTGGGTGGGAACAGCCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCAGACTGGGGATCTGATCCTTGTGCAGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CAA 90 bp CCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTGAAGCTTCCACCGGTGTaGATGCATGTGGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: PKLSLRGREMRSALHTPVKLPPV*MHVVPW
Trigger: CCAGGGGACCACATGCATCAACACCGGTGGAAGCTT...CACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CAA 90 bp GAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGATGAGAAGGCAGACCTTGGACACGTGGTaGGCCTGGAAGGAGCGGTCC +
Preference number: 5 (lower is better)
Translates to: EGSAWGLRPSCDSLMRRQTLDTW*AWKERS
Trigger: GGACCGCTCCTTCCAGGCCAACCACGTGTCCAAGGT...CTGCCTTCTCATCAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCACAAAGATGGTGACCTaGGACACGTGGTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VPEAEPSGKRNEVSSPHPTKMVT*DTWLAW
Trigger: CCAGGCCAACCACGTGTCCAAGGTCACCATCTTTGT...GGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CAA 90 bp GCAGGCATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGACCTCCGCTGCCGAGTTaGTCCCAGCGATGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: AGMSQRKRQIRTTCWVMGPPLPS*SQRCGS
Trigger: GCTGCCGCATCGCTGGGACAAACTCGGCAGCGGAGG...TCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp AGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCCACTTCCCCTCCGCTGCCGAGTTaGTCCCAGCGATGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: RKRQIRTTCWVMGGDSTSPPLPS*SQRCGS
Trigger: GCTGCCGCATCGCTGGGACAAACTCGGCAGCGGAGG...GGAAGTGGAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCGAGAGGAGCTGCTGTTaGCTGAGACAGTTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: GSTQSVPEAEPSGKRNEVERSCC*LRQFWE
Trigger: TTCCCAGAACTGTCTCAGCAAACAGCAGCTCCTCTC...GACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CAA 90 bp TTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCTAGAAGCCGGAACCCAGGGTaGCAGGTAAAATGGACTTCG +
Preference number: 5 (lower is better)
Translates to: LWLLFRAIPWGAVQRCPRSRNPG*QVKWTS
Trigger: CGAAGTCCATTTTACCTGCAACCCTGGGTTCCGGCT...TCTAGGGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS TCA 90 bp ATTGGAGGGATGCTCCTCCAGGGAACTGGAAAGGCATGGGCCAGCTaGTGGGAAGGAAGGTGTCAGGCTGAGGGACAAGGTGAGCAAGAG +
Preference number: 5 (lower is better)
Translates to: IGGMLLQGTGKAWAS*WEGRCQAEGQGEQE
Trigger: CTCTTGCTCACCTTGTCCCTCAGCCTGACACCTTCCTTCCCATCAGCTGGCCCATGCCTTTCCAGTTCCCTGGAGGAGCATCCCTCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS-3UTR CAA 90 bp GCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACAAGCTTCCACCGGTGTaGATGCATGTGGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: AVEFCGCSSVLFHGAPCNKLPPV*MHVVPW
Trigger: CCAGGGGACCACATGCATCAACACCGGTGGAAGCTT...GTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTAAGCTTCCACCGGTGTaGATGCATGTGGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: VEFCGCSSVLFHGAPCNAKLPPV*MHVVPW
Trigger: CCAGGGGACCACATGCATCAACACCGGTGGAAGCTT...AGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GAATCCATGCTTTTAACAATGGGTCCTTGGTCTAGAAGGATCTGCGTGGGGTTTCCAAACCGCAGGCTGTaGGGCCCAGCTCGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: ESMLLTMGPWSRRICVGFPNRRL*GPARPG
Trigger: CCCCGGCCGAGCTGGGCCCAACAGCCTGCGGTTTGG...AAACCCCACGCAGATCCTTCTAGACCAAGGACCCATTGTTAAAAGCATGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CAA 90 bp GCCGTGCAACGCTGCCCTAGAAGCCTGGGTGCACTGGTGAGAGGGCGGGAACAGAACTCACAAGGCCATTaGCACAGCATTTTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: AVQRCPRSLGALVRGREQNSQGH*HSILES
Trigger: GCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTT...CTGTTCCCGCCCTCTCACCAGTGCACCCAGGCTTCTAGGGCAGCGTTGCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp CAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCAGGAGGGGAAATAACTTaGCCTCCGCTGCCGAGTTTG +
Preference number: 5 (lower is better)
Translates to: QSVPEAEPSGKRNEVSSPGGEIT*PPLPSL
Trigger: CAAACTCGGCAGCGGAGGCAAAGTTATTTCCCCTCC...TGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CAA 90 bp GTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCGAGAGGAGCTGCTGTTaGCTGAGACAGTTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: VPEAEPSGKRNEVSSPHPERSCC*LRQFWE
Trigger: TTCCCAGAACTGTCTCAGCAAACAGCAGCTCCTCTC...GGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS-3UTR CAA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTAGCCGGAACCCAGGGTaGCAGGTAAAATGGACTTCG +
Preference number: 5 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSSRNPG*QVKWTS
Trigger: CGAAGTCCATTTTACCTGCAACCCTGGGTTCCGGCT...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS TCA 90 bp GGCCCGACCAGCCGGAACCCAGGGTTGCAGGTAAAATGGACTTCGTaGTCCACTAAGTACTTGCTTCCAAACTTTCTGCCGTCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: GPTSRNPGLQVKWTS*STKYLLPNFLPSAG
Trigger: CCCCGCAGACGGCAGAAAGTTTGGAAGCAAGTACTTAGTGGATCACGAAGTCCATTTTACCTGCAACCCTGGGTTCCGGCTGGTCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
ENST00000472377.1
CDS TCA 90 bp CCATTACAACACCCACTTGGCAGGGGCGGAAGCCGCATAGGTCTCTaGGCCACGGTGGCCTATCCAGGATTTAAAACCCAGTGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: PLQHPLGRGGSRIGL*ATVAYPGFKTQCAF
Trigger: GAAGGCACACTGGGTTTTAAATCCTGGATAGGCCACCGTGGCTCAGAGACCTATGCGGCTTCCGCCCCTGCCAAGTGGGTGTTGTAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CCA 90 bp GTGGCCTATCCAGGATTTAAAACCCAGTGTGCCTTCTCCAGCCGCTaGTGTGACAAGATGGCCGGACTCACCTTAGAGAGGGGTGCACAG +
Preference number: 5 (lower is better)
Translates to: VAYPGFKTQCAFSSR*CDKMAGLTLERGAQ
Trigger: CTGTGCACCCCTCTCTAAGGTGAGTCCGGCCATCTTGTCACACCAGCGGCTGGAGAAGGCACACTGGGTTTTAAATCCTGGATAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS-3UTR CAA 90 bp CAGCAGTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACAAAGATGGTGACCTaGGACACGTGGTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QQLSFVAALPCYSMGRRATKMVT*DTWLAW
Trigger: CCAGGCCAACCACGTGTCCAAGGTCACCATCTTTGT...TGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAACTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCCATTTGCACAGCATTTaGGAAAGCCACCCATCCCCT +
Preference number: 5 (lower is better)
Translates to: EFCGCSSVLFHGAPCNAAHLHSI*ESHPSP
Trigger: AGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAATG...GGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GTTGAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGGAGGGGAAATAACTTaGCCTCCGCTGCCGAGTTTG +
Preference number: 5 (lower is better)
Translates to: VEFCGCSSVLFHGAPCNAGGEIT*PPLPSL
Trigger: CAAACTCGGCAGCGGAGGCAAAGTTATTTCCCCTCC...AGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GAGTTTTGTGGCTGCTCTTCCGTGCTATTCCATGGGGCGCCGTGCAACGCTGCCACATGTACCACCATTTaGACAAGGCTGGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: EFCGCSSVLFHGAPCNAATCTTI*TRLAGA
Trigger: TGCTCCAGCCAGCCTTGTCAAAATGGTGGTACATGT...GGCAGCGTTGCACGGCGCCCCATGGAATAGCACGGAAGAGCAGCCACAAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS CCA 90 bp GGCGGCAGTCTGGGCCTGATGCTGACAGCGGTTCCCAGTCCTTCCTaGAGGACAAATGCATCTGTACTGGTTGACTCCTTCTACACATGT +
Preference number: 5 (lower is better)
Translates to: GGSLGLMLTAVPSPS*RTNASVLVDSFYTC
Trigger: ACATGTGTAGAAGGAGTCAACCAGTACAGATGCATTTGTCCTCCAGGAAGGACTGGGAACCGCTGTCAGCATCAGGCCCAGACTGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409903.5
ENST00000441565.5
CDS-3UTR CAA 90 bp GAAGGATCTGCGTGGGGTTTAAGGCCCTCCTGTGACTCTCTGATGAGAAGGCAGACAAAGATGGTGACCTaGGACACGTGGTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: EGSAWGLRPSCDSLMRRQTKMVT*DTWLAW
Trigger: CCAGGCCAACCACGTGTCCAAGGTCACCATCTTTGT...CTGCCTTCTCATCAGAGAGTCACAGGAGGGCCTTAAACCCCACGCAGATCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGACTCCCTGTCCAGGTGCCATaGGGAAGACACACCACGCTG +
Preference number: 5 (lower is better)
Translates to: VTEEKADKNNVLGHGRRLPVQVP*GRHTTL
Trigger: CAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAGG...GAGTCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp ACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTACATGTACCACCATTTaGACAAGGCTGGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: TQSVPEAEPSGKRNEVSSTCTTI*TRLAGA
Trigger: TGCTCCAGCCAGCCTTGTCAAAATGGTGGTACATGT...AGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409450.7
CDS TCA 90 bp TGGGTTGTGCCTTTCACAGCCTCGGTATTATCTTCAGCAAGTCTCTaGGGTCCCCAATGCCCAAGCCAAGCAAGGAGCTTGGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: WVVPFTASVLSSASL*GPQCPSQARSLGST
Trigger: TGTGGACCCCAAGCTCCTTGCTTGGCTTGGGCATTGGGGACCTCAGAGACTTGCTGAAGATAATACCGAGGCTGTGAAAGGCACAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CCA 90 bp CCCAGATGCGTGATGGCTGTTCATGGAGACTATGAGGATAGGAGCTaGCTTTGGATATGCCTGCTTGCTTCCCCTCCTTCCCATTCCTGG +
Preference number: 5 (lower is better)
Translates to: PRCVMAVHGDYEDRS*LWICLLASPPSHSW
Trigger: CCAGGAATGGGAAGGAGGGGAAGCAAGCAGGCATATCCAAAGCCAGCTCCTATCCTCATAGTCTCCATGAACAGCCATCACGCATCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS-3UTR CAA 90 bp GAGGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGATGCATCTGTACTGGTaGACTCCTTCTACACATGTA +
Preference number: 5 (lower is better)
Translates to: EAPRSRCPKLSLRGREMRMHLYW*TPSTHV
Trigger: TACATGTGTAGAAGGAGTCAACCAGTACAGATGCAT...CCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GGCTCCACGCAGTCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCATGCATCTGTACTGGTaGACTCCTTCTACACATGTA +
Preference number: 5 (lower is better)
Translates to: GSTQSVPEAEPSGKRNEVMHLYW*TPSTHV
Trigger: TACATGTGTAGAAGGAGTCAACCAGTACAGATGCAT...GACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGACTGCGTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409450.7
CDS GCA 90 bp GGGCTCTGCACCCCAGGATGCTCAGGGTACTTTGAGTTTGAACCCTaGTGGCTGCCTGTAACTCTACATTTACACTCCATGCGCAATTCC +
Preference number: 5 (lower is better)
Translates to: GLCTPGCSGYFEFEP*WLPVTLHLHSMRNS
Trigger: GGAATTGCGCATGGAGTGTAAATGTAGAGTTACAGGCAGCCAGCAGGGTTCAAACTCAAAGTACCCTGAGCATCCTGGGGTGCAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CCA 90 bp CACGTCAGTCTGGGCCTGATGCTGACAGCGGTTCCCAGTCCTTCCTaGAGGACAAATGCATCTGTACTGGTTGACTCCTTCTACACATGT +
Preference number: 5 (lower is better)
Translates to: HVSLGLMLTAVPSPS*RTNASVLVDSFYTC
Trigger: ACATGTGTAGAAGGAGTCAACCAGTACAGATGCATTTGTCCTCCAGGAAGGACTGGGAACCGCTGTCAGCATCAGGCCCAGACTGACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409450.7
CDS CCA 90 bp GCTGCCCAGCTAACCTTTGTCCAGAGGCCATCTGCACCTGTGGATTaGGTTGTGCCTTTCACAGCCTCGGTATTATCTTCAGCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: AAQLTFVQRPSAPVD*VVPFTASVLSSASL
Trigger: GAGACTTGCTGAAGATAATACCGAGGCTGTGAAAGGCACAACCCAATCCACAGGTGCAGATGGCCTCTGGACAAAGGTTAGCTGGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS-3UTR CAA 90 bp CCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACCCCAGTAACTCACAAGGCCATTaGCACAGCATTTTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: PEAEPSGKRNEVSSPHPSNSQGH*HSILES
Trigger: GCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTT...ACTGGGGTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CAA 90 bp TCGGTGCCCGAAGCTGAGCCTTCGGGGAAGAGAAATGAGGTCAGCTCTCCACACAACTCACAAGGCCATTaGCACAGCATTTTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: SVPEAEPSGKRNEVSSPHNSQGH*HSILES
Trigger: GCTTTCCAAAATGCTGTGCAAATGGCCTTGTGAGTT...GTGTGGAGAGCTGACCTCATTTCTCTTCCCCGAAGGCTCAGCTTCGGGCACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272559.4
ENST00000331203.7
CDS-3UTR CAA 90 bp GCCTGGCTACAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCACCGAGAGGAGCTGCTGTTaGCTGAGACAGTTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: AWLQKGRRADSHLTHIATERSCC*LRQFWE
Trigger: TTCCCAGAACTGTCTCAGCAAACAGCAGCTCCTCTC...GGTGGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTGTAGCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS GCA 90 bp ATTTCACCTGCTTGCTGCCCAGCTAACCTTTGTCCAGAGGCCATCTaGACCTGTGGATTGGGTTGTGCCTTTCACAGCCTCGGTATTATC +
Preference number: 5 (lower is better)
Translates to: ISPACCPANLCPEAI*TCGLGCAFHSLGII
Trigger: GATAATACCGAGGCTGTGAAAGGCACAACCCAATCCACAGGTGCAGATGGCCTCTGGACAAAGGTTAGCTGGGCAGCAAGCAGGTGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CCA 90 bp CATACCAGTCTGGGCCTGATGCTGACAGCGGTTCCCAGTCCTTCCTaGAGGACAAATGCATCTGTACTGGTTGACTCCTTCTACACATGT +
Preference number: 5 (lower is better)
Translates to: HTSLGLMLTAVPSPS*RTNASVLVDSFYTC
Trigger: ACATGTGTAGAAGGAGTCAACCAGTACAGATGCATTTGTCCTCCAGGAAGGACTGGGAACCGCTGTCAGCATCAGGCCCAGACTGGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS-3UTR CAA 90 bp CATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGAAGCCGGAACCCAGGGTaGCAGGTAAAATGGACTTCG +
Preference number: 5 (lower is better)
Translates to: HVTEEKADKNNVLGHGRRSRNPG*QVKWTS
Trigger: CGAAGTCCATTTTACCTGCAACCCTGGGTTCCGGCT...TCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp GCCTGGCTACAAAAAGGCAGAAGGGCTGATAGTCACCTGACACACATTGCCACCACATGTACCACCATTTaGACAAGGCTGGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: AWLQKGRRADSHLTHIATTCTTI*TRLAGA
Trigger: TGCTCCAGCCAGCCTTGTCAAAATGGTGGTACATGT...GGTGGCAATGTGTGTCAGGTGACTATCAGCCCTTCTGCCTTTTTGTAGCCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS CCA 90 bp CTCTGCACCCCAGGATGCTCAGGGTACTTTGAGTTTGAACCCTGCTaGCTGCCTGTAACTCTACATTTACACTCCATGCGCAATTCCAGT +
Preference number: 5 (lower is better)
Translates to: LCTPGCSGYFEFEPC*LPVTLHLHSMRNSS
Trigger: ACTGGAATTGCGCATGGAGTGTAAATGTAGAGTTACAGGCAGCCAGCAGGGTTCAAACTCAAAGTACCCTGAGCATCCTGGGGTGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CCA 90 bp CTCACAGAGACAGAAAGAAGAATGAATGGTGATTACCAGGGGCTGTaGGGAGGGCAATGGGGAGTTGTCCTGTTATGGGTACAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: LTETERRMNGDYQGL*GGQWGVVLLWVQKL
Trigger: GAGCTTCTGTACCCATAACAGGACAACTCCCCATTGCCCTCCCCACAGCCCCTGGTAATCACCATTCATTCTTCTTTCTGTCTCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS-3UTR CAA 90 bp CCCCGCACGACTAGAACCGTTTCATTCATAGCAAGCCTGGCTACAAAAAGGCAGCATTTGCACAGCATTTaGGAAAGCCACCCATCCCCT +
Preference number: 5 (lower is better)
Translates to: PRTTRTVSFIASLATKRQHLHSI*ESHPSP
Trigger: AGGGGATGGGTGGCTTTCCAAAATGCTGTGCAAATG...CTGCCTTTTTGTAGCCAGGCTTGCTATGAATGAAACGGTTCTAGTCGTGCGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409903.5
CDS-3UTR CAA 90 bp CATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGAGAGAGGAGCTGCTGTTaGCTGAGACAGTTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: HVTEEKADKNNVLGHGRRERSCC*LRQFWE
Trigger: TTCCCAGAACTGTCTCAGCAAACAGCAGCTCCTCTC...TCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS TCA 90 bp ATACAGATTTTACGAAAGCAAGTGAGGATGCAGGGAGGGGAGATGTaGCAGGACTGCCGTGGTACAGGAGAGGATAATTTCTGTTGCACC +
Preference number: 5 (lower is better)
Translates to: IQILRKQVRMQGGEM*QDCRGTGEDNFCCT
Trigger: GGTGCAACAGAAATTATCCTCTCCTGTACCACGGCAGTCCTGTCACATCTCCCCTCCCTGCATCCTCACTTGCTTTCGTAAAATCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS-3UTR CAA 90 bp CATGTCACAGAGGAAAAGGCAGATAAGAACAACGTGCTGGGTCATGGGAGGAGAATGCATCTGTACTGGTaGACTCCTTCTACACATGTA +
Preference number: 5 (lower is better)
Translates to: HVTEEKADKNNVLGHGRRMHLYW*TPSTHV
Trigger: TACATGTGTAGAAGGAGTCAACCAGTACAGATGCAT...TCTCCTCCCATGACCCAGCACGTTGTTCTTATCTGCCTTTTCCTCTGTGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS TCA 90 bp CCTTATCACTGGATTTTCTTGCCATATGCAAAACCAGGCACCACGTaGCTTCTTAGACTCTCTGGGTCGAGATATGTTGAGACTCAAGAT +
Preference number: 5 (lower is better)
Translates to: PYHWIFLPYAKPGTT*LLRLSGSRYVETQD
Trigger: ATCTTGAGTCTCAACATATCTCGACCCAGAGAGTCTAAGAAGTCACGTGGTGCCTGGTTTTGCATATGGCAAGAAAATCCAGTGATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS TCA 90 bp AGCTCAGTTTTGCAAGACAAAAAGAATTCTGGAGCTGGATGGTGGTaGTGGTCGCACAACAATGTGAATGTGATTAATGCCACTGAGCTG +
Preference number: 5 (lower is better)
Translates to: SSVLQDKKNSGAGWW*WSHNNVNVINATEL
Trigger: CAGCTCAGTGGCATTAATCACATTCACATTGTTGTGCGACCATCACCACCATCCAGCTCCAGAATTCTTTTTGTCTTGCAAAACTGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS TCA 90 bp TTTCAAGGATTGATGGGAATCAAACACAAGTGGACAAATCCTGCATaGTTCTACTTAGATGAGGTCCCTAGAGCAGTCAGACTCACAGAG +
Preference number: 5 (lower is better)
Translates to: FQGLMGIKHKWTNPA*FYLDEVPRAVRLTE
Trigger: CTCTGTGAGTCTGACTGCTCTAGGGACCTCATCTAAGTAGAATCATGCAGGATTTGTCCACTTGTGTTTGATTCCCATCAATCCTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CCA 90 bp CTGTTATGGGTACAGAAGCTCAGTTTTGCAAGACAAAAAGAATTCTaGAGCTGGATGGTGGTGATGGTCGCACAACAATGTGAATGTGAT +
Preference number: 5 (lower is better)
Translates to: LLWVQKLSFARQKEF*SWMVVMVAQQCECD
Trigger: ATCACATTCACATTGTTGTGCGACCATCACCACCATCCAGCTCCAGAATTCTTTTTGTCTTGCAAAACTGAGCTTCTGTACCCATAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS GCA 72 bp GCCCGGGCCTTGCGAGGGTCCAGGTGCGCCCGCAGCTaGCCGCACGAGACAGTCCGCGCGAGGCGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: ARALRGSRCARS*PHETVRARRGG
Trigger: GCCTCCCCGCCTCGCGCGGACTGTCTCGTGCGGGCAGCTGCGGGCGCACCTGGACCCTCGCAAGGCCCGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331203.7
CDS GCA 72 bp GGGATCGGCGCCGCCCGGGCCTTGCGAGGGTCCAGGTaGGCCCGCAGCTGCCCGCACGAGACAGTCCGCGCG +
Preference number: 6 (lower is better)
Translates to: GIGAARALRGSR*ARSCPHETVRA
Trigger: CGCGCGGACTGTCTCGTGCGGGCAGCTGCGGGCGCACCTGGACCCTCGCAAGGCCCGGGCGGCGCCGATCCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331203.7
CDS CAA 72 bp CGGCTGTTCCCACCCACGATCCCAAACCGCAGGCTGTaGGGCCCAGCTCGGCCGGGGGCAGAGGCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: RLFPPTIPNRRL*GPARPGAEAVA
Trigger: GGCCACAGCCTCTGCCCCCGGCCGAGCTGGGCCCAACAGCCTGCGGTTTGGGATCGTGGGTGGGAACAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS CAA 90 bp AAGTGGCCGCGGCTGTTCCCACCCACGATCCCAAACCGCAGGCTGTaGGGCCCAGCTCGGCCGGGGGCAGAGGCTGTGGCCATGCGGAAG +
Preference number: 6 (lower is better)
Translates to: KWPRLFPPTIPNRRL*GPARPGAEAVAMRK
Trigger: CTTCCGCATGGCCACAGCCTCTGCCCCCGGCCGAGCTGGGCCCAACAGCCTGCGGTTTGGGATCGTGGGTGGGAACAGCCGCGGCCACTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS CAA 90 bp TCCCGCTGCCTGGGAGGGGAAATAACTTTGCCTCCGCTGCCGAGTTaGTCCCAGCGATGCGGCAGCCGTCCCTGCAGGGTGCGGGGCGCC +
Preference number: 6 (lower is better)
Translates to: SRCLGGEITLPPLPS*SQRCGSRPCRVRGA
Trigger: GGCGCCCCGCACCCTGCAGGGACGGCTGCCGCATCGCTGGGACAAACTCGGCAGCGGAGGCAAAGTTATTTCCCCTCCCAGGCAGCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS GCA 72 bp ATAACTTTGCCTCCGCTGCCGAGTTTGTCCCAGCGATaGGGCAGCCGTCCCTGCAGGGTGCGGGGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: ITLPPLPSLSQR*GSRPCRVRGAA
Trigger: CGCGGCGCCCCGCACCCTGCAGGGACGGCTGCCGCATCGCTGGGACAAACTCGGCAGCGGAGGCAAAGTTAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS TCA 72 bp GCAGCTGGCGGATGGCCGAGAGGAGCTGCTGTTTGCTaGGACAGTTCTGGGAAGCCCGCGGCTCGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: AAGGWPRGAAVC*DSSGKPAARGR
Trigger: CCTGCCCCGAGCCGCGGGCTTCCCAGAACTGTCTCAGCAAACAGCAGCTCCTCTCGGCCATCCGCCAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS GCA 72 bp TCTGCAGCGCGGCCAGCCGGCTCTTCATGTGGCGGATaGCCTCGGCGAAGCGTGTCTCCTGGCCCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: SAARPAGSSCGG*PRRSVSPGPSA
Trigger: TGCTGAAGGGCCAGGAGACACGCTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCTGGCCGCGCTGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
ENST00000472377.1
CDS GCA 72 bp GGAAGGGCATCTGGGCCCACCCTGCCCACAGAGTTCTaGAGCGCGGCCAGCCGGCTCTTCATGTGGCGGATG +
Preference number: 6 (lower is better)
Translates to: GRASGPTLPTEF*SAASRLFMWRM
Trigger: CATCCGCCACATGAAGAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAGGGTGGGCCCAGATGCCCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
ENST00000441565.5
ENST00000472377.1
CDS GCA 72 bp CCCCTGTCCAGGTGCCATTGGGAAGACACACCACGCTaGTGGGCCCGACCAGCCGGAACCCAGGGTTGCAGG +
Preference number: 6 (lower is better)
Translates to: PLSRCHWEDTPR*WARPAGTQGCR
Trigger: CCTGCAACCCTGGGTTCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
ENST00000472377.1
CDS CCA 72 bp ACAGAGTTCTGCAGCGCGGCCAGCCGGCTCTTCATGTaGCGGATGCCCTCGGCGAAGCGTGTCTCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: TEFCSAASRLFM*RMPSAKRVSWP
Trigger: GGGCCAGGAGACACGCTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCTGGCCGCGCTGCAGAACTCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
ENST00000472377.1
CDS CAA 72 bp CCTCTACAGTGGGGCTGCTCCCCTGTCCAGGTGCCATaGGGAAGACACACCACGCTGCTGGGCCCGACCAGC +
Preference number: 6 (lower is better)
Translates to: PLQWGCSPVQVP*GRHTTLLGPTS
Trigger: GCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409903.5
ENST00000472377.1
CDS GCA 72 bp GGAAGGAGATGGTCTTGGGCAGATGGCGGCAGGGCCTaGTGTCCATGGGGCAGGGGTTCCGCTCACACTGGA +
Preference number: 6 (lower is better)
Translates to: GRRWSWADGGRA*CPWGRGSAHTG
Trigger: TCCAGTGTGAGCGGAACCCCTGCCCCATGGACAGCAGGCCCTGCCGCCATCTGCCCAAGACCATCTCCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000441565.5
CDS CCA 72 bp TGGTCTTGGGCAGATGGCGGCAGGGCCTGCTGTCCATaGGGCAGGGGTTCCGCTCACACTGGAATGGAGACG +
Preference number: 6 (lower is better)
Translates to: WSWADGGRACCP*GRGSAHTGMET
Trigger: CGTCTCCATTCCAGTGTGAGCGGAACCCCTGCCCCATGGACAGCAGGCCCTGCCGCCATCTGCCCAAGACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000441565.5
CDS CCA 72 bp GGATCAGGAGCAGAAGGAAGAGCGCGCGCGGAGAGCTaGGCACCATCTTGCCAGTCGGAATCCCGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: GSGAEGRARAES*APSCQSESRCL
Trigger: CAGGCAGCGGGATTCCGACTGGCAAGATGGTGCCCAGCTCTCCGCGCGCGCTCTTCCTTCTGCTCCTGATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS CAA 72 bp TCTCTACAGTGGGGCTGCTCCCCTGTCCAGGTGCCATaGGGAAGACACACCACGCTGCTGGGCCCGACCAGC +
Preference number: 6 (lower is better)
Translates to: SLQWGCSPVQVP*GRHTTLLGPTS
Trigger: GCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409667.7
CDS GCA 72 bp CCACATCTCTACAGTGGGGCTGCTCCCCTGTCCAGGTaGCATTGGGAAGACACACCACGCTGCTGGGCCCGA +
Preference number: 6 (lower is better)
Translates to: PHLYSGAAPLSR*HWEDTPRCWAR
Trigger: TCGGGCCCAGCAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGATGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409667.7
CDS CCA 72 bp TTGCCGCTGCCCTCGGGGCACTCAGGGCTGACACACTaGAAGCTTCCACCGGTGTTGATGCATGTGGTCCCC +
Preference number: 6 (lower is better)
Translates to: LPLPSGHSGLTH*KLPPVLMHVVP
Trigger: GGGGACCACATGCATCAACACCGGTGGAAGCTTCCAGTGTGTCAGCCCTGAGTGCCCCGAGGGCAGCGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
ENST00000441565.5
CDS CCA 72 bp TCCCCAGTCTGCCGGTCTGAACGCTGCATCACAAAGTaGCCGCGGCTGTTCCCACCCACGATCCCAAACCGC +
Preference number: 6 (lower is better)
Translates to: SPVCRSERCITK*PRLFPPTIPNR
Trigger: GCGGTTTGGGATCGTGGGTGGGAACAGCCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCAGACTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS CAA 72 bp CACTCAGGGCTGACACACTGGAAGCTTCCACCGGTGTaGATGCATGTGGTCCCCTGGGGGCACACCGGCTGC +
Preference number: 6 (lower is better)
Translates to: HSGLTHWKLPPV*MHVVPWGHTGC
Trigger: GCAGCCGGTGTGCCCCCAGGGGACCACATGCATCAACACCGGTGGAAGCTTCCAGTGTGTCAGCCCTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
ENST00000441565.5
CDS CAA 72 bp CTGGGAGGGGAAATAACTTTGCCTCCGCTGCCGAGTTaGTCCCAGCGATGCGGCAGCCGTCCCTGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: LGGEITLPPLPS*SQRCGSRPCRV
Trigger: CACCCTGCAGGGACGGCTGCCGCATCGCTGGGACAAACTCGGCAGCGGAGGCAAAGTTATTTCCCCTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS CAA 90 bp CCATCTTGCCAGTCGGAATCCCGCTGCCTGGGAGGGGAAATAACTTaGCCTCCGCTGCCGAGTTTGTCCCAGCGATGCGGCAGCCGTCCC +
Preference number: 6 (lower is better)
Translates to: PSCQSESRCLGGEIT*PPLPSLSQRCGSRP
Trigger: GGGACGGCTGCCGCATCGCTGGGACAAACTCGGCAGCGGAGGCAAAGTTATTTCCCCTCCCAGGCAGCGGGATTCCGACTGGCAAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331203.7
ENST00000409903.5
CDS CAA 90 bp TCACTGATACCTCTACAGTGGGGCTGCTCCCCTGTCCAGGTGCCATaGGGAAGACACACCACGCTGCTGGGCCCGACCAGCCGGAACCCA +
Preference number: 6 (lower is better)
Translates to: SLIPLQWGCSPVQVP*GRHTTLLGPTSRNP
Trigger: TGGGTTCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGGTATCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409903.5
ENST00000472377.1
CDS CAA 90 bp TCATCCACATCTCTACAGTGGGGCTGCTCCCCTGTCCAGGTGCCATaGGGAAGACACACCACGCTGCTGGGCCCGACCAGCCGGAACCCA +
Preference number: 6 (lower is better)
Translates to: SSTSLQWGCSPVQVP*GRHTTLLGPTSRNP
Trigger: TGGGTTCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTCCCAATGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGATGTGGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409667.7
CDS TCA 72 bp TCGTTCACGTCTATAATGCAAAGTGGCCAGGCCTTCTaGGACCGCGCGCAGGAAGCCACCCGTGCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: SFTSIMQSGQAF*DRAQEATRAGR
Trigger: CCTGCCGGCACGGGTGGCTTCCTGCGCGCGGTCTCAGAAGGCCTGGCCACTTTGCATTATAGACGTGAACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272559.4
CDS GCA 72 bp GAGGCCCAACTCCCTCCTCAGGGGACCTCAGTCTTTTaGATGAGGGCCACCCACACTAGGAGGCGAATCGGC +
Preference number: 6 (lower is better)
Translates to: EAQLPPQGTSVF*MRATHTRRRIG
Trigger: GCCGATTCGCCTCCTAGTGTGGGTGGCCCTCATGCAAAAGACTGAGGTCCCCTGAGGAGGGAGTTGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CCA 72 bp GACAGCGCAGGACGTGGCACCATTACAACACCCACTTaGCAGGGGCGGAAGCCGCATAGGTCTCTGAGCCAC +
Preference number: 6 (lower is better)
Translates to: DSAGRGTITTPT*QGRKPHRSLSH
Trigger: GTGGCTCAGAGACCTATGCGGCTTCCGCCCCTGCCAAGTGGGTGTTGTAATGGTGCCACGTCCTGCGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS TCA 72 bp AGCCGGCACTGCGGCCACACTTCACACAGGAACCCATaGCAGCGCAGGACGTGGCACCATTACAACACCCAC +
Preference number: 6 (lower is better)
Translates to: SRHCGHTSHRNP*QRRTWHHYNTH
Trigger: GTGGGTGTTGTAATGGTGCCACGTCCTGCGCTGTCATGGGTTCCTGTGTGAAGTGTGGCCGCAGTGCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS GCA 72 bp ACAAGGATCAGATCCCCAGTCTGCCGGTCTGAACGCTaGATCACAAAGTGGCCGCGGCTGTTCCCACCCACG +
Preference number: 6 (lower is better)
Translates to: TRIRSPVCRSER*ITKWPRLFPPT
Trigger: CGTGGGTGGGAACAGCCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCAGACTGGGGATCTGATCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS GCA 72 bp CCCTCCAGGTTCTGCACAAGGATCAGATCCCCAGTCTaGCGGTCTGAACGCTGCATCACAAAGTGGCCGCGG +
Preference number: 6 (lower is better)
Translates to: PSRFCTRIRSPV*RSERCITKWPR
Trigger: CCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCAGACTGGGGATCTGATCCTTGTGCAGAACCTGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS TCA 72 bp GTTCTGCACAAGGATCAGATCCCCAGTCTGCCGGTCTaGACGCTGCATCACAAAGTGGCCGCGGCTGTTCCC +
Preference number: 6 (lower is better)
Translates to: VLHKDQIPSLPV*TLHHKVAAAVP
Trigger: GGGAACAGCCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCAGACTGGGGATCTGATCCTTGTGCAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS TCA 72 bp CACCCACTTGGCAGGGGCGGAAGCCGCATAGGTCTCTaGGCCACGGTGGCCTATCCAGGATTTAAAACCCAG +
Preference number: 6 (lower is better)
Translates to: HPLGRGGSRIGL*ATVAYPGFKTQ
Trigger: CTGGGTTTTAAATCCTGGATAGGCCACCGTGGCTCAGAGACCTATGCGGCTTCCGCCCCTGCCAAGTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS GCA 72 bp GTGTTGATGCATGTGGTCCCCTGGGGGCACACCGGCTaGAGGCCCACACATTCATCCACATCTCTACAGTGG +
Preference number: 6 (lower is better)
Translates to: VLMHVVPWGHTG*RPTHSSTSLQW
Trigger: CCACTGTAGAGATGTGGATGAATGTGTGGGCCTGCAGCCGGTGTGCCCCCAGGGGACCACATGCATCAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409667.7
CDS CCA 72 bp CTCCCCACAGCAGGATGTCCTCACCTAACCCCATGGTaGCTACATACCAGTCTGGGCCTGATGCTGACAGCG +
Preference number: 6 (lower is better)
Translates to: LPTAGCPHLTPW*LHTSLGLMLTA
Trigger: CGCTGTCAGCATCAGGCCCAGACTGGTATGTAGCCACCATGGGGTTAGGTGAGGACATCCTGCTGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS TCA 72 bp AGGTATTCCGACATGTCGACGTCCACCTCCAGCGTCTaGGGCCCCTCCAGGTTCTGCACAAGGATCAGATCC +
Preference number: 6 (lower is better)
Translates to: RYSDMSTSTSSV*GPSRFCTRIRS
Trigger: GGATCTGATCCTTGTGCAGAACCTGGAGGGGCCTCAGACGCTGGAGGTGGACGTCGACATGTCGGAATACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
CDS TCA 72 bp ATGCTCCTCCAGGGAACTGGAAAGGCATGGGCCAGCTaGTGGGAAGGAAGGTGTCAGGCTGAGGGACAAGGT +
Preference number: 6 (lower is better)
Translates to: MLLQGTGKAWAS*WEGRCQAEGQG
Trigger: ACCTTGTCCCTCAGCCTGACACCTTCCTTCCCATCAGCTGGCCCATGCCTTTCCAGTTCCCTGGAGGAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CCA 72 bp TTGAGTGGGGGACTGAGCTCCCTACATGTCTGCATTTaGGGACCTATGCCTAGGGTCCTCCTCTCCCCACAG +
Preference number: 6 (lower is better)
Translates to: LSGGLSSLHVCI*GPMPRVLLSPQ
Trigger: CTGTGGGGAGAGGAGGACCCTAGGCATAGGTCCCCAAATGCAGACATGTAGGGAGCTCAGTCCCCCACTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS TCA 72 bp AGGTATTCCGACATGTCGACGTCCACCTCCAGCGTCTaGGGCCCCTCCAGGTTAATGGAGACGTCTTCACGT +
Preference number: 6 (lower is better)
Translates to: RYSDMSTSTSSV*GPSRLMETSSR
Trigger: ACGTGAAGACGTCTCCATTAACCTGGAGGGGCCTCAGACGCTGGAGGTGGACGTCGACATGTCGGAATACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409903.5
CDS GCA 72 bp AGGAGCTTGGGGTCCACACACATGGCATCCAGCAGCTaGAATCCCCTCCTAGGTACACAAGCCGGGTATATG +
Preference number: 6 (lower is better)
Translates to: RSLGSTHMASSS*NPLLGTQAGYM
Trigger: CATATACCCGGCTTGTGTACCTAGGAGGGGATTGCAGCTGCTGGATGCCATGTGTGTGGACCCCAAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS GCA 72 bp GCTTGCTGCCCAGCTAACCTTTGTCCAGAGGCCATCTaGACCTGTGGATTGGGTTGTGCCTTTCACAGCCTC +
Preference number: 6 (lower is better)
Translates to: ACCPANLCPEAI*TCGLGCAFHSL
Trigger: GAGGCTGTGAAAGGCACAACCCAATCCACAGGTGCAGATGGCCTCTGGACAAAGGTTAGCTGGGCAGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS TCA 72 bp AAAGCAGTTCCAGGGACAGGAGCTGTAAGGGGCCTCTaGGCTCGGGAGGACAGCCTCATTTTGAGAAAGTGC +
Preference number: 6 (lower is better)
Translates to: KAVPGTGAVRGL*AREDSLILRKC
Trigger: GCACTTTCTCAAAATGAGGCTGTCCTCCCGAGCTCAGAGGCCCCTTACAGCTCCTGTCCCTGGAACTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS GCA 72 bp ACATCTTTGAGTGGGGGACTGAGCTCCCTACATGTCTaGATTTGGGGACCTATGCCTAGGGTCCTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: TSLSGGLSSLHV*IWGPMPRVLLS
Trigger: GGAGAGGAGGACCCTAGGCATAGGTCCCCAAATGCAGACATGTAGGGAGCTCAGTCCCCCACTCAAAGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CCA 72 bp GATACAAAGATGGTGACCTTGGACACGTGGTTGGCCTaGAAGGAGCGGTCCAGGTATTCCGACATGTCGACG +
Preference number: 6 (lower is better)
Translates to: DTKMVTLDTWLA*KERSRYSDMST
Trigger: CGTCGACATGTCGGAATACCTGGACCGCTCCTTCCAGGCCAACCACGTGTCCAAGGTCACCATCTTTGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272559.4
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
CDS CCA 72 bp CTGGGCCTGATGCTGACAGCGGTTCCCAGTCCTTCCTaGAGGACAAATGCATCTGTACTGGTTGACTCCTTC +
Preference number: 6 (lower is better)
Translates to: LGLMLTAVPSPS*RTNASVLVDSF
Trigger: GAAGGAGTCAACCAGTACAGATGCATTTGTCCTCCAGGAAGGACTGGGAACCGCTGTCAGCATCAGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409903.5
ENST00000441565.5
ENST00000472377.1
CDS TCA 72 bp AGGCTGAGGGACAAGGTGAGCAAGAGCCCAGATGCGTaGTGGCTGTTCATGGAGACTATGAGGATAGGAGCT +
Preference number: 6 (lower is better)
Translates to: RLRDKVSKSPDA*WLFMETMRIGA
Trigger: AGCTCCTATCCTCATAGTCTCCATGAACAGCCATCACGCATCTGGGCTCTTGCTCACCTTGTCCCTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS GCA 72 bp CATGGAGACTATGAGGATAGGAGCTGGCTTTGGATATaGCTGCTTGCTTCCCCTCCTTCCCATTCCTGGGGA +
Preference number: 6 (lower is better)
Translates to: HGDYEDRSWLWI*LLASPPSHSWG
Trigger: TCCCCAGGAATGGGAAGGAGGGGAAGCAAGCAGGCATATCCAAAGCCAGCTCCTATCCTCATAGTCTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS TCA 72 bp CCTTTCACAGCCTCGGTATTATCTTCAGCAAGTCTCTaGGGTCCCCAATGCCCAAGCCAAGCAAGGAGCTTG +
Preference number: 6 (lower is better)
Translates to: PFTASVLSSASL*GPQCPSQARSL
Trigger: CAAGCTCCTTGCTTGGCTTGGGCATTGGGGACCTCAGAGACTTGCTGAAGATAATACCGAGGCTGTGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS GCA 72 bp CTTAGAGAGGGGTGCACAGAGAACCTTCGTGAGTCCTaGCTCATTCATCCTCTCACTTCACAGCATCCCCTT +
Preference number: 6 (lower is better)
Translates to: LREGCTENLRES*LIHPLTSQHPL
Trigger: AAGGGGATGCTGTGAAGTGAGAGGATGAATGAGGCAGGACTCACGAAGGTTCTCTGTGCACCCCTCTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CCA 72 bp GTGATGGCTGTTCATGGAGACTATGAGGATAGGAGCTaGCTTTGGATATGCCTGCTTGCTTCCCCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: VMAVHGDYEDRS*LWICLLASPPS
Trigger: GGAAGGAGGGGAAGCAAGCAGGCATATCCAAAGCCAGCTCCTATCCTCATAGTCTCCATGAACAGCCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS TCA 72 bp TTACGAAAGCAAGTGAGGATGCAGGGAGGGGAGATGTaGCAGGACTGCCGTGGTACAGGAGAGGATAATTTC +
Preference number: 6 (lower is better)
Translates to: LRKQVRMQGGEM*QDCRGTGEDNF
Trigger: GAAATTATCCTCTCCTGTACCACGGCAGTCCTGTCACATCTCCCCTCCCTGCATCCTCACTTGCTTTCGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS GCA 72 bp CAGGACTGCCGTGGTACAGGAGAGGATAATTTCTGTTaGACCACTGCCAACCCACTCAGAAACACTTGGGAT +
Preference number: 6 (lower is better)
Translates to: QDCRGTGEDNFC*TTANPLRNTWD
Trigger: ATCCCAAGTGTTTCTGAGTGGGTTGGCAGTGGTGCAACAGAAATTATCCTCTCCTGTACCACGGCAGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS GCA 72 bp TTGTCCAGAGGCCATCTGCACCTGTGGATTGGGTTGTaGCTTTCACAGCCTCGGTATTATCTTCAGCAAGTC +
Preference number: 6 (lower is better)
Translates to: LSRGHLHLWIGL*LSQPRYYLQQV
Trigger: GACTTGCTGAAGATAATACCGAGGCTGTGAAAGGCACAACCCAATCCACAGGTGCAGATGGCCTCTGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CCA 72 bp CCAGGATGCTCAGGGTACTTTGAGTTTGAACCCTGCTaGCTGCCTGTAACTCTACATTTACACTCCATGCGC +
Preference number: 6 (lower is better)
Translates to: PGCSGYFEFEPC*LPVTLHLHSMR
Trigger: GCGCATGGAGTGTAAATGTAGAGTTACAGGCAGCCAGCAGGGTTCAAACTCAAAGTACCCTGAGCATCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CAA 72 bp CCTTTGTCCAGAGGCCATCTGCACCTGTGGATTGGGTaGTGCCTTTCACAGCCTCGGTATTATCTTCAGCAA +
Preference number: 6 (lower is better)
Translates to: PLSRGHLHLWIG*CLSQPRYYLQQ
Trigger: TTGCTGAAGATAATACCGAGGCTGTGAAAGGCACAACCCAATCCACAGGTGCAGATGGCCTCTGGACAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS TCA 72 bp AGCCGGAACCCAGGGTTGCAGGTAAAATGGACTTCGTaGTCCACTAAGTACTTGCTTCCAAACTTTCTGCCG +
Preference number: 6 (lower is better)
Translates to: SRNPGLQVKWTS*STKYLLPNFLP
Trigger: CGGCAGAAAGTTTGGAAGCAAGTACTTAGTGGATCACGAAGTCCATTTTACCTGCAACCCTGGGTTCCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331203.7
ENST00000409450.7
ENST00000409667.7
ENST00000409903.5
ENST00000472377.1
CDS TCA 72 bp TTTTTCCCTCTTGTTTGTAAACAAGGGGAGAGGCAGTaGGGTCTCCAAGAAAGCCCTGTCTCTGGCCTCAGT +
Preference number: 6 (lower is better)
Translates to: FFPLVCKQGERQ*GLQESPVSGLS
Trigger: ACTGAGGCCAGAGACAGGGCTTTCTTGGAGACCTCACTGCCTCTCCCCTTGTTTACAAACAAGAGGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CCA 72 bp ACAGAAAGAAGAATGAATGGTGATTACCAGGGGCTGTaGGGAGGGCAATGGGGAGTTGTCCTGTTATGGGTA +
Preference number: 6 (lower is better)
Translates to: TERRMNGDYQGL*GGQWGVVLLWV
Trigger: TACCCATAACAGGACAACTCCCCATTGCCCTCCCCACAGCCCCTGGTAATCACCATTCATTCTTCTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS GCA 72 bp TATAAATCCTCGACTACTCTTCATGCCAGAGACCTCTaGTCAGCACCCACATATATGAGGAGAGAAAGTGGG +
Preference number: 6 (lower is better)
Translates to: YKSSTTLHARDL*SAPTYMRRESG
Trigger: CCCACTTTCTCTCCTCATATATGTGGGTGCTGAGCAGAGGTCTCTGGCATGAAGAGTAGTCGAGGATTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CAA 72 bp GGGGAGTTGTCCTGTTATGGGTACAGAAGCTCAGTTTaGCAAGACAAAAAGAATTCTGGAGCTGGATGGTGG +
Preference number: 6 (lower is better)
Translates to: GELSCYGYRSSV*QDKKNSGAGWW
Trigger: CCACCATCCAGCTCCAGAATTCTTTTTGTCTTGCAAAACTGAGCTTCTGTACCCATAACAGGACAACTCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS GCA 72 bp AAGGAATGGCGTCAGTATGAGCCAAAGACAATCTCTTaGTCATCTTACCACCAAACTCACTTTCCCCATTTC +
Preference number: 6 (lower is better)
Translates to: KEWRQYEPKTIS*SSYHQTHFPHF
Trigger: GAAATGGGGAAAGTGAGTTTGGTGGTAAGATGAGCAAGAGATTGTCTTTGGCTCATACTGACGCCATTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS CCA 72 bp GTACAGAAGCTCAGTTTTGCAAGACAAAAAGAATTCTaGAGCTGGATGGTGGTGATGGTCGCACAACAATGT +
Preference number: 6 (lower is better)
Translates to: VQKLSFARQKEF*SWMVVMVAQQC
Trigger: ACATTGTTGTGCGACCATCACCACCATCCAGCTCCAGAATTCTTTTTGTCTTGCAAAACTGAGCTTCTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS TCA 72 bp TTGCAAGACAAAAAGAATTCTGGAGCTGGATGGTGGTaGTGGTCGCACAACAATGTGAATGTGATTAATGCC +
Preference number: 6 (lower is better)
Translates to: LQDKKNSGAGWW*WSHNNVNVINA
Trigger: GGCATTAATCACATTCACATTGTTGTGCGACCATCACCACCATCCAGCTCCAGAATTCTTTTTGTCTTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472377.1
CDS TCA 72 bp TTGATGGGAATCAAACACAAGTGGACAAATCCTGCATaGTTCTACTTAGATGAGGTCCCTAGAGCAGTCAGA +
Preference number: 6 (lower is better)
Translates to: LMGIKHKWTNPA*FYLDEVPRAVR
Trigger: TCTGACTGCTCTAGGGACCTCATCTAAGTAGAATCATGCAGGATTTGTCCACTTGTGTTTGATTCCCATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472377.1