RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134452

Ensembl transcript IDs: ENST00000362091.9, ENST00000379999.6, ENST00000397269.7, ENST00000460453.1, ENST00000461504.5, ENST00000462507.1, ENST00000469009.5, ENST00000470089.5, ENST00000470353.1, ENST00000475867.5, ENST00000479433.5, ENST00000481029.1, ENST00000485290.1, ENST00000489042.1, ENST00000494526.1, ENST00000496013.5

Found 575 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TACATCCAGAGGGGAGGCAAGTGGAGACTGGCTGTCTGTAGGGAGTaGAGAAATGGCAGGTCCAGCTTGGGCTGGTGTCCTCTTCCTCAG +
Preference number: 1 (lower is better)
Translates to: YIQRGGKWRLAVCRE*RNGRSSLGWCPLPQ
Trigger: CTGAGGAAGAGGACACCAGCCCAAGCTGGACCTGCCATTTCTCCACTCCCTACAGACAGCCAGTCTCCACTTGCCTCCCCTCTGGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
3UTR CCA 90 bp ACATCCCCCACTTCCCTGACCAGATACATCCAGAGGGGAGGCAAGTaGAGACTGGCTGTCTGTAGGGAGTGGAGAAATGGCAGGTCCAGC +
Preference number: 1 (lower is better)
Translates to: TSPTSLTRYIQRGGK*RLAVCREWRNGRSS
Trigger: GCTGGACCTGCCATTTCTCCACTCCCTACAGACAGCCAGTCTCCACTTGCCTCCCCTCTGGATGTATCTGGTCAGGGAAGTGGGGGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
3UTR CCA 90 bp CTGGCTGTCTGTAGGGAGTGGAGAAATGGCAGGTCCAGCTTGGGCTaGTGTCCTCTTCCTCAGAAAGTGCTGTGGGTGAACCCAGAGTCT +
Preference number: 1 (lower is better)
Translates to: LAVCREWRNGRSSLG*CPLPQKVLWVNPES
Trigger: AGACTCTGGGTTCACCCACAGCACTTTCTGAGGAAGAGGACACCAGCCCAAGCTGGACCTGCCATTTCTCCACTCCCTACAGACAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCGGGGCAGACCCTGGTaGGCCCGGCCCTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERARGRPW*ARPCTA
Trigger: GGCAGTGCAGGGCCGGGCTCACCAGGGTCTGCCCCG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGGGGCAGACCCTGGTaGGCCCGGCCCTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGERGRPW*ARPCTA
Trigger: GGCAGTGCAGGGCCGGGCTCACCAGGGTCTGCCCCG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCACGCCAGGGGCCCGATaGGCTGCTCCGCACAGGAGT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVTPGAR*AAPHRS
Trigger: ACTCCTGTGCGGAGCAGCGCATCGGGCCCCTGGCGT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCCACAGTGCGCTCCATaGCGCGCACCTGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENPQCAP*RAPAPG
Trigger: CCCCGGAGCAGGTGCGCGCCATGGAGCGCACTGTGG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCCAGGGCCCAGATGTTaGCACCCCCGGCAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENPGPRC*HPRQQR
Trigger: ACGCTGCTGCCGGGGGTGTCAACATCTGGGCCCTGG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCAGGGCCCAGATGTTaGCACCCCCGGCAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAPGPRC*HPRQQR
Trigger: ACGCTGCTGCCGGGGGTGTCAACATCTGGGCCCTGG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAGGGGCCCGATGCGCTaGTCCGCACAGGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENRGPMR*SAQEWQ
Trigger: CTGCCACTCCTGTGCGGAGCAGCGCATCGGGCCCCT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTCCATGGCGCGCACCTaGTCCGGGGAGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERASMART*SGEAVR
Trigger: CCTGACAGCCTCCCCGGAGCAGGTGCGCGCCATGGA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCACAGTGCGCTCCATaGCGCGCACCTGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEPQCAP*RAPAPG
Trigger: CCCCGGAGCAGGTGCGCGCCATGGAGCGCACTGTGG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAGCGAGCTCCTCCTCTaGCCGGGACCTGGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERASELLL*PGPGAR
Trigger: TCGGGCTCCAGGTCCCGGCCAGAGGAGGAGCTCGCT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAGGTCGGGGAGGTGTTaGCGCACACACGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENRSGRC*RTHASA
Trigger: GGCTGAGGCGTGTGTGCGGCAACACCTCCCCGACCT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAGGTCGGGGAGGTGTTaGCGCACACACGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERARSGRC*RTHASA
Trigger: GGCTGAGGCGTGTGTGCGGCAACACCTCCCCGACCT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAAGGGGCCCGATGCGCTaGTCCGCACAGGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGERGPMR*SAQEWQ
Trigger: CTGCCACTCCTGTGCGGAGCAGCGCATCGGGCCCCT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAACGCCAGGGGCCCGATaGGCTGCTCCGCACAGGAGT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGETPGAR*AAPHRS
Trigger: ACTCCTGTGCGGAGCAGCGCATCGGGCCCCTGGCGT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATCCATGGCGCGCACCTaGTCCGGGGAGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGESMART*SGEAVR
Trigger: CCTGACAGCCTCCCCGGAGCAGGTGCGCGCCATGGA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCTCGGCAAGCTGCTCTaGACTGCGGAGAACGTGCGC +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVLGKLL*TAENVR
Trigger: GCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACACCAAGACCGCTTCCTaGAGGGCGGGGCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENTKTAS*RAGQTL
Trigger: CAGGGTCTGCCCCGCCCTCCAGGAAGCGGTCTTGGT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCTGGCATGGTCACCGTaGAGCTGGGTCTCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENLAWSP*SWVSGG
Trigger: GCCTCCGGAGACCCAGCTCCACGGTGACCATGCCAG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCCTGCACTGCCTTCCTaGGGCAGTGCACAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENPALPS*GSAQLL
Trigger: GAGCAGCTGTGCACTGCCTCAGGAAGGCAGTGCAGG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTGCACTGCCTTCCTaGGGCAGTGCACAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAPALPS*GSAQLL
Trigger: GAGCAGCTGTGCACTGCCTCAGGAAGGCAGTGCAGG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGGTGCGCCTCTTCTGTaGACTCCCCCAGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENGAPLL*TPPASA
Trigger: TGCGGAAGCTGGGGGAGTGCACAGAAGAGGCGCACC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCTCGGCAAGCTGCTCTaGACTGCGGAGAACGTGCGC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERALGKLL*TAENVR
Trigger: GCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCTCGGCAAGCTGCTCTaGACTGCGGAGAACGTGCGC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENLGKLL*TAENVR
Trigger: GCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGGGTCCTCGGCAAGCTaGTCTGCACTGCGGAGAACG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAGSSAS*SALRRT
Trigger: CGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGGGTCCTCGGCAAGCTaGTCTGCACTGCGGAGAACG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENGSSAS*SALRRT
Trigger: CGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTTAAACCGTCTCATGTaGCGCTCCGGACCCGGACCC +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVLNRLM*RSGPGP
Trigger: GGGTCCGGGTCCGGAGCGCCACATGAGACGGTTTAA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362091.9
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAACCAAGACCGCTTCCTaGAGGGCGGGGCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGETKTAS*RAGQTL
Trigger: CAGGGTCTGCCCCGCCCTCCAGGAAGCGGTCTTGGT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTGGTCACCGTGGAGCTaGGTCTCCGGAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVWSPWS*VSGGRR
Trigger: TCTTCTGCCTCCGGAGACCCAGCTCCACGGTGACCA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTGGCATGGTCACCGTaGAGCTGGGTCTCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGELAWSP*SWVSGG
Trigger: GCCTCCGGAGACCCAGCTCCACGGTGACCATGCCAG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCTGAAGTGCGGAAGCTaGGGCAGGTTATGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVLKCGS*GRLCRA
Trigger: TGCCCGGCATAACCTGCCCCAGCTTCCGCACTTCAG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCATCTCCTGTGGAGATaGCCCAGGGGCCCTGCGCAA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENHLLWR*PRGPAQ
Trigger: TTGCGCAGGGCCCCTGGGCCATCTCCACAGGAGATG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379999.6
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCTCTGGCATCTCCTGTaGAGATGGCCCAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENLWHLL*RWPRGP
Trigger: AGGGCCCCTGGGCCATCTCCACAGGAGATGCCAGAG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379999.6
CDS-3UTR TCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTCACCCTCAGAGTCCTaGCAGCTGTCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVSPSES*QLSWPT
Trigger: TGTTGGCCAGGACAGCTGTCAGGACTCTGAGGGTGA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCAGTACAGGGTCTCGGTaGCATCTGGCATGGTCACCG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVSTGSR*HLAWSP
Trigger: CGGTGACCATGCCAGATGTCACCGAGACCCTGTACT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCATCCCCCACTTCCCTaGCCAGATACATCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVHPPLP*PDTSRG
Trigger: CCCTCTGGATGTATCTGGTCAGGGAAGTGGGGGATG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGGTGCGCCTCTTCTGTaGACTCCCCCAGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEGAPLL*TPPASA
Trigger: TGCGGAAGCTGGGGGAGTGCACAGAAGAGGCGCACC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCAGCTGGGGCAGGTTATaGCGGGCACAAGGCACTTTC +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVSWGRL*RAQGTF
Trigger: GAAAGTGCCTTGTGCCCGGCATAACCTGCCCCAGCT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCGATGTTCTCCACAGTaGGCTCCATGGCGCGCACCT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERARCSPQ*APWRAP
Trigger: AGGTGCGCGCCATGGAGCGCACTGTGGAGAACATCG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCGATGTTCTCCACAGTaGGCTCCATGGCGCGCACCT +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENRCSPQ*APWRAP
Trigger: AGGTGCGCGCCATGGAGCGCACTGTGGAGAACATCG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCAAGCTGCTCTGCACTaGGGAGAACGTGCGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVQAALH*GERAPC
Trigger: ACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGGGTCCTCGGCAAGCTaGTCTGCACTGCGGAGAACG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEGSSAS*SALRRT
Trigger: CGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTTAAACCGTCTCATGTaGCGCTCCGGACCCGGACCC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENLNRLM*RSGPGP
Trigger: GGGTCCGGGTCCGGAGCGCCACATGAGACGGTTTAA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362091.9
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTGGCTCAGTGCTTCCTaGCAGGGCAAGGTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVWLSAS*QGKVPR
Trigger: TCTTGGGACCTTGCCCTGCCAGGAAGCACTGAGCCA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGGCAGGCTGCAAATGTaGCTCAGTGCTTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVGRLQM*LSASWQ
Trigger: CTGCCAGGAAGCACTGAGCCACATTTGCAGCCTGCC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTGGTCACCGTGGAGCTaGGTCTCCGGAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAWSPWS*VSGGRR
Trigger: TCTTCTGCCTCCGGAGACCCAGCTCCACGGTGACCA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGGTCTCGGTGACATCTaGCATGGTCACCGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVGLGDI*HGHRGA
Trigger: AGCTCCACGGTGACCATGCCAGATGTCACCGAGACC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCTGAAGTGCGGAAGCTaGGGCAGGTTATGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENLKCGS*GRLCRA
Trigger: TGCCCGGCATAACCTGCCCCAGCTTCCGCACTTCAG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCAGAGGGGAGGCAAGTaGAGACTGGCTGTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVQRGGK*RLAVCR
Trigger: CCTACAGACAGCCAGTCTCCACTTGCCTCCCCTCTG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTGGGTCACAGCCAAGTaGCTCCGAGCCAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENWVTAK*LRAKCW
Trigger: CCAGCATTTGGCTCGGAGTCACTTGGCTGTGACCCA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTGGGTCACAGCCAAGTaGCTCCGAGCCAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAWVTAK*LRAKCW
Trigger: CCAGCATTTGGCTCGGAGTCACTTGGCTGTGACCCA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTCACCCTCAGAGTCCTaGCAGCTGTCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENSPSES*QLSWPT
Trigger: TGTTGGCCAGGACAGCTGTCAGGACTCTGAGGGTGA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAGTACAGGGTCTCGGTaGCATCTGGCATGGTCACCG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERASTGSR*HLAWSP
Trigger: CGGTGACCATGCCAGATGTCACCGAGACCCTGTACT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGATACTTGACCAGCGTTaGGGTCTTCCCAGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAILDQR*GLPSAG
Trigger: GCCGGCACTGGGAAGACCTCAACGCTGGTCAAGTAT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGGAAGGTTTTGCAGATaGCGTTGCTGGGGAAGACGC +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVGRFCR*RCWGRR
Trigger: GCGTCTTCCCCAGCAACGTCATCTGCAAAACCTTCC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCATCCCCCACTTCCCTaGCCAGATACATCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAHPPLP*PDTSRG
Trigger: CCCTCTGGATGTATCTGGTCAGGGAAGTGGGGGATG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTGGTGCACGGCTGCTTaGCTGCTAGGAAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVWCTAA*LLGRTQ
Trigger: CTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTGGCCATGTCATTGGTaGACGGCTGCTTGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVWPCHW*TAACLL
Trigger: TAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCAGACGTACTGTCCTCTaGTTCTTGCCTGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVRRTVL*FLPGLP
Trigger: AGGGAGGCCAGGCAAGAAGCAGAGGACAGTACGTCT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCAGGAAGGCAAACACGTaGCTCAGGACCTCACTAGGC +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVRKANT*LRTSLG
Trigger: GCCTAGTGAGGTCCTGAGGCACGTGTTTGCCTTCCT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCAGGCCAGCGAAGGCTTaGTCAGCTGCCAGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVRPAKA*SAARVS
Trigger: TGAAACTCTGGCAGCTGAGCAAGCCTTCGCTGGCCT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGGCCACTTGCCCCTTTaGGTCACCTCTAATGCCACT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVGHLPL*VTSNAT
Trigger: AGTGGCATTAGAGGTGACGCAAAGGGGCAAGTGGCC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAGCTGGGGCAGGTTATaGCGGGCACAAGGCACTTTC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERASWGRL*RAQGTF
Trigger: GAAAGTGCCTTGTGCCCGGCATAACCTGCCCCAGCT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCAGGGATGGCATTGTTaGACTGTCCCACGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAQGWHC*TVPRSS
Trigger: GCTGCTGCGTGGGACAGTGCAACAATGCCATCCCTG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGATGTTCTCCACAGTaGGCTCCATGGCGCGCACCT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGERCSPQ*APWRAP
Trigger: AGGTGCGCGCCATGGAGCGCACTGTGGAGAACATCG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAAGAGCAGGGCCTCATaGCGGGGCAGTACGATGTTC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENKSRAS*RGSTMF
Trigger: GAACATCGTACTGCCCCGGCATGAGGCCCTGCTCTT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAAGAGCAGGGCCTCATaGCGGGGCAGTACGATGTTC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAKSRAS*RGSTMF
Trigger: GAACATCGTACTGCCCCGGCATGAGGCCCTGCTCTT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCAAGCTGCTCTGCACTaGGGAGAACGTGCGCCTTGT +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENQAALH*GERAPC
Trigger: ACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCAAGCTGCTCTGCACTaGGGAGAACGTGCGCCTTGT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAQAALH*GERAPC
Trigger: ACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCCTAGGCCTTGTGCATaGCACAGACAAATGGTGCCG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVPRPCA*HRQMVP
Trigger: CGGCACCATTTGTCTGTGCCATGCACAAGGCCTAGG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCACGTCCCCAGCATCTTaGTCGGTTTCACCAGACTCC +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVTSPAS*SVSPDS
Trigger: GGAGTCTGGTGAAACCGACCAAGATGCTGGGGACGT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTGGCTCAGTGCTTCCTaGCAGGGCAAGGTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAWLSAS*QGKVPR
Trigger: TCTTGGGACCTTGCCCTGCCAGGAAGCACTGAGCCA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTGGCTCAGTGCTTCCTaGCAGGGCAAGGTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENWLSAS*QGKVPR
Trigger: TCTTGGGACCTTGCCCTGCCAGGAAGCACTGAGCCA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTGTCATTCACACTGCTaGAGAGGAGCACCACAGCCG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVCHSHC*RGAPQP
Trigger: CGGCTGTGGTGCTCCTCTCCAGCAGTGTGAATGACA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATGGTCACCGTGGAGCTaGGTCTCCGGAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEWSPWS*VSGGRR
Trigger: TCTTCTGCCTCCGGAGACCCAGCTCCACGGTGACCA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGGTCTCGGTGACATCTaGCATGGTCACCGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAGLGDI*HGHRGA
Trigger: AGCTCCACGGTGACCATGCCAGATGTCACCGAGACC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGCTGGTGTGCAGTCCTaGGCCTCATCCACAAAGATG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVAGVQS*ASSTKM
Trigger: CATCTTTGTGGATGAGGCCCAGGACTGCACACCAGC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCAAACACGTTGGCGTTaGTCCGGGACAACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVQTRWR*SGTTRP
Trigger: TGGCCTTGTTGTCCCGGACCAACGCCAACGTGTTTG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGATGGCAGGTCCAGCTTaGGCTGGTGTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAMAGPA*AGVLFL
Trigger: GAGGAAGAGGACACCAGCCCAAGCTGGACCTGCCAT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGCTGTCTGTAGGGAGTaGAGAAATGGCAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVAVCRE*RNGRSS
Trigger: GCTGGACCTGCCATTTCTCCACTCCCTACAGACAGC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCAGAGGGGAGGCAAGTaGAGACTGGCTGTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENQRGGK*RLAVCR
Trigger: CCTACAGACAGCCAGTCTCCACTTGCCTCCCCTCTG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTGGGCACTCGTCCTCTaGCATCTCCTGTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENWALVL*HLLWRW
Trigger: CCATCTCCACAGGAGATGCCAGAGGACGAGTGCCCA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379999.6
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATGGGTCACAGCCAAGTaGCTCCGAGCCAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEWVTAK*LRAKCW
Trigger: CCAGCATTTGGCTCGGAGTCACTTGGCTGTGACCCA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAAGTACAGGGTCTCGGTaGCATCTGGCATGGTCACCG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGESTGSR*HLAWSP
Trigger: CGGTGACCATGCCAGATGTCACCGAGACCCTGTACT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGGAAGGTTTTGCAGATaGCGTTGCTGGGGAAGACGC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENGRFCR*RCWGRR
Trigger: GCGTCTTCCCCAGCAACGTCATCTGCAAAACCTTCC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAGAAAGTGCTGTGGGTaGACCCAGAGTCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENRKCCG*TQSLRE
Trigger: CTCCCTGAGACTCTGGGTTCACCCACAGCACTTTCT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAGAAAGTGCTGTGGGTaGACCCAGAGTCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERARKCCG*TQSLRE
Trigger: CTCCCTGAGACTCTGGGTTCACCCACAGCACTTTCT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACATCCCCCACTTCCCTaGCCAGATACATCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEHPPLP*PDTSRG
Trigger: CCCTCTGGATGTATCTGGTCAGGGAAGTGGGGGATG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGCCCAGAATGTACTCTaGGGTTGGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENAQNVL*GWEFET
Trigger: GGTCTCGAACTCCCAACCTCAGAGTACATTCTGGGC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTGGTGCACGGCTGCTTaGCTGCTAGGAAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAWCTAA*LLGRTQ
Trigger: CTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTCATTGGTGCACGGCTaGTTGCCTGCTAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVSLVHG*LPARKN
Trigger: GTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAATGA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTGGCCATGTCATTGGTaGACGGCTGCTTGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENWPCHW*TAACLL
Trigger: TAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGAGGCAGTGCACAGCTaGTCTCTGCAGGAAAGATCA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVEAVHS*SLQERS
Trigger: TGATCTTTCCTGCAGAGAGCAGCTGTGCACTGCCTC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAGACGTACTGTCCTCTaGTTCTTGCCTGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERARRTVL*FLPGLP
Trigger: AGGGAGGCCAGGCAAGAAGCAGAGGACAGTACGTCT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGCAAATGTGGCTCAGTaGTTCCTGGCAGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENANVAQ*FLAGQG
Trigger: ACCTTGCCCTGCCAGGAAGCACTGAGCCACATTTGC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAGGAAGGCAAACACGTaGCTCAGGACCTCACTAGGC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERARKANT*LRTSLG
Trigger: GCCTAGTGAGGTCCTGAGGCACGTGTTTGCCTTCCT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCAAGACGCGTTCGGCCTaGTTTGCGATGCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVKTRSA*FAMLLL
Trigger: CAACAAGAGCATCGCAAAGCAGGCCGAACGCGTCTT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAGGCCAGCGAAGGCTTaGTCAGCTGCCAGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENRPAKA*SAARVS
Trigger: TGAAACTCTGGCAGCTGAGCAAGCCTTCGCTGGCCT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGGCCACTTGCCCCTTTaGGTCACCTCTAATGCCACT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAGHLPL*VTSNAT
Trigger: AGTGGCATTAGAGGTGACGCAAAGGGGCAAGTGGCC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGACAACAAGGCCACTTaGCCCTTTGCGTCACCTCTA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVDNKAT*PFASPL
Trigger: TAGAGGTGACGCAAAGGGGCAAGTGGCCTTGTTGTC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGACTCAACTCTGAAGTaGGGAAGCTGGGGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVDSTLK*GSWGRL
Trigger: TAACCTGCCCCAGCTTCCGCACTTCAGAGTTGAGTC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAGGGATGGCATTGTTaGACTGTCCCACGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEQGWHC*TVPRSS
Trigger: GCTGCTGCGTGGGACAGTGCAACAATGCCATCCCTG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAAAGAGCAGGGCCTCATaGCGGGGCAGTACGATGTTC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEKSRAS*RGSTMF
Trigger: GAACATCGTACTGCCCCGGCATGAGGCCCTGCTCTT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCTGGTCCCGGTAGCCTaGTTACTCTCTTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENLVPVA*LLSSSE
Trigger: CTCTGAGGAAGAGAGTAACCAGGCTACCGGGACCAG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCCTAGGCCTTGTGCATaGCACAGACAAATGGTGCCG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENPRPCA*HRQMVP
Trigger: CGGCACCATTTGTCTGTGCCATGCACAAGGCCTAGG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTAGGCCTTGTGCATaGCACAGACAAATGGTGCCG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAPRPCA*HRQMVP
Trigger: CGGCACCATTTGTCTGTGCCATGCACAAGGCCTAGG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGGCAGGCTGCAAATGTaGCTCAGTGCTTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEGRLQM*LSASWQ
Trigger: CTGCCAGGAAGCACTGAGCCACATTTGCAGCCTGCC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCATCTCCCTCCACAAGTaGCACACCAAGCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVISLHK*HTKLRF
Trigger: GAACCTGAGCTTGGTGTGCCACTTGTGGAGGGAGAT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGGTCTCGGTGACATCTaGCATGGTCACCGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEGLGDI*HGHRGA
Trigger: AGCTCCACGGTGACCATGCCAGATGTCACCGAGACC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGATGGTTTTCTTGCCTaGCCAGACAGATGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVDGFLA*PDRWLL
Trigger: GAGGAGCCATCTGTCTGGCCAGGCAAGAAAACCATC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCCTCATCCACAAAGATaGCGTCAAAAGAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVPHPQR*RQKRPA
Trigger: CGCTGGCCTCTTTTGACGCCATCTTTGTGGATGAGG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGCTGGTGTGCAGTCCTaGGCCTCATCCACAAAGATG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAAGVQS*ASSTKM
Trigger: CATCTTTGTGGATGAGGCCCAGGACTGCACACCAGC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCAAACACGTTGGCGTTaGTCCGGGACAACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENQTRWR*SGTTRP
Trigger: TGGCCTTGTTGTCCCGGACCAACGCCAACGTGTTTG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCCTCATCAAACACGTTaGCGTTGGTCCGGGACAACA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVPHQTR*RWSGTT
Trigger: TGTTGTCCCGGACCAACGCCAACGTGTTTGATGAGG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCAAACTCCAGGCCTTTaGCTTTGTGCACAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVQTPGL*LCAQCP
Trigger: TGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCAGGTCCAGCTTGGGCTaGTGTCCTCTTCCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVRSSLG*CPLPQK
Trigger: TTTCTGAGGAAGAGGACACCAGCCCAAGCTGGACCT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAATGGCAGGTCCAGCTTaGGCTGGTGTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEMAGPA*AGVLFL
Trigger: GAGGAAGAGGACACCAGCCCAAGCTGGACCTGCCAT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGCTGTCTGTAGGGAGTaGAGAAATGGCAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENAVCRE*RNGRSS
Trigger: GCTGGACCTGCCATTTCTCCACTCCCTACAGACAGC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGAGGCAAGTGGAGACTaGCTGTCTGTAGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAEASGD*LSVGSG
Trigger: TCCACTCCCTACAGACAGCCAGTCTCCACTTGCCTC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAGAGGGGAGGCAAGTaGAGACTGGCTGTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEQRGGK*RLAVCR
Trigger: CCTACAGACAGCCAGTCTCCACTTGCCTCCCCTCTG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGTGAAGACCAGCAAGTaGGCACTCGTCCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAVKTSK*ALVLWH
Trigger: ATGCCAGAGGACGAGTGCCCACTTGCTGGTCTTCAC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379999.6
CDS-3UTR TCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTGGCTGTGTATCGTATaGGGTTCAGCACACACAGGT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVWLCIV*GSAHTG
Trigger: ACCTGTGTGTGCTGAACCTCATACGATACACAGCCA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCACCAAATAGGCACGTaGTCAATGGTCAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVHQIGT*SMVSSS
Trigger: CGAAGAGCTGACCATTGATCACGTGCCTATTTGGTG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCACTCTGCTCAACCATaGCTCTCTGTCCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAHSAQP*LSVLGC
Trigger: ACAGCCAAGGACAGAGAGTCATGGTTGAGCAGAGTG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTCCTGTTGCTATAGGTaGTGGGCAGCTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVSCCYR*WAASSW
Trigger: CCATGAAGAAGCTGCCCATCACCTATAGCAACAGGA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAAGAAAGTGCTGTGGGTaGACCCAGAGTCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGERKCCG*TQSLRE
Trigger: CTCCCTGAGACTCTGGGTTCACCCACAGCACTTTCT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACATGACTCAGGCACTTaGCAGGTCCAATGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEHDSGT*QVQWQP
Trigger: AGGCTGCCATTGGACCTGTCAAGTGCCTGAGTCATG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379999.6
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATGGCCATGTCATTGGTaGACGGCTGCTTGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEWPCHW*TAACLL
Trigger: TAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTGCACAGCTGCTCTCTaGAGGAAAGATCATGTCACC +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVCTAAL*RKDHVT
Trigger: GGTGACATGATCTTTCCTGCAGAGAGCAGCTGTGCA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGCAAATGTGGCTCAGTaGTTCCTGGCAGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEANVAQ*FLAGQG
Trigger: ACCTTGCCCTGCCAGGAAGCACTGAGCCACATTTGC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGGATGTCATTCACACTaGTGGAGAGGAGCACCACAG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENGCHSH*WRGAPQ
Trigger: CTGTGGTGCTCCTCTCCAGCAGTGTGAATGACATCC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGGATGTCATTCACACTaGTGGAGAGGAGCACCACAG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAGCHSH*WRGAPQ
Trigger: CTGTGGTGCTCCTCTCCAGCAGTGTGAATGACATCC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGCGTTCGGCCTGCTTTaGGATGCTCTTGTTGAATGT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVAFGLL*DALVEC
Trigger: ACATTCAACAAGAGCATCGCAAAGCAGGCCGAACGC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAAGACGCGTTCGGCCTaGTTTGCGATGCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAKTRSA*FAMLLL
Trigger: CAACAAGAGCATCGCAAAGCAGGCCGAACGCGTCTT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAAGACGCGTTCGGCCTaGTTTGCGATGCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENKTRSA*FAMLLL
Trigger: CAACAAGAGCATCGCAAAGCAGGCCGAACGCGTCTT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAAGGCCAGCGAAGGCTTaGTCAGCTGCCAGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGERPAKA*SAARVS
Trigger: TGAAACTCTGGCAGCTGAGCAAGCCTTCGCTGGCCT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCTCCGAGCCAAATGCTaGCAGTCAATGGCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVLRAKC*QSMAVR
Trigger: TCTTACTGCCATTGACTGCCAGCATTTGGCTCGGAG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTTTTGGCCATGTCATTaGTGCACGGCTGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENFWPCH*CTAACL
Trigger: CAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTGGTCCCGGTAGCCTaGTTACTCTCTTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGELVPVA*LLSSSE
Trigger: CTCTGAGGAAGAGAGTAACCAGGCTACCGGGACCAG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAGTATGAGTCAGGAATaGGATCAGGACCCACGTCCC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERASMSQE*DQDPRP
Trigger: GGGACGTGGGTCCTGATCCCATTCCTGACTCATACT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAGTATGAGTCAGGAATaGGATCAGGACCCACGTCCC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENSMSQE*DQDPRP
Trigger: GGGACGTGGGTCCTGATCCCATTCCTGACTCATACT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGATCTCCCTCCACAAGTaGCACACCAAGCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAISLHK*HTKLRF
Trigger: GAACCTGAGCTTGGTGTGCCACTTGTGGAGGGAGAT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATGTCATTCACACTGCTaGAGAGGAGCACCACAGCCG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGECHSHC*RGAPQP
Trigger: CGGCTGTGGTGCTCCTCTCCAGCAGTGTGAATGACA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGATGGTTTTCTTGCCTaGCCAGACAGATGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERADGFLA*PDRWLL
Trigger: GAGGAGCCATCTGTCTGGCCAGGCAAGAAAACCATC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTGTGCCCGTAGGCCATaGAGTGGAAGGTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENCARRP*SGRFCR
Trigger: TCTGCAAAACCTTCCACTCCATGGCCTACGGGCACA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTGTGCCCGTAGGCCATaGAGTGGAAGGTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERACARRP*SGRFCR
Trigger: TCTGCAAAACCTTCCACTCCATGGCCTACGGGCACA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTCATCCACAAAGATaGCGTCAAAAGAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAPHPQR*RQKRPA
Trigger: CGCTGGCCTCTTTTGACGCCATCTTTGTGGATGAGG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGCTGGTGTGCAGTCCTaGGCCTCATCCACAAAGATG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEAGVQS*ASSTKM
Trigger: CATCTTTGTGGATGAGGCCCAGGACTGCACACCAGC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAAACACGTTGGCGTTaGTCCGGGACAACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEQTRWR*SGTTRP
Trigger: TGGCCTTGTTGTCCCGGACCAACGCCAACGTGTTTG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTCATCAAACACGTTaGCGTTGGTCCGGGACAACA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAPHQTR*RWSGTT
Trigger: TGTTGTCCCGGACCAACGCCAACGTGTTTGATGAGG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCAAACTCCAGGCCTTTaGCTTTGTGCACAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAQTPGL*LCAQCP
Trigger: TGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCGGTGTCAACAGGGATaGCATTGTTGCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERARCQQG*HCCTVP
Trigger: TGGGACAGTGCAACAATGCCATCCCTGTTGACACCG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCCTCAGAAAGTGCTGTaGGTGAACCCAGAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENPQKVL*VNPESQ
Trigger: CTGAGACTCTGGGTTCACCCACAGCACTTTCTGAGG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTCAGAAAGTGCTGTaGGTGAACCCAGAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAPQKVL*VNPESQ
Trigger: CTGAGACTCTGGGTTCACCCACAGCACTTTCTGAGG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAGGTCCAGCTTGGGCTaGTGTCCTCTTCCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERARSSLG*CPLPQK
Trigger: TTTCTGAGGAAGAGGACACCAGCCCAAGCTGGACCT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGCTGTCTGTAGGGAGTaGAGAAATGGCAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEAVCRE*RNGRSS
Trigger: GCTGGACCTGCCATTTCTCCACTCCCTACAGACAGC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGAGGCAAGTGGAGACTaGCTGTCTGTAGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEEASGD*LSVGSG
Trigger: TCCACTCCCTACAGACAGCCAGTCTCCACTTGCCTC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCAAGAAGCCCATAGTATaGGTCAGGAATGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVKKPIV*VRNGIR
Trigger: CCTGATCCCATTCCTGACTCATACTATGGGCTTCTT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTGCCGTCCACTTTGCTaGCAGCTTGCTCTTCATTCA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENCRPLC*QLALHS
Trigger: TGAATGAAGAGCAAGCTGTCAGCAAAGTGGACGGCA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTGCCGTCCACTTTGCTaGCAGCTTGCTCTTCATTCA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERACRPLC*QLALHS
Trigger: TGAATGAAGAGCAAGCTGTCAGCAAAGTGGACGGCA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCAGCACACACAGGTCTaGCTCCTTTTCTATGCCACA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENQHTQV*LLFYAT
Trigger: TGTGGCATAGAAAAGGAGTCAGACCTGTGTGTGCTG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCAGCACACACAGGTCTaGCTCCTTTTCTATGCCACA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAQHTQV*LLFYAT
Trigger: TGTGGCATAGAAAAGGAGTCAGACCTGTGTGTGCTG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTGGCTGTGTATCGTATaGGGTTCAGCACACACAGGT +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENWLCIV*GSAHTG
Trigger: ACCTGTGTGTGCTGAACCTCATACGATACACAGCCA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGACTTCTCTGCATACTTaGCCAGCGTTGAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERATSLHT*PALRSS
Trigger: GGAAGACCTCAACGCTGGTCAAGTATGCAGAGAAGT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACACTTCTCTGCATACTTaGCCAGCGTTGAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENTSLHT*PALRSS
Trigger: GGAAGACCTCAACGCTGGTCAAGTATGCAGAGAAGT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCAAGCTTGGCTCTTATaGATCCACCCTTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAQAWLL*IHPSLQ
Trigger: CTGAAGGGAAGGGTGGATTCATAAGAGCCAAGCTTG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCAAGCTTGGCTCTTATaGATCCACCCTTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENQAWLL*IHPSLQ
Trigger: CTGAAGGGAAGGGTGGATTCATAAGAGCCAAGCTTG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCACCAAATAGGCACGTaGTCAATGGTCAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAHQIGT*SMVSSS
Trigger: CGAAGAGCTGACCATTGATCACGTGCCTATTTGGTG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACACTCTGCTCAACCATaGCTCTCTGTCCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEHSAQP*LSVLGC
Trigger: ACAGCCAAGGACAGAGAGTCATGGTTGAGCAGAGTG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACACCGAAAACTCTGCGTaGGATAGAAGACGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENTENSA*DRRRGC
Trigger: ACACCCACGTCTTCTATCTCACGCAGAGTTTTCGGT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGACCGAAAACTCTGCGTaGGATAGAAGACGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERATENSA*DRRRGC
Trigger: ACACCCACGTCTTCTATCTCACGCAGAGTTTTCGGT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAAAATGACTCAACTCTaGAGTGCGGAAGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAKMTQL*SAEAGA
Trigger: TGCCCCAGCTTCCGCACTTCAGAGTTGAGTCATTTT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGGAAGAACTCAGGGATaGATCTTTGACTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVGRTQG*IFDFPD
Trigger: GTCAGGGAAGTCAAAGATGCATCCCTGAGTTCTTCC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATCATTGGTGCACGGCTaGTTGCCTGCTAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGESLVHG*LPARKN
Trigger: GTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAATGA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTGCACAGCTGCTCTCTaGAGGAAAGATCATGTCACC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERACTAAL*RKDHVT
Trigger: GGTGACATGATCTTTCCTGCAGAGAGCAGCTGTGCA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTGCACAGCTGCTCTCTaGAGGAAAGATCATGTCACC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENCTAAL*RKDHVT
Trigger: GGTGACATGATCTTTCCTGCAGAGAGCAGCTGTGCA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGAGGCAGTGCACAGCTaGTCTCTGCAGGAAAGATCA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEEAVHS*SLQERS
Trigger: TGATCTTTCCTGCAGAGAGCAGCTGTGCACTGCCTC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTTGGATGGTTTTCTTaGCTGGCCAGACAGATGGCT +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENVGWFS*LARQMA
Trigger: AGCCATCTGTCTGGCCAGGCAAGAAAACCATCCAAC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGTTGGATGGTTTTCTTaGCTGGCCAGACAGATGGCT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAVGWFS*LARQMA
Trigger: AGCCATCTGTCTGGCCAGGCAAGAAAACCATCCAAC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGCGTTCGGCCTGCTTTaGGATGCTCTTGTTGAATGT +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENAFGLL*DALVEC
Trigger: ACATTCAACAAGAGCATCGCAAAGCAGGCCGAACGC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGACAACAAGGCCACTTaGCCCTTTGCGTCACCTCTA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEDNKAT*PFASPL
Trigger: TAGAGGTGACGCAAAGGGGCAAGTGGCCTTGTTGTC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTGGCTTTGTGCACAGTaGCCAGAATGTACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVWLCAQ*PECTLQ
Trigger: TTGCAGAGTACATTCTGGGCACTGTGCACAAAGCCA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362091.9
ENST00000379999.6
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGACTCAACTCTGAAGTaGGGAAGCTGGGGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEDSTLK*GSWGRL
Trigger: TAACCTGCCCCAGCTTCCGCACTTCAGAGTTGAGTC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTTGCTTGTCAGCTCTaGTTGCAAGAAGTACTCCCC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENVACQL*LQEVLP
Trigger: GGGGAGTACTTCTTGCAAGCAGAGCTGACAAGCAAC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTGGCTTTGTGCACAGTaGCCAGAATGTACTCTGAGG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAWLCAQ*PECTLR
Trigger: CCTCAGAGTACATTCTGGGCACTGTGCACAAAGCCA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCTCCGAGCCAAATGCTaGCAGTCAATGGCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERALRAKC*QSMAVR
Trigger: TCTTACTGCCATTGACTGCCAGCATTTGGCTCGGAG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCATGGCACAGACAAATaGTGCCGTGGAGCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVHGTDK*CRGAFL
Trigger: TAAGAAAGCTCCACGGCACCATTTGTCTGTGCCATG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAATCTCCCTCCACAAGTaGCACACCAAGCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEISLHK*HTKLRF
Trigger: GAACCTGAGCTTGGTGTGCCACTTGTGGAGGGAGAT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGCCTGGCCAGACAGATaGCTCCTCTTTAACTTTTGT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVAWPDR*LLFNFC
Trigger: ACAAAAGTTAAAGAGGAGCCATCTGTCTGGCCAGGC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATGTGCCCGTAGGCCATaGAGTGGAAGGTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGECARRP*SGRFCR
Trigger: TCTGCAAAACCTTCCACTCCATGGCCTACGGGCACA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTATGTTCATGATAGCTaGTGTGCAGTCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAYVHDS*CAVLGL
Trigger: GAGGCCCAGGACTGCACACCAGCTATCATGAACATA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTATGTTCATGATAGCTaGTGTGCAGTCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENYVHDS*CAVLGL
Trigger: GAGGCCCAGGACTGCACACCAGCTATCATGAACATA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCTCATCAAACACGTTaGCGTTGGTCCGGGACAACA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEPHQTR*RWSGTT
Trigger: TGTTGTCCCGGACCAACGCCAACGTGTTTGATGAGG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCAACAACTGCGATCTTaGCTTCAAGCTCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVQQLRS*LQAPCP
Trigger: AGGACAAGGAGCTTGAAGCCAAGATCGCAGTTGTTG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAAACTCCAGGCCTTTaGCTTTGTGCACAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEQTPGL*LCAQCP
Trigger: TGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAGCACACACAGGTCTaGCTCCTTTTCTATGCCACA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEQHTQV*LLFYAT
Trigger: TGTGGCATAGAAAAGGAGTCAGACCTGTGTGTGCTG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATGGCTGTGTATCGTATaGGGTTCAGCACACACAGGT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEWLCIV*GSAHTG
Trigger: ACCTGTGTGTGCTGAACCTCATACGATACACAGCCA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTACAGAAACCTGCTCTaGGACCACTTCTCTGCATAC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENYRNLL*DHFSAY
Trigger: GTATGCAGAGAAGTGGTCTCAGAGCAGGTTTCTGTA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTACAGAAACCTGCTCTaGGACCACTTCTCTGCATAC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAYRNLL*DHFSAY
Trigger: GTATGCAGAGAAGTGGTCTCAGAGCAGGTTTCTGTA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCCTCTAATGCCACTCTaGTGGTTTCCTCCAACCAAA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENPLMPL*WFPPTK
Trigger: TTTGGTTGGAGGAAACCATCAGAGTGGCATTAGAGG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAAAAATGACTCAACTCTaGAGTGCGGAAGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEKMTQL*SAEAGA
Trigger: TGCCCCAGCTTCCGCACTTCAGAGTTGAGTCATTTT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATCCTGTTGCTATAGGTaGTGGGCAGCTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGESCCYR*WAASSW
Trigger: CCATGAAGAAGCTGCCCATCACCTATAGCAACAGGA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGGAAGAACTCAGGGATaGATCTTTGACTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAGRTQG*IFDFPD
Trigger: GTCAGGGAAGTCAAAGATGCATCCCTGAGTTCTTCC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGGCACAGACAAATGGTaGCGTGGAGCTTTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAGTDKW*RGAFLE
Trigger: TTCTAAGAAAGCTCCACGGCACCATTTGTCTGTGCC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGGCACAGACAAATGGTaGCGTGGAGCTTTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENGTDKW*RGAFLE
Trigger: TTCTAAGAAAGCTCCACGGCACCATTTGTCTGTGCC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGCGTTCGGCCTGCTTTaGGATGCTCTTGTTGAATGT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEAFGLL*DALVEC
Trigger: ACATTCAACAAGAGCATCGCAAAGCAGGCCGAACGC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTGGCTTTGTGCACAGTaGCCAGAATGTACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAWLCAQ*PECTLQ
Trigger: TTGCAGAGTACATTCTGGGCACTGTGCACAAAGCCA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362091.9
ENST00000379999.6
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGTTGCTTGTCAGCTCTaGTTGCAAGAAGTACTCCCC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEVACQL*LQEVLP
Trigger: GGGGAGTACTTCTTGCAAGCAGAGCTGACAAGCAAC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTCTCATTTCAGCGTaGTCTGTGAAGACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGERLISA*SVKTSK
Trigger: CTTGCTGGTCTTCACAGAGCACGCTGAAATGAGACG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379999.6
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCAACAGAATTGCTTTTaGCCATGTCATTGGTGCACG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVQQNCF*PCHWCT
Trigger: CGTGCACCAATGACATGGCCAAAAGCAATTCTGTTG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCATGGCACAGACAAATaGTGCCGTGGAGCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENHGTDK*CRGAFL
Trigger: TAAGAAAGCTCCACGGCACCATTTGTCTGTGCCATG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGCCTGGCCAGACAGATaGCTCCTCTTTAACTTTTGT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAAWPDR*LLFNFC
Trigger: ACAAAAGTTAAAGAGGAGCCATCTGTCTGGCCAGGC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATATGTTCATGATAGCTaGTGTGCAGTCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEYVHDS*CAVLGL
Trigger: GAGGCCCAGGACTGCACACCAGCTATCATGAACATA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCAACAACTGCGATCTTaGCTTCAAGCTCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENQQLRS*LQAPCP
Trigger: AGGACAAGGAGCTTGAAGCCAAGATCGCAGTTGTTG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCAGAGGTTCCATCTTGTaGTTCAGAATCAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVRGSIL*FRISCC
Trigger: ACAACAGCTGATTCTGAATCACAAGATGGAACCTCT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCATTCAACTTCTTCTTTaGCTGGTACTTCCGCCCTAT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVIQLLL*LVLPPY
Trigger: ATAGGGCGGAAGTACCAGTCAAAGAAGAAGTTGAAT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCATTTTCCCACATGGCTaGGACAGAACTATGTTCATG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVIFPHG*DRTMFM
Trigger: CATGAACATAGTTCTGTCTCAGCCATGTGGGAAAAT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCTCTAATGCCACTCTaGTGGTTTCCTCCAACCAAA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEPLMPL*WFPPTK
Trigger: TTTGGTTGGAGGAAACCATCAGAGTGGCATTAGAGG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCGTTCTTCCTCTGGCTaGAGAAGGATCCAAATATCA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERARSSSG*RRIQIS
Trigger: TGATATTTGGATCCTTCTTCAGCCAGAGGAAGAACG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTTCATCCTCAGAAAATaGCTCAACTCTGAAGTGCGG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAFILRK*LNSEVR
Trigger: CCGCACTTCAGAGTTGAGTCATTTTCTGAGGATGAA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTTCATCCTCAGAAAATaGCTCAACTCTGAAGTGCGG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENFILRK*LNSEVR
Trigger: CCGCACTTCAGAGTTGAGTCATTTTCTGAGGATGAA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGTGCACTTCCTACTGTaGCATTCTTCACTCTGTATC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAVHFLL*HSSLCI
Trigger: GATACAGAGTGAAGAATGTCACAGTAGGAAGTGCAC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379999.6
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTCAATGGCAGTAAGATaGTTCCGCTTAAACCGTCTC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENSMAVR*FRLNRL
Trigger: GAGACGGTTTAAGCGGAAGCATCTTACTGCCATTGA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGGAAGAACTCAGGGATaGATCTTTGACTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEGRTQG*IFDFPD
Trigger: GTCAGGGAAGTCAAAGATGCATCCCTGAGTTCTTCC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGGCACAGACAAATGGTaGCGTGGAGCTTTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEGTDKW*RGAFLE
Trigger: TTCTAAGAAAGCTCCACGGCACCATTTGTCTGTGCC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCTTTTGTGGCCTGAGTaGAGGAATTCTCCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERALLWPE*RNSPED
Trigger: ATCTTCAGGAGAATTCCTGCACTCAGGCCACAAAAG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTCACATACAGAAACCTaGTCTGAGACCACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENSHTET*SETTSL
Trigger: CAGAGAAGTGGTCTCAGAGCAGGTTTCTGTATGTGA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCATTTTTCTATCCTTTaGACCAGCTCTGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVHFSIL*TSSGIL
Trigger: CAGGATTCCAGAGCTGGTGCAAAGGATAGAAAAATG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCTGTTTTTAAGACGTTaGTTGTCAGCTCTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVLFLRR*LSALLA
Trigger: TGCAAGCAGAGCTGACAAGCAACGTCTTAAAAACAG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAGACAAATGGTGCCGTaGAGCTTTCTTAGAAACTCC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERARQMVP*SFLRNS
Trigger: GGAGTTTCTAAGAAAGCTCCACGGCACCATTTGTCT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACATGGCACAGACAAATaGTGCCGTGGAGCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEHGTDK*CRGAFL
Trigger: TAAGAAAGCTCCACGGCACCATTTGTCTGTGCCATG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGCCTGGCCAGACAGATaGCTCCTCTTTAACTTTTGT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEAWPDR*LLFNFC
Trigger: ACAAAAGTTAAAGAGGAGCCATCTGTCTGGCCAGGC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCCTTTGCACCAGCTCTaGAATCCTGATGTTATACTT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVPLHQL*NPDVIL
Trigger: AAGTATAACATCAGGATTCCAGAGCTGGTGCAAAGG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGATTCAACTTCTTCTTTaGCTGGTACTTCCGCCCTAT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAIQLLL*LVLPPY
Trigger: ATAGGGCGGAAGTACCAGTCAAAGAAGAAGTTGAAT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGATTTTCCCACATGGCTaGGACAGAACTATGTTCATG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAIFPHG*DRTMFM
Trigger: CATGAACATAGTTCTGTCTCAGCCATGTGGGAAAAT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCAAAGTCTTTTTCCTaGCTCTCTTGCAAACATCCA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAPKSFS*LSCKHP
Trigger: TGGATGTTTGCAAGAGAGTCAGGAAAAAGACTTTGG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATCAATGGCAGTAAGATaGTTCCGCTTAAACCGTCTC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGESMAVR*FRLNRL
Trigger: GAGACGGTTTAAGCGGAAGCATCTTACTGCCATTGA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTTTTGTGGCCTGAGTaGAGGAATTCTCCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGELLWPE*RNSPED
Trigger: ATCTTCAGGAGAATTCCTGCACTCAGGCCACAAAAG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATCACATACAGAAACCTaGTCTGAGACCACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGESHTET*SETTSL
Trigger: CAGAGAAGTGGTCTCAGAGCAGGTTTCTGTATGTGA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTTCAGTTTTTCACTCTaGTCAACCATGACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVFSFSL*STMTLC
Trigger: ACAGAGAGTCATGGTTGAGCAGAGTGAAAAACTGAA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCATTTTTCTATCCTTTaGACCAGCTCTGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENHFSIL*TSSGIL
Trigger: CAGGATTCCAGAGCTGGTGCAAAGGATAGAAAAATG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCTGTTTTTAAGACGTTaGTTGTCAGCTCTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENLFLRR*LSALLA
Trigger: TGCAAGCAGAGCTGACAAGCAACGTCTTAAAAACAG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAACAGAATTGCTTTTaGCCATGTCATTGGTGCACG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEQQNCF*PCHWCT
Trigger: CGTGCACCAATGACATGGCCAAAAGCAATTCTGTTG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAAGACAAATGGTGCCGTaGAGCTTTCTTAGAAACTCC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGERQMVP*SFLRNS
Trigger: GGAGTTTCTAAGAAAGCTCCACGGCACCATTTGTCT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTTCATCAGGTATCGATaGTACAGCTTCTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAFIRYR*YSFFQG
Trigger: TCCTTGGAAGAAGCTGTACCATCGATACCTGATGAA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTGTTCATGTGTAAGTTaGATGGTTTTCTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENCSCVS*MVFLPG
Trigger: GCCAGGCAAGAAAACCATCCAACTTACACATGAACA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCATGACTCTCTGTCCTTaGCTGTTCTTACACCAAATA +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVMTLCP*LFLHQI
Trigger: TATTTGGTGTAAGAACAGCCAAGGACAGAGAGTCAT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTTGCACCAGCTCTaGAATCCTGATGTTATACTT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAPLHQL*NPDVIL
Trigger: AAGTATAACATCAGGATTCCAGAGCTGGTGCAAAGG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAAGAGGTTCCATCTTGTaGTTCAGAATCAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGERGSIL*FRISCC
Trigger: ACAACAGCTGATTCTGAATCACAAGATGGAACCTCT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAATTCAACTTCTTCTTTaGCTGGTACTTCCGCCCTAT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEIQLLL*LVLPPY
Trigger: ATAGGGCGGAAGTACCAGTCAAAGAAGAAGTTGAAT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCAAAGTCTTTTTCCTaGCTCTCTTGCAAACATCCA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEPKSFS*LSCKHP
Trigger: TGGATGTTTGCAAGAGAGTCAGGAAAAAGACTTTGG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCAAAATGTTTTCCAATaGTTTGGTCATGATGAGACG +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVQNVFQ*FGHDET
Trigger: CGTCTCATCATGACCAAATCATTGGAAAACATTTTG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACACTTTGCTGACAGCTTaGTCTTCATTCATCAGGTAT +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENTLLTA*SSFIRY
Trigger: ATACCTGATGAATGAAGAGCAAGCTGTCAGCAAAGT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGACTTTGCTGACAGCTTaGTCTTCATTCATCAGGTAT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERATLLTA*SSFIRY
Trigger: ATACCTGATGAATGAAGAGCAAGCTGTCAGCAAAGT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTTCAGTTTTTCACTCTaGTCAACCATGACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENFSFSL*STMTLC
Trigger: ACAGAGAGTCATGGTTGAGCAGAGTGAAAAACTGAA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTTCAGTTTTTCACTCTaGTCAACCATGACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAFSFSL*STMTLC
Trigger: ACAGAGAGTCATGGTTGAGCAGAGTGAAAAACTGAA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCTAAAGCCTTCTTTGTaGACCCATCTTCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVLKPSL*THLLIN
Trigger: ATTTATCAGAAGATGGGTGCACAAAGAAGGCTTTAG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACATACTTTTCAACAACTaGGATCTTGGCTTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENILFNN*DLGFKL
Trigger: GAGCTTGAAGCCAAGATCGCAGTTGTTGAAAAGTAT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGATACTTTTCAACAACTaGGATCTTGGCTTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAILFNN*DLGFKL
Trigger: GAGCTTGAAGCCAAGATCGCAGTTGTTGAAAAGTAT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACATTTTTCTATCCTTTaGACCAGCTCTGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEHFSIL*TSSGIL
Trigger: CAGGATTCCAGAGCTGGTGCAAAGGATAGAAAAATG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTGTTTTTAAGACGTTaGTTGTCAGCTCTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGELFLRR*LSALLA
Trigger: TGCAAGCAGAGCTGACAAGCAACGTCTTAAAAACAG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATTCATCAGGTATCGATaGTACAGCTTCTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEFIRYR*YSFFQG
Trigger: TCCTTGGAAGAAGCTGTACCATCGATACCTGATGAA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATGTTCATGTGTAAGTTaGATGGTTTTCTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGECSCVS*MVFLPG
Trigger: GCCAGGCAAGAAAACCATCCAACTTACACATGAACA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGATGACTCTCTGTCCTTaGCTGTTCTTACACCAAATA +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAMTLCP*LFLHQI
Trigger: TATTTGGTGTAAGAACAGCCAAGGACAGAGAGTCAT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCAAAGATTTTCCCACATaGCTGAGACAGAACTATGTT +
Preference number: 4 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVKDFPT*LRQNYV
Trigger: AACATAGTTCTGTCTCAGCCATGTGGGAAAATCTTT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR TCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCAAAATGTTTTCCAATaGTTTGGTCATGATGAGACG +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAQNVFQ*FGHDET
Trigger: CGTCTCATCATGACCAAATCATTGGAAAACATTTTG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCTAAAGCCTTCTTTGTaGACCCATCTTCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERALKPSL*THLLIN
Trigger: ATTTATCAGAAGATGGGTGCACAAAGAAGGCTTTAG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGTGAGACTCCATCTCTaGAAAGTCCAAATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEVRLHL*KVQIFY
Trigger: ATAGAAGATTTGGACTTTGCAGAGATGGAGTCTCAC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAATGACTCTCTGTCCTTaGCTGTTCTTACACCAAATA +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEMTLCP*LFLHQI
Trigger: TATTTGGTGTAAGAACAGCCAAGGACAGAGAGTCAT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAAAGATTTTCCCACATaGCTGAGACAGAACTATGTT +
Preference number: 4 (lower is better)
Translates to: AFFTRGPRQAALHCGERAKDFPT*LRQNYV
Trigger: AACATAGTTCTGTCTCAGCCATGTGGGAAAATCTTT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTAAAGCCTTCTTTGTaGACCCATCTTCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGELKPSL*THLLIN
Trigger: ATTTATCAGAAGATGGGTGCACAAAGAAGGCTTTAG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAAAAGATTTTCCCACATaGCTGAGACAGAACTATGTT +
Preference number: 4 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEKDFPT*LRQNYV
Trigger: AACATAGTTCTGTCTCAGCCATGTGGGAAAATCTTT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS GCA 90 bp TTCCGCTTAAACCGTCTCATGTGGCGCTCCGGACCCGGACCCCGCTaGCGCCGCCGCCGGGCCCGCGCCGCCGGCCGCTCAGCCCAGCGT +
Preference number: 5 (lower is better)
Translates to: FRLNRLMWRSGPGPR*RRRRARAAGRSAQR
Trigger: ACGCTGGGCTGAGCGGCCGGCGGCGCGGGCCCGGCGGCGGCGGCAGCGGGGTCCGGGTCCGGAGCGCCACATGAGACGGTTTAAGCGGAA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362091.9
ENST00000397269.7
CDS CCA 90 bp GGGAGGTGTTGCCGCACACACGCCTCAGCCTCGGGGAGGAGGGGGTaGTCCCTCAGACTCCACAGCACCCTCTCGGGATCCACACTCGGA +
Preference number: 5 (lower is better)
Translates to: GRCCRTHASASGRRG*SLRLHSTLSGSTLG
Trigger: TCCGAGTGTGGATCCCGAGAGGGTGCTGTGGAGTCTGAGGGACCACCCCCTCCTCCCCGAGGCTGAGGCGTGTGTGCGGCAACACCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000470089.5
ENST00000494526.1
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCACCAGGGCCCAGATGTaGACACCCCCGGCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVTRAQM*TPPAAA
Trigger: CGCTGCTGCCGGGGGTGTCAACATCTGGGCCCTGGT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS GCA 90 bp GGAAGAGCAGGGCCTCATGCCGGGGCAGTACGATGTTCTCCACAGTaGGCTCCATGGCGCGCACCTGCTCCGGGGAGGCTGTCAGGAACG +
Preference number: 5 (lower is better)
Translates to: GRAGPHAGAVRCSPQ*APWRAPAPGRLSGT
Trigger: CGTTCCTGACAGCCTCCCCGGAGCAGGTGCGCGCCATGGAGCGCACTGTGGAGAACATCGTACTGCCCCGGCATGAGGCCCTGCTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGAGGTCGGGGAGGTGTaGCCGCACACACGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAEVGEV*PHTRLS
Trigger: GCTGAGGCGTGTGTGCGGCAACACCTCCCCGACCTC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGAGGTCGGGGAGGTGTaGCCGCACACACGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENEVGEV*PHTRLS
Trigger: GCTGAGGCGTGTGTGCGGCAACACCTCCCCGACCTC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGACCAGGGCCCAGATGTaGACACCCCCGGCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERATRAQM*TPPAAA
Trigger: CGCTGCTGCCGGGGGTGTCAACATCTGGGCCCTGGT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGAGGTCGGGGAGGTGTaGCCGCACACACGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEEVGEV*PHTRLS
Trigger: GCTGAGGCGTGTGTGCGGCAACACCTCCCCGACCTC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS GCA 90 bp CTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTaGGCCTTGTCCTCAGAAGACGAGGAAGAGCAGGGCCTCATGCCG +
Preference number: 5 (lower is better)
Translates to: LHAGSSASCSALRRT*ALSSEDEEEQGLMP
Trigger: CGGCATGAGGCCCTGCTCTTCCTCGTCTTCTGAGGACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000481029.1
CDS GCA 90 bp GAACGTGCGCCTTGTCCTCAGAAGACGAGGAAGAGCAGGGCCTCATaGCGGGGCAGTACGATGTTCTCCACAGTGCGCTCCATGGCGCGC +
Preference number: 5 (lower is better)
Translates to: ERAPCPQKTRKSRAS*RGSTMFSTVRSMAR
Trigger: GCGCGCCATGGAGCGCACTGTGGAGAACATCGTACTGCCCCGGCATGAGGCCCTGCTCTTCCTCGTCTTCTGAGGACAAGGCGCACGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000481029.1
CDS GCA 90 bp CCCCCTCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTaGACTGCGGAGAACGTGCGCCTTGTCCTCAGAAGACGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: PPRWLSSRGVLGKLL*TAENVRLVLRRRGR
Trigger: TCTTCCTCGTCTTCTGAGGACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000481029.1
CDS CCA 90 bp GGGCATCCTCACAGAAGGGGGACCGCAGACACCACCCTAACCTCCTaGGTCTCCTCAACAGCCTCTCCACGCCAGAGGGTCTCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: GHPHRRGTADTTLTS*VSSTASPRQRVSSA
Trigger: AGCACTGGAGACCCTCTGGCGTGGAGAGGCTGTTGAGGAGACCCAGGAGGTTAGGGTGGTGTCTGCGGTCCCCCTTCTGTGAGGATGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489042.1
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCACGTCCCCAGCATCTaGGTCGGTTTCACCAGACTC +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVHVPSI*VGFTRL
Trigger: GAGTCTGGTGAAACCGACCAAGATGCTGGGGACGTG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGAGGCCAGCGAAGGCTaGCTCAGCTGCCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENEASEG*LSCQSF
Trigger: GAAACTCTGGCAGCTGAGCAAGCCTTCGCTGGCCTC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGAGGCCAGCGAAGGCTaGCTCAGCTGCCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAEASEG*LSCQSF
Trigger: GAAACTCTGGCAGCTGAGCAAGCCTTCGCTGGCCTC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGACTGTGAACAGGGCGTaGACCGCACCCCGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERATVNRA*TAPRKV
Trigger: TACCTTCCGGGGTGCGGTCAACGCCCTGTTCACAGT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACACTGTGAACAGGGCGTaGACCGCACCCCGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENTVNRA*TAPRKV
Trigger: TACCTTCCGGGGTGCGGTCAACGCCCTGTTCACAGT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGGACAACAAGGCCACTaGCCCCTTTGCGTCACCTCT +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVGQQGH*PLCVTS
Trigger: AGAGGTGACGCAAAGGGGCAAGTGGCCTTGTTGTCC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTCAAACACGTTGGCGTaGGTCCGGGACAACAAGGCC +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVSNTLA*VRDNKA
Trigger: GGCCTTGTTGTCCCGGACCAACGCCAACGTGTTTGA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGCCTCATCAAACACGTaGGCGTTGGTCCGGGACAAC +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVASSNT*ALVRDN
Trigger: GTTGTCCCGGACCAACGCCAACGTGTTTGATGAGGC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTTGGCTTCAAGCTCCTaGTCCTCGGCAGCGGTCACA +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVLASSS*SSAAVT
Trigger: TGTGACCGCTGCCGAGGACAAGGAGCTTGAAGCCAA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCGGAGAACGTGCGCCTaGTCCTCAGAAGACGAGGAA +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVRRTCA*SSEDEE
Trigger: TTCCTCGTCTTCTGAGGACAAGGCGCACGTTCTCCG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS GCA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTaGGGAGAACGTGCGCCTTGTCCTCAGAAGACGAGGAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALH*GERAPCPQKTRKSR
Trigger: CCTGCTCTTCCTCGTCTTCTGAGGACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000481029.1
CDS CCA 90 bp CAAAGGCAGCACCCTGCGGTCACACTGTCAACTCCCATACAGCAGTaGAGCCAGGGCATCCTCACAGAAGGGGGACCGCAGACACCACCC +
Preference number: 5 (lower is better)
Translates to: QRQHPAVTLSTPIQQ*SQGILTEGGPQTPP
Trigger: GGGTGGTGTCTGCGGTCCCCCTTCTGTGAGGATGCCCTGGCTCCACTGCTGTATGGGAGTTGACAGTGTGACCGCAGGGTGCTGCCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489042.1
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCTTTTGGCCATGTCATaGGTGCACGGCTGCTTGCCT +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVLLAMS*VHGCLP
Trigger: AGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCACGTCCCCAGCATCTaGGTCGGTTTCACCAGACTC +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENHVPSI*VGFTRL
Trigger: GAGTCTGGTGAAACCGACCAAGATGCTGGGGACGTG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGTTTTGCAGATGACGTaGCTGGGGAAGACGCGTTCG +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVVLQMT*LGKTRS
Trigger: CGAACGCGTCTTCCCCAGCAACGTCATCTGCAAAAC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGAGGCCAGCGAAGGCTaGCTCAGCTGCCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEEASEG*LSCQSF
Trigger: GAAACTCTGGCAGCTGAGCAAGCCTTCGCTGGCCTC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAACTGTGAACAGGGCGTaGACCGCACCCCGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGETVNRA*TAPRKV
Trigger: TACCTTCCGGGGTGCGGTCAACGCCCTGTTCACAGT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGGACAACAAGGCCACTaGCCCCTTTGCGTCACCTCT +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENGQQGH*PLCVTS
Trigger: AGAGGTGACGCAAAGGGGCAAGTGGCCTTGTTGTCC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTCAAACACGTTGGCGTaGGTCCGGGACAACAAGGCC +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENSNTLA*VRDNKA
Trigger: GGCCTTGTTGTCCCGGACCAACGCCAACGTGTTTGA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGCCTCATCAAACACGTaGGCGTTGGTCCGGGACAAC +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENASSNT*ALVRDN
Trigger: GTTGTCCCGGACCAACGCCAACGTGTTTGATGAGGC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGCCTCATCAAACACGTaGGCGTTGGTCCGGGACAAC +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAASSNT*ALVRDN
Trigger: GTTGTCCCGGACCAACGCCAACGTGTTTGATGAGGC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACACAGGGATGGCATTGTaGCACTGTCCCACGCAGCAG +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENTGMAL*HCPTQQ
Trigger: CTGCTGCGTGGGACAGTGCAACAATGCCATCCCTGT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGACAGGGATGGCATTGTaGCACTGTCCCACGCAGCAG +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERATGMAL*HCPTQQ
Trigger: CTGCTGCGTGGGACAGTGCAACAATGCCATCCCTGT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTCAACAGGGATGGCATaGTTGCACTGTCCCACGCAG +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVSTGMA*LHCPTQ
Trigger: CTGCGTGGGACAGTGCAACAATGCCATCCCTGTTGA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCGGAGAACGTGCGCCTaGTCCTCAGAAGACGAGGAA +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENRRTCA*SSEDEE
Trigger: TTCCTCGTCTTCTGAGGACAAGGCGCACGTTCTCCG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAATGGCAGGTCCAGCTaGGGCTGGTGTCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENNGRSS*GWCPLP
Trigger: AGGAAGAGGACACCAGCCCAAGCTGGACCTGCCATT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS TCA 90 bp CCCTCATGGCGTAGAGAAGCACGGCTATGCAGTACAGGGTCTCGGTaGCATCTGGCATGGTCACCGTGGAGCTGGGTCTCCGGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: PSWRREARLCSTGSR*HLAWSPWSWVSGGR
Trigger: TCTGCCTCCGGAGACCCAGCTCCACGGTGACCATGCCAGATGTCACCGAGACCCTGTACTGCATAGCCGTGCTTCTCTACGCCATGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS CCA 90 bp GGCGTAGAGAAGCACGGCTATGCAGTACAGGGTCTCGGTGACATCTaGCATGGTCACCGTGGAGCTGGGTCTCCGGAGGCAGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: GVEKHGYAVQGLGDI*HGHRGAGSPEAEEQ
Trigger: CTGCTCTTCTGCCTCCGGAGACCCAGCTCCACGGTGACCATGCCAGATGTCACCGAGACCCTGTACTGCATAGCCGTGCTTCTCTACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTCTGTTTGTCCATCTTaGACCGAAGGGCTGGGTCAC +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVSVCPS*TEGLGH
Trigger: GTGACCCAGCCCTTCGGTCAAAGATGGACAAACAGA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTTGGTGCACGGCTGCTaGCCTGCTAGGAAGAACTCA +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERALVHGC*PARKNS
Trigger: TGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCTTTTGGCCATGTCATaGGTGCACGGCTGCTTGCCT +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENLLAMS*VHGCLP
Trigger: AGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCAGGATGCCGTCCACTTaGCTGACAGCTTGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVRMPST*LTACSS
Trigger: TGAAGAGCAAGCTGTCAGCAAAGTGGACGGCATCCT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTTTTGCAGATGACGTaGCTGGGGAAGACGCGTTCG +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENVLQMT*LGKTRS
Trigger: CGAACGCGTCTTCCCCAGCAACGTCATCTGCAAAAC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCATGGAGTGGAAGGTTTaGCAGATGACGTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVMEWKV*QMTLLG
Trigger: CCCCAGCAACGTCATCTGCAAAACCTTCCACTCCAT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATTGGCTTCAAGCTCCTaGTCCTCGGCAGCGGTCACA +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGELASSS*SSAAVT
Trigger: TGTGACCGCTGCCGAGGACAAGGAGCTTGAAGCCAA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGCTTGTCAGCTCTGCTaGCAAGAAGTACTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAACQLC*QEVLPS
Trigger: GCTGGGGAGTACTTCTTGCAAGCAGAGCTGACAAGC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGCTTGTCAGCTCTGCTaGCAAGAAGTACTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENACQLC*QEVLPS
Trigger: GCTGGGGAGTACTTCTTGCAAGCAGAGCTGACAAGC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTCAACAGGGATGGCATaGTTGCACTGTCCCACGCAG +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENSTGMA*LHCPTQ
Trigger: CTGCGTGGGACAGTGCAACAATGCCATCCCTGTTGA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGGAGAACGTGCGCCTaGTCCTCAGAAGACGAGGAA +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGERRTCA*SSEDEE
Trigger: TTCCTCGTCTTCTGAGGACAAGGCGCACGTTCTCCG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAAATGGCAGGTCCAGCTaGGGCTGGTGTCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGENGRSS*GWCPLP
Trigger: AGGAAGAGGACACCAGCCCAAGCTGGACCTGCCATT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS CCA 90 bp CCTGGCCTCCCTAGGCCTTGTGCATGGCACAGACAAATGGTGCCGTaGAGCTTTCTTAGAAACTCCATCCCACCGGCTGGTCCCGGTAGC +
Preference number: 5 (lower is better)
Translates to: PGLPRPCAWHRQMVP*SFLRNSIPPAGPGS
Trigger: GCTACCGGGACCAGCCGGTGGGATGGAGTTTCTAAGAAAGCTCCACGGCACCATTTGTCTGTGCCATGCACAAGGCCTAGGGAGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CCA 90 bp ACTAGCTCGCCCTTCTCTGGAGGGAAACGGGTCCCTGACTCAGACTaGGCCTGCTTCTTTCTCGTCCCTGTCACTTGGGTGCGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: TSSPFSGGKRVPDSD*ACFFLVPVTWVRPS
Trigger: GGAAGGACGCACCCAAGTGACAGGGACGAGAAAGAAGCAGGCCCAGTCTGAGTCAGGGACCCGTTTCCCTCCAGAGAAGGGCGAGCTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTCTGTTTGTCCATCTTaGACCGAAGGGCTGGGTCAC +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENSVCPS*TEGLGH
Trigger: GTGACCCAGCCCTTCGGTCAAAGATGGACAAACAGA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAGGATGCCGTCCACTTaGCTGACAGCTTGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERARMPST*LTACSS
Trigger: TGAAGAGCAAGCTGTCAGCAAAGTGGACGGCATCCT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAGGATGCCGTCCACTTaGCTGACAGCTTGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENRMPST*LTACSS
Trigger: TGAAGAGCAAGCTGTCAGCAAAGTGGACGGCATCCT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGAGTTGGATGGTTTTCTaGCCTGGCCAGACAGATGGC +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERASWMVF*PGQTDG
Trigger: GCCATCTGTCTGGCCAGGCAAGAAAACCATCCAACT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAGTTGGATGGTTTTCTaGCCTGGCCAGACAGATGGC +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENSWMVF*PGQTDG
Trigger: GCCATCTGTCTGGCCAGGCAAGAAAACCATCCAACT...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCACTTCTCTGCATACTaGACCAGCGTTGAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVHFSAY*TSVEVF
Trigger: GAAGACCTCAACGCTGGTCAAGTATGCAGAGAAGTG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGTTTTGCAGATGACGTaGCTGGGGAAGACGCGTTCG +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEVLQMT*LGKTRS
Trigger: CGAACGCGTCTTCCCCAGCAACGTCATCTGCAAAAC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGATGGAGTGGAAGGTTTaGCAGATGACGTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAMEWKV*QMTLLG
Trigger: CCCCAGCAACGTCATCTGCAAAACCTTCCACTCCAT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGCGGTCACATACCTCTaGAAGCCACTAAAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVAVTYL*KPLKPS
Trigger: AGAAGGCTTTAGTGGCTTCAAGAGGTATGTGACCGC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTCAACAACTGCGATCTaGGCTTCAAGCTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVSTTAI*ASSSLS
Trigger: GGACAAGGAGCTTGAAGCCAAGATCGCAGTTGTTGA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGCTTGTCAGCTCTGCTaGCAAGAAGTACTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEACQLC*QEVLPS
Trigger: GCTGGGGAGTACTTCTTGCAAGCAGAGCTGACAAGC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATCAACAGGGATGGCATaGTTGCACTGTCCCACGCAG +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGESTGMA*LHCPTQ
Trigger: CTGCGTGGGACAGTGCAACAATGCCATCCCTGTTGA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGAATGTACTCTGAGGTaGGGAGTTCGAGACCAGCCT +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAECTLR*GVRDQP
Trigger: AGGCTGGTCTCGAACTCCCAACCTCAGAGTACATTC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397269.7
CDS TCA 90 bp TCCGCCCTATGTGCCCGTAGGCCATGGAGTGGAAGGTTTTGCAGATaGCGTTGCTGGGGAAGACGCGTTCGGCCTGCTTTGCGATGCTCT +
Preference number: 5 (lower is better)
Translates to: SALCARRPWSGRFCR*RCWGRRVRPALRCS
Trigger: AGAGCATCGCAAAGCAGGCCGAACGCGTCTTCCCCAGCAACGTCATCTGCAAAACCTTCCACTCCATGGCCTACGGGCACATAGGGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000460453.1
CDS TCA 90 bp TCCCTGGGCAAGTCAGTGCAGTGCAGTAGCCTCTCCGTCTCCGACTaGGGAGCAAAGCCCTCGGCTCAAGATCCTCACCTACTTCACAGG +
Preference number: 5 (lower is better)
Translates to: SLGKSVQCSSLSVSD*GAKPSAQDPHLLHR
Trigger: CCTGTGAAGTAGGTGAGGATCTTGAGCCGAGGGCTTTGCTCCTCAGTCGGAGACGGAGAGGCTACTGCACTGCACTGACTTGCCCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS GCA 90 bp TCTTGCCTGGCCTCCCTAGGCCTTGTGCATGGCACAGACAAATGGTaGCGTGGAGCTTTCTTAGAAACTCCATCCCACCGGCTGGTCCCG +
Preference number: 5 (lower is better)
Translates to: SCLASLGLVHGTDKW*RGAFLETPSHRLVP
Trigger: CGGGACCAGCCGGTGGGATGGAGTTTCTAAGAAAGCTCCACGGCACCATTTGTCTGTGCCATGCACAAGGCCTAGGGAGGCCAGGCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS GCA 90 bp GTCGGTTTCACCAGACTCCGCAGAGAGCCGAGACGTACTGTCCTCTaGTTCTTGCCTGGCCTCCCTAGGCCTTGTGCATGGCACAGACAA +
Preference number: 5 (lower is better)
Translates to: VGFTRLRREPRRTVL*FLPGLPRPCAWHRQ
Trigger: TTGTCTGTGCCATGCACAAGGCCTAGGGAGGCCAGGCAAGAAGCAGAGGACAGTACGTCTCGGCTCTCTGCGGAGTCTGGTGAAACCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS GCA 90 bp TCGCCCTTCTCTGGAGGGAAACGGGTCCCTGACTCAGACTGGGCCTaGTTCTTTCTCGTCCCTGTCACTTGGGTGCGTCCTTCCAATGCA +
Preference number: 5 (lower is better)
Translates to: SPFSGGKRVPDSDWA*FFLVPVTWVRPSNA
Trigger: TGCATTGGAAGGACGCACCCAAGTGACAGGGACGAGAAAGAAGCAGGCCCAGTCTGAGTCAGGGACCCGTTTCCCTCCAGAGAAGGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS CCA 90 bp GGAGCTTTCTTAGAAACTCCATCCCACCGGCTGGTCCCGGTAGCCTaGTTACTCTCTTCCTCAGAGGACCAAGACCGCTTCCTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: GAFLETPSHRLVPVA*LLSSSEDQDRFLEG
Trigger: GCCCTCCAGGAAGCGGTCTTGGTCCTCTGAGGAAGAGAGTAACCAGGCTACCGGGACCAGCCGGTGGGATGGAGTTTCTAAGAAAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CCA 90 bp AAGGGAATTCCCCTTCCGTCACCCGTACGGCCTCATCAAACACGTTaGCGTTGGTCCGGGACAACAAGGCCACTTGCCCCTTTGCGTCAC +
Preference number: 5 (lower is better)
Translates to: KGIPLPSPVRPHQTR*RWSGTTRPLAPLRH
Trigger: GTGACGCAAAGGGGCAAGTGGCCTTGTTGTCCCGGACCAACGCCAACGTGTTTGATGAGGCCGTACGGGTGACGGAAGGGGAATTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000475867.5
CDS CCA 90 bp GTCCCTGACTCAGACTGGGCCTGCTTCTTTCTCGTCCCTGTCACTTaGGTGCGTCCTTCCAATGCACCAAGGCCAGGTGGGTACTCACGT +
Preference number: 5 (lower is better)
Translates to: VPDSDWACFFLVPVT*VRPSNAPRPGGYSR
Trigger: ACGTGAGTACCCACCTGGCCTTGGTGCATTGGAAGGACGCACCCAAGTGACAGGGACGAGAAAGAAGCAGGCCCAGTCTGAGTCAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGGTTCGGATCTCTGTTaGTCCATCTTTGACCGAAGG +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAGSDLC*SIFDRR
Trigger: CCTTCGGTCAAAGATGGACAAACAGAGATCCGAACC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGGTTCGGATCTCTGTTaGTCCATCTTTGACCGAAGG +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENGSDLC*SIFDRR
Trigger: CCTTCGGTCAAAGATGGACAAACAGAGATCCGAACC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCCAACAGAATTGCTTTaGGCCATGTCATTGGTGCAC +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVPTELL*AMSLVH
Trigger: GTGCACCAATGACATGGCCAAAAGCAATTCTGTTGG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTCCTGGCCAACAGAATaGCTTTTGGCCATGTCATTG +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVSWPTE*LLAMSL
Trigger: CAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAAGTTGGATGGTTTTCTaGCCTGGCCAGACAGATGGC +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGESWMVF*PGQTDG
Trigger: GCCATCTGTCTGGCCAGGCAAGAAAACCATCCAACT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCACTTCTCTGCATACTaGACCAGCGTTGAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAHFSAY*TSVEVF
Trigger: GAAGACCTCAACGCTGGTCAAGTATGCAGAGAAGTG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAATGGAGTGGAAGGTTTaGCAGATGACGTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEMEWKV*QMTLLG
Trigger: CCCCAGCAACGTCATCTGCAAAACCTTCCACTCCAT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTCAGCAAGGACGGAGTaGACCATGAAGGGTGTTAAC +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERASARTE*TMKGVN
Trigger: GTTAACACCCTTCATGGTCAACTCCGTCCTTGCTGA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGTCTTACACACAAGCTaGGCTCTTATGAATCCACCC +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVVLHTS*ALMNPP
Trigger: GGGTGGATTCATAAGAGCCAAGCTTGTGTGTAAGAC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGCGGTCACATACCTCTaGAAGCCACTAAAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAAVTYL*KPLKPS
Trigger: AGAAGGCTTTAGTGGCTTCAAGAGGTATGTGACCGC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTCAACAACTGCGATCTaGGCTTCAAGCTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENSTTAI*ASSSLS
Trigger: GGACAAGGAGCTTGAAGCCAAGATCGCAGTTGTTGA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCATGATGAGACGCTTCTaGGCTCGAGTTACTGCAACA +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVMMRRF*ARVTAT
Trigger: TGTTGCAGTAACTCGAGCCAAGAAGCGTCTCATCAT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCCTGTTTTTAAGACGTaGCTTGTCAGCTCTGCTTGC +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVPVFKT*LVSSAC
Trigger: GCAAGCAGAGCTGACAAGCAACGTCTTAAAAACAGG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS TCA 90 bp GCTCAGTGCTTCCTGGCAGGGCAAGGTCCCAAGAAGCCCATAGTATaGGTCAGGAATGGGATCAGGACCCACGTCCCCAGCATCTTGGTC +
Preference number: 5 (lower is better)
Translates to: AQCFLAGQGPKKPIV*VRNGIRTHVPSILV
Trigger: GACCAAGATGCTGGGGACGTGGGTCCTGATCCCATTCCTGACTCATACTATGGGCTTCTTGGGACCTTGCCCTGCCAGGAAGCACTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS GCA 90 bp TGTCATTGGTGCACGGCTGCTTGCCTGCTAGGAAGAACTCAGGGATaGATCTTTGACTTCCCTGACCTCGGCCTCCCGCAAAGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: CHWCTAACLLGRTQG*IFDFPDLGLPQSAG
Trigger: GCCAGCACTTTGCGGGAGGCCGAGGTCAGGGAAGTCAAAGATGCATCCCTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469009.5
CDS GCA 90 bp GGCCTGCTTCTTTCTCGTCCCTGTCACTTGGGTGCGTCCTTCCAATaGACCAAGGCCAGGTGGGTACTCACGTTTCCTCCGTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GLLLSRPCHLGASFQ*TKARWVLTFPPFFL
Trigger: GAGGAAGAACGGAGGAAACGTGAGTACCCACCTGGCCTTGGTGCATTGGAAGGACGCACCCAAGTGACAGGGACGAGAAAGAAGCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS GCA 90 bp CTGACTCAGACTGGGCCTGCTTCTTTCTCGTCCCTGTCACTTGGGTaGGTCCTTCCAATGCACCAAGGCCAGGTGGGTACTCACGTTTCC +
Preference number: 5 (lower is better)
Translates to: LTQTGPASFSSLSLG*VLPMHQGQVGTHVS
Trigger: GGAAACGTGAGTACCCACCTGGCCTTGGTGCATTGGAAGGACGCACCCAAGTGACAGGGACGAGAAAGAAGCAGGCCCAGTCTGAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS CCA 90 bp GCTTCTTGCCTGGCCTCCCTAGGCCTTGTGCATGGCACAGACAAATaGTGCCGTGGAGCTTTCTTAGAAACTCCATCCCACCGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: ASCLASLGLVHGTDK*CRGAFLETPSHRLV
Trigger: GACCAGCCGGTGGGATGGAGTTTCTAAGAAAGCTCCACGGCACCATTTGTCTGTGCCATGCACAAGGCCTAGGGAGGCCAGGCAAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CCA 90 bp CCTGGCAGGGCAAGGTCCCAAGAAGCCCATAGTATGAGTCAGGAATaGGATCAGGACCCACGTCCCCAGCATCTTGGTCGGTTTCACCAG +
Preference number: 5 (lower is better)
Translates to: PGRARSQEAHSMSQE*DQDPRPQHLGRFHQ
Trigger: CTGGTGAAACCGACCAAGATGCTGGGGACGTGGGTCCTGATCCCATTCCTGACTCATACTATGGGCTTCTTGGGACCTTGCCCTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CCA 90 bp AAGACCAGCAAGTGGGCACTCGTCCTCTGGCATCTCCTGTGGAGATaGCCCAGGGGCCCTGCGCAATGTAGCCCATTATCACATGACTCA +
Preference number: 5 (lower is better)
Translates to: KTSKWALVLWHLLWR*PRGPAQCSPLSHDS
Trigger: TGAGTCATGTGATAATGGGCTACATTGCGCAGGGCCCCTGGGCCATCTCCACAGGAGATGCCAGAGGACGAGTGCCCACTTGCTGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379999.6
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCAACAGAATTGCTTTaGGCCATGTCATTGGTGCAC +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAPTELL*AMSLVH
Trigger: GTGCACCAATGACATGGCCAAAAGCAATTCTGTTGG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTCCTGGCCAACAGAATaGCTTTTGGCCATGTCATTG +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENSWPTE*LLAMSL
Trigger: CAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGATTCAACTTCTTCTTaGACTGGTACTTCCGCCCTA +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVDSTSS*TGTSAL
Trigger: TAGGGCGGAAGTACCAGTCAAAGAAGAAGTTGAATC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATCAGCAAGGACGGAGTaGACCATGAAGGGTGTTAAC +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGESARTE*TMKGVN
Trigger: GTTAACACCCTTCATGGTCAACTCCGTCCTTGCTGA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCCCACTAAAGCCTTCTTaGTGCACCCATCTTCTGATA +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVPLKPS*CTHLLI
Trigger: TATCAGAAGATGGGTGCACAAAGAAGGCTTTAGTGG...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATCAACAACTGCGATCTaGGCTTCAAGCTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGESTTAI*ASSSLS
Trigger: GGACAAGGAGCTTGAAGCCAAGATCGCAGTTGTTGA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCGCATTTTTCTATCCTTaGCACCAGCTCTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVAFFYP*HQLWNP
Trigger: AGGATTCCAGAGCTGGTGCAAAGGATAGAAAAATGC...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGATGATGAGACGCTTCTaGGCTCGAGTTACTGCAACA +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAMMRRF*ARVTAT
Trigger: TGTTGCAGTAACTCGAGCCAAGAAGCGTCTCATCAT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCCTGTTTTTAAGACGTaGCTTGTCAGCTCTGCTTGC +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENPVFKT*LVSSAC
Trigger: GCAAGCAGAGCTGACAAGCAACGTCTTAAAAACAGG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS TCA 90 bp GCACTTGACAGGTCCAATGGCAGCCTGAAGTCACCTCGTAGCTCATaGGTGATGGTGCCAACACAAGAACCCGGGTCTCCTGACTCCCCT +
Preference number: 5 (lower is better)
Translates to: ALDRSNGSLKSPRSS*VMVPTQEPGSPDSP
Trigger: AGGGGAGTCAGGAGACCCGGGTTCTTGTGTTGGCACCATCACTCATGAGCTACGAGGTGACTTCAGGCTGCCATTGGACCTGTCAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379999.6
CDS GCA 90 bp AGAGTTTCAAGTAGCCGTCATGAGTCATCTGGTGCGCCTCTTCTGTaGACTCCCCCAGCTTCCGCATGTTATCCCAGAGGCGGCTCGCTT +
Preference number: 5 (lower is better)
Translates to: RVSSSRHESSGAPLL*TPPASACYPRGGSL
Trigger: AAGCGAGCCGCCTCTGGGATAACATGCGGAAGCTGGGGGAGTGCACAGAAGAGGCGCACCAGATGACTCATGACGGCTACTTGAAACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000489042.1
CDS GCA 90 bp GCATATGGTAACCCAGAGTTTGAGACCCTGGCAAAGGCAGCACCCTaGGGTCACACTGTCAACTCCCATACAGCAGTGGAGCCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: AYGNPEFETLAKAAP*GHTVNSHTAVEPGH
Trigger: ATGCCCTGGCTCCACTGCTGTATGGGAGTTGACAGTGTGACCGCAGGGTGCTGCCTTTGCCAGGGTCTCAAACTCTGGGTTACCATATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489042.1
CDS CCA 90 bp CGTCCCTGTCACTTGGGTGCGTCCTTCCAATGCACCAAGGCCAGGTaGGTACTCACGTTTCCTCCGTTCTTCCTCTGGCTGAAGAAGGAT +
Preference number: 5 (lower is better)
Translates to: RPCHLGASFQCTKAR*VLTFPPFFLWLKKD
Trigger: ATCCTTCTTCAGCCAGAGGAAGAACGGAGGAAACGTGAGTACCCACCTGGCCTTGGTGCATTGGAAGGACGCACCCAAGTGACAGGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCAACAGAATTGCTTTaGGCCATGTCATTGGTGCAC +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEPTELL*AMSLVH
Trigger: GTGCACCAATGACATGGCCAAAAGCAATTCTGTTGG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATCCTGGCCAACAGAATaGCTTTTGGCCATGTCATTG +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGESWPTE*LLAMSL
Trigger: CAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCACTTTGCTGACAGCTaGCTCTTCATTCATCAGGTA +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAHFADS*LFIHQV
Trigger: TACCTGATGAATGAAGAGCAAGCTGTCAGCAAAGTG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTTGTTCATGTGTAAGTaGGATGGTTTTCTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVLFMCK*DGFLAW
Trigger: CCAGGCAAGAAAACCATCCAACTTACACATGAACAA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGATTCAACTTCTTCTTaGACTGGTACTTCCGCCCTA +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERADSTSS*TGTSAL
Trigger: TAGGGCGGAAGTACCAGTCAAAGAAGAAGTTGAATC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAGTCTTACACACAAGCTaGGCTCTTATGAATCCACCC +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEVLHTS*ALMNPP
Trigger: GGGTGGATTCATAAGAGCCAAGCTTGTGTGTAAGAC...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCATGACTCTCTGTCCTaGGCTGTTCTTACACCAAAT +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAHDSLS*AVLTPN
Trigger: ATTTGGTGTAAGAACAGCCAAGGACAGAGAGTCATG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCAATCAAATGTATCCTaGAAGGGAATTCCCCTTCCG +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENQSNVS*KGIPLP
Trigger: CGGAAGGGGAATTCCCTTCAAGGATACATTTGATTG...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCAATCAAATGTATCCTaGAAGGGAATTCCCCTTCCG +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAQSNVS*KGIPLP
Trigger: CGGAAGGGGAATTCCCTTCAAGGATACATTTGATTG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTTTAATGACGAGGTTTaGTTTCCTCCGTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVFNDEV*FPPFFL
Trigger: GAGGAAGAACGGAGGAAACAAAACCTCGTCATTAAA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCACTAAAGCCTTCTTaGTGCACCCATCTTCTGATA +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAPLKPS*CTHLLI
Trigger: TATCAGAAGATGGGTGCACAAAGAAGGCTTTAGTGG...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGCATTTTTCTATCCTTaGCACCAGCTCTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENAFFYP*HQLWNP
Trigger: AGGATTCCAGAGCTGGTGCAAAGGATAGAAAAATGC...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGGCATTTTTCTATCCTTaGCACCAGCTCTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAAFFYP*HQLWNP
Trigger: AGGATTCCAGAGCTGGTGCAAAGGATAGAAAAATGC...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAATGATGAGACGCTTCTaGGCTCGAGTTACTGCAACA +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEMMRRF*ARVTAT
Trigger: TGTTGCAGTAACTCGAGCCAAGAAGCGTCTCATCAT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCTTTTTAAGACGTTGCTaGTCAGCTCTGCTTGCAAGA +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVFLRRC*SALLAR
Trigger: TCTTGCAAGCAGAGCTGACAAGCAACGTCTTAAAAA...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACCTGTTTTTAAGACGTaGCTTGTCAGCTCTGCTTGC +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEPVFKT*LVSSAC
Trigger: GCAAGCAGAGCTGACAAGCAACGTCTTAAAAACAGG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACACTTTGCTGACAGCTaGCTCTTCATTCATCAGGTA +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEHFADS*LFIHQV
Trigger: TACCTGATGAATGAAGAGCAAGCTGTCAGCAAAGTG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTTGTTCATGTGTAAGTaGGATGGTTTTCTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERALFMCK*DGFLAW
Trigger: CCAGGCAAGAAAACCATCCAACTTACACATGAACAA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACATGACTCTCTGTCCTaGGCTGTTCTTACACCAAAT +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEHDSLS*AVLTPN
Trigger: ATTTGGTGTAAGAACAGCCAAGGACAGAGAGTCATG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACAATCAAATGTATCCTaGAAGGGAATTCCCCTTCCG +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEQSNVS*KGIPLP
Trigger: CGGAAGGGGAATTCCCTTCAAGGATACATTTGATTG...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTTTAATGACGAGGTTTaGTTTCCTCCGTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAFNDEV*FPPFFL
Trigger: GAGGAAGAACGGAGGAAACAAAACCTCGTCATTAAA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTTTAATGACGAGGTTTaGTTTCCTCCGTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENFNDEV*FPPFFL
Trigger: GAGGAAGAACGGAGGAAACAAAACCTCGTCATTAAA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCATGTTTTCCAATGATTaGGTCATGATGAGACGCTTC +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVMFSND*VMMRRF
Trigger: GAAGCGTCTCATCATGACCAAATCATTGGAAAACAT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTTTTTAAGACGTTGCTaGTCAGCTCTGCTTGCAAGA +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAFLRRC*SALLAR
Trigger: TCTTGCAAGCAGAGCTGACAAGCAACGTCTTAAAAA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTTTTTAAGACGTTGCTaGTCAGCTCTGCTTGCAAGA +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENFLRRC*SALLAR
Trigger: TCTTGCAAGCAGAGCTGACAAGCAACGTCTTAAAAA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS GCA 90 bp TCATGTCACCCTCAGAGTCCTGACAGCTGTCCTGGCCAACAGAATTaGTTTTGGCCATGTCATTGGTGCACGGCTGCTTGCCTGCTAGGA +
Preference number: 5 (lower is better)
Translates to: SCHPQSPDSCPGQQN*FWPCHWCTAACLLG
Trigger: TCCTAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGACAGCTGTCAGGACTCTGAGGGTGACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS GCA 90 bp GGGCCTCATCCACAAAGATGGCGTCAAAAGAGGCCAGCGAAGGCTTaGTCAGCTGCCAGAGTTTCAAGTAGCCGTCATGAGTCATCTGGT +
Preference number: 5 (lower is better)
Translates to: GPHPQRWRQKRPAKA*SAARVSSSRHESSG
Trigger: ACCAGATGACTCATGACGGCTACTTGAAACTCTGGCAGCTGAGCAAGCCTTCGCTGGCCTCTTTTGACGCCATCTTTGTGGATGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS GCA 90 bp TGCACTGTCCCACGCAGCAGCGCACCACGCCTGTTTTTAAGACGTTaGTTGTCAGCTCTGCTTGCAAGAAGTACTCCCCAGCCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: CTVPRSSAPRLFLRR*LSALLARSTPQPKS
Trigger: TGACTTTGGCTGGGGAGTACTTCTTGCAAGCAGAGCTGACAAGCAACGTCTTAAAAACAGGCGTGGTGCGCTGCTGCGTGGGACAGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
CDS CCA 90 bp CCTGACAGCTGTCCTGGCCAACAGAATTGCTTTTGGCCATGTCATTaGTGCACGGCTGCTTGCCTGCTAGGAAGAACTCAGGGATGCATC +
Preference number: 5 (lower is better)
Translates to: PDSCPGQQNCFWPCH*CTAACLLGRTQGCI
Trigger: GATGCATCCCTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGACAGCTGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CCA 90 bp CACCCTCAGAGTCCTGACAGCTGTCCTGGCCAACAGAATTGCTTTTaGCCATGTCATTGGTGCACGGCTGCTTGCCTGCTAGGAAGAACT +
Preference number: 5 (lower is better)
Translates to: HPQSPDSCPGQQNCF*PCHWCTAACLLGRT
Trigger: AGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGACAGCTGTCAGGACTCTGAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATTGTTCATGTGTAAGTaGGATGGTTTTCTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGELFMCK*DGFLAW
Trigger: CCAGGCAAGAAAACCATCCAACTTACACATGAACAA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCATTCAGAATCAGCTGTaGTTCATGTGTAAGTTGGAT +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVIQNQL*FMCKLD
Trigger: ATCCAACTTACACATGAACAACAGCTGATTCTGAAT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTTTGCGATGCTCTTGTaGAATGTCACATACAGAAAC +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENFAMLL*NVTYRN
Trigger: GTTTCTGTATGTGACATTCAACAAGAGCATCGCAAA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTTTGCGATGCTCTTGTaGAATGTCACATACAGAAAC +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAFAMLL*NVTYRN
Trigger: GTTTCTGTATGTGACATTCAACAAGAGCATCGCAAA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTTGTCATGAAGGGTGTTAACTaGAAGAGATTCAACTTCTTC +
Preference number: 5 (lower is better)
Translates to: SRGVLGKLLCTAENVRLVMKGVN*KRFNFF
Trigger: GAAGAAGTTGAATCTCTTCAAGTTAACACCCTTCAT...GACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGATGTTTTCCAATGATTaGGTCATGATGAGACGCTTC +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAMFSND*VMMRRF
Trigger: GAAGCGTCTCATCATGACCAAATCATTGGAAAACAT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS GCA 90 bp AAACATGCACAGTGTCAAACTCCAGGCCTTTGGCTTTGTGCACAGTaGCCAGAATGTACTCTGAGGTTGGGAGTTCGAGACCAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: KHAQCQTPGLWLCAQ*PECTLRLGVRDQPG
Trigger: GCCAGGCTGGTCTCGAACTCCCAACCTCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397269.7
ENST00000461504.5
CDS CCA 90 bp CGACGCTATCACTTGGGGCCCACGTGGAAGTATCAACGTATAAATTaGCCCAGGCAGACAGAAGGATGCAGGGGAAGACAGTCTATGGGA +
Preference number: 5 (lower is better)
Translates to: RRYHLGPTWKYQRIN*PRQTEGCRGRQSMG
Trigger: TCCCATAGACTGTCTTCCCCTGCATCCTTCTGTCTGCCTGGGCCAATTTATACGTTGATACTTCCACGTGGGCCCCAAGTGATAGCGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGATTCAGAATCAGCTGTaGTTCATGTGTAAGTTGGAT +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAIQNQL*FMCKLD
Trigger: ATCCAACTTACACATGAACAACAGCTGATTCTGAAT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAATTTGCGATGCTCTTGTaGAATGTCACATACAGAAAC +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEFAMLL*NVTYRN
Trigger: GTTTCTGTATGTGACATTCAACAAGAGCATCGCAAA...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGATGAAGGGTGTTAACTaGAAGAGATTCAACTTCTTC +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAMKGVN*KRFNFF
Trigger: GAAGAAGTTGAATCTCTTCAAGTTAACACCCTTCAT...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp GCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGTTTTTCCTGACTCTCTaGCAAACATCCAAGATAGTA +
Preference number: 5 (lower is better)
Translates to: AFFTRGPRQAALHCGERAFFLTL*QTSKIV
Trigger: TACTATCTTGGATGTTTGCAAGAGAGTCAGGAAAAA...CGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS-3UTR CAA 90 bp CGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACTTTTTCCTGACTCTCTaGCAAACATCCAAGATAGTA +
Preference number: 5 (lower is better)
Translates to: RWLSSRGVLGKLLCTAENFFLTL*QTSKIV
Trigger: TACTATCTTGGATGTTTGCAAGAGAGTCAGGAAAAA...GTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS TCA 90 bp CGTTGCTGGGGAAGACGCGTTCGGCCTGCTTTGCGATGCTCTTGTTaGATGTCACATACAGAAACCTGCTCTGAGACCACTTCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: RCWGRRVRPALRCSC*MSHTETCSETTSLH
Trigger: ATGCAGAGAAGTGGTCTCAGAGCAGGTTTCTGTATGTGACATTCAACAAGAGCATCGCAAAGCAGGCCGAACGCGTCTTCCCCAGCAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000460453.1
CDS TCA 90 bp CTCGCACTACAGCAGTGGGGCTGGGTAGCTGCAACAGAGATCATGTaGCTTGCAGAGTCCGAAATCTTTACTGCCTGGCCCTTTACAGAA +
Preference number: 5 (lower is better)
Translates to: LALQQWGWVAATEIM*LAESEIFTAWPFTE
Trigger: TTCTGTAAAGGGCCAGGCAGTAAAGATTTCGGACTCTGCAAGTCACATGATCTCTGTTGCAGCTACCCAGCCCCACTGCTGTAGTGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470353.1
CDS GCA 90 bp GGCCAACAGAATTGCTTTTGGCCATGTCATTGGTGCACGGCTGCTTaGCTGCTAGGAAGAACTCAGGGATGCATCTTTGACTTCCCTGAC +
Preference number: 5 (lower is better)
Translates to: GQQNCFWPCHWCTAA*LLGRTQGCIFDFPD
Trigger: GTCAGGGAAGTCAAAGATGCATCCCTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS GCA 90 bp GACAGCTGTCCTGGCCAACAGAATTGCTTTTGGCCATGTCATTGGTaGACGGCTGCTTGCCTGCTAGGAAGAACTCAGGGATGCATCTTT +
Preference number: 5 (lower is better)
Translates to: DSCPGQQNCFWPCHW*TAACLLGRTQGCIF
Trigger: AAAGATGCATCCCTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGACAGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS GCA 90 bp GTGCTGACCAGCTCACTTTTCCACATGTCTGTGACAAAGGCCAGGTaGCTGAACACTTACTCTCCCCGGCAAGGATGTGTTCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: VLTSSLFHMSVTKAR*LNTYSPRQGCVLLE
Trigger: TTCCAGAAGAACACATCCTTGCCGGGGAGAGTAAGTGTTCAGGCACCTGGCCTTTGTCACAGACATGTGGAAAAGTGAGCTGGTCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479433.5
CDS CCA 90 bp TGGGACCAGTGTTGGAAAGAGACTGAGGCTCCTGTGAGGAGGATCTaGAAAAATCTGTCAGTACCTATGAAAACAGGAGGCCCGAGGCAC +
Preference number: 5 (lower is better)
Translates to: WDQCWKETEAPVRRI*KNLSVPMKTGGPRH
Trigger: GTGCCTCGGGCCTCCTGTTTTCATAGGTACTGACAGATTTTTCCAGATCCTCCTCACAGGAGCCTCAGTCTCTTTCCAACACTGGTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS-3UTR CAA 90 bp TCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAAATGAAGGGTGTTAACTaGAAGAGATTCAACTTCTTC +
Preference number: 5 (lower is better)
Translates to: SLAFFTRGPRQAALHCGEMKGVN*KRFNFF
Trigger: GAAGAAGTTGAATCTCTTCAAGTTAACACCCTTCAT...TTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS TCA 90 bp AAGTCATCCTCAATTGAACTGAATCACCAGTACACTTTCCTCCAGTaGAATAACATGCCGCCTTCTCCCGCAGCCTCCAGACCTACCCCG +
Preference number: 5 (lower is better)
Translates to: KSSSIELNHQYTFLQ*NNMPPSPAASRPTP
Trigger: CGGGGTAGGTCTGGAGGCTGCGGGAGAAGGCGGCATGTTATTTCACTGGAGGAAAGTGTACTGGTGATTCAGTTCAATTGAGGATGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494526.1
CDS GCA 90 bp GGTTTTGCAGATGACGTTGCTGGGGAAGACGCGTTCGGCCTGCTTTaGGATGCTCTTGTTGAATGTCACATACAGAAACCTGCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: GFADDVAGEDAFGLL*DALVECHIQKPALR
Trigger: TCTCAGAGCAGGTTTCTGTATGTGACATTCAACAAGAGCATCGCAAAGCAGGCCGAACGCGTCTTCCCCAGCAACGTCATCTGCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000460453.1
CDS GCA 90 bp TGGAAGGTTTTGCAGATGACGTTGCTGGGGAAGACGCGTTCGGCCTaGTTTGCGATGCTCTTGTTGAATGTCACATACAGAAACCTGCTC +
Preference number: 5 (lower is better)
Translates to: WKVLQMTLLGKTRSA*FAMLLLNVTYRNLL
Trigger: GAGCAGGTTTCTGTATGTGACATTCAACAAGAGCATCGCAAAGCAGGCCGAACGCGTCTTCCCCAGCAACGTCATCTGCAAAACCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000460453.1
CDS GCA 90 bp TGGTGCCAACACAAGAACCCGGGTCTCCTGACTCCCCTAGTCCAGTaGACTTCCTACTGTGACATTCTTCACTCTGTATCTAGACACCTT +
Preference number: 5 (lower is better)
Translates to: WCQHKNPGLLTPLVQ*TSYCDILHSVSRHL
Trigger: AAGGTGTCTAGATACAGAGTGAAGAATGTCACAGTAGGAAGTGCACTGGACTAGGGGAGTCAGGAGACCCGGGTTCTTGTGTTGGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379999.6
CDS TCA 90 bp GGATGCAGGGGAAGACAGTCTATGGGACCAGTGTTGGAAAGAGACTaGGGCTCCTGTGAGGAGGATCTGGAAAAATCTGTCAGTACCTAT +
Preference number: 5 (lower is better)
Translates to: GCRGRQSMGPVLERD*GSCEEDLEKSVSTY
Trigger: ATAGGTACTGACAGATTTTTCCAGATCCTCCTCACAGGAGCCTCAGTCTCTTTCCAACACTGGTCCCATAGACTGTCTTCCCCTGCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS GCA 90 bp AGGTTATGCCGGGCACAAGGCACTTTCACAAAATCATCCAAAACATaGACAGTGTCAAACTCCAGGCCTTTGGCTTTGTGCACAGTGCCC +
Preference number: 5 (lower is better)
Translates to: RLCRAQGTFTKSSKT*TVSNSRPLALCTVP
Trigger: GGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATGATTTTGTGAAAGTGCCTTGTGCCCGGCATAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000485290.1
ENST00000496013.5
CDS CCA 90 bp GAAAAGCGCTATAGAAATGCTCGACGCTATCACTTGGGGCCCACGTaGAAGTATCAACGTATAAATTGGCCCAGGCAGACAGAAGGATGC +
Preference number: 5 (lower is better)
Translates to: EKRYRNARRYHLGPT*KYQRINWPRQTEGC
Trigger: GCATCCTTCTGTCTGCCTGGGCCAATTTATACGTTGATACTTCCACGTGGGCCCCAAGTGATAGCGTCGAGCATTTCTATAGCGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS GCA 90 bp CCTTTGCACCAGCTCTGGAATCCTGATGTTATACTTTTCAACAACTaGGATCTTGGCTTCAAGCTCCTTGTCCTCGGCAGCGGTCACATA +
Preference number: 5 (lower is better)
Translates to: PLHQLWNPDVILFNN*DLGFKLLVLGSGHI
Trigger: TATGTGACCGCTGCCGAGGACAAGGAGCTTGAAGCCAAGATCGCAGTTGTTGAAAAGTATAACATCAGGATTCCAGAGCTGGTGCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000485290.1
CDS TCA 90 bp TGCTTTGCGATGCTCTTGTTGAATGTCACATACAGAAACCTGCTCTaGGACCACTTCTCTGCATACTTGACCAGCGTTGAGGTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: CFAMLLLNVTYRNLL*DHFSAYLTSVEVFP
Trigger: TGGGAAGACCTCAACGCTGGTCAAGTATGCAGAGAAGTGGTCTCAGAGCAGGTTTCTGTATGTGACATTCAACAAGAGCATCGCAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000460453.1
CDS TCA 90 bp ACCATGACTCTCTGTCCTTGGCTGTTCTTACACCAAATAGGCACGTaGTCAATGGTCAGCTCTTCGTCAGCCGAGGCAAAGAAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: TMTLCPWLFLHQIGT*SMVSSSSAEAKKFS
Trigger: AGAAAACTTCTTTGCCTCGGCTGACGAAGAGCTGACCATTGATCACGTGCCTATTTGGTGTAAGAACAGCCAAGGACAGAGAGTCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS GCA 90 bp TCTATGCCACAGTTAGACAGGATGCCGTCCACTTTGCTGACAGCTTaGTCTTCATTCATCAGGTATCGATGGTACAGCTTCTTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: SMPQLDRMPSTLLTA*SSFIRYRWYSFFQG
Trigger: TCCTTGGAAGAAGCTGTACCATCGATACCTGATGAATGAAGAGCAAGCTGTCAGCAAAGTGGACGGCATCCTGTCTAACTGTGGCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000469009.5
ENST00000470089.5
ENST00000494526.1
CDS CCA 90 bp CCGCTTAAACCGTCTCACTGTAATTCTGTAAGAAAGTCACTGACTTaGTTAGGCCTCCACTTCCCCACCTGTAAAACCCTACTGATGCCT +
Preference number: 5 (lower is better)
Translates to: PLKPSHCNSVRKSLT*LGLHFPTCKTLLMP
Trigger: AGGCATCAGTAGGGTTTTACAGGTGGGGAAGTGGAGGCCTAACCAAGTCAGTGACTTTCTTACAGAATTACAGTGAGACGGTTTAAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462507.1
CDS CCA 90 bp TGCACCAAGGCCAGGTGGGTACTCACGTTTCCTCCGTTCTTCCTCTaGCTGAAGAAGGATCCAAATATCAATGATTCTGTCCAATCCAAA +
Preference number: 5 (lower is better)
Translates to: CTKARWVLTFPPFFL*LKKDPNINDSVQSK
Trigger: TTTGGATTGGACAGAATCATTGATATTTGGATCCTTCTTCAGCCAGAGGAAGAACGGAGGAAACGTGAGTACCCACCTGGCCTTGGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS TCA 90 bp CCAAGGCCAGGTGGGTACTCACGTTTCCTCCGTTCTTCCTCTGGCTaGAGAAGGATCCAAATATCAATGATTCTGTCCAATCCAAATGAT +
Preference number: 5 (lower is better)
Translates to: PRPGGYSRFLRSSSG*RRIQISMILSNPND
Trigger: ATCATTTGGATTGGACAGAATCATTGATATTTGGATCCTTCTTCAGCCAGAGGAAGAACGGAGGAAACGTGAGTACCCACCTGGCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS GCA 90 bp TCATCCAAAACATGCACAGTGTCAAACTCCAGGCCTTTGGCTTTGTaGACAGTGCCCAGAATGTACTCTAGGATAAAAACACAGCACACG +
Preference number: 5 (lower is better)
Translates to: SSKTCTVSNSRPLAL*TVPRMYSRIKTQHT
Trigger: CGTGTGCTGTGTTTTTATCCTAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496013.5
CDS CCA 90 bp TCACAAAATCATCCAAAACATGCACAGTGTCAAACTCCAGGCCTTTaGCTTTGTGCACAGTGCCCAGAATGTACTCTGAGGTTGGGAGTT +
Preference number: 5 (lower is better)
Translates to: SQNHPKHAQCQTPGL*LCAQCPECTLRLGV
Trigger: AACTCCCAACCTCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATGATTTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397269.7
ENST00000461504.5
CDS GCA 90 bp AGCTGCAACAGAGATCATGTGACTTGCAGAGTCCGAAATCTTTACTaGCTGGCCCTTTACAGAAAAAGTCTACAGACGATCCATGTGCTT +
Preference number: 5 (lower is better)
Translates to: SCNRDHVTCRVRNLY*LALYRKSLQTIHVL
Trigger: AAGCACATGGATCGTCTGTAGACTTTTTCTGTAAAGGGCCAGGCAGTAAAGATTTCGGACTCTGCAAGTCACATGATCTCTGTTGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470353.1
CDS TCA 90 bp TATAGCAAGACACCGTCTCCCAGCCAAAGTCAAAATGTTTTCCAATaGTTTGGTCATGATGAGACGCTTCTTGGCTCGAGTTACTGCAAC +
Preference number: 5 (lower is better)
Translates to: YSKTPSPSQSQNVFQ*FGHDETLLGSSYCN
Trigger: GTTGCAGTAACTCGAGCCAAGAAGCGTCTCATCATGACCAAATCATTGGAAAACATTTTGACTTTGGCTGGGAGACGGTGTCTTGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479433.5
CDS GCA 90 bp TCATCCAAAACATGCACAGTGTCAAACTCCAGGCCTTTGGCTTTGTaGACAGTGCCCAGAATGTACTCTGCAAAGTCCAAATCTTCTATA +
Preference number: 5 (lower is better)
Translates to: SSKTCTVSNSRPLAL*TVPRMYSAKSKSSI
Trigger: TATAGAAGATTTGGACTTTGCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000485290.1
CDS TCA 90 bp TCAGCAAACTACACGTGGGCCACATCCAGACAATGGCCGTTTTTGTaGATTAATTTTACTGGAACACAGCCATACTTGTTCACTAATGTA +
Preference number: 5 (lower is better)
Translates to: SANYTWATSRQWPFL*INFTGTQPYLFTNV
Trigger: TACATTAGTGAACAAGTATGGCTGTGTTCCAGTAAAATTAATTCACAAAAACGGCCATTGTCTGGATGTGGCCCACGTGTAGTTTGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470353.1
CDS TCA 90 bp CTGAACTTTAAGCAAGTCATTTTGACTTTCTGTGCCTCACTTCCATaGGAACACCCCTCTTGGCAAGACGGCATTATATGTAAACAATAT +
Preference number: 5 (lower is better)
Translates to: LNFKQVILTFCASLP*EHPSWQDGIICKQY
Trigger: ATATTGTTTACATATAATGCCGTCTTGCCAAGAGGGGTGTTCTCATGGAAGTGAGGCACAGAAAGTCAAAATGACTTGCTTAAAGTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460453.1
CDS CCA 90 bp GTCCAAATCTTCTATATGGCATTTTTCTATCCTTTGCACCAGCTCTaGAATCCTGATGTTATACTTTTCAACAACTGCGATCTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: VQIFYMAFFYPLHQL*NPDVILFNNCDLGF
Trigger: GAAGCCAAGATCGCAGTTGTTGAAAAGTATAACATCAGGATTCCAGAGCTGGTGCAAAGGATAGAAAAATGCCATATAGAAGATTTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000485290.1
CDS CCA 72 bp GTCCCCCGGCAGCGAGCTCCTCCTCTGGCCGGGACCTaGAGCCCGAGACGCCCGCCGACTTCCTCCGCGAGC +
Preference number: 6 (lower is better)
Translates to: VPRQRAPPLAGT*SPRRPPTSSAS
Trigger: GCTCGCGGAGGAAGTCGGCGGGCGTCTCGGGCTCCAGGTCCCGGCCAGAGGAGGAGCTCGCTGCCGGGGGAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397269.7
CDS GCA 72 bp GCTCCGGGGAGGCTGTCAGGAACGCCAGGGGCCCGATaGGCTGCTCCGCACAGGAGTGGCAGAGGTAGCCCC +
Preference number: 6 (lower is better)
Translates to: APGRLSGTPGAR*AAPHRSGRGSP
Trigger: GGGGCTACCTCTGCCACTCCTGTGCGGAGCAGCGCATCGGGCCCCTGGCGTTCCTGACAGCCTCCCCGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS GCA 72 bp ACGATGTTCTCCACAGTGCGCTCCATGGCGCGCACCTaGTCCGGGGAGGCTGTCAGGAACGCCAGGGGCCCG +
Preference number: 6 (lower is better)
Translates to: TMFSTVRSMART*SGEAVRNARGP
Trigger: CGGGCCCCTGGCGTTCCTGACAGCCTCCCCGGAGCAGGTGCGCGCCATGGAGCGCACTGTGGAGAACATCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS GCA 72 bp GGGCCTCATGCCGGGGCAGTACGATGTTCTCCACAGTaGGCTCCATGGCGCGCACCTGCTCCGGGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GPHAGAVRCSPQ*APWRAPAPGRL
Trigger: CAGCCTCCCCGGAGCAGGTGCGCGCCATGGAGCGCACTGTGGAGAACATCGTACTGCCCCGGCATGAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS CCA 72 bp GCCGGGGCAGTACGATGTTCTCCACAGTGCGCTCCATaGCGCGCACCTGCTCCGGGGAGGCTGTCAGGAACG +
Preference number: 6 (lower is better)
Translates to: AGAVRCSPQCAP*RAPAPGRLSGT
Trigger: CGTTCCTGACAGCCTCCCCGGAGCAGGTGCGCGCCATGGAGCGCACTGTGGAGAACATCGTACTGCCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS CAA 90 bp GCGGGGTCCTCGGCAAGCTGCTCTGCACTGCGGAGAACGTGCGCCTaGTCCTCAGAAGACGAGGAAGAGCAGGGCCTCATGCCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: AGSSASCSALRRTCA*SSEDEEEQGLMPGQ
Trigger: CTGCCCCGGCATGAGGCCCTGCTCTTCCTCGTCTTCTGAGGACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000481029.1
CDS GCA 72 bp GGAGGCAGAAGAGCAGTCGCTGGATGTCATTCACACTaGTGGAGAGGAGCACCACAGCCGCCACCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: GGRRAVAGCHSH*WRGAPQPPPGP
Trigger: GGGCCCTGGTGGCGGCTGTGGTGCTCCTCTCCAGCAGTGTGAATGACATCCAGCGACTGCTCTTCTGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS GCA 72 bp CTCGCTGGCTTTCTTCACGCGGGGTCCTCGGCAAGCTaGTCTGCACTGCGGAGAACGTGCGCCTTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: LAGFLHAGSSAS*SALRRTCALSS
Trigger: TGAGGACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAAAGCCAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000481029.1
CDS GCA 72 bp TTCTTCACGCGGGGTCCTCGGCAAGCTGCTCTGCACTaGGGAGAACGTGCGCCTTGTCCTCAGAAGACGAGG +
Preference number: 6 (lower is better)
Translates to: FFTRGPRQAALH*GERAPCPQKTR
Trigger: CCTCGTCTTCTGAGGACAAGGCGCACGTTCTCCGCAGTGCAGAGCAGCTTGCCGAGGACCCCGCGTGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000481029.1
CDS GCA 72 bp GGGCCTCATGCCGGGGCAGTACGATGTTCTCCACAGTaGGCTCCATGGCGCGCACCTCTTGTGCCTCTCATA +
Preference number: 6 (lower is better)
Translates to: GPHAGAVRCSPQ*APWRAPLVPLI
Trigger: TATGAGAGGCACAAGAGGTGCGCGCCATGGAGCGCACTGTGGAGAACATCGTACTGCCCCGGCATGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481029.1
CDS CCA 72 bp CCCCTTCCGTCACCCGTACGGCCTCATCAAACACGTTaGCGTTGGTCCGGGACAACAAGGCCACTTGCCCCT +
Preference number: 6 (lower is better)
Translates to: PLPSPVRPHQTR*RWSGTTRPLAP
Trigger: AGGGGCAAGTGGCCTTGTTGTCCCGGACCAACGCCAACGTGTTTGATGAGGCCGTACGGGTGACGGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000475867.5
CDS CAA 72 bp TCCCCTTCCGTCACCCGTACGGCCTCATCAAACACGTaGGCGTTGGTCCGGGACAACAAGGCCACTTGCCCC +
Preference number: 6 (lower is better)
Translates to: SPSVTRTASSNT*ALVRDNKATCP
Trigger: GGGGCAAGTGGCCTTGTTGTCCCGGACCAACGCCAACGTGTTTGATGAGGCCGTACGGGTGACGGAAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000475867.5
CDS GCA 72 bp CCTTGTCCTCAGAAGACGAGGAAGAGCAGGGCCTCATaGCGGGGCAGTACGATGTTCTCCACAGTGCGCTCC +
Preference number: 6 (lower is better)
Translates to: PCPQKTRKSRAS*RGSTMFSTVRS
Trigger: GGAGCGCACTGTGGAGAACATCGTACTGCCCCGGCATGAGGCCCTGCTCTTCCTCGTCTTCTGAGGACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000481029.1
CDS CCA 72 bp AAGCACGGCTATGCAGTACAGGGTCTCGGTGACATCTaGCATGGTCACCGTGGAGCTGGGTCTCCGGAGGCA +
Preference number: 6 (lower is better)
Translates to: KHGYAVQGLGDI*HGHRGAGSPEA
Trigger: TGCCTCCGGAGACCCAGCTCCACGGTGACCATGCCAGATGTCACCGAGACCCTGTACTGCATAGCCGTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS CCA 72 bp CCGTCACCCGTACGGCCTCATCAAACACGTTGGCGTTaGTCCGGGACAACAAGGCCACTTGCCCCTTTGCGT +
Preference number: 6 (lower is better)
Translates to: PSPVRPHQTRWR*SGTTRPLAPLR
Trigger: ACGCAAAGGGGCAAGTGGCCTTGTTGTCCCGGACCAACGCCAACGTGTTTGATGAGGCCGTACGGGTGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000475867.5
CDS CAA 72 bp TCCGTCACCCGTACGGCCTCATCAAACACGTTGGCGTaGGTCCGGGACAACAAGGCCACTTGCCCCTTTGCG +
Preference number: 6 (lower is better)
Translates to: SVTRTASSNTLA*VRDNKATCPFA
Trigger: CGCAAAGGGGCAAGTGGCCTTGTTGTCCCGGACCAACGCCAACGTGTTTGATGAGGCCGTACGGGTGACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000475867.5
CDS GCA 72 bp TCTGGAGGGAAACGGGTCCCTGACTCAGACTGGGCCTaGTTCTTTCTCGTCCCTGTCACTTGGGTGCGTCCT +
Preference number: 6 (lower is better)
Translates to: SGGKRVPDSDWA*FFLVPVTWVRP
Trigger: AGGACGCACCCAAGTGACAGGGACGAGAAAGAAGCAGGCCCAGTCTGAGTCAGGGACCCGTTTCCCTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS CCA 72 bp TCAGGAATGGGATCAGGACCCACGTCCCCAGCATCTTaGTCGGTTTCACCAGACTCCGCAGAGAGCCGAGAC +
Preference number: 6 (lower is better)
Translates to: SGMGSGPTSPAS*SVSPDSAESRD
Trigger: GTCTCGGCTCTCTGCGGAGTCTGGTGAAACCGACCAAGATGCTGGGGACGTGGGTCCTGATCCCATTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CCA 72 bp ACGTGCCTCAGGACCTCACTAGGCAGGCTGCAAATGTaGCTCAGTGCTTCCTGGCAGGGCAAGGTCCCAAGA +
Preference number: 6 (lower is better)
Translates to: TCLRTSLGRLQM*LSASWQGKVPR
Trigger: TCTTGGGACCTTGCCCTGCCAGGAAGCACTGAGCCACATTTGCAGCCTGCCTAGTGAGGTCCTGAGGCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CCA 72 bp TCAGACTGGGCCTGCTTCTTTCTCGTCCCTGTCACTTaGGTGCGTCCTTCCAATGCACCAAGGCCAGGTGGG +
Preference number: 6 (lower is better)
Translates to: SDWACFFLVPVT*VRPSNAPRPGG
Trigger: CCCACCTGGCCTTGGTGCATTGGAAGGACGCACCCAAGTGACAGGGACGAGAAAGAAGCAGGCCCAGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS CAA 72 bp GTCAGGAATGGGATCAGGACCCACGTCCCCAGCATCTaGGTCGGTTTCACCAGACTCCGCAGAGAGCCGAGA +
Preference number: 6 (lower is better)
Translates to: VRNGIRTHVPSI*VGFTRLRREPR
Trigger: TCTCGGCTCTCTGCGGAGTCTGGTGAAACCGACCAAGATGCTGGGGACGTGGGTCCTGATCCCATTCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CAA 72 bp CTCAGACTGGGCCTGCTTCTTTCTCGTCCCTGTCACTaGGGTGCGTCCTTCCAATGCACCAAGGCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: LRLGLLLSRPCH*GASFQCTKARW
Trigger: CCACCTGGCCTTGGTGCATTGGAAGGACGCACCCAAGTGACAGGGACGAGAAAGAAGCAGGCCCAGTCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS CAA 90 bp GAAGGGAATTCCCCTTCCGTCACCCGTACGGCCTCATCAAACACGTaGGCGTTGGTCCGGGACAACAAGGCCACTTGCCCCTTTGCGTCA +
Preference number: 6 (lower is better)
Translates to: EGNSPSVTRTASSNT*ALVRDNKATCPFAS
Trigger: TGACGCAAAGGGGCAAGTGGCCTTGTTGTCCCGGACCAACGCCAACGTGTTTGATGAGGCCGTACGGGTGACGGAAGGGGAATTCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000475867.5
CDS CAA 90 bp AATTCCCCTTCCGTCACCCGTACGGCCTCATCAAACACGTTGGCGTaGGTCCGGGACAACAAGGCCACTTGCCCCTTTGCGTCACCTCTA +
Preference number: 6 (lower is better)
Translates to: NSPSVTRTASSNTLA*VRDNKATCPFASPL
Trigger: TAGAGGTGACGCAAAGGGGCAAGTGGCCTTGTTGTCCCGGACCAACGCCAACGTGTTTGATGAGGCCGTACGGGTGACGGAAGGGGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000475867.5
CDS TCA 72 bp TTCCTGGCAGGGCAAGGTCCCAAGAAGCCCATAGTATaGGTCAGGAATGGGATCAGGACCCACGTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: FLAGQGPKKPIV*VRNGIRTHVPS
Trigger: GCTGGGGACGTGGGTCCTGATCCCATTCCTGACTCATACTATGGGCTTCTTGGGACCTTGCCCTGCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS GCA 72 bp CAGGACCTCACTAGGCAGGCTGCAAATGTGGCTCAGTaGTTCCTGGCAGGGCAAGGTCCCAAGAAGCCCATA +
Preference number: 6 (lower is better)
Translates to: QDLTRQAANVAQ*FLAGQGPKKPI
Trigger: TATGGGCTTCTTGGGACCTTGCCCTGCCAGGAAGCACTGAGCCACATTTGCAGCCTGCCTAGTGAGGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS GCA 72 bp AGTAGCCGTCATGAGTCATCTGGTGCGCCTCTTCTGTaGACTCCCCCAGCTTCCGCATGTTATCCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: SSRHESSGAPLL*TPPASACYPRG
Trigger: GCCTCTGGGATAACATGCGGAAGCTGGGGGAGTGCACAGAAGAGGCGCACCAGATGACTCATGACGGCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000489042.1
CDS GCA 72 bp TGCACGGCTGCTTGCCTGCTAGGAAGAACTCAGGGATaGATCTTTGACTTCCCTGACTGTGGCGCTCCGGAC +
Preference number: 6 (lower is better)
Translates to: CTAACLLGRTQG*IFDFPDCGAPD
Trigger: GTCCGGAGCGCCACAGTCAGGGAAGTCAAAGATGCATCCCTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470089.5
CDS GCA 72 bp TGCACGGCTGCTTGCCTGCTAGGAAGAACTCAGGGATaGATCTTTGACTTCCCTGACCTCGGCCTCCCGCAA +
Preference number: 6 (lower is better)
Translates to: CTAACLLGRTQG*IFDFPDLGLPQ
Trigger: TTGCGGGAGGCCGAGGTCAGGGAAGTCAAAGATGCATCCCTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469009.5
CDS GCA 72 bp ACTGGGCCTGCTTCTTTCTCGTCCCTGTCACTTGGGTaGGTCCTTCCAATGCACCAAGGCCAGGTGGGTACT +
Preference number: 6 (lower is better)
Translates to: TGPASFSSLSLG*VLPMHQGQVGT
Trigger: AGTACCCACCTGGCCTTGGTGCATTGGAAGGACGCACCCAAGTGACAGGGACGAGAAAGAAGCAGGCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS CAA 90 bp GGCCTCATCAAACACGTTGGCGTTGGTCCGGGACAACAAGGCCACTaGCCCCTTTGCGTCACCTCTAATGCCACTCTGATGGTTTCCTCC +
Preference number: 6 (lower is better)
Translates to: GLIKHVGVGPGQQGH*PLCVTSNATLMVSS
Trigger: GGAGGAAACCATCAGAGTGGCATTAGAGGTGACGCAAAGGGGCAAGTGGCCTTGTTGTCCCGGACCAACGCCAACGTGTTTGATGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS TCA 72 bp AAGTCAGTGCAGTGCAGTAGCCTCTCCGTCTCCGACTaGGGAGCAAAGCCCTCGGCTCAAGATCCTCACCTA +
Preference number: 6 (lower is better)
Translates to: KSVQCSSLSVSD*GAKPSAQDPHL
Trigger: TAGGTGAGGATCTTGAGCCGAGGGCTTTGCTCCTCAGTCGGAGACGGAGAGGCTACTGCACTGCACTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS GCA 72 bp GCCTCCCTAGGCCTTGTGCATGGCACAGACAAATGGTaGCGTGGAGCTTTCTTAGAAACTCCATCCCACCGG +
Preference number: 6 (lower is better)
Translates to: ASLGLVHGTDKW*RGAFLETPSHR
Trigger: CCGGTGGGATGGAGTTTCTAAGAAAGCTCCACGGCACCATTTGTCTGTGCCATGCACAAGGCCTAGGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS GCA 72 bp AACCCAGAGTTTGAGACCCTGGCAAAGGCAGCACCCTaGGGTCACACTGTCAACTCCCATACAGCAGTGGAG +
Preference number: 6 (lower is better)
Translates to: NPEFETLAKAAP*GHTVNSHTAVE
Trigger: CTCCACTGCTGTATGGGAGTTGACAGTGTGACCGCAGGGTGCTGCCTTTGCCAGGGTCTCAAACTCTGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489042.1
CDS CCA 72 bp TTAGAAACTCCATCCCACCGGCTGGTCCCGGTAGCCTaGTTACTCTCTTCCTCAGAGGACCAAGACCGCTTC +
Preference number: 6 (lower is better)
Translates to: LETPSHRLVPVA*LLSSSEDQDRF
Trigger: GAAGCGGTCTTGGTCCTCTGAGGAAGAGAGTAACCAGGCTACCGGGACCAGCCGGTGGGATGGAGTTTCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CCA 72 bp GCAAGGTCCCAAGAAGCCCATAGTATGAGTCAGGAATaGGATCAGGACCCACGTCCCCAGCATCTTGGTCGG +
Preference number: 6 (lower is better)
Translates to: ARSQEAHSMSQE*DQDPRPQHLGR
Trigger: CCGACCAAGATGCTGGGGACGTGGGTCCTGATCCCATTCCTGACTCATACTATGGGCTTCTTGGGACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CCA 72 bp CGTCTCATTTCAGCGTGCTCTGTGAAGACCAGCAAGTaGGCACTCGTCCTCTGGCATCTCCTGTGGAGATGG +
Preference number: 6 (lower is better)
Translates to: RLISACSVKTSK*ALVLWHLLWRW
Trigger: CCATCTCCACAGGAGATGCCAGAGGACGAGTGCCCACTTGCTGGTCTTCACAGAGCACGCTGAAATGAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379999.6
CDS CAA 72 bp TTCATGGTAAGGACGGTGTCAACAGGGATGGCATTGTaGCACTGTCCCACGCAGCAGCGCACCACGCCTGTT +
Preference number: 6 (lower is better)
Translates to: FMVRTVSTGMAL*HCPTQQRTTPV
Trigger: AACAGGCGTGGTGCGCTGCTGCGTGGGACAGTGCAACAATGCCATCCCTGTTGACACCGTCCTTACCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
CDS CAA 90 bp GGCAGCTTCTTCATGGTAAGGACGGTGTCAACAGGGATGGCATTGTaGCACTGTCCCACGCAGCAGCGCACCACGCCTGTTTTTAAGACG +
Preference number: 6 (lower is better)
Translates to: GSFFMVRTVSTGMAL*HCPTQQRTTPVFKT
Trigger: CGTCTTAAAAACAGGCGTGGTGCGCTGCTGCGTGGGACAGTGCAACAATGCCATCCCTGTTGACACCGTCCTTACCATGAAGAAGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
CDS TCA 72 bp CAGCAGTGGGGCTGGGTAGCTGCAACAGAGATCATGTaGCTTGCAGAGTCCGAAATCTTTACTGCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: QQWGWVAATEIM*LAESEIFTAWP
Trigger: GGGCCAGGCAGTAAAGATTTCGGACTCTGCAAGTCACATGATCTCTGTTGCAGCTACCCAGCCCCACTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470353.1
CDS GCA 72 bp CTCCGAGCCAAATGCTGGCAGTCAATGGCAGTAAGATaGTTCCGCTTAAACCGTCTCATGTGGCGCTCCGGA +
Preference number: 6 (lower is better)
Translates to: LRAKCWQSMAVR*FRLNRLMWRSG
Trigger: TCCGGAGCGCCACATGAGACGGTTTAAGCGGAAGCATCTTACTGCCATTGACTGCCAGCATTTGGCTCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362091.9
ENST00000397269.7
CDS GCA 72 bp CCTCAGAGTCCTGACAGCTGTCCTGGCCAACAGAATTaGTTTTGGCCATGTCATTGGTGCACGGCTGCTTGC +
Preference number: 6 (lower is better)
Translates to: PQSPDSCPGQQN*FWPCHWCTAAC
Trigger: GCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGACAGCTGTCAGGACTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS GCA 72 bp CCACGCAGCAGCGCACCACGCCTGTTTTTAAGACGTTaGTTGTCAGCTCTGCTTGCAAGAAGTACTCCCCAG +
Preference number: 6 (lower is better)
Translates to: PRSSAPRLFLRR*LSALLARSTPQ
Trigger: CTGGGGAGTACTTCTTGCAAGCAGAGCTGACAAGCAACGTCTTAAAAACAGGCGTGGTGCGCTGCTGCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
CDS CCA 72 bp CTGGCCTCCCTAGGCCTTGTGCATGGCACAGACAAATaGTGCCGTGGAGCTTTCTTAGAAACTCCATCCCAC +
Preference number: 6 (lower is better)
Translates to: LASLGLVHGTDK*CRGAFLETPSH
Trigger: GTGGGATGGAGTTTCTAAGAAAGCTCCACGGCACCATTTGTCTGTGCCATGCACAAGGCCTAGGGAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CCA 72 bp CCAGGCAGACAGAAGGATGCAGGGGAAGACAGTCTATaGGACCAGTGTTGGAAAGAGACTGAGGCTCCTGTG +
Preference number: 6 (lower is better)
Translates to: PGRQKDAGEDSL*DQCWKETEAPV
Trigger: CACAGGAGCCTCAGTCTCTTTCCAACACTGGTCCCATAGACTGTCTTCCCCTGCATCCTTCTGTCTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS CAA 72 bp AAACACGTTGGCGTTGGTCCGGGACAACAAGGCCACTaGCCCCTTTGCGTCACCTCTAATGCCACTCTGATG +
Preference number: 6 (lower is better)
Translates to: KHVGVGPGQQGH*PLCVTSNATLM
Trigger: CATCAGAGTGGCATTAGAGGTGACGCAAAGGGGCAAGTGGCCTTGTTGTCCCGGACCAACGCCAACGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000475867.5
CDS CAA 72 bp CGCAGCAGCGCACCACGCCTGTTTTTAAGACGTTGCTaGTCAGCTCTGCTTGCAAGAAGTACTCCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: RSSAPRLFLRRC*SALLARSTPQP
Trigger: TGGCTGGGGAGTACTTCTTGCAAGCAGAGCTGACAAGCAACGTCTTAAAAACAGGCGTGGTGCGCTGCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
CDS CAA 90 bp TTGCACTGTCCCACGCAGCAGCGCACCACGCCTGTTTTTAAGACGTaGCTTGTCAGCTCTGCTTGCAAGAAGTACTCCCCAGCCAAAGTC +
Preference number: 6 (lower is better)
Translates to: LHCPTQQRTTPVFKT*LVSSACKKYSPAKV
Trigger: GACTTTGGCTGGGGAGTACTTCTTGCAAGCAGAGCTGACAAGCAACGTCTTAAAAACAGGCGTGGTGCGCTGCTGCGTGGGACAGTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
CDS CAA 90 bp ATGGGCAGCTTCTTCATGGTAAGGACGGTGTCAACAGGGATGGCATaGTTGCACTGTCCCACGCAGCAGCGCACCACGCCTGTTTTTAAG +
Preference number: 6 (lower is better)
Translates to: MGSFFMVRTVSTGMA*LHCPTQQRTTPVFK
Trigger: CTTAAAAACAGGCGTGGTGCGCTGCTGCGTGGGACAGTGCAACAATGCCATCCCTGTTGACACCGTCCTTACCATGAAGAAGCTGCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
CDS GCA 72 bp TGCACGGCTGCTTGCCTGCTAGGAAGAACTCAGGGATaGATCTTTGACTTCCCTGACCCCTACTCCCTCTTT +
Preference number: 6 (lower is better)
Translates to: CTAACLLGRTQG*IFDFPDPYSLF
Trigger: AAAGAGGGAGTAGGGGTCAGGGAAGTCAAAGATGCATCCCTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
CDS GCA 72 bp CCTGGCCAACAGAATTGCTTTTGGCCATGTCATTGGTaGACGGCTGCTTGCCTGCTAGGAAGAACTCAGGGA +
Preference number: 6 (lower is better)
Translates to: PGQQNCFWPCHW*TAACLLGRTQG
Trigger: TCCCTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGTTGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS GCA 72 bp CCACAAAGATGGCGTCAAAAGAGGCCAGCGAAGGCTTaGTCAGCTGCCAGAGTTTCAAGTAGCCGTCATGAG +
Preference number: 6 (lower is better)
Translates to: PQRWRQKRPAKA*SAARVSSSRHE
Trigger: CTCATGACGGCTACTTGAAACTCTGGCAGCTGAGCAAGCCTTCGCTGGCCTCTTTTGACGCCATCTTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS CCA 72 bp AGTCCTGACAGCTGTCCTGGCCAACAGAATTGCTTTTaGCCATGTCATTGGTGCACGGCTGCTTGCCTGCTA +
Preference number: 6 (lower is better)
Translates to: SPDSCPGQQNCF*PCHWCTAACLL
Trigger: TAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGACAGCTGTCAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CAA 90 bp TCGACGCTATCACTTGGGGCCCACGTGGAAGTATCAACGTATAAATaGGCCCAGGCAGACAGAAGGATGCAGGGGAAGACAGTCTATGGG +
Preference number: 6 (lower is better)
Translates to: STLSLGAHVEVSTYK*AQADRRMQGKTVYG
Trigger: CCCATAGACTGTCTTCCCCTGCATCCTTCTGTCTGCCTGGGCCAATTTATACGTTGATACTTCCACGTGGGCCCCAAGTGATAGCGTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS TCA 72 bp TGCGCTCCATGGCGCGCACCTCTTGTGCCTCTCATATaGAAAGCCCCTAATAAAGGATCACACAGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: CAPWRAPLVPLI*KAPNKGSHSSL
Trigger: GAGAGAGCTGTGTGATCCTTTATTAGGGGCTTTTCATATGAGAGGCACAAGAGGTGCGCGCCATGGAGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481029.1
CDS GCA 72 bp CAGTGTCAAACTCCAGGCCTTTGGCTTTGTGCACAGTaGCCAGAATGTACTCTGAGGTTGGGAGTTCGAGAC +
Preference number: 6 (lower is better)
Translates to: QCQTPGLWLCAQ*PECTLRLGVRD
Trigger: GTCTCGAACTCCCAACCTCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397269.7
ENST00000461504.5
CDS GCA 72 bp GTGGGGCTGGGTAGCTGCAACAGAGATCATGTGACTTaGAGAGTCCGAAATCTTTACTGCCTGGCCCTTTAC +
Preference number: 6 (lower is better)
Translates to: VGLGSCNRDHVT*RVRNLYCLALY
Trigger: GTAAAGGGCCAGGCAGTAAAGATTTCGGACTCTGCAAGTCACATGATCTCTGTTGCAGCTACCCAGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470353.1
CDS CCA 72 bp TGTCCTGGCCAACAGAATTGCTTTTGGCCATGTCATTaGTGCACGGCTGCTTGCCTGCTAGGAAGAACTCAG +
Preference number: 6 (lower is better)
Translates to: CPGQQNCFWPCH*CTAACLLGRTQ
Trigger: CTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CCA 72 bp TCCTCAGAAAATGACTCAACTCTGAAGTGCGGAAGCTaGGGCAGGTTATGCCGGGCACAAGGCACTTTCACA +
Preference number: 6 (lower is better)
Translates to: SSENDSTLKCGS*GRLCRAQGTFT
Trigger: TGTGAAAGTGCCTTGTGCCCGGCATAACCTGCCCCAGCTTCCGCACTTCAGAGTTGAGTCATTTTCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000470353.1
ENST00000479433.5
ENST00000485290.1
ENST00000496013.5
CDS CAA 72 bp ATAGAGACCATGGTTCGGATCTCTGTTTGTCCATCTTaGACCGAAGGGCTGGGTCACAGCCAAGTGACTCCG +
Preference number: 6 (lower is better)
Translates to: IETMVRISVCPS*TEGLGHSQVTP
Trigger: CGGAGTCACTTGGCTGTGACCCAGCCCTTCGGTCAAAGATGGACAAACAGAGATCCGAACCATGGTCTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
CDS CAA 72 bp CTGTCCTGGCCAACAGAATTGCTTTTGGCCATGTCATaGGTGCACGGCTGCTTGCCTGCTAGGAAGAACTCA +
Preference number: 6 (lower is better)
Translates to: LSWPTELLLAMS*VHGCLPARKNS
Trigger: TGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CAA 90 bp ACTGTCCCACGCAGCAGCGCACCACGCCTGTTTTTAAGACGTTGCTaGTCAGCTCTGCTTGCAAGAAGTACTCCCCAGCCAAAGTCAAAA +
Preference number: 6 (lower is better)
Translates to: TVPRSSAPRLFLRRC*SALLARSTPQPKSK
Trigger: TTTTGACTTTGGCTGGGGAGTACTTCTTGCAAGCAGAGCTGACAAGCAACGTCTTAAAAACAGGCGTGGTGCGCTGCTGCGTGGGACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
CDS TCA 72 bp CTCTGTCCTTGGCTGTTCTTACACCAAATAGGCACGTaGTCAATGGTCAGCTCTTCGTCAGCCGAGGCAAAG +
Preference number: 6 (lower is better)
Translates to: LCPWLFLHQIGT*SMVSSSSAEAK
Trigger: CTTTGCCTCGGCTGACGAAGAGCTGACCATTGATCACGTGCCTATTTGGTGTAAGAACAGCCAAGGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS GCA 72 bp GATGACGTTGCTGGGGAAGACGCGTTCGGCCTGCTTTaGGATGCTCTTGTTGAATGTCACATACAGAAACCT +
Preference number: 6 (lower is better)
Translates to: DDVAGEDAFGLL*DALVECHIQKP
Trigger: AGGTTTCTGTATGTGACATTCAACAAGAGCATCGCAAAGCAGGCCGAACGCGTCTTCCCCAGCAACGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000460453.1
CDS GCA 72 bp TTGCAGATGACGTTGCTGGGGAAGACGCGTTCGGCCTaGTTTGCGATGCTCTTGTTGAATGTCACATACAGA +
Preference number: 6 (lower is better)
Translates to: LQMTLLGKTRSA*FAMLLLNVTYR
Trigger: TCTGTATGTGACATTCAACAAGAGCATCGCAAAGCAGGCCGAACGCGTCTTCCCCAGCAACGTCATCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000460453.1
CDS GCA 72 bp GACTCAACTCTGAAGTGCGGAAGCTGGGGCAGGTTATaGCGGGCACAAGGCACTTTCACAAAATCATCCAAA +
Preference number: 6 (lower is better)
Translates to: DSTLKCGSWGRL*RAQGTFTKSSK
Trigger: TTTGGATGATTTTGTGAAAGTGCCTTGTGCCCGGCATAACCTGCCCCAGCTTCCGCACTTCAGAGTTGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000470353.1
ENST00000479433.5
ENST00000485290.1
ENST00000496013.5
CDS GCA 72 bp CACAAGAACCCGGGTCTCCTGACTCCCCTAGTCCAGTaGACTTCCTACTGTGACATTCTTCACTCTGTATCT +
Preference number: 6 (lower is better)
Translates to: HKNPGLLTPLVQ*TSYCDILHSVS
Trigger: AGATACAGAGTGAAGAATGTCACAGTAGGAAGTGCACTGGACTAGGGGAGTCAGGAGACCCGGGTTCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379999.6
CDS GCA 72 bp CTCCGAGCCAAATGCTGGCAGTCAATGGCAGTAAGATaGTTCCGCTTAAACCGTCTCATTTCAGCGTGCTCT +
Preference number: 6 (lower is better)
Translates to: LRAKCWQSMAVR*FRLNRLISACS
Trigger: AGAGCACGCTGAAATGAGACGGTTTAAGCGGAAGCATCTTACTGCCATTGACTGCCAGCATTTGGCTCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379999.6
CDS GCA 72 bp AGCTCACTTTTCCACATGTCTGTGACAAAGGCCAGGTaGCTGAACACTTACTCTCCCCGGCAAGGATGTGTT +
Preference number: 6 (lower is better)
Translates to: SSLFHMSVTKAR*LNTYSPRQGCV
Trigger: AACACATCCTTGCCGGGGAGAGTAAGTGTTCAGGCACCTGGCCTTTGTCACAGACATGTGGAAAAGTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479433.5
CDS CCA 72 bp GTGGAGATAACAGCACTACACTCCTCGGGGTCACTGTaGTGTAAGCTCACATGTGATCGTCACGGGAAAACA +
Preference number: 6 (lower is better)
Translates to: VEITALHSSGSL*CKLTCDRHGKT
Trigger: TGTTTTCCCGTGACGATCACATGTGAGCTTACACCACAGTGACCCCGAGGAGTGTAGTGCTGTTATCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460453.1
CDS CCA 72 bp GAAGTAAAGCATATGGTAACCCAGAGTTTGAGACCCTaGCAAAGGCAGCACCCTGCGGTCACACTGTCAACT +
Preference number: 6 (lower is better)
Translates to: EVKHMVTQSLRP*QRQHPAVTLST
Trigger: AGTTGACAGTGTGACCGCAGGGTGCTGCCTTTGCCAGGGTCTCAAACTCTGGGTTACCATATGCTTTACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489042.1
CDS TCA 72 bp GGCTGTGTATCGTATGAGGTTCAGCACACACAGGTCTaGCTCCTTTTCTATGCCACAGTTAGACAGGATGCC +
Preference number: 6 (lower is better)
Translates to: GCVSYEVQHTQV*LLFYATVRQDA
Trigger: GGCATCCTGTCTAACTGTGGCATAGAAAAGGAGTCAGACCTGTGTGTGCTGAACCTCATACGATACACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000469009.5
ENST00000470089.5
ENST00000494526.1
CDS TCA 72 bp GGAAGACAGTCTATGGGACCAGTGTTGGAAAGAGACTaGGGCTCCTGTGAGGAGGATCTGGAAAAATCTGTC +
Preference number: 6 (lower is better)
Translates to: GRQSMGPVLERD*GSCEEDLEKSV
Trigger: GACAGATTTTTCCAGATCCTCCTCACAGGAGCCTCAGTCTCTTTCCAACACTGGTCCCATAGACTGTCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS GCA 72 bp AATTGCTTTTGGCCATGTCATTGGTGCACGGCTGCTTaGCTGCTAGGAAGAACTCAGGGATGCATCTTTGAC +
Preference number: 6 (lower is better)
Translates to: NCFWPCHWCTAA*LLGRTQGCIFD
Trigger: GTCAAAGATGCATCCCTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS GCA 72 bp ACAGAATTGCTTTTGGCCATGTCATTGGTGCACGGCTaGTTGCCTGCTAGGAAGAACTCAGGGATGCATCTT +
Preference number: 6 (lower is better)
Translates to: TELLLAMSLVHG*LPARKNSGMHL
Trigger: AAGATGCATCCCTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000462507.1
ENST00000469009.5
ENST00000470089.5
CDS CCA 72 bp CATCCAAAACATGCACAGTGTCAAACTCCAGGCCTTTaGCTTTGTGCACAGTGCCCAGAATGTACTCTGAGG +
Preference number: 6 (lower is better)
Translates to: HPKHAQCQTPGL*LCAQCPECTLR
Trigger: CCTCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397269.7
ENST00000461504.5
CDS CAA 72 bp TACTTTTCAACAACTGCGATCTTGGCTTCAAGCTCCTaGTCCTCGGCAGCGGTCACATACCTCTTGAAGCCA +
Preference number: 6 (lower is better)
Translates to: YFSTTAILASSS*SSAAVTYLLKP
Trigger: TGGCTTCAAGAGGTATGTGACCGCTGCCGAGGACAAGGAGCTTGAAGCCAAGATCGCAGTTGTTGAAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000485290.1
CDS CAA 72 bp AAAACATGCACAGTGTCAAACTCCAGGCCTTTGGCTTaGTGCACAGTGCCCAGAATGTACTCTGAGGTTGGG +
Preference number: 6 (lower is better)
Translates to: KTCTVSNSRPLA*CTVPRMYSEVG
Trigger: CCCAACCTCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397269.7
ENST00000461504.5
CDS CAA 90 bp TCGTCAGCCGAGGCAAAGAAGTTTTCTAGAGTCTTACACACAAGCTaGGCTCTTATGAATCCACCCTTCCCTTCAGCAAGGACGGAGTTG +
Preference number: 6 (lower is better)
Translates to: SSAEAKKFSRVLHTS*ALMNPPFPSARTEL
Trigger: CAACTCCGTCCTTGCTGAAGGGAAGGGTGGATTCATAAGAGCCAAGCTTGTGTGTAAGACTCTAGAAAACTTCTTTGCCTCGGCTGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS CAA 90 bp ACCAGCTCTGGAATCCTGATGTTATACTTTTCAACAACTGCGATCTaGGCTTCAAGCTCCTTGTCCTCGGCAGCGGTCACATACCTCTTG +
Preference number: 6 (lower is better)
Translates to: TSSGILMLYFSTTAI*ASSSLSSAAVTYLL
Trigger: CAAGAGGTATGTGACCGCTGCCGAGGACAAGGAGCTTGAAGCCAAGATCGCAGTTGTTGAAAAGTATAACATCAGGATTCCAGAGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000485290.1
CDS TCA 72 bp TCAATTGAACTGAATCACCAGTACACTTTCCTCCAGTaGAATAACATGCCGCCTTCTCCCGCAGCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: SIELNHQYTFLQ*NNMPPSPAASR
Trigger: TCTGGAGGCTGCGGGAGAAGGCGGCATGTTATTTCACTGGAGGAAAGTGTACTGGTGATTCAGTTCAATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494526.1
CDS GCA 72 bp CAGTTAGACAGGATGCCGTCCACTTTGCTGACAGCTTaGTCTTCATTCATCAGGTATCGATGGTACAGCTTC +
Preference number: 6 (lower is better)
Translates to: QLDRMPSTLLTA*SSFIRYRWYSF
Trigger: GAAGCTGTACCATCGATACCTGATGAATGAAGAGCAAGCTGTCAGCAAAGTGGACGGCATCCTGTCTAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000469009.5
ENST00000470089.5
ENST00000494526.1
CDS GCA 72 bp CAGCTCTGGAATCCTGATGTTATACTTTTCAACAACTaGGATCTTGGCTTCAAGCTCCTTGTCCTCGGCAGC +
Preference number: 6 (lower is better)
Translates to: QLWNPDVILFNN*DLGFKLLVLGS
Trigger: GCTGCCGAGGACAAGGAGCTTGAAGCCAAGATCGCAGTTGTTGAAAAGTATAACATCAGGATTCCAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000485290.1
CDS GCA 72 bp CGGGCACAAGGCACTTTCACAAAATCATCCAAAACATaGACAGTGTCAAACTCCAGGCCTTTGGCTTTGTGC +
Preference number: 6 (lower is better)
Translates to: RAQGTFTKSSKT*TVSNSRPLALC
Trigger: GCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATGATTTTGTGAAAGTGCCTTGTGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000485290.1
ENST00000496013.5
CDS GCA 72 bp TATCAACGTATAAATTGGCCCAGGCAGACAGAAGGATaGAGGGGAAGACAGTCTATGGGACCAGTGTTGGAA +
Preference number: 6 (lower is better)
Translates to: YQRINWPRQTEG*RGRQSMGPVLE
Trigger: TTCCAACACTGGTCCCATAGACTGTCTTCCCCTGCATCCTTCTGTCTGCCTGGGCCAATTTATACGTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS CCA 72 bp TGTAAGTTGGATGGTTTTCTTGCCTGGCCAGACAGATaGCTCCTCTTTAACTTTTGTGGCCTGAGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: CKLDGFLAWPDR*LLFNFCGLSAG
Trigger: TCCTGCACTCAGGCCACAAAAGTTAAAGAGGAGCCATCTGTCTGGCCAGGCAAGAAAACCATCCAACTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS CCA 72 bp CATCCAAAACATGCACAGTGTCAAACTCCAGGCCTTTaGCTTTGTGCACAGTGCCCAGAATGTACTCTGCAA +
Preference number: 6 (lower is better)
Translates to: HPKHAQCQTPGL*LCAQCPECTLQ
Trigger: TTGCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000485290.1
CDS CCA 72 bp GCCAGGTGGGTACTCACGTTTCCTCCGTTCTTCCTCTaGCTGAAGAAGGATCCAAATATCAATGATTCTGTC +
Preference number: 6 (lower is better)
Translates to: ARWVLTFPPFFL*LKKDPNINDSV
Trigger: GACAGAATCATTGATATTTGGATCCTTCTTCAGCCAGAGGAAGAACGGAGGAAACGTGAGTACCCACCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS CCA 72 bp TATAGAAATGCTCGACGCTATCACTTGGGGCCCACGTaGAAGTATCAACGTATAAATTGGCCCAGGCAGACA +
Preference number: 6 (lower is better)
Translates to: YRNARRYHLGPT*KYQRINWPRQT
Trigger: TGTCTGCCTGGGCCAATTTATACGTTGATACTTCCACGTGGGCCCCAAGTGATAGCGTCGAGCATTTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS CCA 72 bp CATCCAAAACATGCACAGTGTCAAACTCCAGGCCTTTaGCTTTGTGCACAGTGCCCAGAATGTACTCTAGGA +
Preference number: 6 (lower is better)
Translates to: HPKHAQCQTPGL*LCAQCPECTLG
Trigger: TCCTAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496013.5
CDS CAA 72 bp GGAATCCTGATGTTATACTTTTCAACAACTGCGATCTaGGCTTCAAGCTCCTTGTCCTCGGCAGCGGTCACA +
Preference number: 6 (lower is better)
Translates to: GILMLYFSTTAI*ASSSLSSAAVT
Trigger: TGTGACCGCTGCCGAGGACAAGGAGCTTGAAGCCAAGATCGCAGTTGTTGAAAAGTATAACATCAGGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000485290.1
CDS CAA 72 bp AAAACATGCACAGTGTCAAACTCCAGGCCTTTGGCTTaGTGCACAGTGCCCAGAATGTACTCTGCAAAGTCC +
Preference number: 6 (lower is better)
Translates to: KTCTVSNSRPLA*CTVPRMYSAKS
Trigger: GGACTTTGCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000485290.1
CDS CAA 72 bp TCATCCAAAACATGCACAGTGTCAAACTCCAGGCCTTaGGCTTTGTGCACAGTGCCCAGAATGTACTCTGCA +
Preference number: 6 (lower is better)
Translates to: SSKTCTVSNSRP*ALCTVPRMYSA
Trigger: TGCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000485290.1
CDS CAA 72 bp TCATCCAAAACATGCACAGTGTCAAACTCCAGGCCTTaGGCTTTGTGCACAGTGCCCAGAATGTACTCTGAG +
Preference number: 6 (lower is better)
Translates to: SSKTCTVSNSRP*ALCTVPRMYSE
Trigger: CTCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397269.7
ENST00000461504.5
CDS CAA 72 bp TCATCCAAAACATGCACAGTGTCAAACTCCAGGCCTTaGGCTTTGTGCACAGTGCCCAGAATGTACTCTAGG +
Preference number: 6 (lower is better)
Translates to: SSKTCTVSNSRP*ALCTVPRMYSR
Trigger: CCTAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496013.5
CDS CAA 90 bp TTCTATGCCACAGTTAGACAGGATGCCGTCCACTTTGCTGACAGCTaGCTCTTCATTCATCAGGTATCGATGGTACAGCTTCTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: FYATVRQDAVHFADS*LFIHQVSMVQLLPR
Trigger: CCTTGGAAGAAGCTGTACCATCGATACCTGATGAATGAAGAGCAAGCTGTCAGCAAAGTGGACGGCATCCTGTCTAACTGTGGCATAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000469009.5
ENST00000470089.5
ENST00000494526.1
CDS CAA 90 bp TCTGACTCCTTTTCTATGCCACAGTTAGACAGGATGCCGTCCACTTaGCTGACAGCTTGCTCTTCATTCATCAGGTATCGATGGTACAGC +
Preference number: 6 (lower is better)
Translates to: SDSFSMPQLDRMPST*LTACSSFIRYRWYS
Trigger: GCTGTACCATCGATACCTGATGAATGAAGAGCAAGCTGTCAGCAAAGTGGACGGCATCCTGTCTAACTGTGGCATAGAAAAGGAGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000469009.5
ENST00000470089.5
ENST00000494526.1
CDS CAA 90 bp CCCTTCCCTTCAGCAAGGACGGAGTTGACCATGAAGGGTGTTAACTaGAAGAGATTCAACTTCTTCTTTGACTGGTACTTCCGCCCTATG +
Preference number: 6 (lower is better)
Translates to: PFPSARTELTMKGVN*KRFNFFFDWYFRPM
Trigger: CATAGGGCGGAAGTACCAGTCAAAGAAGAAGTTGAATCTCTTCAAGTTAACACCCTTCATGGTCAACTCCGTCCTTGCTGAAGGGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS CAA 90 bp ATCTTGGCTTCAAGCTCCTTGTCCTCGGCAGCGGTCACATACCTCTaGAAGCCACTAAAGCCTTCTTTGTGCACCCATCTTCTGATAAAT +
Preference number: 6 (lower is better)
Translates to: ILASSSLSSAAVTYL*KPLKPSLCTHLLIN
Trigger: ATTTATCAGAAGATGGGTGCACAAAGAAGGCTTTAGTGGCTTCAAGAGGTATGTGACCGCTGCCGAGGACAAGGAGCTTGAAGCCAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000485290.1
CDS CAA 90 bp CTGATGTTATACTTTTCAACAACTGCGATCTTGGCTTCAAGCTCCTaGTCCTCGGCAGCGGTCACATACCTCTTGAAGCCACTAAAGCCT +
Preference number: 6 (lower is better)
Translates to: LMLYFSTTAILASSS*SSAAVTYLLKPLKP
Trigger: AGGCTTTAGTGGCTTCAAGAGGTATGTGACCGCTGCCGAGGACAAGGAGCTTGAAGCCAAGATCGCAGTTGTTGAAAAGTATAACATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000485290.1
CDS CAA 90 bp AAATCATCCAAAACATGCACAGTGTCAAACTCCAGGCCTTTGGCTTaGTGCACAGTGCCCAGAATGTACTCTGAGGTTGGGAGTTCGAGA +
Preference number: 6 (lower is better)
Translates to: KSSKTCTVSNSRPLA*CTVPRMYSEVGSSR
Trigger: TCTCGAACTCCCAACCTCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397269.7
ENST00000461504.5
CDS CAA 90 bp GACACCATTCAGTTTTTCACTCTGCTCAACCATGACTCTCTGTCCTaGGCTGTTCTTACACCAAATAGGCACGTGATCAATGGTCAGCTC +
Preference number: 6 (lower is better)
Translates to: DTIQFFTLLNHDSLS*AVLTPNRHVINGQL
Trigger: GAGCTGACCATTGATCACGTGCCTATTTGGTGTAAGAACAGCCAAGGACAGAGAGTCATGGTTGAGCAGAGTGAAAAACTGAATGGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS CAA 90 bp TTCACAAAATCATCCAAAACATGCACAGTGTCAAACTCCAGGCCTTaGGCTTTGTGCACAGTGCCCAGAATGTACTCTGAGGTTGGGAGT +
Preference number: 6 (lower is better)
Translates to: FTKSSKTCTVSNSRP*ALCTVPRMYSEVGS
Trigger: ACTCCCAACCTCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATGATTTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397269.7
ENST00000461504.5
CDS TCA 72 bp CTGACGCTTAAGCTGTTGCACTCGGTGAAGCCCAGGTaGAAAGCTGTTCTGGGAAAAATGCATCAGATTTCA +
Preference number: 6 (lower is better)
Translates to: LTLKLLHSVKPR*KAVLGKMHQIS
Trigger: TGAAATCTGATGCATTTTTCCCAGAACAGCTTTTCACCTGGGCTTCACCGAGTGCAACAGCTTAAGCGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470353.1
CDS GCA 72 bp CAGTGTCAAACTCCAGGCCTTTGGCTTTGTGCACAGTaGCCAGAATGTACTCTGCAAAGTCCAAATCTTCTA +
Preference number: 6 (lower is better)
Translates to: QCQTPGLWLCAQ*PECTLQSPNLL
Trigger: TAGAAGATTTGGACTTTGCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000485290.1
CDS CCA 72 bp TTGCTGACAGCTTGCTCTTCATTCATCAGGTATCGATaGTACAGCTTCTTCCAAGGAATGAACAGCGGGTCA +
Preference number: 6 (lower is better)
Translates to: LLTACSSFIRYR*YSFFQGMNSGS
Trigger: TGACCCGCTGTTCATTCCTTGGAAGAAGCTGTACCATCGATACCTGATGAATGAAGAGCAAGCTGTCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000469009.5
ENST00000470089.5
ENST00000494526.1
CDS CCA 72 bp CCGTCTCACTGTAATTCTGTAAGAAAGTCACTGACTTaGTTAGGCCTCCACTTCCCCACCTGTAAAACCCTA +
Preference number: 6 (lower is better)
Translates to: PSHCNSVRKSLT*LGLHFPTCKTL
Trigger: TAGGGTTTTACAGGTGGGGAAGTGGAGGCCTAACCAAGTCAGTGACTTTCTTACAGAATTACAGTGAGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462507.1
CDS CCA 72 bp TGTTGGAAAGAGACTGAGGCTCCTGTGAGGAGGATCTaGAAAAATCTGTCAGTACCTATGAAAACAGGAGGC +
Preference number: 6 (lower is better)
Translates to: CWKETEAPVRRI*KNLSVPMKTGG
Trigger: GCCTCCTGTTTTCATAGGTACTGACAGATTTTTCCAGATCCTCCTCACAGGAGCCTCAGTCTCTTTCCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS CAA 90 bp TTTCACCACCTGGAGAGGTTCCATCTTGTGATTCAGAATCAGCTGTaGTTCATGTGTAAGTTGGATGGTTTTCTTGCCTGGCCAGACAGA +
Preference number: 6 (lower is better)
Translates to: FHHLERFHLVIQNQL*FMCKLDGFLAWPDR
Trigger: TCTGTCTGGCCAGGCAAGAAAACCATCCAACTTACACATGAACAACAGCTGATTCTGAATCACAAGATGGAACCTCTCCAGGTGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS TCA 72 bp GGTGGGTACTCACGTTTCCTCCGTTCTTCCTCTGGCTaGAGAAGGATCCAAATATCAATGATTCTGTCCAAT +
Preference number: 6 (lower is better)
Translates to: GGYSRFLRSSSG*RRIQISMILSN
Trigger: ATTGGACAGAATCATTGATATTTGGATCCTTCTTCAGCCAGAGGAAGAACGGAGGAAACGTGAGTACCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS CAA 72 bp GAGGCAAAGAAGTTTTCTAGAGTCTTACACACAAGCTaGGCTCTTATGAATCCACCCTTCCCTTCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: EAKKFSRVLHTS*ALMNPPFPSAR
Trigger: CCTTGCTGAAGGGAAGGGTGGATTCATAAGAGCCAAGCTTGTGTGTAAGACTCTAGAAAACTTCTTTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS CAA 90 bp TCCTCGGCAGCGGTCACATACCTCTTGAAGCCACTAAAGCCTTCTTaGTGCACCCATCTTCTGATAAATTTGTCTTTAATGACGAGGTTT +
Preference number: 6 (lower is better)
Translates to: SSAAVTYLLKPLKPS*CTHLLINLSLMTRF
Trigger: AAACCTCGTCATTAAAGACAAATTTATCAGAAGATGGGTGCACAAAGAAGGCTTTAGTGGCTTCAAGAGGTATGTGACCGCTGCCGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000485290.1
CDS CAA 90 bp AAATCATCCAAAACATGCACAGTGTCAAACTCCAGGCCTTTGGCTTaGTGCACAGTGCCCAGAATGTACTCTGCAAAGTCCAAATCTTCT +
Preference number: 6 (lower is better)
Translates to: KSSKTCTVSNSRPLA*CTVPRMYSAKSKSS
Trigger: AGAAGATTTGGACTTTGCAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000485290.1
CDS CAA 90 bp AAATCATCCAAAACATGCACAGTGTCAAACTCCAGGCCTTTGGCTTaGTGCACAGTGCCCAGAATGTACTCTAGGATAAAAACACAGCAC +
Preference number: 6 (lower is better)
Translates to: KSSKTCTVSNSRPLA*CTVPRMYSRIKTQH
Trigger: GTGCTGTGTTTTTATCCTAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGATGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496013.5
CDS GCA 72 bp AGAGATCATGTGACTTGCAGAGTCCGAAATCTTTACTaGCTGGCCCTTTACAGAAAAAGTCTACAGACGATC +
Preference number: 6 (lower is better)
Translates to: RDHVTCRVRNLY*LALYRKSLQTI
Trigger: GATCGTCTGTAGACTTTTTCTGTAAAGGGCCAGGCAGTAAAGATTTCGGACTCTGCAAGTCACATGATCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470353.1
CDS CAA 72 bp AAAGAAAAGCGCTATAGAAATGCTCGACGCTATCACTaGGGGCCCACGTGGAAGTATCAACGTATAAATTGG +
Preference number: 6 (lower is better)
Translates to: KEKRYRNARRYH*GPTWKYQRINW
Trigger: CCAATTTATACGTTGATACTTCCACGTGGGCCCCAAGTGATAGCGTCGAGCATTTCTATAGCGCTTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475867.5
CDS CAA 72 bp AAAACATGCACAGTGTCAAACTCCAGGCCTTTGGCTTaGTGCACAGTGCCCAGAATGTACTCTAGGATAAAA +
Preference number: 6 (lower is better)
Translates to: KTCTVSNSRPLA*CTVPRMYSRIK
Trigger: TTTTATCCTAGAGTACATTCTGGGCACTGTGCACAAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496013.5
CDS CAA 72 bp TCAGCAAGGACGGAGTTGACCATGAAGGGTGTTAACTaGAAGAGATTCAACTTCTTCTTTGACTGGTACTTC +
Preference number: 6 (lower is better)
Translates to: SARTELTMKGVN*KRFNFFFDWYF
Trigger: GAAGTACCAGTCAAAGAAGAAGTTGAATCTCTTCAAGTTAACACCCTTCATGGTCAACTCCGTCCTTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
CDS CAA 72 bp GCGGTCACATACCTCTTGAAGCCACTAAAGCCTTCTTaGTGCACCCATCTTCTGATAAATTTGTCTTTAATG +
Preference number: 6 (lower is better)
Translates to: AVTYLLKPLKPS*CTHLLINLSLM
Trigger: CATTAAAGACAAATTTATCAGAAGATGGGTGCACAAAGAAGGCTTTAGTGGCTTCAAGAGGTATGTGACCGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000397269.7
ENST00000461504.5
ENST00000475867.5
ENST00000485290.1
CDS CAA 90 bp GTACTCTGCAAAGTCCAAATCTTCTATATGGCATTTTTCTATCCTTaGCACCAGCTCTGGAATCCTGATGTTATACTTTTCAACAACTGC +
Preference number: 6 (lower is better)
Translates to: VLCKVQIFYMAFFYP*HQLWNPDVILFNNC
Trigger: GCAGTTGTTGAAAAGTATAACATCAGGATTCCAGAGCTGGTGCAAAGGATAGAAAAATGCCATATAGAAGATTTGGACTTTGCAGAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362091.9
ENST00000379999.6
ENST00000485290.1
CDS CAA 90 bp CATCTCTGCAAAGTCCAAATCTTCTATATGGCATTTTTCTATCCTTaGCACCAGCTCTGGAATCCTGATGTTATACTTTTCAACAACTGC +
Preference number: 6 (lower is better)
Translates to: HLCKVQIFYMAFFYP*HQLWNPDVILFNNC
Trigger: GCAGTTGTTGAAAAGTATAACATCAGGATTCCAGAGCTGGTGCAAAGGATAGAAAAATGCCATATAGAAGATTTGGACTTTGCAGAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397269.7
ENST00000461504.5