RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAXDC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000170271

Ensembl transcript IDs: ENST00000326080.10, ENST00000423554.5, ENST00000517448.5, ENST00000517874.1, ENST00000517938.5, ENST00000518651.5, ENST00000519258.1, ENST00000519501.5, ENST00000520461.1, ENST00000520581.5, ENST00000521518.5, ENST00000522825.1, ENST00000523997.5, ENST00000524250.5, ENST00000524363.5

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGGAGCCAGGTCCACCAAGGCCAGAGACAGACAGGCGAGACTGTaGAAGGCCAGGGAGATGCTGCCTGGTAAGTGCTCAGCTGGCCTA +
Preference number: 1 (lower is better)
Translates to: EGARSTKARDRQARL*KAREMLPGKCSAGL
Trigger: TAGGCCAGCTGAGCACTTACCAGGCAGCATCTCCCTGGCCTTCCACAGTCTCGCCTGTCTGTCTCTGGCCTTGGTGGACCTGGCTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR GCA 90 bp AGACAGGCGAGACTGTGGAAGGCCAGGGAGATGCTGCCTGGTAAGTaGTCAGCTGGCCTACTGGGCAAGTCCTCTGGGGTTCTAGAGCTG +
Preference number: 1 (lower is better)
Translates to: RQARLWKAREMLPGK*SAGLLGKSSGVLEL
Trigger: CAGCTCTAGAACCCCAGAGGACTTGCCCAGTAGGCCAGCTGAGCACTTACCAGGCAGCATCTCCCTGGCCTTCCACAGTCTCGCCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR TCA 90 bp GAAGGAGCCGGTGTGAATAGTAGAACAAGACTTCCTCGATCAGCGTaGAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCT +
Preference number: 1 (lower is better)
Translates to: EGAGVNSRTRLPRSA*RWPAPGGTSGRWVA
Trigger: AGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTTCACGCTGATCGAGGAAGTCTTGTTCTACTATTCACACCGGCTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000522825.1
3UTR CCA 90 bp GTGATGATGAGGGCCAAGGAAAACCACATGGTGATGGAGGACAAGTaGGAGCCCATTACTAATGGGCCCACTATCACCGGTAGCATGTTG +
Preference number: 1 (lower is better)
Translates to: VMMRAKENHMVMEDK*EPITNGPTITGSML
Trigger: CAACATGCTACCGGTGATAGTGGGCCCATTAGTAATGGGCTCCCACTTGTCCTCCATCACCATGTGGTTTTCCTTGGCCCTCATCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520581.5
3UTR TCA 90 bp TTGTGTGTGTGTTGGGTGAAGTGGCGACTGGCATCTGGTATGTCATaGATTGAGACCTATAATGATTTGCCAGGGTGTCTTGGCTCTGGC +
Preference number: 1 (lower is better)
Translates to: LCVCWVKWRLASGMS*IETYNDLPGCLGSG
Trigger: GCCAGAGCCAAGACACCCTGGCAAATCATTATAGGTCTCAATTCATGACATACCAGATGCCAGTCGCCACTTCACCCAACACACACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR GCA 90 bp AGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGCCACAGGTTCATTCTTaGCGACCTGAATTCGGTAGC +
Preference number: 2 (lower is better)
Translates to: RWPAPGGTSGRWVAHGGRPQVHS*RPEFGS
Trigger: GCTACCGAATTCAGGTCGGCAAGAATGAACCTGTGG...CCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522825.1
3UTR CAA 90 bp ACCCTGGTGGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATaGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCTGAG +
Preference number: 2 (lower is better)
Translates to: TLVVPSLGRVAEGGK*LGAIRKPCLHPMAE
Trigger: CTCAGCCATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACCACCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
3UTR-3UTR TCA 90 bp ATGGAGGTGGTCCAGCACACCCAGCACCCCATAGCACTGGTTGAACTTGAGATGCTTCCTCGATCAGCGTaGAGATGGCCAGCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: MEVVQHTQHPIALVELEMLPRSA*RWPAPG
Trigger: TCCTGGAGCTGGCCATCTTCACGCTGATCGAGGAAG...CATCTCAAGTTCAACCAGTGCTATGGGGTGCTGGGTGTGCTGGACCACCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520581.5
3UTR CAA 90 bp CCATTGAGGGACATCAAGGGCAGTAGTTTGAAGAAAGCCTCATCCTaGGCCCTGCTTTTCCGGGAAGCCGACCTTCCCTCTACCCTGGTG +
Preference number: 2 (lower is better)
Translates to: PLRDIKGSSLKKASS*ALLFREADLPSTLV
Trigger: CACCAGGGTAGAGGGAAGGTCGGCTTCCCGGAAAAGCAGGGCCAAGGATGAGGCTTTCTTCAAACTACTGCCCTTGATGTCCCTCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR CCA 90 bp ACGGCGGCAGGGGTCTCTCCACCATTTGAGGAAGGGATAGAGGAAGACCACCATACTGTGCGGATAGACTaGCGCAGTTTCACAGGATCC +
Preference number: 2 (lower is better)
Translates to: TAAGVSPPFEEGIEEDHHTVRID*RSFTGS
Trigger: GGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGT...ATGGTGGTCTTCCTCTATCCCTTCCTCAAATGGTGGAGAGACCCCTGCCGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522825.1
3UTR-3UTR CCA 90 bp CCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCGTGTCTGCATCCCATaGCTGAGGGACAGCCAGGAT +
Preference number: 2 (lower is better)
Translates to: PSLGRVAEGGKLLGAIRKRVCIP*LRDSQD
Trigger: ATCCTGGCTGTCCCTCAGCCATGGGATGCAGACACG...CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
3UTR-3UTR CCA 90 bp GAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGGGAACCAGTGGAAGGTaGGTAGCTCACGGCGGCAGG +
Preference number: 2 (lower is better)
Translates to: EITPMGAVHSWCFLWIFLGTSGR*VAHGGR
Trigger: CCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCC...CAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
3UTR-3UTR TCA 90 bp GTGGTGATGATGAGGGCCAAGGAAAACCACATGGTGATGGAGGACAAGTGGGAGGGTCTCTCCACCATTTaGGGAAGGGATAGAGGAAGA +
Preference number: 2 (lower is better)
Translates to: VVMMRAKENHMVMEDKWEGLSTI*GRDRGR
Trigger: TCTTCCTCTATCCCTTCCTCAAATGGTGGAGAGACC...CTCCCACTTGTCCTCCATCACCATGTGGTTTTCCTTGGCCCTCATCATCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520581.5
3UTR-3UTR GCA 90 bp TTATTTGTAGGAAGAGGTGATGAGTGCAGGCCAGCAGCTGAGAACTTACAGCTTCCTCATCCTTGGCCCTaGTTTTCCGGGAAGCCGACC +
Preference number: 2 (lower is better)
Translates to: LFVGRGDECRPAAENLQLPHPWP*FSGKPT
Trigger: GGTCGGCTTCCCGGAAAAGCAGGGCCAAGGATGAGG...AAGCTGTAAGTTCTCAGCTGCTGGCCTGCACTCATCACCTCTTCCTACAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR TCA 90 bp AGAACTTACAGCTTTGATGCACCAGGAACTGTATTCAAGCTGAGGGCAAAAGCCGGAGTTATCTGGGGCTaGACCCCTCTCCTTCCACAG +
Preference number: 2 (lower is better)
Translates to: RTYSFDAPGTVFKLRAKAGVIWG*TPLLPQ
Trigger: CTGTGGAAGGAGAGGGGTTCAGCCCCAGATAACTCC...GGCTTTTGCCCTCAGCTTGAATACAGTTCCTGGTGCATCAAAGCTGTAAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR GCA 90 bp CCAACCTCAAGGATTTTGTTTGATACAGAAAAGGATAGGGCTGGGCCCTTCTGCAGCCTTGTCATTCTCTaGATCCTGCCCAGGCCACAA +
Preference number: 2 (lower is better)
Translates to: PTSRILFDTEKDRAGPFCSLVIL*ILPRPQ
Trigger: TTGTGGCCTGGGCAGGATGCAGAGAATGACAAGGCT...GCAGAAGGGCCCAGCCCTATCCTTTTCTGTATCAAACAAAATCCTTGAGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR CCA 90 bp CATGTTTTTCCGGGCTCTTTCTTCGGGGAGAAAGAGGGCTCTAACCTTTGGTCCTATGTGAAAGCCTTTTaGGGCAGGAAGGGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: HVFPGSFFGEKEGSNLWSYVKAF*GRKGQS
Trigger: ACTTTGCCCCTTCCTGCCCCAAAAGGCTTTCACATA...GGACCAAAGGTTAGAGCCCTCTTTCTCCCCGAAGAAAGAGCCCGGAAAAACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR TCA 90 bp GAGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTGGTCTCTCCACCATTTaGGGAAGGGATAGAGGAAGA +
Preference number: 2 (lower is better)
Translates to: ERDHANGSCPLMVFLVDFGLSTI*GRDRGR
Trigger: TCTTCCTCTATCCCTTCCTCAAATGGTGGAGAGACC...AAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
3UTR-3UTR TCA 90 bp AGAGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTGCCTGCTCACCGGTGTaGATAGTAGAACAAGACTTC +
Preference number: 2 (lower is better)
Translates to: RERSRQWELSTHGVSCGFACSPV*IVEQDF
Trigger: GAAGTCTTGTTCTACTATTCACACCGGTGAGCAGGC...AAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524363.5
3UTR-3UTR TCA 90 bp CACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTAGAATTCCTTGTTGATCAGTaGGCCCTAGACAGGATGAGG +
Preference number: 2 (lower is better)
Translates to: HANGSCPLMVFLVDFLVEFLVDQ*ALDRMR
Trigger: CCTCATCCTGTCTAGGGCTCACTGATCAACAAGGAA...TTCTACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524363.5
3UTR-3UTR TCA 90 bp AGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTCCTCAGTTTCCTTGTTaGTCAGTGAGCCCTAGACAG +
Preference number: 2 (lower is better)
Translates to: RSRQWELSTHGVSCGFSCPQFPC*SVSPRQ
Trigger: CTGTCTAGGGCTCACTGATCAACAAGGAAACTGAGG...ACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524363.5
3UTR-3UTR CCA 90 bp CCATTACTAATGGGCCCACTATCACCGGTAGCATGTTGGAGACTGCATGCTCTAAGAGGAAGACCACCATaGGGAAAGATATCATGCACT +
Preference number: 2 (lower is better)
Translates to: PLLMGPLSPVACWRLHALRGRPP*GKISCT
Trigger: AGTGCATGATATCTTTCCCCATGGTGGTCTTCCTCT...TAGAGCATGCAGTCTCCAACATGCTACCGGTGATAGTGGGCCCATTAGTAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520581.5
3UTR-3UTR TCA 90 bp GAGGCCAGGATGGGGACTTCAACCCAAGCAGCTGTGGTTTTGCCTTTGATAAGGGCATCTGGTATGTCATaGATTGAGACCTATAATGAT +
Preference number: 2 (lower is better)
Translates to: EARMGTSTQAAVVLPLIRASGMS*IETYND
Trigger: ATCATTATAGGTCTCAATTCATGACATACCAGATGC...CCTTATCAAAGGCAAAACCACAGCTGCTTGGGTTGAAGTCCCCATCCTGGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR TCA 90 bp CACATAAGGCTAAAGGTGTTAAAGTTTGGTCTGCACCTCGTTGGTTTTAATCCATGTGTGTGTGTTGGGTaGAGTGGCGACTGGCATCTG +
Preference number: 2 (lower is better)
Translates to: HIRLKVLKFGLHLVGFNPCVCVG*SGDWHL
Trigger: CAGATGCCAGTCGCCACTTCACCCAACACACACACA...TGGATTAAAACCAACGAGGTGCAGACCAAACTTTAACACCTTTAGCCTTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR GCA 90 bp CCAACCTCAAGGATTTTGTTTGATACAGAAAAGGATAGGGCTGGGCCCTTCTGCAGGCAAATTGTTAGGTaGAATCAGGAAGCCGTGTCT +
Preference number: 2 (lower is better)
Translates to: PTSRILFDTEKDRAGPFCRQIVR*NQEAVS
Trigger: AGACACGGCTTCCTGATTGCACCTAACAATTTGCCT...GCAGAAGGGCCCAGCCCTATCCTTTTCTGTATCAAACAAAATCCTTGAGGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR CCA 90 bp GAGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTAGAGGAAGACCACCATaGGGAAAGATATCATGCACT +
Preference number: 2 (lower is better)
Translates to: ERDHANGSCPLMVFLVDFRGRPP*GKISCT
Trigger: AGTGCATGATATCTTTCCCCATGGTGGTCTTCCTCT...AAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
3UTR CAA 90 bp GCTGATAGGAAGAAGGAGTCCATTTTGATAGTCCTGCCTGGAGACTaGGACCTAGCTGATACTAAGGTATTTTATAAAGCTACAGTGGAT +
Preference number: 2 (lower is better)
Translates to: ADRKKESILIVLPGD*DLADTKVFYKATVD
Trigger: ATCCACTGTAGCTTTATAAAATACCTTAGTATCAGCTAGGTCCAAGTCTCCAGGCAGGACTATCAAAATGGACTCCTTCTTCCTATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR CAA 90 bp AAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGATATCATGCACTGGTaGAAAAGAACTGTGCGGATA +
Preference number: 3 (lower is better)
Translates to: KMASSRRNQWKVGSSRRQDIMHW*KRTVRI
Trigger: TATCCGCACAGTTCTTTTCAACCAGTGCATGATATC...CTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000522825.1
3UTR TCA 72 bp CTTACAGCTTTGATGCACCAGGAACTGTATTCAAGCTaGGGGCAAAAGCCTCCTAGGGAGGGAGCCAGGTCC +
Preference number: 3 (lower is better)
Translates to: LTALMHQELYSS*GQKPPREGARS
Trigger: GGACCTGGCTCCCTCCCTAGGAGGCTTTTGCCCTCAGCTTGAATACAGTTCCTGGTGCATCAAAGCTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR CCA 72 bp AGGGCCAAGGAAAACCACATGGTGATGGAGGACAAGTaGGAGCCCATTACTAATGGGCCCACTATCACCGGT +
Preference number: 3 (lower is better)
Translates to: RAKENHMVMEDK*EPITNGPTITG
Trigger: ACCGGTGATAGTGGGCCCATTAGTAATGGGCTCCCACTTGTCCTCCATCACCATGTGGTTTTCCTTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520581.5
3UTR TCA 72 bp GGTGTGAATAGTAGAACAAGACTTCCTCGATCAGCGTaGAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: GVNSRTRLPRSA*RWPAPGGTSGR
Trigger: CCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTTCACGCTGATCGAGGAAGTCTTGTTCTACTATTCACACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000522825.1
ENST00000524363.5
3UTR TCA 72 bp GATGAGTGCAGGCCAGCAGCTGAGAACTTACAGCTTTaGTGCACCAGGAACTGTATTCAAGCTGAGGGCAAA +
Preference number: 3 (lower is better)
Translates to: DECRPAAENLQL*CTRNCIQAEGK
Trigger: TTTGCCCTCAGCTTGAATACAGTTCCTGGTGCATCAAAGCTGTAAGTTCTCAGCTGCTGGCCTGCACTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR CAA 90 bp CATGTTTTTCCGGGCTCTTTCTTCGGGGAGAAAGAGGGCTCTAACCTTTGGTCCATCAAGGGCAGTAGTTaGAAGAAAGCCTCATCCTTG +
Preference number: 3 (lower is better)
Translates to: HVFPGSFFGEKEGSNLWSIKGSS*KKASSL
Trigger: CAAGGATGAGGCTTTCTTCAAACTACTGCCCTTGAT...GGACCAAAGGTTAGAGCCCTCTTTCTCCCCGAAGAAAGAGCCCGGAAAAACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR CAA 90 bp TTAAAACGGGGCCTTTACCACTCACTCAGAGTGTTTGGTGTGTGTATGTTTGTGAAGAAAGCCTCATCCTaGGCCCTGCTTTTCCGGGAA +
Preference number: 3 (lower is better)
Translates to: LKRGLYHSLRVFGVCMFVKKASS*ALLFRE
Trigger: TTCCCGGAAAAGCAGGGCCAAGGATGAGGCTTTCTT...CACAAACATACACACACCAAACACTCTGAGTGAGTGGTAAAGGCCCCGTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR CAA 90 bp GGGAGAAAGAGGGCTCTAACCTTTGGTCCTCATTCAGATAGGCTAATTAGGGGTAGGGAAACCTTTTGTTaGCGGTGGGCCAGAGTTAAA +
Preference number: 3 (lower is better)
Translates to: GRKRALTFGPHSDRLIRGRETFC*RWARVK
Trigger: TTTAACTCTGGCCCACCGCAAACAAAAGGTTTCCCT...ACCCCTAATTAGCCTATCTGAATGAGGACCAAAGGTTAGAGCCCTCTTTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR CCA 72 bp ATCATGCACTGGTTGAAAAGAACTGTGCGGATAGACTaGCGCAGTTTCACAGGATCCACAGGTTCATTCTTG +
Preference number: 3 (lower is better)
Translates to: IMHWLKRTVRID*RSFTGSTGSFL
Trigger: CAAGAATGAACCTGTGGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGTTCTTTTCAACCAGTGCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522825.1
3UTR-3UTR CAA 90 bp GTTGGTTTTTGGTTTCCACATAAGGCTAAAGGTGTTAAAGTTTGGTCTGCACCTACAGAGGGAAACCTTTaGTTTGCGGTGGGCCAGAGT +
Preference number: 3 (lower is better)
Translates to: VGFWFPHKAKGVKVWSAPTEGNL*FAVGQS
Trigger: ACTCTGGCCCACCGCAAACAAAAGGTTTCCCTCTGT...AGGTGCAGACCAAACTTTAACACCTTTAGCCTTATGTGGAAACCAAAAACCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR-3UTR CAA 90 bp TACCAACCTCAAGGATTTTGTTTGATACAGAAAAGGATAGGGCTGGGCCCTTCTAAAGGATTTTGCTCTTaGCTCTGCCATGTTTTTCCG +
Preference number: 3 (lower is better)
Translates to: YQPQGFCLIQKRIGLGPSKGFCS*LCHVFP
Trigger: CGGAAAAACATGGCAGAGCAAAGAGCAAAATCCTTT...AGAAGGGCCCAGCCCTATCCTTTTCTGTATCAAACAAAATCCTTGAGGTTGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp CCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGGGTCTCTCCACCCTTCCTCGATCAGCGTaGAGATGGCCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGGTSGRWVAHGGRGLSTLPRSA*RWPAPG
Trigger: TCCTGGAGCTGGCCATCTTCACGCTGATCGAGGAAG...GGTGGAGAGACCCCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000522825.1
CDS-3UTR CCA 90 bp TCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGGGTCTCTCCACTTTCAGCCCCCGCTTTaGTGGCTGTTGCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SRRNQWKVGSSRRQGSLHFQPPL*WLLLLR
Trigger: CCGCAGCAGCAACAGCCACCAAAGCGGGGGCTGAAA...GTGGAGAGACCCCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
CDS-3UTR CCA 90 bp AGCGTGAAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGGGAACCAGTGGAAGGTaGGTAGCTCACGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVKMASSRRNQWKVGSSRGTSGR*VAHGGR
Trigger: CCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCC...CCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTTCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000522825.1
CDS-3UTR CCA 90 bp CGGGAAGCCGACCTTCCCTCTACCCTGGTGGTGCCATCATTAGGGCGTGTGGCCCGTGTCTGCATCCCATaGCTGAGGGACAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: READLPSTLVVPSLGRVARVCIP*LRDSQD
Trigger: ATCCTGGCTGTCCCTCAGCCATGGGATGCAGACACG...GGCCACACGCCCTAATGATGGCACCACCAGGGTAGAGGGAAGGTCGGCTTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp AGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGGGTCTCTCGAGGCACAGCGGGAGTaGTGTAGGATCAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: SSRRNQWKVGSSRRQGSLEAQRE*CRISIS
Trigger: TGAGATGCTGATCCTACAGCACTCCCGCTGTGCCTC...GAGAGACCCCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR CCA 90 bp CCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGGGTCTCTCCACCACTGTGCGGATAGACTaGCGCAGTTTCACAGGATCC +
Preference number: 4 (lower is better)
Translates to: PGGTSGRWVAHGGRGLSTTVRID*RSFTGS
Trigger: GGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGT...GGTGGAGAGACCCCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000522825.1
CDS-3UTR CCA 90 bp AGCGTGAAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGTCAGTCCCATGGAGGTaGTCCAGCACACCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SVKMASSRRNQWKVGSSRSVPWR*SSTPST
Trigger: GGTGCTGGGTGTGCTGGACCACCTCCATGGGACTGA...CCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTTCACGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS-3UTR CCA 90 bp TGGGGCAGGAAGGGGCAAAGTGATACCTGGCCGTCCCACCCTCTGGTCCCAGAACCTCTTTGGGGAGTCTaGGATGCTCTCAGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: WGRKGQSDTWPSHPLVPEPLWGV*DALRER
Trigger: CCGCTCTCTGAGAGCATCCCAGACTCCCCAAAGAGG...TTCTGGGACCAGAGGGTGGGACGGCCAGGTATCACTTTGCCCCTTCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp AAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGCTGTGTCCAAGCTGCTaGGGTCCTTGCACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: KMASSRRNQWKVGSSRRQLCPSC*GPCTGQ
Trigger: TTGACCTGTGCAAGGACCTCAGCAGCTTGGACACAG...CTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
CDS-3UTR GCA 90 bp AGCGTGAAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCCCCAGCAAGCCTCCTaGCTTTACACCCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: SVKMASSRRNQWKVGSSRPQQAS*LYTQLT
Trigger: AGTGAGCTGGGTGTAAAGGCAGGAGGCTTGCTGGGG...CCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTTCACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR CCA 90 bp AGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGGAGAGATCACGCCAATaGGAGCTGTCCACTCATGGT +
Preference number: 4 (lower is better)
Translates to: RWPAPGGTSGRWVAHGGRERSRQ*ELSTHG
Trigger: ACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTC...CCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
CDS-3UTR TCA 90 bp TCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGGGTCTCTCCACGGTCTCTCCACCATTTaGGGAAGGGATAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SRRNQWKVGSSRRQGSLHGLSTI*GRDRGR
Trigger: TCTTCCTCTATCCCTTCCTCAAATGGTGGAGAGACC...GTGGAGAGACCCCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000522825.1
CDS-3UTR GCA 90 bp CGGGAAGCCGACCTTCCCTCTACCCTGGTGGTGCCATCATTAGGGCGTGTGGCCCAAGGACTGATAACCTaGCTGCCAAAAGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: READLPSTLVVPSLGRVAQGLIT*LPKGRG
Trigger: CCCTCTTCCTTTTGGCAGGCAGGTTATCAGTCCTTG...GGCCACACGCCCTAATGATGGCACCACCAGGGTAGAGGGAAGGTCGGCTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp ACGGCGGCAGGGGTCTCTCCACCATTTGAGGAAGGGATAGAGGAAGACCACCATTTTCAGCCCCCGCTTTaGTGGCTGTTGCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TAAGVSPPFEEGIEEDHHFQPPL*WLLLLR
Trigger: CCGCAGCAGCAACAGCCACCAAAGCGGGGGCTGAAA...ATGGTGGTCTTCCTCTATCCCTTCCTCAAATGGTGGAGAGACCCCTGCCGCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
CDS-3UTR CCA 90 bp AAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGACTGTGCGGATAGACTaGCGCAGTTTCACAGGATCC +
Preference number: 4 (lower is better)
Translates to: KMASSRRNQWKVGSSRRQTVRID*RSFTGS
Trigger: GGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGT...CTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000522825.1
CDS-3UTR CCA 90 bp AGGCCACAAAGGAGTTATCTGGGGCTGAACCCCTCTCCTTCCACAGCAGAGGACGAACCACAGGGTTCCTaGCCATGTCTGGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RPQRSYLGLNPSPSTAEDEPQGS*PCLAAE
Trigger: CTCAGCCGCCAGACATGGCCAGGAACCCTGTGGTTC...GTCCTCTGCTGTGGAAGGAGAGGGGTTCAGCCCCAGATAACTCCTTTGTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp ACGGCGGCAGGGGTCTCTCCACCATTTGAGGAAGGGATAGAGGAAGACCACCATCTTCCTCGATCAGCGTaGAGATGGCCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TAAGVSPPFEEGIEEDHHLPRSA*RWPAPG
Trigger: TCCTGGAGCTGGCCATCTTCACGCTGATCGAGGAAG...ATGGTGGTCTTCCTCTATCCCTTCCTCAAATGGTGGAGAGACCCCTGCCGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000522825.1
CDS-3UTR TCA 90 bp AGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGGTGAAGGAGCCGGTGTaGATAGTAGAACAAGACTTC +
Preference number: 4 (lower is better)
Translates to: RWPAPGGTSGRWVAHGGRVKEPV*IVEQDF
Trigger: GAAGTCTTGTTCTACTATTCACACCGGCTCCTTCAC...CCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000522825.1
CDS-3UTR TCA 90 bp AGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGGGTCTCTCCACCATTTGAGGCCTTGGTCTGCTTaGACATGGTGTCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: RNQWKVGSSRRQGSLHHLRPWSA*TWCQSH
Trigger: ATGGGACTGACACCATGTTCAAGCAGACCAAGGCCT...CAAATGGTGGAGAGACCCCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS-3UTR TCA 90 bp GCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCTCAGAGAGCGGGGTaGAGCCCAGCAGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: ACGRRRQIVRCNQEAVSASQRAG*SPAGGH
Trigger: ATGTCCTCCTGCTGGGCTTCACCCCGCTCTCTGAGA...TGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp GGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGAACCAGTGGAAGGTaGGTAGCTCACGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRRRQIVRCNQEAVSASHGTSGR*VAHGGR
Trigger: CCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCC...ATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp CTTGAGATGGTGGTAGTCGTGGAATTCAGGCGAAGGCAGGAAGGGAAGGTGGTAGGAACCAGTGGAAGGTaGGTAGCTCACGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LEMVVVVEFRRRQEGKVVGTSGR*VAHGGR
Trigger: CCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCC...TACCACCTTCCCTTCCTGCCTTCGCCTGAATTCCACGACTACCACCATCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS-3UTR CCA 90 bp AGCGTGAAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGGAGAGATCACGCCAATaGGAGCTGTCCACTCATGGT +
Preference number: 4 (lower is better)
Translates to: SVKMASSRRNQWKVGSSRERSRQ*ELSTHG
Trigger: ACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTC...CCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTTCACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
CDS-3UTR CCA 90 bp GCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCAGCTCAGCTGGCCTACTaGGCAAGTCCTCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: ACGRRRQIVRCNQEAVSAAQLAY*ASPLGF
Trigger: GAACCCCAGAGGACTTGCCCAGTAGGCCAGCTGAGC...TGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp AGCGTGAAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGGGTCTCTCCACCATTTaGGGAAGGGATAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SVKMASSRRNQWKVGSSRGLSTI*GRDRGR
Trigger: TCTTCCTCTATCCCTTCCTCAAATGGTGGAGAGACC...CCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTTCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000522825.1
CDS-3UTR TCA 90 bp CGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCTCTCAGAGAGCGGGGTaGAGCCCAGCAGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: RRRQIVRCNQEAVSASHGSQRAG*SPAGGH
Trigger: ATGTCCTCCTGCTGGGCTTCACCCCGCTCTCTGAGA...GCCATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp AGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGGAGTTATCTGGGGCTaGACCCCTCTCCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: RACGRRRQIVRCNQEAVSGVIWG*TPLLPQ
Trigger: CTGTGGAAGGAGAGGGGTTCAGCCCCAGATAACTCC...AGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp GTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCTGAGGGACAGCCAGGATGACGTGCAGGCCAGCAGCTaGGAACTTACAGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: VQSGSRVCIPWLRDSQDDVQASS*ELTALM
Trigger: CATCAAAGCTGTAAGTTCTCAGCTGCTGGCCTGCAC...GTCATCCTGGCTGTCCCTCAGCCATGGGATGCAGACACGGCTTCCTGATTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp AGCGTGAAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGATGGCACCATGTCACTaGGTTCCAGAAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: SVKMASSRRNQWKVGSSRMAPCH*VPEGHK
Trigger: TTTGTGGCCTTCTGGAACTCAGTGACATGGTGCCAT...CCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTTCACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR CCA 90 bp GGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATTTTCAGCCCCCGCTTTaGTGGCTGTTGCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GRRRQIVRCNQEAVSASHFQPPL*WLLLLR
Trigger: CCGCAGCAGCAACAGCCACCAAAGCGGGGGCTGAAA...ATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp CCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGGGAACCAGTGGAAGGTaGGTAGCTCACGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSLGRVAEGGKLLGAIRKGTSGR*VAHGGR
Trigger: CCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCC...CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp GGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGTCAGTCCCATGGAGGTaGTCCAGCACACCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GAIIRACGRRRQIVRCNQSVPWR*SSTPST
Trigger: GGTGCTGGGTGTGCTGGACCACCTCCATGGGACTGA...CTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp TTTCCGGGAAGCCGACCTTCCCTCTACCCTGGTGGTGCCATCATTAGGGCGTGTTCACTCCATCCTCTTTaGGGAGTCTGGGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: FPGSRPSLYPGGAIIRACSLHPL*GVWDAL
Trigger: GAGAGCATCCCAGACTCCCCAAAGAGGATGGAGTGA...ACACGCCCTAATGATGGCACCACCAGGGTAGAGGGAAGGTCGGCTTCCCGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp TCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGGGGCAAAGTGATACCTaGCCGTCCCACCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SLGRVAEGGKLLGAIRKPGQSDT*PSHPLV
Trigger: GACCAGAGGGTGGGACGGCCAGGTATCACTTTGCCC...CGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp CGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCGTCCCTCCTCTGCAGTaGGCTGTGTCCAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RRRQIVRCNQEAVSASHGVPPLQ*AVSKLL
Trigger: CAGCAGCTTGGACACAGCCCACTGCAGAGGAGGGAC...GCCATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517938.5
CDS-3UTR TCA 90 bp CTGGTGGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCACTGTGTCCAAGCTGCTaGGGTCCTTGCACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LVVPSLGRVAEGGKLLGALCPSC*GPCTGQ
Trigger: TTGACCTGTGCAAGGACCTCAGCAGCTTGGACACAG...TGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp TTTGAAGAAAGCCTCATCCTTGGCCCTGCTTTTCCGGGAAGCCGACCTTCCCTCCCAGAAGGCCACAAATaGGAGAAGTCCAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: FEESLILGPAFPGSRPSLPEGHK*EKSRAQ
Trigger: CTGGGCTCTGGACTTCTCTCATTTGTGGCCTTCTGG...GAGGGAAGGTCGGCTTCCCGGAAAAGCAGGGCCAAGGATGAGGCTTTCTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp AGCGTGAAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGGTGAAGGAGCCGGTGTaGATAGTAGAACAAGACTTC +
Preference number: 4 (lower is better)
Translates to: SVKMASSRRNQWKVGSSRVKEPV*IVEQDF
Trigger: GAAGTCTTGTTCTACTATTCACACCGGCTCCTTCAC...CCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTTCACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000522825.1
CDS-3UTR TCA 90 bp GGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGTCTTGGCTCTGGCCTaGGTCGGGTATGTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GAIIRACGRRRQIVRCNQVLALA*VGYVKA
Trigger: GGCTTTCACATACCCGACTCAGGCCAGAGCCAAGAC...CTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp CGGGAAGCCGACCTTCCCTCTACCCTGGTGGTGCCATCATTAGGGCGTGTGGCCGAGAACTTACAGCTTTaGTGCACCAGGAACTGTATT +
Preference number: 4 (lower is better)
Translates to: READLPSTLVVPSLGRVAENLQL*CTRNCI
Trigger: AATACAGTTCCTGGTGCATCAAAGCTGTAAGTTCTC...GGCCACACGCCCTAATGATGGCACCACCAGGGTAGAGGGAAGGTCGGCTTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp ATCCACAGGTTCATTCTTGCCGACCTGAATTCGGTAGCGAGAGATGAAGTTAGGCACCCAGCTCACTGCTaGGGCACAGCGGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: IHRFILADLNSVARDEVRHPAHC*GTAGVL
Trigger: CAGCACTCCCGCTGTGCCTCAGCAGTGAGCTGGGTG...CCTAACTTCATCTCTCGCTACCGAATTCAGGTCGGCAAGAATGAACCTGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR GCA 90 bp GTGGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCTCAGGAAGCCGTGTCTaGATCCCATGGCTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: VVPSLGRVAEGGKLLGAISGSRV*IPWLRD
Trigger: GTCCCTCAGCCATGGGATGCAGACACGGCTTCCTGA...GATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR GCA 90 bp GAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCTCCTCATCCTTGGCCCTaGTTTTCCGGGAAGCCGACC +
Preference number: 4 (lower is better)
Translates to: EGGKLLGAIRKPCLHPMAPHPWP*FSGKPT
Trigger: GGTCGGCTTCCCGGAAAAGCAGGGCCAAGGATGAGG...AGCCATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp TTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTAGGGCTGGGCCCTTCTaGCAAGGACTGATAACCTGC +
Preference number: 4 (lower is better)
Translates to: LGRVAEGGKLLGAIRKPCRAGPF*QGLITC
Trigger: GCAGGTTATCAGTCCTTGGCAGAAGGGCCCAGCCCT...ACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp ATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGGATGTGTCCCTCCTCTaGAGTGGGCTGTGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: IRACGRRRQIVRCNQEAVDVSLL*SGLCPS
Trigger: GCTTGGACACAGCCCACTGCAGAGGAGGGACACATC...CACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517938.5
CDS-3UTR CCA 90 bp GGTGGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATTCCAGGAGGAACCAGTaGAAGGTGGGTAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: GGAIIRACGRRRQIVRCNSRRNQ*KVGSSR
Trigger: CCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGA...ATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp CCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGTCAGTCCCATGGAGGTaGTCCAGCACACCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PSLGRVAEGGKLLGAIRKSVPWR*SSTPST
Trigger: GGTGCTGGGTGTGCTGGACCACCTCCATGGGACTGA...CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp GGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGCGTGTCTGCATCCCATaGCTGAGGGACAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GAIIRACGRRRQIVRCNQRVCIP*LRDSQD
Trigger: ATCCTGGCTGTCCCTCAGCCATGGGATGCAGACACG...CTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp GGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGAGAGGAGGCCAGGATaGGGACTTCAACCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: GRRRQIVRCNQEAVSASHERRPG*GLQPKQ
Trigger: CTGCTTGGGTTGAAGTCCCCATCCTGGCCTCCTCTC...ATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR CAA 72 bp GTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATaGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: VPSLGRVAEGGK*LGAIRKPCLHP
Trigger: GGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp CCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCTTCCTCGATCAGCGTaGAGATGGCCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSLGRVAEGGKLLGAIRKLPRSA*RWPAPG
Trigger: TCCTGGAGCTGGCCATCTTCACGCTGATCGAGGAAG...CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp GTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCTGAGGGACAGCCAGGATGACGTGAAGGAGCCGGTGTaGATAGTAGAACAAGACTTC +
Preference number: 4 (lower is better)
Translates to: VQSGSRVCIPWLRDSQDDVKEPV*IVEQDF
Trigger: GAAGTCTTGTTCTACTATTCACACCGGCTCCTTCAC...GTCATCCTGGCTGTCCCTCAGCCATGGGATGCAGACACGGCTTCCTGATTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp TTTGAAGAAAGCCTCATCCTTGGCCCTGCTTTTCCGGGAAGCCGACCTTCCCTCAGGCCTTGGTCTGCTTaGACATGGTGTCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: FEESLILGPAFPGSRPSLRPWSA*TWCQSH
Trigger: ATGGGACTGACACCATGTTCAAGCAGACCAAGGCCT...GAGGGAAGGTCGGCTTCCCGGAAAAGCAGGGCCAAGGATGAGGCTTTCTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp TCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGGAGGGACAGCCAGGATaGCACTTAGGCTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SLGRVAEGGKLLGAIRKPEGQPG*HLGCLS
Trigger: TGAGAGACAGCCTAAGTGTCATCCTGGCTGTCCCTC...CGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp GGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGTGTGTGTGTGTTGGGTaGAGTGGCGACTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GAIIRACGRRRQIVRCNQCVCVG*SGDWHL
Trigger: CAGATGCCAGTCGCCACTTCACCCAACACACACACA...CTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp GAGGTGGTCCAGCACACCCAGCACCCCATAGCACTGGTTGAACTTGAGATGGTGTTCTCCTTTCATCTCTaGAGTGGGCTGTGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: EVVQHTQHPIALVELEMVFSFHL*SGLCPS
Trigger: GCTTGGACACAGCCCACTGCAGAGATGAAAGGAGAA...CACCATCTCAAGTTCAACCAGTGCTATGGGGTGCTGGGTGTGCTGGACCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS-3UTR GCA 90 bp CCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGTCAGGAAGCCGTGTCTaGATCCCATGGCTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: PSLGRVAEGGKLLGAIRKSGSRV*IPWLRD
Trigger: GTCCCTCAGCCATGGGATGCAGACACGGCTTCCTGA...CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR GCA 90 bp GCGGATAGACTGGCGCAGTTTCACAGGATCCACAGGTTCATTCTTGCCGACCTGCCAGGAAGGCACATCTaGGTTTTCCAGCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: ADRLAQFHRIHRFILADLPGRHI*VFQLAF
Trigger: AAAGGCCAGCTGGAAAACGCAGATGTGCCTTCCTGG...CAGGTCGGCAAGAATGAACCTGTGGATCCTGTGAAACTGCGCCAGTCTATCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR CCA 90 bp GAGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTGGAACCAGTGGAAGGTaGGTAGCTCACGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: ERDHANGSCPLMVFLVDFGTSGR*VAHGGR
Trigger: CCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCC...AAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR CCA 90 bp CCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGTCCAGGAGGAACCAGTaGAAGGTGGGTAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: PSLGRVAEGGKLLGAIRKSRRNQ*KVGSSR
Trigger: CCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGA...CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp CCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCTCTTTGGGGAGTCTaGGATGCTCTCAGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: PSLGRVAEGGKLLGAIRKPLWGV*DALRER
Trigger: CCGCTCTCTGAGAGCATCCCAGACTCCCCAAAGAGG...CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp AGAACTTACAGCTTTGATGCACCAGGAACTGTATTCAAGCTGAGGGCAAAAGCCGGCCGTCCCACCCTCTaGTCCCAGAAGGAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: RTYSFDAPGTVFKLRAKAGRPTL*SQKELS
Trigger: CGAGAGCTCCTTCTGGGACCAGAGGGTGGGACGGCC...GGCTTTTGCCCTCAGCTTGAATACAGTTCCTGGTGCATCAAAGCTGTAAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp GAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCTAGACAGGCGAGACTGTaGAAGGCCAGGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: EGGKLLGAIRKPCLHPMARQARL*KAREML
Trigger: CAGCATCTCCCTGGCCTTCCACAGTCTCGCCTGTCT...AGCCATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp CCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCTGTGTCCAAGCTGCTaGGGTCCTTGCACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: PSLGRVAEGGKLLGAIRKLCPSC*GPCTGQ
Trigger: TTGACCTGTGCAAGGACCTCAGCAGCTTGGACACAG...CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp CTTGTAGAATGTTGGGTGGTGAAGGAGCCTGGCCTCAGTTTCCTTGTTGATCAGCTTCCTCGATCAGCGTaGAGATGGCCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVECWVVKEPGLSFLVDQLPRSA*RWPAPG
Trigger: TCCTGGAGCTGGCCATCTTCACGCTGATCGAGGAAG...CTGATCAACAAGGAAACTGAGGCCAGGCTCCTTCACCACCCAACATTCTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524363.5
CDS-3UTR TCA 90 bp GTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAGGCCTTGGTCTGCTTaGACATGGTGTCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: VPSLGRVAEGGKLLGAIRRPWSA*TWCQSH
Trigger: ATGGGACTGACACCATGTTCAAGCAGACCAAGGCCT...CCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp ATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGAGGGACAGCCAGGATaGCACTTAGGCTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: IIRACGRRRQIVRCNQEAEGQPG*HLGCLS
Trigger: TGAGAGACAGCCTAAGTGTCATCCTGGCTGTCCCTC...GGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp GCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCAGAACTGTATTCAAGCTaGGGGCAAAAGCCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: ACGRRRQIVRCNQEAVSAELYSS*GQKPPR
Trigger: CCTAGGAGGCTTTTGCCCTCAGCTTGAATACAGTTC...TGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp TTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCTGAGGGACAGCCACCACAGGTTCATTCTTaGCGACCTGAATTCGGTAGC +
Preference number: 4 (lower is better)
Translates to: LLGAIRKPCLHPMAEGQPPQVHS*RPEFGS
Trigger: GCTACCGAATTCAGGTCGGCAAGAATGAACCTGTGG...TGGCTGTCCCTCAGCCATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR GCA 90 bp ATGGAGGTGGTCCAGCACACCCAGCACCCCATAGCACTGGTTGAACTTGAGATGCCACAGGTTCATTCTTaGCGACCTGAATTCGGTAGC +
Preference number: 4 (lower is better)
Translates to: MEVVQHTQHPIALVELEMPQVHS*RPEFGS
Trigger: GCTACCGAATTCAGGTCGGCAAGAATGAACCTGTGG...CATCTCAAGTTCAACCAGTGCTATGGGGTGCTGGGTGTGCTGGACCACCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS-3UTR GCA 90 bp AGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGGGTCTCTCCACCATTTGCACTTGGATGGCACCTaGTTTGACTTTTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: RNQWKVGSSRRQGSLHHLHLDGT*FDFSLC
Trigger: ACACAATGAAAAGTCAAAGCAGGTGCCATCCAAGTG...CAAATGGTGGAGAGACCCCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS-3UTR CCA 90 bp GGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGACTGTGCGGATAGACTaGCGCAGTTTCACAGGATCC +
Preference number: 4 (lower is better)
Translates to: GAIIRACGRRRQIVRCNQTVRID*RSFTGS
Trigger: GGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGT...CTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp AGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTGGAACCAGTGGAAGGTaGGTAGCTCACGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: RSRQWELSTHGVSCGFSCGTSGR*VAHGGR
Trigger: CCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCC...ACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR CCA 90 bp CCATTACTAATGGGCCCACTATCACCGGTAGCATGTTGGAGACTGCATGCTCTATCCAGGAGGAACCAGTaGAAGGTGGGTAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: PLLMGPLSPVACWRLHALSRRNQ*KVGSSR
Trigger: CCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGA...TAGAGCATGCAGTCTCCAACATGCTACCGGTGATAGTGGGCCCATTAGTAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS-3UTR CCA 90 bp CGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCGAGAGATCACGCCAATaGGAGCTGTCCACTCATGGT +
Preference number: 4 (lower is better)
Translates to: RRRQIVRCNQEAVSASHGERSRQ*ELSTHG
Trigger: ACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTC...GCCATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp GTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGGAGAGATCACGCCAATaGGAGCTGTCCACTCATGGT +
Preference number: 4 (lower is better)
Translates to: VPSLGRVAEGGKLLGAIRERSRQ*ELSTHG
Trigger: ACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTC...CCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp CGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCAGAAAGCCTCATCCTTaGCCCTGCTTTTCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RRRQIVRCNQEAVSASHGRKPHP*PCFSGK
Trigger: CTTCCCGGAAAAGCAGGGCCAAGGATGAGGCTTTCT...GCCATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp TCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGGTGTGTTGGGTGAAGTaGCGACTGGCATCTGGTATG +
Preference number: 4 (lower is better)
Translates to: SLGRVAEGGKLLGAIRKPVCWVK*RLASGM
Trigger: CATACCAGATGCCAGTCGCCACTTCACCCAACACAC...CGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp TCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGACTGGGCAAGTCCTCTaGGGTTCTAGAGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: SLGRVAEGGKLLGAIRKPTGQVL*GSRADR
Trigger: CCTATCAGCTCTAGAACCCCAGAGGACTTGCCCAGT...CGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR CAA 72 bp CTCCTGATCCCATTGAGGGACATCAAGGGCAGTAGTTaGAAGAAAGCCTCATCCTTGGCCCTGCTTTTCCGG +
Preference number: 4 (lower is better)
Translates to: LLIPLRDIKGSS*KKASSLALLFR
Trigger: CCGGAAAAGCAGGGCCAAGGATGAGGCTTTCTTCAAACTACTGCCCTTGATGTCCCTCAATGGGATCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp CTGGTGGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCACCAATAGAAGCCCATTaGAGCTCCAGAAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LVVPSLGRVAEGGKLLGAPIEAH*SSRRRD
Trigger: GTCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGG...TGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp GAGGCCAGGATGGGGACTTCAACCCAAGCAGCTGTGGTTTTGCCTTTGATAAGGGGTCTCTCCACCATTTaGGGAAGGGATAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: EARMGTSTQAAVVLPLIRGLSTI*GRDRGR
Trigger: TCTTCCTCTATCCCTTCCTCAAATGGTGGAGAGACC...CCTTATCAAAGGCAAAACCACAGCTGCTTGGGTTGAAGTCCCCATCCTGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp GTGGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCGGTCTCTCCACCATTTaGGGAAGGGATAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VVPSLGRVAEGGKLLGAIGLSTI*GRDRGR
Trigger: TCTTCCTCTATCCCTTCCTCAAATGGTGGAGAGACC...GATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp AGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCCTTCCTCGATCAGCGTaGAGATGGCCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: REITPMGAVHSWCFLWIFLPRSA*RWPAPG
Trigger: TCCTGGAGCTGGCCATCTTCACGCTGATCGAGGAAG...GAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR GCA 90 bp GGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGCCACAGGTTCATTCTTaGCGACCTGAATTCGGTAGC +
Preference number: 4 (lower is better)
Translates to: GAIIRACGRRRQIVRCNQPQVHS*RPEFGS
Trigger: GCTACCGAATTCAGGTCGGCAAGAATGAACCTGTGG...CTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp GAGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTTCCAGGAGGAACCAGTaGAAGGTGGGTAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: ERDHANGSCPLMVFLVDFSRRNQ*KVGSSR
Trigger: CCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGA...AAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR CCA 90 bp GGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGTGATGGAGGACAAGTaGGAGCCCATTACTAATGGG +
Preference number: 4 (lower is better)
Translates to: GRRRQIVRCNQEAVSASHVMEDK*EPITNG
Trigger: CCCATTAGTAATGGGCTCCCACTTGTCCTCCATCAC...ATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp CCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGTCACTCCATCCTCTTTaGGGAGTCTGGGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: PSLGRVAEGGKLLGAIRKSLHPL*GVWDAL
Trigger: GAGAGCATCCCAGACTCCCCAAAGAGGATGGAGTGA...CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp AGAACTTACAGCTTTGATGCACCAGGAACTGTATTCAAGCTGAGGGCAAAAGCCAGAAGGAGCTCTCGCTaGAGCCAGGCAGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RTYSFDAPGTVFKLRAKARRSSR*SQAASS
Trigger: ACTGGAGGCTGCCTGGCTCCAGCGAGAGCTCCTTCT...GGCTTTTGCCCTCAGCTTGAATACAGTTCCTGGTGCATCAAAGCTGTAAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp TTTCCGGGAAGCCGACCTTCCCTCTACCCTGGTGGTGCCATCATTAGGGCGTGTTCTTTAAATTGTTCTTaGGAACCACAGGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FPGSRPSLYPGGAIIRACSLNCS*EPQGSW
Trigger: CCAGGAACCCTGTGGTTCCCAAGAACAATTTAAAGA...ACACGCCCTAATGATGGCACCACCAGGGTAGAGGGAAGGTCGGCTTCCCGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp TGTGCGGATAGACTGGCGCAGTTTCACAGGATCCACAGGTTCATTCTTGCCGACGACAAGGCACTTGGATaGCACCATGTCACTGAGTTC +
Preference number: 4 (lower is better)
Translates to: CADRLAQFHRIHRFILADDKALG*HHVTEF
Trigger: GAACTCAGTGACATGGTGCCATCCAAGTGCCTTGTC...GTCGGCAAGAATGAACCTGTGGATCCTGTGAAACTGCGCCAGTCTATCCGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR TCA 90 bp AGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCCTGTGTCCAAGCTGCTaGGGTCCTTGCACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: REITPMGAVHSWCFLWIFLCPSC*GPCTGQ
Trigger: TTGACCTGTGCAAGGACCTCAGCAGCTTGGACACAG...GAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
CDS-3UTR TCA 90 bp TTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTAAGATGCCATGTCACTaGGTTCCAGAAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: LGRVAEGGKLLGAIRKPCKMPCH*VPEGHK
Trigger: TTTGTGGCCTTCTGGAACTCAGTGACATGGCATCTT...ACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp GTGGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAAGATGCCATGTCACTaGGTTCCAGAAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: VVPSLGRVAEGGKLLGAIKMPCH*VPEGHK
Trigger: TTTGTGGCCTTCTGGAACTCAGTGACATGGCATCTT...GATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp CTGGTTGAAAAGAACTGTGCGGATAGACTGGCGCAGTTTCACAGGATCCACAGGGGTCTCTCCACCATTTaGGGAAGGGATAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LVEKNCADRLAQFHRIHRGLSTI*GRDRGR
Trigger: TCTTCCTCTATCCCTTCCTCAAATGGTGGAGAGACC...CCTGTGGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGTTCTTTTCAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR TCA 90 bp AGAACTTACAGCTTTGATGCACCAGGAACTGTATTCAAGCTGAGGGCAAAAGCCCTTCCTCGATCAGCGTaGAGATGGCCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RTYSFDAPGTVFKLRAKALPRSA*RWPAPG
Trigger: TCCTGGAGCTGGCCATCTTCACGCTGATCGAGGAAG...GGCTTTTGCCCTCAGCTTGAATACAGTTCCTGGTGCATCAAAGCTGTAAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp GAGGCCAGGATGGGGACTTCAACCCAAGCAGCTGTGGTTTTGCCTTTGATAAGGGTGAAGGAGCCGGTGTaGATAGTAGAACAAGACTTC +
Preference number: 4 (lower is better)
Translates to: EARMGTSTQAAVVLPLIRVKEPV*IVEQDF
Trigger: GAAGTCTTGTTCTACTATTCACACCGGCTCCTTCAC...CCTTATCAAAGGCAAAACCACAGCTGCTTGGGTTGAAGTCCCCATCCTGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp CTGGTTGAAAAGAACTGTGCGGATAGACTGGCGCAGTTTCACAGGATCCACAGGCCACAGGTTCATTCTTaGCGACCTGAATTCGGTAGC +
Preference number: 4 (lower is better)
Translates to: LVEKNCADRLAQFHRIHRPQVHS*RPEFGS
Trigger: GCTACCGAATTCAGGTCGGCAAGAATGAACCTGTGG...CCTGTGGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGTTCTTTTCAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR CCA 90 bp TCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTAGATCCAGGAGGAACCAGTaGAAGGTGGGTAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: SRQWELSTHGVSCGFSCRSRRNQ*KVGSSR
Trigger: CCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGA...TCTACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR CCA 90 bp GTGGGCATAGAGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGATGGAGGACAAGTaGGAGCCCATTACTAATGGG +
Preference number: 4 (lower is better)
Translates to: VGIERDHANGSCPLMVFLVMEDK*EPITNG
Trigger: CCCATTAGTAATGGGCTCCCACTTGTCCTCCATCAC...AAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCTCTATGCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS-3UTR CCA 90 bp TATAGGGTGGGCATAGAGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGAAGAGACAAGGCACTTaGATGGCACCTGCTTTGACT +
Preference number: 4 (lower is better)
Translates to: YRVGIERDHANGSCPLMVKRQGT*MAPALT
Trigger: AGTCAAAGCAGGTGCCATCCAAGTGCCTTGTCTCTT...CACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCTCTATGCCCACCCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS-3UTR TCA 90 bp ATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCCCAATAGAAGCCCATTaGAGCTCCAGAAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: IIRACGRRRQIVRCNQEAPIEAH*SSRRRD
Trigger: GTCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGG...GGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR TCA 90 bp AGAACTTACAGCTTTGATGCACCAGGAACTGTATTCAAGCTGAGGGCAAAAGCCCCTGAGTCGGGTATGTaGAAGCCTTTTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RTYSFDAPGTVFKLRAKAPESGM*KPFGAG
Trigger: TCCTGCCCCAAAAGGCTTTCACATACCCGACTCAGG...GGCTTTTGCCCTCAGCTTGAATACAGTTCCTGGTGCATCAAAGCTGTAAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp GGTGGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATTTTTGCTCTTTGCTCTaGCATGTTTTTCCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GGAIIRACGRRRQIVRCNFCSLL*HVFPGS
Trigger: AGAGCCCGGAAAAACATGGCAGAGCAAAGAGCAAAA...ATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp TACCAACCTCAAGGATTTTGTTTGATACAGAAAAGGATAGGGCTGGGCCCTTCTATGCTGCCTGGTAAGTaGTCAGCTGGCCTACTGGGC +
Preference number: 4 (lower is better)
Translates to: YQPQGFCLIQKRIGLGPSMLPGK*SAGLLG
Trigger: GCCCAGTAGGCCAGCTGAGCACTTACCAGGCAGCAT...AGAAGGGCCCAGCCCTATCCTTTTCTGTATCAAACAAAATCCTTGAGGTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp TTGAAAAGAACTGTGCGGATAGACTGGCGCAGTTTCACAGGATCCACAGGTTCAACTGTGCGGATAGACTaGCGCAGTTTCACAGGATCC +
Preference number: 4 (lower is better)
Translates to: LKRTVRIDWRSFTGSTGSTVRID*RSFTGS
Trigger: GGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGT...TGAACCTGTGGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGTTCTTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR CCA 90 bp AGAGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTACTGTGCGGATAGACTaGCGCAGTTTCACAGGATCC +
Preference number: 4 (lower is better)
Translates to: RERSRQWELSTHGVSCGFTVRID*RSFTGS
Trigger: GGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGT...AAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR CCA 90 bp TCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGAGAGGAAGACCACCATaGGGAAAGATATCATGCACT +
Preference number: 4 (lower is better)
Translates to: SLGRVAEGGKLLGAIRKPRGRPP*GKISCT
Trigger: AGTGCATGATATCTTTCCCCATGGTGGTCTTCCTCT...CGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp ATTCTTGCCGACCTGAATTCGGTAGCGAGAGATGAAGTTAGGTTTTCCTGTTGTTCCAGGAGGAACCAGTaGAAGGTGGGTAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: ILADLNSVARDEVRFSCCSRRNQ*KVGSSR
Trigger: CCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGA...ACAACAGGAAAACCTAACTTCATCTCTCGCTACCGAATTCAGGTCGGCAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR CCA 90 bp CGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCGGAGCTGTCCACTCATaGTGTTTCTTGTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: RRRQIVRCNQEAVSASHGGAVHS*CFLWIF
Trigger: GAAAATCCACAAGAAACACCATGAGTGGACAGCTCC...GCCATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp CCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGTATGTGAAAGCCTTTTaGGGCAGGAAGGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PSLGRVAEGGKLLGAIRKYVKAF*GRKGQS
Trigger: ACTTTGCCCCTTCCTGCCCCAAAAGGCTTTCACATA...CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp AGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCGGTCTCTCCACCATTTaGGGAAGGGATAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: REITPMGAVHSWCFLWIFGLSTI*GRDRGR
Trigger: TCTTCCTCTATCCCTTCCTCAAATGGTGGAGAGACC...GAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR TCA 90 bp GAGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTTTCCTTGTTGATCAGTaGGCCCTAGACAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: ERDHANGSCPLMVFLVDFFLVDQ*ALDRMR
Trigger: CCTCATCCTGTCTAGGGCTCACTGATCAACAAGGAA...AAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000524363.5
CDS-3UTR TCA 90 bp GAGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCCTCAGTTTCCTTGTTaGTCAGTGAGCCCTAGACAG +
Preference number: 4 (lower is better)
Translates to: ERDHANGSCPLMVFLVDFPQFPC*SVSPRQ
Trigger: CTGTCTAGGGCTCACTGATCAACAAGGAAACTGAGG...AAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524363.5
CDS-3UTR TCA 90 bp GAGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTGATCCACCATGTCACTaGGTTCCAGAAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: ERDHANGSCPLMVFLVDFDPPCH*VPEGHK
Trigger: TTTGTGGCCTTCTGGAACTCAGTGACATGGTGGATC...AAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521518.5
CDS-3UTR GCA 90 bp CCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGAGGCAAATTGTTAGGTaGAATCAGGAAGCCGTGTCT +
Preference number: 4 (lower is better)
Translates to: PSLGRVAEGGKLLGAIRKRQIVR*NQEAVS
Trigger: AGACACGGCTTCCTGATTGCACCTAACAATTTGCCT...CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR GCA 90 bp AGAACTTACAGCTTTGATGCACCAGGAACTGTATTCAAGCTGAGGGCAAAAGCCAGCCTTGTCATTCTCTaGATCCTGCCCAGGCCACAA +
Preference number: 4 (lower is better)
Translates to: RTYSFDAPGTVFKLRAKASLVIL*ILPRPQ
Trigger: TTGTGGCCTGGGCAGGATGCAGAGAATGACAAGGCT...GGCTTTTGCCCTCAGCTTGAATACAGTTCCTGGTGCATCAAAGCTGTAAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp CATGTTTTTCCGGGCTCTTTCTTCGGGGAGAAAGAGGGCTCTAACCTTTGGTCCAGACCTATAATGATTTaGCAGGGTGTCTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HVFPGSFFGEKEGSNLWSRPIMI*QGVLAL
Trigger: CAGAGCCAAGACACCCTGGCAAATCATTATAGGTCT...GGACCAAAGGTTAGAGCCCTCTTTCTCCCCGAAGAAAGAGCCCGGAAAAACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp AACCCAAGCAGCTGTGGTTTTGCCTTTGATAAGGTTCCTGGTAAAAATCATCTTTTTCAGCCCCCGCTTTaGTGGCTGTTGCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: NPSSCGFAFDKVPGKNHLFQPPL*WLLLLR
Trigger: CCGCAGCAGCAACAGCCACCAAAGCGGGGGCTGAAA...AAGATGATTTTTACCAGGAACCTTATCAAAGGCAAAACCACAGCTGCTTGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp TCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTAGAGAGAGATCACGCCAATaGGAGCTGTCCACTCATGGT +
Preference number: 4 (lower is better)
Translates to: SRQWELSTHGVSCGFSCRERSRQ*ELSTHG
Trigger: ACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTC...TCTACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
3UTR CAA 72 bp CTCAGAGTGTTTGGTGTGTGTATGTTTGTGTGTGTGTaGGGTGAAGTGGCGACTGGCATCTGGTATGTCATG +
Preference number: 4 (lower is better)
Translates to: LRVFGVCMFVCV*GEVATGIWYVM
Trigger: CATGACATACCAGATGCCAGTCGCCACTTCACCCAACACACACACAAACATACACACACCAAACACTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp AGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCAAGATGCCATGTCACTaGGTTCCAGAAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: REITPMGAVHSWCFLWIFKMPCH*VPEGHK
Trigger: TTTGTGGCCTTCTGGAACTCAGTGACATGGCATCTT...GAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524363.5
CDS-3UTR TCA 90 bp ATCCACAGGTTCATTCTTGCCGACCTGAATTCGGTAGCGAGAGATGAAGTTAGGCCAATAGAAGCCCATTaGAGCTCCAGAAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: IHRFILADLNSVARDEVRPIEAH*SSRRRD
Trigger: GTCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGG...CCTAACTTCATCTCTCGCTACCGAATTCAGGTCGGCAAGAATGAACCTGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR TCA 90 bp GGGAGAAAGAGGGCTCTAACCTTTGGTCCTCATTCAGATAGGCTAATTAGGGGTTCAAGGGCAGTAGTTTaGAGAAAGCCTCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: GRKRALTFGPHSDRLIRGSRAVV*RKPHPW
Trigger: CCAAGGATGAGGCTTTCTTCAAACTACTGCCCTTGA...ACCCCTAATTAGCCTATCTGAATGAGGACCAAAGGTTAGAGCCCTCTTTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR TCA 90 bp TCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTAGAGCCTGCTCACCGGTGTaGATAGTAGAACAAGACTTC +
Preference number: 4 (lower is better)
Translates to: SRQWELSTHGVSCGFSCRACSPV*IVEQDF
Trigger: GAAGTCTTGTTCTACTATTCACACCGGTGAGCAGGC...TCTACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524363.5
CDS-3UTR GCA 90 bp AGAACTTACAGCTTTGATGCACCAGGAACTGTATTCAAGCTGAGGGCAAAAGCCTTCTCCTTTCATCTCTaGAGTGGGCTGTGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RTYSFDAPGTVFKLRAKAFSFHL*SGLCPS
Trigger: GCTTGGACACAGCCCACTGCAGAGATGAAAGGAGAA...GGCTTTTGCCCTCAGCTTGAATACAGTTCCTGGTGCATCAAAGCTGTAAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp TCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTAGATTCTCCTTTCATCTCTaGAGTGGGCTGTGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SRQWELSTHGVSCGFSCRFSFHL*SGLCPS
Trigger: GCTTGGACACAGCCCACTGCAGAGATGAAAGGAGAA...TCTACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
CDS-3UTR CCA 90 bp ATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCAAGAGACAAGGCACTTaGATGGCACCTATAAAGAAG +
Preference number: 4 (lower is better)
Translates to: IIRACGRRRQIVRCNQEAKRQGT*MAPIKK
Trigger: CTTCTTTATAGGTGCCATCCAAGTGCCTTGTCTCTT...GGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CCA 90 bp CTTGTAGAATGTTGGGTGGTGAAGGAGCCTGGCCTCAGTTTCCTTGTTGATCAGGGAGCTGTCCACTCATaGTGTTTCTTGTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: LVECWVVKEPGLSFLVDQGAVHS*CFLWIF
Trigger: GAAAATCCACAAGAAACACCATGAGTGGACAGCTCC...CTGATCAACAAGGAAACTGAGGCCAGGCTCCTTCACCACCCAACATTCTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524363.5
CDS-3UTR TCA 90 bp GATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTACCAATAGAAGCCCATTaGAGCTCCAGAAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: DHANGSCPLMVFLVDFLVPIEAH*SSRRRD
Trigger: GTCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGG...TACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS-3UTR TCA 90 bp TCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTAGAGTGAAGGAGCCGGTGTaGATAGTAGAACAAGACTTC +
Preference number: 4 (lower is better)
Translates to: SRQWELSTHGVSCGFSCRVKEPV*IVEQDF
Trigger: GAAGTCTTGTTCTACTATTCACACCGGCTCCTTCAC...TCTACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
CDS-3UTR TCA 90 bp GGTGGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATGCATCTGGTATGTCATaGATTGAGACCTATAATGAT +
Preference number: 4 (lower is better)
Translates to: GGAIIRACGRRRQIVRCNASGMS*IETYND
Trigger: ATCATTATAGGTCTCAATTCATGACATACCAGATGC...ATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp AGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCAGAGGAAGACCACCATaGGGAAAGATATCATGCACT +
Preference number: 4 (lower is better)
Translates to: REITPMGAVHSWCFLWIFRGRPP*GKISCT
Trigger: AGTGCATGATATCTTTCCCCATGGTGGTCTTCCTCT...GAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR CCA 90 bp AGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCGGAGCTGTCCACTCATaGTGTTTCTTGTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: REITPMGAVHSWCFLWIFGAVHS*CFLWIF
Trigger: GAAAATCCACAAGAAACACCATGAGTGGACAGCTCC...GAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR CCA 90 bp TTAAAACGGGGCCTTTACCACTCACTCAGAGTGTTTGGTGTGTGTATGTTTGTGGTGATGGAGGACAAGTaGGAGCCCATTACTAATGGG +
Preference number: 4 (lower is better)
Translates to: LKRGLYHSLRVFGVCMFVVMEDK*EPITNG
Trigger: CCCATTAGTAATGGGCTCCCACTTGTCCTCCATCAC...CACAAACATACACACACCAAACACTCTGAGTGAGTGGTAAAGGCCCCGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR CAA 72 bp GCCAGGATGGGGACTTCAACCCAAGCAGCTGTGGTTTaGCCTTTGATAAGGTTCCTGGTAAAAATCATCTTG +
Preference number: 4 (lower is better)
Translates to: ARMGTSTQAAVV*PLIRFLVKIIL
Trigger: CAAGATGATTTTTACCAGGAACCTTATCAAAGGCAAAACCACAGCTGCTTGGGTTGAAGTCCCCATCCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR CAA 72 bp GGTCTTTCAAATCAAAGAGTGATCTTTAAATTGTTCTaGGGAACCACAGGGTTCCTGGCCATGTCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: GLSNQRVIFKLF*GTTGFLAMSGG
Trigger: GCCGCCAGACATGGCCAGGAACCCTGTGGTTCCCAAGAACAATTTAAAGATCACTCTTTGATTTGAAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp CCAACCTCAAGGATTTTGTTTGATACAGAAAAGGATAGGGCTGGGCCCTTCTGCCAGATGTGTCCCTCCTaGTTTGACTTTTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: PTSRILFDTEKDRAGPFCQMCPS*FDFSLC
Trigger: ACACAATGAAAAGTCAAAGCAGGAGGGACACATCTG...GCAGAAGGGCCCAGCCCTATCCTTTTCTGTATCAAACAAAATCCTTGAGGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp GAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGCAGATGTGTCCCTCCTaGTTTGACTTTTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: EITPMGAVHSWCFLWIFLQMCPS*FDFSLC
Trigger: ACACAATGAAAAGTCAAAGCAGGAGGGACACATCTG...CAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521518.5
CDS-3UTR CCA 90 bp CACATAAGGCTAAAGGTGTTAAAGTTTGGTCTGCACCTCGTTGGTTTTAATCCAACTGTGCGGATAGACTaGCGCAGTTTCACAGGATCC +
Preference number: 4 (lower is better)
Translates to: HIRLKVLKFGLHLVGFNPTVRID*RSFTGS
Trigger: GGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGT...TGGATTAAAACCAACGAGGTGCAGACCAAACTTTAACACCTTTAGCCTTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp AGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTAGAGGAAGACCACCATaGGGAAAGATATCATGCACT +
Preference number: 4 (lower is better)
Translates to: RSRQWELSTHGVSCGFSCRGRPP*GKISCT
Trigger: AGTGCATGATATCTTTCCCCATGGTGGTCTTCCTCT...ACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR CCA 90 bp GATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTAAGAGGAAGACCACCATaGGGAAAGATATCATGCACT +
Preference number: 4 (lower is better)
Translates to: DHANGSCPLMVFLVDFLVRGRPP*GKISCT
Trigger: AGTGCATGATATCTTTCCCCATGGTGGTCTTCCTCT...TACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR CCA 90 bp CACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTAGAAGGAGCTGTCCACTCATaGTGTTTCTTGTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: HANGSCPLMVFLVDFLVEGAVHS*CFLWIF
Trigger: GAAAATCCACAAGAAACACCATGAGTGGACAGCTCC...TTCTACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR CCA 90 bp GGTTTTTGGTTTCCACATAAGGCTAAAGGTGTTAAAGTTTGGTCTGCACCTCGTACCTTTTGTTTGCGGTaGGCCAGAGTTAAAACGGGG +
Preference number: 4 (lower is better)
Translates to: GFWFPHKAKGVKVWSAPRTFCLR*ARVKTG
Trigger: CCCCGTTTTAACTCTGGCCCACCGCAAACAAAAGGT...ACGAGGTGCAGACCAAACTTTAACACCTTTAGCCTTATGTGGAAACCAAAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp TTAAAACGGGGCCTTTACCACTCACTCAGAGTGTTTGGTGTGTGTATGTTTGTGAGGCAAATTGTTAGGTaGAATCAGGAAGCCGTGTCT +
Preference number: 4 (lower is better)
Translates to: LKRGLYHSLRVFGVCMFVRQIVR*NQEAVS
Trigger: AGACACGGCTTCCTGATTGCACCTAACAATTTGCCT...CACAAACATACACACACCAAACACTCTGAGTGAGTGGTAAAGGCCCCGTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp ATTCTTGCCGACCTGAATTCGGTAGCGAGAGATGAAGTTAGGTTTTCCTGTTGTAGAGGAAGACCACCATaGGGAAAGATATCATGCACT +
Preference number: 4 (lower is better)
Translates to: ILADLNSVARDEVRFSCCRGRPP*GKISCT
Trigger: AGTGCATGATATCTTTCCCCATGGTGGTCTTCCTCT...ACAACAGGAAAACCTAACTTCATCTCTCGCTACCGAATTCAGGTCGGCAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR CCA 90 bp AACCCAAGCAGCTGTGGTTTTGCCTTTGATAAGGTTCCTGGTAAAAATCATCTTTGTTTGTGTGTGTGTTaGGTGAAGTGGCGACTGGCA +
Preference number: 4 (lower is better)
Translates to: NPSSCGFAFDKVPGKNHLCLCVC*VKWRLA
Trigger: TGCCAGTCGCCACTTCACCCAACACACACACAAACA...AAGATGATTTTTACCAGGAACCTTATCAAAGGCAAAACCACAGCTGCTTGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp GGTTTTTGGTTTCCACATAAGGCTAAAGGTGTTAAAGTTTGGTCTGCACCTCGTGGAGCTGTCCACTCATaGTGTTTCTTGTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: GFWFPHKAKGVKVWSAPRGAVHS*CFLWIF
Trigger: GAAAATCCACAAGAAACACCATGAGTGGACAGCTCC...ACGAGGTGCAGACCAAACTTTAACACCTTTAGCCTTATGTGGAAACCAAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp TTATTTGTAGGAAGAGGTGATGAGTGCAGGCCAGCAGCTGAGAACTTACAGCTTCCAGCAGTTGGTTTTTaGTTTCCACATAAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: LFVGRGDECRPAAENLQLPAVGF*FPHKAK
Trigger: TTTAGCCTTATGTGGAAACCAAAAACCAACTGCTGG...AAGCTGTAAGTTCTCAGCTGCTGGCCTGCACTCATCACCTCTTCCTACAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp GTTGGTTTTTGGTTTCCACATAAGGCTAAAGGTGTTAAAGTTTGGTCTGCACCTAAAGGTGTTAAAGTTTaGTCTGCACCTCGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VGFWFPHKAKGVKVWSAPKGVKV*SAPRWF
Trigger: AAACCAACGAGGTGCAGACCAAACTTTAACACCTTT...AGGTGCAGACCAAACTTTAACACCTTTAGCCTTATGTGGAAACCAAAAACCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326080.10
3UTR CAA 72 bp AAGAAGGAGTCCATTTTGATAGTCCTGCCTGGAGACTaGGACCTAGCTGATACTAAGGTATTTTATAAAGCT +
Preference number: 4 (lower is better)
Translates to: KKESILIVLPGD*DLADTKVFYKA
Trigger: AGCTTTATAAAATACCTTAGTATCAGCTAGGTCCAAGTCTCCAGGCAGGACTATCAAAATGGACTCCTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CCA 90 bp GATAATGGTGGTCTTTCAAATCAAAGAGTGATCTTTAAATTGTTCTTGGGAACCAGAGGAAGACCACCATaGGGAAAGATATCATGCACT +
Preference number: 4 (lower is better)
Translates to: DNGGLSNQRVIFKLFLGTRGRPP*GKISCT
Trigger: AGTGCATGATATCTTTCCCCATGGTGGTCTTCCTCT...GGTTCCCAAGAACAATTTAAAGATCACTCTTTGATTTGAAAGACCACCATTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR GCA 90 bp GATAATGGTGGTCTTTCAAATCAAAGAGTGATCTTTAAATTGTTCTTGGGAACCAAGGATTTTGCTCTTTaGTCTGCCATGTTTTTCCGG +
Preference number: 4 (lower is better)
Translates to: DNGGLSNQRVIFKLFLGTKDFAL*SAMFFR
Trigger: CCGGAAAAACATGGCAGAGCAAAGAGCAAAATCCTT...GGTTCCCAAGAACAATTTAAAGATCACTCTTTGATTTGAAAGACCACCATTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp AAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGCCGCTTTGGTGGCTGTaGCTGCTGCGGCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: KMASSRRNQWKVGSSRRQPLWWL*LLRLCC
Trigger: GCAGCAGAGCCGCAGCAGCAACAGCCACCAAAGCGG...CTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
CDS CCA 90 bp AGGCTGACCACAGTGCCATGGGGCACCACAGGCAGGTCCAGAGCCTaGGCCAGGAATCAAGAGACCAGAACACTGGTCTTGACTGGCCAC +
Preference number: 5 (lower is better)
Translates to: RLTTVPWGTTGRSRA*ARNQETRTLVLTGH
Trigger: GTGGCCAGTCAAGACCAGTGTTCTGGTCTCTTGATTCCTGGCCCAGGCTCTGGACCTGCCTGTGGTGCCCCATGGCACTGTGGTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS-3UTR CAA 90 bp CGGGAAGCCGACCTTCCCTCTACCCTGGTGGTGCCATCATTAGGGCGTGTGGCCCCCCTCCTTTCAGCCTaGTCATTCTCTGCATCCTGC +
Preference number: 5 (lower is better)
Translates to: READLPSTLVVPSLGRVAPLLSA*SFSASC
Trigger: GCAGGATGCAGAGAATGACAAGGCTGAAAGGAGGGG...GGCCACACGCCCTAATGATGGCACCACCAGGGTAGAGGGAAGGTCGGCTTCCCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS TCA 90 bp ACTCCATCCTCTTTGGGGAGTCTGGGATGCTCTCAGAGAGCGGGGTaGAGCCCAGCAGGAGGACATGTCTCTCGTAGGCCTTGGTCTGCT +
Preference number: 5 (lower is better)
Translates to: TPSSLGSLGCSQRAG*SPAGGHVSRRPWSA
Trigger: AGCAGACCAAGGCCTACGAGAGACATGTCCTCCTGCTGGGCTTCACCCCGCTCTCTGAGAGCATCCCAGACTCCCCAAAGAGGATGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326080.10
ENST00000423554.5
ENST00000517938.5
ENST00000524250.5
CDS GCA 90 bp GCCTCCTGCCTTTACACCCAGCTCACTGCTGAGGCACAGCGGGAGTaGTGTAGGATCAGCATCTCAACCAACCAGGAAGGCACATCTGCG +
Preference number: 5 (lower is better)
Translates to: ASCLYTQLTAEAQRE*CRISISTNQEGTSA
Trigger: CGCAGATGTGCCTTCCTGGTTGGTTGAGATGCTGATCCTACAGCACTCCCGCTGTGCCTCAGCAGTGAGCTGGGTGTAAAGGCAGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517874.1
ENST00000519501.5
ENST00000522825.1
CDS GCA 90 bp CTGTCTCCATTCCTATGGGTAAAGTGGAGTTGCCTGCCTTCTCAGTaGCAGGCTGACCACAGTGCCATGGGGCACCACAGGCAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: LSPFLWVKWSCLPSQ*QADHSAMGHHRQVQ
Trigger: CTGGACCTGCCTGTGGTGCCCCATGGCACTGTGGTCAGCCTGGCACTGAGAAGGCAGGCAACTCCACTTTACCCATAGGAATGGAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS-3UTR CAA 90 bp ATGGTGATGGAGGACAAGTGGGAGCCCATTACTAATGGGCCCACTATCACCGGTCCGCTTTGGTGGCTGTaGCTGCTGCGGCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: MVMEDKWEPITNGPTITGPLWWL*LLRLCC
Trigger: GCAGCAGAGCCGCAGCAGCAACAGCCACCAAAGCGG...ACCGGTGATAGTGGGCCCATTAGTAATGGGCTCCCACTTGTCCTCCATCACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS-3UTR CAA 90 bp ATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCCCGCTTTGGTGGCTGTaGCTGCTGCGGCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: IIRACGRRRQIVRCNQEAPLWWL*LLRLCC
Trigger: GCAGCAGAGCCGCAGCAGCAACAGCCACCAAAGCGG...GGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CAA 90 bp CCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGGGTCTCTCCACCACCAATAGAAGCCCATaGAAGCTCCAGAAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: PGGTSGRWVAHGGRGLSTTNRSP*KLQKKR
Trigger: TCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGGT...GGTGGAGAGACCCCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000522825.1
CDS-3UTR CAA 90 bp CCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGGGTCTCTCCACCTGGATGGCACCTGCTTaGACTTTTCATTGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: PGGTSGRWVAHGGRGLSTWMAPA*TFHCVA
Trigger: TGCTACACAATGAAAAGTCAAAGCAGGTGCCATCCA...GGTGGAGAGACCCCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS GCA 90 bp GCACTGGTTGAACCTAGAAGAGAGAGGACGGCACTGCAGTGCCCATaGTGGAGGCTTCCGTGCAGATCCCATTTCATTTGTGCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: ALVEPRRERTALQCP*WRLPCRSHFICASL
Trigger: GAGGCTGGCACAAATGAAATGGGATCTGCACGGAAGCCTCCAGCATGGGCACTGCAGTGCCGTCCTCTCTCTTCTAGGTTCAACCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS GCA 90 bp AGCATCCACCCATTGCTGTCTCCATTCCTATGGGTAAAGTGGAGTTaGCTGCCTTCTCAGTGCCAGGCTGACCACAGTGCCATGGGGCAC +
Preference number: 5 (lower is better)
Translates to: SIHPLLSPFLWVKWS*LPSQCQADHSAMGH
Trigger: GTGCCCCATGGCACTGTGGTCAGCCTGGCACTGAGAAGGCAGGCAACTCCACTTTACCCATAGGAATGGAGACAGCAATGGGTGGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS CCA 90 bp CCCACACCTGTCACCACCATCCTGACCATCTGCATCAGAATAAGCTaGGGAGTTGCTACCAATGCATCTCCCGGGGGCCACTCCAAACCT +
Preference number: 5 (lower is better)
Translates to: PTPVTTILTICIRIS*GVATNASPGGHSKP
Trigger: AGGTTTGGAGTGGCCCCCGGGAGATGCATTGGTAGCAACTCCCCAGCTTATTCTGATGCAGATGGTCAGGATGGTGGTGACAGGTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS CCA 90 bp TGGGGGCCTGCCCAAGCATTTCCACCAGGGTCCACTGTACAGAGCTaGTCCCAAGTGTCCAAAGTCCATTTGGCCTCAATACTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: WGPAQAFPPGSTVQS*SQVSKVHLASILQP
Trigger: TGGCTGCAGTATTGAGGCCAAATGGACTTTGGACACTTGGGACCAGCTCTGTACAGTGGACCCTGGTGGAAATGCTTGGGCAGGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS GCA 90 bp AGAAGAGAGAGGACGGCACTGCAGTGCCCATGCTGGAGGCTTCCGTaGAGATCCCATTTCATTTGTGCCAGCCTCACACATTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: RRERTALQCPCWRLP*RSHFICASLTHFSA
Trigger: GGCTGAGAAATGTGTGAGGCTGGCACAAATGAAATGGGATCTGCACGGAAGCCTCCAGCATGGGCACTGCAGTGCCGTCCTCTCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS GCA 90 bp CCCATAGCACTGGTTGAACCTAGAAGAGAGAGGACGGCACTGCAGTaGCCATGCTGGAGGCTTCCGTGCAGATCCCATTTCATTTGTGCC +
Preference number: 5 (lower is better)
Translates to: PIALVEPRRERTALQ*PCWRLPCRSHFICA
Trigger: GGCACAAATGAAATGGGATCTGCACGGAAGCCTCCAGCATGGGCACTGCAGTGCCGTCCTCTCTCTTCTAGGTTCAACCAGTGCTATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS GCA 90 bp GACCAACTTGCTGGTTTTCACAGTGATGCTGTGAAGATGGGGGCCTaGCCAAGCATTTCCACCAGGGTCCACTGTACAGAGCTGGTCCCA +
Preference number: 5 (lower is better)
Translates to: DQLAGFHSDAVKMGA*PSISTRVHCTELVP
Trigger: TGGGACCAGCTCTGTACAGTGGACCCTGGTGGAAATGCTTGGGCAGGCCCCCATCTTCACAGCATCACTGTGAAAACCAGCAAGTTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CCA 90 bp CTGGTTGAACCTAGAAGAGAGAGGACGGCACTGCAGTGCCCATGCTaGAGGCTTCCGTGCAGATCCCATTTCATTTGTGCCAGCCTCACA +
Preference number: 5 (lower is better)
Translates to: LVEPRRERTALQCPC*RLPCRSHFICASLT
Trigger: TGTGAGGCTGGCACAAATGAAATGGGATCTGCACGGAAGCCTCCAGCATGGGCACTGCAGTGCCGTCCTCTCTCTTCTAGGTTCAACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS CCA 90 bp ATAACCCCTCTCTGCCTTCCAGCAAGATTAGCCCAGGCTCCCAGCTaGACAAGACGACTAGCCATTCTGAGGGTCAAGGAGAGACCACTG +
Preference number: 5 (lower is better)
Translates to: ITPLCLPARLAQAPS*TRRLAILRVKERPL
Trigger: CAGTGGTCTCTCCTTGACCCTCAGAATGGCTAGTCGTCTTGTCCAGCTGGGAGCCTGGGCTAATCTTGCTGGAAGGCAGAGAGGGGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523997.5
CDS TCA 90 bp CTGCTCACCGGTGTGAATAGTAGAACAAGACTTCCTCGATCAGCGTaGAGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: LLTGVNSRTRLPRSA*RWPAPGGTSGRWVA
Trigger: AGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCTTCACGCTGATCGAGGAAGTCTTGTTCTACTATTCACACCGGTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524363.5
CDS TCA 90 bp TGGGCCTGGAAACGTTGCAGAATAAGGCCCTGGCTGCTAGGCAGGTaGGTAATACCCCTGTCCTTGGAAACTTCAGCAGCCTTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: WAWKRCRIRPWLLGR*VIPLSLETSAAFSL
Trigger: CAGACTGAAGGCTGCTGAAGTTTCCAAGGACAGGGGTATTACTCACCTGCCTAGCAGCCAGGGCCTTATTCTGCAACGTTTCCAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS GCA 90 bp TGCAGAGATCAAGATCATCTGCCTCCTCAAGTGGTCCAGCCTCCCTaGAGTAGGCCCAGAGCAAAGAAGCAGGTAAGCCAAGGAACTGCT +
Preference number: 5 (lower is better)
Translates to: CRDQDHLPPQVVQPP*SRPRAKKQVSQGTA
Trigger: AGCAGTTCCTTGGCTTACCTGCTTCTTTGCTCTGGGCCTACTGCAGGGAGGCTGGACCACTTGAGGAGGCAGATGATCTTGATCTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS-3UTR CAA 90 bp TCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGGGTCTCTCCACTGCTTTGACTTTTCATaGTGTAGCATATGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: SRRNQWKVGSSRRQGSLHCFDFS*CSICPA
Trigger: AGCTGGACATATGCTACACAATGAAAAGTCAAAGCA...GTGGAGAGACCCCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
CDS-3UTR CAA 90 bp AGATGGCCAGCTCCAGGAGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGTGCTTTGACTTTTCATaGTGTAGCATATGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: RWPAPGGTSGRWVAHGGRCFDFS*CSICPA
Trigger: AGCTGGACATATGCTACACAATGAAAAGTCAAAGCA...CCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCTCCTGGAGCTGGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520581.5
ENST00000521518.5
CDS-3UTR CAA 90 bp TTTGAAGAAAGCCTCATCCTTGGCCCTGCTTTTCCGGGAAGCCGACCTTCCCTCAAGAAAGCCTCATCCTaGGCCCTGCTTTTCCGGGAA +
Preference number: 5 (lower is better)
Translates to: FEESLILGPAFPGSRPSLKKASS*ALLFRE
Trigger: TTCCCGGAAAAGCAGGGCCAAGGATGAGGCTTTCTT...GAGGGAAGGTCGGCTTCCCGGAAAAGCAGGGCCAAGGATGAGGCTTTCTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp TTTCCGGGAAGCCGACCTTCCCTCTACCCTGGTGGTGCCATCATTAGGGCGTGTAGGGAAACCTTTTGTTaGCGGTGGGCCAGAGTTAAA +
Preference number: 5 (lower is better)
Translates to: FPGSRPSLYPGGAIIRACRETFC*RWARVK
Trigger: TTTAACTCTGGCCCACCGCAAACAAAAGGTTTCCCT...ACACGCCCTAATGATGGCACCACCAGGGTAGAGGGAAGGTCGGCTTCCCGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp CCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCAAAGGGCAGCAACTTaGACCCCTCCCCTTGTGGGT +
Preference number: 5 (lower is better)
Translates to: PSLGRVAEGGKLLGAIRKQRAAT*TPPLVG
Trigger: ACCCACAAGGGGAGGGGTCAAAGTTGCTGCCCTTTG...CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp TTTGAAGAAAGCCTCATCCTTGGCCCTGCTTTTCCGGGAAGCCGACCTTCCCTCGTCCTGCCTGGAGACTaGGACCTAGCTGATACTAAG +
Preference number: 5 (lower is better)
Translates to: FEESLILGPAFPGSRPSLVLPGD*DLADTK
Trigger: CTTAGTATCAGCTAGGTCCAAGTCTCCAGGCAGGAC...GAGGGAAGGTCGGCTTCCCGGAAAAGCAGGGCCAAGGATGAGGCTTTCTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS TCA 90 bp CAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCTaGGGGACAGCCAGGATGACACTTAGGCTGTCTCTCACTCCATCC +
Preference number: 5 (lower is better)
Translates to: QIVRCNQEAVSASHG*GTARMTLRLSLTPS
Trigger: GGATGGAGTGAGAGACAGCCTAAGTGTCATCCTGGCTGTCCCTCAGCCATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326080.10
ENST00000423554.5
ENST00000517938.5
ENST00000524250.5
CDS GCA 90 bp CATCCTGACCATCTGCATCAGAATAAGCTGGGGAGTTGCTACCAATaGATCTCCCGGGGGCCACTCCAAACCTGCAATTTGCCGTATCTG +
Preference number: 5 (lower is better)
Translates to: HPDHLHQNKLGSCYQ*ISRGPLQTCNLPYL
Trigger: CAGATACGGCAAATTGCAGGTTTGGAGTGGCCCCCGGGAGATGCATTGGTAGCAACTCCCCAGCTTATTCTGATGCAGATGGTCAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS CCA 90 bp CCCTCCCCATTTCTCTGGCCAGGCCCCATGTATTTACAGGTAACTTaGGTAGCCTCCATGGTGCTTGGAGAAGGCTGTGACTTTCTGAGT +
Preference number: 5 (lower is better)
Translates to: PSPFLWPGPMYLQVT*VASMVLGEGCDFLS
Trigger: ACTCAGAAAGTCACAGCCTTCTCCAAGCACCATGGAGGCTACCCAAGTTACCTGTAAATACATGGGGCCTGGCCAGAGAAATGGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CCA 90 bp GGGAAAGATATCATGCACTGGTTGAAAAGAACTGTGCGGATAGACTaGCGCAGTTTCACAGGATCCACCTGCCCAAGGGAAGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GKDIMHWLKRTVRID*RSFTGSTCPREGRR
Trigger: CCTCCTCCCTTCCCTTGGGCAGGTGGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGTTCTTTTCAACCAGTGCATGATATCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS-3UTR CAA 90 bp AGGAACCAGTGGAAGGTGGGTAGCTCACGGCGGCAGGGGTCTCTCCACCATTTGGATATCATGCACTGGTaGAAAAGAACTGTGCGGATA +
Preference number: 5 (lower is better)
Translates to: RNQWKVGSSRRQGSLHHLDIMHW*KRTVRI
Trigger: TATCCGCACAGTTCTTTTCAACCAGTGCATGATATC...CAAATGGTGGAGAGACCCCTGCCGCCGTGAGCTACCCACCTTCCACTGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000522825.1
CDS-3UTR CAA 90 bp CTGGTGGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAGCCGAAGGAGGCAAATaGTTAGGTGCAATCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LVVPSLGRVAEGGKLLGAAEGGK*LGAIRK
Trigger: CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGC...TGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS CCA 90 bp ATCAGCATCTCAACCAACCAGGAAGGCACATCTGCGTTTTCCAGCTaGCCTTTTCCAGCTTCTGTGGGAGCCTCTTCCTTATCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: ISISTNQEGTSAFSS*PFPASVGASSLSGA
Trigger: AGCTCCTGATAAGGAAGAGGCTCCCACAGAAGCTGGAAAAGGCCAGCTGGAAAACGCAGATGTGCCTTCCTGGTTGGTTGAGATGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517874.1
ENST00000519501.5
CDS CCA 90 bp TATTCTAGCATCCACCCATTGCTGTCTCCATTCCTATGGGTAAAGTaGAGTTGCCTGCCTTCTCAGTGCCAGGCTGACCACAGTGCCATG +
Preference number: 5 (lower is better)
Translates to: YSSIHPLLSPFLWVK*SCLPSQCQADHSAM
Trigger: CATGGCACTGTGGTCAGCCTGGCACTGAGAAGGCAGGCAACTCCACTTTACCCATAGGAATGGAGACAGCAATGGGTGGATGCTAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS CCA 90 bp CAGGGTCCACTGTACAGAGCTGGTCCCAAGTGTCCAAAGTCCATTTaGCCTCAATACTGCAGCCAATATTTCCCCCAGAATCAGCAACCC +
Preference number: 5 (lower is better)
Translates to: QGPLYRAGPKCPKSI*PQYCSQYFPQNQQP
Trigger: GGGTTGCTGATTCTGGGGGAAATATTGGCTGCAGTATTGAGGCCAAATGGACTTTGGACACTTGGGACCAGCTCTGTACAGTGGACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CCA 90 bp TCTTCCTGGTTCTGCACATTATCACCACTGCCCTCCCCATTTCTCTaGCCAGGCCCCATGTATTTACAGGTAACTTGGGTAGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: SSWFCTLSPLPSPFL*PGPMYLQVTWVASM
Trigger: CATGGAGGCTACCCAAGTTACCTGTAAATACATGGGGCCTGGCCAGAGAAATGGGGAGGGCAGTGGTGATAATGTGCAGAACCAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS-3UTR CAA 90 bp GTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCTGAGGGACAGCCAGGATGACGATATCATGCACTGGTaGAAAAGAACTGTGCGGATA +
Preference number: 5 (lower is better)
Translates to: VQSGSRVCIPWLRDSQDDDIMHW*KRTVRI
Trigger: TATCCGCACAGTTCTTTTCAACCAGTGCATGATATC...GTCATCCTGGCTGTCCCTCAGCCATGGGATGCAGACACGGCTTCCTGATTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CAA 90 bp GGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGCCGAAGGAGGCAAATaGTTAGGTGCAATCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GRRRQIVRCNQEAVSASHAEGGK*LGAIRK
Trigger: CTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGC...ATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CAA 90 bp GAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCTACAGAGGGAAACCTTTaGTTTGCGGTGGGCCAGAGT +
Preference number: 5 (lower is better)
Translates to: EGGKLLGAIRKPCLHPMATEGNL*FAVGQS
Trigger: ACTCTGGCCCACCGCAAACAAAAGGTTTCCCTCTGT...AGCCATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp ATGATGAGGGCCAAGGAAAACCACATGGTGATGGAGGACAAGTGGGAGCCCATTGAAGAGACAAGGCACTaGGATGGCACCTGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: MMRAKENHMVMEDKWEPIEETRH*DGTCFD
Trigger: GTCAAAGCAGGTGCCATCCAAGTGCCTTGTCTCTTC...AATGGGCTCCCACTTGTCCTCCATCACCATGTGGTTTTCCTTGGCCCTCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS TCA 90 bp CCCATTGAAGCTCCAGAAGAAGAGACAAGGCACTTGGATGGCACCTaGGATTGGGAAACAGAAACAGTCAGGGCGACTTTGGGTTCTCAC +
Preference number: 5 (lower is better)
Translates to: PIEAPEEETRHLDGT*DWETETVRATLGSH
Trigger: GTGAGAACCCAAAGTCGCCCTGACTGTTTCTGTTTCCCAATCTCAGGTGCCATCCAAGTGCCTTGTCTCTTCTTCTGGAGCTTCAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519258.1
CDS TCA 90 bp TTATCCAGCTTCTTGACCAACTTGCTGGTTTTCACAGTGATGCTGTaGAGATGGGGGCCTGCCCAAGCATTTCCACCAGGGTCCACTGTA +
Preference number: 5 (lower is better)
Translates to: LSSFLTNLLVFTVML*RWGPAQAFPPGSTV
Trigger: TACAGTGGACCCTGGTGGAAATGCTTGGGCAGGCCCCCATCTTCACAGCATCACTGTGAAAACCAGCAAGTTGGTCAAGAAGCTGGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CCA 90 bp TGTTACCCATATTCTAGCATCCACCCATTGCTGTCTCCATTCCTATaGGTAAAGTGGAGTTGCCTGCCTTCTCAGTGCCAGGCTGACCAC +
Preference number: 5 (lower is better)
Translates to: CYPYSSIHPLLSPFL*VKWSCLPSQCQADH
Trigger: GTGGTCAGCCTGGCACTGAGAAGGCAGGCAACTCCACTTTACCCATAGGAATGGAGACAGCAATGGGTGGATGCTAGAATATGGGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS-3UTR CAA 90 bp GTTGGTTTTTGGTTTCCACATAAGGCTAAAGGTGTTAAAGTTTGGTCTGCACCTCCGCTTTGGTGGCTGTaGCTGCTGCGGCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VGFWFPHKAKGVKVWSAPPLWWL*LLRLCC
Trigger: GCAGCAGAGCCGCAGCAGCAACAGCCACCAAAGCGG...AGGTGCAGACCAAACTTTAACACCTTTAGCCTTATGTGGAAACCAAAAACCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp GTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCTGCTGAGGTCCTaGCACAGGTCAAATCTAAGT +
Preference number: 5 (lower is better)
Translates to: VPSLGRVAEGGKLLGAIRKLLRS*HRSNLS
Trigger: ACTTAGATTTGACCTGTGCAAGGACCTCAGCAGCTT...CCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CAA 90 bp GTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGATCACCGGTAGCATGTaGGAGACTGCATGCTCTATA +
Preference number: 5 (lower is better)
Translates to: VPSLGRVAEGGKLLGAIRITGSM*ETACSI
Trigger: TATAGAGCATGCAGTCTCCAACATGCTACCGGTGAT...CCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CAA 90 bp GTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGCAAGCAGCTGTGGTTTaGCCTTTGATAAGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: VPSLGRVAEGGKLLGAIRQAAVV*PLIRFL
Trigger: CAGGAACCTTATCAAAGGCAAAACCACAGCTGCTTG...CCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp ATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGAAGAAGGAGTCCATTTaGATAGTCCTGCCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: IRACGRRRQIVRCNQEAVKKESI*IVLPGD
Trigger: GTCTCCAGGCAGGACTATCAAAATGGACTCCTTCTT...CACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS GCA 90 bp TACAGAGCTGGTCCCAAGTGTCCAAAGTCCATTTGGCCTCAATACTaGAGCCAATATTTCCCCCAGAATCAGCAACCCTTTGACCCTTCC +
Preference number: 5 (lower is better)
Translates to: YRAGPKCPKSIWPQY*SQYFPQNQQPFDPS
Trigger: GGAAGGGTCAAAGGGTTGCTGATTCTGGGGGAAATATTGGCTGCAGTATTGAGGCCAAATGGACTTTGGACACTTGGGACCAGCTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS-3UTR CAA 90 bp GTGGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCTGTGTCCCTCCTGCTTaGACTTTTCATTGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: VVPSLGRVAEGGKLLGAICVPPA*TFHCVA
Trigger: TGCTACACAATGAAAAGTCAAAGCAGGAGGGACACA...GATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp GGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGAGACAAGGCACTaGGATGGCACCTATAAAGAA +
Preference number: 5 (lower is better)
Translates to: GAIIRACGRRRQIVRCNQEETRH*DGTYKE
Trigger: TTCTTTATAGGTGCCATCCAAGTGCCTTGTCTCTTC...CTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CAA 90 bp GGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGAAGAGACAAGGCACTaGGATGGCACCTATAAAGAA +
Preference number: 5 (lower is better)
Translates to: GRRRQIVRCNQEAVSASHEETRH*DGTYKE
Trigger: TTCTTTATAGGTGCCATCCAAGTGCCTTGTCTCTTC...ATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CAA 90 bp ATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGACCAATAGAAGCCCATaGAAGCTCCAGAAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: IRACGRRRQIVRCNQEAVTNRSP*KLQKKR
Trigger: TCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGGT...CACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CAA 90 bp TGTGCGGATAGACTGGCGCAGTTTCACAGGATCCACAGGTTCATTCTTGCCGACACCAATAGAAGCCCATaGAAGCTCCAGAAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: CADRLAQFHRIHRFILADTNRSP*KLQKKR
Trigger: TCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGGT...GTCGGCAAGAATGAACCTGTGGATCCTGTGAAACTGCGCCAGTCTATCCGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR CAA 90 bp TTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTATCAAGGGCAGTAGTTaGAAGAAAGCCTCATCCTTG +
Preference number: 5 (lower is better)
Translates to: LGRVAEGGKLLGAIRKPCIKGSS*KKASSL
Trigger: CAAGGATGAGGCTTTCTTCAAACTACTGCCCTTGAT...ACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp TTTGAAGAAAGCCTCATCCTTGGCCCTGCTTTTCCGGGAAGCCGACCTTCCCTCATCTTTAAATTGTTCTaGGGAACCACAGGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: FEESLILGPAFPGSRPSLIFKLF*GTTGFL
Trigger: CAGGAACCCTGTGGTTCCCAAGAACAATTTAAAGAT...GAGGGAAGGTCGGCTTCCCGGAAAAGCAGGGCCAAGGATGAGGCTTTCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp ATCCACAGGTTCATTCTTGCCGACCTGAATTCGGTAGCGAGAGATGAAGTTAGGGAAGAGACAAGGCACTaGGATGGCACCATGTCACTG +
Preference number: 5 (lower is better)
Translates to: IHRFILADLNSVARDEVREETRH*DGTMSL
Trigger: CAGTGACATGGTGCCATCCAAGTGCCTTGTCTCTTC...CCTAACTTCATCTCTCGCTACCGAATTCAGGTCGGCAAGAATGAACCTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS CCA 90 bp GGGAAAGATATCATGCACTGGTTGAAAAGAACTGTGCGGATAGACTaGCGCAGTTTCACAGGATCCACCATGTCACTGAGTTCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GKDIMHWLKRTVRID*RSFTGSTMSLSSRR
Trigger: CCTTCTGGAACTCAGTGACATGGTGGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGTTCTTTTCAACCAGTGCATGATATCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521518.5
CDS-3UTR CAA 90 bp TTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCTGAGGGACAGCCATGCTTTGACTTTTCATaGTGTAGCATATGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LLGAIRKPCLHPMAEGQPCFDFS*CSICPA
Trigger: AGCTGGACATATGCTACACAATGAAAAGTCAAAGCA...TGGCTGTCCCTCAGCCATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp CGAAGGAGGCAAATTGTTAGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCGATATCATGCACTGGTaGAAAAGAACTGTGCGGATA +
Preference number: 5 (lower is better)
Translates to: RRRQIVRCNQEAVSASHGDIMHW*KRTVRI
Trigger: TATCCGCACAGTTCTTTTCAACCAGTGCATGATATC...GCCATGGGATGCAGACACGGCTTCCTGATTGCACCTAACAATTTGCCTCCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326080.10
ENST00000517938.5
CDS-3UTR CAA 90 bp GGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGAAAGGATTTTGCTCTTaGCTCTGCCATGTTTTTCCG +
Preference number: 5 (lower is better)
Translates to: GAIIRACGRRRQIVRCNQKGFCS*LCHVFP
Trigger: CGGAAAAACATGGCAGAGCAAAGAGCAAAATCCTTT...CTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS CCA 90 bp TTTCAGCCATTTAGCCCCTCTTCATCAGAGAACCTTGTTCATGATTaGATGCAGAGATCAAGATCATCTGCCTCCTCAAGTGGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: FQPFSPSSSENLVHD*MQRSRSSASSSGPA
Trigger: GGCTGGACCACTTGAGGAGGCAGATGATCTTGATCTCTGCATCCAATCATGAACAAGGTTCTCTGATGAAGAGGGGCTAAATGGCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS-3UTR CAA 90 bp CTGGTTGAAAAGAACTGTGCGGATAGACTGGCGCAGTTTCACAGGATCCACAGGGATATCATGCACTGGTaGAAAAGAACTGTGCGGATA +
Preference number: 5 (lower is better)
Translates to: LVEKNCADRLAQFHRIHRDIMHW*KRTVRI
Trigger: TATCCGCACAGTTCTTTTCAACCAGTGCATGATATC...CCTGTGGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGTTCTTTTCAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS-3UTR CAA 90 bp GGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGCCTCAAGGATTTTGTTaGATACAGAAAAGGATAGGG +
Preference number: 5 (lower is better)
Translates to: GAIIRACGRRRQIVRCNQPQGFC*IQKRIG
Trigger: CCCTATCCTTTTCTGTATCAAACAAAATCCTTGAGG...CTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS CCA 90 bp TCTGAGGTTGTGGGCAAATTATTTCCTCTCTTTAACCTTCTAAACTaGGGGAGCCTTGTTGCTAATAACTTGGCTCACACTGGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: SEVVGKLFPLFNLLN*GSLVANNLAHTGQV
Trigger: GACCTGGCCAGTGTGAGCCAAGTTATTAGCAACAAGGCTCCCCCAGTTTAGAAGGTTAAAGAGAGGAAATAATTTGCCCACAACCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS CCA 90 bp GCCACCGCCCACACATTCAGAATCCATACTATCCGTCTATTACAGTaGAGTTATCCATTGTTTTCGCAGCTGTCTCCCTCTCTCATAACA +
Preference number: 5 (lower is better)
Translates to: ATAHTFRIHTIRLLQ*SYPLFSQLSPSLIT
Trigger: TGTTATGAGAGAGGGAGACAGCTGCGAAAACAATGGATAACTCCACTGTAATAGACGGATAGTATGGATTCTGAATGTGTGGGCGGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS-3UTR CAA 90 bp AGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTATCACCGGTAGCATGTaGGAGACTGCATGCTCTATA +
Preference number: 5 (lower is better)
Translates to: RSRQWELSTHGVSCGFSCITGSM*ETACSI
Trigger: TATAGAGCATGCAGTCTCCAACATGCTACCGGTGAT...ACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS-3UTR CAA 90 bp GGTGCCATCATTAGGGCGTGTGGCCGAAGGAGGCAAATTGTTAGGTGCAATCAGCTGGTATGTCATGAATaGAGACCTATAATGATTTGC +
Preference number: 5 (lower is better)
Translates to: GAIIRACGRRRQIVRCNQLVCHE*RPIMIC
Trigger: GCAAATCATTATAGGTCTCAATTCATGACATACCAG...CTGATTGCACCTAACAATTTGCCTCCTTCGGCCACACGCCCTAATGATGGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS TCA 90 bp GCCCACAGTCTGAGAATCTCTAGCAGAACTAGGCTTCTTCAGGTATaGGATCACCAGCATCAGAATCCCCTGGAACACTTAACTAAAATG +
Preference number: 5 (lower is better)
Translates to: AHSLRISSRTRLLQV*DHQHQNPLEHLTKM
Trigger: CATTTTAGTTAAGTGTTCCAGGGGATTCTGATGCTGGTGATCTCATACCTGAAGAAGCCTAGTTCTGCTAGAGATTCTCAGACTGTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS-3UTR CAA 90 bp GATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTATGTGTCCCTCCTGCTTaGACTTTTCATTGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: DHANGSCPLMVFLVDFLVCVPPA*TFHCVA
Trigger: TGCTACACAATGAAAAGTCAAAGCAGGAGGGACACA...TACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521518.5
CDS-3UTR CAA 90 bp AGAGAGATCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCGATATCATGCACTGGTaGAAAAGAACTGTGCGGATA +
Preference number: 5 (lower is better)
Translates to: REITPMGAVHSWCFLWIFDIMHW*KRTVRI
Trigger: TATCCGCACAGTTCTTTTCAACCAGTGCATGATATC...GAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGATCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR CAA 90 bp TACCAACCTCAAGGATTTTGTTTGATACAGAAAAGGATAGGGCTGGGCCCTTCTGAGACCTATAATGATTaGCCAGGGTGTCTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: YQPQGFCLIQKRIGLGPSETYND*PGCLGS
Trigger: AGAGCCAAGACACCCTGGCAAATCATTATAGGTCTC...AGAAGGGCCCAGCCCTATCCTTTTCTGTATCAAACAAAATCCTTGAGGTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp TCACGCCAATGGGAGCTGTCCACTCATGGTGTTTCTTGTGGATTTTCTTGTAGAGATATCATGCACTGGTaGAAAAGAACTGTGCGGATA +
Preference number: 5 (lower is better)
Translates to: SRQWELSTHGVSCGFSCRDIMHW*KRTVRI
Trigger: TATCCGCACAGTTCTTTTCAACCAGTGCATGATATC...TCTACAAGAAAATCCACAAGAAACACCATGAGTGGACAGCTCCCATTGGCGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520581.5
ENST00000521518.5
ENST00000524363.5
CDS-3UTR CAA 90 bp CACATAAGGCTAAAGGTGTTAAAGTTTGGTCTGCACCTCGTTGGTTTTAATCCATTGGTCTGCACCTCGTaGGTTTTAATCCAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: HIRLKVLKFGLHLVGFNPLVCTS*VLIQGG
Trigger: TCCTCCCTGGATTAAAACCAACGAGGTGCAGACCAA...TGGATTAAAACCAACGAGGTGCAGACCAAACTTTAACACCTTTAGCCTTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp AACCCAAGCAGCTGTGGTTTTGCCTTTGATAAGGTTCCTGGTAAAAATCATCTTGGGGGAGAAAGGATTTaGCTCTTTGCTCTGCCATGT +
Preference number: 5 (lower is better)
Translates to: NPSSCGFAFDKVPGKNHLGGERI*LFALPC
Trigger: ACATGGCAGAGCAAAGAGCAAAATCCTTTCTCCCCC...AAGATGATTTTTACCAGGAACCTTATCAAAGGCAAAACCACAGCTGCTTGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp CACATAAGGCTAAAGGTGTTAAAGTTTGGTCTGCACCTCGTTGGTTTTAATCCAATCACCGGTAGCATGTaGGAGACTGCATGCTCTATA +
Preference number: 5 (lower is better)
Translates to: HIRLKVLKFGLHLVGFNPITGSM*ETACSI
Trigger: TATAGAGCATGCAGTCTCCAACATGCTACCGGTGAT...TGGATTAAAACCAACGAGGTGCAGACCAAACTTTAACACCTTTAGCCTTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp CACATAAGGCTAAAGGTGTTAAAGTTTGGTCTGCACCTCGTTGGTTTTAATCCAGCTGTGGTTTTGCCTTaGATAAGGTTCCTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: HIRLKVLKFGLHLVGFNPAVVLP*IRFLVK
Trigger: TTTTACCAGGAACCTTATCAAAGGCAAAACCACAGC...TGGATTAAAACCAACGAGGTGCAGACCAAACTTTAACACCTTTAGCCTTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp GATAATGGTGGTCTTTCAAATCAAAGAGTGATCTTTAAATTGTTCTTGGGAACCACCAATAGAAGCCCATaGAAGCTCCAGAAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: DNGGLSNQRVIFKLFLGTTNRSP*KLQKKR
Trigger: TCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGGT...GGTTCCCAAGAACAATTTAAAGATCACTCTTTGATTTGAAAGACCACCATTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS-3UTR CAA 90 bp GTTGGTTTTTGGTTTCCACATAAGGCTAAAGGTGTTAAAGTTTGGTCTGCACCTTTTTTCAGCCTTAACTaGTATACCAACCTCAAGGAT +
Preference number: 5 (lower is better)
Translates to: VGFWFPHKAKGVKVWSAPFFSLN*YTNLKD
Trigger: ATCCTTGAGGTTGGTATACAAGTTAAGGCTGAAAAA...AGGTGCAGACCAAACTTTAACACCTTTAGCCTTATGTGGAAACCAAAAACCAAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000326080.10
CDS GCA 72 bp GGAGGGCAGGGAAGTGTCAGACCCCAGCAAGCCTCCTaGCTTTACACCCAGCTCACTGCTGAGGCACAGCGG +
Preference number: 6 (lower is better)
Translates to: GGQGSVRPQQAS*LYTQLTAEAQR
Trigger: CCGCTGTGCCTCAGCAGTGAGCTGGGTGTAAAGGCAGGAGGCTTGCTGGGGTCTGACACTTCCCTGCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517874.1
ENST00000519501.5
ENST00000522825.1
CDS TCA 72 bp TTCTGGGAGAGATGTCGGGGGACAGCCAGTAGCTCCTaGCTGCCACCCAGCTCTGGGCCTGGAAACGTTGCA +
Preference number: 6 (lower is better)
Translates to: FWERCRGTASSS*LPPSSGPGNVA
Trigger: TGCAACGTTTCCAGGCCCAGAGCTGGGTGGCAGTCAGGAGCTACTGGCTGTCCCCCGACATCTCTCCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS TCA 72 bp TCTTTGGGGAGTCTGGGATGCTCTCAGAGAGCGGGGTaGAGCCCAGCAGGAGGACATGTCTCTCGTAGGCCT +
Preference number: 6 (lower is better)
Translates to: SLGSLGCSQRAG*SPAGGHVSRRP
Trigger: AGGCCTACGAGAGACATGTCCTCCTGCTGGGCTTCACCCCGCTCTCTGAGAGCATCCCAGACTCCCCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326080.10
ENST00000423554.5
ENST00000517938.5
ENST00000524250.5
CDS CCA 72 bp ACAGTGCCATGGGGCACCACAGGCAGGTCCAGAGCCTaGGCCAGGAATCAAGAGACCAGAACACTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: TVPWGTTGRSRA*ARNQETRTLVL
Trigger: CAAGACCAGTGTTCTGGTCTCTTGATTCCTGGCCCAGGCTCTGGACCTGCCTGTGGTGCCCCATGGCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS CAA 90 bp GGGATTTCTGCCCCAAAGCGCGACAGGTTCAGAATGGTCCCCAGCTaGAGGCCTGCCTCTTCCTCCAGCCTTTCCAGGCACTGCATGCAT +
Preference number: 6 (lower is better)
Translates to: GISAPKRDRFRMVPS*RPASSSSLSRHCMH
Trigger: ATGCATGCAGTGCCTGGAAAGGCTGGAGGAAGAGGCAGGCCTCAAGCTGGGGACCATTCTGAACCTGTCGCGCTTTGGGGCAGAAATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS TCA 72 bp AGGTGCAATCAGGAAGCCGTGTCTGCATCCCATGGCTaGGGGACAGCCAGGATGACACTTAGGCTGTCTCTC +
Preference number: 6 (lower is better)
Translates to: RCNQEAVSASHG*GTARMTLRLSL
Trigger: GAGAGACAGCCTAAGTGTCATCCTGGCTGTCCCTCAGCCATGGGATGCAGACACGGCTTCCTGATTGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326080.10
ENST00000423554.5
ENST00000517938.5
ENST00000524250.5
CDS GCA 72 bp AGGACGGCACTGCAGTGCCCATGCTGGAGGCTTCCGTaGAGATCCCATTTCATTTGTGCCAGCCTCACACAT +
Preference number: 6 (lower is better)
Translates to: RTALQCPCWRLP*RSHFICASLTH
Trigger: ATGTGTGAGGCTGGCACAAATGAAATGGGATCTGCACGGAAGCCTCCAGCATGGGCACTGCAGTGCCGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS GCA 72 bp CTGGTTGAACCTAGAAGAGAGAGGACGGCACTGCAGTaGCCATGCTGGAGGCTTCCGTGCAGATCCCATTTC +
Preference number: 6 (lower is better)
Translates to: LVEPRRERTALQ*PCWRLPCRSHF
Trigger: GAAATGGGATCTGCACGGAAGCCTCCAGCATGGGCACTGCAGTGCCGTCCTCTCTCTTCTAGGTTCAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS GCA 72 bp GTGCGGATAGACTGGCGCAGTTTCACAGGATCCACCTaGCCAAGGGAAGGGAGGAGGGAGATGGATAAGAGT +
Preference number: 6 (lower is better)
Translates to: VRIDWRSFTGST*PREGRREMDKS
Trigger: ACTCTTATCCATCTCCCTCCTCCCTTCCCTTGGGCAGGTGGATCCTGTGAAACTGCGCCAGTCTATCCGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CCA 72 bp GTCACCACCATCCTGACCATCTGCATCAGAATAAGCTaGGGAGTTGCTACCAATGCATCTCCCGGGGGCCAC +
Preference number: 6 (lower is better)
Translates to: VTTILTICIRIS*GVATNASPGGH
Trigger: GTGGCCCCCGGGAGATGCATTGGTAGCAACTCCCCAGCTTATTCTGATGCAGATGGTCAGGATGGTGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS CCA 72 bp CCTAGAAGAGAGAGGACGGCACTGCAGTGCCCATGCTaGAGGCTTCCGTGCAGATCCCATTTCATTTGTGCC +
Preference number: 6 (lower is better)
Translates to: PRRERTALQCPC*RLPCRSHFICA
Trigger: GGCACAAATGAAATGGGATCTGCACGGAAGCCTCCAGCATGGGCACTGCAGTGCCGTCCTCTCTCTTCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS CAA 90 bp TGTGTCCCTCCTCTGCAGTGGGCTGTGTCCAAGCTGCTGAGGTCCTaGCACAGGTCAAATCTAAGTTCTCTTCCCTTTCAGCCCCCGCTT +
Preference number: 6 (lower is better)
Translates to: CVPPLQWAVSKLLRS*HRSNLSSLPFQPPL
Trigger: AAGCGGGGGCTGAAAGGGAAGAGAACTTAGATTTGACCTGTGCAAGGACCTCAGCAGCTTGGACACAGCCCACTGCAGAGGAGGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517938.5
ENST00000518651.5
CDS GCA 72 bp CATCCTGACCATCTGCATCAGAATAAGCTGGGGAGTTaGTACCAATGCATCTCCCGGGGGCCACTCCAAACC +
Preference number: 6 (lower is better)
Translates to: HPDHLHQNKLGS*YQCISRGPLQT
Trigger: GGTTTGGAGTGGCCCCCGGGAGATGCATTGGTAGCAACTCCCCAGCTTATTCTGATGCAGATGGTCAGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS GCA 72 bp GCTGGTTTTCACAGTGATGCTGTGAAGATGGGGGCCTaGCCAAGCATTTCCACCAGGGTCCACTGTACAGAG +
Preference number: 6 (lower is better)
Translates to: AGFHSDAVKMGA*PSISTRVHCTE
Trigger: CTCTGTACAGTGGACCCTGGTGGAAATGCTTGGGCAGGCCCCCATCTTCACAGCATCACTGTGAAAACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS GCA 72 bp CAAGATCATCTGCCTCCTCAAGTGGTCCAGCCTCCCTaGAGTAGGCCCAGAGCAAAGAAGCAGGTAAGCCAA +
Preference number: 6 (lower is better)
Translates to: QDHLPPQVVQPP*SRPRAKKQVSQ
Trigger: TTGGCTTACCTGCTTCTTTGCTCTGGGCCTACTGCAGGGAGGCTGGACCACTTGAGGAGGCAGATGATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS TCA 72 bp ACCAGTGCCTGCTATCAGAAGCTTAAGGAGGGAGGGTaGTGGTTGTTGCCTAGGGACCCATTGTGGGGAGAA +
Preference number: 6 (lower is better)
Translates to: TSACYQKLKEGG*WLLPRDPLWGE
Trigger: TTCTCCCCACAATGGGTCCCTAGGCAACAACCATCACCCTCCCTCCTTAAGCTTCTGATAGCAGGCACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS GCA 72 bp GAACCTAGAAGAGAGAGGACGGCACTGCAGTGCCCATaGTGGAGGCTTCCGTGCAGATCCCATTTCATTTGT +
Preference number: 6 (lower is better)
Translates to: EPRRERTALQCP*WRLPCRSHFIC
Trigger: ACAAATGAAATGGGATCTGCACGGAAGCCTCCAGCATGGGCACTGCAGTGCCGTCCTCTCTCTTCTAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS CCA 72 bp ATCCACCCATTGCTGTCTCCATTCCTATGGGTAAAGTaGAGTTGCCTGCCTTCTCAGTGCCAGGCTGACCAC +
Preference number: 6 (lower is better)
Translates to: IHPLLSPFLWVK*SCLPSQCQADH
Trigger: GTGGTCAGCCTGGCACTGAGAAGGCAGGCAACTCCACTTTACCCATAGGAATGGAGACAGCAATGGGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS CAA 72 bp AACCTTCTAAACTGGGGGAGCCTTGTTGCTAATAACTaGGCTCACACTGGCCAGGTCTCTCCTGGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: NLLNWGSLVANN*AHTGQVSPGPV
Trigger: CACTGGCCCAGGAGAGACCTGGCCAGTGTGAGCCAAGTTATTAGCAACAAGGCTCCCCCAGTTTAGAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS CAA 72 bp ACTGCAGCCAATATTTCCCCCAGAATCAGCAACCCTTaGACCCTTCCCTTTGTCAGAGCACTGGGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: TAANISPRISNP*TLPFVRALGLQ
Trigger: CTGGAGCCCCAGTGCTCTGACAAAGGGAAGGGTCAAAGGGTTGCTGATTCTGGGGGAAATATTGGCTGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CAA 90 bp CTCCTTTCATCTCTGCAGTGGGCTGTGTCCAAGCTGCTGAGGTCCTaGCACAGGTCAAATCTAAGTTCTCTTCCCTTTCAGCCCCCGCTT +
Preference number: 6 (lower is better)
Translates to: LLSSLQWAVSKLLRS*HRSNLSSLPFQPPL
Trigger: AAGCGGGGGCTGAAAGGGAAGAGAACTTAGATTTGACCTGTGCAAGGACCTCAGCAGCTTGGACACAGCCCACTGCAGAGATGAAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000326080.10
ENST00000423554.5
ENST00000517448.5
ENST00000519501.5
ENST00000520581.5
ENST00000521518.5
CDS TCA 72 bp TGTTTGGTTAGAAGGGATTTCTCCAAGTTCCCTCTGTaGGCTGGAGGGATTTCTGCCCCAAAGCGCGACAGG +
Preference number: 6 (lower is better)
Translates to: CLVRRDFSKFPL*AGGISAPKRDR
Trigger: CCTGTCGCGCTTTGGGGCAGAAATCCCTCCAGCTCACAGAGGGAACTTGGAGAAATCCCTTCTAACCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS TCA 72 bp TTCTTGACCAACTTGCTGGTTTTCACAGTGATGCTGTaGAGATGGGGGCCTGCCCAAGCATTTCCACCAGGG +
Preference number: 6 (lower is better)
Translates to: FLTNLLVFTVML*RWGPAQAFPPG
Trigger: CCCTGGTGGAAATGCTTGGGCAGGCCCCCATCTTCACAGCATCACTGTGAAAACCAGCAAGTTGGTCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS GCA 72 bp GCTATCAGAAGCTTAAGGAGGGAGGGTGATGGTTGTTaGCTAGGGACCCATTGTGGGGAGAAGGTCCTTACT +
Preference number: 6 (lower is better)
Translates to: AIRSLRREGDGC*LGTHCGEKVLT
Trigger: AGTAAGGACCTTCTCCCCACAATGGGTCCCTAGGCAACAACCATCACCCTCCCTCCTTAAGCTTCTGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS GCA 72 bp AATGCATCTCCCGGGGGCCACTCCAAACCTGCAATTTaGCGTATCTGGAGTCCTCCTTTGAAAAGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: NASPGGHSKPAI*RIWSPPLKSLL
Trigger: CAGCAAGCTTTTCAAAGGAGGACTCCAGATACGGCAAATTGCAGGTTTGGAGTGGCCCCCGGGAGATGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS GCA 72 bp TGCTACCAATGCATCTCCCGGGGGCCACTCCAAACCTaGAATTTGCCGTATCTGGAGTCCTCCTTTGAAAAG +
Preference number: 6 (lower is better)
Translates to: CYQCISRGPLQT*NLPYLESSFEK
Trigger: CTTTTCAAAGGAGGACTCCAGATACGGCAAATTGCAGGTTTGGAGTGGCCCCCGGGAGATGCATTGGTAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS CCA 72 bp TCAACCAACCAGGAAGGCACATCTGCGTTTTCCAGCTaGCCTTTTCCAGCTTCTGTGGGAGCCTCTTCCTTA +
Preference number: 6 (lower is better)
Translates to: STNQEGTSAFSS*PFPASVGASSL
Trigger: TAAGGAAGAGGCTCCCACAGAAGCTGGAAAAGGCCAGCTGGAAAACGCAGATGTGCCTTCCTGGTTGGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517874.1
ENST00000519501.5
CDS CCA 72 bp GCCCAAGCATTTCCACCAGGGTCCACTGTACAGAGCTaGTCCCAAGTGTCCAAAGTCCATTTGGCCTCAATA +
Preference number: 6 (lower is better)
Translates to: AQAFPPGSTVQS*SQVSKVHLASI
Trigger: TATTGAGGCCAAATGGACTTTGGACACTTGGGACCAGCTCTGTACAGTGGACCCTGGTGGAAATGCTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CCA 72 bp TTTCTCTGGCCAGGCCCCATGTATTTACAGGTAACTTaGGTAGCCTCCATGGTGCTTGGAGAAGGCTGTGAC +
Preference number: 6 (lower is better)
Translates to: FLWPGPMYLQVT*VASMVLGEGCD
Trigger: GTCACAGCCTTCTCCAAGCACCATGGAGGCTACCCAAGTTACCTGTAAATACATGGGGCCTGGCCAGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CAA 72 bp CAATGCATCTCCCGGGGGCCACTCCAAACCTGCAATTaGCCGTATCTGGAGTCCTCCTTTGAAAAGCTTGCT +
Preference number: 6 (lower is better)
Translates to: QCISRGPLQTCN*PYLESSFEKLA
Trigger: AGCAAGCTTTTCAAAGGAGGACTCCAGATACGGCAAATTGCAGGTTTGGAGTGGCCCCCGGGAGATGCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS CAA 72 bp CCTCTGCAGTGGGCTGTGTCCAAGCTGCTGAGGTCCTaGCACAGGTCAAATCTAAGTTCTCTTCCCTTTCAG +
Preference number: 6 (lower is better)
Translates to: PLQWAVSKLLRS*HRSNLSSLPFQ
Trigger: CTGAAAGGGAAGAGAACTTAGATTTGACCTGTGCAAGGACCTCAGCAGCTTGGACACAGCCCACTGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517938.5
ENST00000518651.5
CDS CAA 90 bp GCCAGGGAGGTCTTAGGGCTTGGGACCAAGGGGTTACCTGTAGTCTaGGGTAGGAACTTGGACAGGCCATTTAAGGAGTGTCTCCATTTT +
Preference number: 6 (lower is better)
Translates to: AREVLGLGTKGLPVV*GRNLDRPFKECLHF
Trigger: AAAATGGAGACACTCCTTAAATGGCCTGTCCAAGTTCCTACCCAAGACTACAGGTAACCCCTTGGTCCCAAGCCCTAAGACCTCCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519258.1
CDS CAA 90 bp CCAGGGTCCACTGTACAGAGCTGGTCCCAAGTGTCCAAAGTCCATTaGGCCTCAATACTGCAGCCAATATTTCCCCCAGAATCAGCAACC +
Preference number: 6 (lower is better)
Translates to: PGSTVQSWSQVSKVH*ASILQPIFPPESAT
Trigger: GGTTGCTGATTCTGGGGGAAATATTGGCTGCAGTATTGAGGCCAAATGGACTTTGGACACTTGGGACCAGCTCTGTACAGTGGACCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CAA 90 bp ATCAACAGTTCTCTGCAGTGGGCTGTGTCCAAGCTGCTGAGGTCCTaGCACAGGTCAAATCTAAGTTCTCTTCCCTTTCAGCCCCCGCTT +
Preference number: 6 (lower is better)
Translates to: INSSLQWAVSKLLRS*HRSNLSSLPFQPPL
Trigger: AAGCGGGGGCTGAAAGGGAAGAGAACTTAGATTTGACCTGTGCAAGGACCTCAGCAGCTTGGACACAGCCCACTGCAGAGAACTGTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520461.1
CDS CAA 90 bp CCTCTCTTTAACCTTCTAAACTGGGGGAGCCTTGTTGCTAATAACTaGGCTCACACTGGCCAGGTCTCTCCTGGGCCAGTGGTGAGAATT +
Preference number: 6 (lower is better)
Translates to: PLFNLLNWGSLVANN*AHTGQVSPGPVVRI
Trigger: AATTCTCACCACTGGCCCAGGAGAGACCTGGCCAGTGTGAGCCAAGTTATTAGCAACAAGGCTCCCCCAGTTTAGAAGGTTAAAGAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS TCA 72 bp GCTCCAGAAGAAGAGACAAGGCACTTGGATGGCACCTaGGATTGGGAAACAGAAACAGTCAGGGCGACTTTG +
Preference number: 6 (lower is better)
Translates to: APEEETRHLDGT*DWETETVRATL
Trigger: CAAAGTCGCCCTGACTGTTTCTGTTTCCCAATCTCAGGTGCCATCCAAGTGCCTTGTCTCTTCTTCTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519258.1
CDS CCA 72 bp ATCATGCACTGGTTGAAAAGAACTGTGCGGATAGACTaGCGCAGTTTCACAGGATCCACCTGCCCAAGGGAA +
Preference number: 6 (lower is better)
Translates to: IMHWLKRTVRID*RSFTGSTCPRE
Trigger: TTCCCTTGGGCAGGTGGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGTTCTTTTCAACCAGTGCATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CAA 72 bp TCTCTGCAGTGGGCTGTGTCCAAGCTGCTGAGGTCCTaGCACAGGTCAAATCTAAGTTCTCTTCCCTTTCAG +
Preference number: 6 (lower is better)
Translates to: SLQWAVSKLLRS*HRSNLSSLPFQ
Trigger: CTGAAAGGGAAGAGAACTTAGATTTGACCTGTGCAAGGACCTCAGCAGCTTGGACACAGCCCACTGCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326080.10
ENST00000423554.5
ENST00000517448.5
ENST00000519501.5
ENST00000520461.1
ENST00000520581.5
ENST00000521518.5
CDS GCA 72 bp GGTCCCAAGTGTCCAAAGTCCATTTGGCCTCAATACTaGAGCCAATATTTCCCCCAGAATCAGCAACCCTTT +
Preference number: 6 (lower is better)
Translates to: GPKCPKSIWPQY*SQYFPQNQQPF
Trigger: AAAGGGTTGCTGATTCTGGGGGAAATATTGGCTGCAGTATTGAGGCCAAATGGACTTTGGACACTTGGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CCA 72 bp ATCATGCACTGGTTGAAAAGAACTGTGCGGATAGACTaGCGCAGTTTCACAGGATCCACCATGTCACTGAGT +
Preference number: 6 (lower is better)
Translates to: IMHWLKRTVRID*RSFTGSTMSLS
Trigger: ACTCAGTGACATGGTGGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGTTCTTTTCAACCAGTGCATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521518.5
CDS CCA 72 bp CTGTACAGAGCTGGTCCCAAGTGTCCAAAGTCCATTTaGCCTCAATACTGCAGCCAATATTTCCCCCAGAAT +
Preference number: 6 (lower is better)
Translates to: LYRAGPKCPKSI*PQYCSQYFPQN
Trigger: ATTCTGGGGGAAATATTGGCTGCAGTATTGAGGCCAAATGGACTTTGGACACTTGGGACCAGCTCTGTACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CAA 72 bp GGGACCAAGGGGTTACCTGTAGTCTTGGGTAGGAACTaGGACAGGCCATTTAAGGAGTGTCTCCATTTTCTT +
Preference number: 6 (lower is better)
Translates to: GTKGLPVVLGRN*DRPFKECLHFL
Trigger: AAGAAAATGGAGACACTCCTTAAATGGCCTGTCCAAGTTCCTACCCAAGACTACAGGTAACCCCTTGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519258.1
CDS CAA 90 bp CTCTCTCATAACAACAGCTGTTACCCATATTCTAGCATCCACCCATaGCTGTCTCCATTCCTATGGGTAAAGTGGAGTTGCCTGCCTTCT +
Preference number: 6 (lower is better)
Translates to: LSHNNSCYPYSSIHP*LSPFLWVKWSCLPS
Trigger: AGAAGGCAGGCAACTCCACTTTACCCATAGGAATGGAGACAGCAATGGGTGGATGCTAGAATATGGGTAACAGCTGTTGTTATGAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS CAA 90 bp TTAGGGCTTGGGACCAAGGGGTTACCTGTAGTCTTGGGTAGGAACTaGGACAGGCCATTTAAGGAGTGTCTCCATTTTCTTAGCCATAAA +
Preference number: 6 (lower is better)
Translates to: LGLGTKGLPVVLGRN*DRPFKECLHFLSHK
Trigger: TTTATGGCTAAGAAAATGGAGACACTCCTTAAATGGCCTGTCCAAGTTCCTACCCAAGACTACAGGTAACCCCTTGGTCCCAAGCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519258.1
CDS CAA 90 bp ATGAAGTTAGGTTTTCCTGTTGTGTCAACCACCAATAGAAGCCCATaGAAGCTCCAGAAGAAGAGACAAGGCACTTGGATGGCACCTGAG +
Preference number: 6 (lower is better)
Translates to: MKLGFPVVSTTNRSP*KLQKKRQGTWMAPE
Trigger: CTCAGGTGCCATCCAAGTGCCTTGTCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGGTGGTTGACACAACAGGAAAACCTAACTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519258.1
CDS CAA 90 bp ATGAAGTTAGGTTTTCCTGTTGTGTCAACCACCAATAGAAGCCCATaGAAGCTCCAGAAGAAGAGACAAGGCACTTGGATGGCACCTGCT +
Preference number: 6 (lower is better)
Translates to: MKLGFPVVSTTNRSP*KLQKKRQGTWMAPA
Trigger: AGCAGGTGCCATCCAAGTGCCTTGTCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGGTGGTTGACACAACAGGAAAACCTAACTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520581.5
CDS TCA 72 bp GTTTTCCTGTTGTGTCAACCACCAATAGAAGCCCATTaGAGCTCCAGAAGAAGAGACAAGGCACTTGGATGG +
Preference number: 6 (lower is better)
Translates to: VFLLCQPPIEAH*SSRRRDKALGW
Trigger: CCATCCAAGTGCCTTGTCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGGTGGTTGACACAACAGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000326080.10
ENST00000423554.5
ENST00000517448.5
ENST00000517938.5
ENST00000518651.5
ENST00000519258.1
ENST00000519501.5
ENST00000520581.5
ENST00000522825.1
ENST00000523997.5
CDS GCA 72 bp CTGGAACACTTAACTAAAATGCAGGTTTCCAGGCCCTaGTCCCCCAGATACCTTAGTTCAGCATATTTGGAG +
Preference number: 6 (lower is better)
Translates to: LEHLTKMQVSRP*SPRYLSSAYLE
Trigger: CTCCAAATATGCTGAACTAAGGTATCTGGGGGAGCAGGGCCTGGAAACCTGCATTTTAGTTAAGTGTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS CAA 72 bp GGTTTTCCTGTTGTGTCAACCACCAATAGAAGCCCATaGAAGCTCCAGAAGAAGAGACAAGGCACTTGGATG +
Preference number: 6 (lower is better)
Translates to: GFPVVSTTNRSP*KLQKKRQGTWM
Trigger: CATCCAAGTGCCTTGTCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGGTGGTTGACACAACAGGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000326080.10
ENST00000423554.5
ENST00000517448.5
ENST00000517938.5
ENST00000518651.5
ENST00000519258.1
ENST00000519501.5
ENST00000520581.5
ENST00000522825.1
ENST00000523997.5
CDS CAA 90 bp CAGGTTTCCAGGCCCTGCTCCCCCAGATACCTTAGTTCAGCATATTaGGAGTGGAATTCAAGAGCCTATATTTTAAACAAGCATCTCAGG +
Preference number: 6 (lower is better)
Translates to: QVSRPCSPRYLSSAY*EWNSRAYILNKHLR
Trigger: CCTGAGATGCTTGTTTAAAATATAGGCTCTTGAATTCCACTCCAAATATGCTGAACTAAGGTATCTGGGGGAGCAGGGCCTGGAAACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS CAA 90 bp GTGATACCCCATTTCAGCCATTTAGCCCCTCTTCATCAGAGAACCTaGTTCATGATTGGATGCAGAGATCAAGATCATCTGCCTCCTCAA +
Preference number: 6 (lower is better)
Translates to: VIPHFSHLAPLHQRT*FMIGCRDQDHLPPQ
Trigger: TTGAGGAGGCAGATGATCTTGATCTCTGCATCCAATCATGAACAAGGTTCTCTGATGAAGAGGGGCTAAATGGCTGAAATGGGGTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CAA 90 bp ATGAAGTTAGGTTTTCCTGTTGTGTCAACCACCAATAGAAGCCCATaGAAGCTCCAGAAGAAGAGACAAGGCACTTGGATGGCACCATGT +
Preference number: 6 (lower is better)
Translates to: MKLGFPVVSTTNRSP*KLQKKRQGTWMAPC
Trigger: ACATGGTGCCATCCAAGTGCCTTGTCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGGTGGTTGACACAACAGGAAAACCTAACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522825.1
CDS TCA 72 bp CTGAGAATCTCTAGCAGAACTAGGCTTCTTCAGGTATaGGATCACCAGCATCAGAATCCCCTGGAACACTTA +
Preference number: 6 (lower is better)
Translates to: LRISSRTRLLQV*DHQHQNPLEHL
Trigger: TAAGTGTTCCAGGGGATTCTGATGCTGGTGATCTCATACCTGAAGAAGCCTAGTTCTGCTAGAGATTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS CCA 72 bp CCTGAGATTGGGAAACAGAAACAGTCAGGGCGACTTTaGGTTCTCACAGCACATAGACTAACAGAACATACT +
Preference number: 6 (lower is better)
Translates to: PEIGKQKQSGRL*VLTAHRLTEHT
Trigger: AGTATGTTCTGTTAGTCTATGTGCTGTGAGAACCCAAAGTCGCCCTGACTGTTTCTGTTTCCCAATCTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519258.1
CDS CCA 72 bp ATCATGCACTGGTTGAAAAGAACTGTGCGGATAGACTaGCGCAGTTTCACAGGATCCACCTATAAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: IMHWLKRTVRID*RSFTGSTYKEE
Trigger: CTCTTCTTTATAGGTGGATCCTGTGAAACTGCGCCAGTCTATCCGCACAGTTCTTTTCAACCAGTGCATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524363.5
CDS CAA 72 bp AACAACAGCTGTTACCCATATTCTAGCATCCACCCATaGCTGTCTCCATTCCTATGGGTAAAGTGGAGTTGC +
Preference number: 6 (lower is better)
Translates to: NNSCYPYSSIHP*LSPFLWVKWSC
Trigger: GCAACTCCACTTTACCCATAGGAATGGAGACAGCAATGGGTGGATGCTAGAATATGGGTAACAGCTGTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS CAA 90 bp ATGAAGTTAGGTTTTCCTGTTGTGTCAACCACCAATAGAAGCCCATaGAAGCTCCAGAAGAAGAGACAAGGCACTTGGATGGCACCTATA +
Preference number: 6 (lower is better)
Translates to: MKLGFPVVSTTNRSP*KLQKKRQGTWMAPI
Trigger: TATAGGTGCCATCCAAGTGCCTTGTCTCTTCTTCTGGAGCTTCAATGGGCTTCTATTGGTGGTTGACACAACAGGAAAACCTAACTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326080.10
ENST00000423554.5
ENST00000517448.5
ENST00000517938.5
ENST00000518651.5
ENST00000519501.5
ENST00000523997.5
CDS CCA 72 bp GTGGGCAAATTATTTCCTCTCTTTAACCTTCTAAACTaGGGGAGCCTTGTTGCTAATAACTTGGCTCACACT +
Preference number: 6 (lower is better)
Translates to: VGKLFPLFNLLN*GSLVANNLAHT
Trigger: AGTGTGAGCCAAGTTATTAGCAACAAGGCTCCCCCAGTTTAGAAGGTTAAAGAGAGGAAATAATTTGCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS CCA 72 bp CACACATTCAGAATCCATACTATCCGTCTATTACAGTaGAGTTATCCATTGTTTTCGCAGCTGTCTCCCTCT +
Preference number: 6 (lower is better)
Translates to: HTFRIHTIRLLQ*SYPLFSQLSPS
Trigger: AGAGGGAGACAGCTGCGAAAACAATGGATAACTCCACTGTAATAGACGGATAGTATGGATTCTGAATGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517448.5
CDS CCA 72 bp ACCATAGATTACTTCCTGGATCCTGATGAACTTGTTTaGTTAGAAGGGATTTCTCCAAGTTCCCTCTGTGAG +
Preference number: 6 (lower is better)
Translates to: TIDYFLDPDELV*LEGISPSSLCE
Trigger: CTCACAGAGGGAACTTGGAGAAATCCCTTCTAACCAAACAAGTTCATCAGGATCCAGGAAGTAATCTATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS CAA 72 bp AGGCCCTGCTCCCCCAGATACCTTAGTTCAGCATATTaGGAGTGGAATTCAAGAGCCTATATTTTAAACAAG +
Preference number: 6 (lower is better)
Translates to: RPCSPRYLSSAY*EWNSRAYILNK
Trigger: CTTGTTTAAAATATAGGCTCTTGAATTCCACTCCAAATATGCTGAACTAAGGTATCTGGGGGAGCAGGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS CAA 72 bp CATTTCAGCCATTTAGCCCCTCTTCATCAGAGAACCTaGTTCATGATTGGATGCAGAGATCAAGATCATCTG +
Preference number: 6 (lower is better)
Translates to: HFSHLAPLHQRT*FMIGCRDQDHL
Trigger: CAGATGATCTTGATCTCTGCATCCAATCATGAACAAGGTTCTCTGATGAAGAGGGGCTAAATGGCTGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524250.5
CDS TCA 72 bp AAAGTCTGGGGCTTTCAGAGATACATGACTTCCTTGTaGTTGCCTGCAGGAGTTTTATGCATATATGTACTT +
Preference number: 6 (lower is better)
Translates to: KVWGFQRYMTSL*LPAGVLCIYVL
Trigger: AAGTACATATATGCATAAAACTCCTGCAGGCAATCACAAGGAAGTCATGTATCTCTGAAAGCCCCAGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS CCA 72 bp TGCTCCCCCAGATACCTTAGTTCAGCATATTTGGAGTaGAATTCAAGAGCCTATATTTTAAACAAGCATCTC +
Preference number: 6 (lower is better)
Translates to: CSPRYLSSAYLE*NSRAYILNKHL
Trigger: GAGATGCTTGTTTAAAATATAGGCTCTTGAATTCCACTCCAAATATGCTGAACTAAGGTATCTGGGGGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5
CDS GCA 72 bp GGGCTTTCAGAGATACATGACTTCCTTGTGATTGCCTaGAGGAGTTTTATGCATATATGTACTTTTCTAAAG +
Preference number: 6 (lower is better)
Translates to: GLSEIHDFLVIA*RSFMHICTFLK
Trigger: CTTTAGAAAAGTACATATATGCATAAAACTCCTGCAGGCAATCACAAGGAAGTCATGTATCTCTGAAAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423554.5
ENST00000524250.5