RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAXC (Homo sapiens)

Ensembl gene IDs: ENSG00000146267

Ensembl transcript IDs: ENST00000389677.6, ENST00000461803.1, ENST00000480148.1, ENST00000538471.1

Found 412 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTaGGAAAATGGACCGACCCAGGGAGTGGCAGGTCCCAAGGAAGAG +
Preference number: 1 (lower is better)
Translates to: LPSTKISSQLGWIAT*ENGPTQGVAGPKEE
Trigger: CTCTTCCTTGGGACCTGCCACTCCCTGGGTCGGTCCATTTTCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR CCA 90 bp TCCCACCTTCAGCCCAGGCTGGTTGCCCTATCCATGCAGAAGCGGTaGGTTTCAGGGCTGAAAGGAAGCGCACTTGGCCCTGAACTCATT +
Preference number: 1 (lower is better)
Translates to: SHLQPRLVALSMQKR*VSGLKGSALGPELI
Trigger: AATGAGTTCAGGGCCAAGTGCGCTTCCTTTCAGCCCTGAAACCCACCGCTTCTGCATGGATAGGGCAACCAGCCTGGGCTGAAGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 90 bp GAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTaGTACCTGGGAAAATGGACCGACCCAGGGAGTGGCAGGTCCCAA +
Preference number: 1 (lower is better)
Translates to: ENSAKHEDLLPARMD*YLGKWTDPGSGRSQ
Trigger: TTGGGACCTGCCACTCCCTGGGTCGGTCCATTTTCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR CCA 90 bp CATGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATaGATTGCTACCTGGGAAAATGGACCGACCCAGGGAGTGGCAGGT +
Preference number: 1 (lower is better)
Translates to: HVKTLPSTKISSQLG*IATWENGPTQGVAG
Trigger: ACCTGCCACTCCCTGGGTCGGTCCATTTTCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR TCA 90 bp GGAGTAGACTGCAGTCTGATTCAAGTCCAAGTTGTTCCAGGTCCGTaGTTAGTCTCCTGGGTAGCCCACAGCCTTGGTAGTGTCACTTTC +
Preference number: 1 (lower is better)
Translates to: GVDCSLIQVQVVPGP*LVSWVAHSLGSVTF
Trigger: GAAAGTGACACTACCAAGGCTGTGGGCTACCCAGGAGACTAATCACGGACCTGGAACAACTTGGACTTGAATCAGACTGCAGTCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 90 bp CTGACAGGACATGGACAAAAGCGAAGTAGGATTCCAACCAGGGAATaGCTGGAGATGTGCTGGTTGTCTGAACACAGGGTGACTTCTCAG +
Preference number: 1 (lower is better)
Translates to: LTGHGQKRSRIPTRE*LEMCWLSEHRVTSQ
Trigger: CTGAGAAGTCACCCTGTGTTCAGACAACCAGCACATCTCCAGCCATTCCCTGGTTGGAATCCTACTTCGCTTTTGTCCATGTCCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 90 bp AGCCTTCATGTGAAGCTGACGAAGTCAGACCTTGAGAGATGGGCATaGCTTGGGCCAGTGGAGCAGAGAATAGAACATTTCAGGAGAAGG +
Preference number: 1 (lower is better)
Translates to: SLHVKLTKSDLERWA*LGPVEQRIEHFRRR
Trigger: CCTTCTCCTGAAATGTTCTATTCTCTGCTCCACTGGCCCAAGTCATGCCCATCTCTCAAGGTCTGACTTCGTCAGCTTCACATGAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 90 bp CAGGTAAGTGTTTCCAGGTGGTGTCCGCCCATTAGCCCCGAAATGTaGGTTCAAATTATGCCAACATTGGCCCTTCCTATCTCAGATACC +
Preference number: 1 (lower is better)
Translates to: QVSVSRWCPPISPEM*VQIMPTLALPISDT
Trigger: GGTATCTGAGATAGGAAGGGCCAATGTTGGCATAATTTGAACCCACATTTCGGGGCTAATGGGCGGACACCACCTGGAAACACTTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 90 bp GGACAAAAGCGAAGTAGGATTCCAACCAGGGAATGGCTGGAGATGTaGTGGTTGTCTGAACACAGGGTGACTTCTCAGGTAACATGCATT +
Preference number: 1 (lower is better)
Translates to: GQKRSRIPTREWLEM*WLSEHRVTSQVTCI
Trigger: AATGCATGTTACCTGAGAAGTCACCCTGTGTTCAGACAACCAGCACATCTCCAGCCATTCCCTGGTTGGAATCCTACTTCGCTTTTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 90 bp ATCATTGTGATTGCAAAACAGAGGGTGCAGGTAAGTGTTTCCAGGTaGTGTCCGCCCATTAGCCCCGAAATGTGGGTTCAAATTATGCCA +
Preference number: 1 (lower is better)
Translates to: IIVIAKQRVQVSVSR*CPPISPEMWVQIMP
Trigger: TGGCATAATTTGAACCCACATTTCGGGGCTAATGGGCGGACACCACCTGGAAACACTTACCTGCACCCTCTGTTTTGCAATCACAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 90 bp CTAAGTGTACCTTTGTGTGTATTTCATCTGCTCAGCTTTTGCAGGTaGCTGTGGTGGTGGTTGCCTGGATATGGAATTCCTTTGCCCTCA +
Preference number: 1 (lower is better)
Translates to: LSVPLCVFHLLSFCR*LWWWLPGYGIPLPS
Trigger: TGAGGGCAAAGGAATTCCATATCCAGGCAACCACCACCACAGTCACCTGCAAAAGCTGAGCAGATGAAATACACACAAAGGTACACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 90 bp AAAACACACTTGCTAGAGAGAGGGGAGGCAAACAGTCCTCCCAAATaGTGCTGCAGCCTCAAACAGGCTTATCCATTCATATCTTCTCCA +
Preference number: 1 (lower is better)
Translates to: KTHLLERGEANSPPK*CCSLKQAYPFISSP
Trigger: TGGAGAAGATATGAATGGATAAGCCTGTTTGAGGCTGCAGCATCATTTGGGAGGACTGTTTGCCTCCCCTCTCTCTAGCAAGTGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 90 bp GTGTATTTCATCTGCTCAGCTTTTGCAGGTGACTGTGGTGGTGGTTaGCTGGATATGGAATTCCTTTGCCCTCAAATCTTCACATGCATG +
Preference number: 1 (lower is better)
Translates to: VYFICSAFAGDCGGG*LDMEFLCPQIFTCM
Trigger: CATGCATGTGAAGATTTGAGGGCAAAGGAATTCCATATCCAGGCAACCACCACCACAGTCACCTGCAAAAGCTGAGCAGATGAAATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 90 bp CCAGGTGGTGTCCGCCCATTAGCCCCGAAATGTGGGTTCAAATTATaGCAACATTGGCCCTTCCTATCTCAGATACCTAAAAATAAGTCT +
Preference number: 1 (lower is better)
Translates to: PGGVRPLAPKCGFKL*QHWPFLSQIPKNKS
Trigger: AGACTTATTTTTAGGTATCTGAGATAGGAAGGGCCAATGTTGGCATAATTTGAACCCACATTTCGGGGCTAATGGGCGGACACCACCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 90 bp CAAAAGCGAAGTAGGATTCCAACCAGGGAATGGCTGGAGATGTGCTaGTTGTCTGAACACAGGGTGACTTCTCAGGTAACATGCATTTTA +
Preference number: 1 (lower is better)
Translates to: QKRSRIPTREWLEMC*LSEHRVTSQVTCIL
Trigger: TAAAATGCATGTTACCTGAGAAGTCACCCTGTGTTCAGACAACCAGCACATCTCCAGCCATTCCCTGGTTGGAATCCTACTTCGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 90 bp CAAAAATATACCCTAACACCACAGTATACATGGGCAGGGCTCACTTaGGGAGTAGACTGCAGTCTGATTCAAGTCCAAGTTGTTCCAGGT +
Preference number: 1 (lower is better)
Translates to: QKYTLTPQYTWAGLT*GVDCSLIQVQVVPG
Trigger: ACCTGGAACAACTTGGACTTGAATCAGACTGCAGTCTACTCCTCAAGTGAGCCCTGCCCATGTATACTGTGGTGTTAGGGTATATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 90 bp GCTGTCAGGCAATTGCCCAAGACTCCAGATAGCAATGTCCATTCATaGCCCTGTAAGAGGTACCTGGATGGAATGACTTATTTTACAACT +
Preference number: 1 (lower is better)
Translates to: AVRQLPKTPDSNVHS*PCKRYLDGMTYFTT
Trigger: AGTTGTAAAATAAGTCATTCCATCCAGGTACCTCTTACAGGGGCATGAATGGACATTGCTATCTGGAGTCTTGGGCAATTGCCTGACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 90 bp GATTTGGGAATCCATCTTGCTATTCTTCAGAGTCTAGCAATACCCTaGACTGATGAGAGGTCTCTTGTATTGGTCTTGACCAGGCTGACA +
Preference number: 1 (lower is better)
Translates to: DLGIHLAILQSLAIP*TDERSLVLVLTRLT
Trigger: TGTCAGCCTGGTCAAGACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAATAGCAAGATGGATTCCCAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 90 bp AGGGTATCTCAGCACGTATTCCCAGTTACATATGCCCTACACAATTaGTTAAGTGGTAAGCAGTCTGAAAAACTCTCCTCCCTTTACCTC +
Preference number: 1 (lower is better)
Translates to: RVSQHVFPVTYALHN*LSGKQSEKLSSLYL
Trigger: GAGGTAAAGGGAGGAGAGTTTTTCAGACTGCTTACCACTTAAGCAATTGTGTAGGGCATATGTAACTGGGAATACGTGCTGAGATACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 90 bp AAATGTGGTGGGAAAAGGACAACCCATGCTTTGTGGAGACAGGTCTaGAGTCCACCTGTTCATTATATTCATATTTTCAGTCCAGGAGTC +
Preference number: 1 (lower is better)
Translates to: KCGGKRTTHALWRQV*SPPVHYIHIFSPGV
Trigger: GACTCCTGGACTGAAAATATGAATATAATGAACAGGTGGACTGCAGACCTGTCTCCACAAAGCATGGGTTGTCCTTTTCCCACCACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 90 bp AACACCTACAAAATGTTGATGCCCAGTTATATGCTGTCAGGCAATTaGCCAAGACTCCAGATAGCAATGTCCATTCATGCCCCTGTAAGA +
Preference number: 1 (lower is better)
Translates to: NTYKMLMPSYMLSGN*PRLQIAMSIHAPVR
Trigger: TCTTACAGGGGCATGAATGGACATTGCTATCTGGAGTCTTGGGCAATTGCCTGACAGCATATAACTGGGCATCAACATTTTGTAGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 90 bp CCACCAAATGAGGGACTCAGACCCTCAGTTTTCCAAACTTCACCATaGAAAAACCATCGCTGTCATCAACATTTGAGTTGTCAGACATTT +
Preference number: 1 (lower is better)
Translates to: PPNEGLRPSVFQTSP*KNHRCHQHLSCQTF
Trigger: AAATGTCTGACAACTCAAATGTTGATGACAGCGATGGTTTTTCCATGGTGAAGTTTGGAAAACTGAGGGTCTGAGTCCCTCATTTGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 90 bp ACGTGGTGTAATGGAAAGAACCATATTGACCTCAGTTTTTGGTCCTaGCCTTCAAATAAGTATGTATGTGACACTGAGCCAATAAGGTGC +
Preference number: 1 (lower is better)
Translates to: TWCNGKNHIDLSFWS*PSNKYVCDTEPIRC
Trigger: GCACCTTATTGGCTCAGTGTCACATACATACTTATTTGAAGGGCAGGACCAAAAACTGAGGTCAATATGGTTCTTTCCATTACACCACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 90 bp AGGGCAACGTGGTGTAATGGAAAGAACCATATTGACCTCAGTTTTTaGTCCTGCCCTTCAAATAAGTATGTATGTGACACTGAGCCAATA +
Preference number: 1 (lower is better)
Translates to: RATWCNGKNHIDLSF*SCPSNKYVCDTEPI
Trigger: TATTGGCTCAGTGTCACATACATACTTATTTGAAGGGCAGGACCAAAAACTGAGGTCAATATGGTTCTTTCCATTACACCACGTTGCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 90 bp ATTAAATCCTTCCGGATAAAGACTCACACTATGGTGACTTTGTCTTaGTTATTTTGTTTGCATAACCCGCCTTGGGAAAGTAAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: IKSFRIKTHTMVTLS*LFCLHNPPWESKAG
Trigger: CCCTGCTTTACTTTCCCAAGGCGGGTTATGCAAACAAAATAACCAAGACAAAGTCACCATAGTGTGAGTCTTTATCCGGAAGGATTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 90 bp AGCTCAATGATTCTGCTCATTAATCTTGTTGAGTGGGGGTACAGATaGGCAAAGAGAGGTGGATGCAAGAGCTTGATTTACTTTTACAAT +
Preference number: 1 (lower is better)
Translates to: SSMILLINLVEWGYR*AKRGGCKSLIYFYN
Trigger: ATTGTAAAAGTAAATCAAGCTCTTGCATCCACCTCTCTTTGCCCATCTGTACCCCCACTCAACAAGATTAATGAGCAGAATCATTGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 90 bp CAACAAGGGAATCCTTTTGAACTTCCCAAGTTATATCCAGACCACTaGAAGCAACTGAATAAAGGTCAAGCACTTCACAATCACATGCAA +
Preference number: 1 (lower is better)
Translates to: QQGNPFELPKLYPDH*KQLNKGQALHNHMQ
Trigger: TTGCATGTGATTGTGAAGTGCTTGACCTTTATTCAGTTGCTTCCAGTGGTCTGGATATAACTTGGGAAGTTCAAAAGGATTCCCTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 90 bp GTTGCCTGGATATGGAATTCCTTTGCCCTCAAATCTTCACATGCATaGAGTGCAATAAAGAATAAAATGCTGTGTTTATGTCGCACCACT +
Preference number: 1 (lower is better)
Translates to: VAWIWNSFALKSSHA*SAIKNKMLCLCRTT
Trigger: AGTGGTGCGACATAAACACAGCATTTTATTCTTTATTGCACTTCATGCATGTGAAGATTTGAGGGCAAAGGAATTCCATATCCAGGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 90 bp CATGGGTTCTTTAAAAGATACATAAGGAAGTATGAGGAGTCTTGGTaGTTTGGGAATCCATCTTGCTATTCTTCAGAGTCTAGCAATACC +
Preference number: 1 (lower is better)
Translates to: HGFFKRYIRKYEESW*FGNPSCYSSESSNT
Trigger: GGTATTGCTAGACTCTGAAGAATAGCAAGATGGATTCCCAAATCACCAAGACTCCTCATACTTCCTTATGTATCTTTTAAAGAACCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 90 bp ATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCAGCTaGCAACCAGCTCTTACACCTGCTCTACCACACAATATTATTAAT +
Preference number: 1 (lower is better)
Translates to: IKTSGLKRIIIKTIS*QPALTPALPHNIIN
Trigger: ATTAATAATATTGTGTGGTAGAGCAGGTGTAAGAGCTGGTTGTCAGCTGATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR TCA 90 bp TATTATTTTAGCAAGATGGCACCACCTAGAAAACTTTCAATTGCCTaGTACATCTCTACCACAGCCATACCACATGGTTGCTTGAAATTT +
Preference number: 1 (lower is better)
Translates to: YYFSKMAPPRKLSIA*YISTTAIPHGCLKF
Trigger: AAATTTCAAGCAACCATGTGGTATGGCTGTGGTAGAGATGTATCAGGCAATTGAAAGTTTTCTAGGTGGTGCCATCTTGCTAAAATAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 90 bp TTTGAATTTCCAAAATCTTGCTGTGAATCTCTGACCCTAAAGACTTaGGCATATCATGGCCATATTACCATATGCCAGTTTATCATCCCA +
Preference number: 1 (lower is better)
Translates to: FEFPKSCCESLTLKT*AYHGHITICQFIIP
Trigger: TGGGATGATAAACTGGCATATGGTAATATGGCCATGATATGCTCAAGTCTTTAGGGTCAGAGATTCACAGCAAGATTTTGGAAATTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 90 bp GTAAAACATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTaGAGGAAGGAGGTTCAAGAATCCATCTCACAATTAAGACCTCAG +
Preference number: 1 (lower is better)
Translates to: VKHFSDDISHYFKSW*RKEVQESISQLRPQ
Trigger: CTGAGGTCTTAATTGTGAGATGGATTCTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAATGTTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR TCA 90 bp AACCTAAGAGCACTTCTTTCTTCTTTTCTGTCACTCAAGACATACTaGACATGGATAATAGAGATTACTTTTGCTTGCATAGCCTGTACT +
Preference number: 1 (lower is better)
Translates to: NLRALLSSFLSLKTY*TWIIEITFACIACT
Trigger: AGTACAGGCTATGCAAGCAAAAGTAATCTCTATTATCCATGTTCAGTATGTCTTGAGTGACAGAAAAGAAGAAAGAAGTGCTCTTAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGTCCTCCCAGCTCGGATaGATTGCTACCTGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQSSQLG*IATWEN
Trigger: ATTTTCCCAGGTAGCAATCCATCCGAGCTGGGAGGA...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGACAACCCATGCTTTGTaGAGACAGGTCTGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQTTHAL*RQVCSP
Trigger: TGGACTGCAGACCTGTCTCCACAAAGCATGGGTTGT...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGGGCAACGTAACACTCTaGAGTCAACACAGAACATGC +
Preference number: 2 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQGNVTL*SQHRTC
Trigger: GCATGTTCTGTGTTGACTCCAGAGTGTTACGTTGCC...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGTGCTACCTGGGAAAATaGACCGACCCAGGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: NLSILVCHGPANSRSFRGCYLGK*TDPGSG
Trigger: GCCACTCCCTGGGTCGGTCCATTTTCCCAGGTAGCA...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTTTGCATAACCCGCCTTaGGAAAGTAAAGCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: DEENMPQMFASTPDSSKSLHNPP*ESKAGA
Trigger: TGCCCCTGCTTTACTTTCCCAAGGCGGGTTATGCAA...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 90 bp CTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATaGGTCTTGACCAGGCTGACAGGACATGGACAAAAGCGAAGTAGG +
Preference number: 2 (lower is better)
Translates to: LQSLAIPCTDERSLV*VLTRLTGHGQKRSR
Trigger: CCTACTTCGCTTTTGTCCATGTCCTGTCAGCCTGGTCAAGACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR TCA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCGTTGTTCCAGGTCCGTaGTTAGTCTCCTGGGTAGCC +
Preference number: 2 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVVVPGP*LVSWVA
Trigger: GGCTACCCAGGAGACTAATCACGGACCTGGAACAAC...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR GCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTAGCAATGTCCATTCATaGCCCTGTAAGAGGTACCTG +
Preference number: 2 (lower is better)
Translates to: DEENMPQMFASTPDSSKSSNVHS*PCKRYL
Trigger: CAGGTACCTCTTACAGGGGCATGAATGGACATTGCT...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR GCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTATGCTGTCAGGCAATTaGCCAAGACTCCAGATAGCA +
Preference number: 2 (lower is better)
Translates to: DEENMPQMFASTPDSSKSMLSGN*PRLQIA
Trigger: TGCTATCTGGAGTCTTGGGCAATTGCCTGACAGCAT...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 90 bp AGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCTaGACCAGGCTGACAGGACATGGACAAAAGCGAAGTAGGATTCCA +
Preference number: 2 (lower is better)
Translates to: SLAIPCTDERSLVLV*TRLTGHGQKRSRIP
Trigger: TGGAATCCTACTTCGCTTTTGTCCATGTCCTGTCAGCCTGGTCAAGACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR GCA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGCTATGCTGTTCTATTTaGCACTCTACAACCAGTGTA +
Preference number: 2 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQLCCSI*HSTTSV
Trigger: TACACTGGTTGTAGAGTGGCAAATAGAACAGCATAG...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR TCA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCTCACTGGGCAGTGGCTaGAAACACCAGAAAAGTTGC +
Preference number: 2 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVSLGSG*KHQKSC
Trigger: GCAACTTTTCTGGTGTTTTCAGCCACTGCCCAGTGA...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR TCA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCAACAGTCCTCCCAAATaGTGCTGCAGCCTCAAACAG +
Preference number: 2 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVNSPPK*CCSLKQ
Trigger: CTGTTTGAGGCTGCAGCATCATTTGGGAGGACTGTT...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAACTAAGGTCCCAGGCCTaGCTTCAGAAGGGGAATGGG +
Preference number: 2 (lower is better)
Translates to: REMESKKMKTKLQVEHPKLRSQA*LQKGNG
Trigger: CCCATTCCCCTTCTGAAGCCAGGCCTGGGACCTTAG...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 90 bp ACAAAAATATACCCTAACACCACAGTATACATGGGCAGGGCTCACTaGAGGAGTAGACTGCAGTCTGATTCAAGTCCAAGTTGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: TKIYPNTTVYMGRAH*RSRLQSDSSPSCSR
Trigger: CCTGGAACAACTTGGACTTGAATCAGACTGCAGTCTACTCCTCAAGTGAGCCCTGCCCATGTATACTGTGGTGTTAGGGTATATTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 90 bp TGGAAGCAACTGAATAAAGGTCAAGCACTTCACAATCACATGCAATaGATCCCTGGACCTGTTAAAGATGGGTTCCCAGAGCCCAGCATT +
Preference number: 2 (lower is better)
Translates to: WKQLNKGQALHNHMQ*IPGPVKDGFPEPSI
Trigger: AATGCTGGGCTCTGGGAACCCATCTTTAACAGGTCCAGGGATCAATTGCATGTGATTGTGAAGTGCTTGACCTTTATTCAGTTGCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR TCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTATAAAAACTATCAGCTaGCAACCAGCTCTTACACCT +
Preference number: 2 (lower is better)
Translates to: DEENMPQMFASTPDSSKSIKTIS*QPALTP
Trigger: AGGTGTAAGAGCTGGTTGTCAGCTGATAGTTTTTAT...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR TCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTTACAGAAAGGAATCATaGCAAAGTCCTAAGTGTACC +
Preference number: 2 (lower is better)
Translates to: DEENMPQMFASTPDSSKSYRKES*QSPKCT
Trigger: GGTACACTTAGGACTTTGTCATGATTCCTTTCTGTA...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR TCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGCAGAACATGCCAGGGTaGGTTCAGGCAATGAAAGAA +
Preference number: 2 (lower is better)
Translates to: NLSILVCHGPANSRSFRGQNMPG*VQAMKE
Trigger: TTCTTTCATTGCCTGAACTCACCCTGGCATGTTCTG...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR GCA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCGAAAAGGACAACCCATaGTTTGTGGAGACAGGTCTG +
Preference number: 2 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVEKDNP*FVETGL
Trigger: CAGACCTGTCTCCACAAAGCATGGGTTGTCCTTTTC...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATTCCTCCCAGCTCGGATaGATTGCTACCTGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: NKAAIVQLACENSAKHEDSSQLG*IATWEN
Trigger: ATTTTCCCAGGTAGCAATCCATCCGAGCTGGGAGGA...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR-3UTR CCA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGAAAGACATTACAAGTTaGCAGGCTTCTGCTTATAAA +
Preference number: 2 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQKDITS*QASAYK
Trigger: TTTATAAGCAGAAGCCTGCCAACTTGTAATGTCTTT...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAAACCTTCAGCCCAGGCTaGTTGCCCTATCCATGCAGA +
Preference number: 2 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKTFSPG*LPYPCR
Trigger: TCTGCATGGATAGGGCAACCAGCCTGGGCTGAAGGT...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 90 bp CAAAGTCCTAAGTGTACCTTTGTGTGTATTTCATCTGCTCAGCTTTaGCAGGTGACTGTGGTGGTGGTTGCCTGGATATGGAATTCCTTT +
Preference number: 2 (lower is better)
Translates to: QSPKCTFVCISSAQL*QVTVVVVAWIWNSF
Trigger: AAAGGAATTCCATATCCAGGCAACCACCACCACAGTCACCTGCAAAAGCTGAGCAGATGAAATACACACAAAGGTACACTTAGGACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR TCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGCAAAAGAGGATGCCCTaGAATCAGAGTTCTATGCTG +
Preference number: 2 (lower is better)
Translates to: NLSILVCHGPANSRSFRGQKRMP*NQSSML
Trigger: CAGCATAGAACTCTGATTTCAGGGCATCCTCTTTTG...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR TCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTGGAAGTATTCGTCATTaGGTGTACTTTTATCAGTTC +
Preference number: 2 (lower is better)
Translates to: DEENMPQMFASTPDSSKSGSIRH*VYFYQF
Trigger: GAACTGATAAAAGTACACTCAATGACGAATACTTCC...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR GCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGTTGTGGAGACAGGTCTaGAGTCCACCTGTTCATTAT +
Preference number: 2 (lower is better)
Translates to: NLSILVCHGPANSRSFRGLWRQV*SPPVHY
Trigger: ATAATGAACAGGTGGACTGCAGACCTGTCTCCACAA...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR GCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTCTCAGTTTTTGGTCCTaGCCTTCAAATAAGTATGTA +
Preference number: 2 (lower is better)
Translates to: DEENMPQMFASTPDSSKSLSFWS*PSNKYV
Trigger: TACATACTTATTTGAAGGGCAGGACCAAAAACTGAG...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAATCCATGCAGAAGCGGTaGGTTTCAGGGCTGAAAGGA +
Preference number: 2 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKSMQKR*VSGLKG
Trigger: TCCTTTCAGCCCTGAAACCCACCGCTTCTGCATGGA...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAATCGGCGAAAGCAGAATaGTTGAGGAGGTCACCCTGT +
Preference number: 2 (lower is better)
Translates to: REMESKKMKTKLQVEHPKSAKAE*LRRSPC
Trigger: ACAGGGTGACCTCCTCAACCATTCTGCTTTCGCCGA...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 90 bp GGGGCATATTCTAGGGCTCTAAATCAAATTAACACCTACAAAATGTaGATGCCCAGTTATATGCTGTCAGGCAATTGCCCAAGACTCCAG +
Preference number: 2 (lower is better)
Translates to: GAYSRALNQINTYKM*MPSYMLSGNCPRLQ
Trigger: CTGGAGTCTTGGGCAATTGCCTGACAGCATATAACTGGGCATCAACATTTTGTAGGTGTTAATTTGATTTAGAGCCCTAGAATATGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR TCA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAAACGAATGTTACCACATaGATCCCCACAACACCCCTG +
Preference number: 2 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKTNVTT*IPTTPL
Trigger: CAGGGGTGTTGTGGGGATTCATGTGGTAACATTCGT...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR TCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGAAGCGCACTTGGCCCTaGACTCATTTTGATAAATCA +
Preference number: 2 (lower is better)
Translates to: NLSILVCHGPANSRSFRGKRTWP*THFDKS
Trigger: TGATTTATCAAAATGAGTTCAGGGCCAAGTGCGCTT...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR GCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCCCAGCTCGGATGGATTaGTACCTGGGAAAATGGACC +
Preference number: 2 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIPARMD*YLGKWT
Trigger: GGTCCATTTTCCCAGGTAGCAATCCATCCGAGCTGG...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR-3UTR CCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCGGATGGATTGCTACCTaGGAAAATGGACCGACCCAG +
Preference number: 2 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIGWIAT*ENGPTQ
Trigger: CTGGGTCGGTCCATTTTCCCAGGTAGCAATCCATCC...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR-3UTR CCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGCATTACTTCAAATCCTaGTGGAGGAAGGAGGTTCAA +
Preference number: 2 (lower is better)
Translates to: NLSILVCHGPANSRSFRGHYFKS*WRKEVQ
Trigger: TTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATG...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCCAACCAGGGAATGGCTaGAGATGTGCTGGTTGTCTG +
Preference number: 2 (lower is better)
Translates to: KTLLVPSTSDKRYSISIIQPGNG*RCAGCL
Trigger: CAGACAACCAGCACATCTCCAGCCATTCCCTGGTTG...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGGAGAACAAAGGATCCTaGGTCATAGTCAGGAACAAT +
Preference number: 2 (lower is better)
Translates to: NLSILVCHGPANSRSFRGENKGS*VIVRNN
Trigger: ATTGTTCCTGACTATGACCCAGGATCCTTTGTTCTC...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR GCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGGATATGGAATTCCTTTaGCCTCAAATCTTCACATGC +
Preference number: 2 (lower is better)
Translates to: NLSILVCHGPANSRSFRGDMEFL*PQIFTC
Trigger: GCATGTGAAGATTTGAGGGCAAAGGAATTCCATATC...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCATTCCAACCAGGGAATaGCTGGAGATGTGCTGGTTG +
Preference number: 2 (lower is better)
Translates to: KTLLVPSTSDKRYSISIIIPTRE*LEMCWL
Trigger: CAACCAGCACATCTCCAGCCATTCCCTGGTTGGAAT...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 90 bp TCTCTAATCAATTACAGGCATCTGGGTGCTACGCCTAAAGACTCCTaGTCCCATTCTCTAAACTCCATTGAGGACCAGAAAATATACTTT +
Preference number: 2 (lower is better)
Translates to: SLINYRHLGATPKDS*SHSLNSIEDQKIYF
Trigger: AAAGTATATTTTCTGGTCCTCAATGGAGTTTAGAGAATGGGACAAGGAGTCTTTAGGCGTAGCACCCAGATGCCTGTAATTGATTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR TCA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTCTGCACAGAGTGCTTTaGTACAAGTATCCTCTTGCT +
Preference number: 2 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFLHRVL*YKYPLA
Trigger: AGCAAGAGGATACTTGTATCAAAGCACTCTGTGCAG...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR TCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAAGCTATGGAGACAAGGTaGACAAAGGTGAAAACACCA +
Preference number: 2 (lower is better)
Translates to: REMESKKMKTKLQVEHPKAMETR*TKVKTP
Trigger: TGGTGTTTTCACCTTTGTTCACCTTGTCTCCATAGC...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR TCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAAACCACTGGAAGCAACTaGATAAAGGTCAAGCACTTC +
Preference number: 2 (lower is better)
Translates to: REMESKKMKTKLQVEHPKTTGSN*IKVKHF
Trigger: GAAGTGCTTGACCTTTATTCAGTTGCTTCCAGTGGT...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR GCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCAGTCAACACAGAACATaGCAGGGTGAGTTCAGGCAA +
Preference number: 2 (lower is better)
Translates to: KTLLVPSTSDKRYSISIISQHRT*QGEFRQ
Trigger: TTGCCTGAACTCACCCTGGCATGTTCTGTGTTGACT...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR GCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGACCAGCTCTTACACCTaGTCTACCACACAATATTAT +
Preference number: 2 (lower is better)
Translates to: FLMISLITSNPGGGRRFKTSSYT*STTQYY
Trigger: ATAATATTGTGTGGTAGAGCAGGTGTAAGAGCTGGT...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR-3UTR GCA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCCAACTCTATGAAACCTaGCATATACCTGAGATTTAT +
Preference number: 2 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVQLYET*HIPEIY
Trigger: ATAAATCTCAGGTATATGGCAGGTTTCATAGAGTTG...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTTACTTCAAATCCTGGTaGAGGAAGGAGGTTCAAGAA +
Preference number: 2 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFYFKSW*RKEVQE
Trigger: TTCTTGAACCTCCTTCCTCCACCAGGATTTGAAGTA...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR GCA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAACTTGGTTATTTTGTTTaGATAACCCGCCTTGGGAAA +
Preference number: 2 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKLGYFV*ITRLGK
Trigger: TTTCCCAAGGCGGGTTATGCAAACAAAATAACCAAG...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGCCTGTTTGTTTTCAATaGAGTCATCTGAATGGTTCT +
Preference number: 2 (lower is better)
Translates to: FLMISLITSNPGGGRRFKPVCFQ*SHLNGS
Trigger: AGAACCATTCAGATGACTCCATTGAAAACAAACAGG...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR-3UTR CCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCATTAATCTTGTTGAGTaGGGGTACAGATGGGCAAAG +
Preference number: 2 (lower is better)
Translates to: KTLLVPSTSDKRYSISIIINLVE*GYRWAK
Trigger: CTTTGCCCATCTGTACCCCCACTCAACAAGATTAAT...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 90 bp CATAAAATTAAATCCTTCCGGATAAAGACTCACACTATGGTGACTTaGTCTTGGTTATTTTGTTTGCATAACCCGCCTTGGGAAAGTAAA +
Preference number: 2 (lower is better)
Translates to: HKIKSFRIKTHTMVT*SWLFCLHNPPWESK
Trigger: TTTACTTTCCCAAGGCGGGTTATGCAAACAAAATAACCAAGACAAAGTCACCATAGTGTGAGTCTTTATCCGGAAGGATTTAATTTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 90 bp TACCTTGACCTAAAATCATGCGTCCATGCCTGTTTTATATCTGCTTaGCCACAAATGGTATATACACATTCTCTAATCAATTACAGGCAT +
Preference number: 2 (lower is better)
Translates to: YLDLKSCVHACFISA*PQMVYTHSLINYRH
Trigger: ATGCCTGTAATTGATTAGAGAATGTGTATATACCATTTGTGGCAAAGCAGATATAAAACAGGCATGGACGCATGATTTTAGGTCAAGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR GCA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAAACTGAGCCAATAAGGTaGTTTCTACAGCTAATTTTT +
Preference number: 2 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKTEPIR*FLQLIF
Trigger: AAAAATTAGCTGTAGAAAGCACCTTATTGGCTCAGT...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR GCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCATACATGGAGGGGCATaGTCAGAAAGTTTTACTAAT +
Preference number: 2 (lower is better)
Translates to: KTLLVPSTSDKRYSISIIIHGGA*SESFTN
Trigger: ATTAGTAAAACTTTCTGAGCATGCCCCTCCATGTAT...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAAAAAAATCTGAGTTTCTaGGTAAGGAATTCAGATGAG +
Preference number: 2 (lower is better)
Translates to: REMESKKMKTKLQVEHPKKNLSF*VRNSDE
Trigger: CTCATCTGAATTCCTTACCCAGAAACTCAGATTTTT...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
37% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 72 bp CAGCCCAGGCTGGTTGCCCTATCCATGCAGAAGCGGTaGGTTTCAGGGCTGAAAGGAAGCGCACTTGGCCCT +
Preference number: 3 (lower is better)
Translates to: QPRLVALSMQKR*VSGLKGSALGP
Trigger: AGGGCCAAGTGCGCTTCCTTTCAGCCCTGAAACCCACCGCTTCTGCATGGATAGGGCAACCAGCCTGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 72 bp CTCCTCCCAGCTCGGATGGATTGCTACCTGGGAAAATaGACCGACCCAGGGAGTGGCAGGTCCCAAGGAAGA +
Preference number: 3 (lower is better)
Translates to: LLPARMDCYLGK*TDPGSGRSQGR
Trigger: TCTTCCTTGGGACCTGCCACTCCCTGGGTCGGTCCATTTTCCCAGGTAGCAATCCATCCGAGCTGGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR CCA 72 bp ACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTaGGAAAATGGACCGACCCAGGGAGTGGCAGGTCCC +
Preference number: 3 (lower is better)
Translates to: TKISSQLGWIAT*ENGPTQGVAGP
Trigger: GGGACCTGCCACTCCCTGGGTCGGTCCATTTTCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR CCA 72 bp ACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATaGATTGCTACCTGGGAAAATGGACCGACCCAGGGA +
Preference number: 3 (lower is better)
Translates to: TLPSTKISSQLG*IATWENGPTQG
Trigger: TCCCTGGGTCGGTCCATTTTCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR TCA 72 bp GGGAAGCCTTCATGTGAAGCTGACGAAGTCAGACCTTaGGAGATGGGCATGACTTGGGCCAGTGGAGCAGAG +
Preference number: 3 (lower is better)
Translates to: GKPSCEADEVRP*EMGMTWASGAE
Trigger: CTCTGCTCCACTGGCCCAAGTCATGCCCATCTCTCAAGGTCTGACTTCGTCAGCTTCACATGAAGGCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 72 bp CCAGACCCTCTAAGCTGCTATCTAAGGTCCCAGGCCTaGCTTCAGAAGGGGAATGGGGGACATGAGCATAGA +
Preference number: 3 (lower is better)
Translates to: PDPLSCYLRSQA*LQKGNGGHEHR
Trigger: TCTATGCTCATGTCCCCCATTCCCCTTCTGAAGCCAGGCCTGGGACCTTAGATAGCAGCTTAGAGGGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 72 bp GGGACAAGTTCCTTGCTTCGGCGAAAGCAGAATGGTTaGGGAGGTCACCCTGTCAGCTCCAAAACAGCTGAA +
Preference number: 3 (lower is better)
Translates to: GTSSLLRRKQNG*GGHPVSSKTAE
Trigger: TTCAGCTGTTTTGGAGCTGACAGGGTGACCTCCTCAACCATTCTGCTTTCGCCGAAGCAAGGAACTTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 72 bp AAAGGAGTAAATGTATCAGGGCCAGACCCTCTAAGCTaGTATCTAAGGTCCCAGGCCTGGCTTCAGAAGGGG +
Preference number: 3 (lower is better)
Translates to: KGVNVSGPDPLS*YLRSQAWLQKG
Trigger: CCCCTTCTGAAGCCAGGCCTGGGACCTTAGATAGCAGCTTAGAGGGTCTGGCCCTGATACATTTACTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 72 bp TGCAGTCTGATTCAAGTCCAAGTTGTTCCAGGTCCGTaGTTAGTCTCCTGGGTAGCCCACAGCCTTGGTAGT +
Preference number: 3 (lower is better)
Translates to: CSLIQVQVVPGP*LVSWVAHSLGS
Trigger: ACTACCAAGGCTGTGGGCTACCCAGGAGACTAATCACGGACCTGGAACAACTTGGACTTGAATCAGACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 72 bp CATGGACAAAAGCGAAGTAGGATTCCAACCAGGGAATaGCTGGAGATGTGCTGGTTGTCTGAACACAGGGTG +
Preference number: 3 (lower is better)
Translates to: HGQKRSRIPTRE*LEMCWLSEHRV
Trigger: CACCCTGTGTTCAGACAACCAGCACATCTCCAGCCATTCCCTGGTTGGAATCCTACTTCGCTTTTGTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 72 bp ATTGCAAAACAGAGGGTGCAGGTAAGTGTTTCCAGGTaGTGTCCGCCCATTAGCCCCGAAATGTGGGTTCAA +
Preference number: 3 (lower is better)
Translates to: IAKQRVQVSVSR*CPPISPEMWVQ
Trigger: TTGAACCCACATTTCGGGGCTAATGGGCGGACACCACCTGGAAACACTTACCTGCACCCTCTGTTTTGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CAA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTGGTAGGTGGAGAGTATaGTCATCCCCACTTTACAGG +
Preference number: 3 (lower is better)
Translates to: DEENMPQMFASTPDSSKSGRWRV*SSPLYR
Trigger: CCTGTAAAGTGGGGATGACAATACTCTCCACCTACC...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 72 bp GGATGCCCTGAAATCAGAGTTCTATGCTGTTCTATTTaGCACTCTACAACCAGTGTAGATCCCAGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: GCPEIRVLCCSI*HSTTSVDPRAR
Trigger: CCTGGCCCTGGGATCTACACTGGTTGTAGAGTGGCAAATAGAACAGCATAGAACTCTGATTTCAGGGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CAA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCCCCAGCTCGGATGGATaGCTACCTGGGAAAATGGAC +
Preference number: 3 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVPSSDG*LPGKMD
Trigger: GTCCATTTTCCCAGGTAGCAATCCATCCGAGCTGGG...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CAA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGTTCTGCTCATTAATCTaGTTGAGTGGGGGTACAGAT +
Preference number: 3 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQFCSLI*LSGGTD
Trigger: ATCTGTACCCCCACTCAACAAGATTAATGAGCAGAA...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CAA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGATGGGCAGGGCTCACTaGAGGAGTAGACTGCAGTCT +
Preference number: 3 (lower is better)
Translates to: NLSILVCHGPANSRSFRGMGRAH*RSRLQS
Trigger: AGACTGCAGTCTACTCCTCAAGTGAGCCCTGCCCAT...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 72 bp TTGCTAGAGAGAGGGGAGGCAAACAGTCCTCCCAAATaGTGCTGCAGCCTCAAACAGGCTTATCCATTCATA +
Preference number: 3 (lower is better)
Translates to: LLERGEANSPPK*CCSLKQAYPFI
Trigger: TATGAATGGATAAGCCTGTTTGAGGCTGCAGCATCATTTGGGAGGACTGTTTGCCTCCCCTCTCTCTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 72 bp ACCCTAACACCACAGTATACATGGGCAGGGCTCACTTaGGGAGTAGACTGCAGTCTGATTCAAGTCCAAGTT +
Preference number: 3 (lower is better)
Translates to: TLTPQYTWAGLT*GVDCSLIQVQV
Trigger: AACTTGGACTTGAATCAGACTGCAGTCTACTCCTCAAGTGAGCCCTGCCCATGTATACTGTGGTGTTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 72 bp TCCAACCAGGGAATGGCTGGAGATGTGCTGGTTGTCTaGACACAGGGTGACTTCTCAGGTAACATGCATTTT +
Preference number: 3 (lower is better)
Translates to: SNQGMAGDVLVV*TQGDFSGNMHF
Trigger: AAAATGCATGTTACCTGAGAAGTCACCCTGTGTTCAGACAACCAGCACATCTCCAGCCATTCCCTGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 72 bp GGAAAGGTAAATGACCCTCTTCCCTCTGATGAGTCCTaGAAGCTAGGACAGCAAAGCTTCCCTAACAGGACA +
Preference number: 3 (lower is better)
Translates to: GKVNDPLPSDES*KLGQQSFPNRT
Trigger: TGTCCTGTTAGGGAAGCTTTGCTGTCCTAGCTTTCAGGACTCATCAGAGGGAAGAGGGTCATTTACCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CAA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCCCAGCTCGGATGGATaGCTACCTGGGAAAATGGAC +
Preference number: 3 (lower is better)
Translates to: NKAAIVQLACENSAKHEDPSSDG*LPGKMD
Trigger: GTCCATTTTCCCAGGTAGCAATCCATCCGAGCTGGG...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
3UTR-3UTR CAA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGCTGGGGACAAGTTCCTaGCTTCGGCGAAAGCAGAAT +
Preference number: 3 (lower is better)
Translates to: NLSILVCHGPANSRSFRGLGTSS*LRRKQN
Trigger: ATTCTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAG...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 72 bp CCTTTGTGTGTATTTCATCTGCTCAGCTTTTGCAGGTaGCTGTGGTGGTGGTTGCCTGGATATGGAATTCCT +
Preference number: 3 (lower is better)
Translates to: PLCVFHLLSFCR*LWWWLPGYGIP
Trigger: AGGAATTCCATATCCAGGCAACCACCACCACAGTCACCTGCAAAAGCTGAGCAGATGAAATACACACAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 72 bp GTCCGCCCATTAGCCCCGAAATGTGGGTTCAAATTATaGCAACATTGGCCCTTCCTATCTCAGATACCTAAA +
Preference number: 3 (lower is better)
Translates to: VRPLAPKCGFKL*QHWPFLSQIPK
Trigger: TTTAGGTATCTGAGATAGGAAGGGCCAATGTTGGCATAATTTGAACCCACATTTCGGGGCTAATGGGCGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 72 bp AGCAAGATGGCACCACCTAGAAAACTTTCAATTGCCTaGTACATCTCTACCACAGCCATACCACATGGTTGC +
Preference number: 3 (lower is better)
Translates to: SKMAPPRKLSIA*YISTTAIPHGC
Trigger: GCAACCATGTGGTATGGCTGTGGTAGAGATGTATCAGGCAATTGAAAGTTTTCTAGGTGGTGCCATCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 72 bp CAATTGCCCAAGACTCCAGATAGCAATGTCCATTCATaGCCCTGTAAGAGGTACCTGGATGGAATGACTTAT +
Preference number: 3 (lower is better)
Translates to: QLPKTPDSNVHS*PCKRYLDGMTY
Trigger: ATAAGTCATTCCATCCAGGTACCTCTTACAGGGGCATGAATGGACATTGCTATCTGGAGTCTTGGGCAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CAA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAAAGGACAACCCATGCTTaGTGGAGACAGGTCTGCAGT +
Preference number: 3 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKRTTHA*WRQVCS
Trigger: ACTGCAGACCTGTCTCCACAAAGCATGGGTTGTCCT...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 72 bp CAGCACGTATTCCCAGTTACATATGCCCTACACAATTaGTTAAGTGGTAAGCAGTCTGAAAAACTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: QHVFPVTYALHN*LSGKQSEKLSS
Trigger: GGAGGAGAGTTTTTCAGACTGCTTACCACTTAAGCAATTGTGTAGGGCATATGTAACTGGGAATACGTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 72 bp AAAATGTTGATGCCCAGTTATATGCTGTCAGGCAATTaGCCAAGACTCCAGATAGCAATGTCCATTCATGCC +
Preference number: 3 (lower is better)
Translates to: KMLMPSYMLSGN*PRLQIAMSIHA
Trigger: GGCATGAATGGACATTGCTATCTGGAGTCTTGGGCAATTGCCTGACAGCATATAACTGGGCATCAACATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 72 bp GAGGGACTCAGACCCTCAGTTTTCCAAACTTCACCATaGAAAAACCATCGCTGTCATCAACATTTGAGTTGT +
Preference number: 3 (lower is better)
Translates to: EGLRPSVFQTSP*KNHRCHQHLSC
Trigger: ACAACTCAAATGTTGATGACAGCGATGGTTTTTCCATGGTGAAGTTTGGAAAACTGAGGGTCTGAGTCCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CAA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCCTGGAGATGTGCTGGTaGTCTGAACACAGGGTGACT +
Preference number: 3 (lower is better)
Translates to: KTLLVPSTSDKRYSISIILEMCW*SEHRVT
Trigger: AGTCACCCTGTGTTCAGACAACCAGCACATCTCCAG...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 72 bp TCTCCTCCTACTCAGTTAAATTCTAATACCACCAAATaGGGGACTCAGACCCTCAGTTTTCCAAACTTCACC +
Preference number: 3 (lower is better)
Translates to: SPPTQLNSNTTK*GTQTLSFPNFT
Trigger: GGTGAAGTTTGGAAAACTGAGGGTCTGAGTCCCTCATTTGGTGGTATTAGAATTTAACTGAGTAGGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 72 bp GGGAAAAGGACAACCCATGCTTTGTGGAGACAGGTCTaGAGTCCACCTGTTCATTATATTCATATTTTCAGT +
Preference number: 3 (lower is better)
Translates to: GKRTTHALWRQV*SPPVHYIHIFS
Trigger: ACTGAAAATATGAATATAATGAACAGGTGGACTGCAGACCTGTCTCCACAAAGCATGGGTTGTCCTTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 72 bp TTCTCAAATAAATCAAACATAGGCAACGTAACACTCTaGAGTCAACACAGAACATGCCAGGGTGAGTTCAGG +
Preference number: 3 (lower is better)
Translates to: FSNKSNIGNVTL*SQHRTCQGEFR
Trigger: CCTGAACTCACCCTGGCATGTTCTGTGTTGACTCCAGAGTGTTACGTTGCCTATGTTTGATTTATTTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CAA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAACAGAAATGCCACCAGTaGGCCTTAAAACACACTTGC +
Preference number: 3 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKQKCHQ*ALKHTC
Trigger: GCAAGTGTGTTTTAAGGCCAACTGGTGGCATTTCTG...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CAA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGATGGAAAGAACCATATaGACCTCAGTTTTTGGTCCT +
Preference number: 3 (lower is better)
Translates to: NLSILVCHGPANSRSFRGMERTI*TSVFGP
Trigger: AGGACCAAAAACTGAGGTCAATATGGTTCTTTCCAT...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR GCA 72 bp TTCAGATTGATGCTGAAATTCACAGACAATACATCCTaGATTTGCATTATCTGGGTATCACCTCACCCCTAC +
Preference number: 3 (lower is better)
Translates to: FRLMLKFTDNTS*ICIIWVSPHPY
Trigger: GTAGGGGTGAGGTGATACCCAGATAATGCAAATGCAGGATGTATTGTCTGTGAATTTCAGCATCAATCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CCA 72 bp TTCCGGATAAAGACTCACACTATGGTGACTTTGTCTTaGTTATTTTGTTTGCATAACCCGCCTTGGGAAAGT +
Preference number: 3 (lower is better)
Translates to: FRIKTHTMVTLS*LFCLHNPPWES
Trigger: ACTTTCCCAAGGCGGGTTATGCAAACAAAATAACCAAGACAAAGTCACCATAGTGTGAGTCTTTATCCGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CAA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAAGTCCTAAGTGTACCTTaGTGTGTATTTCATCTGCTC +
Preference number: 3 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKVLSVP*CVFHLL
Trigger: GAGCAGATGAAATACACACAAAGGTACACTTAGGAC...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 72 bp GTCCTTATATCTGTTCTGATGGAGAGTAAAGCTCAATaGTTCTGCTCATTAATCTTGTTGAGTGGGGGTACA +
Preference number: 3 (lower is better)
Translates to: VLISVLMESKAQ*FCSLILLSGGT
Trigger: TGTACCCCCACTCAACAAGATTAATGAGCAGAATCATTGAGCTTTACTCTCCATCAGAACAGATATAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 72 bp CCAAAATCTTGCTGTGAATCTCTGACCCTAAAGACTTaGGCATATCATGGCCATATTACCATATGCCAGTTT +
Preference number: 3 (lower is better)
Translates to: PKSCCESLTLKT*AYHGHITICQF
Trigger: AAACTGGCATATGGTAATATGGCCATGATATGCTCAAGTCTTTAGGGTCAGAGATTCACAGCAAGATTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR TCA 72 bp TATCCATCTTTTACTCCAGATTACTTGTTTTCCTACTaGAATGGTCAGTTTGGTGCTGCTAGACCATATCTG +
Preference number: 3 (lower is better)
Translates to: YPSFTPDYLFSY*NGQFGAARPYL
Trigger: CAGATATGGTCTAGCAGCACCAAACTGACCATTTCAGTAGGAAAACAAGTAATCTGGAGTAAAAGATGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR-3UTR CAA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCAACAAGGGAATCCTTTaGAACTTCCCAAGTTATATC +
Preference number: 3 (lower is better)
Translates to: KTLLVPSTSDKRYSISIINKGIL*NFPSYI
Trigger: GATATAACTTGGGAAGTTCAAAAGGATTCCCTTGTT...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGATGCATGCTGCGCGGCTaGCTCCGGGCGCCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGCMLRG*LRAPLP
Trigger: TGGGAGGGGCGCCCGGAGCCAGCCGCGCAGCATGCA...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCCACCACGCACGGCCTaGACGAAGCAAAGCCAACCC +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYPPRTA*TKQSQP
Trigger: GGGTTGGCTTTGCTTCGTCCAGGCCGTGCGTGGTGG...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGATGCTACCTGGGAAAATaGACCGACCCAGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGCYLGK*TDPGSG
Trigger: GCCACTCCCTGGGTCGGTCCATTTTCCCAGGTAGCA...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGACCTGGCTGCACTGGATaGCTCCCATGGAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGPGCTG*LPWRSY
Trigger: ATAGCTCCTCCATGGGAGCCATCCAGTGCAGCCAGG...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGAGTTGTTCCAGGTCCGTaGTTAGTCTCCTGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGVVPGP*LVSWVA
Trigger: GGCTACCCAGGAGACTAATCACGGACCTGGAACAAC...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGACCAGACCCTCTAAGCTaGTATCTAAGGTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGPDPLS*YLRSQA
Trigger: GGCCTGGGACCTTAGATAGCAGCTTAGAGGGTCTGG...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGTCAACCTGGCTGCACTaGATGGCTCCCATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQSTWLH*MAPMEE
Trigger: CTCCTCCATGGGAGCCATCCAGTGCAGCCAGGTTGA...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACGCTCCTCCACCATCTTaGTCACCGCTCTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYAPPPS*SPLWRW
Trigger: CCATCTCCAGAGCGGTGACCAAGATGGTGGAGGAGC...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACAAGGAAGAGGGTCAGTaGGGCTGGACGTCACTTGCA +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYKEEGQ*GWTSLA
Trigger: TGCAAGTGACGTCCAGCCTCACTGACCCTCTTCCTT...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR GCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGAAGCCGAAGAAGGAGATaGTCTGGTTCCAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGSRRRR*SGSSSD
Trigger: ATCTGAGCTGGAACCAGAGCATCTCCTTCTTCGGCT...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTGGGTGTGGGTTTTGCTaGCTTCGCTGCTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DEENMPQMFASTPDSSKSGCGFC*LRCSPQ
Trigger: CTGAGGAGAGCAGCGAAGGCAGCAAAACCCACACCC...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGATCCTCCCAGCTCGGATaGATTGCTACCTGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGSSQLG*IATWEN
Trigger: ATTTTCCCAGGTAGCAATCCATCCGAGCTGGGAGGA...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR GCA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCGAGCAGATACGCAGCTaGGGCCAGCAAAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVEQIRS*GQQSSP
Trigger: GGGGGAGCTTTGCTGGCCGCAGCTGCGTATCTGCTC...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCGGAGAAGCGGCCAATaGCGTGGCCGTGCATCTCGC +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDRRSGQ*RGRASR
Trigger: GCGAGATGCACGGCCACGGCATTGGCCGCTTCTCCG...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGAGAAAAGGACAACCCATaGTTTGTGGAGACAGGTCTG +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGEKDNP*FVETGL
Trigger: CAGACCTGTCTCCACAAAGCATGGGTTGTCCTTTTC...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTACAAAGTCAGCTCACTaGAGCCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: DEENMPQMFASTPDSSKSTKSAH*SLHLLG
Trigger: ACCCAGGAGGTGGAGGCTGCAGTGAGCTGACTTTGT...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGTCTTGGTCACCGCTCTaGAGATGGCTCTTTCATGAG +
Preference number: 4 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQSWSPL*RWLFHE
Trigger: CTCATGAAAGAGCCATCTCCAGAGCGGTGACCAAGA...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACTCCATGCAGAAGCGGTaGGTTTCAGGGCTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYSMQKR*VSGLKG
Trigger: TCCTTTCAGCCCTGAAACCCACCGCTTCTGCATGGA...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGATATGAGGAGTCTTGGTaGTTTGGGAATCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGYEESW*FGNPSC
Trigger: GCAAGATGGATTCCCAAATCACCAAGACTCCTCATA...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGAACCACTGGAAGCAACTaGATAAAGGTCAAGCACTTC +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGTTGSN*IKVKHF
Trigger: GAAGTGCTTGACCTTTATTCAGTTGCTTCCAGTGGT...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACGGTCCACATTGCCTGTaGCAAGTGTCCAAAGACAGT +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYGPHCL*QVSKDS
Trigger: ACTGTCTTTGGACACTTGGCACAGGCAATGTGGACC...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR GCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGATTGTCATCATCGTGGTaGCACTCTGGCCAAAATTTC +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGLSSSW*HSGQNF
Trigger: GAAATTTTGGCCAGAGTGGCACCACGATGATGACAA...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR GCA 90 bp AAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCTCGGGTGTGGGTTTTGCTaGCTTCGCTGCTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: KAAIVQLACENSAKHEDLGCGFC*LRCSPQ
Trigger: CTGAGGAGAGCAGCGAAGGCAGCAAAACCCACACCC...GAGATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTTCGGCGAAAGCAGAATaGTTGAGGAGGTCACCCTGT +
Preference number: 4 (lower is better)
Translates to: DEENMPQMFASTPDSSKSSAKAE*LRRSPC
Trigger: ACAGGGTGACCTCCTCAACCATTCTGCTTTCGCCGA...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGCTGCACAGAGTGCTTTaGTACAAGTATCCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQLHRVL*YKYPLA
Trigger: AGCAAGAGGATACTTGTATCAAAGCACTCTGTGCAG...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTGATGTGCTGGTTGTCTaGACACAGGGTGACTTCTCA +
Preference number: 4 (lower is better)
Translates to: DEENMPQMFASTPDSSKSDVLVV*TQGDFS
Trigger: TGAGAAGTCACCCTGTGTTCAGACAACCAGCACATC...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGAGTCAGACATTTGGCATaGTGTAGATCACTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGVRHLA*CRSLGK
Trigger: TTTTCCCAGTGATCTACATCATGCCAAATGTCTGAC...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACAAAGCTTGGGCCCCATaGTGTACTTCTTATCACCTG +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYKAWAP*CTSYHL
Trigger: CAGGTGATAAGAAGTACATCATGGGGCCCAAGCTTT...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538471.1
CDS-3UTR CCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGACCTCAGACTCATAGATaGTATTGTCATCATCGTGGT +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGPQTHR*YCHHRG
Trigger: ACCACGATGATGACAATACCATCTATGAGTCTGAGG...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGAGGAGTCTTGGTGATTTaGGAATCCATCTTGCTATTC +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGGVLVI*ESILLF
Trigger: GAATAGCAAGATGGATTCCCAAATCACCAAGACTCC...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCAAGGAAGAGGGTCAGTaGGGCTGGACGTCACTTGCA +
Preference number: 4 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVKEEGQ*GWTSLA
Trigger: TGCAAGTGACGTCCAGCCTCACTGACCCTCTTCCTT...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACAGGAAACACAGAACTTaGACAAGAAGCCAGATGACC +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYRKHRT*TRSQMT
Trigger: GGTCATCTGGCTTCTTGTTCAAGTTCTGTGTTTCCT...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGAGATATGGAATTCCTTTaGCCTCAAATCTTCACATGC +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGDMEFL*PQIFTC
Trigger: GCATGTGAAGATTTGAGGGCAAAGGAATTCCATATC...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACATCGTGGTGCCACTCTaGCCAAAATTTCCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYIVVPL*PKFPPY
Trigger: ATAAGGAGGAAATTTTGGCCAGAGTGGCACCACGAT...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp AAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCTCGGATGGATTGCTACCTaGGAAAATGGACCGACCCAG +
Preference number: 4 (lower is better)
Translates to: KAAIVQLACENSAKHEDLGWIAT*ENGPTQ
Trigger: CTGGGTCGGTCCATTTTCCCAGGTAGCAATCCATCC...GAGATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGGTGCCTTCACAAATATaGGTAAGCCAACAGTTCATC +
Preference number: 4 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQVPSQI*VSQQFI
Trigger: GATGAACTGTTGGCTTACCCATATTTGTGAAGGCAC...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 72 bp TACCCTAACACCACAGTATACATGGGCAGGGCTCACTaGAGGAGTAGACTGCAGTCTGATTCAAGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: YPNTTVYMGRAH*RSRLQSDSSPS
Trigger: ACTTGGACTTGAATCAGACTGCAGTCTACTCCTCAAGTGAGCCCTGCCCATGTATACTGTGGTGTTAGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 72 bp ATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCTaGACCAGGCTGACAGGACATGGACAAAAGCGAAGT +
Preference number: 4 (lower is better)
Translates to: IPCTDERSLVLV*TRLTGHGQKRS
Trigger: ACTTCGCTTTTGTCCATGTCCTGTCAGCCTGGTCAAGACCAATACAAGAGACCTCTCATCAGTGCAGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 72 bp CTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATaGGTCTTGACCAGGCTGACAGGACATGGACAAAAG +
Preference number: 4 (lower is better)
Translates to: LAIPCTDERSLV*VLTRLTGHGQK
Trigger: CTTTTGTCCATGTCCTGTCAGCCTGGTCAAGACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATTCTTCCGGGTCTCATTaGGATTGTCCACCCACTGGC +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDSSGSH*DCPPTG
Trigger: GCCAGTGGGTGGACAATCTCAATGAGACCCGGAAGA...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGATCCGAATCAAAGAGTaGGTGTCCAGTAAAATCTGT +
Preference number: 4 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQIRIKE*VSSKIC
Trigger: ACAGATTTTACTGGACACTCACTCTTTGATTCGGAT...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGTGGGCAGGGCTCACTTaGGGAGTAGACTGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKWAGLT*GVDCSL
Trigger: CAGACTGCAGTCTACTCCTCAAGTGAGCCCTGCCCA...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTGCTATGGAGACAAGGTaGACAAAGGTGAAAACACCA +
Preference number: 4 (lower is better)
Translates to: DEENMPQMFASTPDSSKSAMETR*TKVKTP
Trigger: TGGTGTTTTCACCTTTGTTCACCTTGTCTCCATAGC...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGCTTGAGAGATGGGCATaGCTTGGGCCAGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKLERWA*LGPVEQ
Trigger: CTGCTCCACTGGCCCAAGTCATGCCCATCTCTCAAG...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACGAATACAGGAAAACCTaGTTGTGCAGACCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYEYRKT*LCRPFF
Trigger: GAAGAAAGGTCTGCACAATCAGGTTTTCCTGTATTC...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGAAAGACATGTAATCAGTaGGATGATGAATTATCAGGC +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGKTCNQ*DDELSG
Trigger: GCCTGATAATTCATCATCTCACTGATTACATGTCTT...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCTCGGTCCACATTGCCTGTaGCAAGTGTCCAAAGACAGT +
Preference number: 4 (lower is better)
Translates to: KAAIVQLACENSAKHEDLGPHCL*QVSKDS
Trigger: ACTGTCTTTGGACACTTGGCACAGGCAATGTGGACC...GAGATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR GCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTTTGTGGAGACAGGTCTaGAGTCCACCTGTTCATTAT +
Preference number: 4 (lower is better)
Translates to: DEENMPQMFASTPDSSKSLWRQV*SPPVHY
Trigger: ATAATGAACAGGTGGACTGCAGACCTGTCTCCACAA...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAACTCACCCTGAGGCAATaGCACACCCCATCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKLTLRQ*HTPSGP
Trigger: TGGCCCTGATGGGGTGTGGCATTGCCTCAGGGTGAG...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACTGTGGGTTCAAATTATaGCAACATTGGCCCTTCCTA +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYCGFKL*QHWPFL
Trigger: TAGGAAGGGCCAATGTTGGCATAATTTGAACCCACA...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTAAGCGGCCAATGCCGTaGCCGTGCATCTCGCGTTTC +
Preference number: 4 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFKRPMP*PCISRF
Trigger: GAAACGCGAGATGCACGGCCACGGCATTGGCCGCTT...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACTACTTCAAATCCTGGTaGAGGAAGGAGGTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYYFKSW*RKEVQE
Trigger: TTCTTGAACCTCCTTCCTCCACCAGGATTTGAAGTA...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTGTGGTTGCCTGGATATaGAATTCCTTTGCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: DEENMPQMFASTPDSSKSVVAWI*NSFALK
Trigger: TTTGAGGGCAAAGGAATTCCATATCCAGGCAACCAC...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGCAACCAGGGAATGGCTaGAGATGTGCTGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: NLSILVCHGPANSRSFRGQPGNG*RCAGCL
Trigger: CAGACAACCAGCACATCTCCAGCCATTCCCTGGTTG...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGAAAAGGAAACGGACATTaGATCATTTCAGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGKGNGH*IISDFQ
Trigger: CTGGAAATCTGAAATGATCCAATGTCCGTTTCCTTT...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCAGCCCAGCCCTGCCATaGTCCCACCGTAATCCTGCA +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIISPALP*SHRNPA
Trigger: TGCAGGATTACGGTGGGATCATGGCAGGGCTGGGCT...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACATCCGAATCAAAGAGTaGGTGTCCAGTAAAATCTGT +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYIRIKE*VSSKIC
Trigger: ACAGATTTTACTGGACACTCACTCTTTGATTCGGAT...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR TCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACATAAAAACTATCAGCTaGCAACCAGCTCTTACACCT +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYIKTIS*QPALTP
Trigger: AGGTGTAAGAGCTGGTTGTCAGCTGATAGTTTTTAT...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR TCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACACACCTACAAAATGTTaGTGCCCAGTTATATGCTGT +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYTPTKC*CPVICC
Trigger: ACAGCATATAACTGGGCATCAACATTTTGTAGGTGT...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGGTGGATGCAAGAGCTTaGTTTACTTTTACAATGACA +
Preference number: 4 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQVDARA*FTFTMT
Trigger: TGTCATTGTAAAAGTAAATCAAGCTCTTGCATCCAC...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCGGTGGGTTTCAGGGCTaGAAGGAAGCGCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIIGGFQG*KEAHLA
Trigger: GGCCAAGTGCGCTTCCTTTCAGCCCTGAAACCCACC...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCTCTTTTGCTGCCTTCGCTaGTCTCCTCAGACTCATAGA +
Preference number: 4 (lower is better)
Translates to: KAAIVQLACENSAKHEDLFCCLR*SPQTHR
Trigger: TCTATGAGTCTGAGGAGAGCAGCGAAGGCAGCAAAA...GAGATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR GCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCCAGCTCGGATGGATTaGTACCTGGGAAAATGGACC +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDPARMD*YLGKWT
Trigger: GGTCCATTTTCCCAGGTAGCAATCCATCCGAGCTGG...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR GCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACACCAGCTCTTACACCTaGTCTACCACACAATATTAT +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYTSSYT*STTQYY
Trigger: ATAATATTGTGTGGTAGAGCAGGTGTAAGAGCTGGT...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR GCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGTGGGGACAAGTTCCTTaGTTCGGCGAAAGCAGAATG +
Preference number: 4 (lower is better)
Translates to: NLSILVCHGPANSRSFRGWGQVP*FGESRM
Trigger: CATTCTGCTTTCGCCGAAGCAAGGAACTTGTCCCCA...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATAAAGGTCTCAACATGTaGTCCCAGCTCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDKGLNM*SQLSLS
Trigger: GGAGAGGGAGAGCTGGGAGCACATGTTGAGACCTTT...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTCATTACTTCAAATCCTaGTGGAGGAAGGAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: DEENMPQMFASTPDSSKSHYFKS*WRKEVQ
Trigger: TTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATG...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGGAGTGGGGGTACAGATaGGCAAAGAGAGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKEWGYR*AKRGGC
Trigger: GCATCCACCTCTCTTTGCCCATCTGTACCCCCACTC...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCTCGCCCAGCATTTAGCCTaGGAAGTATTCGTCATTGAG +
Preference number: 4 (lower is better)
Translates to: KAAIVQLACENSAKHEDLAQHLA*EVFVIE
Trigger: CTCAATGACGAATACTTCCCAGGCTAAATGCTGGGC...GAGATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGGTAAGTGTTTCCAGGTaGTGTCCGCCCATTAGCCCC +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKVSVSR*CPPISP
Trigger: GGGGCTAATGGGCGGACACCACCTGGAAACACTTAC...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGAAAGCTTGGGCCCCATaGTGTACTTCTTATCACCCA +
Preference number: 4 (lower is better)
Translates to: NLSILVCHGPANSRSFRGKAWAP*CTSYHP
Trigger: TGGGTGATAAGAAGTACATCATGGGGCCCAAGCTTT...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTTACTTGTTTTCCTACTaGAATGGTCAGTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: DEENMPQMFASTPDSSKSYLFSY*NGQFGA
Trigger: AGCACCAAACTGACCATTTCAGTAGGAAAACAAGTA...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCACTTCGTAACACTCTaGGGCACACTGGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDHFVTL*GTLGMK
Trigger: TTTCATGCCCAGTGTGCCTCAGAGTGTTACGAAGTG...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCATCGGAGCCCAGCCCTaGCATGATCCCACCGTAATC +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIIGAQP*HDPTVI
Trigger: GATTACGGTGGGATCATGGCAGGGCTGGGCTCCGAT...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGAGTCAACACAGAACATaGCAGGGTGAGTTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: NLSILVCHGPANSRSFRGSQHRT*QGEFRQ
Trigger: TTGCCTGAACTCACCCTGGCATGTTCTGTGTTGACT...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCTCAGCCCAGGCTGGTTaGCCTATCCATGCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIISAQAG*PIHAEA
Trigger: CGCTTCTGCATGGATAGGGCAACCAGCCTGGGCTGA...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATAAGAAGGAGATGCTCTaGTTCCAGCTCAGATCCACC +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDKKEML*FQLRST
Trigger: GGTGGATCTGAGCTGGAACCAGAGCATCTCCTTCTT...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCTCGTATTGTCATCATCGTaGTGCCACTCTGGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: KAAIVQLACENSAKHEDLVLSSS*CHSGQN
Trigger: ATTTTGGCCAGAGTGGCACCACGATGATGACAATAC...GAGATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTGAGCAATCCTTATGTTaGTCAGAAGCAAAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: DEENMPQMFASTPDSSKSEQSLC*SEAKQF
Trigger: AAACTGCTTTGCTTCTGACCAACATAAGGATTGCTC...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATATTCCAACCAGGGAATaGCTGGAGATGTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDIPTRE*LEMCWL
Trigger: CAACCAGCACATCTCCAGCCATTCCCTGGTTGGAAT...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCACCTTCAGCCCAGGCTaGTTGCCCTATCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: IFLMISLITSNPGGGRRFTFSPG*LPYPCR
Trigger: TCTGCATGGATAGGGCAACCAGCCTGGGCTGAAGGT...GAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCCTAAGGTCCCAGGCCTaGCTTCAGAAGGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTILRSQA*LQKGNG
Trigger: CCCATTCCCCTTCTGAAGCCAGGCCTGGGACCTTAG...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACTATACAAGGGGAAATTaGTCTATTATAAGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: CENSAKHEDLLPARMDCYYTRGN*SIIRPS
Trigger: GCTAGGCCTTATAATAGACCAATTTCCCCTTGTATA...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 72 bp CTACTAAAATGTGGTGGGAAAAGGACAACCCATGCTTaGTGGAGACAGGTCTGCAGTCCACCTGTTCATTAT +
Preference number: 4 (lower is better)
Translates to: LLKCGGKRTTHA*WRQVCSPPVHY
Trigger: ATAATGAACAGGTGGACTGCAGACCTGTCTCCACAAAGCATGGGTTGTCCTTTTCCCACCACATTTTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGTCACTGGGCAGTGGCTaGAAACACCAGAAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKSLGSG*KHQKSC
Trigger: GCAACTTTTCTGGTGTTTTCAGCCACTGCCCAGTGA...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCTCGAACAAGAAGCCAGATaGCCAAAATGTCCCTTAACT +
Preference number: 4 (lower is better)
Translates to: KAAIVQLACENSAKHEDLEQEAR*PKCPLT
Trigger: AGTTAAGGGACATTTTGGTCATCTGGCTTCTTGTTC...GAGATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCTCACAATCACATGCAATTaGTCCCTGGACCTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: KAAIVQLACENSAKHEDLTITCN*SLDLLK
Trigger: CTTTAACAGGTCCAGGGATCAATTGCATGTGATTGT...GAGATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCCGAAAGCAGAATGGTTaGGGAGGTCACCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIIRKQNG*GGHPVS
Trigger: GCTGACAGGGTGACCTCCTCAACCATTCTGCTTTCG...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAACCCTCTGATGAGTCCTaGAAGCTAGGACAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKPSDES*KLGQQS
Trigger: GCTTTGCTGTCCTAGCTTTCAGGACTCATCAGAGGG...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTCCAATGCCGTGGCCGTaGATCTCGCGTTTCACAATT +
Preference number: 4 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFPMPWP*ISRFTI
Trigger: AATTGTGAAACGCGAGATGCACGGCCACGGCATTGG...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCTTGTCATCATCGTGGTaGCACTCTGGCCAAAATTTC +
Preference number: 4 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVLSSSW*HSGQNF
Trigger: GAAATTTTGGCCAGAGTGGCACCACGATGATGACAA...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAACCAGCTCGGATGGATTaGTACCTGGGAAAATGGACC +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKPARMD*YLGKWT
Trigger: GGTCCATTTTCCCAGGTAGCAATCCATCCGAGCTGG...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGACTTGTTCTCAGCATTaGTCTCCTCTCACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKTCSQH*SPLTGQ
Trigger: CTGCCCAGTGAGAGGAGAGCAATGCTGAGAACAAGT...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCATGGATCAACCTGGCTaGACTGGATGGCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIMDQPG*TGWLPW
Trigger: CCATGGGAGCCATCCAGTGCAGCCAGGTTGATCCAT...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAATGGTTGCCCTATCCATaGAGAAGCGGTGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKWLPYP*RSGGFQ
Trigger: CTGAAACCCACCGCTTCTGCATGGATAGGGCAACCA...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTATACATGGAGGGGCATaGTCAGAAAGTTTTACTAAT +
Preference number: 4 (lower is better)
Translates to: DEENMPQMFASTPDSSKSIHGGA*SESFTN
Trigger: ATTAGTAAAACTTTCTGAGCATGCCCCTCCATGTAT...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCATGACCAGGAGTTCGTaGAGCAGATACGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIMTRSS*SRYAAA
Trigger: CGCAGCTGCGTATCTGCTCCACGAACTCCTGGTCAT...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCTCACCGCTCTGGAGATaGCTCTTTCATGAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: IFLMISLITSNPGGGRRFSPLWR*LFHEGQ
Trigger: TTGGCCCTCATGAAAGAGCCATCTCCAGAGCGGTGA...GAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATAGTGTCCAAAGACAGTaGCGTCAAGAGTGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDSVQRQ*RQEWKA
Trigger: AGCTTTCCACTCTTGACGCCACTGTCTTTGGACACT...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGGTGGTGGTGGTTGCCTaGATATGGAATTCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKVVVVA*IWNSFA
Trigger: GGCAAAGGAATTCCATATCCAGGCAACCACCACCAC...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCTGGCTGGAGATGTGCTaGTTGTCTGAACACAGGGTG +
Preference number: 4 (lower is better)
Translates to: IFLMISLITSNPGGGRRFWLEMC*LSEHRV
Trigger: CACCCTGTGTTCAGACAACCAGCACATCTCCAGCCA...GAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 72 bp CAAAATGTTGATGCCCAGTTATATGCTGTCAGGCAATaGCCCAAGACTCCAGATAGCAATGTCCATTCATGC +
Preference number: 4 (lower is better)
Translates to: QNVDAQLYAVRQ*PKTPDSNVHSC
Trigger: GCATGAATGGACATTGCTATCTGGAGTCTTGGGCAATTGCCTGACAGCATATAACTGGGCATCAACATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 72 bp CTGAATAAAGGTCAAGCACTTCACAATCACATGCAATaGATCCCTGGACCTGTTAAAGATGGGTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LNKGQALHNHMQ*IPGPVKDGFPE
Trigger: CTCTGGGAACCCATCTTTAACAGGTCCAGGGATCAATTGCATGTGATTGTGAAGTGCTTGACCTTTATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAAAACAGTCCTCCCAAATaGTGCTGCAGCCTCAAACAG +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKNSPPK*CCSLKQ
Trigger: CTGTTTGAGGCTGCAGCATCATTTGGGAGGACTGTT...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAAAGGCTGGACGTCACTTaGACTGTTCGTGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKRLDVT*TVRGLY
Trigger: ATACAGACCACGAACAGTGCAAGTGACGTCCAGCCT...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp ATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAGGCTGGACGTCACTTaGACTGTTCGTGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: IFLMISLITSNPGGGRRFRLDVT*TVRGLY
Trigger: ATACAGACCACGAACAGTGCAAGTGACGTCCAGCCT...GAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR GCA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCTGTGTGTATTTCATCTaGTCAGCTTTTGCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVCVYFI*SAFAGD
Trigger: GTCACCTGCAAAAGCTGAGCAGATGAAATACACACA...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGATTCCTTTCGTTATGTaGCACACAACCCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKIPFVM*HTTHLS
Trigger: GCTGAGGTGGGTTGTGTGCCACATAACGAAAGGAAT...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGAGTGTCCAAAGACAGTaGCGTCAAGAGTGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKSVQRQ*RQEWKA
Trigger: AGCTTTCCACTCTTGACGCCACTGTCTTTGGACACT...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATGTATTGTCATCATCGTaGTGCCACTCTGGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDVLSSS*CHSGQN
Trigger: ATTTTGGCCAGAGTGGCACCACGATGATGACAATAC...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTAAAGACATTACAAGTTaGCAGGCTTCTGCTTATAAA +
Preference number: 4 (lower is better)
Translates to: DEENMPQMFASTPDSSKSKDITS*QASAYK
Trigger: TTTATAAGCAGAAGCCTGCCAACTTGTAATGTCTTT...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCCCTCTCACTGGGCAGTaGCTGAAAACACCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: IFLMISLITSNPGGGRRFPLTGQ*LKTPEK
Trigger: CTTTTCTGGTGTTTTCAGCCACTGCCCAGTGAGAGG...GAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCTCTACTAAAATGTGGTaGGAAAAGGACAACCCATGC +
Preference number: 4 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVSTKMW*EKDNPC
Trigger: GCATGGGTTGTCCTTTTCCCACCACATTTTAGTAGA...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCATTAATCTTGTTGAGTaGGGGTACAGATGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVINLVE*GYRWAK
Trigger: CTTTGCCCATCTGTACCCCCACTCAACAAGATTAAT...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAACCCATGGAGGAGCTATaGAGACAAGGTGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKPMEEL*RQGEQR
Trigger: CCTTTGTTCACCTTGTCTCCATAGCTCCTCCATGGG...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCACTGGATGGCTCCCATaGAGGAGCTATGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTITGWLP*RSYGDK
Trigger: CTTGTCTCCATAGCTCCTCCATGGGAGCCATCCAGT...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATTGCATTTGCATTATCTaGGTATCACCTCACCCCTAC +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDCICII*VSPHPY
Trigger: GTAGGGGTGAGGTGATACCCAGATAATGCAAATGCA...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATAGTTCTAGAAGGGTGTaGAACCAACTGACGTTGAAG +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDSSRRV*NQLTLK
Trigger: CTTCAACGTCAGTTGGTTCCACACCCTTCTAGAACT...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAAGCAAAGGGAAAGCGATaGTGTCCCCATAAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKAKGKR*CPHKRR
Trigger: TCTCCTTTTATGGGGACATCATCGCTTTCCCTTTGC...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAACAAGGCATTTTCCCTTaGGCAGAGAGTTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKQGIFP*AESFPP
Trigger: TGGTGGAAAACTCTCTGCTCAAGGGAAAATGCCTTG...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCACGAATGTTACCACATaGATCCCCACAACACCCCTG +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIITNVTT*IPTTPL
Trigger: CAGGGGTGTTGTGGGGATTCATGTGGTAACATTCGT...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGTACAGAAAGGAATCATaGCAAAGTCCTAAGTGTACC +
Preference number: 4 (lower is better)
Translates to: NLSILVCHGPANSRSFRGYRKES*QSPKCT
Trigger: GGTACACTTAGGACTTTGTCATGATTCCTTTCTGTA...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTCAAGGTGAACAAAGGTaGAAACACCAGACCCTAAGG +
Preference number: 4 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFQGEQR*KHQTLR
Trigger: CCTTAGGGTCTGGTGTTTTCACCTTTGTTCACCTTG...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAATCTAATACCACCAAATaGGGGACTCAGACCCTCAGT +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKSNTTK*GTQTLS
Trigger: ACTGAGGGTCTGAGTCCCTCATTTGGTGGTATTAGA...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGGTACTTCTTATCACCTaGTACGGTAAGTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKVLLIT*YGKSAI
Trigger: GATGGCTGACTTACCGTATCAGGTGATAAGAAGTAC...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538471.1
CDS-3UTR GCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGGGAAAAACTGTTTTCTaGTCCCTCATCTTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: NLSILVCHGPANSRSFRGGKTVF*SLIFKG
Trigger: ACCTTTGAAGATGAGGGAGCAGAAAACAGTTTTTCC...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAAGACTGTGGTGGTGGTTaGCTGGATATGGAATTCCTT +
Preference number: 4 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKDCGGG*LDMEFL
Trigger: AAGGAATTCCATATCCAGGCAACCACCACCACAGTC...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGTATGCCCTACACAATTaGTTAAGTGGTAAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: NLSILVCHGPANSRSFRGYALHN*LSGKQS
Trigger: AGACTGCTTACCACTTAAGCAATTGTGTAGGGCATA...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp ATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCATGCTGTCAGGCAATTaGCCAAGACTCCAGATAGCA +
Preference number: 4 (lower is better)
Translates to: IFLMISLITSNPGGGRRFMLSGN*PRLQIA
Trigger: TGCTATCTGGAGTCTTGGGCAATTGCCTGACAGCAT...GAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCGCAAAGAGAGGTGGATaGAAGAGCTTGATTTACTTT +
Preference number: 4 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVAKRGG*KSLIYF
Trigger: AAAGTAAATCAAGCTCTTGCATCCACCTCTCTTTGC...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGAGTCTAGCAATACCCTaGACTGATGAGAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKSLAIP*TDERSL
Trigger: AAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACT...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCCTATGCTGTTCTATTTaGCACTCTACAACCAGTGTA +
Preference number: 4 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVLCCSI*HSTTSV
Trigger: TACACTGGTTGTAGAGTGGCAAATAGAACAGCATAG...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATTGTTACTTCACTTCCTaGACTGGCCACTTGTATATC +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDCYFTS*TGHLYI
Trigger: GATATACAAGTGGCCAGTGCAGGAAGTGAAGTAACA...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATTACTTCAAATCCTGGTaGAGGAAGGAGGTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDYFKSW*RKEVQE
Trigger: TTCTTGAACCTCCTTCCTCCACCAGGATTTGAAGTA...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCTTGCATAACCCGCCTTaGGAAAGTAAAGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTILHNPP*ESKAGA
Trigger: TGCCCCTGCTTTACTTTCCCAAGGCGGGTTATGCAA...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCTCGTATTATCACTGAAATaGGAAATTAGGGGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KAAIVQLACENSAKHEDLVLSLK*EIRGFS
Trigger: AGAGAACCCCCTAATTTCCCATTTCAGTGATAATAC...GAGATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 72 bp AAATCCTTCCGGATAAAGACTCACACTATGGTGACTTaGTCTTGGTTATTTTGTTTGCATAACCCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: KSFRIKTHTMVT*SWLFCLHNPPW
Trigger: CCAAGGCGGGTTATGCAAACAAAATAACCAAGACAAAGTCACCATAGTGTGAGTCTTTATCCGGAAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCCAGAACATGCCAGGGTaGGTTCAGGCAATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIQNMPG*VQAMKE
Trigger: TTCTTTCATTGCCTGAACTCACCCTGGCATGTTCTG...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAACAAAAGAGGATGCCCTaGAATCAGAGTTCTATGCTG +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKQKRMP*NQSSML
Trigger: CAGCATAGAACTCTGATTTCAGGGCATCCTCTTTTG...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGAAGCGCACTTGGCCCTaGACTCATTTTGATAAATCA +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKKRTWP*THFDKS
Trigger: TGATTTATCAAAATGAGTTCAGGGCCAAGTGCGCTT...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGGGAAGTATTCGTCATTaGGTGTACTTTTATCAGTTC +
Preference number: 4 (lower is better)
Translates to: NLSILVCHGPANSRSFRGGSIRH*VYFYQF
Trigger: GAACTGATAAAAGTACACTCAATGACGAATACTTCC...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATTGGAGTCTAAAAAGATaGAAACCAAACTACAGGTCG +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDWSLKR*KPNYRS
Trigger: CGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCA...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCTTTTGCTGCCTTCGCTaGTCTCCTCAGACTCATAGA +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIIFCCLR*SPQTHR
Trigger: TCTATGAGTCTGAGGAGAGCAGCGAAGGCAGCAAAA...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCAGCAATGTCCATTCATaGCCCTGTAAGAGGTACCTG +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIISNVHS*PCKRYL
Trigger: CAGGTACCTCTTACAGGGGCATGAATGGACATTGCT...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCTTGGTTATTTTGTTTaGATAACCCGCCTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDLGYFV*ITRLGK
Trigger: TTTCCCAAGGCGGGTTATGCAAACAAAATAACCAAG...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCATCGTGGTGCCACTCTaGCCAAAATTTCCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: IFLMISLITSNPGGGRRFIVVPL*PKFPPY
Trigger: ATAAGGAGGAAATTTTGGCCAGAGTGGCACCACGAT...GAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCGGCAACGTAACACTCTaGAGTCAACACAGAACATGC +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIIGNVTL*SQHRTC
Trigger: GCATGTTCTGTGTTGACTCCAGAGTGTTACGTTGCC...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTATAAATGCATGCCAATaGGGGGTGGGAGGTGAATTA +
Preference number: 4 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFINACQ*GVGGEL
Trigger: TAATTCACCTCCCACCCCCCATTGGCATGCATTTAT...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAATCAATTACAGGCATCTaGGTGCTACGCCTAAAGACT +
Preference number: 4 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKSITGI*VLRLKT
Trigger: AGTCTTTAGGCGTAGCACCCAGATGCCTGTAATTGA...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATATTAGCCCCGAAATGTaGGTTCAAATTATGCCAACA +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDISPEM*VQIMPT
Trigger: TGTTGGCATAATTTGAACCCACATTTCGGGGCTAAT...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAAAAAAGCAGGAGAGGATaGGACAGCATATTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKKSRRG*DSIFQR
Trigger: TCTCTGGAATATGCTGTCCCATCCTCTCCTGCTTTT...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCGAGAGAGAACGGGGATaGGACAGCAAAAACATTAAG +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIERERG*DSKNIK
Trigger: CTTAATGTTTTTGCTGTCTCATCCCCGTTCTCTCTC...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGACAAGGGAATCCTTTTaGACTTCCCAAGTTATATCC +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKTRESF*TSQVIS
Trigger: GGATATAACTTGGGAAGTTCAAAAGGATTCCCTTGT...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp ATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCGCTGTCATCAACATTTaGGTTGTCAGACATTTGGCA +
Preference number: 4 (lower is better)
Translates to: IFLMISLITSNPGGGRRFAVINI*VVRHLA
Trigger: TGCCAAATGTCTGACAACTCAAATGTTGATGACAGC...GAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTCTGACCCTAAAGACTTaGGCATATCATGGCCATATT +
Preference number: 4 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFLTLKT*AYHGHI
Trigger: AATATGGCCATGATATGCTCAAGTCTTTAGGGTCAG...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGTTAGAGTCAATCTCTTaGTGTTTCCTAATGACCAGG +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKLESIS*CFLMTR
Trigger: CCTGGTCATTAGGAAACAGCAAGAGATTGACTCTAA...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATATTCCCAGTTACATATaGCCTACACAATTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDIPSYI*PTQLLK
Trigger: CTTAAGCAATTGTGTAGGGCATATGTAACTGGGAAT...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCCAGGCACAGGGTAGGTaGTCTGTAAATATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIIQAQGR*SVNIQQ
Trigger: TTGCTGAATATTTACAGAGCACCTACCCTGTGCCTG...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCCCTCAGACTCATAGATaGTATTGTCATCATCGTGGT +
Preference number: 4 (lower is better)
Translates to: IFLMISLITSNPGGGRRFPQTHR*YCHHRG
Trigger: ACCACGATGATGACAATACCATCTATGAGTCTGAGG...GAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCCTGTTTGTTTTCAATaGAGTCATCTGAATGGTTCT +
Preference number: 4 (lower is better)
Translates to: NKAAIVQLACENSAKHEDPVCFQ*SHLNGS
Trigger: AGAACCATTCAGATGACTCCATTGAAAACAAACAGG...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp ATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCCATTACTTCAAATCCTaGTGGAGGAAGGAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: IFLMISLITSNPGGGRRFHYFKS*WRKEVQ
Trigger: TTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATG...GAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAATCCATTTGTAGTGGATaGAATGGAACAGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKSICSG*NGTGKW
Trigger: CCATTTCCCTGTTCCATTCCATCCACTACAAATGGA...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGAAAAATCTGAGTTTCTaGGTAAGGAATTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: NLSILVCHGPANSRSFRGKNLSF*VRNSDE
Trigger: CTCATCTGAATTCCTTACCCAGAAACTCAGATTTTT...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGTCTGATTCTGAACAATaGAAGAGGAAAGTCATTGAT +
Preference number: 4 (lower is better)
Translates to: NLSILVCHGPANSRSFRGSDSEQ*KRKVID
Trigger: ATCAATGACTTTCCTCTTCCATTGTTCAGAATCAGA...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTGAGTTGTCAGACATTTaGCATGATGTAGATCACTGG +
Preference number: 4 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFELSDI*HDVDHW
Trigger: CCAGTGATCTACATCATGCCAAATGTCTGACAACTC...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAAATGCCATCTTCACATTaGGGTCATCATTCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKMPSSH*GHHSAR
Trigger: TCTTGCTGAATGATGACCCCAATGTGAAGATGGCAT...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 72 bp TCTAGGGCTCTAAATCAAATTAACACCTACAAAATGTaGATGCCCAGTTATATGCTGTCAGGCAATTGCCCA +
Preference number: 4 (lower is better)
Translates to: SRALNQINTYKM*MPSYMLSGNCP
Trigger: TGGGCAATTGCCTGACAGCATATAACTGGGCATCAACATTTTGTAGGTGTTAATTTGATTTAGAGCCCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTATAAAAACTATCAGCTaGCAACCAGCTCTTACACCT +
Preference number: 4 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFIKTIS*QPALTP
Trigger: AGGTGTAAGAGCTGGTTGTCAGCTGATAGTTTTTAT...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGGGTACCTGGATGGAATaGCTTATTTTACAACTTCAT +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKGTWME*LILQLH
Trigger: ATGAAGTTGTAAAATAAGTCATTCCATCCAGGTACC...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGTCCAGAAATAAACACTaGAATGCCATCTTCACATTG +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKSRNKH*NAIFTL
Trigger: CAATGTGAAGATGGCATTTCAGTGTTTATTTCTGGA...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTTGCACCCTGCCTAATTaGGACAATATTTATACAAGG +
Preference number: 4 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFCTLPN*DNIYTR
Trigger: CCTTGTATAAATATTGTCTCAATTAGGCAGGGTGCA...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGAATCAGTATTATCACTaGAATGGGAAATTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKNQYYH*NGKLGG
Trigger: ACCCCCTAATTTCCCATTTCAGTGATAATACTGATT...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp ATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCGGAAAAACTGTTTTCTaGTCCCTCATCTTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: IFLMISLITSNPGGGRRFGKTVF*SLIFKG
Trigger: ACCTTTGAAGATGAGGGAGCAGAAAACAGTTTTTCC...GAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR GCA 90 bp ATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCACCAGCTCTTACACCTaGTCTACCACACAATATTAT +
Preference number: 4 (lower is better)
Translates to: IFLMISLITSNPGGGRRFTSSYT*STTQYY
Trigger: ATAATATTGTGTGGTAGAGCAGGTGTAAGAGCTGGT...GAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR GCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCGCTAATCATTGTGATTaGAAAACAGAGGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIIANHCD*KTEGAG
Trigger: ACCTGCACCCTCTGTTTTGCAATCACAATGATTAGC...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCGAGAACAAAGGATCCTaGGTCATAGTCAGGAACAAT +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIENKGS*VIVRNN
Trigger: ATTGTTCCTGACTATGACCCAGGATCCTTTGTTCTC...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCTCTTCTCTCTACCAGTaGTTCTCACACTTCGTAACA +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTISSLYQ*FSHFVT
Trigger: TGTTACGAAGTGTGAGAACCACTGGTAGAGAGAAGA...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAAAGTATGTCTGTTCCTTaGACCTTAGCTATTTCACAA +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKSMSVP*TLAISQ
Trigger: TTGTGAAATAGCTAAGGTTCAAGGAACAGACATACT...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTACAATAAGCTTGTTCTaGTCCCACAAGACTTATTAC +
Preference number: 4 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFTISLF*SHKTYY
Trigger: GTAATAAGTCTTGTGGGATCAGAACAAGCTTATTGT...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGCTGTATTTTAAGAAGTaGCTCTTTAACCCCATAATG +
Preference number: 4 (lower is better)
Translates to: FLMISLITSNPGGGRRFKLYFKK*LFNPIM
Trigger: CATTATGGGGTTAAAGAGGCACTTCTTAAAATACAG...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAACTCAGTTTTTGGTCCTaGCCTTCAAATAAGTATGTA +
Preference number: 4 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKLSFWS*PSNKYV
Trigger: TACATACTTATTTGAAGGGCAGGACCAAAAACTGAG...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCTTTGGGAATCCATCTTaGTATTCTTCAGAGTCTAGC +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIFGNPS*YSSESS
Trigger: GCTAGACTCTGAAGAATAGCAAGATGGATTCCCAAA...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTGAAATCAGAGTTCTATaGTGTTCTATTTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFEIRVL*CSICHS
Trigger: AGAGTGGCAAATAGAACAGCATAGAACTCTGATTTC...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCACGATCTGGGCTGTCTaGAAACATTTAAAAGACTTC +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIITIWAV*KHLKDF
Trigger: GAAGTCTTTTAAATGTTTGCAGACAGCCCAGATCGT...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAAACAGACAATACATCCTaGATTTGCATTATCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKTDNTS*ICIIWV
Trigger: TACCCAGATAATGCAAATGCAGGATGTATTGTCTGT...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAAAAATTATGCCAACATTaGCCCTTCCTATCTCAGATA +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKKLCQH*PFLSQI
Trigger: TATCTGAGATAGGAAGGGCCAATGTTGGCATAATTT...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCTCCTTATATCTGTTCTaGTGGAGAGTAAAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTISLYLF*WRVKLN
Trigger: ATTGAGCTTTACTCTCCATCAGAACAGATATAAGGA...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR TCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCAGGCAATCATCCTTATaGAATTTGAGCATCCTAGTT +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIRQSSL*NLSILV
Trigger: AACTAGGATGCTCAAATTTCATAAGGATGATTGCCT...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAACAACTCTATGAAACCTaGCATATACCTGAGATTTAT +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKQLYET*HIPEIY
Trigger: ATAAATCTCAGGTATATGGCAGGTTTCATAGAGTTG...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAAAAAATCATGCGTCCATaGCTGTTTTATATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: REMESKKMKTKLQVEHPKKIMRP*LFYICF
Trigger: AAAGCAGATATAAAACAGGCATGGACGCATGATTTT...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCCTTGACCTAAAATCATaGGTCCATGCCTGTTTTATA +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIILDLKS*VHACFI
Trigger: TATAAAACAGGCATGGACGCATGATTTTAGGTCAAG...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCAATACATCCTGCATTTaGATTATCTGGGTATCACCT +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIINTSCI*IIWVSP
Trigger: AGGTGATACCCAGATAATGCAAATGCAGGATGTATT...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR GCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCGAATTTCCAAAATCTTaGTGTGAATCTCTGACCCTA +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIIEFPKS*CESLTL
Trigger: TAGGGTCAGAGATTCACAGCAAGATTTTGGAAATTC...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CCA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCCCTGTTTGTTTTCAATaGAGTCATCTGAATGGTTCT +
Preference number: 4 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIPVCFQ*SHLNGS
Trigger: AGAACCATTCAGATGACTCCATTGAAAACAAACAGG...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CCA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCTTATATCCAGACCACTaGAAGCAACTGAATAAAGGT +
Preference number: 4 (lower is better)
Translates to: KTLLVPSTSDKRYSISIILYPDH*KQLNKG
Trigger: ACCTTTATTCAGTTGCTTCCAGTGGTCTGGATATAA...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
3UTR CAA 72 bp CTAAAATCATGCGTCCATGCCTGTTTTATATCTGCTTaGCCACAAATGGTATATACACATTCTCTAATCAAT +
Preference number: 4 (lower is better)
Translates to: LKSCVHACFISA*PQMVYTHSLIN
Trigger: ATTGATTAGAGAATGTGTATATACCATTTGTGGCAAAGCAGATATAAAACAGGCATGGACGCATGATTTTAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS GCA 90 bp AGGAGAAGGGCTCCTCGGACCCGGCCCACCAGCCGAAGAAGGAGATaGTCTGGTTCCAGCTCAGATCCACCACGCACGGCCTGGACGAAG +
Preference number: 5 (lower is better)
Translates to: RRRAPRTRPTSRRRR*SGSSSDPPRTAWTK
Trigger: CTTCGTCCAGGCCGTGCGTGGTGGATCTGAGCTGGAACCAGAGCATCTCCTTCTTCGGCTGGTGGGCCGGGTCCGAGGAGCCCTTCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS CCA 90 bp AAGGGCTCCTCGGACCCGGCCCACCAGCCGAAGAAGGAGATGCTCTaGTTCCAGCTCAGATCCACCACGCACGGCCTGGACGAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: KGSSDPAHQPKKEML*FQLRSTTHGLDEAK
Trigger: CTTTGCTTCGTCCAGGCCGTGCGTGGTGGATCTGAGCTGGAACCAGAGCATCTCCTTCTTCGGCTGGTGGGCCGGGTCCGAGGAGCCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS TCA 90 bp AATGGACCGACCCAGGGAGTGGCAGGTCCCAAGGAAGAGGGTCAGTaGGGCTGGACGTCACTTGCACTGTTCGTGGTCTGTATAGTCATC +
Preference number: 5 (lower is better)
Translates to: NGPTQGVAGPKEEGQ*GWTSLALFVVCIVI
Trigger: GATGACTATACAGACCACGAACAGTGCAAGTGACGTCCAGCCTCACTGACCCTCTTCCTTGGGACCTGCCACTCCCTGGGTCGGTCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389677.6
ENST00000461803.1
ENST00000538471.1
CDS-3UTR CAA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGATGCTCCTCCACCATCTaGGTCACCGCTCTGGAGATG +
Preference number: 5 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGCSSTI*VTALEM
Trigger: CATCTCCAGAGCGGTGACCAAGATGGTGGAGGAGCA...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS GCA 90 bp GGTCAAGTAAAGGGTTTTCTTCCACCAGGGATCGGAGCCCAGCCCTaGCATGATCCCACCGTAATCCTGCAAAGGGAAAGCGATGATGTC +
Preference number: 5 (lower is better)
Translates to: GQVKGFLPPGIGAQP*HDPTVILQRESDDV
Trigger: GACATCATCGCTTTCCCTTTGCAGGATTACGGTGGGATCATGGCAGGGCTGGGCTCCGATCCCTGGTGGAAGAAAACCCTTTACTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGCTGGGGACAAGTTCCTaGCTTCGGCGAAAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQLGTSS*LRRKQN
Trigger: ATTCTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAG...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS CCA 90 bp GGGTGTGGGTTTTGCTGCCTTCGCTGCTCTCCTCAGACTCATAGATaGTATTGTCATCATCGTGGTGCCACTCTGGCCAAAATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GCGFCCLRCSPQTHR*YCHHRGATLAKISS
Trigger: GGAGGAAATTTTGGCCAGAGTGGCACCACGATGATGACAATACCATCTATGAGTCTGAGGAGAGCAGCGAAGGCAGCAAAACCCACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389677.6
ENST00000461803.1
ENST00000538471.1
CDS-3UTR CAA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGTAAGGTCCACATaGCCTGTGCCAAGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: CENSAKHEDLLPARMDCYLVRST*PVPSVQ
Trigger: TTGGACACTTGGCACAGGCAATGTGGACCTTACCAG...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CAA 90 bp AAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCTCTCAGCCGTTCGGGTCTaGTCCCTGGTAAGGTCCACA +
Preference number: 5 (lower is better)
Translates to: KAAIVQLACENSAKHEDLSAVRV*SLVRST
Trigger: TGTGGACCTTACCAGGGACAAGACCCGAACGGCTGA...GAGATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CAA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATAGCGGGGTGTGGGTTTaGCTGCCTTCGCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: NKAAIVQLACENSAKHEDSGVWV*LPSLLS
Trigger: GGAGAGCAGCGAAGGCAGCAAAACCCACACCCCGCT...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS CCA 90 bp ACTGGCAATAAGCTAATGTCCAGTAGAAGTGCTCCTCCACCATCTTaGTCACCGCTCTGGAGATGGCTCTTTCATGAGGGCCAAGGTTTT +
Preference number: 5 (lower is better)
Translates to: TGNKLMSSRSAPPPS*SPLWRWLFHEGQGF
Trigger: AAAACCTTGGCCCTCATGAAAGAGCCATCTCCAGAGCGGTGACCAAGATGGTGGAGGAGCACTTCTACTGGACATTAGCTTATTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000480148.1
CDS-3UTR CAA 90 bp TGTGAAAACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCAGTACATGGCAAGGTaGATCAGCTCACCTTTGATC +
Preference number: 5 (lower is better)
Translates to: CENSAKHEDLLPARMDCYQYMAR*ISSPLI
Trigger: GATCAAAGGTGAGCTGATCAACCTTGCCATGTACTG...GTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTTTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CAA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGATTCTGCTCATTAATCTaGTTGAGTGGGGGTACAGAT +
Preference number: 5 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGFCSLI*LSGGTD
Trigger: ATCTGTACCCCCACTCAACAAGATTAATGAGCAGAA...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCTTCAGCCCAGGCTGGTaGCCCTATCCATGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVFSPGW*PYPCRS
Trigger: GCTTCTGCATGGATAGGGCAACCAGCCTGGGCTGAA...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGCGCTGTCATCAACATTaGAGTTGTCAGACATTTGGC +
Preference number: 5 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQRCHQH*SCQTFG
Trigger: GCCAAATGTCTGACAACTCAAATGTTGATGACAGCG...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCTCTCCGCCCCGCTCTTaGTGTCGGCGCCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTISPPRS*CRRLEK
Trigger: CTTCTCCAGGCGCCGACACAAAGAGCGGGGCGGAGA...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTCAGAAATGCCACCAGTaGGCCTTAAAACACACTTGC +
Preference number: 5 (lower is better)
Translates to: DEENMPQMFASTPDSSKSQKCHQ*ALKHTC
Trigger: GCAAGTGTGTTTTAAGGCCAACTGGTGGCATTTCTG...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGAAACACCTACAAAATGTaGATGCCCAGTTATATGCTG +
Preference number: 5 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGNTYKM*MPSYML
Trigger: CAGCATATAACTGGGCATCAACATTTTGTAGGTGTT...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGAGGAGTCTTGGTGATTaGGGAATCCATCTTGCTATT +
Preference number: 5 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQRSLGD*GIHLAI
Trigger: AATAGCAAGATGGATTCCCAAATCACCAAGACTCCT...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGTCTATGCTGTTCTATTaGCCACTCTACAACCAGTGT +
Preference number: 5 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQSMLFY*PLYNQC
Trigger: ACACTGGTTGTAGAGTGGCAAATAGAACAGCATAGA...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGTCTGACCCTAAAGACTaGAGCATATCATGGCCATAT +
Preference number: 5 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQSDPKD*SISWPY
Trigger: ATATGGCCATGATATGCTCAAGTCTTTAGGGTCAGA...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp AACTCTGCCAAGCACGAAGATCTCCTCCCAGCTCGGATGGATTGCTACCTGGGACAAAGGAAACGGACATaGGATCATTTCAGATTTCCA +
Preference number: 5 (lower is better)
Translates to: NSAKHEDLLPARMDCYLGQRKRT*DHFRFP
Trigger: TGGAAATCTGAAATGATCCAATGTCCGTTTCCTTTG...TCCCAGGTAGCAATCCATCCGAGCTGGGAGGAGATCTTCGTGCTTGGCAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS CCA 90 bp TCCAGTAGAAGTGCTCCTCCACCATCTTGGTCACCGCTCTGGAGATaGCTCTTTCATGAGGGCCAAGGTTTTTGTTTAAATTCACTCCAA +
Preference number: 5 (lower is better)
Translates to: SSRSAPPPSWSPLWR*LFHEGQGFCLNSLQ
Trigger: TTGGAGTGAATTTAAACAAAAACCTTGGCCCTCATGAAAGAGCCATCTCCAGAGCGGTGACCAAGATGGTGGAGGAGCACTTCTACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000480148.1
CDS-3UTR CAA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCAGCGGGGTGTGGGTTTaGCTGCCTTCGCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: KTLLVPSTSDKRYSISIISGVWV*LPSLLS
Trigger: GGAGAGCAGCGAAGGCAGCAAAACCCACACCCCGCT...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp AAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCTCTATGCTGTCAGGCAATaGCCCAAGACTCCAGATAGC +
Preference number: 5 (lower is better)
Translates to: KAAIVQLACENSAKHEDLYAVRQ*PKTPDS
Trigger: GCTATCTGGAGTCTTGGGCAATTGCCTGACAGCATA...GAGATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTACTGAAATGGTCAGTTaGGTGCTGCTAGACCATATC +
Preference number: 5 (lower is better)
Translates to: DEENMPQMFASTPDSSKSTEMVS*VLLDHI
Trigger: GATATGGTCTAGCAGCACCAAACTGACCATTTCAGT...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS CCA 90 bp CTAATGTCCAGTAGAAGTGCTCCTCCACCATCTTGGTCACCGCTCTaGAGATGGCTCTTTCATGAGGGCCAAGGTTTTTGTTTAAATTCA +
Preference number: 5 (lower is better)
Translates to: LMSSRSAPPPSWSPL*RWLFHEGQGFCLNS
Trigger: TGAATTTAAACAAAAACCTTGGCCCTCATGAAAGAGCCATCTCCAGAGCGGTGACCAAGATGGTGGAGGAGCACTTCTACTGGACATTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000480148.1
CDS-3UTR CAA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAATCAGCCGTTCGGGTCTaGTCCCTGGTAAGGTCCACA +
Preference number: 5 (lower is better)
Translates to: REMESKKMKTKLQVEHPKSAVRV*SLVRST
Trigger: TGTGGACCTTACCAGGGACAAGACCCGAACGGCTGA...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTGGATATGGAATTCCTTaGCCCTCAAATCTTCACATG +
Preference number: 5 (lower is better)
Translates to: DEENMPQMFASTPDSSKSGYGIP*PSNLHM
Trigger: CATGTGAAGATTTGAGGGCAAAGGAATTCCATATCC...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGATGGGCAGGGCTCACTaGAGGAGTAGACTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: FLMISLITSNPGGGRRFKMGRAH*RSRLQS
Trigger: AGACTGCAGTCTACTCCTCAAGTGAGCCCTGCCCAT...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGGGGAAGTATTCGTCATaGAGTGTACTTTTATCAGTT +
Preference number: 5 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQGKYSS*SVLLSV
Trigger: AACTGATAAAAGTACACTCAATGACGAATACTTCCC...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGGCGAAAGCAGAATGGTaGAGGAGGTCACCCTGTCAG +
Preference number: 5 (lower is better)
Translates to: FLMISLITSNPGGGRRFKAKAEW*RRSPCQ
Trigger: CTGACAGGGTGACCTCCTCAACCATTCTGCTTTCGC...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp GGAGTTTTAGAGGGTCTAGGTCTGGGGACAAGTTCCTTGCTTCGGCGAAAGCAGAGCCATACCACATGGTaGCTTGAAATTTTGACATTT +
Preference number: 5 (lower is better)
Translates to: GVLEGLGLGTSSLLRRKQSHTTW*LEILTF
Trigger: AAATGTCAAAATTTCAAGCAACCATGTGGTATGGCT...CTGCTTTCGCCGAAGCAAGGAACTTGTCCCCAGACCTAGACCCTCTAAAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp AATTTGAGCATCCTAGTTTGTCATGGTCCAGCCAATAGCAGGAGTTTTAGAGGGCAGTACATGGCAAGGTaGATCAGCTCACCTTTGATC +
Preference number: 5 (lower is better)
Translates to: NLSILVCHGPANSRSFRGQYMAR*ISSPLI
Trigger: GATCAAAGGTGAGCTGATCAACCTTGCCATGTACTG...CCCTCTAAAACTCCTGCTATTGGCTGGACCATGACAAACTAGGATGCTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTGAGGCTGGACGTCACTaGCACTGTTCGTGGTCTGTA +
Preference number: 5 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFEAGRH*HCSWSV
Trigger: TACAGACCACGAACAGTGCAAGTGACGTCCAGCCTC...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGAGGACAACCCATGCTTaGTGGAGACAGGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: FLMISLITSNPGGGRRFKRTTHA*WRQVCS
Trigger: ACTGCAGACCTGTCTCCACAAAGCATGGGTTGTCCT...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTATGGAAAGAACCATATaGACCTCAGTTTTTGGTCCT +
Preference number: 5 (lower is better)
Translates to: DEENMPQMFASTPDSSKSMERTI*TSVFGP
Trigger: AGGACCAAAAACTGAGGTCAATATGGTTCTTTCCAT...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATGAGAGGTCTCTTGTATaGGTCTTGACCAGGCTGACA +
Preference number: 5 (lower is better)
Translates to: NKAAIVQLACENSAKHEDERSLV*VLTRLT
Trigger: TGTCAGCCTGGTCAAGACCAATACAAGAGACCTCTC...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp AGTAAACATGTCACCCCTACTGAAGCAGAAGCCTTTAGCCTTATTTCTGTAAAACTGGCAAGGCTAACGTaGCTGGTTCCAGCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: SKHVTPTEAEAFSLISVKLARLT*LVPAVS
Trigger: TGAGACTGCTGGAACCAGCAACGTTAGCCTTGCCAG...TTTTACAGAAATAAGGCTAAAGGCTTCTGCTTCAGTAGGGGTGACATGTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCTCCTGCACTGGCCACTaGTATATCCATAGACAATCC +
Preference number: 5 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVSCTGH*YIHRQS
Trigger: GGATTGTCTATGGATATACAAGTGGCCAGTGCAGGA...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGTCAAGAGTGGAAAGCTaGGGCCCCATGATGTACTTC +
Preference number: 5 (lower is better)
Translates to: FLMISLITSNPGGGRRFKSRVES*GPMMYF
Trigger: GAAGTACATCATGGGGCCCAAGCTTTCCACTCTTGA...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CAA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCGAGGCTGGACGTCACTaGCACTGTTCGTGGTCTGTA +
Preference number: 5 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIEAGRH*HCSWSV
Trigger: TACAGACCACGAACAGTGCAAGTGACGTCCAGCCTC...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CAA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGGGTAGGTGGAGAGTATaGTCATCCCCACTTTACAGG +
Preference number: 5 (lower is better)
Translates to: FLMISLITSNPGGGRRFKGRWRV*SSPLYR
Trigger: CCTGTAAAGTGGGGATGACAATACTCTCCACCTACC...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCACTGCACAGAGTGCTTaGATACAAGTATCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVTAQSA*IQVSSC
Trigger: GCAAGAGGATACTTGTATCAAAGCACTCTGTGCAGT...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTCACCTGTTCATGAAATaGGAGAACATTTCAAATCTG +
Preference number: 5 (lower is better)
Translates to: DEENMPQMFASTPDSSKSHLFMK*ENISNL
Trigger: CAGATTTGAAATGTTCTCCAATTTCATGAACAGGTG...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAACTGGAGATGTGCTGGTaGTCTGAACACAGGGTGACT +
Preference number: 5 (lower is better)
Translates to: REMESKKMKTKLQVEHPKLEMCW*SEHRVT
Trigger: AGTCACCCTGTGTTCAGACAACCAGCACATCTCCAG...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp GATGAGGAAAACATGCCACAGATGTTCGCATCCACGCCTGACAGTAGCAAGAGTAACAAGGGAATCCTTTaGAACTTCCCAAGTTATATC +
Preference number: 5 (lower is better)
Translates to: DEENMPQMFASTPDSSKSNKGIL*NFPSYI
Trigger: GATATAACTTGGGAAGTTCAAAAGGATTCCCTTGTT...ACTCTTGCTACTGTCAGGCGTGGATGCGAACATCTGTGGCATGTTTTCCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCATCTTCCGGGTCTCATaGAGATTGTCCACCCACTGG +
Preference number: 5 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIIFRVS*RLSTHW
Trigger: CCAGTGGGTGGACAATCTCAATGAGACCCGGAAGAT...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCCTGGTAAGGTCCACATaGCCTGTGCCAAGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTILVRST*PVPSVQ
Trigger: TTGGACACTTGGCACAGGCAATGTGGACCTTACCAG...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CAA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAATTGATCAGCTCACCTTaGATCAGCCGTTCGGGTCTT +
Preference number: 5 (lower is better)
Translates to: REMESKKMKTKLQVEHPKLISSP*ISRSGL
Trigger: AAGACCCGAACGGCTGATCAAAGGTGAGCTGATCAA...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCAAGGAAACACAGAACTaGAACAAGAAGCCAGATGAC +
Preference number: 5 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVKETQN*NKKPDD
Trigger: GTCATCTGGCTTCTTGTTCAAGTTCTGTGTTTCCTT...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp ATTCTTCAGAGTCTAGCAATACCCTGCACTGATGAGAGGTCTCTTGTATTGGTCGGCCCTGAACTCATTTaGATAAATCAATTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: ILQSLAIPCTDERSLVLVGPELI*INQFWG
Trigger: CCCCCAAAATTGATTTATCAAAATGAGTTCAGGGCC...GACCAATACAAGAGACCTCTCATCAGTGCAGGGTATTGCTAGACTCTGAAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp AAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATCTCCCCTACTTTCTTTTCTaGTTTTGCTTACCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: KAAIVQLACENSAKHEDLPYFLF*FCLPQC
Trigger: ACACTGAGGTAAGCAAAACAAGAAAAGAAAGTAGGG...GAGATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCTTGATCAGCTCACCTTaGATCAGCCGTTCGGGTCTT +
Preference number: 5 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTILISSP*ISRSGL
Trigger: AAGACCCGAACGGCTGATCAAAGGTGAGCTGATCAA...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CAA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAATCTCTTGTATTGGTCTaGACCAGGCTGACAGGACAT +
Preference number: 5 (lower is better)
Translates to: REMESKKMKTKLQVEHPKSLVLV*TRLTGH
Trigger: ATGTCCTGTCAGCCTGGTCAAGACCAATACAAGAGA...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp AGAGAAATGGAGTCTAAAAAGATGAAAACCAAACTACAGGTCGAGCATCCCAAAACGCCTAAAGACTCCTaGTCCCATTCTCTAAACTCC +
Preference number: 5 (lower is better)
Translates to: REMESKKMKTKLQVEHPKTPKDS*SHSLNS
Trigger: GGAGTTTAGAGAATGGGACAAGGAGTCTTTAGGCGT...TTTGGGATGCTCGACCTGTAGTTTGGTTTTCATCTTTTTAGACTCCATTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATTTTAGAGTCAATCTCTaGCTGTTTCCTAATGACCAG +
Preference number: 5 (lower is better)
Translates to: NKAAIVQLACENSAKHEDFRVNL*LFPNDQ
Trigger: CTGGTCATTAGGAAACAGCAAGAGATTGACTCTAAA...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp AAAACACTTCTGGTCCCAAGCACTTCAGATAAGAGATACTCAATCAGTATTATCTGCTCATTAATCTTGTaGAGTGGGGGTACAGATGGG +
Preference number: 5 (lower is better)
Translates to: KTLLVPSTSDKRYSISIICSLIL*SGGTDG
Trigger: CCCATCTGTACCCCCACTCAACAAGATTAATGAGCA...GATAATACTGATTGAGTATCTCTTATCTGAAGTGCTTGGGACCAGAAGTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGCACAATCACATGCAATaGATCCCTGGACCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: FLMISLITSNPGGGRRFKHNHMQ*IPGPVK
Trigger: TTTAACAGGTCCAGGGATCAATTGCATGTGATTGTG...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp AATAAGGCTGCTATAGTCCAGTTAGCATGTGAAAACTCTGCCAAGCACGAAGATAAAGGTGACATCAAATaGTTCATCCTTCTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: NKAAIVQLACENSAKHEDKGDIK*FILLFP
Trigger: GGGAAAGAGAAGGATGAACAATTTGATGTCACCTTT...ATCTTCGTGCTTGGCAGAGTTTTCACATGCTAACTGGACTATAGCAGCCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGCAAATTATGCCAACATaGGCCCTTCCTATCTCAGAT +
Preference number: 5 (lower is better)
Translates to: FLMISLITSNPGGGRRFKQIMPT*ALPISD
Trigger: ATCTGAGATAGGAAGGGCCAATGTTGGCATAATTTG...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp ATTTTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCTCTTGGTTATTTTGTTaGCATAACCCGCCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: IFLMISLITSNPGGGRRFSWLFC*HNPPWE
Trigger: TTCCCAAGGCGGGTTATGCAAACAAAATAACCAAGA...GAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp TTTCTGATGATATCTCTCATTACTTCAAATCCTGGTGGAGGAAGGAGGTTCAAGATTAAGACCTCAGGGTaGAAGAGGATCATCATAAAA +
Preference number: 5 (lower is better)
Translates to: FLMISLITSNPGGGRRFKIKTSG*KRIIIK
Trigger: TTTTATGATGATCCTCTTCAACCCTGAGGTCTTAAT...CTTGAACCTCCTTCCTCCACCAGGATTTGAAGTAATGAGAGATATCATCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS-3UTR CAA 90 bp ATCCATCTCACAATTAAGACCTCAGGGTTGAAGAGGATCATCATAAAAACTATCGTCCTAAGTGTACCTTaGTGTGTATTTCATCTGCTC +
Preference number: 5 (lower is better)
Translates to: IHLTIKTSGLKRIIIKTIVLSVP*CVFHLL
Trigger: GAGCAGATGAAATACACACAAAGGTACACTTAGGAC...GATAGTTTTTATGATGATCCTCTTCAACCCTGAGGTCTTAATTGTGAGATGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS-3UTR CAA 90 bp CTCTTTAACCCCATAATGAGCAATCCTTATGTTGGTCAGAAGCAAAGCAGTTTTATTAAGACCTCAGGGTaGAAGAGGATCATCATAAAA +
Preference number: 5 (lower is better)
Translates to: LFNPIMSNPYVGQKQSSFIKTSG*KRIIIK
Trigger: TTTTATGATGATCCTCTTCAACCCTGAGGTCTTAAT...AAAACTGCTTTGCTTCTGACCAACATAAGGATTGCTCATTATGGGGTTAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS TCA 90 bp CAGAAAGGAGATAAACTTGGAACACCATTGTTAGGTCTTGCAAACTaGTGCAAAATAATAGCATCTTTAGAGTCAATCTCTTGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: QKGDKLGTPLLGLAN*CKIIASLESISCCF
Trigger: GAAACAGCAAGAGATTGACTCTAAAGATGCTATTATTTTGCATCAGTTTGCAAGACCTAACAATGGTGTTCCAAGTTTATCTCCTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000480148.1
CDS GCA 72 bp GCTCCTCGGACCCGGCCCACCAGCCGAAGAAGGAGATaGTCTGGTTCCAGCTCAGATCCACCACGCACGGCC +
Preference number: 6 (lower is better)
Translates to: APRTRPTSRRRR*SGSSSDPPRTA
Trigger: GGCCGTGCGTGGTGGATCTGAGCTGGAACCAGAGCATCTCCTTCTTCGGCTGGTGGGCCGGGTCCGAGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS TCA 72 bp TTTTCTTCCACCAGGGATCGGAGCCCAGCCCTGCCATaGTCCCACCGTAATCCTGGGGCGGCGCGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: FSSTRDRSPALP*SHRNPGAARSC
Trigger: GCAGCTCCGCGCCGCCCCAGGATTACGGTGGGATCATGGCAGGGCTGGGCTCCGATCCCTGGTGGAAGAAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480148.1
CDS CCA 72 bp TCGGACCCGGCCCACCAGCCGAAGAAGGAGATGCTCTaGTTCCAGCTCAGATCCACCACGCACGGCCTGGAC +
Preference number: 6 (lower is better)
Translates to: SDPAHQPKKEML*FQLRSTTHGLD
Trigger: GTCCAGGCCGTGCGTGGTGGATCTGAGCTGGAACCAGAGCATCTCCTTCTTCGGCTGGTGGGCCGGGTCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS GCA 72 bp AAGGGTTTTCTTCCACCAGGGATCGGAGCCCAGCCCTaGCATGATCCCACCGTAATCCTGGGGCGGCGCGGA +
Preference number: 6 (lower is better)
Translates to: KGFLPPGIGAQP*HDPTVILGRRG
Trigger: TCCGCGCCGCCCCAGGATTACGGTGGGATCATGGCAGGGCTGGGCTCCGATCCCTGGTGGAAGAAAACCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480148.1
CDS TCA 72 bp ACCCAGGGAGTGGCAGGTCCCAAGGAAGAGGGTCAGTaGGGCTGGACGTCACTTGCACTGTTCGTGGTCTGT +
Preference number: 6 (lower is better)
Translates to: TQGVAGPKEEGQ*GWTSLALFVVC
Trigger: ACAGACCACGAACAGTGCAAGTGACGTCCAGCCTCACTGACCCTCTTCCTTGGGACCTGCCACTCCCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389677.6
ENST00000461803.1
ENST00000538471.1
CDS GCA 72 bp CCTAATGACCAGGAGTTCGTGGAGCAGATACGCAGCTaGGGCCAGCAAAGCTCCCCCGGTCAAGTAAAGGGT +
Preference number: 6 (lower is better)
Translates to: PNDQEFVEQIRS*GQQSSPGQVKG
Trigger: ACCCTTTACTTGACCGGGGGAGCTTTGCTGGCCGCAGCTGCGTATCTGCTCCACGAACTCCTGGTCATTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000480148.1
CDS GCA 72 bp AAGGGTTTTCTTCCACCAGGGATCGGAGCCCAGCCCTaGCATGATCCCACCGTAATCCTGCAAAGGGAAAGC +
Preference number: 6 (lower is better)
Translates to: KGFLPPGIGAQP*HDPTVILQRES
Trigger: GCTTTCCCTTTGCAGGATTACGGTGGGATCATGGCAGGGCTGGGCTCCGATCCCTGGTGGAAGAAAACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS CAA 72 bp TCAGCCGTTCGGGTCTTGTCCCTGGTAAGGTCCACATaGCCTGTGCCAAGTGTCCAAAGACAGTGGCGTCAA +
Preference number: 6 (lower is better)
Translates to: SAVRVLSLVRST*PVPSVQRQWRQ
Trigger: TTGACGCCACTGTCTTTGGACACTTGGCACAGGCAATGTGGACCTTACCAGGGACAAGACCCGAACGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1
CDS GCA 72 bp ATCTCTTCCTCGGAGAAGCGGCCAATGCCGTGGCCGTaGATCTCGCGTTTCACAATTCCTTTCGTTATGTGG +
Preference number: 6 (lower is better)
Translates to: ISSSEKRPMPWP*ISRFTIPFVMW
Trigger: CCACATAACGAAAGGAATTGTGAAACGCGAGATGCACGGCCACGGCATTGGCCGCTTCTCCGAGGAAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000480148.1
CDS CCA 72 bp CCGTGCATCTCGCGTTTCACAATTCCTTTCGTTATGTaGCACACAACCCACCTCAGCAGGTTGCTGAAGGGA +
Preference number: 6 (lower is better)
Translates to: PCISRFTIPFVM*HTTHLSRLLKG
Trigger: TCCCTTCAGCAACCTGCTGAGGTGGGTTGTGTGCCACATAACGAAAGGAATTGTGAAACGCGAGATGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000480148.1
CDS CAA 90 bp GCCTGTGCCAAGTGTCCAAAGACAGTGGCGTCAAGAGTGGAAAGCTaGGGCCCCATGATGTACTTCTTATCACCTGATACGGTAAGTCAG +
Preference number: 6 (lower is better)
Translates to: ACAKCPKTVASRVES*GPMMYFLSPDTVSQ
Trigger: CTGACTTACCGTATCAGGTGATAAGAAGTACATCATGGGGCCCAAGCTTTCCACTCTTGACGCCACTGTCTTTGGACACTTGGCACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538471.1
CDS GCA 72 bp AATCCAGCAGCGGGGTGTGGGTTTTGCTGCCTTCGCTaGTCTCCTCAGACTCATAGATGGTATTGTCATCAT +
Preference number: 6 (lower is better)
Translates to: NPAAGCGFCCLR*SPQTHRWYCHH
Trigger: ATGATGACAATACCATCTATGAGTCTGAGGAGAGCAGCGAAGGCAGCAAAACCCACACCCCGCTGCTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389677.6
ENST00000461803.1
ENST00000538471.1
CDS CCA 72 bp AGTAGAAGTGCTCCTCCACCATCTTGGTCACCGCTCTaGAGATGGCTCTTTCATGAGGGCCAAGGTTTTTGT +
Preference number: 6 (lower is better)
Translates to: SRSAPPPSWSPL*RWLFHEGQGFC
Trigger: ACAAAAACCTTGGCCCTCATGAAAGAGCCATCTCCAGAGCGGTGACCAAGATGGTGGAGGAGCACTTCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000480148.1
CDS CAA 72 bp AAGTGTCCAAAGACAGTGGCGTCAAGAGTGGAAAGCTaGGGCCCCATGATGTACTTCTTATCACCCAAAAGC +
Preference number: 6 (lower is better)
Translates to: KCPKTVASRVES*GPMMYFLSPKS
Trigger: GCTTTTGGGTGATAAGAAGTACATCATGGGGCCCAAGCTTTCCACTCTTGACGCCACTGTCTTTGGACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389677.6
CDS CAA 72 bp AAGTGTCCAAAGACAGTGGCGTCAAGAGTGGAAAGCTaGGGCCCCATGATGTACTTCTTATCACCTGATACG +
Preference number: 6 (lower is better)
Translates to: KCPKTVASRVES*GPMMYFLSPDT
Trigger: CGTATCAGGTGATAAGAAGTACATCATGGGGCCCAAGCTTTCCACTCTTGACGCCACTGTCTTTGGACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538471.1
CDS TCA 72 bp TGCCCTTCACCTCCACTCAACTCTCTACTGATGAGCTaGCAGCATGGCCTGGGAATTAATAGTATTGCACTA +
Preference number: 6 (lower is better)
Translates to: CPSPPLNSLLMS*QHGLGINSIAL
Trigger: TAGTGCAATACTATTAATTCCCAGGCCATGCTGTCAGCTCATCAGTAGAGAGTTGAGTGGAGGTGAAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461803.1
CDS CAA 72 bp AATTTCCTCCTTATCCTCTCACAGTACATGGCAAGGTaGATCAGCTCACCTTTGATCAGCCGTTCGGGTCTT +
Preference number: 6 (lower is better)
Translates to: NFLLILSQYMAR*ISSPLISRSGL
Trigger: AAGACCCGAACGGCTGATCAAAGGTGAGCTGATCAACCTTGCCATGTACTGTGAGAGGATAAGGAGGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389677.6
ENST00000538471.1