RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAT4 (Homo sapiens)

Ensembl gene IDs: ENSG00000196159

Ensembl transcript IDs: ENST00000335110.5, ENST00000394329.9, ENST00000509444.1, ENST00000674496.2, ENST00000678072.1

Found 1219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTTTCCAAATGCTGCATaGCACATAACTAGTTACAAA +
Preference number: 2 (lower is better)
Translates to: YATGKAQVLFCNGKGINFFPNAA*HITSYK
Trigger: TTTGTAACTAGTTATGTGGCATGCAGCATTTGGAAA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
3UTR-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGCACAAGTTCTTTTCTaGAATGGTAAAGGTATCAAT +
Preference number: 2 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSAQVLF*NGKGIN
Trigger: ATTGATACCTTTACCATTGCAGAAAAGAACTTGTGC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
3UTR CCA 72 bp AGAAGTGCTGCTGAGAACATCATTCGCATAGCAAGGTaGCAGTGTTCTGGGGACAACATGCAATCATTCTGT +
Preference number: 3 (lower is better)
Translates to: RSAAENIIRIAR*QCSGDNMQSFC
Trigger: ACAGAATGATTGCATGTTGTCCCCAGAACACTGCCACCTTGCTATGCGAATGATGTTCTCAGCAGCACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
3UTR TCA 72 bp CAACATGCAATCATTCTGTTCCTAATGGAAGCCTCATaGAAGTCAGGAGACTATAATCATTTGCTCAAGGAT +
Preference number: 3 (lower is better)
Translates to: QHAIILFLMEAS*KSGDYNHLLKD
Trigger: ATCCTTGAGCAAATGATTATAGTCTCCTGACTTTCATGAGGCTTCCATTAGGAACAGAATGATTGCATGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCTCGGCGCGCCCAGTaGGGGAAGGCACGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPRRAQ*GKARLC
Trigger: ACAGAGGCGTGCCTTCCCTCACTGGGCGCGCCGAGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCGCCGCCGCCCCTGTTaGGGCTTCAAGCCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRRRPC*GFKPVV
Trigger: GACCACGGGCTTGAAGCCGCAACAGGGGCGGCGGCG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTGCGTCCGTCACGGTaGGCAGAGCCACCACGGTGC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLRPSR*AEPPRC
Trigger: GCACCGTGGTGGCTCTGCTCACCGTGACGGACGCAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCGGGCAGAAACAGCGTaGGGTCCCCGAGTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRAETA*GPRVAL
Trigger: GAGGGCGACTCGGGGACCGCACGCTGTTTCTGCCCG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCGCCGCCGCCCCTGTTaGGGCTTCAAGCCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSRRRPC*GFKPVV
Trigger: GACCACGGGCTTGAAGCCGCAACAGGGGCGGCGGCG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCTGGTGCTGCTGCCTaGGTGCCCACAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPGAAA*VPTGPP
Trigger: GGGAGGACCTGTGGGCACCCAGGCAGCAGCACCAGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCCGCCGCCGCCACCTaGAGGACGCTGGAACCCACA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSAAAT*RTLEPT
Trigger: TGTGGGTTCCAGCGTCCTCCAGGTGGCGGCGGCGGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTACAGAAGAGCGCGCCTaGACTGCTGCGCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFTEERA*TAAPGG
Trigger: GCCCCCTGGCGCAGCAGTCCAGGCGCGCTCTTCTGT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCTGGTACTGCGGAGTaGCCTCACGGTCCAGTCCGC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFAGTAE*PHGPVR
Trigger: GCGGACTGGACCGTGAGGTCACTCCGCAGTACCAGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGTCCTCCCTCGGCCCTaGGACCGTGGTACCTTCGAG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFVLPRP*DRGTFE
Trigger: CTCGAAGGTACCACGGTCGCAGGGCCGAGGGAGGAC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCAGGCGGCGGCGTCTaGGCGCAGGCAGTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPGGGV*AQAVRE
Trigger: TTCCCGAACTGCCTGCGCGCAGACGCCGCCGCCTGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGCCGGGGCCGAAGGTTaGACTGCGGTGGAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSAGAEG*TAVELG
Trigger: CCCTAGCTCCACCGCAGTCCAACCTTCGGCCCCGGC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGCACTCGCACTTCGGTaGGGTAGGTGGGCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSALALR*GRWARW
Trigger: CCAGCGCGCCCACCTACCCCACCGAAGTGCGAGTGC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGCCTGGCTCACAGCTaGCACCATTCTGGCACGGGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGLAHS*HHSGTG
Trigger: ACCCGTGCCAGAATGGTGGCAGCTGTGAGCCAGGCC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCAGGTGAAGCCGGAGTaGAGGCCTGGCTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFQVKPE*RPGSQL
Trigger: CAGCTGTGAGCCAGGCCTGCACTCCGGCTTCACCTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGACGGTTGCGCAGCTaGCCACGATGGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRRLRS*PRWQAQ
Trigger: CTGTGCCTGCCATCGTGGGCAGCTGCGCAACCGTCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGAGGGCCAAGACGGTTaGGCAGCTGCCCACGATGGC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSEGQDG*AAAHDG
Trigger: GCCATCGTGGGCAGCTGCGCAACCGTCTTGGCCCTC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGTCCTCCCTCGGCCCTaGGACCGTGGTACCTTCGAG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSVLPRP*DRGTFE
Trigger: CTCGAAGGTACCACGGTCGCAGGGCCGAGGGAGGAC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGTGCCTGGTGCTGCTaGCTGGGTGCCCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSAWCC*LGAHRS
Trigger: GGACCTGTGGGCACCCAGGCAGCAGCACCAGGCACT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGTCAGCAGTGCCTGGTaGTGCTGCCTGGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSVSSAW*CCLGAH
Trigger: GTGGGCACCCAGGCAGCAGCACCAGGCACTGCTGAC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGCCGAAGGTTGGACTaGGGTGGAGCTAGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGRRLD*GGARAP
Trigger: CGGAGCCCTAGCTCCACCGCAGTCCAACCTTCGGCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGCGCGCCTCGCCCCTaGCCTCGCTATCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSAPRP*PRYLCF
Trigger: AAAGCAGAGATAGCGAGGGCAGGGGCGAGGCGCGCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGCATTTTTCACCTCTaGCGGGGCGCCTGCCGACCC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGIFHL*RGACRP
Trigger: GGGTCGGCAGGCGCCCCGGCAGAGGTGAAAAATGCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGGAGCGCTCAACTCTaGCCCTTCCCCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGSAQL*PFPSCS
Trigger: GCTGCAGGAGGGGAAGGGGCAGAGTTGAGCGCTCCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTACGTCCAAGCACAACTaGGCACCGGGGAAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFTSKHN*APGKGW
Trigger: CCACCCCTTCCCCGGTGCGCAGTTGTGCTTGGACGT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCGTGGACCCAGGCCTaGCCCGGAAGCAATGACAGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPWTQA*PGSNDS
Trigger: ACTGTCATTGCTTCCGGGGCAGGCCTGGGTCCACGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCCTTGGACACCAGATaGAGGAACGCTCCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPLDTR*RNAPSP
Trigger: CGGCGAGGGAGCGTTCCTGCATCTGGTGTCCAAGGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGCCGGGGCCGAAGGTTaGACTGCGGTGGAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIAGAEG*TAVELG
Trigger: CCCTAGCTCCACCGCAGTCCAACCTTCGGCCCCGGC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCGGCGAAGTCGGCGCTaGGCTGTAGTGACGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRRSRR*AVVTPS
Trigger: GGAGGGCGTCACTACAGCCCAGCGCCGACTTCGCCG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTAGCGTTCGCGCTCTaGCTCCCGTACCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLAFAL*LPYPGA
Trigger: CGCTCCCGGGTACGGGAGCCAGAGCGCGAACGCTAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTAGCGTTCGCGCTCTaGCTCCCGTACCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILAFAL*LPYPGA
Trigger: CGCTCCCGGGTACGGGAGCCAGAGCGCGAACGCTAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAGCACTTGGAACACCTaGCGCGGCTCGGCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSTWNT*RGSAPW
Trigger: CCACGGGGCCGAGCCGCGCCAGGTGTTCCAAGTGCT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAGCCGGGGCGCGTCTaGATGGTGCCTACCAGAGTG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKPGRV*MVPTRV
Trigger: CACTCTGGTAGGCACCATCCAGACGCGCCCCGGCTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTGGGCAGCTACAGGTaGAGCCGGAGTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLGSYR*SRSAGL
Trigger: CAGGCCTGCACTCCGGCTTCACCTGTAGCTGCCCAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTGGGCAGCTACAGGTaGAGCCGGAGTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILGSYR*SRSAGL
Trigger: CAGGCCTGCACTCCGGCTTCACCTGTAGCTGCCCAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCGCTCGGGTTCAGGGTaGTGTCCAGACGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRSGSG*CPDGSA
Trigger: GGCGCTTCCGTCTGGACATCACCCTGAACCCGAGCG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTCACGTCCAGCAGCTaGATCAGCGCCTCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIFTSSS*ISASAR
Trigger: GCGCGCCGAGGCGCTGATTCAGCTGCTGGACGTGAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCACCCCAGCAGGGGTTaGTGGCACAAATGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFHPSRG*WHKCSG
Trigger: GCCCGAACATTTGTGCCAGCAACCCCTGCTGGGGTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAGGTGAAGCCGGAGTaGAGGCCTGGCTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQVKPE*RPGSQL
Trigger: CAGCTGTGAGCCAGGCCTGCACTCCGGCTTCACCTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGAGGGCCAAGACGGTTaGGCAGCTGCCCACGATGGC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIEGQDG*AAAHDG
Trigger: GCCATCGTGGGCAGCTGCGCAACCGTCTTGGCCCTC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAGTGCCTGGTGCTGCTaGCTGGGTGCCCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSAWCC*LGAHRS
Trigger: GGACCTGTGGGCACCCAGGCAGCAGCACCAGGCACT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGGCCGAAGGTTGGACTaGGGTGGAGCTAGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISGRRLD*GGARAP
Trigger: CGGAGCCCTAGCTCCACCGCAGTCCAACCTTCGGCC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGCGCGCCTCGCCCCTaGCCTCGCTATCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSAPRP*PRYLCF
Trigger: AAAGCAGAGATAGCGAGGGCAGGGGCGAGGCGCGCT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGCATTTTTCACCTCTaGCGGGGCGCCTGCCGACCC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGIFHL*RGACRP
Trigger: GGGTCGGCAGGCGCCCCGGCAGAGGTGAAAAATGCC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGGAGCGCTCAACTCTaGCCCTTCCCCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGSAQL*PFPSCS
Trigger: GCTGCAGGAGGGGAAGGGGCAGAGTTGAGCGCTCCC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTACCAGGAGCTGGTACTaGGGAGTGACCTCACGGTCC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFTRSWY*GVTSRS
Trigger: GGACCGTGAGGTCACTCCGCAGTACCAGCTCCTGGT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGCCGCGGGAGAATCTaGGTCCGTCACGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGRGRI*VRHGEQ
Trigger: CTGCTCACCGTGACGGACGCAGATTCTCCCGCGGCC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCCAGCAGGGGTTGCTaGCACAAATGTTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPSRGC*HKCSGH
Trigger: GTGGCCCGAACATTTGTGCCAGCAACCCCTGCTGGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCATTCTGGCACGGGTaGGAGGCACAGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPFWHG*EAQSPG
Trigger: TCCTGGGGACTGTGCCTCCCACCCGTGCCAGAATGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCGGCTTCAAGCCCGTaGTCCGGCACAAACAACAGC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFAASSP*SGTNNS
Trigger: GCTGTTGTTTGTGCCGGACCACGGGCTTGAAGCCGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCGGGGCGCGTCTGGATaGTGCCTACCAGAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRGASG*CLPECL
Trigger: CAGGCACTCTGGTAGGCACCATCCAGACGCGCCCCG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGCTCTCGCGGTCGATaGTGGAGGTGGTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGSRGR*WRWCTG
Trigger: CCCTGTACACCACCTCCACCATCGACCGCGAGAGCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCACCTGGAGGACGCTaGAACCCACAACCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPPGGR*NPQPRP
Trigger: AGGACGCGGTTGTGGGTTCCAGCGTCCTCCAGGTGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGGCGTAGCGCGAGGTaGCCGGGAAGTAGCGGAACT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSRRSAR*PGSSGT
Trigger: AGTTCCGCTACTTCCCGGCCACCTCGCGCTACGCCT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCAGCTCCCTCCATTCTaGCATGGGCCATGCACACAG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFQLPPF*HGPCTQ
Trigger: CTGTGTGCATGGCCCATGTCAGAATGGAGGGAGCTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCACACGCCCTACCAGTaGAGCCATCTGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISHTPYQ*SHLGSC
Trigger: GCAGCTGCCCAGATGGCTTCACTGGTAGGGCGTGTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAAAGGACCACCAGGTTaGTCACGTCGCTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSKGPPG*SRRWAG
Trigger: GCCTGCCCAGCGACGTGATCAACCTGGTGGTCCTTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGTGGTCCACACCGTTTaGGCCGATGTCCGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSVVHTV*ADVRVG
Trigger: ACCGACTCGGACATCGGCTCAAACGGTGTGGACCAC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCTCATTGCCGCGGATaGTGCGGTAGGAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPHCRG*CGRSGG
Trigger: ACCACCGCTCCTACCGCATCATCCGCGGCAATGAGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAGTGGCCTGATCCTTaGGAGGCTGAGGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQWPDP*EAEGSP
Trigger: AGGGGATCCCTCAGCCTCTCAAGGATCAGGCCACTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGACGGTTGCGCAGCTaGCCACGATGGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRRLRS*PRWQAQ
Trigger: CTGTGCCTGCCATCGTGGGCAGCTGCGCAACCGTCT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCTCCTGCTCTGGAGATaGCAAAGGGGCGCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLLLWR*QRGAGD
Trigger: ATCCCCAGCGCCCCTTTGGCATCTCCAGAGCAGGAG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTCTGCCGGGGCGCCTaGCGACCCATTATTTGTACA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLCRGA*RPIICT
Trigger: TGTACAAATAATGGGTCGGCAGGCGCCCCGGCAGAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCTCAAAAACCAGGCTaGAACGCCCCTCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPQKPG*NAPPTG
Trigger: CCCTGTTGGAGGGGCGTTGCAGCCTGGTTTTTGAGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGGCGCGTCTGGATGGTaGCTACCAGAGTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISGASGW*LPECLE
Trigger: CTCCAGGCACTCTGGTAGGCACCATCCAGACGCGCC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGGTTGTAGGAAGGGATaGGCTCGCGGTCCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISGCRKG*ARGPRR
Trigger: GCGCCTTGGACCGCGAGCGCATCCCTTCCTACAACC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCATTCTGGCACGGGTaGGAGGCACAGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPFWHG*EAQSPG
Trigger: TCCTGGGGACTGTGCCTCCCACCCGTGCCAGAATGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGCCGGAGTGCAGGCCTaGCTCACAGCTGCCACCATT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISAGVQA*LTAATI
Trigger: AATGGTGGCAGCTGTGAGCCAGGCCTGCACTCCGGC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGCCGGAGTGCAGGCCTaGCTCACAGCTGCCACCATT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIAGVQA*LTAATI
Trigger: AATGGTGGCAGCTGTGAGCCAGGCCTGCACTCCGGC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGCGGCTTCAAGCCCGTaGTCCGGCACAAACAACAGC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSAASSP*SGTNNS
Trigger: GCTGTTGTTTGTGCCGGACCACGGGCTTGAAGCCGC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTGGTGCTAAGTCCATaGTCCTGGCTCCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILVLSP*SWLPAA
Trigger: CGCTGCGGGGAGCCAGGACCATGGACTTAGCACCAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGGTCGATGGTGGAGGTaGTGTACAGGGCTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISGRWWR*CTGLRC
Trigger: GCACCGGAGCCCTGTACACCACCTCCACCATCGACC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTCTCGCGGTCGATGGTaGAGGTGGTGTACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSRGRW*RWCTGL
Trigger: GAGCCCTGTACACCACCTCCACCATCGACCGCGAGA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTTCGGTGGGGTAGGTaGGCGCGCTGGAAAGGACCA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILRWGR*ARWKGP
Trigger: TGGTCCTTTCCAGCGCGCCCACCTACCCCACCGAAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCCCAGAGGACCCAGTaGTCACGAGGCCGCTATGTT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPQRTQ*SRGRYV
Trigger: AACATAGCGGCCTCGTGACCACTGGGTCCTCTGGGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGGAGCCCAGATCTGTaGCCAGAACCAACAGGGAGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGSPDL*PEPTGS
Trigger: ACTCCCTGTTGGTTCTGGCCACAGATCTGGGCTCCC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGCCACCATGTTGGCATaGGCTGCGAGTACAAGCGCC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSATMLA*AASTSA
Trigger: GGCGCTTGTACTCGCAGCCCATGCCAACATGGTGGC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCTGCAGTCCTCCTCTaGAGAAGACCTCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSAVLL*RRPPMV
Trigger: GACCATGGGAGGTCTTCTTCAGAGGAGGACTGCAGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAGGCGCTGGCCACCTTaGTTAGGCTCAGGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRRWPP*LGSGSA
Trigger: TGCCGAACCTGAGCCTAATCAAGGTGGCCAGCGCCT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCCCGTCAGTTGCCCTaGGCATCAACAGTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPRQLP*ASTVLS
Trigger: GGACAGAACTGTTGATGCTCAGGGCAACTGACGGGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGGCAGACACAGTGGTaGTGTAGCTACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFWQTQW*CSYLQA
Trigger: AGCCTGGAGGTAGCTACATCACCACTGTGTCTGCCA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGACACACTACCCACATaGTATCCCAGCGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFDTLPT*YPSATF
Trigger: GAACGTGGCGCTGGGATATCATGTGGGTAGTGTGTC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCACCCCAGCAGGGGTTaGTGGCACAAATGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIHPSRG*WHKCSG
Trigger: GCCCGAACATTTGTGCCAGCAACCCCTGCTGGGGTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAGGTCCTTCCCGTGTaGGAGTCTGGGCAGCTACAG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQVLPV*ESGQLQ
Trigger: CTGTAGCTGCCCAGACTCGCACACGGGAAGGACCTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTCCTGCTCTGGAGATaGCAAAGGGGCGCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLLLWR*QRGAGD
Trigger: ATCCCCAGCGCCCCTTTGGCATCTCCAGAGCAGGAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAGGGCATGGGGGATTaGCTTGCAAAGCCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKGMGD*LAKPRG
Trigger: TCCCCTAGGCTTTGCAAGGCAATCCCCCATGCCCTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGTGTGTTGTCAGCAGTaGCTGGTGCTGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISVCCQQ*LVLLPG
Trigger: CCCAGGCAGCAGCACCAGGCACTGCTGACAACACAC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGATACTGATAGAGTGTaGAACGGGAGCCACGGGCGG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSDTDRV*NGSHGR
Trigger: CCGCCCGTGGCTCCCGTTGCACACTCTATCAGTATC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCTCTGTCCATCGCCTaGACCGTAAGCGAGTATTGG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPLSIA*TVSEYW
Trigger: CCAATACTCGCTTACGGTGCAGGCGATGGACAGAGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCATGTTGGCATGGGCTaGGAGTACAAGCGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFHVGMG*EYKRLP
Trigger: TGGAAGGCGCTTGTACTCGCAGCCCATGCCAACATG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTACTGGAAAGAGGCTCTaGGGATCCCGCATCACTGCA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFTGKRL*GSRITA
Trigger: TGCAGTGATGCGGGATCCCCAGAGCCTCTTTCCAGT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGCTCCAGCTGGGGATaGAGTCTGAGTCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFCSSWG*SLSQRH
Trigger: GTGCCTTTGACTCAGACTCCATCCCCAGCTGGAGCA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCCTCCATTCTGACATaGGCCATGCACACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPSILT*AMHTGV
Trigger: GACTCCTGTGTGCATGGCCCATGTCAGAATGGAGGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCCAGCAGGGGTTGCTaGCACAAATGTTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPSRGC*HKCSGH
Trigger: GTGGCCCGAACATTTGTGCCAGCAACCCCTGCTGGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCCCGTGTGCGAGTCTaGGCAGCTACAGGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSRVRV*AATGEA
Trigger: GGCTTCACCTGTAGCTGCCCAGACTCGCACACGGGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTCGGCCCTGCGACCGTaGTACCTTCGAGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISALRP*YLRGFS
Trigger: ACTGAAGCCTCGAAGGTACCACGGTCGCAGGGCCGA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCGGCCCTGCGACCGTaGTACCTTCGAGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSALRP*YLRGFS
Trigger: ACTGAAGCCTCGAAGGTACCACGGTCGCAGGGCCGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCTGCCCTAGCTTCATaGGCAGTGTGTTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFAALAS*AVCCQQ
Trigger: CTGCTGACAACACACTGCCCATGAAGCTAGGGCAGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCTAAGTCCATGGTCCTaGCTCCCCGCAGCGAAGAAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLSPWS*LPAAKN
Trigger: GTTCTTCGCTGCGGGGAGCCAGGACCATGGACTTAG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTGCTCTTCCAGCACTTaGAACACCTGGCGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSICSSST*NTWRGS
Trigger: CGAGCCGCGCCAGGTGTTCCAAGTGCTGGAAGAGCA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGGTCCAGTCCGCCCTTaGACACCAGATGCAGGAACG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISGPVRP*TPDAGT
Trigger: CGTTCCTGCATCTGGTGTCCAAGGGCGGACTGGACC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGTCTCAGGGTCCATTTaGAAGGGGGTCCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISVSGSI*KGVPSS
Trigger: GGACGAGGGGACCCCCTTCCAAATGGACCCTGAGAC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTACCGTAAGCGAGTATTaGCGCCGAGCTTCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFTVSEY*RRASKS
Trigger: GGACTTCGAAGCTCGGCGCCAATACTCGCTTACGGT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCGGAGATGTTCCCGTTaGCCGCGGGAGAATCTGCGT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRRCSR*PRENLR
Trigger: ACGCAGATTCTCCCGCGGCCAACGGGAACATCTCCG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTTTGCACTTCAAAGTaGCGCTGCTCATTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLCTSK*RCSLPP
Trigger: CGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGGCATAGGACACCTTaGGGTGAACTCCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGHRTP*GELPGP
Trigger: GGGACCAGGGAGTTCACCCCAAGGTGTCCTATGCCC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCACTGTGCCCCCACTaGCCACTACCTTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSLCPH*PLPSAD
Trigger: ATCAGCTGAAGGTAGTGGCCAGTGGGGGCACAGTGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGTTCTCCTCTACCGTaGGATCCAGCATGTCCGTTG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFCSPLP*DPACPL
Trigger: CAACGGACATGCTGGATCTCACGGTAGAGGAGAACA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCAGGGTCAGTGGACTaGAGGGTCATCACCAAAGTG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSGSVD*RVITKV
Trigger: CACTTTGGTGATGACCCTTCAGTCCACTGACCCTGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGAGGCTGGTAACTCCTaGAGTAAGGGAGCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFEAGNS*SKGAVE
Trigger: TTCCACTGCTCCCTTACTTCAGGAGTTACCAGCCTC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTCGGATGTTGCTCGTaGCTGTGCTGTGAACTCCAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLGCCS*LCCELH
Trigger: ATGGAGTTCACAGCACAGTCACGAGCAACATCCGAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCAGCTCCCTCCATTCTaGCATGGGCCATGCACACAG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIQLPPF*HGPCTQ
Trigger: CTGTGTGCATGGCCCATGTCAGAATGGAGGGAGCTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGTGATGCCATGGCCTaGGGACTCTTGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFCDAMA*GLLLLL
Trigger: AAGGAGAAGCAAGAGTCCTCAGGCCATGGCATCACA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGGTCTAGAACCATGTaGTGCCATGGCCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFWSRTM*CHGLRT
Trigger: AGTCCTCAGGCCATGGCATCACATGGTTCTAGACCA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTCTGCAGTCCTCCTCTaGAGAAGACCTCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSAVLL*RRPPMV
Trigger: GACCATGGGAGGTCTTCTTCAGAGGAGGACTGCAGA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTGGCGGTGTCTAAGATaGCTTGGCGTCCGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIWRCLR*LGVRCY
Trigger: GTAGCAGCGGACGCCAAGTCATCTTAGACACCGCCA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGCCGCTATGTTCACTaGTATGGAACCATCCCAGTC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGRYVH*YGTIPV
Trigger: GACTGGGATGGTTCCATATCAGTGAACATAGCGGCC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCCCACTCTGAGCATTaGCCTGAAACCGAGACCTGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPHSEH*PETETC
Trigger: ACAGGTCTCGGTTTCAGGTCAATGCTCAGAGTGGGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGGAACCAATCACAGCTaGTGGGTCTGCAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISGTNHS*WVCSKG
Trigger: GCCCTTGCTGCAGACCCATCAGCTGTGATTGGTTCC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGTCCCTCTTTGCAATaGCACTGCTGCCATGACCAG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSPSLQ*HCCHDQ
Trigger: CTGGTCATGGCAGCAGTGTCATTGCAAAGAGGGACT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGAGGCTGCCATTCCTaGTCTCCTGGCAATCACAGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGGCHS*SPGNHS
Trigger: ACTGTGATTGCCAGGAGAGCAGGAATGGCAGCCTCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAGGACTTCCAGCTTTaGACACCTTCCCCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQDFQL*TPSPED
Trigger: GTCCTCAGGGGAAGGTGTGCAAAGCTGGAAGTCCTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCTCAGAACACAGACATaGCCCGCAGGACTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLRTQT*PAGLPA
Trigger: AGCTGGAAGTCCTGCGGGGCATGTCTGTGTTCTGAG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGGCCTTCTTCCCCCTaGACTGGTTACACAGGATCA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFWPSSP*TGYTGS
Trigger: TGATCCTGTGTAACCAGTGCAGGGGGAAGAAGGCCA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGGTTCCCTTCAGGCTaGTTCCTCACAGTCATGTCA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGFPSG*FLTVMS
Trigger: TGACATGACTGTGAGGAAGCAGCCTGAAGGGAACCC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCGAAGGGGCGATGCTaGTGGCGTTGTCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPKGRC*WRCQCH
Trigger: ATGACATTGACAACGCCAGCAGCATCGCCCCTTCGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCATCCGAAGGGGCGATaGTGCTGGCGTTGTCAATGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSHPKGR*CWRCQC
Trigger: ACATTGACAACGCCAGCAGCATCGCCCCTTCGGATG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATCTGCCCAATCGGCTaGTTTAGGCGACTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSICPIG*FRRLPG
Trigger: ACCAGGGAGTCGCCTAAAGCAGCCGATTGGGCAGAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTCTGCCGGGGCGCCTaGCGACCCATTATTTGTACA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILCRGA*RPIICT
Trigger: TGTACAAATAATGGGTCGGCAGGCGCCCCGGCAGAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGGCAGTTCGGGAACTaGGTTCCAAGCGCTAGCGTT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSRQFGN*VPSASV
Trigger: AACGCTAGCGCTTGGAACGCAGTTCCCGAACTGCCT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCTCAAAAACCAGGCTaGAACGCCCCTCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPQKPG*NAPPTG
Trigger: CCCTGTTGGAGGGGCGTTGCAGCCTGGTTTTTGAGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTGGTGCCTACCAGAGTaGCTGGAGGTTGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSWCLPE*LEVALP
Trigger: TGGAAGAGCAACCTCCAGGCACTCTGGTAGGCACCA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGTGGCGCTGCTCATTaGCCCCGAGAATTTGCACGG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISGAAH*PREFAR
Trigger: CCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGCACTTTGCTGCTTTaGACTTCAAAGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGTLLL*TSKWRC
Trigger: GCAGCGCCACTTTGAAGTGCAAAGCAGCAAAGTGCC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAAAATCACCAGGCTTaGCACAGAAGAGCGCGCCTG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKNHQA*HRRARL
Trigger: CAGGCGCGCTCTTCTGTGGCAAGCCTGGTGATTTTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGTCTCCAGTCACTGTaGCCCCACTGGCCACTACCT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCLQSL*PHWPLP
Trigger: AGGTAGTGGCCAGTGGGGGCACAGTGACTGGAGACA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCATGTTGGCATGGGCTaGGAGTACAAGCGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSHVGMG*EYKRLP
Trigger: TGGAAGGCGCTTGTACTCGCAGCCCATGCCAACATG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCCCTGTCCAACCGCCTaGTTGCTATCAGATCTCCGG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISPCPTA*LLSDLR
Trigger: CCGGAGATCTGATAGCAACCAGGCGGTTGGACAGGG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGCACACTGGTGGAACTaGAAAGAGGCTCTGGGGATC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSAHWWN*KEALGI
Trigger: GATCCCCAGAGCCTCTTTCCAGTTCCACCAGTGTGC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGAGATCAGGGTCAGTaGACTGAAGGGTCATCACCA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGDQGQ*TEGSSP
Trigger: TGGTGATGACCCTTCAGTCCACTGACCCTGATCTCC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCTGCCAAAGCTTGGCTaGGTTCCAGAGGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLPKLG*VPEAFH
Trigger: ATGGAAGGCCTCTGGAACCCAGCCAAGCTTTGGCAG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTGTGCTGCCAAAGCTTaGCTGGGTTCCAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSCAAKA*LGSRGL
Trigger: AAGGCCTCTGGAACCCAGCCAAGCTTTGGCAGCACA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAGGGGCGCTGGGGATaGTTTCTGAGTTGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKGRWG*FLSCEE
Trigger: TTCCTCACAACTCAGAAACCATCCCCAGCGCCCCTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATGCCAAAGGGGCGCTaGGGATGGTTTCTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFMPKGR*GWFLSC
Trigger: ACAACTCAGAAACCATCCCCAGCGCCCCTTTGGCAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTTGCTCCTAAGGGCATaGGGGATTGCCTTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLLLRA*GIALQS
Trigger: GCTTTGCAAGGCAATCCCCCATGCCCTTAGGAGCAA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCTTGTTCTAGACAGTaGCCTTCTGCAGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPCSRQ*PSAVLL
Trigger: GAGGAGGACTGCAGAAGGCCACTGTCTAGAACAAGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGCTGCCCTAGCTTCATaGGCAGTGTGTTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSAALAS*AVCCQQ
Trigger: CTGCTGACAACACACTGCCCATGAAGCTAGGGCAGC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGGAAGACCGCGAGCTaGAGCAGCACTCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGKTAS*SSTQKL
Trigger: AAGTTTCTGAGTGCTGCTCCAGCTCGCGGTCTTCCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGCCTACCAGAGTGCCTaGAGGTTGCTCTTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIAYQSA*RLLFQH
Trigger: GTGCTGGAAGAGCAACCTCCAGGCACTCTGGTAGGC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTGTTCTCCTCTACCGTaGGATCCAGCATGTCCGTTG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSCSPLP*DPACPL
Trigger: CAACGGACATGCTGGATCTCACGGTAGAGGAGAACA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGTCCAGTTCTCCAGTaGGCCTCACTTCACCATCAA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFCPVLQ*ASLHHQ
Trigger: TTGATGGTGAAGTGAGGCTCACTGGAGAACTGGACA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTTGGGACCCCTTCACTaGTCTGCACACTGTAGATGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLGPLH*SAHCRC
Trigger: ACATCTACAGTGTGCAGATCAGTGAAGGGGTCCCAA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTGACAAAGGTCACATaGGTTCCTATTGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLTKVT*VPIGTP
Trigger: AGGGGTCCCAATAGGAACTCATGTGACCTTTGTCAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGCTGGGGATGGAGTCTaGGTCAAAGGCACTGACAAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSAGDGV*VKGTDK
Trigger: TTTGTCAGTGCCTTTGACTCAGACTCCATCCCCAGC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAGCAGTGCTCAGACTaGAATAACTGGTGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQQCSD*NNWWQD
Trigger: GTCCTGCCACCAGTTATTTCAGTCTGAGCACTGCTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGAGGCTGGTAACTCCTaGAGTAAGGGAGCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSEAGNS*SKGAVE
Trigger: TTCCACTGCTCCCTTACTTCAGGAGTTACCAGCCTC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCTCCCACTAAATTGTaGCAGGTTCCACCACTGTGG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPPTKL*QVPPLW
Trigger: CCACAGTGGTGGAACCTGTCACAATTTAGTGGGAGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTCTGCAGGCACTCATTaGTATCTCTCTCACACGCCC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSAGTH*YLSHTP
Trigger: GGGCGTGTGAGAGAGATATCAATGAGTGCCTGCAGA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGGCCACCGAAGTCCTaGGTAGGGTGGATAATATCT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRPPKS*VGWIIS
Trigger: AGATATTATCCACCCTACTCAGGACTTCGGTGGCCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGCTATGCTTCCCGCTaGAAGGAAGACTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSYASR*KEDFLH
Trigger: GTGGAGAAAGTCTTCCTTTCAGCGGGAAGCATAGCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATCTCTTCAGGGCCCTaGCTCAGAACACAGACATGC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSISSGP*LRTQTC
Trigger: GCATGTCTGTGTTCTGAGTCAGGGCCCTGAAGAGAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGCCTTGTGGCATAGTTaGAAATGCCAGGTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSALWHS*KCQVGR
Trigger: CCTGCCAACCTGGCATTTTCAACTATGCCACAAGGC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGCCTGGAAAATGCTGTaGCCTGCCTGCCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIAWKML*PACQFS
Trigger: GGAGAATTGGCAGGCAGGTCACAGCATTTTCCAGGC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGAGGGGGATTGTCCCTaGATCCACTGCTTGAATTAC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFEGDCP*IHCLNY
Trigger: GTAATTCAAGCAGTGGATTCAGGGACAATCCCCCTC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAGTTCTGGGTGTGCTaGCTCGATCTGTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQFWVC*LDLLPE
Trigger: TTCAGGCAACAGATCGAGGCAGCACACCCAGAACTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGGATCCCGCATCACTaGAGACCACTACCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGIPHH*RPLPKY
Trigger: ATACTTTGGTAGTGGTCTGCAGTGATGCGGGATCCC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCTCTCAGGGATGGTTaGACTCATGTGGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFALRDG*THVALR
Trigger: TCTCAAAGCCACATGAGTGCAACCATCCCTGAGAGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCAATCTCTCTGGTTGTaGTCAGAACTCCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFQSLWL*SELQQC
Trigger: GCACTGCTGGAGTTCTGAGCACAACCAGAGAGATTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGAGGCTGCCATTCCTaGTCTCCTGGCAATCACAGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGGCHS*SPGNHS
Trigger: ACTGTGATTGCCAGGAGAGCAGGAATGGCAGCCTCC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAGGACTTCCAGCTTTaGACACCTTCCCCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQDFQL*TPSPED
Trigger: GTCCTCAGGGGAAGGTGTGCAAAGCTGGAAGTCCTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTCAGAACACAGACATaGCCCGCAGGACTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLRTQT*PAGLPA
Trigger: AGCTGGAAGTCCTGCGGGGCATGTCTGTGTTCTGAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTGGCCTTCTTCCCCCTaGACTGGTTACACAGGATCA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSWPSSP*TGYTGS
Trigger: TGATCCTGTGTAACCAGTGCAGGGGGAAGAAGGCCA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGGTTCCCTTCAGGCTaGTTCCTCACAGTCATGTCA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGFPSG*FLTVMS
Trigger: TGACATGACTGTGAGGAAGCAGCCTGAAGGGAACCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCATCCGAAGGGGCGATaGTGCTGGCGTTGTCAATGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIHPKGR*CWRCQC
Trigger: ACATTGACAACGCCAGCAGCATCGCCCCTTCGGATG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGTGTTGAATGATGTCTaGATCCGAAGGGGCGATGCT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFVLNDV*IRRGDA
Trigger: AGCATCGCCCCTTCGGATGCAGACATCATTCAACAC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCTGGTAAGTCAAACTaGTTGCTCCTAAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFAGKSN*LLLRAW
Trigger: CCATGCCCTTAGGAGCAAGCAGTTTGACTTACCAGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATCTGCCCAATCGGCTaGTTTAGGCGACTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIICPIG*FRRLPG
Trigger: ACCAGGGAGTCGCCTAAAGCAGCCGATTGGGCAGAT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGACCTCCCATGGTCTaGACTGCAGATACTTGGGTT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRPPMV*TADTWV
Trigger: AACCCAAGTATCTGCAGTGCAGACCATGGGAGGTCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAAAGTCCCTGCTTGCTaGCCTAGCTTCATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSKVPAC*PSFMGS
Trigger: ACTGCCCATGAAGCTAGGGCAGCAAGCAGGGACTTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAGGCAGTTCGGGAACTaGGTTCCAAGCGCTAGCGTT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRQFGN*VPSASV
Trigger: AACGCTAGCGCTTGGAACGCAGTTCCCGAACTGCCT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGCAGAGCCACCACGGTaGCCACTTGAGCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISAEPPR*PLEHSH
Trigger: ATGAGAATGCTCAAGTGGGCACCGTGGTGGCTCTGC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTGCCCCCGAGAATTTaGACGGAGATGTTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLPPRI*TEMFPL
Trigger: CAACGGGAACATCTCCGTGCAAATTCTCGGGGGCAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCAGGTCCCCGTCAGTTaGCCTGAGCATCAACAGTTC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIQVPVS*PEHQQF
Trigger: GAACTGTTGATGCTCAGGGCAACTGACGGGGACCTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCACCAGGTAAAGACATaGTCCTTGCTCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISHQVKT*SLLPVQ
Trigger: CTGGACCGGGAGCAAGGAGCATGTCTTTACCTGGTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTGGAGGTATCAGTTCTaGGTGTGCTGCCTCGATCTG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSWRYQF*VCCLDL
Trigger: CAGATCGAGGCAGCACACCCAGAACTGATACCTCCA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTACTGGAAAGAGGCTCTaGGGATCCCGCATCACTGCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISTGKRL*GSRITA
Trigger: TGCAGTGATGCGGGATCCCCAGAGCCTCTTTCCAGT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATGGACCCAATGCTATaGCTCTCAGGGATGGTTGCA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFMDPML*LSGMVA
Trigger: TGCAACCATCCCTGAGAGCCATAGCATTGGGTCCAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAAACCTGCTCCAGCTaGGGATGGAGTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKTCSS*GWSLSQ
Trigger: TTGACTCAGACTCCATCCCCAGCTGGAGCAGGTTTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCCATCTGTGGACCTTaGCTGGGAATTCAGATCACA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFAICGP*LGIQIT
Trigger: TGTGATCTGAATTCCCAGCCAAGGTCCACAGATGGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCAAACGTGCCATCTGTaGACCTTGGCTGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFQTCHL*TLAGNS
Trigger: TGAATTCCCAGCCAAGGTCCACAGATGGCACGTTTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCAGGTTCCACCACTGTaGCAAGGTGATGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFQVPPL*QGDGRH
Trigger: ATGTCTTCCATCACCTTGCCACAGTGGTGGAACCTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTGCCAAAGCTTGGCTaGGTTCCAGAGGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLPKLG*VPEAFH
Trigger: ATGGAAGGCCTCTGGAACCCAGCCAAGCTTTGGCAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGTGCTGCCAAAGCTTaGCTGGGTTCCAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCAAKA*LGSRGL
Trigger: AAGGCCTCTGGAACCCAGCCAAGCTTTGGCAGCACA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCAAAAGGCTCCAACATaGCACCTCGTAAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFQKAPT*HLVSFA
Trigger: GGCAAAGCTTACGAGGTGCCATGTTGGAGCCTTTTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAAGGGGCGCTGGGGATaGTTTCTGAGTTGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSKGRWG*FLSCEE
Trigger: TTCCTCACAACTCAGAAACCATCCCCAGCGCCCCTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGTCGAGACAGAGGGTTaGGAGTTGGGCATGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISVETEG*ELGMLS
Trigger: ACTCAGCATGCCCAACTCCCAACCCTCTGTCTCGAC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTTGGAGAAAGGGGCTaGACTGTGTCGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSFGERG*TVSRQR
Trigger: CCTCTGTCTCGACACAGTCCAGCCCCTTTCTCCAAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGCACTGCAGATACTTaGGTTTCTAGGGCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFCTADT*VSRARC
Trigger: ACACCTCGCCCTAGAAACCCAAGTATCTGCAGTGCA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGGGAAGACCGCGAGCTaGAGCAGCACTCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISGKTAS*SSTQKL
Trigger: AAGTTTCTGAGTGCTGCTCCAGCTCGCGGTCTTCCC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGGCGATGGAATTCCTaGAGTCCCCACTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRRWNS*SPHSSK
Trigger: TTTTGAGGAGTGGGGACTCCAGGAATTCCATCGCCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCGGTGCTACTGTTTATaGCAAACAGGGCGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRCYCL*QTGRGF
Trigger: AAAGCCACGCCCTGTTTGCCATAAACAGTAGCACCG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTACCTCAACCAGGAGCTaGTACTGCGGAGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSITSTRS*YCGVTS
Trigger: TGAGGTCACTCCGCAGTACCAGCTCCTGGTTGAGGT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCAGAGTCGCCATCAGTaGCAGATATCCCACTCACAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFQSRHQ*QISHSH
Trigger: ATGTGAGTGGGATATCTGCCACTGATGGCGACTCTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATTGGTACCCAAGTCTaGGTCAGTGGCAGACACAGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFIGTQV*VSGRHS
Trigger: ACTGTGTCTGCCACTGACCCAGACTTGGGTACCAAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATTCGCATAGCAAGGTaGCAGTGTTCTGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFIRIAR*QCSGDN
Trigger: GTTGTCCCCAGAACACTGCCACCTTGCTATGCGAAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCTCTTGCCACCACCTaGAGAATTGTTCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSLATT*RIVLGS
Trigger: ACTACCCAGAACAATTCTTCAGGTGGTGGCAAGAGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTGGGACCCCTTCACTaGTCTGCACACTGTAGATGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLGPLH*SAHCRC
Trigger: ACATCTACAGTGTGCAGATCAGTGAAGGGGTCCCAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCTGACAAAGGTCACATaGGTTCCTATTGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLTKVT*VPIGTP
Trigger: AGGGGTCCCAATAGGAACTCATGTGACCTTTGTCAG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGCTGGGGATGGAGTCTaGGTCAAAGGCACTGACAAA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISAGDGV*VKGTDK
Trigger: TTTGTCAGTGCCTTTGACTCAGACTCCATCCCCAGC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCATTCCCTGATCCGATaGAGTAAGAAAACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFHSLIR*SKKTCS
Trigger: GGAGCAGGTTTTCTTACTTCATCGGATCAGGGAATG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCAGGGTCAGTGGACTaGAGGGTCATCACCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSGSVD*RVITKV
Trigger: CACTTTGGTGATGACCCTTCAGTCCACTGACCCTGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAGCAGTGCTCAGACTaGAATAACTGGTGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQQCSD*NNWWQD
Trigger: GTCCTGCCACCAGTTATTTCAGTCTGAGCACTGCTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCACCGTCCGAGACTGTaGAGGATTGTCATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSHRPRL*RIVILV
Trigger: GACCAAAATGACAATCCTTCACAGTCTCGGACGGTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTCGGATGTTGCTCGTaGCTGTGCTGTGAACTCCAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLGCCS*LCCELH
Trigger: ATGGAGTTCACAGCACAGTCACGAGCAACATCCGAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCTCCCACTAAATTGTaGCAGGTTCCACCACTGTGG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPPTKL*QVPPLW
Trigger: CCACAGTGGTGGAACCTGTCACAATTTAGTGGGAGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCTGCAGGCACTCATTaGTATCTCTCTCACACGCCC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSAGTH*YLSHTP
Trigger: GGGCGTGTGAGAGAGATATCAATGAGTGCCTGCAGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCTGGGGATGGTTTCTaGGTTGTGAGGAATATCAGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFAGDGF*VVRNIS
Trigger: ACTGATATTCCTCACAACTCAGAAACCATCCCCAGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGCTTGTAGTGTTGAATaGTGTCTGCATCCGAAGGGG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSACSVE*CLHPKG
Trigger: CCCCTTCGGATGCAGACATCATTCAACACTACAAGC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGCCTTGTGGCATAGTTaGAAATGCCAGGTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISALWHS*KCQVGR
Trigger: CCTGCCAACCTGGCATTTTCAACTATGCCACAAGGC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGTGATGCCATGGCCTaGGGACTCTTGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCDAMA*GLLLLL
Trigger: AAGGAGAAGCAAGAGTCCTCAGGCCATGGCATCACA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTGGTCTAGAACCATGTaGTGCCATGGCCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIWSRTM*CHGLRT
Trigger: AGTCCTCAGGCCATGGCATCACATGGTTCTAGACCA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAAAGGTTGTCCCAGTTaGAAGTCCCTGCTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIKGCPS*KSLLAA
Trigger: GGCAGCAAGCAGGGACTTTCAACTGGGACAACCTTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCAGAGACGGAAACTGTaGGGTTGTAGGAAGGGATGC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIQRRKL*GCRKGC
Trigger: GCATCCCTTCCTACAACCTCACAGTTTCCGTCTCTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAAGGCCCTGAAGAATaGTGGTCAATTCAGTGGTCG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQGPEE*WSIQWS
Trigger: CGACCACTGAATTGACCATCATTCTTCAGGGCCTTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGTGACGAGAGCATTTaGACCCTCATCAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFCDESI*TLISIH
Trigger: ATGGATGCTGATGAGGGTGCAAATGCTCTCGTCACA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGTCCAACCGCCTGGTTaGTATCAGATCTCCGGATTC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISVQPPG*YQISGF
Trigger: GAATCCGGAGATCTGATAGCAACCAGGCGGTTGGAC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGTCCAACCGCCTGGTTaGTATCAGATCTCCGGATTC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIVQPPG*YQISGF
Trigger: GAATCCGGAGATCTGATAGCAACCAGGCGGTTGGAC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAGTTCTGGGTGTGCTaGCTCGATCTGTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQFWVC*LDLLPE
Trigger: TTCAGGCAACAGATCGAGGCAGCACACCCAGAACTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGGATCCCGCATCACTaGAGACCACTACCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGIPHH*RPLPKY
Trigger: ATACTTTGGTAGTGGTCTGCAGTGATGCGGGATCCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGGTCATCACCAAAGTaGCTGGCCGTTTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGSSPK*LAVCFP
Trigger: TGGAAAACAAACGGCCAGGCACTTTGGTGATGACCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAATCTCTCTGGTTGTaGTCAGAACTCCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQSLWL*SELQQC
Trigger: GCACTGCTGGAGTTCTGAGCACAACCAGAGAGATTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTGCAGAGGTTCATTTaGCACGATGATGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLQRFI*HDDDWK
Trigger: CTTCCAGTCATCATCGTGGCAAATGAACCTCTGCAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATCCTGGCAGACACTTaGATAAGAAAGGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFILADT*IRKAAE
Trigger: CTCTGCAGCCTTTCTTATGCAAGTGTCTGCCAGGAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGTCCAAGCGCCCTTTaGCTTCTAATGATAAGGCAG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSPSAL*LLMIRQ
Trigger: CTGCCTTATCATTAGAAGGCAAAGGGCGCTTGGACT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCAATTAGAAAAGTGTaGCAGTGGCCGTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPIRKV*QWPSAT
Trigger: TGTTGCAGACGGCCACTGGCACACTTTTCTAATTGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTTGGGCATCTCGATGTaGTTGATTGGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLGISM*LIGWNS
Trigger: GGAATTCCACCCAATCAAGCACATCGAGATGCCCAA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGCTGGTAAGTCAAACTaGTTGCTCCTAAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSAGKSN*LLLRAW
Trigger: CCATGCCCTTAGGAGCAAGCAGTTTGACTTACCAGC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGATTCCAGTGGAATCTaGCCAATCGGCTGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSDSSGI*PIGCFR
Trigger: CCTAAAGCAGCCGATTGGGCAGATTCCACTGGAATC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAAAGTCCCTGCTTGCTaGCCTAGCTTCATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISKVPAC*PSFMGS
Trigger: ACTGCCCATGAAGCTAGGGCAGCAAGCAGGGACTTT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTGAAAGTCCCTGCTTaGTGCCCTAGCTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILKVPA*CPSFMG
Trigger: GCCCATGAAGCTAGGGCAGCAAGCAGGGACTTTCAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGAGTGCCTGGAGGTTaGTCTTCCAGCACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRVPGG*SSSTWN
Trigger: GTTCCAAGTGCTGGAAGAGCAACCTCCAGGCACTCT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGTTCGGCACTTTGCTaGTTTGCACTTCAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGSALC*FALQSG
Trigger: GCCACTTTGAAGTGCAAAGCAGCAAAGTGCCGAACC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGAAAATGCTGTGACCTaGCTGCCAATTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSENAVT*LPILHH
Trigger: GTGGTGGAGAATTGGCAGGCAGGTCACAGCATTTTC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTACAGCACTTACTTTaGCCACAAACGACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILQHLL*PQTTQP
Trigger: GGGCTGGGTCGTTTGTGGGCAAAGTAAGTGCTGTAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGTAATCCATACATGTaGCACCATGTTGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSNPYM*HHVGMG
Trigger: GCCCATGCCAACATGGTGGCACATGTATGGATTACT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCTAGCAGTGAATATTTaGAGCGGCGTTCCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLAVNI*SGVPCP
Trigger: TGGACAGGGAACGCCGCTCCAAATATTCACTGCTAG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCATCCGTGGCTAAAATaGCTGCTACCAAAGAACCAG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFHPWLK*LLPKNQ
Trigger: CTGGTTCTTTGGTAGCAGCCATTTTAGCCACGGATG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCAGAGTCATCATCCGTaGCTAAAATGGCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFQSHHP*LKWLLP
Trigger: TGGTAGCAGCCATTTTAGCCACGGATGATGACTCTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGGAGGTATCAGTTCTaGGTGTGCTGCCTCGATCTG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISWRYQF*VCCLDL
Trigger: CAGATCGAGGCAGCACACCCAGAACTGATACCTCCA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGAAACCACCGTCTCTaGCCTCTATCCATACAACAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGNHRL*PLSIQH
Trigger: ATGTTGTATGGATAGAGGCCAGAGACGGTGGTTTCC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCACATGAGTTCCTATTaGGACCCCTTCACTGATCTG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFHMSSY*DPFTDL
Trigger: CAGATCAGTGAAGGGGTCCCAATAGGAACTCATGTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAAAACCTGCTCCAGCTaGGGATGGAGTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSKTCSS*GWSLSQ
Trigger: TTGACTCAGACTCCATCCCCAGCTGGAGCAGGTTTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGGAGATCAGGGTCAGTaGACTGAAGGGTCATCACCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISGDQGQ*TEGSSP
Trigger: TGGTGATGACCCTTCAGTCCACTGACCCTGATCTCC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTCTGTCAATCTCTCTaGTTGTGCTCAGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLCQSL*LCSELQ
Trigger: CTGGAGTTCTGAGCACAACCAGAGAGATTGACAGAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATCACAAGTACCCCCTaGAATACTGAAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFITSTP*NTEEAG
Trigger: ACCAGCCTCTTCAGTATTCCAGGGGGTACTTGTGAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGCTTTCAAAGAAGGTaGCTACGCCACTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFCFQRR*LRHWDS
Trigger: TGAATCCCAGTGGCGTAGCCACCTTCTTTGAAAGCA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAGGTTCCACCACTGTaGCAAGGTGATGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQVPPL*QGDGRH
Trigger: ATGTCTTCCATCACCTTGCCACAGTGGTGGAACCTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCTCTTTGGGATTTTTaGCCTTCTTCCCCCTGCACT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPLWDF*PSSPCT
Trigger: AGTGCAGGGGGAAGAAGGCCAAAAATCCCAAAGAGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATGCCAAAGGGGCGCTaGGGATGGTTTCTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIMPKGR*GWFLSC
Trigger: ACAACTCAGAAACCATCCCCAGCGCCCCTTTGGCAT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTGCTCCTAAGGGCATaGGGGATTGCCTTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLLLRA*GIALQS
Trigger: GCTTTGCAAGGCAATCCCCCATGCCCTTAGGAGCAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGTGGCTTAGGGAGCTaGTTCTCAAACCTTGACCAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSGLGS*FSNLDH
Trigger: ATGGTCAAGGTTTGAGAACCAGCTCCCTAAGCCACT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTTGGAGAAAGGGGCTaGACTGTGTCGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISFGERG*TVSRQR
Trigger: CCTCTGTCTCGACACAGTCCAGCCCCTTTCTCCAAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGAAGAAGACCTCCCATaGTCTGCACTGCAGATACTT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFEEDLP*SALQIL
Trigger: AAGTATCTGCAGTGCAGACCATGGGAGGTCTTCTTC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCTTGTTCTAGACAGTaGCCTTCTGCAGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPCSRQ*PSAVLL
Trigger: GAGGAGGACTGCAGAAGGCCACTGTCTAGAACAAGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGAGGATTCTGGAGCTaGAATGCCATCCGCTGGATT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSRGFWS*NAIRWI
Trigger: AATCCAGCGGATGGCATTCCAGCTCCAGAATCCTCT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAAAAGCTGGAGGCGATaGAATTCCTGGAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIKSWRR*NSWSPH
Trigger: GTGGGGACTCCAGGAATTCCATCGCCTCCAGCTTTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCAGGGTCCACAGCTTTaGCCTGGAAAATGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIQGPQL*PGKCCD
Trigger: GTCACAGCATTTTCCAGGCCAAAGCTGTGGACCCTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGCTCCCGGTCCAGAATaGCTGCGGTCTGAATTATAC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIAPGPE*LRSELY
Trigger: GTATAATTCAGACCGCAGCCATTCTGGACCGGGAGC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATTCGCATAGCAAGGTaGCAGTGTTCTGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSIRIAR*QCSGDN
Trigger: GTTGTCCCCAGAACACTGCCACCTTGCTATGCGAAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTCATATCCGAGGACTaGAGACCATCATCAGCACGA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLISED*RPSSAR
Trigger: TCGTGCTGATGATGGTCTTCAGTCCTCGGATATGAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCCAAGGCTATCACCTaGAGCAATGCTATAAGTCAA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPKAIT*SNAISQ
Trigger: TTGACTTATAGCATTGCTTCAGGTGATAGCCTTGGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTTGAGCAGTGCTTGTaGATCTGGAGGCTGGAATCT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILEQCL*IWRLES
Trigger: AGATTCCAGCCTCCAGATTCACAAGCACTGCTCAAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGTCCAGTTCTCCAGTaGGCCTCACTTCACCATCAA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCPVLQ*ASLHHQ
Trigger: TTGATGGTGAAGTGAGGCTCACTGGAGAACTGGACA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGAAGAGAGAGATGGTTaGCCTTTGTCTGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIEERDG*PLSVAT
Trigger: GGTGGCTACAGACAAAGGTCAACCATCTCTCTCTTC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCCAGTAGAACAATGCTaGCCGTGGAGGTATCAGTTC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISPVEQC*PWRYQF
Trigger: GAACTGATACCTCCACGGTCAGCATTGTTCTACTGG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGGTTGATCGTGAACTaGGAGTTTCCACCGATGATC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGLIVN*EFPPMI
Trigger: GATCATCGGTGGAAACTCTCAGTTCACGATCAACCC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGAGATGGGATGTGAGTaGCATATGGGTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSEMGCE*HMGDAE
Trigger: TTCAGCATCACCCATATGTCACTCACATCCCATCTC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCAAAATCCAGAGGTTaGCTAATAGACACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSKSRG*LIDTCP
Trigger: AGGGCAGGTGTCTATTAGTCAACCTCTGGATTTTGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTTACTGAAGTACTCTaGGACGGGGACCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSFTEVL*DGDPLS
Trigger: AGACAAAGGGTCCCCGTCTCAGAGTACTTCAGTAAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCAGGGAGGATGCTACTaGAATCCACCCCGTATCATT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIQGGCY*NPPRII
Trigger: AATGATACGGGGTGGATTTCAGTAGCATCCTCCCTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGCACTCATGTGGCTTTaGGAGAATTCAGGTGTATGG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSALMWL*ENSGVW
Trigger: CCATACACCTGAATTCTCTCAAAGCCACATGAGTGC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCATTCCCTGATCCGATaGAGTAAGAAAACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSHSLIR*SKKTCS
Trigger: GGAGCAGGTTTTCTTACTTCATCGGATCAGGGAATG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCTGTGGAAGACATTTaGGGAACACCAGAATCCTTG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPVEDI*GTPESL
Trigger: CAAGGATTCTGGTGTTCCTCAAATGTCTTCCACAGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCACCGTCCGAGACTGTaGAGGATTGTCATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIHRPRL*RIVILV
Trigger: GACCAAAATGACAATCCTTCACAGTCTCGGACGGTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTCGTGACTGTGCTGTaGACTCCATCATTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILVTVL*TPSLLR
Trigger: CCTTAGCAATGATGGAGTTCACAGCACAGTCACGAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTCGTGACTGTGCTGTaGACTCCATCATTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLVTVL*TPSLLR
Trigger: CCTTAGCAATGATGGAGTTCACAGCACAGTCACGAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGAGAAGGATCTCTTTaGTGCTTTCAAAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGEGSL*CFQRRW
Trigger: CCACCTTCTTTGAAAGCATCAAAGAGATCCTTCTCC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTGCACACAGGAGTCATaGTCCACAGATTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSCTQES*STDSTF
Trigger: AAAGGTGGAATCTGTGGATCATGACTCCTGTGTGCA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTACGTGTCCTCTTCTCTaGAGGATTGGTTCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFTCPLL*RIGSRD
Trigger: ATCTCTAGAACCAATCCTTCAGAGAAGAGGACACGT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGGCCACCGAAGTCCTaGGTAGGGTGGATAATATCT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRPPKS*VGWIIS
Trigger: AGATATTATCCACCCTACTCAGGACTTCGGTGGCCT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGCTATGCTTCCCGCTaGAAGGAAGACTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISYASR*KEDFLH
Trigger: GTGGAGAAAGTCTTCCTTTCAGCGGGAAGCATAGCT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGCTTGTAGTGTTGAATaGTGTCTGCATCCGAAGGGG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIACSVE*CLHPKG
Trigger: CCCCTTCGGATGCAGACATCATTCAACACTACAAGC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCATTTCTGAGCAAGTaGAAGATTCATGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPFLSK*KIHGSH
Trigger: GTGACTCCCATGAATCTTTCACTTGCTCAGAAATGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAGAGTACCATGCCATTaGCACCTTCATCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRVPCH*HLHQGP
Trigger: TGGACCCTGATGAAGGTGTCAATGGCATGGTACTCT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGTGCAGTCACTGAAATaGCAGATGTACCGATGGGAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSVQSLK*QMYRWE
Trigger: TTCCCATCGGTACATCTGTCATTTCAGTGACTGCAC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATGACACTGCTGCCATaGCCAGTAATCCATACATGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFMTLLP*PVIHTC
Trigger: ACATGTATGGATTACTGGTCATGGCAGCAGTGTCAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTGCTCGACACTCATTaGTCCCCGCACTTTAGTTCG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILLDTH*SPHFSS
Trigger: CGAACTAAAGTGCGGGGATCAATGAGTGTCGAGCAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTCCCCCACCATCTTCTaGTCGAACAGTGAGGATATA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSPTIF*SNSEDI
Trigger: TATATCCTCACTGTTCGAGCAGAAGATGGTGGGGGA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTATCAGTTCTGGGTGTaGTGCCTCGATCTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIYQFWV*CLDLLP
Trigger: AGGCAACAGATCGAGGCAGCACACCCAGAACTGATA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTATCAGTTCTGGGTGTaGTGCCTCGATCTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISYQFWV*CLDLLP
Trigger: AGGCAACAGATCGAGGCAGCACACCCAGAACTGATA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGCTCTCAGGGATGGTTaGACTCATGTGGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISALRDG*THVALR
Trigger: TCTCAAAGCCACATGAGTGCAACCATCCCTGAGAGC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCAGTAACCAGTTCTTaGAACCCATCCTCCATCTAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFAVTSS*NPSSIY
Trigger: ATAGATGGAGGATGGGTTGCAAGAACTGGTTACTGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGGTCATCACCAAAGTaGCTGGCCGTTTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGSSPK*LAVCFP
Trigger: TGGAAAACAAACGGCCAGGCACTTTGGTGATGACCC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCAGTCAGATCAAACGTaGCATCTGTGGACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIQSDQT*HLWTLA
Trigger: AGCCAAGGTCCACAGATGGCACGTTTGATCTGACTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAGTCAGATCAAACGTaGCATCTGTGGACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQSDQT*HLWTLA
Trigger: AGCCAAGGTCCACAGATGGCACGTTTGATCTGACTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATCCTGGCAGACACTTaGATAAGAAAGGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSILADT*IRKAAE
Trigger: CTCTGCAGCCTTTCTTATGCAAGTGTCTGCCAGGAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGCCATCTGGGCAGCTaGATGAAAATCCTCCCACTA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISHLGS*MKILPL
Trigger: TAGTGGGAGGATTTTCATGCAGCTGCCCAGATGGCT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGGCCTTCCATTGACTaGAAACTCCATTATACACCC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRPSID*KLHYTP
Trigger: GGGTGTATAATGGAGTTTGCAGTCAATGGAAGGCCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCACCTCGTAAGCTTTaGCTTAACAAATATTCCCGC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFAPRKL*LNKYSR
Trigger: GCGGGAATATTTGTTAAGGCAAAGCTTACGAGGTGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCAATTAGAAAAGTGTaGCAGTGGCCGTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPIRKV*QWPSAT
Trigger: TGTTGCAGACGGCCACTGGCACACTTTTCTAATTGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTGGGCATCTCGATGTaGTTGATTGGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLGISM*LIGWNS
Trigger: GGAATTCCACCCAATCAAGCACATCGAGATGCCCAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGTGTTGAATGATGTCTaGATCCGAAGGGGCGATGCT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIVLNDV*IRRGDA
Trigger: AGCATCGCCCCTTCGGATGCAGACATCATTCAACAC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATTTTGGTGTGTGGCTaGGGAACTGCTTGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFILVCG*GTACSV
Trigger: AACACTACAAGCAGTTCCGCAGCCACACACCAAAAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTCCCTTATAGGAAGATaGAATTCCCTTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSLIGR*NSLAGL
Trigger: CAGCCCAGCAAGGGAATTGCATCTTCCTATAAGGGA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGACCTCCCATGGTCTaGACTGCAGATACTTGGGTT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRPPMV*TADTWV
Trigger: AACCCAAGTATCTGCAGTGCAGACCATGGGAGGTCT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTCTGGAGCTGGAATaGCATCCGCTGGATTCCTTG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIILELE*HPLDSL
Trigger: CAAGGAATCCAGCGGATGGCATTCCAGCTCCAGAAT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTCACACATACTGTTCTaGTTCCCCATCTTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSHILF*FPIFGD
Trigger: GTCCCCAAAGATGGGGAAGCAGAACAGTATGTGTGA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGCACTCAGAAACTTTaGTCGACACTCATTGATCCC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSTQKL*STLIDP
Trigger: GGGATCAATGAGTGTCGAGCAAAGTTTCTGAGTGCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTACTTCAAAGTGGCGCTaGTCATTGCCCCCGAGAATT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSITSKWR*SLPPRI
Trigger: AATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGAGATCCATGGTGGATaGAGACACACTACCCACATG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISEIHGG*RHTTHM
Trigger: CATGTGGGTAGTGTGTCTGCATCCACCATGGATCTC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTTTGGCCTGGAAAATaGTGTGACCTGCCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLWPGK*CDLPAN
Trigger: ATTGGCAGGCAGGTCACAGCATTTTCCAGGCCAAAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCACTAAGGGGTTCCACTaGTCTGTCAGAAGCAACAAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSTKGFH*SVRSNN
Trigger: GTTGTTGCTTCTGACAGAGCAGTGGAACCCCTTAGT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTCCCCACTGATGGCATaGAACTCAAAATCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISPLMA*NSKSGC
Trigger: GCAGCCAGATTTTGAGTTGCATGCCATCAGTGGGGA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCGGTCCAGAATGGCTaGGGTCTGAATTATACCAGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPVQNG*GLNYTS
Trigger: ACTGGTATAATTCAGACCGCAGCCATTCTGGACCGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGTAATCCATACATGTaGCACCATGTTGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSNPYM*HHVGMG
Trigger: GCCCATGCCAACATGGTGGCACATGTATGGATTACT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTAGCAGTGAATATTTaGAGCGGCGTTCCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLAVNI*SGVPCP
Trigger: TGGACAGGGAACGCCGCTCCAAATATTCACTGCTAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCATCCGTGGCTAAAATaGCTGCTACCAAAGAACCAG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSHPWLK*LLPKNQ
Trigger: CTGGTTCTTTGGTAGCAGCCATTTTAGCCACGGATG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAGAGTCATCATCCGTaGCTAAAATGGCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQSHHP*LKWLLP
Trigger: TGGTAGCAGCCATTTTAGCCACGGATGATGACTCTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAATCTAACTGTCCATTaGGTCCACTGTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFNLTVH*VHCPCP
Trigger: TGGACAAGGACAGTGGACCCAATGGACAGTTAGATT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATGGACCCAATGCTATaGCTCTCAGGGATGGTTGCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISMDPML*LSGMVA
Trigger: TGCAACCATCCCTGAGAGCCATAGCATTGGGTCCAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCACATGAGTTCCTATTaGGACCCCTTCACTGATCTG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSHMSSY*DPFTDL
Trigger: CAGATCAGTGAAGGGGTCCCAATAGGAACTCATGTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAAAGGGACCTTGATTTaGAGGGAGATCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSKGTLI*REIRVS
Trigger: ACTGACCCTGATCTCCCTCCAAATCAAGGTCCCTTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCTCTGTCAATCTCTCTaGTTGTGCTCAGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLCQSL*LCSELQ
Trigger: CTGGAGTTCTGAGCACAACCAGAGAGATTGACAGAG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATCACAAGTACCCCCTaGAATACTGAAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSITSTP*NTEEAG
Trigger: ACCAGCCTCTTCAGTATTCCAGGGGGTACTTGTGAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAAACGTGCCATCTGTaGACCTTGGCTGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQTCHL*TLAGNS
Trigger: TGAATTCCCAGCCAAGGTCCACAGATGGCACGTTTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGGTGGCTACGCCACTaGGATTCACATACTGATTAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRWLRH*DSHTDY
Trigger: ATAATCAGTATGTGAATCCCAGTGGCGTAGCCACCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTGCCACGATGATGACTaGAAGACTCTCACGGCTTTT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSCHDDD*KTLTAF
Trigger: AAAAGCCGTGAGAGTCTTCCAGTCATCATCGTGGCA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTACAGTTGAAGCTTCCTaGAAAATTCTGGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFTVEAS*KILADG
Trigger: GCCATCTGCCAGAATTTTCCAGGAAGCTTCAACTGT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCATTCCTGCTCTCCTaGCAATCACAGTGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPFLLS*QSQCEN
Trigger: ATTTTCACACTGTGATTGCCAGGAGAGCAGGAATGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAAAAGGCTCCAACATaGCACCTCGTAAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQKAPT*HLVSFA
Trigger: GGCAAAGCTTACGAGGTGCCATGTTGGAGCCTTTTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTCTTCCCCCTGCACTaGTTACACAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISFFPLH*LHRIRL
Trigger: TAGCCTGATCCTGTGTAACCAGTGCAGGGGGAAGAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTCTTCCCCCTGCACTaGTTACACAGGATCAGGCTA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIFFPLH*LHRIRL
Trigger: TAGCCTGATCCTGTGTAACCAGTGCAGGGGGAAGAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCTCTTTGGGATTTTTaGCCTTCTTCCCCCTGCACT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPLWDF*PSSPCT
Trigger: AGTGCAGGGGGAAGAAGGCCAAAAATCCCAAAGAGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAAGGGGCGATGCTGCTaGCGTTGTCAATGTCATAGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIKGRCC*RCQCHS
Trigger: ACTATGACATTGACAACGCCAGCAGCATCGCCCCTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAACCATGTGATGCCATaGCCTGAGGACTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISNHVMP*PEDSCF
Trigger: GAAGCAAGAGTCCTCAGGCCATGGCATCACATGGTT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAATAGAAAGTCCGACTaGAGGAGAAGATTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFNRKSD*RRRFQW
Trigger: CCACTGGAATCTTCTCCTCCAGTCGGACTTTCTATT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTGGAATGCCATCCGCTaGATTCCTTGTTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSWNAIR*IPCSRQ
Trigger: CTGTCTAGAACAAGGAATCCAGCGGATGGCATTCCA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAGAGGATTCTGGAGCTaGAATGCCATCCGCTGGATT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRGFWS*NAIRWI
Trigger: AATCCAGCGGATGGCATTCCAGCTCCAGAATCCTCT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCCATCTTTGGGGACTaGTTTAGTTGTCCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPIFGD*FSCPSF
Trigger: AAAGCTGGGACAACTAAACCAGTCCCCAAAGATGGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGTGTCTAAGATGACTTaGCGTCCGCTGCTACTGTCT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISVSKMT*RPLLLS
Trigger: AGACAGTAGCAGCGGACGCCAAGTCATCTTAGACAC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCAGTTCTGTCCCTGTTaGGGCATTCTCAACCACAGA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIQFCPC*GILNHR
Trigger: TCTGTGGTTGAGAATGCCCCAACAGGGACAGAACTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTGACTGAATACAGGTaGGTTGTCTTGAGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLTEYR*VVLSVQ
Trigger: TTGGACACTCAAGACAACCCACCTGTATTCAGTCAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGCTGCCCAGTGACCTaGTTGATAGCAAACATACCT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSCPVT*LIANIP
Trigger: AGGTATGTTTGCTATCAACCAGGTCACTGGGCAGCT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAATATAATACTCCACTaGGGCCTCAGATCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSNIILH*GLRSSG
Trigger: CCCAGAGGATCTGAGGCCCCAGTGGAGTATTATATT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGAATCCACACCACTTTaGCAGGAACCACCATTAAAG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFESTPL*QEPPLK
Trigger: CTTTAATGGTGGTTCCTGCCAAAGTGGTGTGGATTC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAGGTGGCAGTGTTCTaGGGACAACATGCAATCATT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKVAVF*GQHAII
Trigger: AATGATTGCATGTTGTCCCCAGAACACTGCCACCTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCTGGGTCAGTTGCTTaGGCTTTGAAAACAACAGTA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSGSVA*ALKTTV
Trigger: TACTGTTGTTTTCAAAGCTCAAGCAACTGACCCAGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCTCTTGCCACCACCTaGAGAATTGTTCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSLATT*RIVLGS
Trigger: ACTACCCAGAACAATTCTTCAGGTGGTGGCAAGAGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAATCATGACTTTTACTaGAGTACTCTGAGACGGGGA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFNHDFY*STLRRG
Trigger: TCCCCGTCTCAGAGTACTTCAGTAAAAGTCATGATT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGGGCACTAAATATCTaGGAAAACCTAGGGGCATTA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFWALNI*ENLGAL
Trigger: TAATGCCCCTAGGTTTTCTCAGATATTTAGTGCCCA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTAAAGGTCTGCTTATaGCAATATCCCCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLKVCL*QYPLCW
Trigger: CCAGCACAGGGGATATTGTCATAAGCAGACCTTTAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCTGTTGCAAATACCTaGGTTACTTTGGAGCCAATC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSVANT*VTLEPI
Trigger: GATTGGCTCCAAAGTAACTCAGGTATTTGCAACAGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGTAGTTTTCCTCAGTaGCAGTTATGTGAACAGTTG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGSFPQ*QLCEQL
Trigger: CAACTGTTCACATAACTGTCACTGAGGAAAACTACC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGCACTCATGTGGCTTTaGGAGAATTCAGGTGTATGG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISALMWL*ENSGVW
Trigger: CCATACACCTGAATTCTCTCAAAGCCACATGAGTGC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAAATCCAAGAAGCCTTaGGTGGTTATGACTCCTGTG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSKSKKP*VVMTPV
Trigger: CACAGGAGTCATAACCACTCAAGGCTTCTTGGATTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGTCCAGTCTTCTTATTaGTCTGGAAACCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFVQSSY*SGNPSF
Trigger: GAAAGAAGGGTTTCCAGATCAATAAGAAGACTGGAC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTGAGTCAAAGGCACTaGCAAAGGTCACATGAGTTC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLSQRH*QRSHEF
Trigger: GAACTCATGTGACCTTTGTCAGTGCCTTTGACTCAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTGAGTCAAAGGCACTaGCAAAGGTCACATGAGTTC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILSQRH*QRSHEF
Trigger: GAACTCATGTGACCTTTGTCAGTGCCTTTGACTCAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTGCACACAGGAGTCATaGTCCACAGATTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSICTQES*STDSTF
Trigger: AAAGGTGGAATCTGTGGATCATGACTCCTGTGTGCA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCACCACTGTGGCAAGGTaGTGGAAGACATTCATCTAT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSTTVAR*WKTFIY
Trigger: ATAGATGAATGTCTTCCATCACCTTGCCACAGTGGT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCTTCTTCATGGTGGTaGGCTTATATGTACCACTGC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPSSWW*AYMYHC
Trigger: GCAGTGGTACATATAAGCTCACCACCATGAAGAAGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAACTGCCACATTACTaGCAGTACAATATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKLPHY*QYNILA
Trigger: AGCCAGGATATTGTACTGTCAGTAATGTGGCAGTTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCCAGAGGCCTTCCATTaGCTGCAAACTCCATTATAC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISPEAFH*LQTPLY
Trigger: GTATAATGGAGTTTGCAGTCAATGGAAGGCCTCTGG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCAGAGGCCTTCCATTaGCTGCAAACTCCATTATAC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPEAFH*LQTPLY
Trigger: GTATAATGGAGTTTGCAGTCAATGGAAGGCCTCTGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGCTGGGGATGGTTTCTaGGTTGTGAGGAATATCAGT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISAGDGF*VVRNIS
Trigger: ACTGATATTCCTCACAACTCAGAAACCATCCCCAGC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAACACTCGAAGGAGCTaGGATACTGATAGAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISNTRRS*DTDRVC
Trigger: GCACACTCTATCAGTATCTCAGCTCCTTCGAGTGTT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTACAGGTGGGTTGTCTTaGGTGTCCAATACAGTGATG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISTGGLS*VSNTVM
Trigger: CATCACTGTATTGGACACTCAAGACAACCCACCTGT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTACACTCTCTATTGCCTaGAGGAAATGGGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISTLSIA*RKWGEL
Trigger: CAACTCTCCCCATTTCCTTCAGGCAATAGAGAGTGT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATCAGCATTGTCACCTaGATCGGAATCAGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSISIVT*IGISCS
Trigger: ACTGCAACTGATTCCGATTCAGGTGACAATGCTGAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGTCATGTGCAGTCACTaGAATGACAGATGTACCGAT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSVMCSH*NDRCTD
Trigger: ATCGGTACATCTGTCATTTCAGTGACTGCACATGAC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCACAGTATTTCCCAGTaGGTCCCTCTTTGCAATGAC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISHSISQ*VPLCND
Trigger: GTCATTGCAAAGAGGGACTCACTGGGAAATACTGTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCACAGTATTTCCCAGTaGGTCCCTCTTTGCAATGAC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIHSISQ*VPLCND
Trigger: GTCATTGCAAAGAGGGACTCACTGGGAAATACTGTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGTGACGAGAGCATTTaGACCCTCATCAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCDESI*TLISIH
Trigger: ATGGATGCTGATGAGGGTGCAAATGCTCTCGTCACA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCGGATTCTGGGTCGATaGGAAAACTATCATCAGCTC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRILGR*ENYHQL
Trigger: GAGCTGATGATAGTTTTCGCATCGACCCAGAATCCG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCCCCCACCATCTTCTaGTCGAACAGTGAGGATATA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSPTIF*SNSEDI
Trigger: TATATCCTCACTGTTCGAGCAGAAGATGGTGGGGGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCCTTCATCTCCATCTaGTGCGAACACTTGTATTAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFAFISI*CEHLYY
Trigger: ATAATACAAGTGTTCGCAGCAGATGGAGATGAAGGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGAACCTGTCCATTTGTaGCTTCATCTCCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIEPVHL*LHLHLL
Trigger: CAGCAGATGGAGATGAAGGCACAAATGGACAGGTTC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCGATCATCATCTCTTaGCACCACCTGAAGAATTGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSIIIS*HHLKNC
Trigger: ACAATTCTTCAGGTGGTGGCAAGAGATGATGATCGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCACCCAGAATCATGTaGGGAAACTCGAATTCTGTA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPPRIM*GNSNSV
Trigger: TACAGAATTCGAGTTTCCGCACATGATTCTGGGTGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAAGCCATTCATCGCTaGATCTCTATCTCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQAIHR*ISISCR
Trigger: TCTGCAAGAGATAGAGATGCAGCGATGAATGGCTTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAATGGGTGGGTCATTTaGATCAAGCACGGTGACATT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSNGWVI*IKHGDI
Trigger: AATGTCACCGTGCTTGATGCAAATGACCCACCCATT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGTGATCTGTCCTGTCTaGGGATTAATAGAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFVICPV*GLIEKA
Trigger: TGCCTTTTCTATTAATCCGCAGACAGGACAGATCAC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTATGCACTGTACAGTTaGACAGCAGTCCCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISYALYS*TAVPKP
Trigger: AGGCTTAGGGACTGCTGTGCAACTGTACAGTGCATA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTATGCACTGTACAGTTaGACAGCAGTCCCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIYALYS*TAVPKP
Trigger: AGGCTTAGGGACTGCTGTGCAACTGTACAGTGCATA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTGCAGAGGTTCATTTaGCACGATGATGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILQRFI*HDDDWK
Trigger: CTTCCAGTCATCATCGTGGCAAATGAACCTCTGCAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGTCCAAGCGCCCTTTaGCTTCTAATGATAAGGCAG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISPSAL*LLMIRQ
Trigger: CTGCCTTATCATTAGAAGGCAAAGGGCGCTTGGACT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGTGCCAGTGGCCGTCTaGAACATATACTTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIVPVAV*NIYFRN
Trigger: ATTCCTGAAGTATATGTTGCAGACGGCCACTGGCAC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCCTTCTTCATTTGCTaGTGCTTTTTCTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFAFFIC*CFFWKR
Trigger: TCTCTTCCAGAAAAAGCAGCAGCAAATGAAGAAGGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTGCCCTCGCTATCTCTaGTTTTATTGTCCCGTGTCA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSICPRYL*FYCPVS
Trigger: TGACACGGGACAATAAAAGCAGAGATAGCGAGGGCA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGCCCTCGCTATCTCTaGTTTTATTGTCCCGTGTCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCPRYL*FYCPVS
Trigger: TGACACGGGACAATAAAAGCAGAGATAGCGAGGGCA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGTACAGGGCTCCGGTaGTACTGTTTATGGCAAACA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCTGLR*YCLWQT
Trigger: TGTTTGCCATAAACAGTAGCACCGGAGCCCTGTACA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTACCATCCCAGTCCATTaGCAGAGACAATGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISTIPVH*QRQCCN
Trigger: GTTACAGCATTGTCTCTGGCAATGGACTGGGATGGT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTTGCTGTGGTAAGCTaGCCAGTGACCTGGTTGATA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISFAVVS*PVTWLI
Trigger: TATCAACCAGGTCACTGGGCAGCTTACCACAGCAAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGACACCCATGTCAGATaGCAAGATCTCTATTTGGTA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFDTHVR*QDLYLV
Trigger: TACCAAATAGAGATCTTGGCATCTGACATGGGTGTC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAGATCTCCGGATTCTaGGTCGATGCGAAAACTATC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQISGF*VDAKTI
Trigger: GATAGTTTTCGCATCGACCCAGAATCCGGAGATCTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAGAGTACACGGGTCTaGAAAATTTGGGTGTATGGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKSTRV*KIWVYG
Trigger: ACCATACACCCAAATTTTCCAGACCCGTGTACTCTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGTTTGGGCCACTATCTaGGTCAGTTGCTTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISVWATI*VSCLSF
Trigger: AAAGCTCAAGCAACTGACCCAGATAGTGGCCCAAAC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGATTTGTCCTGTCGATaGGTTGATCGTGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSDLSCR*VDRELR
Trigger: TCTCAGTTCACGATCAACCCATCGACAGGACAAATC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGATGTGAGTGACATATaGGTGATGCTGAAATCTTGG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFDVSDI*VMLKSW
Trigger: CCAAGATTTCAGCATCACCCATATGTCACTCACATC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAAGACAAAGGAACCTaGAAGAGTAGGAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKDKGT*KSRRWD
Trigger: ATCCCATCTCCTACTCTTCCAGGTTCCTTTGTCTTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGACAAGAGAGCTGACTaGTTGGTTTTCAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFDKRAD*LVFRKH
Trigger: ATGTTTCCTGAAAACCAACCAGTCAGCTCTCTTGTC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGAAACCACCGTCTCTaGCCTCTATCCATACAACAT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGNHRL*PLSIQH
Trigger: ATGTTGTATGGATAGAGGCCAGAGACGGTGGTTTCC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAATCTAACTGTCCATTaGGTCCACTGTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSNLTVH*VHCPCP
Trigger: TGGACAAGGACAGTGGACCCAATGGACAGTTAGATT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCATCACCAAAGTGCCTaGCCGTTTGTTTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIHHQSA*PFVFHD
Trigger: GTCATGGAAAACAAACGGCCAGGCACTTTGGTGATG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAAAGGGACCTTGATTTaGAGGGAGATCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIKGTLI*REIRVS
Trigger: ACTGACCCTGATCTCCCTCCAAATCAAGGTCCCTTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGAAGTAAGGGAGCAGTaGAAGCTGTCTAACACATCT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSEVREQ*KLSNTS
Trigger: AGATGTGTTAGACAGCTTCCACTGCTCCCTTACTTC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGCTGTTATCCACTGTaGCATTGGAAAATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFCCYPL*HWKIQQ
Trigger: TTGCTGGATTTTCCAATGCCACAGTGGATAACAGCA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGCTTTCAAAGAAGGTaGCTACGCCACTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCFQRR*LRHWDS
Trigger: TGAATCCCAGTGGCGTAGCCACCTTCTTTGAAAGCA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGCCACGATGATGACTaGAAGACTCTCACGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCHDDD*KTLTAF
Trigger: AAAAGCCGTGAGAGTCTTCCAGTCATCATCGTGGCA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGAAAATTCTGGCAGATaGCACCATTCTTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSENSGR*HHSCKD
Trigger: GTCCTTGCAAGAATGGTGCCATCTGCCAGAATTTTC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCATTCCTGCTCTCCTaGCAATCACAGTGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPFLLS*QSQCEN
Trigger: ATTTTCACACTGTGATTGCCAGGAGAGCAGGAATGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTCGATGTGCTTGATTaGGTGGAATTCCTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLDVLD*VEFLQV
Trigger: CACTTGGAGGAATTCCACCCAATCAAGCACATCGAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCTTTCAATGATATCTaGTTTTGGGTTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPFNDI*FWVPFR
Trigger: CCTGAAGGGAACCCAAAACCAGATATCATTGAAAGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGTGGCTTAGGGAGCTaGTTCTCAAACCTTGACCAT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISGLGS*FSNLDH
Trigger: ATGGTCAAGGTTTGAGAACCAGCTCCCTAAGCCACT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGAAGAAGACCTCCCATaGTCTGCACTGCAGATACTT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIEEDLP*SALQIL
Trigger: AAGTATCTGCAGTGCAGACCATGGGAGGTCTTCTTC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCCATCTTTGGGGACTaGTTTAGTTGTCCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPIFGD*FSCPSF
Trigger: AAAGCTGGGACAACTAAACCAGTCCCCAAAGATGGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTCTTTCCCAAAAGCTaGAGGCGATGGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISFFPKS*RRWNSW
Trigger: CCAGGAATTCCATCGCCTCCAGCTTTTGGGAAAGAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCATCTATGGTAAAGTaGTTGCCTCTTGGCATCTGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSSMVK*LPLGIC
Trigger: ACAGATGCCAAGAGGCAACCACTTTACCATAGATGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCACGTTTGTGCCAATaGGTTCTCCTTCCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSRLCQ*VLLPSK
Trigger: TTTTGAAGGAAGGAGAACCCATTGGCACAAACGTGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTTCTGCTCGAACAGTaGGGATATAATATTGCTGTA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLLLEQ*GYNIAV
Trigger: TACAGCAATATTATATCCTCACTGTTCGAGCAGAAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCCAAGGCTATCACCTaGAGCAATGCTATAAGTCAA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPKAIT*SNAISQ
Trigger: TTGACTTATAGCATTGCTTCAGGTGATAGCCTTGGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCAATGGTCCCAATACTaGACTTGTTTCCCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIQWSQY*TCFPKG
Trigger: ACCCTTTGGGAAACAAGTTCAGTATTGGGACCATTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCTCAGGAATTGTTGTaGAATACGCTTTACTGGCAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPQELL*NTLYWQ
Trigger: TTGCCAGTAAAGCGTATTTCACAACAATTCCTGAGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTCAAAATCCAGAGGTTaGCTAATAGACACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISKSRG*LIDTCP
Trigger: AGGGCAGGTGTCTATTAGTCAACCTCTGGATTTTGA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTAAAGGTCTGCTTATaGCAATATCCCCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILKVCL*QYPLCW
Trigger: CCAGCACAGGGGATATTGTCATAAGCAGACCTTTAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTCAGTGACAGTTATGTaGACAGTTGCTTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSVTVM*TVAWEE
Trigger: TTCTTCCCAAGCAACTGTTCACATAACTGTCACTGA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTGCAGAAACAGTTCTaGCAATGGACCCAATGCTAT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLQKQF*QWTQCY
Trigger: ATAGCATTGGGTCCATTGTCAGAACTGTTTCTGCAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGAGGTCACTGTCAGATaGCTGTACAGTATACGCAAT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIEVTVR*LYSIRN
Trigger: ATTGCGTATACTGTACAGTCATCTGACAGTGACCTC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAAATCCAAGAAGCCTTaGGTGGTTATGACTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISKSKKP*VVMTPV
Trigger: CACAGGAGTCATAACCACTCAAGGCTTCTTGGATTT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATCAACAGCCAAAACTaGGAGATTATAGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFINSQN*EIIDGK
Trigger: CTTCCCATCTATAATCTCTCAGTTTTGGCTGTTGAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTTATATCTTCCAGGGTaGCTAATAAAGAGGCACTAC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLYLPG*LIKRHY
Trigger: GTAGTGCCTCTTTATTAGTCACCCTGGAAGATATAA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGGAGAAGGATCTCTTTaGTGCTTTCAAAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISGEGSL*CFQRRW
Trigger: CCACCTTCTTTGAAAGCATCAAAGAGATCCTTCTCC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTACCACTGTGGCAAGGTaGTGGAAGACATTCATCTAT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSITTVAR*WKTFIY
Trigger: ATAGATGAATGTCTTCCATCACCTTGCCACAGTGGT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGTGAAAATGTCCATCTaGCACCTTCTTCATGGTGGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIVKMSI*HLLHGG
Trigger: ACCACCATGAAGAAGGTGTCAGATGGACATTTTCAC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTACGTGTCCTCTTCTCTaGAGGATTGGTTCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISTCPLL*RIGSRD
Trigger: ATCTCTAGAACCAATCCTTCAGAGAAGAGGACACGT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCCATTTCTGAGCAAGTaGAAGATTCATGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISPFLSK*KIHGSH
Trigger: GTGACTCCCATGAATCTTTCACTTGCTCAGAAATGG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCATTCTCCTTAATGTaGGCAAAGTATTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSFSLM*AKYWTG
Trigger: CCCGGTCCAATACTTTGCTCACATTAAGGAGAATGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGAGTGTCCAATACAGTaGTGGTTACTATTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISECPIQ*WLLLPG
Trigger: ACCAGGCAATAGTAACCATCACTGTATTGGACACTC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGAATTCACAGGTTCTaGCTCAGAAAGGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRIHRF*LRKGDF
Trigger: GAAGTCACCCTTTCTGAGTCAGAACCTGTGAATTCT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGAATGGCTGCGGTCTaGATTATACCAGTATGTCGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRMAAV*IIPVCR
Trigger: ACGACATACTGGTATAATTCAGACCGCAGCCATTCT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATGACACTGCTGCCATaGCCAGTAATCCATACATGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIMTLLP*PVIHTC
Trigger: ACATGTATGGATTACTGGTCATGGCAGCAGTGTCAT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCCATGGCTGTCAGCTaGATAATCTTAGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSMAVS*IILEPS
Trigger: AGATGGCTCTAAGATTATGCAGCTGACAGCCATGGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTCCATGGCTGTCAGCTaGATAATCTTAGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISMAVS*IILEPS
Trigger: AGATGGCTCTAAGATTATGCAGCTGACAGCCATGGA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTACTATCTGGGTCAGTTaGTTGAGCTTTGAAAACAAC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFTIWVS*LSFENN
Trigger: GTTGTTTTCAAAGCTCAAGCAACTGACCCAGATAGT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAATCTGGAAAGTATTaGCAAGATTCCCACTTGCGA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQSGKY*QDSHLR
Trigger: TCGCAAGTGGGAATCTTGGCAATACTTTCCAGATTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCACCCAGAATCATGTaGGGAAACTCGAATTCTGTA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPPRIM*GNSNSV
Trigger: TACAGAATTCGAGTTTCCGCACATGATTCTGGGTGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAAGCCATTCATCGCTaGATCTCTATCTCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQAIHR*ISISCR
Trigger: TCTGCAAGAGATAGAGATGCAGCGATGAATGGCTTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGCAGTAACCAGTTCTTaGAACCCATCCTCCATCTAT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIAVTSS*NPSSIY
Trigger: ATAGATGGAGGATGGGTTGCAAGAACTGGTTACTGC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGACCTCATCTATATCTaGACCTCTAATGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSDLIYI*TSNAAK
Trigger: TTTGGCAGCATTAGAGGTGCAGATATAGATGAGGTC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAATGGGTGGGTCATTTaGATCAAGCACGGTGACATT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISNGWVI*IKHGDI
Trigger: AATGTCACCGTGCTTGATGCAAATGACCCACCCATT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCTATAACTGTGATATaGACAGTTCCTGTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSITVI*TVPVED
Trigger: GTCTTCCACAGGAACTGTGCATATCACAGTTATAGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCGAGACGAAGTAAGATaGTGTTATCCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRDEVR*CYPLWH
Trigger: ATGCCACAGTGGATAACAGCATCTTACTTCGTCTCG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCGAGACGAAGTAAGATaGTGTTATCCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRDEVR*CYPLWH
Trigger: ATGCCACAGTGGATAACAGCATCTTACTTCGTCTCG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTGCATAAGAAAGGCTaGAGAGGTTCATTTGCCACG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILHKKG*RGSFAT
Trigger: CGTGGCAAATGAACCTCTGCAGCCTTTCTTATGCAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGGCCTTCCATTGACTaGAAACTCCATTATACACCC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRPSID*KLHYTP
Trigger: GGGTGTATAATGGAGTTTGCAGTCAATGGAAGGCCT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGCACCTCGTAAGCTTTaGCTTAACAAATATTCCCGC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISAPRKL*LNKYSR
Trigger: GCGGGAATATTTGTTAAGGCAAAGCTTACGAGGTGC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATTTTGGTGTGTGGCTaGGGAACTGCTTGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISILVCG*GTACSV
Trigger: AACACTACAAGCAGTTCCGCAGCCACACACCAAAAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAGATGCAATTCCCTTaGTGGGCTGTTTCTATAGAA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKMQFP*WAVSIE
Trigger: TTCTATAGAAACAGCCCAGCAAGGGAATTGCATCTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTCAGGTTCGGCACTTTaGTGCTTTGCACTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISGSAL*CFALQS
Trigger: ACTTTGAAGTGCAAAGCAGCAAAGTGCCGAACCTGA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTCTATCAATCACATTTaGTGTGGTAAGCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSINHI*CGKLPS
Trigger: ACTGGGCAGCTTACCACAGCAAATGTGATTGATAGA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATTTACACTCTCTATTaGCTGAAGGAAATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFIYTLY*LKEMGR
Trigger: TCTCCCCATTTCCTTCAGGCAATAGAGAGTGTAAAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTGATATCACGTTTGTaGCAATGGGTTCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLISRL*QWVLLP
Trigger: AGGAAGGAGAACCCATTGGCACAAACGTGATATCAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGTTATTTCTACCTCTaGTCTCTGTGTTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFCYFYL*SLCSGK
Trigger: TTTCCCAGAACACAGAGAGCAGAGGTAGAAATAACA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGTCCGTTGGAAATACTaGTGGATTGTCATTGATATC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFVRWKY*WIVIDI
Trigger: GATATCAATGACAATCCACCAGTATTTCCAACGGAC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTCAATATAGCTGTTTaGGCCACTATCTGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILNIAV*ATIWVS
Trigger: ACTGACCCAGATAGTGGCCCAAACAGCTATATTGAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTCAATATAGCTGTTTaGGCCACTATCTGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLNIAV*ATIWVS
Trigger: ACTGACCCAGATAGTGGCCCAAACAGCTATATTGAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAACATCTGTTCCAGTTaGTGCATCCTCAGGAATTGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSNICSS*CILRNC
Trigger: ACAATTCCTGAGGATGCACCAACTGGAACAGATGTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGATTTGTCCTGTCGATaGGTTGATCGTGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIDLSCR*VDRELR
Trigger: TCTCAGTTCACGATCAACCCATCGACAGGACAAATC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAAAGACAAAGGAACCTaGAAGAGTAGGAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSKDKGT*KSRRWD
Trigger: ATCCCATCTCCTACTCTTCCAGGTTCCTTTGTCTTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGAGAGCTGACTGGTTaGTTTTCAGGAAACATGAAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSRELTG*FSGNMN
Trigger: GTTCATGTTTCCTGAAAACCAACCAGTCAGCTCTCT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTATGCACAGTTCCTGTaGAAGACATTTGAGGAACAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSYAQFL*KTFEEH
Trigger: GTGTTCCTCAAATGTCTTCCACAGGAACTGTGCATA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGAAGTAAGGGAGCAGTaGAAGCTGTCTAACACATCT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISEVREQ*KLSNTS
Trigger: AGATGTGTTAGACAGCTTCCACTGCTCCCTTACTTC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGGTGGCTACGCCACTaGGATTCACATACTGATTAT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRWLRH*DSHTDY
Trigger: ATAATCAGTATGTGAATCCCAGTGGCGTAGCCACCT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTTCCTGGAAAATTCTaGCAGATGGCACCATTCTTG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLPGKF*QMAPFL
Trigger: CAAGAATGGTGCCATCTGCCAGAATTTTCCAGGAAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTACAGTTGAAGCTTCCTaGAAAATTCTGGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSITVEAS*KILADG
Trigger: GCCATCTGCCAGAATTTTCCAGGAAGCTTCAACTGT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTGCTTTCTTGGATATaGATTAAAACGCCATTCTCG +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLLSWI*IKTPFS
Trigger: CGAGAATGGCGTTTTAATCCATATCCAAGAAAGCAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAGAAAAGTGTGCCAGTaGCCGTCTGCAACATATACT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRKVCQ*PSATYT
Trigger: AGTATATGTTGCAGACGGCCACTGGCACACTTTTCT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGAAAAGTGTGCCAGTaGCCGTCTGCAACATATACT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRKVCQ*PSATYT
Trigger: AGTATATGTTGCAGACGGCCACTGGCACACTTTTCT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGATCTGTTTTTGAGATaGAGGCCAAGCTATGCTTCC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIDLFLR*RPSYAS
Trigger: GGAAGCATAGCTTGGCCTCCATCTCAAAAACAGATC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGATCTGTTTTTGAGATaGAGGCCAAGCTATGCTTCC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISDLFLR*RPSYAS
Trigger: GGAAGCATAGCTTGGCCTCCATCTCAAAAACAGATC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGTTTCTTCTCCTCTTTaGGATTTTTGGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSVSSPL*DFWPSS
Trigger: GGAAGAAGGCCAAAAATCCCAAAGAGGAGAAGAAAC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAATGATATCTGGTTTTaGGTTCCCTTCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSNDIWF*VPFRLL
Trigger: AAGCAGCCTGAAGGGAACCCAAAACCAGATATCATT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATGCAATTCCCTTGCTaGGCTGTTTCTATAGAACGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSMQFPC*AVSIER
Trigger: ACGTTCTATAGAAACAGCCCAGCAAGGGAATTGCAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTGAAAATGCCAGGTTaGCAGGTGTCACCATGCATT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLKMPG*QVSPCI
Trigger: AATGCATGGTGACACCTGCCAACCTGGCATTTTCAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTGAAAATGCCAGGTTaGCAGGTGTCACCATGCATT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILKMPG*QVSPCI
Trigger: AATGCATGGTGACACCTGCCAACCTGGCATTTTCAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAATAGAAAGTCCGACTaGAGGAGAAGATTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSINRKSD*RRRFQW
Trigger: CCACTGGAATCTTCTCCTCCAGTCGGACTTTCTATT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTTCGAGGCTTCAGTCTaGCTCCATAATTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFFEASV*LHNYLH
Trigger: ATGAAGATAATTATGGAGCCAGACTGAAGCCTCGAA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCACATCATACCCTTCTaGCTGGCTAAATACTGGCTT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISHIIPF*LAKYWL
Trigger: AAGCCAGTATTTAGCCAGCCAGAAGGGTATGATGTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCGTCTAGTTTCTATTaGCACAGCTTGATCATTGGC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPSSFY*HSLIIG
Trigger: GCCAATGATCAAGCTGTGCCAATAGAAACTAGACGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATTAGCACCTTCATCTaGGTCAGCAGCCATAATTGT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSISTFI*VSSHNC
Trigger: ACAATTATGGCTGCTGACCCAGATGAAGGTGCTAAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGAATCCACACCACTTTaGCAGGAACCACCATTAAAG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISESTPL*QEPPLK
Trigger: CTTTAATGGTGGTTCCTGCCAAAGTGGTGTGGATTC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATACACATACGCCACTaGGAAAGCACAAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFIHIRH*ESTSSF
Trigger: AAAAGAACTTGTGCTTTCCCAGTGGCGTATGTGTAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAAGGTGGCAGTGTTCTaGGGACAACATGCAATCATT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISKVAVF*GQHAII
Trigger: AATGATTGCATGTTGTCCCCAGAACACTGCCACCTT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAGCTTTTAGGACTTTaGGTACACCATTCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKLLGL*VHHSCQ
Trigger: TTGACAAGAATGGTGTACTCAAAGTCCTAAAAGCTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAAAATAATGGAGACTTaGGCAGTGCTTGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSKIMET*AVLVNL
Trigger: CAGATTCACAAGCACTGCTCAAGTCTCCATTATTTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTCTGGGTCAGTTGCTTaGGCTTTGAAAACAACAGTA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISGSVA*ALKTTV
Trigger: TACTGTTGTTTTCAAAGCTCAAGCAACTGACCCAGA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCACCAAACAGAACATATaGGAGTTTGCTGTTAGATCC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSTKQNI*EFAVRS
Trigger: GGATCTAACAGCAAACTCTCATATGTTCTGTTTGGT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCTCAGGAATTGTTGTaGAATACGCTTTACTGGCAA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPQELL*NTLYWQ
Trigger: TTGCCAGTAAAGCGTATTTCACAACAATTCCTGAGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATCTGTCTTTGGAAATaGGCCACCATCTTTTACATG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSICLWK*ATIFYM
Trigger: CATGTAAAAGATGGTGGCTCATTTCCAAAGACAGAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGGTTTTCAGGAAACATaGACGTTTGTTCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISGFQET*TFVLWL
Trigger: GAGCCAAAGAACAAACGTTCATGTTTCCTGAAAACC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGTTTTCAGGAAACATaGACGTTTGTTCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGFQET*TFVLWL
Trigger: GAGCCAAAGAACAAACGTTCATGTTTCCTGAAAACC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAATCATGACTTTTACTaGAGTACTCTGAGACGGGGA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSINHDFY*STLRRG
Trigger: TCCCCGTCTCAGAGTACTTCAGTAAAAGTCATGATT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTGGGCACTAAATATCTaGGAAAACCTAGGGGCATTA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIWALNI*ENLGAL
Trigger: TAATGCCCCTAGGTTTTCTCAGATATTTAGTGCCCA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTCTGTTGCAAATACCTaGGTTACTTTGGAGCCAATC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISVANT*VTLEPI
Trigger: GATTGGCTCCAAAGTAACTCAGGTATTTGCAACAGA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAAACACTTGTCCATTTaGTCCCTCATCAGGATCTGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIKHLSI*SLIRIC
Trigger: ACAGATCCTGATGAGGGATCAAATGGACAAGTGTTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAAACACTTGTCCATTTaGTCCCTCATCAGGATCTGT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISKHLSI*SLIRIC
Trigger: ACAGATCCTGATGAGGGATCAAATGGACAAGTGTTT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGGTTTACCTCGATCTaGAGATGTCACTATAAAACT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRFTSI*RCHYKT
Trigger: AGTTTTATAGTGACATCTTCAGATCGAGGTAAACCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTCAGTGACAGTTATGTaGACAGTTGCTTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISVTVM*TVAWEE
Trigger: TTCTTCCCAAGCAACTGTTCACATAACTGTCACTGA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTGCAGAAACAGTTCTaGCAATGGACCCAATGCTAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLQKQF*QWTQCY
Trigger: ATAGCATTGGGTCCATTGTCAGAACTGTTTCTGCAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGTCCAGTCTTCTTATTaGTCTGGAAACCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISVQSSY*SGNPSF
Trigger: GAAAGAAGGGTTTCCAGATCAATAAGAAGACTGGAC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTATATCTTCCAGGGTaGCTAATAAAGAGGCACTAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLYLPG*LIKRHY
Trigger: GTAGTGCCTCTTTATTAGTCACCCTGGAAGATATAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAAACTGCCACATTACTaGCAGTACAATATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISKLPHY*QYNILA
Trigger: AGCCAGGATATTGTACTGTCAGTAATGTGGCAGTTT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGTAACTCTATTTGGCTaGACATCAAGAGTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISVTLFG*TSRVQS
Trigger: TGACTGGACTCTTGATGTTCAGCCAAATAGAGTTAC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGTAACTCTATTTGGCTaGACATCAAGAGTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIVTLFG*TSRVQS
Trigger: TGACTGGACTCTTGATGTTCAGCCAAATAGAGTTAC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCTGCATCAGATTCATTaGCTTGAGATAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLHQIH*LEIIWA
Trigger: TGCCCAAATTATCTCAAGTCAATGAATCTGATGCAG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGCAAACATACCTTTCTaGTCCCCAGTAGTAATGAGA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIANIPF*SPVVMR
Trigger: TCTCATTACTACTGGGGATCAGAAAGGTATGTTTGC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAAAACATATCTGTCTTaGAGTTCACGGTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSKTYLS*SSRSSS
Trigger: TGAACTGGACCGTGAACTTCAAGACAGATATGTTTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCCAATTAGTGTTACCTaGCCAGAGGTACTGTCTATA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISPISVT*PEVLSI
Trigger: TATAGACAGTACCTCTGGTCAGGTAACACTAATTGG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTAAAGTCCCTCACGTaGATAACCACTGACATTGTA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLKSLT*ITTDIV
Trigger: TACAATGTCAGTGGTTATTCACGTGAGGGACTTTAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCTATTGGCACAGCTTaGTCATTGGCTTTTACAGTC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSIGTA*SLAFTV
Trigger: GACTGTAAAAGCCAATGATCAAGCTGTGCCAATAGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTATAACGATCAACAATaGAGGTGTCTGTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISYNDQQ*RCLCPH
Trigger: ATGGGGACACAGACACCTTCATTGTTGATCGTTATA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCTGTTGCTGAAACTATaGGATTGTAGATCAACTGTG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLLLKL*DCRSTV
Trigger: CACAGTTGATCTACAATCTCATAGTTTCAGCAACAG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGCTAGCTGCTTCTATTaGTATCACGTTTGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISASCFY*YHVCAN
Trigger: ATTGGCACAAACGTGATATCAATAGAAGCAGCTAGC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGTTGATGCCATCATCTaGATCAGTAACATTAAACAC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFVDAII*ISNIKH
Trigger: GTGTTTAATGTTACTGATGCAGATGATGGCATCAAC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTGTCAACAGTAAACTaGCCAAGGCTATCACCTGAA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILSTVN*PRLSPE
Trigger: TTCAGGTGATAGCCTTGGGCAGTTTACTGTTGACAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTGTCAACAGTAAACTaGCCAAGGCTATCACCTGAA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLSTVN*PRLSPE
Trigger: TTCAGGTGATAGCCTTGGGCAGTTTACTGTTGACAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTTCATCTCCATCTGCTaGGAACACTTGTATTATATC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFFISIC*EHLYYI
Trigger: GATATAATACAAGTGTTCGCAGCAGATGGAGATGAA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGCCTTCATCTCCATCTaGTGCGAACACTTGTATTAT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIAFISI*CEHLYY
Trigger: ATAATACAAGTGTTCGCAGCAGATGGAGATGAAGGC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATCTGTTCCAGTTGGTaGATCCTCAGGAATTGTTGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIICSSW*ILRNCC
Trigger: ACAACAATTCCTGAGGATGCACCAACTGGAACAGAT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTACTGTCCTTGTCCATTaGCGAAACAGTAAGTATTTT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFTVLVH*RNSKYF
Trigger: AAAATACTTACTGTTTCGGCAATGGACAAGGACAGT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTCATCAGGATCTGTTaGAAATACCTGAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLIRIC*KYLSYF
Trigger: AAAGTAACTCAGGTATTTGCAACAGATCCTGATGAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCATTTACGGTCACACTaGAGTAACCAGTTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISHLRSH*SNQFLQ
Trigger: TTGCAAGAACTGGTTACTGCAGTGTGACCGTAAATG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCATTTACGGTCACACTaGAGTAACCAGTTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIHLRSH*SNQFLQ
Trigger: TTGCAAGAACTGGTTACTGCAGTGTGACCGTAAATG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGTGATCTGTCCTGTCTaGGGATTAATAGAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISVICPV*GLIEKA
Trigger: TGCCTTTTCTATTAATCCGCAGACAGGACAGATCAC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGACAGATAGAAGTCTaGAATCTGCTCTCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSRQIEV*NLLSVN
Trigger: ATTGACAGAGAGCAGATTGCAGACTTCTATCTGTCT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATTTCGCTTCACAGCTaGCAAAAGAAACGTTCTATT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFISLHS*QKKRSI
Trigger: AATAGAACGTTTCTTTTGGCAGCTGTGAAGCGAAAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAAGCCTAGGGGACTGTaGCTCTGGATTGAAAATTTT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISKPRGL*LWIENF
Trigger: AAAATTTTCAATCCAGAGGCACAGTCCCCTAGGCTT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAAGATGCAATTCCCTTaGTGGGCTGTTTCTATAGAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSKMQFP*WAVSIE
Trigger: TTCTATAGAAACAGCCCAGCAAGGGAATTGCATCTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTCTTCATTTGCTGCTaGTTTTTCTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSFFICC*FFWKRC
Trigger: GCATCTCTTCCAGAAAAAGCAGCAGCAAATGAAGAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGCCTTCTTCATTTGCTaGTGCTTTTTCTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISAFFIC*CFFWKR
Trigger: TCTCTTCCAGAAAAAGCAGCAGCAAATGAAGAAGGC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTGACCATTAATGTCTaGATCAGGGTCATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILTINV*IRVMCS
Trigger: ACTGCACATGACCCTGATGCAGACATTAATGGTCAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGTTCTGGGGACAACATaGAATCATTCTGTTCCTAAT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSVLGTT*NHSVPN
Trigger: ATTAGGAACAGAATGATTGCATGTTGTCCCCAGAAC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAACATCTGTTCCAGTTaGTGCATCCTCAGGAATTGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSINICSS*CILRNC
Trigger: ACAATTCCTGAGGATGCACCAACTGGAACAGATGTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGATGTGAGTGACATATaGGTGATGCTGAAATCTTGG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIDVSDI*VMLKSW
Trigger: CCAAGATTTCAGCATCACCCATATGTCACTCACATC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATGCAGTTCAGAATTTaGTCCAATATCAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFMQFRI*SNISIC
Trigger: ACAGATGCTGATATTGGACCAAATTCTGAACTGCAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAATGGCTCCCCTCAGTaGGTCAATGTGAAATTTTTC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSINGSPQ*VNVKFF
Trigger: GAAAAATTTCACATTGACCCACTGAGGGGAGCCATT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAGAGAGCTGACTGGTTaGTTTTCAGGAAACATGAAC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRELTG*FSGNMN
Trigger: GTTCATGTTTCCTGAAAACCAACCAGTCAGCTCTCT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGACAAGAGAGCTGACTaGTTGGTTTTCAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIDKRAD*LVFRKH
Trigger: ATGTTTCCTGAAAACCAACCAGTCAGCTCTCTTGTC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTGCTGCCAAAGTTCTTaGCCAATACCTTCAAAGACA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSICCQSS*PIPSKT
Trigger: TGTCTTTGAAGGTATTGGCCAAGAACTTTGGCAGCA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGCTGCCAAAGTTCTTaGCCAATACCTTCAAAGACA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCCQSS*PIPSKT
Trigger: TGTCTTTGAAGGTATTGGCCAAGAACTTTGGCAGCA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTGCTGTTATCCACTGTaGCATTGGAAAATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSICCYPL*HWKIQQ
Trigger: TTGCTGGATTTTCCAATGCCACAGTGGATAACAGCA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAACTGTAACTCTATTTaGCTGAACATCAAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFNCNSI*LNIKSP
Trigger: TGGACTCTTGATGTTCAGCCAAATAGAGTTACAGTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAATGATATCTGGTTTTaGGTTCCCTTCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISNDIWF*VPFRLL
Trigger: AAGCAGCCTGAAGGGAACCCAAAACCAGATATCATT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCCTTTCAATGATATCTaGTTTTGGGTTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISPFNDI*FWVPFR
Trigger: CCTGAAGGGAACCCAAAACCAGATATCATTGAAAGG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGAAGTATATACCATTaGCTTCTCCCTGTCATATTC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGSIYH*LLPVIF
Trigger: GAATATGACAGGGAGAAGCCAATGGTATATACTTCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTGCTGCTGCTTTTTCTaGAAGAGATGCCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSCCCFF*KRCQIF
Trigger: AAAGATTTGGCATCTCTTCCAGAAAAAGCAGCAGCA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGAAAAGACAGGAGGATaGTCATTGATGTCATTAACA +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFEKTGG*SLMSLT
Trigger: TGTTAATGACATCAATGACCATCCTCCTGTCTTTTC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTATGTTCACTGATATaGAACCATCCCAGTCCATTG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILCSLI*NHPSPL
Trigger: CAATGGACTGGGATGGTTCCATATCAGTGAACATAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATATTCAGAACAATCTaGGAAGCAAGTTCACGGTCC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISIFRTI*EASSRS
Trigger: GGACCGTGAACTTGCTTCCCAGATTGTTCTGAATAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCATACCCTTCTGGCTaGCTAAATACTGGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSYPSG*LNTGFS
Trigger: TGAAAAGCCAGTATTTAGCCAGCCAGAAGGGTATGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTACTATTGCCTGGTTaGGAGATTGTAAATTGCCAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLLLPG*EIVNCH
Trigger: GTGGCAATTTACAATCTCCCAACCAGGCAATAGTAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCTTACTTCTCCATTTaGCCCAAAGTCTTTATCTAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPYFSI*PKVFIY
Trigger: GTAGATAAAGACTTTGGGCCAAATGGAGAAGTAAGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATACACATACGCCACTaGGAAAGCACAAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSIHIRH*ESTSSF
Trigger: AAAAGAACTTGTGCTTTCCCAGTGGCGTATGTGTAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTTCTGCTCGAACAGTaGGGATATAATATTGCTGTA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILLLEQ*GYNIAV
Trigger: TACAGCAATATTATATCCTCACTGTTCGAGCAGAAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAAGCTTTTAGGACTTTaGGTACACCATTCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSKLLGL*VHHSCQ
Trigger: TTGACAAGAATGGTGTACTCAAAGTCCTAAAAGCTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAAAATAATGGAGACTTaGGCAGTGCTTGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIKIMET*AVLVNL
Trigger: CAGATTCACAAGCACTGCTCAAGTCTCCATTATTTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTACCAAACAGAACATATaGGAGTTTGCTGTTAGATCC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSITKQNI*EFAVRS
Trigger: GGATCTAACAGCAAACTCTCATATGTTCTGTTTGGT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATCTGTCTTTGGAAATaGGCCACCATCTTTTACATG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISICLWK*ATIFYM
Trigger: CATGTAAAAGATGGTGGCTCATTTCCAAAGACAGAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCACCATTTTCATTCCCTaGTCCGATGAAGTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSTIFIP*SDEVRK
Trigger: TTTTCTTACTTCATCGGATCAGGGAATGAAAATGGT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATCAACAGCCAAAACTaGGAGATTATAGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISINSQN*EIIDGK
Trigger: CTTCCCATCTATAATCTCTCAGTTTTGGCTGTTGAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGGAATTCCTCCAAGTaGTATAGTAAGCACATCAAG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISWNSSK*YSKHIK
Trigger: CTTGATGTGCTTACTATATCACTTGGAGGAATTCCA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTGCATCAGATTCATTaGCTTGAGATAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLHQIH*LEIIWA
Trigger: TGCCCAAATTATCTCAAGTCAATGAATCTGATGCAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAGATATGCTATATTTaGCAGTACCATTGGTACCCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQICYI*QYHWYP
Trigger: TGGGTACCAATGGTACTGTCAAATATAGCATATCTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATCAACAAAGAGTGTTaGTTTAGGGAAAGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIINKEC*FRERRG
Trigger: ACCCCTTCTTTCCCTAAATCAACACTCTTTGTTGAT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTGGCATCTGTTGAATaGTTGTGTAGGATAGTTGAC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLASVE*LCRIVD
Trigger: GTCAACTATCCTACACAATCATTCAACAGATGCCAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTAATGGAAGCCTCATaGAAGTCAGGAGACTATAAT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILMEAS*KSGDYN
Trigger: ATTATAGTCTCCTGACTTTCATGAGGCTTCCATTAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTGTCATTGATATCCTaGAGTGTTATTTCTACCCGC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLSLIS*SVISTR
Trigger: GCGGGTAGAAATAACACTTCAGGATATCAATGACAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTACTATCTGGGTCAGTTaGTTGAGCTTTGAAAACAAC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSITIWVS*LSFENN
Trigger: GTTGTTTTCAAAGCTCAAGCAACTGACCCAGATAGT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTTTATACAAAGCTTGTaGAAAGATGGGGTTGTTATC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFFIQSL*KDGVVI
Trigger: GATAACAACCCCATCTTTGCACAAGCTTTGTATAAA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAGACAGATAGAAGTCTaGAATCTGCTCTCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRQIEV*NLLSVN
Trigger: ATTGACAGAGAGCAGATTGCAGACTTCTATCTGTCT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCTATAACTGTGATATaGACAGTTCCTGTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSITVI*TVPVED
Trigger: GTCTTCCACAGGAACTGTGCATATCACAGTTATAGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTGTTCTCTTCATATaGACTGTACAGTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIIVLFI*TVQLHS
Trigger: GCTGTGCAACTGTACAGTGCATATGAAGAGAACAAT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATTGTTCTCTTCATATaGACTGTACAGTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISIVLFI*TVQLHS
Trigger: GCTGTGCAACTGTACAGTGCATATGAAGAGAACAAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTTCCCAGCAATTCCTaGATCGGATGTAAAATATAC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSFPSNS*IGCKIY
Trigger: GTATATTTTACATCCGATGCAGGAATTGCTGGGAAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTCTTCATTTGCTGCTaGTTTTTCTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIFFICC*FFWKRC
Trigger: GCATCTCTTCCAGAAAAAGCAGCAGCAAATGAAGAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTCAGCAATGGTGTATaGAATTTCACCATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIFSNGV*NFTICS
Trigger: GGAGCAAATGGTGAAATTGCATACACCATTGCTGAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGATCCCCTGATCTGTTaGTATGACTGTAAAGCTAAA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISDPLIC*YDCKAK
Trigger: TTTAGCTTTACAGTCATAGCAACAGATCAGGGGATC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTTCATAGTCTAATTTaGCAATTAGTGTTACCTGAC +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLHSLI*QLVLPD
Trigger: GTCAGGTAACACTAATTGGCAAATTAGACTATGAAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCACAAGTTCTTTTCTaGAATGGTAAAGGTATCAAT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFAQVLF*NGKGIN
Trigger: ATTGATACCTTTACCATTGCAGAAAAGAACTTGTGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGAGACTATAATCATTTaGTCAAGGATCCAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: YATGKAQVLFCNGKGINFETIII*SRIQKF
Trigger: AAACTTCTGGATCCTTGAGCAAATGATTATAGTCTC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGTTCTGGGGACAACATaGAATCATTCTGTTCCTAAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISVLGTT*NHSVPN
Trigger: ATTAGGAACAGAATGATTGCATGTTGTCCCCAGAAC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCGTTGGAAATACTGGTaGATTGTCATTGATATCCTG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRWKYW*IVIDIL
Trigger: CAGGATATCAATGACAATCCACCAGTATTTCCAACG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGTCCGTTGGAAATACTaGTGGATTGTCATTGATATC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIVRWKY*WIVIDI
Trigger: GATATCAATGACAATCCACCAGTATTTCCAACGGAC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGAAAGAAATGTCGGTaGGTTATCATTTACATCCAA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGKKCR*VIIYIQ
Trigger: TTGGATGTAAATGATAACCCACCGACATTTCTTTCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTCTGTTGCATTTAGGTaGATAACTGTTGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSVAFR*ITVVPL
Trigger: AAGTGGAACAACAGTTATCCACCTAAATGCAACAGA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTGAGAGATTATAGATaGGAAGGGTTTCTCGATCTA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLRDYR*EGFLDL
Trigger: TAGATCGAGAAACCCTTCCCATCTATAATCTCTCAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTGCTTTCTTGGATATaGATTAAAACGCCATTCTCG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILLSWI*IKTPFS
Trigger: CGAGAATGGCGTTTTAATCCATATCCAAGAAAGCAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGGAAGTATATACCATTaGCTTCTCCCTGTCATATTC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISGSIYH*LLPVIF
Trigger: GAATATGACAGGGAGAAGCCAATGGTATATACTTCC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTCGAGGCTTCAGTCTaGCTCCATAATTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISFEASV*LHNYLH
Trigger: ATGAAGATAATTATGGAGCCAGACTGAAGCCTCGAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTGCTGCTGCTTTTTCTaGAAGAGATGCCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSICCCFF*KRCQIF
Trigger: AAAGATTTGGCATCTCTTCCAGAAAAAGCAGCAGCA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATGCTAAAAGTTCCGTaGTTGTTAGTCCCAGTAATA +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSMLKVP*LLVPVI
Trigger: TATTACTGGGACTAACAACCACGGAACTTTTAGCAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAATACTCCCAGTGTTTaGGCTAATGCTAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSINTPSV*ANAKSS
Trigger: GGAACTTTTAGCATTAGCCCAAACACTGGGAGTATT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGCACAGCTTGATCATTaGCTTTTACAGTCAACTCAA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIAQLDH*LLQSTQ
Trigger: TTGAGTTGACTGTAAAAGCCAATGATCAAGCTGTGC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTGGAGCATTGTCATTaGTGTCTGTCACAAATATTG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLEHCH*CLSQIL
Trigger: CAATATTTGTGACAGACATCAATGACAATGCTCCAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTGGAGCATTGTCATTaGTGTCTGTCACAAATATTG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILEHCH*CLSQIL
Trigger: CAATATTTGTGACAGACATCAATGACAATGCTCCAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAGGTTTACCTCGATCTaGAGATGTCACTATAAAACT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRFTSI*RCHYKT
Trigger: AGTTTTATAGTGACATCTTCAGATCGAGGTAAACCT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTACCATTTTCATTCCCTaGTCCGATGAAGTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSITIFIP*SDEVRK
Trigger: TTTTCTTACTTCATCGGATCAGGGAATGAAAATGGT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATGGTTTCTGAGTTGTaGGGAATATCAGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIMVSEL*GISVSS
Trigger: TGATGAAACTGATATTCCTCACAACTCAGAAACCAT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR TCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATGGTTTCTGAGTTGTaGGGAATATCAGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISMVSEL*GISVSS
Trigger: TGATGAAACTGATATTCCTCACAACTCAGAAACCAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTCATCTCCATCTGCTaGGAACACTTGTATTATATC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISFISIC*EHLYYI
Trigger: GATATAATACAAGTGTTCGCAGCAGATGGAGATGAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTACTGTCCTTGTCCATTaGCGAAACAGTAAGTATTTT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISTVLVH*RNSKYF
Trigger: AAAATACTTACTGTTTCGGCAATGGACAAGGACAGT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTCATCAGGATCTGTTaGAAATACCTGAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLIRIC*KYLSYF
Trigger: AAAGTAACTCAGGTATTTGCAACAGATCCTGATGAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCGCTTCACAGCTaGCAAAAGAAACGTTCTATT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIISLHS*QKKRSI
Trigger: AATAGAACGTTTCTTTTGGCAGCTGTGAAGCGAAAT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGAGACTATAATCATTTaGTCAAGGATCCAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSETIII*SRIQKF
Trigger: AAACTTCTGGATCCTTGAGCAAATGATTATAGTCTC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATGCAGTTCAGAATTTaGTCCAATATCAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISMQFRI*SNISIC
Trigger: ACAGATGCTGATATTGGACCAAATTCTGAACTGCAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCATAATCAAGAGCTTTaGCTAGTGTTAATATACCTG +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSHNQEL*LVLIYL
Trigger: CAGGTATATTAACACTAGCCAAAGCTCTTGATTATG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATCAGAGAGGAATACTaGAGAATTATCATTCACATC +
Preference number: 4 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSIREEY*RIIIHI
Trigger: GATGTGAATGATAATTCTCCAGTATTCCTCTCTGAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCTGTTGCATTTAGGTaGATAACTGTTGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSVAFR*ITVVPL
Trigger: AAGTGGAACAACAGTTATCCACCTAAATGCAACAGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGTCTTCTTATTGATCTaGAAACCCTTCTTTCGACTA +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISVFLLI*KPFFRL
Trigger: TAGTCGAAAGAAGGGTTTCCAGATCAATAAGAAGAC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGTCTTCTTATTGATCTaGAAACCCTTCTTTCGACTA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIVFLLI*KPFFRL
Trigger: TAGTCGAAAGAAGGGTTTCCAGATCAATAAGAAGAC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAATGAAGATAGTGGTTaGTCAAGAAGTCCTTTACTG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSINEDSG*SRSPLL
Trigger: CAGTAAAGGACTTCTTGACCAACCACTATCTTCATT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAATGAAGATAGTGGTTaGTCAAGAAGTCCTTTACTG +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISNEDSG*SRSPLL
Trigger: CAGTAAAGGACTTCTTGACCAACCACTATCTTCATT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAACTGTAACTCTATTTaGCTGAACATCAAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSINCNSI*LNIKSP
Trigger: TGGACTCTTGATGTTCAGCCAAATAGAGTTACAGTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATGGTTACTATTGCCTaGTTGGGAGATTGTAAATTG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIMVTIA*LGDCKL
Trigger: CAATTTACAATCTCCCAACCAGGCAATAGTAACCAT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATACAATTGACCATCTaGGAATATGCCAAAAGCATC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISIQLTI*EYAKSI
Trigger: GATGCTTTTGGCATATTCCCAGATGGTCAATTGTAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCAGTTGATTTTTCTATaGCATAAACATCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIQLIFL*HKHPPG
Trigger: ACCTGGTGGATGTTTATGCCATAGAAAAATCAACTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTTATACAAAGCTTGTaGAAAGATGGGGTTGTTATC +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIFIQSL*KDGVVI
Trigger: GATAACAACCCCATCTTTGCACAAGCTTTGTATAAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTTCCAAATGCTGCATaGCACATAACTAGTTACAAA +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIFPNAA*HITSYK
Trigger: TTTGTAACTAGTTATGTGGCATGCAGCATTTGGAAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR GCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGCACAAGTTCTTTTCTaGAATGGTAAAGGTATCAAT +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIAQVLF*NGKGIN
Trigger: ATTGATACCTTTACCATTGCAGAAAAGAACTTGTGC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCATAATCAAGAGCTTTaGCTAGTGTTAATATACCTG +
Preference number: 4 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIHNQEL*LVLIYL
Trigger: CAGGTATATTAACACTAGCCAAAGCTCTTGATTATG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CCA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATCAGAGAGGAATACTaGAGAATTATCATTCACATC +
Preference number: 4 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISIREEY*RIIIHI
Trigger: GATGTGAATGATAATTCTCCAGTATTCCTCTCTGAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp CGGATGTCCGCGTTGGTGCCCTCGTCCGCGTCCGCCGCCGCCACCTaGAGGACGCTGGAACCCACAACCGCGTCCTCAGGCACCCCCGCC +
Preference number: 5 (lower is better)
Translates to: RMSALVPSSASAAAT*RTLEPTTASSGTPA
Trigger: GGCGGGGGTGCCTGAGGACGCGGTTGTGGGTTCCAGCGTCCTCCAGGTGGCGGCGGCGGACGCGGACGAGGGCACCAACGCGGACATCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 90 bp CGGCGCCTGTCAGCGCTCTCCCTCTCGCCGGCCGGGGCCGAAGGTTaGACTGCGGTGGAGCTAGGGCTCCGCGAGCCCTTCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: RRLSALSLSPAGAEG*TAVELGLREPFSTS
Trigger: GGAGGTGGAGAAGGGCTCGCGGAGCCCTAGCTCCACCGCAGTCCAACCTTCGGCCCCGGCCGGCGAGAGGGAGAGCGCTGACAGGCGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp GGAAGGGGGTCCCCTCGTCCTGCAGGCGATAGCGGATGTCCGCGTTaGTGCCCTCGTCCGCGTCCGCCGCCGCCACCTGGAGGACGCTGG +
Preference number: 5 (lower is better)
Translates to: GRGSPRPAGDSGCPR*CPRPRPPPPPGGRW
Trigger: CCAGCGTCCTCCAGGTGGCGGCGGCGGACGCGGACGAGGGCACCAACGCGGACATCCGCTATCGCCTGCAGGACGAGGGGACCCCCTTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 90 bp GCTGAGGCCCAGGCGGCGGCGTCTGCGCGCAGGCAGTTCGGGAACTaGGTTCCAAGCGCTAGCGTTCGCGCTCTGGCTCCCGTACCCGGG +
Preference number: 5 (lower is better)
Translates to: AEAQAAASARRQFGN*VPSASVRALAPVPG
Trigger: CCCGGGTACGGGAGCCAGAGCGCGAACGCTAGCGCTTGGAACGCAGTTCCCGAACTGCCTGCGCGCAGACGCCGCCGCCTGGGCCTCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp CGTTGGTGCCCTCGTCCGCGTCCGCCGCCGCCACCTGGAGGACGCTaGAACCCACAACCGCGTCCTCAGGCACCCCCGCCTGGTAGTGAG +
Preference number: 5 (lower is better)
Translates to: RWCPRPRPPPPPGGR*NPQPRPQAPPPGSE
Trigger: CTCACTACCAGGCGGGGGTGCCTGAGGACGCGGTTGTGGGTTCCAGCGTCCTCCAGGTGGCGGCGGCGGACGCGGACGAGGGCACCAACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 90 bp CTCTCTCTCCTTCACAGTTGGCAGCGGAGGCGGCGAAGTCGGCGCTaGGCTGTAGTGACGCCCTCCGCAGCTCCGGACGGCGCCTGTCAG +
Preference number: 5 (lower is better)
Translates to: LSLLHSWQRRRRSRR*AVVTPSAAPDGACQ
Trigger: CTGACAGGCGCCGTCCGGAGCTGCGGAGGGCGTCACTACAGCCCAGCGCCGACTTCGCCGCCTCCGCTGCCAACTGTGAAGGAGAGAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp CCTGCAGCCGCCGCCGCCGCCGCCCCTGTTGCGGCTTCAAGCCCGTaGTCCGGCACAAACAACAGCCAGGGCTCCTCGGCATTTTTCACC +
Preference number: 5 (lower is better)
Translates to: PAAAAAAAPVAASSP*SGTNNSQGSSAFFT
Trigger: GGTGAAAAATGCCGAGGAGCCCTGGCTGTTGTTTGTGCCGGACCACGGGCTTGAAGCCGCAACAGGGGCGGCGGCGGCGGCGGCTGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp AAGCCGGGGCGCGTCTGGATGGTGCCTACCAGAGTGCCTGGAGGTTaGTCTTCCAGCACTTGGAACACCTGGCGCGGCTCGGCCCCGTGG +
Preference number: 5 (lower is better)
Translates to: KPGRVWMVPTRVPGG*SSSTWNTWRGSAPW
Trigger: CCACGGGGCCGAGCCGCGCCAGGTGTTCCAAGTGCTGGAAGAGCAACCTCCAGGCACTCTGGTAGGCACCATCCAGACGCGCCCCGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 90 bp GCCTCGGCGCGCCCAGTGAGGGAAGGCACGCCTCTGTCCATCGCCTaGACCGTAAGCGAGTATTGGCGCCGAGCTTCGAAGTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: ASARPVREGTPLSIA*TVSEYWRRASKSRG
Trigger: GCCCCTGGACTTCGAAGCTCGGCGCCAATACTCGCTTACGGTGCAGGCGATGGACAGAGGCGTGCCTTCCCTCACTGGGCGCGCCGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 90 bp TGGATGGTGCCTACCAGAGTGCCTGGAGGTTGCTCTTCCAGCACTTaGAACACCTGGCGCGGCTCGGCCCCGTGGACCCAGGCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: WMVPTRVPGGCSSST*NTWRGSAPWTQACP
Trigger: GGGGCAGGCCTGGGTCCACGGGGCCGAGCCGCGCCAGGTGTTCCAAGTGCTGGAAGAGCAACCTCCAGGCACTCTGGTAGGCACCATCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp GCACTTCGGTGGGGTAGGTGGGCGCGCTGGAAAGGACCACCAGGTTaGTCACGTCGCTGGGCAGGCTCTCGCGGTCGATGGTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: ALRWGRWARWKGPPG*SRRWAGSRGRWWRW
Trigger: CCACCTCCACCATCGACCGCGAGAGCCTGCCCAGCGACGTGATCAACCTGGTGGTCCTTTCCAGCGCGCCCACCTACCCCACCGAAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 90 bp GCAGGCAGTTCGGGAACTGCGTTCCAAGCGCTAGCGTTCGCGCTCTaGCTCCCGTACCCGGGAGCGCTCAACTCTGCCCCTTCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: AGSSGTAFQALAFAL*LPYPGALNSAPSPP
Trigger: AGGAGGGGAAGGGGCAGAGTTGAGCGCTCCCGGGTACGGGAGCCAGAGCGCGAACGCTAGCGCTTGGAACGCAGTTCCCGAACTGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp CCTACCAGAGTGCCTGGAGGTTGCTCTTCCAGCACTTGGAACACCTaGCGCGGCTCGGCCCCGTGGACCCAGGCCTGCCCCGGAAGCAAT +
Preference number: 5 (lower is better)
Translates to: PTRVPGGCSSSTWNT*RGSAPWTQACPGSN
Trigger: ATTGCTTCCGGGGCAGGCCTGGGTCCACGGGGCCGAGCCGCGCCAGGTGTTCCAAGTGCTGGAAGAGCAACCTCCAGGCACTCTGGTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 90 bp GTAGGTGAAGCCGGGGCGCGTCTGGATGGTGCCTACCAGAGTGCCTaGAGGTTGCTCTTCCAGCACTTGGAACACCTGGCGCGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: VGEAGARLDGAYQSA*RLLFQHLEHLARLG
Trigger: GCCGAGCCGCGCCAGGTGTTCCAAGTGCTGGAAGAGCAACCTCCAGGCACTCTGGTAGGCACCATCCAGACGCGCCCCGGCTTCACCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 90 bp CCCCGCCGCTTAGGCTCACCCTTGTCCTCCACCTCAACCAGGAGCTaGTACTGCGGAGTGACCTCACGGTCCAGTCCGCCCTTGGACACC +
Preference number: 5 (lower is better)
Translates to: PRRLGSPLSSTSTRS*YCGVTSRSSPPLDT
Trigger: GGTGTCCAAGGGCGGACTGGACCGTGAGGTCACTCCGCAGTACCAGCTCCTGGTTGAGGTGGAGGACAAGGGTGAGCCTAAGCGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp CTGCTGCGCCAGGGGGCGCCCCGTAGTTATCAGAGACGGAAACTGTaGGGTTGTAGGAAGGGATGCGCTCGCGGTCCAAGGCGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: LLRQGAPRSYQRRKL*GCRKGCARGPRRWP
Trigger: TGGCCAGCGCCTTGGACCGCGAGCGCATCCCTTCCTACAACCTCACAGTTTCCGTCTCTGATAACTACGGGGCGCCCCCTGGCGCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 90 bp AGGACGCCAAGACAGGCCACCACCATCTCACAGGTCCTTCCCGTGTaGGAGTCTGGGCAGCTACAGGTGAAGCCGGAGTGCAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: RTPRQATTISQVLPV*ESGQLQVKPECRPG
Trigger: GCCAGGCCTGCACTCCGGCTTCACCTGTAGCTGCCCAGACTCGCACACGGGAAGGACCTGTGAGATGGTGGTGGCCTGTCTTGGCGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp TACTGCGGAGTGACCTCACGGTCCAGTCCGCCCTTGGACACCAGATaGAGGAACGCTCCCTCGCCGCTCGGGTTCAGGGTGATGTCCAGA +
Preference number: 5 (lower is better)
Translates to: YCGVTSRSSPPLDTR*RNAPSPLGFRVMSR
Trigger: TCTGGACATCACCCTGAACCCGAGCGGCGAGGGAGCGTTCCTGCATCTGGTGTCCAAGGGCGGACTGGACCGTGAGGTCACTCCGCAGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 90 bp CCCGAGAATTTGCACGGAGATGTTCCCGTTGGCCGCGGGAGAATCTaGGTCCGTCACGGTGAGCAGAGCCACCACGGTGCCCACTTGAGC +
Preference number: 5 (lower is better)
Translates to: PENLHGDVPVGRGRI*VRHGEQSHHGAHLS
Trigger: GCTCAAGTGGGCACCGTGGTGGCTCTGCTCACCGTGACGGACGCAGATTCTCCCGCGGCCAACGGGAACATCTCCGTGCAAATTCTCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp CGGAGATGTTCCCGTTGGCCGCGGGAGAATCTGCGTCCGTCACGGTaGGCAGAGCCACCACGGTGCCCACTTGAGCATTCTCATCTACCG +
Preference number: 5 (lower is better)
Translates to: RRCSRWPRENLRPSR*AEPPRCPLEHSHLP
Trigger: CGGTAGATGAGAATGCTCAAGTGGGCACCGTGGTGGCTCTGCTCACCGTGACGGACGCAGATTCTCCCGCGGCCAACGGGAACATCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 90 bp TGCCTGGTGCTGCTGCCTGGGTGCCCACAGGTCCTCCCTCGGCCCTaGGACCGTGGTACCTTCGAGGCTTCAGTCTGGCTCCATAATTAT +
Preference number: 5 (lower is better)
Translates to: CLVLLPGCPQVLPRP*DRGTFEASVWLHNY
Trigger: ATAATTATGGAGCCAGACTGAAGCCTCGAAGGTACCACGGTCGCAGGGCCGAGGGAGGACCTGTGGGCACCCAGGCAGCAGCACCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp AAGACAGGCCACCACCATCTCACAGGTCCTTCCCGTGTGCGAGTCTaGGCAGCTACAGGTGAAGCCGGAGTGCAGGCCTGGCTCACAGCT +
Preference number: 5 (lower is better)
Translates to: KTGHHHLTGPSRVRV*AATGEAGVQAWLTA
Trigger: AGCTGTGAGCCAGGCCTGCACTCCGGCTTCACCTGTAGCTGCCCAGACTCGCACACGGGAAGGACCTGTGAGATGGTGGTGGCCTGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp AGGGAAGGCACGCCTCTGTCCATCGCCTGCACCGTAAGCGAGTATTaGCGCCGAGCTTCGAAGTCCAGGGGCTCCCGCACCGTGATAAGT +
Preference number: 5 (lower is better)
Translates to: REGTPLSIACTVSEY*RRASKSRGSRTVIS
Trigger: ACTTATCACGGTGCGGGAGCCCCTGGACTTCGAAGCTCGGCGCCAATACTCGCTTACGGTGCAGGCGATGGACAGAGGCGTGCCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 90 bp GGCCCTGACTCAGAACACAGACATGCCCCGCAGGACTTCCAGCTTTaGACACCTTCCCCTGAGGACAGAGGACGCCAAGACAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: GPDSEHRHAPQDFQL*TPSPEDRGRQDRPP
Trigger: TGGTGGCCTGTCTTGGCGTCCTCTGTCCTCAGGGGAAGGTGTGCAAAGCTGGAAGTCCTGCGGGGCATGTCTGTGTTCTGAGTCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp CTGGTTACACAGGATCAGGCTAAGGACCAGGAGGGCCAAGACGGTTaGGCAGCTGCCCACGATGGCAGGCACAGCCCACAAAGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: LVTQDQAKDQEGQDG*AAAHDGRHSPQRQR
Trigger: TCTCTGCCTTTGTGGGCTGTGCCTGCCATCGTGGGCAGCTGCGCAACCGTCTTGGCCCTCCTGGTCCTTAGCCTGATCCTGTGTAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp ACACAGACATGCCCCGCAGGACTTCCAGCTTTGCACACCTTCCCCTaGGGACAGAGGACGCCAAGACAGGCCACCACCATCTCACAGGTC +
Preference number: 5 (lower is better)
Translates to: TQTCPAGLPALHTFP*GQRTPRQATTISQV
Trigger: GACCTGTGAGATGGTGGTGGCCTGTCTTGGCGTCCTCTGTCCTCAGGGGAAGGTGTGCAAAGCTGGAAGTCCTGCGGGGCATGTCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp GCGCGTCGCCGAAACACAAACAGAGGGGGAGGGAAGACCGCGAGCTaGAGCAGCACTCAGAAACTTTGCTCGACACTCATTGATCCCCGC +
Preference number: 5 (lower is better)
Translates to: ARRRNTNRGGGKTAS*SSTQKLCSTLIDPR
Trigger: GCGGGGATCAATGAGTGTCGAGCAAAGTTTCTGAGTGCTGCTCCAGCTCGCGGTCTTCCCTCCCCCTCTGTTTGTGTTTCGGCGACGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp CTGCTTTGCACTTCAAAGTGGCGCTGCTCATTGCCCCCGAGAATTTaGACGGAGATGTTCCCGTTGGCCGCGGGAGAATCTGCGTCCGTC +
Preference number: 5 (lower is better)
Translates to: LLCTSKWRCSLPPRI*TEMFPLAAGESASV
Trigger: GACGGACGCAGATTCTCCCGCGGCCAACGGGAACATCTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 90 bp GGTTCGGCACTTTGCTGCTTTGCACTTCAAAGTGGCGCTGCTCATTaGCCCCGAGAATTTGCACGGAGATGTTCCCGTTGGCCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: GSALCCFALQSGAAH*PREFARRCSRWPRE
Trigger: CTCCCGCGGCCAACGGGAACATCTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGCAAAGTGCCGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp ATGGCAGGCACAGCCCACAAAGGCAGAGAGATCTCTTCAGGGCCCTaGCTCAGAACACAGACATGCCCCGCAGGACTTCCAGCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: MAGTAHKGREISSGP*LRTQTCPAGLPALH
Trigger: GTGCAAAGCTGGAAGTCCTGCGGGGCATGTCTGTGTTCTGAGTCAGGGCCCTGAAGAGATCTCTCTGCCTTTGTGGGCTGTGCCTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp GCCTGCCCCGGAAGCAATGACAGTAGCCAAAACACTCGAAGGAGCTaGGATACTGATAGAGTGTGCAACGGGAGCCACGGGCGGCCAGTA +
Preference number: 5 (lower is better)
Translates to: ACPGSNDSSQNTRRS*DTDRVCNGSHGRPV
Trigger: TACTGGCCGCCCGTGGCTCCCGTTGCACACTCTATCAGTATCTCAGCTCCTTCGAGTGTTTTGGCTACTGTCATTGCTTCCGGGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp GACCGCGAGCTGGAGCAGCACTCAGAAACTTTGCTCGACACTCATTaGTCCCCGCACTTTAGTTCGCCTGGACTCCCCCTAGCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: DRELEQHSETLLDTH*SPHFSSPGLPLAPS
Trigger: ACTGGGAGCTAGGGGGAGTCCAGGCGAACTAAAGTGCGGGGATCAATGAGTGTCGAGCAAAGTTTCTGAGTGCTGCTCCAGCTCGCGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674496.2
CDS GCA 90 bp AGAGGGGGAGGGAAGACCGCGAGCTGGAGCAGCACTCAGAAACTTTaGTCGACACTCATTGATCCCCGCACTTTAGTTCGCCTGGACTCC +
Preference number: 5 (lower is better)
Translates to: RGGGKTASWSSTQKL*STLIDPRTLVRLDS
Trigger: GGAGTCCAGGCGAACTAAAGTGCGGGGATCAATGAGTGTCGAGCAAAGTTTCTGAGTGCTGCTCCAGCTCGCGGTCTTCCCTCCCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674496.2
CDS CCA 90 bp CGGTGCCCACTTGAGCATTCTCATCTACCGAGGCGTAGCGCGAGGTaGCCGGGAAGTAGCGGAACTTCACTACCGGGTCATTGTCATTCA +
Preference number: 5 (lower is better)
Translates to: RCPLEHSHLPRRSAR*PGSSGTSLPGHCHS
Trigger: TGAATGACAATGACCCGGTAGTGAAGTTCCGCTACTTCCCGGCCACCTCGCGCTACGCCTCGGTAGATGAGAATGCTCAAGTGGGCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp GGTTGTAGGAAGGGATGCGCTCGCGGTCCAAGGCGCTGGCCACCTTaGTTAGGCTCAGGTTCGGCACTTTGCTGCTTTGCACTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: GCRKGCARGPRRWPP*LGSGSALCCFALQS
Trigger: ACTTTGAAGTGCAAAGCAGCAAAGTGCCGAACCTGAGCCTAATCAAGGTGGCCAGCGCCTTGGACCGCGAGCGCATCCCTTCCTACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp AGAAGCGCACTGTTCCGTTGTCACCCAGGTCCCCGTCAGTTGCCCTaGGCATCAACAGTTCTGTCCCTGTTGGGGCATTCTCAACCACAG +
Preference number: 5 (lower is better)
Translates to: RSALFRCHPGPRQLP*ASTVLSLLGHSQPQ
Trigger: CTGTGGTTGAGAATGCCCCAACAGGGACAGAACTGTTGATGCTCAGGGCAACTGACGGGGACCTGGGTGACAACGGAACAGTGCGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 90 bp GGGCCCCAGTTCAAAAGGTTGTCCCAGTTGAAAGTCCCTGCTTGCTaGCCTAGCTTCATGGGCAGTGTGTTGTCAGCAGTGCCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: GPQFKRLSQLKVPAC*PSFMGSVLSAVPGA
Trigger: AGCACCAGGCACTGCTGACAACACACTGCCCATGAAGCTAGGGCAGCAAGCAGGGACTTTCAACTGGGACAACCTTTTGAACTGGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp CCAGGGCCCCAGTTCAAAAGGTTGTCCCAGTTGAAAGTCCCTGCTTaGTGCCCTAGCTTCATGGGCAGTGTGTTGTCAGCAGTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: PGPQFKRLSQLKVPA*CPSFMGSVLSAVPG
Trigger: ACCAGGCACTGCTGACAACACACTGCCCATGAAGCTAGGGCAGCAAGCAGGGACTTTCAACTGGGACAACCTTTTGAACTGGGGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp GTCCGGCACAAACAACAGCCAGGGCTCCTCGGCATTTTTCACCTCTaGCGGGGCGCCTGCCGACCCATTATTTGTACATCCAAATCGAAC +
Preference number: 5 (lower is better)
Translates to: VRHKQQPGLLGIFHL*RGACRPIICTSKSN
Trigger: GTTCGATTTGGATGTACAAATAATGGGTCGGCAGGCGCCCCGGCAGAGGTGAAAAATGCCGAGGAGCCCTGGCTGTTGTTTGTGCCGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp AGGCTCAGGTTCGGCACTTTGCTGCTTTGCACTTCAAAGTGGCGCTaGTCATTGCCCCCGAGAATTTGCACGGAGATGTTCCCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: RLRFGTLLLCTSKWR*SLPPRICTEMFPLA
Trigger: GGCCAACGGGAACATCTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGCAAAGTGCCGAACCTGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 90 bp GCGCTGGCCACCTTGATTAGGCTCAGGTTCGGCACTTTGCTGCTTTaGACTTCAAAGTGGCGCTGCTCATTGCCCCCGAGAATTTGCACG +
Preference number: 5 (lower is better)
Translates to: ALATLIRLRFGTLLL*TSKWRCSLPPRICT
Trigger: CGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGCAAAGTGCCGAACCTGAGCCTAATCAAGGTGGCCAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 90 bp AGTCCGACTGGAGGAGAAGATTCCAGTGGAATCTGCCCAATCGGCTaGTTTAGGCGACTCCCTGGTCTAGAACCATGTGATGCCATGGCC +
Preference number: 5 (lower is better)
Translates to: SPTGGEDSSGICPIG*FRRLPGLEPCDAMA
Trigger: GGCCATGGCATCACATGGTTCTAGACCAGGGAGTCGCCTAAAGCAGCCGATTGGGCAGATTCCACTGGAATCTTCTCCTCCAGTCGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp CCGTTTGAGCCGATGTCCGAGTCGGTGGCGGTGTCTAAGATGACTTaGCGTCCGCTGCTACTGTCTTCCTTGAAAGTGACCACGATAGAG +
Preference number: 5 (lower is better)
Translates to: PFEPMSESVAVSKMT*RPLLLSSLKVTTIE
Trigger: CTCTATCGTGGTCACTTTCAAGGAAGACAGTAGCAGCGGACGCCAAGTCATCTTAGACACCGCCACCGACTCGGACATCGGCTCAAACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 90 bp CAGGTCCCCGTCAGTTGCCCTGAGCATCAACAGTTCTGTCCCTGTTaGGGCATTCTCAACCACAGACACATCATACCCTTCTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: QVPVSCPEHQQFCPC*GILNHRHIIPFWLA
Trigger: AGCCAGCCAGAAGGGTATGATGTGTCTGTGGTTGAGAATGCCCCAACAGGGACAGAACTGTTGATGCTCAGGGCAACTGACGGGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 90 bp TCAGAAGCCCACTCTAGCGCGCCTCGCCCCTGCCCTCGCTATCTCTaGTTTTATTGTCCCGTGTCAGTTTCACTTTGTAATCCACAAGGC +
Preference number: 5 (lower is better)
Translates to: SEAHSSAPRPCPRYL*FYCPVSVSLCNPQG
Trigger: GCCTTGTGGATTACAAAGTGAAACTGACACGGGACAATAAAAGCAGAGATAGCGAGGGCAGGGGCGAGGCGCGCTAGAGTGGGCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp CCTCTTTGCAATGACACTGCTGCCATGACCAGTAATCCATACATGTaGCACCATGTTGGCATGGGCTGCGAGTACAAGCGCCTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PLCNDTAAMTSNPYM*HHVGMGCEYKRLPA
Trigger: GGCTGGAAGGCGCTTGTACTCGCAGCCCATGCCAACATGGTGGCACATGTATGGATTACTGGTCATGGCAGCAGTGTCATTGCAAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp CATTTATGCGAGCCATTGATGACTGGGGAGGGGAGCCCAGATCTGTaGCCAGAACCAACAGGGAGTAGAAGGCTTGCTCTTCTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: HLCEPLMTGEGSPDL*PEPTGSRRLALLCP
Trigger: TGGACAGAGAAGAGCAAGCCTTCTACTCCCTGTTGGTTCTGGCCACAGATCTGGGCTCCCCTCCCCAGTCATCAATGGCTCGCATAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp CATAATGGCCAAAGCCAGGGCCCCAGTTCAAAAGGTTGTCCCAGTTaGAAGTCCCTGCTTGCTGCCCTAGCTTCATGGGCAGTGTGTTGT +
Preference number: 5 (lower is better)
Translates to: HNGQSQGPSSKGCPS*KSLLAALASWAVCC
Trigger: ACAACACACTGCCCATGAAGCTAGGGCAGCAAGCAGGGACTTTCAACTGGGACAACCTTTTGAACTGGGGCCCTGGCTTTGGCCATTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp GGTTTCTTCTCCTCTTTGGGATTTTTGGCCTTCTTCCCCCTGCACTaGTTACACAGGATCAGGCTAAGGACCAGGAGGGCCAAGACGGTT +
Preference number: 5 (lower is better)
Translates to: GFFSSLGFLAFFPLH*LHRIRLRTRRAKTV
Trigger: AACCGTCTTGGCCCTCCTGGTCCTTAGCCTGATCCTGTGTAACCAGTGCAGGGGGAAGAAGGCCAAAAATCCCAAAGAGGAGAAGAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp GACCATATGAAGGCTGGTAAGTCAAACTGCTTGCTCCTAAGGGCATaGGGGATTGCCTTGCAAAGCCTAGGGGACTGTGCCTCTGGATTG +
Preference number: 5 (lower is better)
Translates to: DHMKAGKSNCLLLRA*GIALQSLGDCASGL
Trigger: CAATCCAGAGGCACAGTCCCCTAGGCTTTGCAAGGCAATCCCCCATGCCCTTAGGAGCAAGCAGTTTGACTTACCAGCCTTCATATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp TTGATTAGGCTCAGGTTCGGCACTTTGCTGCTTTGCACTTCAAAGTaGCGCTGCTCATTGCCCCCGAGAATTTGCACGGAGATGTTCCCG +
Preference number: 5 (lower is better)
Translates to: LIRLRFGTLLLCTSK*RCSLPPRICTEMFP
Trigger: CGGGAACATCTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGCAAAGTGCCGAACCTGAGCCTAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp CGCTGGATTCCTTGTTCTAGACAGTGGCCTTCTGCAGTCCTCCTCTaGAGAAGACCTCCCATGGTCTGCACTGCAGATACTTGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: RWIPCSRQWPSAVLL*RRPPMVCTADTWVS
Trigger: AGAAACCCAAGTATCTGCAGTGCAGACCATGGGAGGTCTTCTTCAGAGGAGGACTGCAGAAGGCCACTGTCTAGAACAAGGAATCCAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp CACCAGCTACCCGCATATCCTGGCAGACACTTGCATAAGAAAGGCTaGAGAGGTTCATTTGCCACGATGATGACTGGAAGACTCTCACGG +
Preference number: 5 (lower is better)
Translates to: HQLPAYPGRHLHKKG*RGSFATMMTGRLSR
Trigger: CCGTGAGAGTCTTCCAGTCATCATCGTGGCAAATGAACCTCTGCAGCCTTTCTTATGCAAGTGTCTGCCAGGATATGCGGGTAGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp TACAGTGGCCTGATCCTTGAGAGGCTGAGGGATCCCCTGATCTGTTaGTATGACTGTAAAGCTAAACACAGCAGTCCCTCTCCGCCTCAT +
Preference number: 5 (lower is better)
Translates to: YSGLILERLRDPLIC*YDCKAKHSSPSPPH
Trigger: ATGAGGCGGAGAGGGACTGCTGTGTTTAGCTTTACAGTCATAGCAACAGATCAGGGGATCCCTCAGCCTCTCAAGGATCAGGCCACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CCA 90 bp GAGACAGAGGGTTGGGAGTTGGGCATGCTGAGTGGCTTAGGGAGCTaGTTCTCAAACCTTGACCATATGAAGGCTGGTAAGTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: ETEGWELGMLSGLGS*FSNLDHMKAGKSNC
Trigger: GCAGTTTGACTTACCAGCCTTCATATGGTCAAGGTTTGAGAACCAGCTCCCTAAGCCACTCAGCATGCCCAACTCCCAACCCTCTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGCCGGGGCCGAAGGTaGGACTGCGGTGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGRGRR*DCGGAR
Trigger: CCTAGCTCCACCGCAGTCCAACCTTCGGCCCCGGCC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCGCCGCCGCCCCTGTaGCGGCTTCAAGCCCGTGGT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPPPPL*RLQARG
Trigger: ACCACGGGCTTGAAGCCGCAACAGGGGCGGCGGCGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp ACAGTATTTCCCAGTGAGTCCCTCTTTGCAATGACACTGCTGCCATaGCCAGTAATCCATACATGTGCCACCATGTTGGCATGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: TVFPSESLFAMTLLP*PVIHTCATMLAWAA
Trigger: CGCAGCCCATGCCAACATGGTGGCACATGTATGGATTACTGGTCATGGCAGCAGTGTCATTGCAAAGAGGGACTCACTGGGAAATACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp TTTTGGTGTGTGGCTGCGGAACTGCTTGTAGTGTTGAATGATGTCTaGATCCGAAGGGGCGATGCTGCTGGCGTTGTCAATGTCATAGTG +
Preference number: 5 (lower is better)
Translates to: FWCVAAELLVVLNDV*IRRGDAAGVVNVIV
Trigger: CACTATGACATTGACAACGCCAGCAGCATCGCCCCTTCGGATGCAGACATCATTCAACACTACAAGCAGTTCCGCAGCCACACACCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp AGCTGGTTCTCAAACCTTGACCATATGAAGGCTGGTAAGTCAAACTaGTTGCTCCTAAGGGCATGGGGGATTGCCTTGCAAAGCCTAGGG +
Preference number: 5 (lower is better)
Translates to: SWFSNLDHMKAGKSN*LLLRAWGIALQSLG
Trigger: CCCTAGGCTTTGCAAGGCAATCCCCCATGCCCTTAGGAGCAAGCAGTTTGACTTACCAGCCTTCATATGGTCAAGGTTTGAGAACCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp GAACTAGCAGTGAATATTTGGAGCGGCGTTCCCTGTCCAACCGCCTaGTTGCTATCAGATCTCCGGATTCTGGGTCGATGCGAAAACTAT +
Preference number: 5 (lower is better)
Translates to: ELAVNIWSGVPCPTA*LLSDLRILGRCENY
Trigger: ATAGTTTTCGCATCGACCCAGAATCCGGAGATCTGATAGCAACCAGGCGGTTGGACAGGGAACGCCGCTCCAAATATTCACTGCTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp CCTGGAATACTGAAGAGGCTGGTAACTCCTGAAGTAAGGGAGCAGTaGAAGCTGTCTAACACATCTGGATCCTGTGGCTTCACAGAGCCT +
Preference number: 5 (lower is better)
Translates to: PGILKRLVTPEVREQ*KLSNTSGSCGFTEP
Trigger: AGGCTCTGTGAAGCCACAGGATCCAGATGTGTTAGACAGCTTCCACTGCTCCCTTACTTCAGGAGTTACCAGCCTCTTCAGTATTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp CCCAGCAGATATGCTATATTTGACAGTACCATTGGTACCCAAGTCTaGGTCAGTGGCAGACACAGTGGTGATGTAGCTACCTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PSRYAIFDSTIGTQV*VSGRHSGDVATSRL
Trigger: GAGCCTGGAGGTAGCTACATCACCACTGTGTCTGCCACTGACCCAGACTTGGGTACCAATGGTACTGTCAAATATAGCATATCTGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGAGGGCCAAGACGGTaGCGCAGCTGCCCACGATGG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGGPRR*RSCPRW
Trigger: CCATCGTGGGCAGCTGCGCAACCGTCTTGGCCCTCC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGCCGGGGCCGAAGGTaGGACTGCGGTGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGRGRR*DCGGAR
Trigger: CCTAGCTCCACCGCAGTCCAACCTTCGGCCCCGGCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCGCCGCCGCCCCTGTaGCGGCTTCAAGCCCGTGGT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPPPPL*RLQARG
Trigger: ACCACGGGCTTGAAGCCGCAACAGGGGCGGCGGCGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp TTGACACCTTCATCAGGGTCCACAGCTTTGGCCTGGAAAATGCTGTaGCCTGCCTGCCAATTCTCCACCACATTTACACTCTCTATTGCC +
Preference number: 5 (lower is better)
Translates to: LTPSSGSTALAWKML*PACQFSTTFTLSIA
Trigger: GGCAATAGAGAGTGTAAATGTGGTGGAGAATTGGCAGGCAGGTCACAGCATTTTCCAGGCCAAAGCTGTGGACCCTGATGAAGGTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS GCA 90 bp GTGACGAGAGCATTTGCACCCTCATCAGCATCCATGGCTGTCAGCTaGATAATCTTAGAGCCATCTCCAATGTTCTCCTCTACCGTGAGA +
Preference number: 5 (lower is better)
Translates to: VTRAFAPSSASMAVS*IILEPSPMFSSTVR
Trigger: TCTCACGGTAGAGGAGAACATTGGAGATGGCTCTAAGATTATGCAGCTGACAGCCATGGATGCTGATGAGGGTGCAAATGCTCTCGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp ACCTTCATCAGGGTCCACAGCTTTGGCCTGGAAAATGCTGTGACCTaGCTGCCAATTCTCCACCACATTTACACTCTCTATTGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: TFIRVHSFGLENAVT*LPILHHIYTLYCLK
Trigger: CTTCAGGCAATAGAGAGTGTAAATGTGGTGGAGAATTGGCAGGCAGGTCACAGCATTTTCCAGGCCAAAGCTGTGGACCCTGATGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS GCA 90 bp ATCCACCAGGTAAAGACATGCTCCTTGCTCCCGGTCCAGAATGGCTaGGGTCTGAATTATACCAGTATGTCGTCCAATAGTAAAGAGGCG +
Preference number: 5 (lower is better)
Translates to: IHQVKTCSLLPVQNG*GLNYTSMSSNSKEA
Trigger: CGCCTCTTTACTATTGGACGACATACTGGTATAATTCAGACCGCAGCCATTCTGGACCGGGAGCAAGGAGCATGTCTTTACCTGGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CCA 90 bp GCGTTCCCTGTCCAACCGCCTGGTTGCTATCAGATCTCCGGATTCTaGGTCGATGCGAAAACTATCATCAGCTCCACTAATGATAGTGTA +
Preference number: 5 (lower is better)
Translates to: AFPVQPPGCYQISGF*VDAKTIISSTNDSV
Trigger: TACACTATCATTAGTGGAGCTGATGATAGTTTTCGCATCGACCCAGAATCCGGAGATCTGATAGCAACCAGGCGGTTGGACAGGGAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp GGCAGGACCTGTGCTCAGCAAGTAATAAGTAAAGGGACCTTGATTTaGAGGGAGATCAGGGTCAGTGGACTGAAGGGTCATCACCAAAGT +
Preference number: 5 (lower is better)
Translates to: GRTCAQQVISKGTLI*REIRVSGLKGHHQS
Trigger: ACTTTGGTGATGACCCTTCAGTCCACTGACCCTGATCTCCCTCCAAATCAAGGTCCCTTTACTTATTACTTGCTGAGCACAGGTCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp TTGCTAAGGACAGTCAGATCAAACGTGCCATCTGTGGACCTTGGCTaGGAATTCAGATCACAAGTACCCCCTGGAATACTGAAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LLRTVRSNVPSVDLG*EFRSQVPPGILKRL
Trigger: CAGCCTCTTCAGTATTCCAGGGGGTACTTGTGATCTGAATTCCCAGCCAAGGTCCACAGATGGCACGTTTGATCTGACTGTCCTTAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp CCACAGATTCCACCTTTACTCCACTCTGCCGGAGAAGGATCTCTTTaGTGCTTTCAAAGAAGGTGGCTACGCCACTGGGATTCACATACT +
Preference number: 5 (lower is better)
Translates to: PQIPPLLHSAGEGSL*CFQRRWLRHWDSHT
Trigger: AGTATGTGAATCCCAGTGGCGTAGCCACCTTCTTTGAAAGCATCAAAGAGATCCTTCTCCGGCAGAGTGGAGTAAAGGTGGAATCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp GTGAAGCCATCTGGGCAGCTGCATGAAAATCCTCCCACTAAATTGTaGCAGGTTCCACCACTGTGGCAAGGTGATGGAAGACATTCATCT +
Preference number: 5 (lower is better)
Translates to: VKPSGQLHENPPTKL*QVPPLWQGDGRHSS
Trigger: AGATGAATGTCTTCCATCACCTTGCCACAGTGGTGGAACCTGTCACAATTTAGTGGGAGGATTTTCATGCAGCTGCCCAGATGGCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp TGCCTTGTGCTGCCAAAGCTTGGCTGGGTTCCAGAGGCCTTCCATTaGCTGCAAACTCCATTATACACCCAACAAAATCATGGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: CLVLPKLGWVPEAFH*LQTPLYTQQNHGFP
Trigger: TGGAAAGCCATGATTTTGTTGGGTGTATAATGGAGTTTGCAGTCAATGGAAGGCCTCTGGAACCCAGCCAAGCTTTGGCAGCACAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp TGTTTGGGCATCTCGATGTGCTTGATTGGGTGGAATTCCTCCAAGTaGTATAGTAAGCACATCAAGGCCACCGAAGTCCTGAGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: CLGISMCLIGWNSSK*YSKHIKATEVLSRV
Trigger: CACCCTACTCAGGACTTCGGTGGCCTTGATGTGCTTACTATATCACTTGGAGGAATTCCACCCAATCAAGCACATCGAGATGCCCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp TCCCGGAGGCGCCTCCTCGCTCAGGTTCACTCTGTACACTTGCTGTaGAAAGACAGGAGGATGGTCATTGATGTCATTAACAAAAATCAC +
Preference number: 5 (lower is better)
Translates to: SRRRLLAQVHSVHLL*KDRRMVIDVINKNH
Trigger: GTGATTTTTGTTAATGACATCAATGACCATCCTCCTGTCTTTTCACAGCAAGTGTACAGAGTGAACCTGAGCGAGGAGGCGCCTCCGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp TGGTCGATTTCCTCCTTTCAGGCCCAAGGTCTGTTGCTGAAACTATaGGATTGTAGATCAACTGTGAAGGCACCAACGCTGAAGCCACTC +
Preference number: 5 (lower is better)
Translates to: WSISSFQAQGLLLKL*DCRSTVKAPTLKPL
Trigger: GAGTGGCTTCAGCGTTGGTGCCTTCACAGTTGATCTACAATCTCATAGTTTCAGCAACAGACCTTGGGCCTGAAAGGAGGAAATCGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS GCA 90 bp TTGTGCTGCCAAAGCTTGGCTGGGTTCCAGAGGCCTTCCATTGACTaGAAACTCCATTATACACCCAACAAAATCATGGCTTTCCACGTG +
Preference number: 5 (lower is better)
Translates to: LCCQSLAGFQRPSID*KLHYTPNKIMAFHV
Trigger: CACGTGGAAAGCCATGATTTTGTTGGGTGTATAATGGAGTTTGCAGTCAATGGAAGGCCTCTGGAACCCAGCCAAGCTTTGGCAGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp ATCAGTCACAGTGACAAGCACACTGGTGGAACTGGAAAGAGGCTCTaGGGATCCCGCATCACTGCAGACCACTACCAAAGTATAATTATC +
Preference number: 5 (lower is better)
Translates to: ISHSDKHTGGTGKRL*GSRITADHYQSIII
Trigger: GATAATTATACTTTGGTAGTGGTCTGCAGTGATGCGGGATCCCCAGAGCCTCTTTCCAGTTCCACCAGTGTGCTTGTCACTGTGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000509444.1
ENST00000674496.2
CDS CCA 90 bp CATTCACATCTAGGAGAGTTACTACAAGCTGGGCATAGGACACCTTaGGGTGAACTCCCTGGTCCCGGGCACTTATATTCAGAACAATCT +
Preference number: 5 (lower is better)
Translates to: HSHLGELLQAGHRTP*GELPGPGHLYSEQS
Trigger: AGATTGTTCTGAATATAAGTGCCCGGGACCAGGGAGTTCACCCCAAGGTGTCCTATGCCCAGCTTGTAGTAACTCTCCTAGATGTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGAGGGCCAAGACGGTaGCGCAGCTGCCCACGATGG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGGPRR*RSCPRW
Trigger: CCATCGTGGGCAGCTGCGCAACCGTCTTGGCCCTCC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTCTCTCCTTCACAGTaGGCAGCGGAGGCGGCGAAG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLSPSQ*AAEAAK
Trigger: CTTCGCCGCCTCCGCTGCCAACTGTGAAGGAGAGAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp TCAAGCCATTCATCGCTGCATCTCTATCTCTTGCAGAAACAGTTCTaGCAATGGACCCAATGCTATGGCTCTCAGGGATGGTTGCACTCA +
Preference number: 5 (lower is better)
Translates to: SSHSSLHLYLLQKQF*QWTQCYGSQGWLHS
Trigger: TGAGTGCAACCATCCCTGAGAGCCATAGCATTGGGTCCATTGTCAGAACTGTTTCTGCAAGAGATAGAGATGCAGCGATGAATGGCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp GCCAAAAGAAACGTTCTATTGTTCTCTTCATATGCACTGTACAGTTaGACAGCAGTCCCTAAGCCTGTCAGCTGTGAGCTGGCAATGCGT +
Preference number: 5 (lower is better)
Translates to: AKRNVLLFSSYALYS*TAVPKPVSCELAMR
Trigger: ACGCATTGCCAGCTCACAGCTGACAGGCTTAGGGACTGCTGTGCAACTGTACAGTGCATATGAAGAGAACAATAGAACGTTTCTTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp ATCATTGCTAAGGACAGTCAGATCAAACGTGCCATCTGTGGACCTTaGCTGGGAATTCAGATCACAAGTACCCCCTGGAATACTGAAGAG +
Preference number: 5 (lower is better)
Translates to: IIAKDSQIKRAICGP*LGIQITSTPWNTEE
Trigger: CTCTTCAGTATTCCAGGGGGTACTTGTGATCTGAATTCCCAGCCAAGGTCCACAGATGGCACGTTTGATCTGACTGTCCTTAGCAATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp AGTGAAAGATTCATGGGAGTCACTATCAGAAGAGGATTCTGGAGCTaGAATGCCATCCGCTGGATTCCTTGTTCTAGACAGTGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: SERFMGVTIRRGFWS*NAIRWIPCSRQWPS
Trigger: AGAAGGCCACTGTCTAGAACAAGGAATCCAGCGGATGGCATTCCAGCTCCAGAATCCTCTTCTGATAGTGACTCCCATGAATCTTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCACCCCAGCAGGGGTaGCTGGCACAAATGTTCGGG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSPQQG*LAQMFG
Trigger: CCCGAACATTTGTGCCAGCAACCCCTGCTGGGGTGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTTGCTCTTCCAGCACTaGGAACACCTGGCGCGGCTC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLLFQH*EHLARL
Trigger: GAGCCGCGCCAGGTGTTCCAAGTGCTGGAAGAGCAA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGGAAAACGGGGGCGTaGTCATTGAGGTCCCGCACC +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGKTGA*SLRSRT
Trigger: GGTGCGGGACCTCAATGACAACGCCCCCGTTTTCCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCGGTCCAGTCCGCCCTaGGACACCAGATGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSRSSPP*DTRCRN
Trigger: GTTCCTGCATCTGGTGTCCAAGGGCGGACTGGACCG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCACGGAGATGTTCCCGTaGGCCGCGGGAGAATCTGCG +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSTEMFP*AAGESA
Trigger: CGCAGATTCTCCCGCGGCCAACGGGAACATCTCCGT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp TCTCCAGGAGGAAAGCTAGGAGGATTGTCATTAAAGTCCCTCACGTaGATAACCACTGACATTGTAGATGAACGAGGAGGTCTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SPGGKLGGLSLKSLT*ITTDIVDERGGLPW
Trigger: CCAAGGAAGACCTCCTCGTTCATCTACAATGTCAGTGGTTATTCACGTGAGGGACTTTAATGACAATCCTCCTAGCTTTCCTCCTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS GCA 90 bp GCACACTGGTGGAACTGGAAAGAGGCTCTGGGGATCCCGCATCACTaGAGACCACTACCAAAGTATAATTATCTTTTGTTTCCCTATCTA +
Preference number: 5 (lower is better)
Translates to: AHWWNWKEALGIPHH*RPLPKYNYLLFPYL
Trigger: TAGATAGGGAAACAAAAGATAATTATACTTTGGTAGTGGTCTGCAGTGATGCGGGATCCCCAGAGCCTCTTTCCAGTTCCACCAGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000509444.1
ENST00000674496.2
CDS GCA 90 bp TTGAGGAACACCAGAATCCTTGGTAACCACAGACAGATAGAAGTCTaGAATCTGCTCTCTGTCAATCTCTCTGGTTGTGCTCAGAACTCC +
Preference number: 5 (lower is better)
Translates to: LRNTRILGNHRQIEV*NLLSVNLSGCAQNS
Trigger: GGAGTTCTGAGCACAACCAGAGAGATTGACAGAGAGCAGATTGCAGACTTCTATCTGTCTGTGGTTACCAAGGATTCTGGTGTTCCTCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp GTGTATCCAGTTTTGCAAACACAGTTGAAGCTTCCTGGAAAATTCTaGCAGATGGCACCATTCTTGCAAGGACTCTGCAGGCACTCATTG +
Preference number: 5 (lower is better)
Translates to: VYPVLQTQLKLPGKF*QMAPFLQGLCRHSL
Trigger: CAATGAGTGCCTGCAGAGTCCTTGCAAGAATGGTGCCATCTGCCAGAATTTTCCAGGAAGCTTCAACTGTGTTTGCAAAACTGGATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp TCATCTGAAACTGCCACATTACTGACAGTACAATATCCTGGCTCTTaGTTCTCAGAACAGGAGTCCACAGTTAAGGAGGCTGCCATTCCT +
Preference number: 5 (lower is better)
Translates to: SSETATLLTVQYPGS*FSEQESTVKEAAIP
Trigger: AGGAATGGCAGCCTCCTTAACTGTGGACTCCTGTTCTGAGAACCAAGAGCCAGGATATTGTACTGTCAGTAATGTGGCAGTTTCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp GTTCTCCTCTACCGTGAGATCCAGCATGTCCGTTGGAAATACTGGTaGATTGTCATTGATATCCTGAAGTGTTATTTCTACCCGCAGCGA +
Preference number: 5 (lower is better)
Translates to: VLLYREIQHVRWKYW*IVIDILKCYFYPQR
Trigger: TCGCTGCGGGTAGAAATAACACTTCAGGATATCAATGACAATCCACCAGTATTTCCAACGGACATGCTGGATCTCACGGTAGAGGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCATGGGGGATTGCCTaGCAAAGCCTAGGGGACTGT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFAWGIA*QSLGDC
Trigger: ACAGTCCCCTAGGCTTTGCAAGGCAATCCCCCATGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGTCGAGACAGAGGGTaGGGAGTTGGGCATGCTGAG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFCRDRG*GVGHAE
Trigger: CTCAGCATGCCCAACTCCCAACCCTCTGTCTCGACA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGAAAGGACCACCAGGTaGATCACGTCGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSERTTR*ITSLGR
Trigger: CCTGCCCAGCGACGTGATCAACCTGGTGGTCCTTTC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGTGGTCCACACCGTTaGAGCCGATGTCCGAGTCGG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGGPHR*SRCPSR
Trigger: CCGACTCGGACATCGGCTCAAACGGTGTGGACCACC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCACCGTAAGCGAGTATaGGCGCCGAGCTTCGAAGTC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFHRKRV*APSFEV
Trigger: GACTTCGAAGCTCGGCGCCAATACTCGCTTACGGTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAGTGGCGCTGCTCATaGCCCCCGAGAATTTGCACG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKWRCS*PPRICT
Trigger: CGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAAGCGCACTGTTCCGTaGTCACCCAGGTCCCCGTCA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSKRTVP*SPRSPS
Trigger: TGACGGGGACCTGGGTGACAACGGAACAGTGCGCTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp GAAAATCCAGCAAAGAAAACTCGGATGTTGCTCGTGACTGTGCTGTaGACTCCATCATTGCTAAGGACAGTCAGATCAAACGTGCCATCT +
Preference number: 5 (lower is better)
Translates to: ENPAKKTRMLLVTVL*TPSLLRTVRSNVPS
Trigger: AGATGGCACGTTTGATCTGACTGTCCTTAGCAATGATGGAGTTCACAGCACAGTCACGAGCAACATCCGAGTTTTCTTTGCTGGATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp AACAGTTCTGACAATGGACCCAATGCTATGGCTCTCAGGGATGGTTaGACTCATGTGGCTTTGAGAGAATTCAGGTGTATGGTAGTTTTC +
Preference number: 5 (lower is better)
Translates to: NSSDNGPNAMALRDG*THVALREFRCMVVF
Trigger: GAAAACTACCATACACCTGAATTCTCTCAAAGCCACATGAGTGCAACCATCCCTGAGAGCCATAGCATTGGGTCCATTGTCAGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp AAAGACACCTGTGTATCCAGTTTTGCAAACACAGTTGAAGCTTCCTaGAAAATTCTGGCAGATGGCACCATTCTTGCAAGGACTCTGCAG +
Preference number: 5 (lower is better)
Translates to: KDTCVSSFANTVEAS*KILADGTILARTLQ
Trigger: CTGCAGAGTCCTTGCAAGAATGGTGCCATCTGCCAGAATTTTCCAGGAAGCTTCAACTGTGTTTGCAAAACTGGATACACAGGTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335110.5
CDS CCA 90 bp CCTGTTGGGGCATTCTCAACCACAGACACATCATACCCTTCTGGCTaGCTAAATACTGGCTTTTCATCATTCACATCTAGGAGAGTTACT +
Preference number: 5 (lower is better)
Translates to: PVGAFSTTDTSYPSG*LNTGFSSFTSRRVT
Trigger: AGTAACTCTCCTAGATGTGAATGATGAAAAGCCAGTATTTAGCCAGCCAGAAGGGTATGATGTGTCTGTGGTTGAGAATGCCCCAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGCTCTCAGGGATGGTaGCACTCATGTGGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGSQGW*HSCGFE
Trigger: CTCAAAGCCACATGAGTGCAACCATCCCTGAGAGCC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTCACCCCAGCAGGGGTaGCTGGCACAAATGTTCGGG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISPQQG*LAQMFG
Trigger: CCCGAACATTTGTGCCAGCAACCCCTGCTGGGGTGA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGTAAGTCAAACTGCTaGCTCCTAAGGGCATGGGGG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGKSNC*LLRAWG
Trigger: CCCCCATGCCCTTAGGAGCAAGCAGTTTGACTTACC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTACAGAGGGTTGGGAGTaGGGCATGCTGAGTGGCTTA +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFTEGWE*GMLSGL
Trigger: TAAGCCACTCAGCATGCCCAACTCCCAACCCTCTGT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTAGGGCGAGGTGTGTaGAGCCTCTCCACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLGRGV*SLSTSS
Trigger: TGAAGAAGTGGAGAGGCTCAACACACCTCGCCCTAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCGCTTAGGCTCACCCTaGTCCTCCACCTCAACCAGG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRLGSP*SSTSTR
Trigger: CCTGGTTGAGGTGGAGGACAAGGGTGAGCCTAAGCG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCACCACGGTGCCCACTaGAGCATTCTCATCTACCGA +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFHHGAH*SILIYR
Trigger: TCGGTAGATGAGAATGCTCAAGTGGGCACCGTGGTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAAGGCGCTGGCCACCTaGATTAGGCTCAGGTTCGGC +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISKALAT*IRLRFG
Trigger: GCCGAACCTGAGCCTAATCAAGGTGGCCAGCGCCTT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCAAAAATCACCAGGCTaGCCACAGAAGAGCGCGCCT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFQKSPG*PQKSAP
Trigger: AGGCGCGCTCTTCTGTGGCAAGCCTGGTGATTTTTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCATTTATGCGAGCCATaGATGACTGGGGAGGGGAGC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFHLCEP*MTGEGS
Trigger: GCTCCCCTCCCCAGTCATCAATGGCTCGCATAAATG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp AATGTCGGTGGGTTATCATTTACATCCAACAAAATAATGGAGACTTaGGCAGTGCTTGTGAATCTGGAGGCTGGAATCTGTGGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: NVGGLSFTSNKIMET*AVLVNLEAGICGRS
Trigger: TGACCTGCCACAGATTCCAGCCTCCAGATTCACAAGCACTGCTCAAGTCTCCATTATTTTGTTGGATGTAAATGATAACCCACCGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp TATGACTCCTGTGTTAGGGTCAATGACAAAGAGGTCACTGTCAGATaGCTGTACAGTATACGCAATCACAGCATTTGTTCCAGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: YDSCVRVNDKEVTVR*LYSIRNHSICSRVS
Trigger: GCTGACTCTGGAACAAATGCTGTGATTGCGTATACTGTACAGTCATCTGACAGTGACCTCTTTGTCATTGACCCTAACACAGGAGTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp TTCAGGTGTATGGTAGTTTTCCTCAGTGACAGTTATGTGAACAGTTaGTTGGGAAGAAAGTGGAGGGTTTCCCTTATCCTTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: FRCMVVFLSDSYVNS*LGRKWRVSLILCSD
Trigger: GTCACTGCAAAGGATAAGGGAAACCCTCCACTTTCTTCCCAAGCAACTGTTCACATAACTGTCACTGAGGAAAACTACCATACACCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp TGGTCAAGAAGTCCTTTACTGTTGGTACGCCGAGACGAAGTAAGATaGTGTTATCCACTGTGGCATTGGAAAATCCAGCAAAGAAAACTC +
Preference number: 5 (lower is better)
Translates to: WSRSPLLLVRRDEVR*CYPLWHWKIQQRKL
Trigger: GAGTTTTCTTTGCTGGATTTTCCAATGCCACAGTGGATAACAGCATCTTACTTCGTCTCGGCGTACCAACAGTAAAGGACTTCTTGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp AGTAGTAATGAGATAACTGATGTTGGAATTGAGATCCATGGTGGATaGAGACACACTACCCACATGATATCCCAGCGCCACGTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: SSNEITDVGIEIHGG*RHTTHMISQRHVLK
Trigger: TTTGAGAACGTGGCGCTGGGATATCATGTGGGTAGTGTGTCTGCATCCACCATGGATCTCAATTCCAACATCAGTTATCTCATTACTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS GCA 90 bp TTACTTCTCCATTTGGCCCAAAGTCTTTATCTACAGCACTTACTTTaGCCACAAACGACCCAGCCCTCTGCTCTTCTTCGAAGTAAAATG +
Preference number: 5 (lower is better)
Translates to: LLLHLAQSLYLQHLL*PQTTQPSALLRSKM
Trigger: CATTTTACTTCGAAGAAGAGCAGAGGGCTGGGTCGTTTGTGGGCAAAGTAAGTGCTGTAGATAAAGACTTTGGGCCAAATGGAGAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CCA 90 bp CTTGTTTCCCAAAGGGTTCAGCAGAGTGTACTCAATATAGCTGTTTaGGCCACTATCTGGGTCAGTTGCTTGAGCTTTGAAAACAACAGT +
Preference number: 5 (lower is better)
Translates to: LVSQRVQQSVLNIAV*ATIWVSCLSFENNS
Trigger: ACTGTTGTTTTCAAAGCTCAAGCAACTGACCCAGATAGTGGCCCAAACAGCTATATTGAGTACACTCTGCTGAACCCTTTGGGAAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp TCGCTCAGGTTCACTCTGTACACTTGCTGTGAAAAGACAGGAGGATaGTCATTGATGTCATTAACAAAAATCACCAGGCTTGCCACAGAA +
Preference number: 5 (lower is better)
Translates to: SLRFTLYTCCEKTGG*SLMSLTKITRLATE
Trigger: TTCTGTGGCAAGCCTGGTGATTTTTGTTAATGACATCAATGACCATCCTCCTGTCTTTTCACAGCAAGTGTACAGAGTGAACCTGAGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 90 bp GTTCTCAAAAACCACAAAGCTGTAGGCAACCTGACTGAATACAGGTaGGTTGTCTTGAGTGTCCAATACAGTGATGGTTACTATTGCCTG +
Preference number: 5 (lower is better)
Translates to: VLKNHKAVGNLTEYR*VVLSVQYSDGYYCL
Trigger: CAGGCAATAGTAACCATCACTGTATTGGACACTCAAGACAACCCACCTGTATTCAGTCAGGTTGCCTACAGCTTTGTGGTTTTTGAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 90 bp GTTCTCCTCTACCGTGAGATCCAGCATGTCCGTTGGAAATACTGGTaGATTGTCATTGATATCCTGAAGTGTTATTTCTACCTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VLLYREIQHVRWKYW*IVIDILKCYFYLCS
Trigger: AGAGCAGAGGTAGAAATAACACTTCAGGATATCAATGACAATCCACCAGTATTTCCAACGGACATGCTGGATCTCACGGTAGAGGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 90 bp AATGTTCTCCTCTACCGTGAGATCCAGCATGTCCGTTGGAAATACTaGTGGATTGTCATTGATATCCTGAAGTGTTATTTCTACCCGCAG +
Preference number: 5 (lower is better)
Translates to: NVLLYREIQHVRWKY*WIVIDILKCYFYPQ
Trigger: CTGCGGGTAGAAATAACACTTCAGGATATCAATGACAATCCACCAGTATTTCCAACGGACATGCTGGATCTCACGGTAGAGGAGAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTACTAGCAGTGAATATTaGGAGCGGCGTTCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFTSSEY*ERRSLS
Trigger: GGACAGGGAACGCCGCTCCAAATATTCACTGCTAGT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGCCATCTGTGGACCTaGGCTGGGAATTCAGATCAC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFCHLWT*AGNSDH
Trigger: GTGATCTGAATTCCCAGCCAAGGTCCACAGATGGCA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTCTGCAGGCACTCATaGATATCTCTCTCACACGCC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLCRHS*ISLSHA
Trigger: GGCGTGTGAGAGAGATATCAATGAGTGCCTGCAGAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGCATGGGGGATTGCCTaGCAAAGCCTAGGGGACTGT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIAWGIA*QSLGDC
Trigger: ACAGTCCCCTAGGCTTTGCAAGGCAATCCCCCATGC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCACAGAGGGTTGGGAGTaGGGCATGCTGAGTGGCTTA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSTEGWE*GMLSGL
Trigger: TAAGCCACTCAGCATGCCCAACTCCCAACCCTCTGT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTGTCGAGACAGAGGGTaGGGAGTTGGGCATGCTGAG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSICRDRG*GVGHAE
Trigger: CTCAGCATGCCCAACTCCCAACCCTCTGTCTCGACA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCGGCACTTTGCTGCTTaGCACTTCAAAGTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSRHFAA*HFKVAL
Trigger: CAGCGCCACTTTGAAGTGCAAAGCAGCAAAGTGCCG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCTACAGCACTTACTTaGCCCACAAACGACCCAGCC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSTALT*PTNDPA
Trigger: GGCTGGGTCGTTTGTGGGCAAAGTAAGTGCTGTAGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCACATGTGCCACCATGTaGGCATGGGCTGCGAGTACA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSTCATM*AWAAST
Trigger: TGTACTCGCAGCCCATGCCAACATGGTGGCACATGT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp TACCTTCAGCTGATAAAAGGATTGCTCTTCTCTATCAATCACATTTaGTGTGGTAAGCTGCCCAGTGACCTGGTTGATAGCAAACATACC +
Preference number: 5 (lower is better)
Translates to: YLQLIKGLLFSINHI*CGKLPSDLVDSKHT
Trigger: GGTATGTTTGCTATCAACCAGGTCACTGGGCAGCTTACCACAGCAAATGTGATTGATAGAGAAGAGCAATCCTTTTATCAGCTGAAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CCA 90 bp AGGGTTCAGCAGAGTGTACTCAATATAGCTGTTTGGGCCACTATCTaGGTCAGTTGCTTGAGCTTTGAAAACAACAGTATCAATAGGTGT +
Preference number: 5 (lower is better)
Translates to: RVQQSVLNIAVWATI*VSCLSFENNSINRC
Trigger: ACACCTATTGATACTGTTGTTTTCAAAGCTCAAGCAACTGACCCAGATAGTGGCCCAAACAGCTATATTGAGTACACTCTGCTGAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp TTCCAAAGTATTACCATCCCTTATAGGAAGATGCAATTCCCTTGCTaGGCTGTTTCTATAGAACGTAGAAGATTTGGAGAAAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: FQSITIPYRKMQFPC*AVSIERRRFGERGW
Trigger: CCAGCCCCTTTCTCCAAATCTTCTACGTTCTATAGAAACAGCCCAGCAAGGGAATTGCATCTTCCTATAAGGGATGGTAATACTTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp AATGTTCTCCTCTACCGTGAGATCCAGCATGTCCGTTGGAAATACTaGTGGATTGTCATTGATATCCTGAAGTGTTATTTCTACCTCTGC +
Preference number: 5 (lower is better)
Translates to: NVLLYREIQHVRWKY*WIVIDILKCYFYLC
Trigger: GCAGAGGTAGAAATAACACTTCAGGATATCAATGACAATCCACCAGTATTTCCAACGGACATGCTGGATCTCACGGTAGAGGAGAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTGTCCAACCGCCTGGTaGCTATCAGATCTCCGGATT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSCPTAW*LSDLRI
Trigger: AATCCGGAGATCTGATAGCAACCAGGCGGTTGGACA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTTGGGTCCACTGTCCTaGTCCATTGCCGAAACAGTA +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLGPLS*SIAETV
Trigger: TACTGTTTCGGCAATGGACAAGGACAGTGGACCCAA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCTCTGCAGGCACTCATaGATATCTCTCTCACACGCC +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLCRHS*ISLSHA
Trigger: GGCGTGTGAGAGAGATATCAATGAGTGCCTGCAGAG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAGATGGCACCATTCTaGCAAGGACTCTGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQMAPF*QGLCRH
Trigger: GTGCCTGCAGAGTCCTTGCAAGAATGGTGCCATCTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCAGATGGCACCATTCTaGCAAGGACTCTGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIQMAPF*QGLCRH
Trigger: GTGCCTGCAGAGTCCTTGCAAGAATGGTGCCATCTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGCATCTCGATGTGCTaGATTGGGTGGAATTCCTCC +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGISMC*IGWNSS
Trigger: GGAGGAATTCCACCCAATCAAGCACATCGAGATGCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTCCTCTTTGGGATTTTaGGCCTTCTTCCCCCTGCAC +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSSLGF*AFFPLH
Trigger: GTGCAGGGGGAAGAAGGCCAAAAATCCCAAAGAGGA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGGTAAGTCAAACTGCTaGCTCCTAAGGGCATGGGGG +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISGKSNC*LLRAWG
Trigger: CCCCCATGCCCTTAGGAGCAAGCAGTTTGACTTACC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGTTGAAAATGCCAGGTaGGCAGGTGTCACCATGCAT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFVENAR*AGVTMH
Trigger: ATGCATGGTGACACCTGCCAACCTGGCATTTTCAAC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAGAGTGCCTGGAGGTaGCTCTTCCAGCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQSAWR*LFQHLE
Trigger: TTCCAAGTGCTGGAAGAGCAACCTCCAGGCACTCTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAGGGAGTAGAAGGCTaGCTCTTCTCTGTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQGVEG*LFSVQG
Trigger: TCCTTGGACAGAGAAGAGCAAGCCTTCTACTCCCTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGTAAAGACATGCTCCTaGCTCCCGGTCCAGAATGGC +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIVKTCS*LPVQNG
Trigger: GCCATTCTGGACCGGGAGCAAGGAGCATGTCTTTAC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp TCATTCACATCACTGACAGTGATATTAATTCTCATATCCGAGGACTaGAGACCATCATCAGCACGAACTAGCAGTGAATATTTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: SFTSLTVILILISED*RPSSARTSSEYLER
Trigger: CCGCTCCAAATATTCACTGCTAGTTCGTGCTGATGATGGTCTTCAGTCCTCGGATATGAGAATTAATATCACTGTCAGTGATGTGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp TATATACCATTGGCTTCTCCCTGTCATATTCCATTTCTGAGCAAGTaGAAGATTCATGGGAGTCACTATCAGAAGAGGATTCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: YIPLASPCHIPFLSK*KIHGSHYQKRILEL
Trigger: CAGCTCCAGAATCCTCTTCTGATAGTGACTCCCATGAATCTTTCACTTGCTCAGAAATGGAATATGACAGGGAGAAGCCAATGGTATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp AACAATGCCATAGCGAACCTGTCCATTTGTGCCTTCATCTCCATCTaGTGCGAACACTTGTATTATATCTGTTCCAGTAAGTGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: NNAIANLSICAFISI*CEHLYYICSSKCVF
Trigger: GAAAACACACTTACTGGAACAGATATAATACAAGTGTTCGCAGCAGATGGAGATGAAGGCACAAATGGACAGGTTCGCTATGGCATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp CATTTCCAAAGTATTACCATCCCTTATAGGAAGATGCAATTCCCTTaGTGGGCTGTTTCTATAGAACGTAGAAGATTTGGAGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: HFQSITIPYRKMQFP*WAVSIERRRFGERG
Trigger: GCCCCTTTCTCCAAATCTTCTACGTTCTATAGAAACAGCCCAGCAAGGGAATTGCATCTTCCTATAAGGGATGGTAATACTTTGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp CATCTGGGAATATGCCAAAAGCATCCCCTGTATTTCCTTCAGCAATaGTGTATGCAATTTCACCATTTGCTCCTGAATCCTTATCAGAAG +
Preference number: 5 (lower is better)
Translates to: HLGICQKHPLYFLQQ*CMQFHHLLLNPYQK
Trigger: CTTCTGATAAGGATTCAGGAGCAAATGGTGAAATTGCATACACCATTGCTGAAGGAAATACAGGGGATGCTTTTGGCATATTCCCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGTCCAACCGCCTGGTaGCTATCAGATCTCCGGATT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCPTAW*LSDLRI
Trigger: AATCCGGAGATCTGATAGCAACCAGGCGGTTGGACA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCTGATGGTAGTAAATaGTCCCCCACCATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSDGSK*SPTIFC
Trigger: GCAGAAGATGGTGGGGGACAATTTACTACCATCAGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTACTCAATATAGCTGTTaGGGCCACTATCTGGGTCAG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFTQYSC*GHYLGQ
Trigger: CTGACCCAGATAGTGGCCCAAACAGCTATATTGAGT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGTCCCAATACTGAACTaGTTTCCCAAAGGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFVPILN*FPKGFS
Trigger: GCTGAACCCTTTGGGAAACAAGTTCAGTATTGGGAC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGCGAACCTGTCCATTaGTGCCTTCATCTCCATCTG +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSEPVH*CLHLHL
Trigger: CAGATGGAGATGAAGGCACAAATGGACAGGTTCGCT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGACAAAGCGCTCTTTaGTTTCCCGATCCAGACTCT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRQSAL*FPDPDS
Trigger: AGAGTCTGGATCGGGAAACAAAAGAGCGCTTTGTCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTGCGCTGGTGATGATTaGTCCTGTCGATGGGTTGAT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSCAGDD*SCRWVD
Trigger: ATCAACCCATCGACAGGACAAATCATCACCAGCGCA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTGGGTCCACTGTCCTaGTCCATTGCCGAAACAGTA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLGPLS*SIAETV
Trigger: TACTGTTTCGGCAATGGACAAGGACAGTGGACCCAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGCCATCTGTGGACCTaGGCTGGGAATTCAGATCAC +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCHLWT*AGNSDH
Trigger: GTGATCTGAATTCCCAGCCAAGGTCCACAGATGGCA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGAAGTCCTTTACTGTaGGTACGCCGAGACGAAGTA +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRSPLL*VRRDEV
Trigger: TACTTCGTCTCGGCGTACCAACAGTAAAGGACTTCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGCATCTCGATGTGCTaGATTGGGTGGAATTCCTCC +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGISMC*IGWNSS
Trigger: GGAGGAATTCCACCCAATCAAGCACATCGAGATGCC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATCAAAACCTGCTGTTaGGGCATCTCGATGTGCTTG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFIKTCC*GISMCL
Trigger: CAAGCACATCGAGATGCCCAAACAGCAGGTTTTGAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTGAGGGATCTGTTTTaGAGATGGAGGCCAAGCTAT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLRDLF*RWRPSY
Trigger: ATAGCTTGGCCTCCATCTCAAAAACAGATCCCTCAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCCTCTTTGGGATTTTaGGCCTTCTTCCCCCTGCAC +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSSLGF*AFFPLH
Trigger: GTGCAGGGGGAAGAAGGCCAAAAATCCCAAAGAGGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGTTGAAAATGCCAGGTaGGCAGGTGTCACCATGCAT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSVENAR*AGVTMH
Trigger: ATGCATGGTGACACCTGCCAACCTGGCATTTTCAAC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTGCCGACCCATTATTaGTACATCCAAATCGAACGC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLPTHY*YIQIER
Trigger: GCGTTCGATTTGGATGTACAAATAATGGGTCGGCAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATTGCCCCCGAGAATTaGCACGGAGATGTTCCCGTT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISIAPEN*HGDVPV
Trigger: AACGGGAACATCTCCGTGCAAATTCTCGGGGGCAAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp ATTATACACCCAACAAAATCATGGCTTTCCACGTGTCCTCTTCTCTaGAGGATTGGTTCTAGAGATCTGATACCTCCAACTGTAACTCTA +
Preference number: 5 (lower is better)
Translates to: IIHPTKSWLSTCPLL*RIGSRDLIPPTVTL
Trigger: TAGAGTTACAGTTGGAGGTATCAGATCTCTAGAACCAATCCTTCAGAGAAGAGGACACGTGGAAAGCCATGATTTTGTTGGGTGTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp ATTCCTCCAAGTGATATAGTAAGCACATCAAGGCCACCGAAGTCCTaGGTAGGGTGGATAATATCTCTGTTATATATTCTGTCAACAGAC +
Preference number: 5 (lower is better)
Translates to: IPPSDIVSTSRPPKS*VGWIISLLYILSTD
Trigger: GTCTGTTGACAGAATATATAACAGAGATATTATCCACCCTACTCAGGACTTCGGTGGCCTTGATGTGCTTACTATATCACTTGGAGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp TCTGGAAGTATATACCATTGGCTTCTCCCTGTCATATTCCATTTCTaGGCAAGTGAAAGATTCATGGGAGTCACTATCAGAAGAGGATTC +
Preference number: 5 (lower is better)
Translates to: SGSIYHWLLPVIFHF*ASERFMGVTIRRGF
Trigger: GAATCCTCTTCTGATAGTGACTCCCATGAATCTTTCACTTGCTCAGAAATGGAATATGACAGGGAGAAGCCAATGGTATATACTTCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp ATTCACATCAATCACATTTACGGTCACACTGCAGTAACCAGTTCTTaGAACCCATCCTCCATCTATAGCACTAATCGTCATTTCGTGTTT +
Preference number: 5 (lower is better)
Translates to: IHINHIYGHTAVTSS*NPSSIYSTNRHFVF
Trigger: AAACACGAAATGACGATTAGTGCTATAGATGGAGGATGGGTTGCAAGAACTGGTTACTGCAGTGTGACCGTAAATGTGATTGATGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp ACAGACAATACTGTTGCTGTTCCATTTTTCCCAATTAGAAAAGTGTaGCAGTGGCCGTCTGCAACATATACTTCAGGAATATTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: TDNTVAVPFFPIRKV*QWPSATYTSGIFLS
Trigger: GGAGAGAAATATTCCTGAAGTATATGTTGCAGACGGCCACTGGCACACTTTTCTAATTGGGAAAAATGGAACAGCAACAGTATTGTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp GTTCTCCTCTACCGTGAGATCCAGCATGTCCGTTGGAAATACTGGTaGATTGTCATTGATATCCTGAAGTGTTATTTCTACAATAAACAC +
Preference number: 5 (lower is better)
Translates to: VLLYREIQHVRWKYW*IVIDILKCYFYNKH
Trigger: GTGTTTATTGTAGAAATAACACTTCAGGATATCAATGACAATCCACCAGTATTTCCAACGGACATGCTGGATCTCACGGTAGAGGAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335110.5
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGTCCCAATACTGAACTaGTTTCCCAAAGGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSVPILN*FPKGFS
Trigger: GCTGAACCCTTTGGGAAACAAGTTCAGTATTGGGAC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAGCGAACCTGTCCATTaGTGCCTTCATCTCCATCTG +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSEPVH*CLHLHL
Trigger: CAGATGGAGATGAAGGCACAAATGGACAGGTTCGCT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCCACCACCTGAAGAATaGTTCTGGGTAGTGTCCCTA +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISPPPEE*FWVVSL
Trigger: TAGGGACACTACCCAGAACAATTCTTCAGGTGGTGG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCACCACCTGAAGAATaGTTCTGGGTAGTGTCCCTA +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPPPEE*FWVVSL
Trigger: TAGGGACACTACCCAGAACAATTCTTCAGGTGGTGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGACAAAGCGCTCTTTaGTTTCCCGATCCAGACTCT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSRQSAL*FPDPDS
Trigger: AGAGTCTGGATCGGGAAACAAAAGAGCGCTTTGTCT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGTGGGGACATTGTCATaGACATCATCTACTATGACG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFVGTLS*TSSTMT
Trigger: CGTCATAGTAGATGATGTCAATGACAATGTCCCCAC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAACATCTGTTCCAGTaGGTGCATCCTCAGGAATTG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKHLFQ*VHPQEL
Trigger: CAATTCCTGAGGATGCACCAACTGGAACAGATGTTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGCGCTGGTGATGATTaGTCCTGTCGATGGGTTGAT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCAGDD*SCRWVD
Trigger: ATCAACCCATCGACAGGACAAATCATCACCAGCGCA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTTCAAAATCCAGAGGTaGACTAATAGACACCTGCCC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFFKIQR*TNRHLP
Trigger: GGGCAGGTGTCTATTAGTCAACCTCTGGATTTTGAA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCAGTTATGTGAACAGTaGCTTGGGAAGAAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFQLCEQ*LGKKVE
Trigger: CTCCACTTTCTTCCCAAGCAACTGTTCACATAACTG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGCACTCATGTGGCTTaGAGAGAATTCAGGTGTATG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFCTHVA*REFRCM
Trigger: CATACACCTGAATTCTCTCAAAGCCACATGAGTGCA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTCCTCATCGGGGACATaGAAGGCTTTCACAGTAAGA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSSSGT*KAFTVR
Trigger: TCTTACTGTGAAAGCCTTCAATGTCCCCGATGAGGA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATGCTGCCAAAGTTCTaGGCCAATACCTTCAAAGAC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFMLPKF*ANTFKD
Trigger: GTCTTTGAAGGTATTGGCCAAGAACTTTGGCAGCAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCCTGTGGAAGACATTaGAGGAACACCAGAATCCTT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSCGRH*RNTRIL
Trigger: AAGGATTCTGGTGTTCCTCAAATGTCTTCCACAGGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGAAGTCCTTTACTGTaGGTACGCCGAGACGAAGTA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSRSPLL*VRRDEV
Trigger: TACTTCGTCTCGGCGTACCAACAGTAAAGGACTTCT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCGGAGAAGGATCTCTTaGATGCTTTCAAAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRRRIS*MLSKKV
Trigger: CACCTTCTTTGAAAGCATCAAAGAGATCCTTCTCCG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCCAGAGGCCTTCCATaGACTGCAAACTCCATTATA +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSRGLP*TANSII
Trigger: TATAATGGAGTTTGCAGTCAATGGAAGGCCTCTGGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCTGGATTGAAAATTTaGGTGTGTGGCTGCGGAACT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSGLKI*VCGCGT
Trigger: AGTTCCGCAGCCACACACCAAAATTTTCAATCCAGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGACTGTGCCTCTGGATaGAAAATTTTGGTGTGTGGC +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSDCASG*KILVCG
Trigger: GCCACACACCAAAATTTTCAATCCAGAGGCACAGTC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGAAGATGCAATTCCCTaGCTGGGCTGTTTCTATAGA +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFEDAIP*LGCFYR
Trigger: TCTATAGAAACAGCCCAGCAAGGGAATTGCATCTTC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCCCAGTTCAAAAGGTaGTCCCAGTTGAAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPQFKR*SQLKVP
Trigger: AGGGACTTTCAACTGGGACAACCTTTTGAACTGGGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCCCCAGTTCAAAAGGTaGTCCCAGTTGAAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISPQFKR*SQLKVP
Trigger: AGGGACTTTCAACTGGGACAACCTTTTGAACTGGGG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTCAGGTTCGGCACTTaGCTGCTTTGCACTTCAAAG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILRFGT*LLCTSK
Trigger: CTTTGAAGTGCAAAGCAGCAAAGTGCCGAACCTGAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAATGTGAGCAAAGTATaGGACCGGGTAGAAGACAGG +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSNVSKV*DRVEDR
Trigger: CCTGTCTTCTACCCGGTCCAATACTTTGCTCACATT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGGGAATAGGCAGGTGTaGCTTCATAGTCTAATTTGC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFGNRQV*LHSLIC
Trigger: GCAAATTAGACTATGAAGCAACACCTGCCTATTCCC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGAATCCACACCACTTaGGCAGGAACCACCATTAAA +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRIHTT*AGTTIK
Trigger: TTTAATGGTGGTTCCTGCCAAAGTGGTGTGGATTCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS TCA 90 bp CTTATCAGAAGCTTGTACTTTAAAGAATCGAGAATTCACAGGTTCTaGCTCAGAAAGGGTGACTTCATAAGAGAGTTGGTCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: LIRSLYFKESRIHRF*LRKGDFIRELVKHW
Trigger: CCAGTGTTTGACCAACTCTCTTATGAAGTCACCCTTTCTGAGTCAGAACCTGTGAATTCTCGATTCTTTAAAGTACAAGCTTCTGATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS TCA 90 bp GTCACGTTCTTCAAAGCATACCGTCTAGTTTCTATTGGCACAGCTTaGTCATTGGCTTTTACAGTCAACTCAAAGAGATTAGCAAATTCC +
Preference number: 5 (lower is better)
Translates to: VTFFKAYRLVSIGTA*SLAFTVNSKRLANS
Trigger: GGAATTTGCTAATCTCTTTGAGTTGACTGTAAAAGCCAATGATCAAGCTGTGCCAATAGAAACTAGACGGTATGCTTTGAAGAACGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CCA 90 bp AATACTGTTGCTGTTCCATTTTTCCCAATTAGAAAAGTGTGCCAGTaGCCGTCTGCAACATATACTTCAGGAATATTTCTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: NTVAVPFFPIRKVCQ*PSATYTSGIFLSTF
Trigger: GAAAGTGGAGAGAAATATTCCTGAAGTATATGTTGCAGACGGCCACTGGCACACTTTTCTAATTGGGAAAAATGGAACAGCAACAGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp AAAATCTGGCTGCACCATTTCAAAAGAATACCTTACTTCTCCATTTaGCCCAAAGTCTTTATCTACAGCACTTACTTTGCCCACAAACGA +
Preference number: 5 (lower is better)
Translates to: KIWLHHFKRIPYFSI*PKVFIYSTYFAHKR
Trigger: TCGTTTGTGGGCAAAGTAAGTGCTGTAGATAAAGACTTTGGGCCAAATGGAGAAGTAAGGTATTCTTTTGAAATGGTGCAGCCAGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGATCCAGCATGTCCGTaGGAAATACTGGTGGATTGT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIDPACP*EILVDC
Trigger: ACAATCCACCAGTATTTCCAACGGACATGCTGGATC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGATCCAGCATGTCCGTaGGAAATACTGGTGGATTGT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISDPACP*EILVDC
Trigger: ACAATCCACCAGTATTTCCAACGGACATGCTGGATC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTCTGATGGTAGTAAATaGTCCCCCACCATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISDGSK*SPTIFC
Trigger: GCAGAAGATGGTGGGGGACAATTTACTACCATCAGA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTGGCAGGTCATGCACTaGAACAACCAAGTTGTAGAA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSWQVMH*NNQVVE
Trigger: TTCTACAACTTGGTTGTTCAAGTGCATGACCTGCCA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATCTGGGTCAGTTGCTaGAGCTTTGAAAACAACAGT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFIWVSC*SFENNS
Trigger: ACTGTTGTTTTCAAAGCTCAAGCAACTGACCCAGAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTACTCAATATAGCTGTTaGGGCCACTATCTGGGTCAG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSITQYSC*GHYLGQ
Trigger: CTGACCCAGATAGTGGCCCAAACAGCTATATTGAGT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTGCTGCCTCGATCTGTaGCCTGAACAGTTAAATGGT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSICCLDL*PEQLNG
Trigger: ACCATTTAACTGTTCAGGCAACAGATCGAGGCAGCA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGCTGCCTCGATCTGTaGCCTGAACAGTTAAATGGT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCCLDL*PEQLNG
Trigger: ACCATTTAACTGTTCAGGCAACAGATCGAGGCAGCA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTCGATCATCATCTCTaGCCACCACCTGAAGAATTG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILDHHL*PPPEEL
Trigger: CAATTCTTCAGGTGGTGGCAAGAGATGATGATCGAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTCATCTACTATGACGTaGATTGTTCCAGTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFSSTMT*IVPVPV
Trigger: GACTGGAACTGGAACAATCAACGTCATAGTAGATGA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTCAATCTGGAAAGTATaGCCAAGATTCCCACTTGCG +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSIWKV*PRFPLA
Trigger: CGCAAGTGGGAATCTTGGCAATACTTTCCAGATTGA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAAAATCCAAGAAGCCTaGAGTGGTTATGACTCCTGT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFKIQEA*SGYDSC
Trigger: ACAGGAGTCATAACCACTCAAGGCTTCTTGGATTTT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCCTCATCGGGGACATaGAAGGCTTTCACAGTAAGA +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSSSGT*KAFTVR
Trigger: TCTTACTGTGAAAGCCTTCAATGTCCCCGATGAGGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAAAGTGCCTGGCCGTTaGTTTTCCATGACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIKVPGR*FSMTSP
Trigger: AGGAGAAGTCATGGAAAACAAACGGCCAGGCACTTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATAAGTAAAGGGACCTaGATTTGGAGGGAGATCAGG +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSISKGT*IWREIR
Trigger: CCTGATCTCCCTCCAAATCAAGGTCCCTTTACTTAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTATCCTGGCAGACACTaGCATAAGAAAGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIYPGRH*HKKGCR
Trigger: TCTGCAGCCTTTCTTATGCAAGTGTCTGCCAGGATA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCCTGTGTATCCAGTTTaGCAAACACAGTTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFPVYPV*QTQLKL
Trigger: AAGCTTCAACTGTGTTTGCAAAACTGGATACACAGG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATCAAAACCTGCTGTTaGGGCATCTCGATGTGCTTG +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISIKTCC*GISMCL
Trigger: CAAGCACATCGAGATGCCCAAACAGCAGGTTTTGAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGAACTGCTTGTAGTGTaGAATGATGTCTGCATCCGA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSELLVV*NDVCIR
Trigger: TCGGATGCAGACATCATTCAACACTACAAGCAGTTC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGACTGTGCCTCTGGATaGAAAATTTTGGTGTGTGGC +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISDCASG*KILVCG
Trigger: GCCACACACCAAAATTTTCAATCCAGAGGCACAGTC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTAGTTGTCCCAGCTTaGCCTTCTTCATTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLVVPA*PSSFAA
Trigger: AGCAGCAAATGAAGAAGGCAAAGCTGGGACAACTAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCTGCCGACCCATTATTaGTACATCCAAATCGAACGC +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLPTHY*YIQIER
Trigger: GCGTTCGATTTGGATGTACAAATAATGGGTCGGCAG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTGCTACTGTCTTCCTaGAAAGTGACCACGATAGAG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILLLSS*KVTTIE
Trigger: CTCTATCGTGGTCACTTTCAAGGAAGACAGTAGCAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGCAGATATGCTATATTaGACAGTACCATTGGTACCC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFADMLY*TVPLVP
Trigger: GGGTACCAATGGTACTGTCAAATATAGCATATCTGC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGTTACTATTGCCTGGTaGGGAGATTGTAAATTGCCA +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFVTIAW*GDCKLP
Trigger: TGGCAATTTACAATCTCCCAACCAGGCAATAGTAAC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTACAGGTGGGTTGTCTaGAGTGTCCAATACAGTGAT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSYRWVV*SVQYSD
Trigger: ATCACTGTATTGGACACTCAAGACAACCCACCTGTA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAGGTTCTTGGGGTTTaGCTTCAGACTATAGAGTAC +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQVLGV*LQTIEY
Trigger: GTACTCTATAGTCTGAAGCAAAACCCCAAGAACCTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTGCCAAGATCTCTATTaGGTAGGAGCCAGCATGAAC +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSICQDLY*VGASMN
Trigger: GTTCATGCTGGCTCCTACCAAATAGAGATCTTGGCA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGAAAGCTAGGAGGATaGTCATTAAAGTCCCTCACG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGKLGG*SLKSLT
Trigger: CGTGAGGGACTTTAATGACAATCCTCCTAGCTTTCC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTCTATTGATATCACGTTaGTGCCAATGGGTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFLLISR*CQWVLL
Trigger: AAGGAGAACCCATTGGCACAAACGTGATATCAATAG...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 90 bp AGTAAGAAACACTGTAGCTCGCATATTGAATACTGGAATGATAGTTaGGGATGGGAAGGTAGTACAAAGGCCAACACATTATCCACAATA +
Preference number: 5 (lower is better)
Translates to: SKKHCSSHIEYWNDS*GWEGSTKANTLSTI
Trigger: TATTGTGGATAATGTGTTGGCCTTTGTACTACCTTCCCATCCTCAACTATCATTCCAGTATTCAATATGCGAGCTACAGTGTTTCTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678072.1
CDS CCA 90 bp AATGTTCTCCTCTACCGTGAGATCCAGCATGTCCGTTGGAAATACTaGTGGATTGTCATTGATATCCTGAAGTGTTATTTCTACAATAAA +
Preference number: 5 (lower is better)
Translates to: NVLLYREIQHVRWKY*WIVIDILKCYFYNK
Trigger: TTTATTGTAGAAATAACACTTCAGGATATCAATGACAATCCACCAGTATTTCCAACGGACATGCTGGATCTCACGGTAGAGGAGAACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335110.5
CDS CCA 90 bp GGCATTTTCCAAAACAGTAGGGAAATAGTCATCAGAGAGGAATACTaGAGAATTATCATTCACATCAATCACATTTACGGTCACACTGCA +
Preference number: 5 (lower is better)
Translates to: GIFQNSREIVIREEY*RIIIHINHIYGHTA
Trigger: TGCAGTGTGACCGTAAATGTGATTGATGTGAATGATAATTCTCCAGTATTCCTCTCTGATGACTATTTCCCTACTGTTTTGGAAAATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp AACCAAAATGGTCACGTTCTTCAAAGCATACCGTCTAGTTTCTATTaGCACAGCTTGATCATTGGCTTTTACAGTCAACTCAAAGAGATT +
Preference number: 5 (lower is better)
Translates to: NQNGHVLQSIPSSFY*HSLIIGFYSQLKEI
Trigger: AATCTCTTTGAGTTGACTGTAAAAGCCAATGATCAAGCTGTGCCAATAGAAACTAGACGGTATGCTTTGAAGAACGTGACCATTTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTACGGGTCTGGAAAATTaGGGTGTATGGTCATTCACA +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISTGLEN*GVWSFT
Trigger: TGTGAATGACCATACACCCAAATTTTCCAGACCCGT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGGCAGGTCATGCACTaGAACAACCAAGTTGTAGAA +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISWQVMH*NNQVVE
Trigger: TTCTACAACTTGGTTGTTCAAGTGCATGACCTGCCA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATCTGCTGCGAACACTaGTATTATATCTGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFICCEH*YYICSS
Trigger: ACTGGAACAGATATAATACAAGTGTTCGCAGCAGAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAGAACATATGAGAGTTaGCTGTTAGATCCTCGATCA +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFRTYES*LLDPRS
Trigger: TGATCGAGGATCTAACAGCAAACTCTCATATGTTCT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTGAGAGAGTAAAAGCATaGTCTTCATTACCACCAAAC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFERVKA*SSLPPN
Trigger: GTTTGGTGGTAATGAAGACAATGCTTTTACTCTCTC...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTCATCTACTATGACGTaGATTGTTCCAGTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSSSTMT*IVPVPV
Trigger: GACTGGAACTGGAACAATCAACGTCATAGTAGATGA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGTGGGGACATTGTCATaGACATCATCTACTATGACG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIVGTLS*TSSTMT
Trigger: CGTCATAGTAGATGATGTCAATGACAATGTCCCCAC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAAACATCTGTTCCAGTaGGTGCATCCTCAGGAATTG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIKHLFQ*VHPQEL
Trigger: CAATTCCTGAGGATGCACCAACTGGAACAGATGTTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTCAAAATCCAGAGGTaGACTAATAGACACCTGCCC +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISFKIQR*TNRHLP
Trigger: GGGCAGGTGTCTATTAGTCAACCTCTGGATTTTGAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAAAACACTTGTCCATTaGATCCCTCATCAGGATCTG +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSKTLVH*IPHQDL
Trigger: CAGATCCTGATGAGGGATCAAATGGACAAGTGTTTT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCAGTTATGTGAACAGTaGCTTGGGAAGAAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIQLCEQ*LGKKVE
Trigger: CTCCACTTTCTTCCCAAGCAACTGTTCACATAACTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTGCACTCATGTGGCTTaGAGAGAATTCAGGTGTATG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSICTHVA*REFRCM
Trigger: CATACACCTGAATTCTCTCAAAGCCACATGAGTGCA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATGCTGCCAAAGTTCTaGGCCAATACCTTCAAAGAC +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISMLPKF*ANTFKD
Trigger: GTCTTTGAAGGTATTGGCCAAGAACTTTGGCAGCAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATAAGTAAAGGGACCTaGATTTGGAGGGAGATCAGG +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISISKGT*IWREIR
Trigger: CCTGATCTCCCTCCAAATCAAGGTCCCTTTACTTAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTCCTGTGGAAGACATTaGAGGAACACCAGAATCCTT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISCGRH*RNTRIL
Trigger: AAGGATTCTGGTGTTCCTCAAATGTCTTCCACAGGA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCGGAGAAGGATCTCTTaGATGCTTTCAAAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRRRIS*MLSKKV
Trigger: CACCTTCTTTGAAAGCATCAAAGAGATCCTTCTCCG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCCTGTGTATCCAGTTTaGCAAACACAGTTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSPVYPV*QTQLKL
Trigger: AAGCTTCAACTGTGTTTGCAAAACTGGATACACAGG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTCCAGAGGCCTTCCATaGACTGCAAACTCCATTATA +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISRGLP*TANSII
Trigger: TATAATGGAGTTTGCAGTCAATGGAAGGCCTCTGGA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGGTTTCTTCTCCTCTTaGGGATTTTTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIGFFSS*GFLAFF
Trigger: GAAGAAGGCCAAAAATCCCAAAGAGGAGAAGAAACC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGAACTGCTTGTAGTGTaGAATGATGTCTGCATCCGA +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISELLVV*NDVCIR
Trigger: TCGGATGCAGACATCATTCAACACTACAAGCAGTTC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTCTGGATTGAAAATTTaGGTGTGTGGCTGCGGAACT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSISGLKI*VCGCGT
Trigger: AGTTCCGCAGCCACACACCAAAATTTTCAATCCAGA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTTGGAAGTATATACCATaGGCTTCTCCCTGTCATATT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFWKYIP*ASPCHI
Trigger: AATATGACAGGGAGAAGCCAATGGTATATACTTCCA...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCTTTGCCTTCTTCATTaGCTGCTGCTTTTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLCLLH*LLLFLE
Trigger: TTCCAGAAAAAGCAGCAGCAAATGAAGAAGGCAAAG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTTTAGTTGTCCCAGCTTaGCCTTCTTCATTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILVVPA*PSSFAA
Trigger: AGCAGCAAATGAAGAAGGCAAAGCTGGGACAACTAA...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCATTTACACTCTCTATaGCCTGAAGGAAATGGGGAG +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISHLHSL*PEGNGE
Trigger: CTCCCCATTTCCTTCAGGCAATAGAGAGTGTAAATG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATAGCAAACAGGTTCTaGGGGTTTTGCTTCAGACTA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSIANRF*GFCFRL
Trigger: TAGTCTGAAGCAAAACCCCAAGAACCTGTTTGCTAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATGCAATTTCACCATTaGCTCCTGAATCCTTATCAG +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFMQFHH*LLNPYQ
Trigger: CTGATAAGGATTCAGGAGCAAATGGTGAAATTGCAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAAAGTACACGTTGAATaGAGGGGGATTGTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIKVHVE*RGIVPE
Trigger: TTCAGGGACAATCCCCCTCAATTCAACGTGTACTTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCTAAAAGTTCCGTGGTaGTTAGTCCCAGTAATACTG +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLKVPW*LVPVIL
Trigger: CAGTATTACTGGGACTAACAACCACGGAACTTTTAG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCACGAGGAGGTCTTCCTaGGTCTTTTGCTGTTATATT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSTRRSS*VFCCYI
Trigger: AATATAACAGCAAAAGACCAAGGAAGACCTCCTCGT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAGAATCCACACCACTTaGGCAGGAACCACCATTAAA +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRIHTT*AGTTIK
Trigger: TTTAATGGTGGTTCCTGCCAAAGTGGTGTGGATTCT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTAATGCTATAAGTCAATaGAGAGTTGATGCCATCATC +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFNAISQ*RVDAII
Trigger: GATGATGGCATCAACTCTCAATTGACTTATAGCATT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATCTGGGTCAGTTGCTaGAGCTTTGAAAACAACAGT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIIWVSC*SFENNS
Trigger: ACTGTTGTTTTCAAAGCTCAAGCAACTGACCCAGAT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TACGCCACTGGGAAAGCACAAGTTCTTTTCTGCAATGGTAAAGGTATCAATTTTATGGGGTTGTTATCATaGATGTCAAGTACCATAACT +
Preference number: 5 (lower is better)
Translates to: YATGKAQVLFCNGKGINFMGLLS*MSSTIT
Trigger: AGTTATGGTACTTGACATCAATGATAACAACCCCAT...AAAATTGATACCTTTACCATTGCAGAAAAGAACTTGTGCTTTCCCAGTGGCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATCTGCTGCGAACACTaGTATTATATCTGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSICCEH*YYICSS
Trigger: ACTGGAACAGATATAATACAAGTGTTCGCAGCAGAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGAACATATGAGAGTTaGCTGTTAGATCCTCGATCA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSRTYES*LLDPRS
Trigger: TGATCGAGGATCTAACAGCAAACTCTCATATGTTCT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAATGCAGTTCAGAATTaGGTCCAATATCAGCATCTG +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSNAVQN*VQYQHL
Trigger: CAGATGCTGATATTGGACCAAATTCTGAACTGCATT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCAGGAAACATGAACGTTaGTTCTTTGGCTCTCACTTT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSRKHER*FFGSHF
Trigger: AAAGTGAGAGCCAAAGAACAAACGTTCATGTTTCCT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAAGAGAGCTGACTGGTaGGTTTTCAGGAAACATGAA +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIKRADW*VFRKHE
Trigger: TTCATGTTTCCTGAAAACCAACCAGTCAGCTCTCTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAAGAGAGCTGACTGGTaGGTTTTCAGGAAACATGAA +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISKRADW*VFRKHE
Trigger: TTCATGTTTCCTGAAAACCAACCAGTCAGCTCTCTT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCTAAATCTTGGAGCATaGTCATTGATGTCTGTCACA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLNLGA*SLMSVT
Trigger: TGTGACAGACATCAATGACAATGCTCCAAGATTTAG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCCTCATCAGGATCTGTaGCAAATACCTGAGTTACTT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIPHQDL*QIPELL
Trigger: AAGTAACTCAGGTATTTGCAACAGATCCTGATGAGG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCCTCATCAGGATCTGTaGCAAATACCTGAGTTACTT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISPHQDL*QIPELL
Trigger: AAGTAACTCAGGTATTTGCAACAGATCCTGATGAGG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAAAACACTTGTCCATTaGATCCCTCATCAGGATCTG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIKTLVH*IPHQDL
Trigger: CAGATCCTGATGAGGGATCAAATGGACAAGTGTTTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATCCACCCCGTATCATaGTCCAACTTAAATTTTCCT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSIHPVS*SNLNFP
Trigger: AGGAAAATTTAAGTTGGACAATGATACGGGGTGGAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAAAATCCAAGAAGCCTaGAGTGGTTATGACTCCTGT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIKIQEA*SGYDSC
Trigger: ACAGGAGTCATAACCACTCAAGGCTTCTTGGATTTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTTTGCCTTCTTCATTaGCTGCTGCTTTTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILCLLH*LLLFLE
Trigger: TTCCAGAAAAAGCAGCAGCAAATGAAGAAGGCAAAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTGGGAGATTGTAAATaGCCACCATCAGTAGCTACT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLGDCK*PPSVAT
Trigger: AGTAGCTACTGATGGTGGCAATTTACAATCTCCCAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCCAGCTGATAAAAGGATaGCTCTTCTCTATCAATCAC +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSQLIKG*LFSINH
Trigger: GTGATTGATAGAGAAGAGCAATCCTTTTATCAGCTG...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATTGGGACATTGTCATaGAGGTCTGTAACCAAAATG +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSIGTLS*RSVTKM
Trigger: CATTTTGGTTACAGACCTCAATGACAATGTCCCAAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTGTGTCTGTGTCCCCATaGATGATCTCATACTCTATT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISVSVSP*MISYSI
Trigger: AATAGAGTATGAGATCATCAATGGGGACACAGACAC...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCGGAGACTATAATCATTaGCTCAAGGATCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSGDYNH*LKDPEV
Trigger: AACTTCTGGATCCTTGAGCAAATGATTATAGTCTCC...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAAAATAATGGAGACTaGAGCAGTGCTTGTGAATCT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQNNGD*SSACES
Trigger: AGATTCACAAGCACTGCTCAAGTCTCCATTATTTTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCAAAATAATGGAGACTaGAGCAGTGCTTGTGAATCT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIQNNGD*SSACES
Trigger: AGATTCACAAGCACTGCTCAAGTCTCCATTATTTTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCATGGGGTTGTTATCATaGATGTCAAGTACCATAACT +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSMGLLS*MSSTIT
Trigger: AGTTATGGTACTTGACATCAATGATAACAACCCCAT...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCACTTTATACAAAGCTaGTGCAAAGATGGGGTTGTT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIHFIQS*CKDGVV
Trigger: AACAACCCCATCTTTGCACAAGCTTTGTATAAAGTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGAGAGAGTAAAAGCATaGTCTTCATTACCACCAAAC +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIERVKA*SSLPPN
Trigger: GTTTGGTGGTAATGAAGACAATGCTTTTACTCTCTC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATGAACGTTTGTTCTTaGGCTCTCACTTTAGGGAAA +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISMNVCS*ALTLGK
Trigger: TTTCCCTAAAGTGAGAGCCAAAGAACAAACGTTCAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATGAACGTTTGTTCTTaGGCTCTCACTTTAGGGAAA +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIMNVCS*ALTLGK
Trigger: TTTCCCTAAAGTGAGAGCCAAAGAACAAACGTTCAT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGGAAACATGAACGTTaGTTCTTTGGCTCTCACTTT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRKHER*FFGSHF
Trigger: AAAGTGAGAGCCAAAGAACAAACGTTCATGTTTCCT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCTAAATCTTGGAGCATaGTCATTGATGTCTGTCACA +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSILNLGA*SLMSVT
Trigger: TGTGACAGACATCAATGACAATGCTCCAAGATTTAG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TTTCAGTACCCACTGTCATGTAAAACTTACTCAAATACTGAGACATTTCTGAGCTTACTGTCCACTATATaGATGGTAACTGTTGTCTCA +
Preference number: 5 (lower is better)
Translates to: FQYPLSCKTYSNTETFLSLLSTI*MVTVVS
Trigger: TGAGACAACAGTTACCATCAATATAGTGGACAGTAA...GCTCAGAAATGTCTCAGTATTTGAGTAAGTTTTACATGACAGTGGGTACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATCCACCCCGTATCATaGTCCAACTTAAATTTTCCT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISIHPVS*SNLNFP
Trigger: AGGAAAATTTAAGTTGGACAATGATACGGGGTGGAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGTCCAGTCTTCTTATaGATCTGGAAACCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISCPVFL*IWKPFF
Trigger: AAAGAAGGGTTTCCAGATCAATAAGAAGACTGGACA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCGAGACTGTGAAGGATaGTCATTTTGGTCTATAACT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISRDCEG*SFWSIT
Trigger: AGTTATAGACCAAAATGACAATCCTTCACAGTCTCG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTCAACAGACAATACTGTaGCTGTTCCATTTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIQQTIL*LFHFSQ
Trigger: TTGGGAAAAATGGAACAGCAACAGTATTGTCTGTTG...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCAACAGACAATACTGTaGCTGTTCCATTTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISQQTIL*LFHFSQ
Trigger: TTGGGAAAAATGGAACAGCAACAGTATTGTCTGTTG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTGGAAGTATATACCATaGGCTTCTCCCTGTCATATT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISWKYIP*ASPCHI
Trigger: AATATGACAGGGAGAAGCCAATGGTATATACTTCCA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAGGAAATGGGGAGAGTaGTCATTCAAATCCTTAACT +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIRKWGE*SFKSLT
Trigger: AGTTAAGGATTTGAATGACAACTCTCCCCATTTCCT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTGTGCCATTCTTTTCATaGATAGCAAACAGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIVPFFS*IANRFL
Trigger: CAAGAACCTGTTTGCTATCAATGAAAAGAATGGCAC...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTCTATTGGCACAGCTaGATCATTGGCTTTTACAGT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISFYWHS*IIGFYS
Trigger: ACTGTAAAAGCCAATGATCAAGCTGTGCCAATAGAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTATAAACATTGGGACATaGTCATTGAGGTCTGTAACC +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISINIGT*SLRSVT
Trigger: GGTTACAGACCTCAATGACAATGTCCCAATGTTTAT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 90 bp AATTGTAAATGGAAGACTTGCATCCATTATAGAATATCTACTAATTaGATTGATCCCAATGTCTTCATCAGAAGTTGTGACACGGGTAAC +
Preference number: 5 (lower is better)
Translates to: NCKWKTCIHYRISTN*IDPNVFIRSCDTGN
Trigger: GTTACCCGTGTCACAACTTCTGATGAAGACATTGGGATCAATGCAATTAGTAGATATTCTATAATGGATGCAAGTCTTCCATTTACAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp TATGACAATATCCCCTGTGCTGGGATTAATTGTAAATGGAAGACTTaGATCCATTATAGAATATCTACTAATTGCATTGATCCCAATGTC +
Preference number: 5 (lower is better)
Translates to: YDNIPCAGINCKWKT*IHYRISTNCIDPNV
Trigger: GACATTGGGATCAATGCAATTAGTAGATATTCTATAATGGATGCAAGTCTTCCATTTACAATTAATCCCAGCACAGGGGATATTGTCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 90 bp AACATATACTTCAGGAATATTTCTCTCCACTTTCCCAGCAATTCCTaGATCGGATGTAAAATATACTTTGCCATTCTTAATCTTCACAGT +
Preference number: 5 (lower is better)
Translates to: NIYFRNISLHFPSNS*IGCKIYFAILNLHS
Trigger: ACTGTGAAGATTAAGAATGGCAAAGTATATTTTACATCCGATGCAGGAATTGCTGGGAAAGTGGAGAGAAATATTCCTGAAGTATATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 90 bp AGGTCTGCTTATGACAATATCCCCTGTGCTGGGATTAATTGTAAATaGAAGACTTGCATCCATTATAGAATATCTACTAATTGCATTGAT +
Preference number: 5 (lower is better)
Translates to: RSAYDNIPCAGINCK*KTCIHYRISTNCID
Trigger: ATCAATGCAATTAGTAGATATTCTATAATGGATGCAAGTCTTCCATTTACAATTAATCCCAGCACAGGGGATATTGTCATAAGCAGACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAATGCTATAAGTCAATaGAGAGTTGATGCCATCATC +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISNAISQ*RVDAII
Trigger: GATGATGGCATCAACTCTCAATTGACTTATAGCATT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTAAAGCTTTTAGGACTTaGAGTACACCATTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISKAFRT*STPFLS
Trigger: TGACAAGAATGGTGTACTCAAAGTCCTAAAAGCTTT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TGTTTTTCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTAAAGCTTTTAGGACTTaGAGTACACCATTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: CFSNVTQPSQQLYNGLSIKAFRT*STPFLS
Trigger: TGACAAGAATGGTGTACTCAAAGTCCTAAAAGCTTT...AATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGAAAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTTACTGTCCACTATATaGATGGTAACTGTTGTCTCA +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISLLSTI*MVTVVS
Trigger: TGAGACAACAGTTACCATCAATATAGTGGACAGTAA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTCCAACCTTAACATTTTaGGTGACTGGAGTGAAATAT +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISPTLTF*VTGVKY
Trigger: ATATTTCACTCCAGTCACCAAAAATGTTAAGGTTGG...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTACAGGAGGATGGTCATaGATGTCATTAACAAAAATC +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISTGGWS*MSLTKI
Trigger: GATTTTTGTTAATGACATCAATGACCATCCTCCTGT...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS-3UTR CAA 90 bp TCAAATGTGACCCAACCTAGTCAGCAACTTTACAATGGTTTGAGTATTATTTCTTCAAAGTCCAGTTTTTaGGCAAGAAAAATACTCCCA +
Preference number: 5 (lower is better)
Translates to: SNVTQPSQQLYNGLSIISSKSSF*ARKILP
Trigger: TGGGAGTATTTTTCTTGCCAAAAAACTGGACTTTGA...AGAAATAATACTCAAACCATTGTAAAGTTGCTGACTAGGTTGGGTCACATTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp ACGGCGCCTGTCAGCGCTCTCCCTCTCGCCGGCCGGGGCCGAAGGTaGGACTGCGGTGGAGCTAGGGCTCCGCGAGCCCTTCTCCACCTC +
Preference number: 6 (lower is better)
Translates to: TAPVSALPLAGRGRR*DCGGARAPRALLHL
Trigger: GAGGTGGAGAAGGGCTCGCGGAGCCCTAGCTCCACCGCAGTCCAACCTTCGGCCCCGGCCGGCGAGAGGGAGAGCGCTGACAGGCGCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp GCCGCCGCCGCCGCCCCTGTTGCGGCTTCAAGCCCGTaGTCCGGCACAAACAACAGCCAGGGCTCCTCGGCA +
Preference number: 6 (lower is better)
Translates to: AAAAAPVAASSP*SGTNNSQGSSA
Trigger: TGCCGAGGAGCCCTGGCTGTTGTTTGTGCCGGACCACGGGCTTGAAGCCGCAACAGGGGCGGCGGCGGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp GTCAGCGCTCTCCCTCTCGCCGGCCGGGGCCGAAGGTaGGACTGCGGTGGAGCTAGGGCTCCGCGAGCCCTT +
Preference number: 6 (lower is better)
Translates to: VSALPLAGRGRR*DCGGARAPRAL
Trigger: AAGGGCTCGCGGAGCCCTAGCTCCACCGCAGTCCAACCTTCGGCCCCGGCCGGCGAGAGGGAGAGCGCTGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp CAGGCGGCGGCGTCTGCGCGCAGGCAGTTCGGGAACTaGGTTCCAAGCGCTAGCGTTCGCGCTCTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: QAAASARRQFGN*VPSASVRALAP
Trigger: GGGAGCCAGAGCGCGAACGCTAGCGCTTGGAACGCAGTTCCCGAACTGCCTGCGCGCAGACGCCGCCGCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp CTTCACAGTTGGCAGCGGAGGCGGCGAAGTCGGCGCTaGGCTGTAGTGACGCCCTCCGCAGCTCCGGACGGC +
Preference number: 6 (lower is better)
Translates to: LHSWQRRRRSRR*AVVTPSAAPDG
Trigger: GCCGTCCGGAGCTGCGGAGGGCGTCACTACAGCCCAGCGCCGACTTCGCCGCCTCCGCTGCCAACTGTGAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp CGTCCAGCAGCTGAATCAGCGCCTCGGCGCGCCCAGTaGGGGAAGGCACGCCTCTGTCCATCGCCTGCACCG +
Preference number: 6 (lower is better)
Translates to: RPAAESAPRRAQ*GKARLCPSPAP
Trigger: CGGTGCAGGCGATGGACAGAGGCGTGCCTTCCCTCACTGGGCGCGCCGAGGCGCTGATTCAGCTGCTGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp CTGGATGGTGCCTACCAGAGTGCCTGGAGGTTGCTCTTCCAGCACTaGGAACACCTGGCGCGGCTCGGCCCCGTGGACCCAGGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: LDGAYQSAWRLLFQH*EHLARLGPVDPGLP
Trigger: GGGCAGGCCTGGGTCCACGGGGCCGAGCCGCGCCAGGTGTTCCAAGTGCTGGAAGAGCAACCTCCAGGCACTCTGGTAGGCACCATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp GAAGCCGGGGCGCGTCTGGATGGTGCCTACCAGAGTGCCTGGAGGTaGCTCTTCCAGCACTTGGAACACCTGGCGCGGCTCGGCCCCGTG +
Preference number: 6 (lower is better)
Translates to: EAGARLDGAYQSAWR*LFQHLEHLARLGPV
Trigger: CACGGGGCCGAGCCGCGCCAGGTGTTCCAAGTGCTGGAAGAGCAACCTCCAGGCACTCTGGTAGGCACCATCCAGACGCGCCCCGGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 72 bp GATGCAGGAACGCTCCCTCGCCGCTCGGGTTCAGGGTaGTGTCCAGACGGAAGCGCCCCGCCTCATTGCCGC +
Preference number: 6 (lower is better)
Translates to: DAGTLPRRSGSG*CPDGSAPPHCR
Trigger: GCGGCAATGAGGCGGGGCGCTTCCGTCTGGACATCACCCTGAACCCGAGCGGCGAGGGAGCGTTCCTGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp CTGCTGCCTGGGTGCCCACAGGTCCTCCCTCGGCCCTaGGACCGTGGTACCTTCGAGGCTTCAGTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: LLPGCPQVLPRP*DRGTFEASVWL
Trigger: GAGCCAGACTGAAGCCTCGAAGGTACCACGGTCGCAGGGCCGAGGGAGGACCTGTGGGCACCCAGGCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp CATGGGCAGTGTGTTGTCAGCAGTGCCTGGTGCTGCTaGCTGGGTGCCCACAGGTCCTCCCTCGGCCCTGCG +
Preference number: 6 (lower is better)
Translates to: HGQCVVSSAWCC*LGAHRSSLGPA
Trigger: CGCAGGGCCGAGGGAGGACCTGTGGGCACCCAGGCAGCAGCACCAGGCACTGCTGACAACACACTGCCCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp TGGGGTAGGTGGGCGCGCTGGAAAGGACCACCAGGTTaGTCACGTCGCTGGGCAGGCTCTCGCGGTCGATGG +
Preference number: 6 (lower is better)
Translates to: WGRWARWKGPPG*SRRWAGSRGRW
Trigger: CCATCGACCGCGAGAGCCTGCCCAGCGACGTGATCAACCTGGTGGTCCTTTCCAGCGCGCCCACCTACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp GTGACCTCACGGTCCAGTCCGCCCTTGGACACCAGATaGAGGAACGCTCCCTCGCCGCTCGGGTTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: VTSRSSPPLDTR*RNAPSPLGFRV
Trigger: CACCCTGAACCCGAGCGGCGAGGGAGCGTTCCTGCATCTGGTGTCCAAGGGCGGACTGGACCGTGAGGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp CACCAGGCTTGCCACAGAAGAGCGCGCCTGGACTGCTaGGCCAGGGGGCGCCCCGTAGTTATCAGAGACGGA +
Preference number: 6 (lower is better)
Translates to: HQACHRRARLDC*ARGRPVVIRDG
Trigger: TCCGTCTCTGATAACTACGGGGCGCCCCCTGGCGCAGCAGTCCAGGCGCGCTCTTCTGTGGCAAGCCTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 72 bp TCGGGAACTGCGTTCCAAGCGCTAGCGTTCGCGCTCTaGCTCCCGTACCCGGGAGCGCTCAACTCTGCCCCT +
Preference number: 6 (lower is better)
Translates to: SGTAFQALAFAL*LPYPGALNSAP
Trigger: AGGGGCAGAGTTGAGCGCTCCCGGGTACGGGAGCCAGAGCGCGAACGCTAGCGCTTGGAACGCAGTTCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp CCTACCAGAGTGCCTGGAGGTTGCTCTTCCAGCACTTaGAACACCTGGCGCGGCTCGGCCCCGTGGACCCAG +
Preference number: 6 (lower is better)
Translates to: PTRVPGGCSSST*NTWRGSAPWTQ
Trigger: CTGGGTCCACGGGGCCGAGCCGCGCCAGGTGTTCCAAGTGCTGGAAGAGCAACCTCCAGGCACTCTGGTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 72 bp GCCTACCAGAGTGCCTGGAGGTTGCTCTTCCAGCACTaGGAACACCTGGCGCGGCTCGGCCCCGTGGACCCA +
Preference number: 6 (lower is better)
Translates to: AYQSAWRLLFQH*EHLARLGPVDP
Trigger: TGGGTCCACGGGGCCGAGCCGCGCCAGGTGTTCCAAGTGCTGGAAGAGCAACCTCCAGGCACTCTGGTAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp ACCAGGAGCTGGTACTGCGGAGTGACCTCACGGTCCAGTCCGCCCTaGGACACCAGATGCAGGAACGCTCCCTCGCCGCTCGGGTTCAGG +
Preference number: 6 (lower is better)
Translates to: TRSWYCGVTSRSSPP*DTRCRNAPSPLGFR
Trigger: CCTGAACCCGAGCGGCGAGGGAGCGTTCCTGCATCTGGTGTCCAAGGGCGGACTGGACCGTGAGGTCACTCCGCAGTACCAGCTCCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 72 bp AGGTCCTTCCCGTGTGCGAGTCTGGGCAGCTACAGGTaGAGCCGGAGTGCAGGCCTGGCTCACAGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: RSFPCASLGSYR*SRSAGLAHSCH
Trigger: GTGGCAGCTGTGAGCCAGGCCTGCACTCCGGCTTCACCTGTAGCTGCCCAGACTCGCACACGGGAAGGACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp TGTCCAGACGGAAGCGCCCCGCCTCATTGCCGCGGATaGTGCGGTAGGAGCGGTGGTCCACACCGTTTGAGC +
Preference number: 6 (lower is better)
Translates to: CPDGSAPPHCRG*CGRSGGPHRLS
Trigger: GCTCAAACGGTGTGGACCACCGCTCCTACCGCATCATCCGCGGCAATGAGGCGGGGCGCTTCCGTCTGGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp AACACCTGGCGCGGCTCGGCCCCGTGGACCCAGGCCTaGCCCGGAAGCAATGACAGTAGCCAAAACACTCGA +
Preference number: 6 (lower is better)
Translates to: NTWRGSAPWTQA*PGSNDSSQNTR
Trigger: TCGAGTGTTTTGGCTACTGTCATTGCTTCCGGGGCAGGCCTGGGTCCACGGGGCCGAGCCGCGCCAGGTGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp TTGCACGGAGATGTTCCCGTTGGCCGCGGGAGAATCTaGGTCCGTCACGGTGAGCAGAGCCACCACGGTGCC +
Preference number: 6 (lower is better)
Translates to: LHGDVPVGRGRI*VRHGEQSHHGA
Trigger: GGCACCGTGGTGGCTCTGCTCACCGTGACGGACGCAGATTCTCCCGCGGCCAACGGGAACATCTCCGTGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 72 bp GCCGGGGCGCGTCTGGATGGTGCCTACCAGAGTGCCTaGAGGTTGCTCTTCCAGCACTTGGAACACCTGGCG +
Preference number: 6 (lower is better)
Translates to: AGARLDGAYQSA*RLLFQHLEHLA
Trigger: CGCCAGGTGTTCCAAGTGCTGGAAGAGCAACCTCCAGGCACTCTGGTAGGCACCATCCAGACGCGCCCCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 72 bp ACGCCTCTGTCCATCGCCTGCACCGTAAGCGAGTATTaGCGCCGAGCTTCGAAGTCCAGGGGCTCCCGCACC +
Preference number: 6 (lower is better)
Translates to: TPLSIACTVSEY*RRASKSRGSRT
Trigger: GGTGCGGGAGCCCCTGGACTTCGAAGCTCGGCGCCAATACTCGCTTACGGTGCAGGCGATGGACAGAGGCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 72 bp TGGTACTGCGGAGTGACCTCACGGTCCAGTCCGCCCTaGGACACCAGATGCAGGAACGCTCCCTCGCCGCTC +
Preference number: 6 (lower is better)
Translates to: WYCGVTSRSSPP*DTRCRNAPSPL
Trigger: GAGCGGCGAGGGAGCGTTCCTGCATCTGGTGTCCAAGGGCGGACTGGACCGTGAGGTCACTCCGCAGTACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 72 bp CACGCCTCTGTCCATCGCCTGCACCGTAAGCGAGTATaGGCGCCGAGCTTCGAAGTCCAGGGGCTCCCGCAC +
Preference number: 6 (lower is better)
Translates to: HASVHRLHRKRV*APSFEVQGLPH
Trigger: GTGCGGGAGCCCCTGGACTTCGAAGCTCGGCGCCAATACTCGCTTACGGTGCAGGCGATGGACAGAGGCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 72 bp TCCCGTTGGCCGCGGGAGAATCTGCGTCCGTCACGGTaGGCAGAGCCACCACGGTGCCCACTTGAGCATTCT +
Preference number: 6 (lower is better)
Translates to: SRWPRENLRPSR*AEPPRCPLEHS
Trigger: AGAATGCTCAAGTGGGCACCGTGGTGGCTCTGCTCACCGTGACGGACGCAGATTCTCCCGCGGCCAACGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp GTGTGCGAGTCTGGGCAGCTACAGGTGAAGCCGGAGTaGAGGCCTGGCTCACAGCTGCCACCATTCTGGCAC +
Preference number: 6 (lower is better)
Translates to: VCESGQLQVKPE*RPGSQLPPFWH
Trigger: GTGCCAGAATGGTGGCAGCTGTGAGCCAGGCCTGCACTCCGGCTTCACCTGTAGCTGCCCAGACTCGCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp CAGGATCAGGCTAAGGACCAGGAGGGCCAAGACGGTTaGGCAGCTGCCCACGATGGCAGGCACAGCCCACAA +
Preference number: 6 (lower is better)
Translates to: QDQAKDQEGQDG*AAAHDGRHSPQ
Trigger: TTGTGGGCTGTGCCTGCCATCGTGGGCAGCTGCGCAACCGTCTTGGCCCTCCTGGTCCTTAGCCTGATCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp CGCGTCTGGATGGTGCCTACCAGAGTGCCTGGAGGTTaGTCTTCCAGCACTTGGAACACCTGGCGCGGCTCG +
Preference number: 6 (lower is better)
Translates to: RVWMVPTRVPGG*SSSTWNTWRGS
Trigger: CGAGCCGCGCCAGGTGTTCCAAGTGCTGGAAGAGCAACCTCCAGGCACTCTGGTAGGCACCATCCAGACGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp CGCCCAGTGAGGGAAGGCACGCCTCTGTCCATCGCCTaGACCGTAAGCGAGTATTGGCGCCGAGCTTCGAAG +
Preference number: 6 (lower is better)
Translates to: RPVREGTPLSIA*TVSEYWRRASK
Trigger: CTTCGAAGCTCGGCGCCAATACTCGCTTACGGTGCAGGCGATGGACAGAGGCGTGCCTTCCCTCACTGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp AATCACCAGGCTTGCCACAGAAGAGCGCGCCTGGACTaGTGCGCCAGGGGGCGCCCCGTAGTTATCAGAGAC +
Preference number: 6 (lower is better)
Translates to: NHQACHRRARLD*CARGRPVVIRD
Trigger: GTCTCTGATAACTACGGGGCGCCCCCTGGCGCAGCAGTCCAGGCGCGCTCTTCTGTGGCAAGCCTGGTGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 72 bp CACCACCATCTCACAGGTCCTTCCCGTGTGCGAGTCTaGGCAGCTACAGGTGAAGCCGGAGTGCAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: HHHLTGPSRVRV*AATGEAGVQAW
Trigger: CCAGGCCTGCACTCCGGCTTCACCTGTAGCTGCCCAGACTCGCACACGGGAAGGACCTGTGAGATGGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp GTCCCTGCTTGCTGCCCTAGCTTCATGGGCAGTGTGTaGTCAGCAGTGCCTGGTGCTGCTGCCTGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: VPACCPSFMGSV*SAVPGAAAWVP
Trigger: GGGCACCCAGGCAGCAGCACCAGGCACTGCTGACAACACACTGCCCATGAAGCTAGGGCAGCAAGCAGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp GCGCGTCTGGATGGTGCCTACCAGAGTGCCTGGAGGTaGCTCTTCCAGCACTTGGAACACCTGGCGCGGCTC +
Preference number: 6 (lower is better)
Translates to: ARLDGAYQSAWR*LFQHLEHLARL
Trigger: GAGCCGCGCCAGGTGTTCCAAGTGCTGGAAGAGCAACCTCCAGGCACTCTGGTAGGCACCATCCAGACGCGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp GAGGGAAGGCACGCCTCTGTCCATCGCCTGCACCGTAAGCGAGTATaGGCGCCGAGCTTCGAAGTCCAGGGGCTCCCGCACCGTGATAAG +
Preference number: 6 (lower is better)
Translates to: EGRHASVHRLHRKRV*APSFEVQGLPHRDK
Trigger: CTTATCACGGTGCGGGAGCCCCTGGACTTCGAAGCTCGGCGCCAATACTCGCTTACGGTGCAGGCGATGGACAGAGGCGTGCCTTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp TGGCGCTGCTCATTGCCCCCGAGAATTTGCACGGAGATGTTCCCGTaGGCCGCGGGAGAATCTGCGTCCGTCACGGTGAGCAGAGCCACC +
Preference number: 6 (lower is better)
Translates to: WRCSLPPRICTEMFP*AAGESASVTVSRAT
Trigger: GGTGGCTCTGCTCACCGTGACGGACGCAGATTCTCCCGCGGCCAACGGGAACATCTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp AGAATCTGCGTCCGTCACGGTGAGCAGAGCCACCACGGTGCCCACTaGAGCATTCTCATCTACCGAGGCGTAGCGCGAGGTGGCCGGGAA +
Preference number: 6 (lower is better)
Translates to: RICVRHGEQSHHGAH*SILIYRGVARGGRE
Trigger: TTCCCGGCCACCTCGCGCTACGCCTCGGTAGATGAGAATGCTCAAGTGGGCACCGTGGTGGCTCTGCTCACCGTGACGGACGCAGATTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp AGACAGGCCACCACCATCTCACAGGTCCTTCCCGTGTaGGAGTCTGGGCAGCTACAGGTGAAGCCGGAGTGC +
Preference number: 6 (lower is better)
Translates to: RQATTISQVLPV*ESGQLQVKPEC
Trigger: GCACTCCGGCTTCACCTGTAGCTGCCCAGACTCGCACACGGGAAGGACCTGTGAGATGGTGGTGGCCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp CGTCGCTGGGCAGGCTCTCGCGGTCGATGGTGGAGGTaGTGTACAGGGCTCCGGTGCTACTGTTTATGGCAA +
Preference number: 6 (lower is better)
Translates to: RRWAGSRGRWWR*CTGLRCYCLWQ
Trigger: TTGCCATAAACAGTAGCACCGGAGCCCTGTACACCACCTCCACCATCGACCGCGAGAGCCTGCCCAGCGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 72 bp TTAGGCTCACCCTTGTCCTCCACCTCAACCAGGAGCTaGTACTGCGGAGTGACCTCACGGTCCAGTCCGCCC +
Preference number: 6 (lower is better)
Translates to: LGSPLSSTSTRS*YCGVTSRSSPP
Trigger: GGGCGGACTGGACCGTGAGGTCACTCCGCAGTACCAGCTCCTGGTTGAGGTGGAGGACAAGGGTGAGCCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 72 bp CAGGGGGCGCCCCGTAGTTATCAGAGACGGAAACTGTaGGGTTGTAGGAAGGGATGCGCTCGCGGTCCAAGG +
Preference number: 6 (lower is better)
Translates to: QGAPRSYQRRKL*GCRKGCARGPR
Trigger: CCTTGGACCGCGAGCGCATCCCTTCCTACAACCTCACAGTTTCCGTCTCTGATAACTACGGGGCGCCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp CGCGGTCGATGGTGGAGGTGGTGTACAGGGCTCCGGTaGTACTGTTTATGGCAAACAGGGCGTGGCTTTCGC +
Preference number: 6 (lower is better)
Translates to: RGRWWRWCTGLR*YCLWQTGRGFR
Trigger: GCGAAAGCCACGCCCTGTTTGCCATAAACAGTAGCACCGGAGCCCTGTACACCACCTCCACCATCGACCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp GCGCACTGTTCCGTTGTCACCCAGGTCCCCGTCAGTTaGCCTGAGCATCAACAGTTCTGTCCCTGTTGGGGC +
Preference number: 6 (lower is better)
Translates to: AHCSVVTQVPVS*PEHQQFCPCWG
Trigger: GCCCCAACAGGGACAGAACTGTTGATGCTCAGGGCAACTGACGGGGACCTGGGTGACAACGGAACAGTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 72 bp TCATTGCCCCCGAGAATTTGCACGGAGATGTTCCCGTaGGCCGCGGGAGAATCTGCGTCCGTCACGGTGAGC +
Preference number: 6 (lower is better)
Translates to: SLPPRICTEMFP*AAGESASVTVS
Trigger: GCTCACCGTGACGGACGCAGATTCTCCCGCGGCCAACGGGAACATCTCCGTGCAAATTCTCGGGGGCAATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 72 bp GAAGGGATGCGCTCGCGGTCCAAGGCGCTGGCCACCTaGATTAGGCTCAGGTTCGGCACTTTGCTGCTTTGC +
Preference number: 6 (lower is better)
Translates to: EGMRSRSKALAT*IRLRFGTLLLC
Trigger: GCAAAGCAGCAAAGTGCCGAACCTGAGCCTAATCAAGGTGGCCAGCGCCTTGGACCGCGAGCGCATCCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp CAGTTGAAAGTCCCTGCTTGCTGCCCTAGCTTCATGGGCAGTGTGTaGTCAGCAGTGCCTGGTGCTGCTGCCTGGGTGCCCACAGGTCCT +
Preference number: 6 (lower is better)
Translates to: QLKVPACCPSFMGSV*SAVPGAAAWVPTGP
Trigger: AGGACCTGTGGGCACCCAGGCAGCAGCACCAGGCACTGCTGACAACACACTGCCCATGAAGCTAGGGCAGCAAGCAGGGACTTTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp AAGGGATGCGCTCGCGGTCCAAGGCGCTGGCCACCTTaGTTAGGCTCAGGTTCGGCACTTTGCTGCTTTGCA +
Preference number: 6 (lower is better)
Translates to: KGCARGPRRWPP*LGSGSALCCFA
Trigger: TGCAAAGCAGCAAAGTGCCGAACCTGAGCCTAATCAAGGTGGCCAGCGCCTTGGACCGCGAGCGCATCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp GCTGCTTTGCACTTCAAAGTGGCGCTGCTCATTGCCCCCGAGAATTaGCACGGAGATGTTCCCGTTGGCCGCGGGAGAATCTGCGTCCGT +
Preference number: 6 (lower is better)
Translates to: AALHFKVALLIAPEN*HGDVPVGRGRICVR
Trigger: ACGGACGCAGATTCTCCCGCGGCCAACGGGAACATCTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp CGGTCCAAGGCGCTGGCCACCTTGATTAGGCTCAGGTTCGGCACTTaGCTGCTTTGCACTTCAAAGTGGCGCTGCTCATTGCCCCCGAGA +
Preference number: 6 (lower is better)
Translates to: RSKALATLIRLRFGT*LLCTSKWRCSLPPR
Trigger: TCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGCAAAGTGCCGAACCTGAGCCTAATCAAGGTGGCCAGCGCCTTGGACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp AGGTTCGGCACTTTGCTGCTTTGCACTTCAAAGTGGCGCTGCTCATaGCCCCCGAGAATTTGCACGGAGATGTTCCCGTTGGCCGCGGGA +
Preference number: 6 (lower is better)
Translates to: RFGTLLLCTSKWRCS*PPRICTEMFPLAAG
Trigger: TCCCGCGGCCAACGGGAACATCTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGCAAAGTGCCGAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp TCAGAACACAGACATGCCCCGCAGGACTTCCAGCTTTaGACACCTTCCCCTGAGGACAGAGGACGCCAAGAC +
Preference number: 6 (lower is better)
Translates to: SEHRHAPQDFQL*TPSPEDRGRQD
Trigger: GTCTTGGCGTCCTCTGTCCTCAGGGGAAGGTGTGCAAAGCTGGAAGTCCTGCGGGGCATGTCTGTGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp CTTGAGCATTCTCATCTACCGAGGCGTAGCGCGAGGTaGCCGGGAAGTAGCGGAACTTCACTACCGGGTCAT +
Preference number: 6 (lower is better)
Translates to: LEHSHLPRRSAR*PGSSGTSLPGH
Trigger: ATGACCCGGTAGTGAAGTTCCGCTACTTCCCGGCCACCTCGCGCTACGCCTCGGTAGATGAGAATGCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 72 bp AAGGGGCTGGACTGTGTCGAGACAGAGGGTTGGGAGTaGGGCATGCTGAGTGGCTTAGGGAGCTGGTTCTCA +
Preference number: 6 (lower is better)
Translates to: KGLDCVETEGWE*GMLSGLGSWFS
Trigger: TGAGAACCAGCTCCCTAAGCCACTCAGCATGCCCAACTCCCAACCCTCTGTCTCGACACAGTCCAGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp TTGGAGAAAGGGGCTGGACTGTGTCGAGACAGAGGGTaGGGAGTTGGGCATGCTGAGTGGCTTAGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: LEKGAGLCRDRG*GVGHAEWLREL
Trigger: CAGCTCCCTAAGCCACTCAGCATGCCCAACTCCCAACCCTCTGTCTCGACACAGTCCAGCCCCTTTCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp CACTTCAAAGTGGCGCTGCTCATTGCCCCCGAGAATTaGCACGGAGATGTTCCCGTTGGCCGCGGGAGAATC +
Preference number: 6 (lower is better)
Translates to: HFKVALLIAPEN*HGDVPVGRGRI
Trigger: GATTCTCCCGCGGCCAACGGGAACATCTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 72 bp GTCTCTGCCTCTTGTAAGGAGAAGCGCACTGTTCCGTaGTCACCCAGGTCCCCGTCAGTTGCCCTGAGCATC +
Preference number: 6 (lower is better)
Translates to: VSASCKEKRTVP*SPRSPSVALSI
Trigger: GATGCTCAGGGCAACTGACGGGGACCTGGGTGACAACGGAACAGTGCGCTTCTCCTTACAAGAGGCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp CTCCGGTCAGTCTCTGCCTCTTGTAAGGAGAAGCGCACTGTTCCGTaGTCACCCAGGTCCCCGTCAGTTGCCCTGAGCATCAACAGTTCT +
Preference number: 6 (lower is better)
Translates to: LRSVSASCKEKRTVP*SPRSPSVALSINSS
Trigger: AGAACTGTTGATGCTCAGGGCAACTGACGGGGACCTGGGTGACAACGGAACAGTGCGCTTCTCCTTACAAGAGGCAGAGACTGACCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 72 bp CTGTTCCGTTGTCACCCAGGTCCCCGTCAGTTGCCCTaGGCATCAACAGTTCTGTCCCTGTTGGGGCATTCT +
Preference number: 6 (lower is better)
Translates to: LFRCHPGPRQLP*ASTVLSLLGHS
Trigger: AGAATGCCCCAACAGGGACAGAACTGTTGATGCTCAGGGCAACTGACGGGGACCTGGGTGACAACGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp GGGCTCCTCGGCATTTTTCACCTCTGCCGGGGCGCCTaGCGACCCATTATTTGTACATCCAAATCGAACGCA +
Preference number: 6 (lower is better)
Translates to: GLLGIFHLCRGA*RPIICTSKSNA
Trigger: TGCGTTCGATTTGGATGTACAAATAATGGGTCGGCAGGCGCCCCGGCAGAGGTGAAAAATGCCGAGGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp AAACAACAGCCAGGGCTCCTCGGCATTTTTCACCTCTaGCGGGGCGCCTGCCGACCCATTATTTGTACATCC +
Preference number: 6 (lower is better)
Translates to: KQQPGLLGIFHL*RGACRPIICTS
Trigger: GGATGTACAAATAATGGGTCGGCAGGCGCCCCGGCAGAGGTGAAAAATGCCGAGGAGCCCTGGCTGTTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp ACTTCAAAGTGGCGCTGCTCATTGCCCCCGAGAATTTaGACGGAGATGTTCCCGTTGGCCGCGGGAGAATCT +
Preference number: 6 (lower is better)
Translates to: TSKWRCSLPPRI*TEMFPLAAGES
Trigger: AGATTCTCCCGCGGCCAACGGGAACATCTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 72 bp CCGATGTCCGAGTCGGTGGCGGTGTCTAAGATGACTTaGCGTCCGCTGCTACTGTCTTCCTTGAAAGTGACC +
Preference number: 6 (lower is better)
Translates to: PMSESVAVSKMT*RPLLLSSLKVT
Trigger: GGTCACTTTCAAGGAAGACAGTAGCAGCGGACGCCAAGTCATCTTAGACACCGCCACCGACTCGGACATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 72 bp ACTCCCTGGTCCCGGGCACTTATATTCAGAACAATCTaGGAAGCAAGTTCACGGTCCAGGCCCCCAGAGGAC +
Preference number: 6 (lower is better)
Translates to: TPWSRALIFRTI*EASSRSRPPED
Trigger: GTCCTCTGGGGGCCTGGACCGTGAACTTGCTTCCCAGATTGTTCTGAATATAAGTGCCCGGGACCAGGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 72 bp TTGGTGTGTGGCTGCGGAACTGCTTGTAGTGTTGAATaGTGTCTGCATCCGAAGGGGCGATGCTGCTGGCGT +
Preference number: 6 (lower is better)
Translates to: LVCGCGTACSVE*CLHPKGRCCWR
Trigger: ACGCCAGCAGCATCGCCCCTTCGGATGCAGACATCATTCAACACTACAAGCAGTTCCGCAGCCACACACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp CAAAGCCAGGGCCCCAGTTCAAAAGGTTGTCCCAGTTaGAAGTCCCTGCTTGCTGCCCTAGCTTCATGGGCA +
Preference number: 6 (lower is better)
Translates to: QSQGPSSKGCPS*KSLLAALASWA
Trigger: TGCCCATGAAGCTAGGGCAGCAAGCAGGGACTTTCAACTGGGACAACCTTTTGAACTGGGGCCCTGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp GGGAAGACCGCGAGCTGGAGCAGCACTCAGAAACTTTaGTCGACACTCATTGATCCCCGCACTTTAGTTCGC +
Preference number: 6 (lower is better)
Translates to: GKTASWSSTQKL*STLIDPRTLVR
Trigger: GCGAACTAAAGTGCGGGGATCAATGAGTGTCGAGCAAAGTTTCTGAGTGCTGCTCCAGCTCGCGGTCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674496.2
CDS CCA 72 bp GTGAATATTTGGAGCGGCGTTCCCTGTCCAACCGCCTaGTTGCTATCAGATCTCCGGATTCTGGGTCGATGC +
Preference number: 6 (lower is better)
Translates to: VNIWSGVPCPTA*LLSDLRILGRC
Trigger: GCATCGACCCAGAATCCGGAGATCTGATAGCAACCAGGCGGTTGGACAGGGAACGCCGCTCCAAATATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp TCCTCTTTGGGATTTTTGGCCTTCTTCCCCCTGCACTaGTTACACAGGATCAGGCTAAGGACCAGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: SSLGFLAFFPLH*LHRIRLRTRRA
Trigger: GGCCCTCCTGGTCCTTAGCCTGATCCTGTGTAACCAGTGCAGGGGGAAGAAGGCCAAAAATCCCAAAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp CTCAGGTTCGGCACTTTGCTGCTTTGCACTTCAAAGTaGCGCTGCTCATTGCCCCCGAGAATTTGCACGGAG +
Preference number: 6 (lower is better)
Translates to: LRFGTLLLCTSK*RCSLPPRICTE
Trigger: CTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGCAAAGTGCCGAACCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 72 bp GCGCTGGCCACCTTGATTAGGCTCAGGTTCGGCACTTaGCTGCTTTGCACTTCAAAGTGGCGCTGCTCATTG +
Preference number: 6 (lower is better)
Translates to: ALATLIRLRFGT*LLCTSKWRCSL
Trigger: CAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGCAAAGTGCCGAACCTGAGCCTAATCAAGGTGGCCAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp ATTTGGAGAAAGGGGCTGGACTGTGTCGAGACAGAGGGTTGGGAGTaGGGCATGCTGAGTGGCTTAGGGAGCTGGTTCTCAAACCTTGAC +
Preference number: 6 (lower is better)
Translates to: IWRKGLDCVETEGWE*GMLSGLGSWFSNLD
Trigger: GTCAAGGTTTGAGAACCAGCTCCCTAAGCCACTCAGCATGCCCAACTCCCAACCCTCTGTCTCGACACAGTCCAGCCCCTTTCTCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp CTGGAGCAGCACTCAGAAACTTTGCTCGACACTCATTaGTCCCCGCACTTTAGTTCGCCTGGACTCCCCCTA +
Preference number: 6 (lower is better)
Translates to: LEQHSETLLDTH*SPHFSSPGLPL
Trigger: TAGGGGGAGTCCAGGCGAACTAAAGTGCGGGGATCAATGAGTGTCGAGCAAAGTTTCTGAGTGCTGCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674496.2
CDS GCA 72 bp ATATTTGGAGCGGCGTTCCCTGTCCAACCGCCTGGTTaGTATCAGATCTCCGGATTCTGGGTCGATGCGAAA +
Preference number: 6 (lower is better)
Translates to: IFGAAFPVQPPG*YQISGFWVDAK
Trigger: TTTCGCATCGACCCAGAATCCGGAGATCTGATAGCAACCAGGCGGTTGGACAGGGAACGCCGCTCCAAATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp GTGGCTGCGGAACTGCTTGTAGTGTTGAATGATGTCTaGATCCGAAGGGGCGATGCTGCTGGCGTTGTCAAT +
Preference number: 6 (lower is better)
Translates to: VAAELLVVLNDV*IRRGDAAGVVN
Trigger: ATTGACAACGCCAGCAGCATCGCCCCTTCGGATGCAGACATCATTCAACACTACAAGCAGTTCCGCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp CTTTGCTGCTTTGCACTTCAAAGTGGCGCTGCTCATTaGCCCCGAGAATTTGCACGGAGATGTTCCCGTTGG +
Preference number: 6 (lower is better)
Translates to: LCCFALQSGAAH*PREFARRCSRW
Trigger: CCAACGGGAACATCTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp ACCTTGATTAGGCTCAGGTTCGGCACTTTGCTGCTTTaGACTTCAAAGTGGCGCTGCTCATTGCCCCCGAGA +
Preference number: 6 (lower is better)
Translates to: TLIRLRFGTLLL*TSKWRCSLPPR
Trigger: TCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGCAAAGTGCCGAACCTGAGCCTAATCAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 72 bp AGTGACAAGCACACTGGTGGAACTGGAAAGAGGCTCTaGGGATCCCGCATCACTGCAGACCACTACCAAAGT +
Preference number: 6 (lower is better)
Translates to: SDKHTGGTGKRL*GSRITADHYQS
Trigger: ACTTTGGTAGTGGTCTGCAGTGATGCGGGATCCCCAGAGCCTCTTTCCAGTTCCACCAGTGTGCTTGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000509444.1
ENST00000674496.2
CDS CCA 72 bp TCCAGAAGACTCACATTTATGCGAGCCATTGATGACTaGGGAGGGGAGCCCAGATCTGTGGCCAGAACCAAC +
Preference number: 6 (lower is better)
Translates to: SRRLTFMRAIDD*GGEPRSVARTN
Trigger: GTTGGTTCTGGCCACAGATCTGGGCTCCCCTCCCCAGTCATCAATGGCTCGCATAAATGTGAGTCTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 72 bp AATATTTGGAGCGGCGTTCCCTGTCCAACCGCCTGGTaGCTATCAGATCTCCGGATTCTGGGTCGATGCGAA +
Preference number: 6 (lower is better)
Translates to: NIWSGVPCPTAW*LSDLRILGRCE
Trigger: TTCGCATCGACCCAGAATCCGGAGATCTGATAGCAACCAGGCGGTTGGACAGGGAACGCCGCTCCAAATATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp TTCTGGCAGATGGCACCATTCTTGCAAGGACTCTGCAGGCACTCATaGATATCTCTCTCACACGCCCTACCAGTGAAGCCATCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: FWQMAPFLQGLCRHS*ISLSHALPVKPSGQ
Trigger: CTGCCCAGATGGCTTCACTGGTAGGGCGTGTGAGAGAGATATCAATGAGTGCCTGCAGAGTCCTTGCAAGAATGGTGCCATCTGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp GTAGAAGATTTGGAGAAAGGGGCTGGACTGTGTCGAGACAGAGGGTaGGGAGTTGGGCATGCTGAGTGGCTTAGGGAGCTGGTTCTCAAA +
Preference number: 6 (lower is better)
Translates to: VEDLEKGAGLCRDRG*GVGHAEWLRELVLK
Trigger: TTTGAGAACCAGCTCCCTAAGCCACTCAGCATGCCCAACTCCCAACCCTCTGTCTCGACACAGTCCAGCCCCTTTCTCCAAATCTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp AGGGGAGCCCAGATCTGTGGCCAGAACCAACAGGGAGTAGAAGGCTaGCTCTTCTCTGTCCAAGGAGGAAATAGTACTCAACCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: RGAQICGQNQQGVEG*LFSVQGGNSTQPPR
Trigger: TCTGGGAGGTTGAGTACTATTTCCTCCTTGGACAGAGAAGAGCAAGCCTTCTACTCCCTGTTGGTTCTGGCCACAGATCTGGGCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 72 bp TGCTCCAGCTGGGGATGGAGTCTGAGTCAAAGGCACTaGCAAAGGTCACATGAGTTCCTATTGGGACCCCTT +
Preference number: 6 (lower is better)
Translates to: CSSWGWSLSQRH*QRSHEFLLGPL
Trigger: AAGGGGTCCCAATAGGAACTCATGTGACCTTTGTCAGTGCCTTTGACTCAGACTCCATCCCCAGCTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp CCTTGTTCTAGACAGTGGCCTTCTGCAGTCCTCCTCTaGAGAAGACCTCCCATGGTCTGCACTGCAGATACT +
Preference number: 6 (lower is better)
Translates to: PCSRQWPSAVLL*RRPPMVCTADT
Trigger: AGTATCTGCAGTGCAGACCATGGGAGGTCTTCTTCAGAGGAGGACTGCAGAAGGCCACTGTCTAGAACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp GGAAGCAATGACAGTAGCCAAAACACTCGAAGGAGCTaGGATACTGATAGAGTGTGCAACGGGAGCCACGGG +
Preference number: 6 (lower is better)
Translates to: GSNDSSQNTRRS*DTDRVCNGSHG
Trigger: CCCGTGGCTCCCGTTGCACACTCTATCAGTATCTCAGCTCCTTCGAGTGTTTTGGCTACTGTCATTGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp GGAGGAGAAGATTCCAGTGGAATCTGCCCAATCGGCTaGTTTAGGCGACTCCCTGGTCTAGAACCATGTGAT +
Preference number: 6 (lower is better)
Translates to: GGEDSSGICPIG*FRRLPGLEPCD
Trigger: ATCACATGGTTCTAGACCAGGGAGTCGCCTAAAGCAGCCGATTGGGCAGATTCCACTGGAATCTTCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp TTCGGCACTTTGCTGCTTTGCACTTCAAAGTGGCGCTaGTCATTGCCCCCGAGAATTTGCACGGAGATGTTC +
Preference number: 6 (lower is better)
Translates to: FGTLLLCTSKWR*SLPPRICTEMF
Trigger: GAACATCTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGCAAAGTGCCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp AATGACACTGCTGCCATGACCAGTAATCCATACATGTaGCACCATGTTGGCATGGGCTGCGAGTACAAGCGC +
Preference number: 6 (lower is better)
Translates to: NDTAAMTSNPYM*HHVGMGCEYKR
Trigger: GCGCTTGTACTCGCAGCCCATGCCAACATGGTGGCACATGTATGGATTACTGGTCATGGCAGCAGTGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp CTAGGAGAGTTACTACAAGCTGGGCATAGGACACCTTaGGGTGAACTCCCTGGTCCCGGGCACTTATATTCA +
Preference number: 6 (lower is better)
Translates to: LGELLQAGHRTP*GELPGPGHLYS
Trigger: TGAATATAAGTGCCCGGGACCAGGGAGTTCACCCCAAGGTGTCCTATGCCCAGCTTGTAGTAACTCTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 72 bp TCAAACTGCTTGCTCCTAAGGGCATGGGGGATTGCCTaGCAAAGCCTAGGGGACTGTGCCTCTGGATTGAAA +
Preference number: 6 (lower is better)
Translates to: SNCLLLRAWGIA*QSLGDCASGLK
Trigger: TTTCAATCCAGAGGCACAGTCCCCTAGGCTTTGCAAGGCAATCCCCCATGCCCTTAGGAGCAAGCAGTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp TCTAAGATGACTTGGCGTCCGCTGCTACTGTCTTCCTaGAAAGTGACCACGATAGAGGGGTCCGGGAAAACG +
Preference number: 6 (lower is better)
Translates to: SKMTWRPLLLSS*KVTTIEGSGKT
Trigger: CGTTTTCCCGGACCCCTCTATCGTGGTCACTTTCAAGGAAGACAGTAGCAGCGGACGCCAAGTCATCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 72 bp ACTTTGCTGCTTTGCACTTCAAAGTGGCGCTGCTCATaGCCCCCGAGAATTTGCACGGAGATGTTCCCGTTG +
Preference number: 6 (lower is better)
Translates to: TLLLCTSKWRCS*PPRICTEMFPL
Trigger: CAACGGGAACATCTCCGTGCAAATTCTCGGGGGCAATGAGCAGCGCCACTTTGAAGTGCAAAGCAGCAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp AGAGGAGAGCTGTGGGACACCCATGTCAGATGCCAAGATCTCTATTaGGTAGGAGCCAGCATGAACATCCAGGGGCCCAAGCAGACTAAT +
Preference number: 6 (lower is better)
Translates to: RGELWDTHVRCQDLY*VGASMNIQGPKQTN
Trigger: ATTAGTCTGCTTGGGCCCCTGGATGTTCATGCTGGCTCCTACCAAATAGAGATCTTGGCATCTGACATGGGTGTCCCACAGCTCTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 90 bp CTAGCAGTGAATATTTGGAGCGGCGTTCCCTGTCCAACCGCCTGGTaGCTATCAGATCTCCGGATTCTGGGTCGATGCGAAAACTATCAT +
Preference number: 6 (lower is better)
Translates to: LAVNIWSGVPCPTAW*LSDLRILGRCENYH
Trigger: ATGATAGTTTTCGCATCGACCCAGAATCCGGAGATCTGATAGCAACCAGGCGGTTGGACAGGGAACGCCGCTCCAAATATTCACTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp ACTGGTGGCAGGACCTGTGCTCAGCAAGTAATAAGTAAAGGGACCTaGATTTGGAGGGAGATCAGGGTCAGTGGACTGAAGGGTCATCAC +
Preference number: 6 (lower is better)
Translates to: TGGRTCAQQVISKGT*IWREIRVSGLKGHH
Trigger: GTGATGACCCTTCAGTCCACTGACCCTGATCTCCCTCCAAATCAAGGTCCCTTTACTTATTACTTGCTGAGCACAGGTCCTGCCACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp TGGTTCTCAAACCTTGACCATATGAAGGCTGGTAAGTCAAACTGCTaGCTCCTAAGGGCATGGGGGATTGCCTTGCAAAGCCTAGGGGAC +
Preference number: 6 (lower is better)
Translates to: WFSNLDHMKAGKSNC*LLRAWGIALQSLGD
Trigger: GTCCCCTAGGCTTTGCAAGGCAATCCCCCATGCCCTTAGGAGCAAGCAGTTTGACTTACCAGCCTTCATATGGTCAAGGTTTGAGAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp CCATGGTCTGCACTGCAGATACTTGGGTTTCTAGGGCGAGGTGTGTaGAGCCTCTCCACTTCTTCAATAGAAAGTCCGACTGGAGGAGAA +
Preference number: 6 (lower is better)
Translates to: PWSALQILGFLGRGV*SLSTSSIESPTGGE
Trigger: TTCTCCTCCAGTCGGACTTTCTATTGAAGAAGTGGAGAGGCTCAACACACCTCGCCCTAGAAACCCAAGTATCTGCAGTGCAGACCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp CCACCTTTACTCCACTCTGCCGGAGAAGGATCTCTTTaGTGCTTTCAAAGAAGGTGGCTACGCCACTGGGAT +
Preference number: 6 (lower is better)
Translates to: PPLLHSAGEGSL*CFQRRWLRHWD
Trigger: ATCCCAGTGGCGTAGCCACCTTCTTTGAAAGCATCAAAGAGATCCTTCTCCGGCAGAGTGGAGTAAAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp TCATCAGGGTCCACAGCTTTGGCCTGGAAAATGCTGTaGCCTGCCTGCCAATTCTCCACCACATTTACACTC +
Preference number: 6 (lower is better)
Translates to: SSGSTALAWKML*PACQFSTTFTL
Trigger: GAGTGTAAATGTGGTGGAGAATTGGCAGGCAGGTCACAGCATTTTCCAGGCCAAAGCTGTGGACCCTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS TCA 72 bp TGGGGCCTCAGATCCTCTGGGGCTAGCTGCTTCTATTaGTATCACGTTTGTGCCAATGGGTTCTCCTTCCTT +
Preference number: 6 (lower is better)
Translates to: WGLRSSGASCFY*YHVCANGFSFL
Trigger: AAGGAAGGAGAACCCATTGGCACAAACGTGATATCAATAGAAGCAGCTAGCCCCAGAGGATCTGAGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS TCA 72 bp CCCAGTGAGTCCCTCTTTGCAATGACACTGCTGCCATaGCCAGTAATCCATACATGTGCCACCATGTTGGCA +
Preference number: 6 (lower is better)
Translates to: PSESLFAMTLLP*PVIHTCATMLA
Trigger: TGCCAACATGGTGGCACATGTATGGATTACTGGTCATGGCAGCAGTGTCATTGCAAAGAGGGACTCACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp TTCAAAAGGTTGTCCCAGTTGAAAGTCCCTGCTTGCTaGCCTAGCTTCATGGGCAGTGTGTTGTCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: FKRLSQLKVPAC*PSFMGSVLSAV
Trigger: CACTGCTGACAACACACTGCCCATGAAGCTAGGGCAGCAAGCAGGGACTTTCAACTGGGACAACCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp CAGTTCAAAAGGTTGTCCCAGTTGAAAGTCCCTGCTTaGTGCCCTAGCTTCATGGGCAGTGTGTTGTCAGCA +
Preference number: 6 (lower is better)
Translates to: QFKRLSQLKVPA*CPSFMGSVLSA
Trigger: TGCTGACAACACACTGCCCATGAAGCTAGGGCAGCAAGCAGGGACTTTCAACTGGGACAACCTTTTGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp GACACTAGAGGAGAGCTGTGGGACACCCATGTCAGATaGCAAGATCTCTATTTGGTAGGAGCCAGCATGAAC +
Preference number: 6 (lower is better)
Translates to: DTRGELWDTHVR*QDLYLVGASMN
Trigger: GTTCATGCTGGCTCCTACCAAATAGAGATCTTGGCATCTGACATGGGTGTCCCACAGCTCTCCTCTAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CCA 72 bp ATCAGAAGAGGATTCTGGAGCTGGAATGCCATCCGCTaGATTCCTTGTTCTAGACAGTGGCCTTCTGCAGTC +
Preference number: 6 (lower is better)
Translates to: IRRGFWSWNAIR*IPCSRQWPSAV
Trigger: GACTGCAGAAGGCCACTGTCTAGAACAAGGAATCCAGCGGATGGCATTCCAGCTCCAGAATCCTCTTCTGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp CGGCCCTGCGACCGTGGTACCTTCGAGGCTTCAGTCTaGCTCCATAATTATCTTCATCATCTGCATCAGATT +
Preference number: 6 (lower is better)
Translates to: RPCDRGTFEASV*LHNYLHHLHQI
Trigger: AATCTGATGCAGATGATGAAGATAATTATGGAGCCAGACTGAAGCCTCGAAGGTACCACGGTCGCAGGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp GTCAGTTGCCCTGAGCATCAACAGTTCTGTCCCTGTTaGGGCATTCTCAACCACAGACACATCATACCCTTC +
Preference number: 6 (lower is better)
Translates to: VSCPEHQQFCPC*GILNHRHIIPF
Trigger: GAAGGGTATGATGTGTCTGTGGTTGAGAATGCCCCAACAGGGACAGAACTGTTGATGCTCAGGGCAACTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 72 bp CCAGGTAAAGACATGCTCCTTGCTCCCGGTCCAGAATaGCTGCGGTCTGAATTATACCAGTATGTCGTCCAA +
Preference number: 6 (lower is better)
Translates to: PGKDMLLAPGPE*LRSELYQYVVQ
Trigger: TTGGACGACATACTGGTATAATTCAGACCGCAGCCATTCTGGACCGGGAGCAAGGAGCATGTCTTTACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 72 bp TCCACCTTTACTCCACTCTGCCGGAGAAGGATCTCTTaGATGCTTTCAAAGAAGGTGGCTACGCCACTGGGA +
Preference number: 6 (lower is better)
Translates to: STFTPLCRRRIS*MLSKKVATPLG
Trigger: TCCCAGTGGCGTAGCCACCTTCTTTGAAAGCATCAAAGAGATCCTTCTCCGGCAGAGTGGAGTAAAGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp ATGGCACCATTCTTGCAAGGACTCTGCAGGCACTCATaGATATCTCTCTCACACGCCCTACCAGTGAAGCCA +
Preference number: 6 (lower is better)
Translates to: MAPFLQGLCRHS*ISLSHALPVKP
Trigger: TGGCTTCACTGGTAGGGCGTGTGAGAGAGATATCAATGAGTGCCTGCAGAGTCCTTGCAAGAATGGTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp CATGCTCCTTGCTCCCGGTCCAGAATGGCTGCGGTCTaGATTATACCAGTATGTCGTCCAATAGTAAAGAGG +
Preference number: 6 (lower is better)
Translates to: HAPCSRSRMAAV*IIPVCRPIVKR
Trigger: CCTCTTTACTATTGGACGACATACTGGTATAATTCAGACCGCAGCCATTCTGGACCGGGAGCAAGGAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS GCA 72 bp CCCGCATATCCTGGCAGACACTTGCATAAGAAAGGCTaGAGAGGTTCATTTGCCACGATGATGACTGGAAGA +
Preference number: 6 (lower is better)
Translates to: PAYPGRHLHKKG*RGSFATMMTGR
Trigger: TCTTCCAGTCATCATCGTGGCAAATGAACCTCTGCAGCCTTTCTTATGCAAGTGTCTGCCAGGATATGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp TTTCACACCAGCTACCCGCATATCCTGGCAGACACTTaGATAAGAAAGGCTGCAGAGGTTCATTTGCCACGA +
Preference number: 6 (lower is better)
Translates to: FHTSYPHILADT*IRKAAEVHLPR
Trigger: TCGTGGCAAATGAACCTCTGCAGCCTTTCTTATGCAAGTGTCTGCCAGGATATGCGGGTAGCTGGTGTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp AGGGTCCACAGCTTTGGCCTGGAAAATGCTGTGACCTaGCTGCCAATTCTCCACCACATTTACACTCTCTAT +
Preference number: 6 (lower is better)
Translates to: RVHSFGLENAVT*LPILHHIYTLY
Trigger: ATAGAGAGTGTAAATGTGGTGGAGAATTGGCAGGCAGGTCACAGCATTTTCCAGGCCAAAGCTGTGGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS GCA 72 bp CTGATCCTTGAGAGGCTGAGGGATCCCCTGATCTGTTaGTATGACTGTAAAGCTAAACACAGCAGTCCCTCT +
Preference number: 6 (lower is better)
Translates to: LILERLRDPLIC*YDCKAKHSSPS
Trigger: AGAGGGACTGCTGTGTTTAGCTTTACAGTCATAGCAACAGATCAGGGGATCCCTCAGCCTCTCAAGGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS GCA 72 bp TTTTTCTATGGCATAAACATCCACCAGGTAAAGACATaGTCCTTGCTCCCGGTCCAGAATGGCTGCGGTCTG +
Preference number: 6 (lower is better)
Translates to: FFYGINIHQVKT*SLLPVQNGCGL
Trigger: CAGACCGCAGCCATTCTGGACCGGGAGCAAGGAGCATGTCTTTACCTGGTGGATGTTTATGCCATAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CCA 72 bp GTCCAACCGCCTGGTTGCTATCAGATCTCCGGATTCTaGGTCGATGCGAAAACTATCATCAGCTCCACTAAT +
Preference number: 6 (lower is better)
Translates to: VQPPGCYQISGF*VDAKTIISSTN
Trigger: ATTAGTGGAGCTGATGATAGTTTTCGCATCGACCCAGAATCCGGAGATCTGATAGCAACCAGGCGGTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp CTCCATTCACACCAGAGTCATCATCCGTGGCTAAAATaGCTGCTACCAAAGAACCAGGGATTGTGTCCTCAG +
Preference number: 6 (lower is better)
Translates to: LHSHQSHHPWLK*LLPKNQGLCPQ
Trigger: CTGAGGACACAATCCCTGGTTCTTTGGTAGCAGCCATTTTAGCCACGGATGATGACTCTGGTGTGAATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp ACAGTCAGATCAAACGTGCCATCTGTGGACCTTGGCTaGGAATTCAGATCACAAGTACCCCCTGGAATACTG +
Preference number: 6 (lower is better)
Translates to: TVRSNVPSVDLG*EFRSQVPPGIL
Trigger: CAGTATTCCAGGGGGTACTTGTGATCTGAATTCCCAGCCAAGGTCCACAGATGGCACGTTTGATCTGACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp AAGGACAGTCAGATCAAACGTGCCATCTGTGGACCTTaGCTGGGAATTCAGATCACAAGTACCCCCTGGAAT +
Preference number: 6 (lower is better)
Translates to: KDSQIKRAICGP*LGIQITSTPWN
Trigger: ATTCCAGGGGGTACTTGTGATCTGAATTCCCAGCCAAGGTCCACAGATGGCACGTTTGATCTGACTGTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp TCTCCTGCTCTGGAGATGCCAAAGGGGCGCTGGGGATaGTTTCTGAGTTGTGAGGAATATCAGTTTCATCAT +
Preference number: 6 (lower is better)
Translates to: SPALEMPKGRWG*FLSCEEYQFHH
Trigger: ATGATGAAACTGATATTCCTCACAACTCAGAAACCATCCCCAGCGCCCCTTTGGCATCTCCAGAGCAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp ATTTCACACCAGCTACCCGCATATCCTGGCAGACACTaGCATAAGAAAGGCTGCAGAGGTTCATTTGCCACG +
Preference number: 6 (lower is better)
Translates to: ISHQLPAYPGRH*HKKGCRGSFAT
Trigger: CGTGGCAAATGAACCTCTGCAGCCTTTCTTATGCAAGTGTCTGCCAGGATATGCGGGTAGCTGGTGTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp AAATTTTGGTGTGTGGCTGCGGAACTGCTTGTAGTGTaGAATGATGTCTGCATCCGAAGGGGCGATGCTGCT +
Preference number: 6 (lower is better)
Translates to: KFWCVAAELLVV*NDVCIRRGDAA
Trigger: AGCAGCATCGCCCCTTCGGATGCAGACATCATTCAACACTACAAGCAGTTCCGCAGCCACACACCAAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp AACCTTGACCATATGAAGGCTGGTAAGTCAAACTGCTaGCTCCTAAGGGCATGGGGGATTGCCTTGCAAAGC +
Preference number: 6 (lower is better)
Translates to: NLDHMKAGKSNC*LLRAWGIALQS
Trigger: GCTTTGCAAGGCAATCCCCCATGCCCTTAGGAGCAAGCAGTTTGACTTACCAGCCTTCATATGGTCAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp CTGTCCCCAGCAGATATGCTATATTTGACAGTACCATaGGTACCCAAGTCTGGGTCAGTGGCAGACACAGTG +
Preference number: 6 (lower is better)
Translates to: LSPADMLYLTVP*VPKSGSVADTV
Trigger: CACTGTGTCTGCCACTGACCCAGACTTGGGTACCAATGGTACTGTCAAATATAGCATATCTGCTGGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 72 bp CCATTTGGCCCAAAGTCTTTATCTACAGCACTTACTTaGCCCACAAACGACCCAGCCCTCTGCTCTTCTTCG +
Preference number: 6 (lower is better)
Translates to: PFGPKSLSTALT*PTNDPALCSSS
Trigger: CGAAGAAGAGCAGAGGGCTGGGTCGTTTGTGGGCAAAGTAAGTGCTGTAGATAAAGACTTTGGGCCAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 90 bp TCCACAGATTCCACCTTTACTCCACTCTGCCGGAGAAGGATCTCTTaGATGCTTTCAAAGAAGGTGGCTACGCCACTGGGATTCACATAC +
Preference number: 6 (lower is better)
Translates to: STDSTFTPLCRRRIS*MLSKKVATPLGFTY
Trigger: GTATGTGAATCCCAGTGGCGTAGCCACCTTCTTTGAAAGCATCAAAGAGATCCTTCTCCGGCAGAGTGGAGTAAAGGTGGAATCTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp ATGCCTTGTGCTGCCAAAGCTTGGCTGGGTTCCAGAGGCCTTCCATaGACTGCAAACTCCATTATACACCCAACAAAATCATGGCTTTCC +
Preference number: 6 (lower is better)
Translates to: MPCAAKAWLGSRGLP*TANSIIHPTKSWLS
Trigger: GGAAAGCCATGATTTTGTTGGGTGTATAATGGAGTTTGCAGTCAATGGAAGGCCTCTGGAACCCAGCCAAGCTTTGGCAGCACAAGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp TCATCGCTGCATCTCTATCTCTTGCAGAAACAGTTCTaGCAATGGACCCAATGCTATGGCTCTCAGGGATGG +
Preference number: 6 (lower is better)
Translates to: SSLHLYLLQKQF*QWTQCYGSQGW
Trigger: CCATCCCTGAGAGCCATAGCATTGGGTCCATTGTCAGAACTGTTTCTGCAAGAGATAGAGATGCAGCGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp CGCCTCCTCGCTCAGGTTCACTCTGTACACTTGCTGTaGAAAGACAGGAGGATGGTCATTGATGTCATTAAC +
Preference number: 6 (lower is better)
Translates to: RLLAQVHSVHLL*KDRRMVIDVIN
Trigger: GTTAATGACATCAATGACCATCCTCCTGTCTTTTCACAGCAAGTGTACAGAGTGAACCTGAGCGAGGAGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 72 bp TTGAGATCCATGGTGGATGCAGACACACTACCCACATaGTATCCCAGCGCCACGTTCTCAAAAACCACAAAG +
Preference number: 6 (lower is better)
Translates to: LRSMVDADTLPT*YPSATFSKTTK
Trigger: CTTTGTGGTTTTTGAGAACGTGGCGCTGGGATATCATGTGGGTAGTGTGTCTGCATCCACCATGGATCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS TCA 72 bp AGCCTCAGACCAAGGTACACTAGAGTATCCCTTGGATaGGGCCCAAGGTCCACATGCTTTAAATCAAACGCT +
Preference number: 6 (lower is better)
Translates to: SLRPRYTRVSLG*GPRSTCFKSNA
Trigger: AGCGTTTGATTTAAAGCATGTGGACCTTGGGCCTCATCCAAGGGATACTCTAGTGTACCTTGGTCTGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678072.1
CDS GCA 72 bp GCATTTGCACCCTCATCAGCATCCATGGCTGTCAGCTaGATAATCTTAGAGCCATCTCCAATGTTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: AFAPSSASMAVS*IILEPSPMFSS
Trigger: AGAGGAGAACATTGGAGATGGCTCTAAGATTATGCAGCTGACAGCCATGGATGCTGATGAGGGTGCAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp GACAATGGACCCAATGCTATGGCTCTCAGGGATGGTTaGACTCATGTGGCTTTGAGAGAATTCAGGTGTATG +
Preference number: 6 (lower is better)
Translates to: DNGPNAMALRDG*THVALREFRCM
Trigger: CATACACCTGAATTCTCTCAAAGCCACATGAGTGCAACCATCCCTGAGAGCCATAGCATTGGGTCCATTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp TCAAACCTTGACCATATGAAGGCTGGTAAGTCAAACTaGTTGCTCCTAAGGGCATGGGGGATTGCCTTGCAA +
Preference number: 6 (lower is better)
Translates to: SNLDHMKAGKSN*LLLRAWGIALQ
Trigger: TTGCAAGGCAATCCCCCATGCCCTTAGGAGCAAGCAGTTTGACTTACCAGCCTTCATATGGTCAAGGTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp GAGATAACTGATGTTGGAATTGAGATCCATGGTGGATaGAGACACACTACCCACATGATATCCCAGCGCCAC +
Preference number: 6 (lower is better)
Translates to: EITDVGIEIHGG*RHTTHMISQRH
Trigger: GTGGCGCTGGGATATCATGTGGGTAGTGTGTCTGCATCCACCATGGATCTCAATTCCAACATCAGTTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 72 bp AGGACCTGTGCTCAGCAAGTAATAAGTAAAGGGACCTaGATTTGGAGGGAGATCAGGGTCAGTGGACTGAAG +
Preference number: 6 (lower is better)
Translates to: RTCAQQVISKGT*IWREIRVSGLK
Trigger: CTTCAGTCCACTGACCCTGATCTCCCTCCAAATCAAGGTCCCTTTACTTATTACTTGCTGAGCACAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp GCTGCCAAAGCTTGGCTGGGTTCCAGAGGCCTTCCATaGACTGCAAACTCCATTATACACCCAACAAAATCA +
Preference number: 6 (lower is better)
Translates to: AAKAWLGSRGLP*TANSIIHPTKS
Trigger: TGATTTTGTTGGGTGTATAATGGAGTTTGCAGTCAATGGAAGGCCTCTGGAACCCAGCCAAGCTTTGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp CAAAGCCTAGGGGACTGTGCCTCTGGATTGAAAATTTaGGTGTGTGGCTGCGGAACTGCTTGTAGTGTTGAA +
Preference number: 6 (lower is better)
Translates to: QSLGDCASGLKI*VCGCGTACSVE
Trigger: TTCAACACTACAAGCAGTTCCGCAGCCACACACCAAAATTTTCAATCCAGAGGCACAGTCCCCTAGGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp CAGATCTGTGGCCAGAACCAACAGGGAGTAGAAGGCTaGCTCTTCTCTGTCCAAGGAGGAAATAGTACTCAA +
Preference number: 6 (lower is better)
Translates to: QICGQNQQGVEG*LFSVQGGNSTQ
Trigger: TTGAGTACTATTTCCTCCTTGGACAGAGAAGAGCAAGCCTTCTACTCCCTGTTGGTTCTGGCCACAGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 72 bp TATGGCATAAACATCCACCAGGTAAAGACATGCTCCTaGCTCCCGGTCCAGAATGGCTGCGGTCTGAATTAT +
Preference number: 6 (lower is better)
Translates to: YGINIHQVKTCS*LPVQNGCGLNY
Trigger: ATAATTCAGACCGCAGCCATTCTGGACCGGGAGCAAGGAGCATGTCTTTACCTGGTGGATGTTTATGCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 90 bp GGACCCAATGCTATGGCTCTCAGGGATGGTTGCACTCATGTGGCTTaGAGAGAATTCAGGTGTATGGTAGTTTTCCTCAGTGACAGTTAT +
Preference number: 6 (lower is better)
Translates to: GPNAMALRDGCTHVA*REFRCMVVFLSDSY
Trigger: ATAACTGTCACTGAGGAAAACTACCATACACCTGAATTCTCTCAAAGCCACATGAGTGCAACCATCCCTGAGAGCCATAGCATTGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp CTTGCTTCTCCTTCCCAGCCTTGTGGCATAGTTGAAAATGCCAGGTaGGCAGGTGTCACCATGCATTTCCAAAGTATTACCATCCCTTAT +
Preference number: 6 (lower is better)
Translates to: LASPSQPCGIVENAR*AGVTMHFQSITIPY
Trigger: ATAAGGGATGGTAATACTTTGGAAATGCATGGTGACACCTGCCAACCTGGCATTTTCAACTATGCCACAAGGCTGGGAAGGAGAAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp AACCACAAAGCTGTAGGCAACCTGACTGAATACAGGTGGGTTGTCTaGAGTGTCCAATACAGTGATGGTTACTATTGCCTGGTTGGGAGA +
Preference number: 6 (lower is better)
Translates to: NHKAVGNLTEYRWVV*SVQYSDGYYCLVGR
Trigger: TCTCCCAACCAGGCAATAGTAACCATCACTGTATTGGACACTCAAGACAACCCACCTGTATTCAGTCAGGTTGCCTACAGCTTTGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 72 bp CTGCCAAAGCTTGGCTGGGTTCCAGAGGCCTTCCATTaGCTGCAAACTCCATTATACACCCAACAAAATCAT +
Preference number: 6 (lower is better)
Translates to: LPKLGWVPEAFH*LQTPLYTQQNH
Trigger: ATGATTTTGTTGGGTGTATAATGGAGTTTGCAGTCAATGGAAGGCCTCTGGAACCCAGCCAAGCTTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp ATCTCGATGTGCTTGATTGGGTGGAATTCCTCCAAGTaGTATAGTAAGCACATCAAGGCCACCGAAGTCCTG +
Preference number: 6 (lower is better)
Translates to: ISMCLIGWNSSK*YSKHIKATEVL
Trigger: CAGGACTTCGGTGGCCTTGATGTGCTTACTATATCACTTGGAGGAATTCCACCCAATCAAGCACATCGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp CTCTGGAGATGCCAAAGGGGCGCTGGGGATGGTTTCTaGGTTGTGAGGAATATCAGTTTCATCATAGATAAG +
Preference number: 6 (lower is better)
Translates to: LWRCQRGAGDGF*VVRNISFIIDK
Trigger: CTTATCTATGATGAAACTGATATTCCTCACAACTCAGAAACCATCCCCAGCGCCCCTTTGGCATCTCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp CAAAGCTTGGCTGGGTTCCAGAGGCCTTCCATTGACTaGAAACTCCATTATACACCCAACAAAATCATGGCT +
Preference number: 6 (lower is better)
Translates to: QSLAGFQRPSID*KLHYTPNKIMA
Trigger: AGCCATGATTTTGTTGGGTGTATAATGGAGTTTGCAGTCAATGGAAGGCCTCTGGAACCCAGCCAAGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp TGTGCTCAGCAAGTAATAAGTAAAGGGACCTTGATTTaGAGGGAGATCAGGGTCAGTGGACTGAAGGGTCAT +
Preference number: 6 (lower is better)
Translates to: CAQQVISKGTLI*REIRVSGLKGH
Trigger: ATGACCCTTCAGTCCACTGACCCTGATCTCCCTCCAAATCAAGGTCCCTTTACTTATTACTTGCTGAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp GTTTTGCAAACACAGTTGAAGCTTCCTGGAAAATTCTaGCAGATGGCACCATTCTTGCAAGGACTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: VLQTQLKLPGKF*QMAPFLQGLCR
Trigger: CCTGCAGAGTCCTTGCAAGAATGGTGCCATCTGCCAGAATTTTCCAGGAAGCTTCAACTGTGTTTGCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp GAAAGATTCATGGGAGTCACTATCAGAAGAGGATTCTaGAGCTGGAATGCCATCCGCTGGATTCCTTGTTCT +
Preference number: 6 (lower is better)
Translates to: ERFMGVTIRRGF*SWNAIRWIPCS
Trigger: AGAACAAGGAATCCAGCGGATGGCATTCCAGCTCCAGAATCCTCTTCTGATAGTGACTCCCATGAATCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp TCACACATACTGTTCTGCTTCCCCATCTTTGGGGACTaGTTTAGTTGTCCCAGCTTTGCCTTCTTCATTTGC +
Preference number: 6 (lower is better)
Translates to: SHILFCFPIFGD*FSCPSFAFFIC
Trigger: GCAAATGAAGAAGGCAAAGCTGGGACAACTAAACCAGTCCCCAAAGATGGGGAAGCAGAACAGTATGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp GGATCCTGTGATGGTGGTGACAAGAGAGCTGACTGGTaGGTTTTCAGGAAACATGAACGTTTGTTCTTTGGC +
Preference number: 6 (lower is better)
Translates to: GSCDGGDKRADW*VFRKHERLFFG
Trigger: GCCAAAGAACAAACGTTCATGTTTCCTGAAAACCAACCAGTCAGCTCTCTTGTCACCACCATCACAGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp GCTATGGCTCTCAGGGATGGTTGCACTCATGTGGCTTaGAGAGAATTCAGGTGTATGGTAGTTTTCCTCAGT +
Preference number: 6 (lower is better)
Translates to: AMALRDGCTHVA*REFRCMVVFLS
Trigger: ACTGAGGAAAACTACCATACACCTGAATTCTCTCAAAGCCACATGAGTGCAACCATCCCTGAGAGCCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp AAGCTTCCTGGAAAATTCTGGCAGATGGCACCATTCTaGCAAGGACTCTGCAGGCACTCATTGATATCTCTC +
Preference number: 6 (lower is better)
Translates to: KLPGKFWQMAPF*QGLCRHSLISL
Trigger: GAGAGATATCAATGAGTGCCTGCAGAGTCCTTGCAAGAATGGTGCCATCTGCCAGAATTTTCCAGGAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp GCTGTAGGCAACCTGACTGAATACAGGTGGGTTGTCTaGAGTGTCCAATACAGTGATGGTTACTATTGCCTG +
Preference number: 6 (lower is better)
Translates to: AVGNLTEYRWVV*SVQYSDGYYCL
Trigger: CAGGCAATAGTAACCATCACTGTATTGGACACTCAAGACAACCCACCTGTATTCAGTCAGGTTGCCTACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp TCTATATCTATTTCACACCAGCTACCCGCATATCCTGGCAGACACTaGCATAAGAAAGGCTGCAGAGGTTCATTTGCCACGATGATGACT +
Preference number: 6 (lower is better)
Translates to: SISISHQLPAYPGRH*HKKGCRGSFATMMT
Trigger: AGTCATCATCGTGGCAAATGAACCTCTGCAGCCTTTCTTATGCAAGTGTCTGCCAGGATATGCGGGTAGCTGGTGTGAAATAGATATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp GCAAAGAAAACTCGGATGTTGCTCGTGACTGTGCTGTaGACTCCATCATTGCTAAGGACAGTCAGATCAAAC +
Preference number: 6 (lower is better)
Translates to: AKKTRMLLVTVL*TPSLLRTVRSN
Trigger: GTTTGATCTGACTGTCCTTAGCAATGATGGAGTTCACAGCACAGTCACGAGCAACATCCGAGTTTTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp TGCTCTCCTGGCAATCACAGTGTGAAAATGTCCATCTaGCACCTTCTTCATGGTGGTGAGCTTATATGTACC +
Preference number: 6 (lower is better)
Translates to: CSPGNHSVKMSI*HLLHGGELICT
Trigger: GGTACATATAAGCTCACCACCATGAAGAAGGTGTCAGATGGACATTTTCACACTGTGATTGCCAGGAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp CGTTCTCAAAAACCACAAAGCTGTAGGCAACCTGACTaGATACAGGTGGGTTGTCTTGAGTGTCCAATACAG +
Preference number: 6 (lower is better)
Translates to: RSQKPQSCRQPD*IQVGCLECPIQ
Trigger: CTGTATTGGACACTCAAGACAACCCACCTGTATTCAGTCAGGTTGCCTACAGCTTTGTGGTTTTTGAGAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS GCA 72 bp ACCAGAATCCTTGGTAACCACAGACAGATAGAAGTCTaGAATCTGCTCTCTGTCAATCTCTCTGGTTGTGCT +
Preference number: 6 (lower is better)
Translates to: TRILGNHRQIEV*NLLSVNLSGCA
Trigger: AGCACAACCAGAGAGATTGACAGAGAGCAGATTGCAGACTTCTATCTGTCTGTGGTTACCAAGGATTCTGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp AGTCCTTTACTGTTGGTACGCCGAGACGAAGTAAGATaGTGTTATCCACTGTGGCATTGGAAAATCCAGCAA +
Preference number: 6 (lower is better)
Translates to: SPLLLVRRDEVR*CYPLWHWKIQQ
Trigger: TTGCTGGATTTTCCAATGCCACAGTGGATAACAGCATCTTACTTCGTCTCGGCGTACCAACAGTAAAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp CAAAGGGTTCAGCAGAGTGTACTCAATATAGCTGTTTaGGCCACTATCTGGGTCAGTTGCTTGAGCTTTGAA +
Preference number: 6 (lower is better)
Translates to: QRVQQSVLNIAV*ATIWVSCLSFE
Trigger: TTCAAAGCTCAAGCAACTGACCCAGATAGTGGCCCAAACAGCTATATTGAGTACACTCTGCTGAACCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp TGGGGCATTCTCAACCACAGACACATCATACCCTTCTaGCTGGCTAAATACTGGCTTTTCATCATTCACATC +
Preference number: 6 (lower is better)
Translates to: WGILNHRHIIPF*LAKYWLFIIHI
Trigger: GATGTGAATGATGAAAAGCCAGTATTTAGCCAGCCAGAAGGGTATGATGTGTCTGTGGTTGAGAATGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CCA 72 bp AACCACAAAGCTGTAGGCAACCTGACTGAATACAGGTaGGTTGTCTTGAGTGTCCAATACAGTGATGGTTAC +
Preference number: 6 (lower is better)
Translates to: NHKAVGNLTEYR*VVLSVQYSDGY
Trigger: GTAACCATCACTGTATTGGACACTCAAGACAACCCACCTGTATTCAGTCAGGTTGCCTACAGCTTTGTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp AAATGTCGGTGGGTTATCATTTACATCCAACAAAATAATGGAGACTaGAGCAGTGCTTGTGAATCTGGAGGCTGGAATCTGTGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: KCRWVIIYIQQNNGD*SSACESGGWNLWQV
Trigger: GACCTGCCACAGATTCCAGCCTCCAGATTCACAAGCACTGCTCAAGTCTCCATTATTTTGTTGGATGTAAATGATAACCCACCGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp GATGTAGCTACCTCCAGGCTCATTCTCCTTAATGTGAGCAAAGTATaGGACCGGGTAGAAGACAGGGCTGTTATCATTTATATCCAGAAG +
Preference number: 6 (lower is better)
Translates to: DVATSRLILLNVSKV*DRVEDRAVIIYIQK
Trigger: CTTCTGGATATAAATGATAACAGCCCTGTCTTCTACCCGGTCCAATACTTTGCTCACATTAAGGAGAATGAGCCTGGAGGTAGCTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS TCA 72 bp GTGATGATTTGTCCTGTCGATGGGTTGATCGTGAACTaGGAGTTTCCACCGATGATCCTTATAACTGCATTC +
Preference number: 6 (lower is better)
Translates to: VMICPVDGLIVN*EFPPMILITAF
Trigger: GAATGCAGTTATAAGGATCATCGGTGGAAACTCTCAGTTCACGATCAACCCATCGACAGGACAAATCATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335110.5
CDS TCA 72 bp CCAACAAAATCATGGCTTTCCACGTGTCCTCTTCTCTaGAGGATTGGTTCTAGAGATCTGATACCTCCAACT +
Preference number: 6 (lower is better)
Translates to: PTKSWLSTCPLL*RIGSRDLIPPT
Trigger: AGTTGGAGGTATCAGATCTCTAGAACCAATCCTTCAGAGAAGAGGACACGTGGAAAGCCATGATTTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp GGAAAGCTAGGAGGATTGTCATTAAAGTCCCTCACGTaGATAACCACTGACATTGTAGATGAACGAGGAGGT +
Preference number: 6 (lower is better)
Translates to: GKLGGLSLKSLT*ITTDIVDERGG
Trigger: ACCTCCTCGTTCATCTACAATGTCAGTGGTTATTCACGTGAGGGACTTTAATGACAATCCTCCTAGCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS TCA 72 bp ACCATTAATGTCTGCATCAGGGTCATGTGCAGTCACTaGAATGACAGATGTACCGATGGGAATGTTCTCAAC +
Preference number: 6 (lower is better)
Translates to: TINVCIRVMCSH*NDRCTDGNVLN
Trigger: GTTGAGAACATTCCCATCGGTACATCTGTCATTTCAGTGACTGCACATGACCCTGATGCAGACATTAATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS GCA 72 bp TGGAACTGGAAAGAGGCTCTGGGGATCCCGCATCACTaGAGACCACTACCAAAGTATAATTATCTTTTGTTT +
Preference number: 6 (lower is better)
Translates to: WNWKEALGIPHH*RPLPKYNYLLF
Trigger: AAACAAAAGATAATTATACTTTGGTAGTGGTCTGCAGTGATGCGGGATCCCCAGAGCCTCTTTCCAGTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000509444.1
ENST00000674496.2
CDS GCA 72 bp TGTGACATCTGTACTTACAGTCCACCCAGAATCATGTaGGGAAACTCGAATTCTGTAACGGTCTGTATCTTC +
Preference number: 6 (lower is better)
Translates to: CDICTYSPPRIM*GNSNSVTVCIF
Trigger: GAAGATACAGACCGTTACAGAATTCGAGTTTCCGCACATGATTCTGGGTGGACTGTAAGTACAGATGTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp TGCTCTTCTCTATCAATCACATTTGCTGTGGTAAGCTaGCCAGTGACCTGGTTGATAGCAAACATACCTTTC +
Preference number: 6 (lower is better)
Translates to: CSSLSITFAVVS*PVTWLIANIPF
Trigger: GAAAGGTATGTTTGCTATCAACCAGGTCACTGGGCAGCTTACCACAGCAAATGTGATTGATAGAGAAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS GCA 72 bp TGCCTGCCAATTCTCCACCACATTTACACTCTCTATTaGCTGAAGGAAATGGGGAGAGTTGTCATTCAAATC +
Preference number: 6 (lower is better)
Translates to: CLPILHHIYTLY*LKEMGRVVIQI
Trigger: GATTTGAATGACAACTCTCCCCATTTCCTTCAGGCAATAGAGAGTGTAAATGTGGTGGAGAATTGGCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CCA 72 bp AGAGGATCCTGTGATGGTGGTGACAAGAGAGCTGACTaGTTGGTTTTCAGGAAACATGAACGTTTGTTCTTT +
Preference number: 6 (lower is better)
Translates to: RGSCDGGDKRAD*LVFRKHERLFF
Trigger: AAAGAACAAACGTTCATGTTTCCTGAAAACCAACCAGTCAGCTCTCTTGTCACCACCATCACAGGATCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp TTACTTCCAGACTGTTCACACCAAAAGGCTCCAACATaGCACCTCGTAAGCTTTGCCTTAACAAATATTCCC +
Preference number: 6 (lower is better)
Translates to: LLPDCSHQKAPT*HLVSFALTNIP
Trigger: GGGAATATTTGTTAAGGCAAAGCTTACGAGGTGCCATGTTGGAGCCTTTTGGTGTGAACAGTCTGGAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp AGCCTCACTTCACCATCAATGGTCCCAATACTGAACTaGTTTCCCAAAGGGTTCAGCAGAGTGTACTCAATA +
Preference number: 6 (lower is better)
Translates to: SLTSPSMVPILN*FPKGFSRVYSI
Trigger: TATTGAGTACACTCTGCTGAACCCTTTGGGAAACAAGTTCAGTATTGGGACCATTGATGGTGAAGTGAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp ACCTCCAGGCTCATTCTCCTTAATGTGAGCAAAGTATaGGACCGGGTAGAAGACAGGGCTGTTATCATTTAT +
Preference number: 6 (lower is better)
Translates to: TSRLILLNVSKV*DRVEDRAVIIY
Trigger: ATAAATGATAACAGCCCTGTCTTCTACCCGGTCCAATACTTTGCTCACATTAAGGAGAATGAGCCTGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394329.9
CDS CAA 90 bp TTGTCCCTGAATCCACTGCTTGAATTACAAGGGAATAGGCAGGTGTaGCTTCATAGTCTAATTTGCCAATTAGTGTTACCTGACCAGAGG +
Preference number: 6 (lower is better)
Translates to: LSLNPLLELQGNRQV*LHSLICQLVLPDQR
Trigger: CCTCTGGTCAGGTAACACTAATTGGCAAATTAGACTATGAAGCAACACCTGCCTATTCCCTTGTAATTCAAGCAGTGGATTCAGGGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 90 bp GATGGGTCTGCAGCAAGGGCGTTTTGTGATATAAACATTGGGACATaGTCATTGAGGTCTGTAACCAAAATGGTCACGTTCTTCAAAGCA +
Preference number: 6 (lower is better)
Translates to: DGSAARAFCDINIGT*SLRSVTKMVTFFKA
Trigger: TGCTTTGAAGAACGTGACCATTTTGGTTACAGACCTCAATGACAATGTCCCAATGTTTATATCACAAAACGCCCTTGCTGCAGACCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS TCA 72 bp ATTTCTACAATAAACACTTCAGCTGCAGCTAATGGTTaGGCTAAGGTATCACCCACTGCCACTACCGTTGTT +
Preference number: 6 (lower is better)
Translates to: ISTINTSAAANG*AKVSPTATTVV
Trigger: AACAACGGTAGTGGCAGTGGGTGATACCTTAGCTCAACCATTAGCTGCAGCTGAAGTGTTTATTGTAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335110.5
CDS TCA 72 bp TGTGTTAGGGTCAATGACAAAGAGGTCACTGTCAGATaGCTGTACAGTATACGCAATCACAGCATTTGTTCC +
Preference number: 6 (lower is better)
Translates to: CVRVNDKEVTVR*LYSIRNHSICS
Trigger: GGAACAAATGCTGTGATTGCGTATACTGTACAGTCATCTGACAGTGACCTCTTTGTCATTGACCCTAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp AGAGATCTGATACCTCCAACTGTAACTCTATTTGGCTaGACATCAAGAGTCCAGTCATCTGAAACTGCCACA +
Preference number: 6 (lower is better)
Translates to: RDLIPPTVTLFG*TSRVQSSETAT
Trigger: TGTGGCAGTTTCAGATGACTGGACTCTTGATGTTCAGCCAAATAGAGTTACAGTTGGAGGTATCAGATCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp ATAGCGAACCTGTCCATTTGTGCCTTCATCTCCATCTaGTGCGAACACTTGTATTATATCTGTTCCAGTAAG +
Preference number: 6 (lower is better)
Translates to: IANLSICAFISI*CEHLYYICSSK
Trigger: CTTACTGGAACAGATATAATACAAGTGTTCGCAGCAGATGGAGATGAAGGCACAAATGGACAGGTTCGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp AATCACATTTACGGTCACACTGCAGTAACCAGTTCTTaGAACCCATCCTCCATCTATAGCACTAATCGTCAT +
Preference number: 6 (lower is better)
Translates to: NHIYGHTAVTSS*NPSSIYSTNRH
Trigger: ATGACGATTAGTGCTATAGATGGAGGATGGGTTGCAAGAACTGGTTACTGCAGTGTGACCGTAAATGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp CGATCTAATTCTGCAGTAACGGTGATCTGTCCTGTCTaGGGATTAATAGAAAAGGCACCATTTTCATTCCCT +
Preference number: 6 (lower is better)
Translates to: RSNSAVTVICPV*GLIEKAPFSFP
Trigger: AGGGAATGAAAATGGTGCCTTTTCTATTAATCCGCAGACAGGACAGATCACCGTTACTGCAGAATTAGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp CAAGGGAATAGGCAGGTGTTGCTTCATAGTCTAATTTaGCAATTAGTGTTACCTGACCAGAGGTACTGTCTA +
Preference number: 6 (lower is better)
Translates to: QGNRQVLLHSLI*QLVLPDQRYCL
Trigger: TAGACAGTACCTCTGGTCAGGTAACACTAATTGGCAAATTAGACTATGAAGCAACACCTGCCTATTCCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CCA 72 bp CTCTACCGTGAGATCCAGCATGTCCGTTGGAAATACTaGTGGATTGTCATTGATATCCTGAAGTGTTATTTC +
Preference number: 6 (lower is better)
Translates to: LYREIQHVRWKY*WIVIDILKCYF
Trigger: GAAATAACACTTCAGGATATCAATGACAATCCACCAGTATTTCCAACGGACATGCTGGATCTCACGGTAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp CAGAGTGTACTCAATATAGCTGTTTGGGCCACTATCTaGGTCAGTTGCTTGAGCTTTGAAAACAACAGTATC +
Preference number: 6 (lower is better)
Translates to: QSVLNIAVWATI*VSCLSFENNSI
Trigger: GATACTGTTGTTTTCAAAGCTCAAGCAACTGACCCAGATAGTGGCCCAAACAGCTATATTGAGTACACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp GGTCACGTTCTTCAAAGCATACCGTCTAGTTTCTATTaGCACAGCTTGATCATTGGCTTTTACAGTCAACTC +
Preference number: 6 (lower is better)
Translates to: GHVLQSIPSSFY*HSLIIGFYSQL
Trigger: GAGTTGACTGTAAAAGCCAATGATCAAGCTGTGCCAATAGAAACTAGACGGTATGCTTTGAAGAACGTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 72 bp TGTCAGATGACTGTACAGTATACGCAATCACAGCATTaGTTCCAGAGTCAGCATCTGTTGCATTTAGGTGGA +
Preference number: 6 (lower is better)
Translates to: CQMTVQYTQSQH*FQSQHLLHLGG
Trigger: TCCACCTAAATGCAACAGATGCTGACTCTGGAACAAATGCTGTGATTGCGTATACTGTACAGTCATCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp AATGAAGATAGTGGTTGGTCAAGAAGTCCTTTACTGTaGGTACGCCGAGACGAAGTAAGATGCTGTTATCCA +
Preference number: 6 (lower is better)
Translates to: NEDSGWSRSPLL*VRRDEVRCCYP
Trigger: TGGATAACAGCATCTTACTTCGTCTCGGCGTACCAACAGTAAAGGACTTCTTGACCAACCACTATCTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp GCAGCAAGGGCGTTTTGTGATATAAACATTGGGACATaGTCATTGAGGTCTGTAACCAAAATGGTCACGTTC +
Preference number: 6 (lower is better)
Translates to: AARAFCDINIGT*SLRSVTKMVTF
Trigger: GAACGTGACCATTTTGGTTACAGACCTCAATGACAATGTCCCAATGTTTATATCACAAAACGCCCTTGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 90 bp GCGAACCTGTCCATTTGTGCCTTCATCTCCATCTGCTGCGAACACTaGTATTATATCTGTTCCAGTAAGTGTGTTTTCATTAATCTCCAC +
Preference number: 6 (lower is better)
Translates to: ANLSICAFISICCEH*YYICSSKCVFINLH
Trigger: GTGGAGATTAATGAAAACACACTTACTGGAACAGATATAATACAAGTGTTCGCAGCAGATGGAGATGAAGGCACAAATGGACAGGTTCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp AGAGAGCTGACTGGTTGGTTTTCAGGAAACATGAACGTTTGTTCTTaGGCTCTCACTTTAGGGAAATCGGCCTTATTCACGAATCTAACA +
Preference number: 6 (lower is better)
Translates to: RELTGWFSGNMNVCS*ALTLGKSALFTNLT
Trigger: TGTTAGATTCGTGAATAAGGCCGATTTCCCTAAAGTGAGAGCCAAAGAACAAACGTTCATGTTTCCTGAAAACCAACCAGTCAGCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp TCTGCAGCAAGGGCGTTTTGTGATATAAACATTGGGACATTGTCATaGAGGTCTGTAACCAAAATGGTCACGTTCTTCAAAGCATACCGT +
Preference number: 6 (lower is better)
Translates to: SAARAFCDINIGTLS*RSVTKMVTFFKAYR
Trigger: ACGGTATGCTTTGAAGAACGTGACCATTTTGGTTACAGACCTCAATGACAATGTCCCAATGTTTATATCACAAAACGCCCTTGCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS TCA 72 bp ATTCTTGTCAACAGTAAACTGCCCAAGGCTATCACCTaGAGCAATGCTATAAGTCAATTGAGAGTTGATGCC +
Preference number: 6 (lower is better)
Translates to: ILVNSKLPKAIT*SNAISQLRVDA
Trigger: GGCATCAACTCTCAATTGACTTATAGCATTGCTTCAGGTGATAGCCTTGGGCAGTTTACTGTTGACAAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp GGGTTATCATTTACATCCAACAAAATAATGGAGACTTaGGCAGTGCTTGTGAATCTGGAGGCTGGAATCTGT +
Preference number: 6 (lower is better)
Translates to: GLSFTSNKIMET*AVLVNLEAGIC
Trigger: ACAGATTCCAGCCTCCAGATTCACAAGCACTGCTCAAGTCTCCATTATTTTGTTGGATGTAAATGATAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp TGCCAATTCTCCACCACATTTACACTCTCTATTGCCTaGAGGAAATGGGGAGAGTTGTCATTCAAATCCTTA +
Preference number: 6 (lower is better)
Translates to: CQFSTTFTLSIA*RKWGELSFKSL
Trigger: TAAGGATTTGAATGACAACTCTCCCCATTTCCTTCAGGCAATAGAGAGTGTAAATGTGGTGGAGAATTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS TCA 72 bp AGAATCGAGAATTCACAGGTTCTGACTCAGAAAGGGTaGCTTCATAAGAGAGTTGGTCAAACACTGGTGAAT +
Preference number: 6 (lower is better)
Translates to: RIENSQVLTQKG*LHKRVGQTLVN
Trigger: ATTCACCAGTGTTTGACCAACTCTCTTATGAAGTCACCCTTTCTGAGTCAGAACCTGTGAATTCTCGATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS TCA 72 bp CACTGTAGCTCGCATATTGAATACTGGAATGATAGTTaGGGATGGGAAGGTAGTACAAAGGCCAACACATTA +
Preference number: 6 (lower is better)
Translates to: HCSSHIEYWNDS*GWEGSTKANTL
Trigger: TAATGTGTTGGCCTTTGTACTACCTTCCCATCCTCAACTATCATTCCAGTATTCAATATGCGAGCTACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678072.1
CDS GCA 72 bp AACTCTGATGGTAGTAAATTGTCCCCCACCATCTTCTaGTCGAACAGTGAGGATATAATATTGCTGTACTTC +
Preference number: 6 (lower is better)
Translates to: NSDGSKLSPTIF*SNSEDIILLYF
Trigger: GAAGTACAGCAATATTATATCCTCACTGTTCGAGCAGAAGATGGTGGGGGACAATTTACTACCATCAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp GCTGTTCCATTTTTCCCAATTAGAAAAGTGTGCCAGTaGCCGTCTGCAACATATACTTCAGGAATATTTCTC +
Preference number: 6 (lower is better)
Translates to: AVPFFPIRKVCQ*PSATYTSGIFL
Trigger: GAGAAATATTCCTGAAGTATATGTTGCAGACGGCCACTGGCACACTTTTCTAATTGGGAAAAATGGAACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp TTGTCTTCATTACCACCAAACAGAACATATGAGAGTTaGCTGTTAGATCCTCGATCATCATCTCTTGCCACC +
Preference number: 6 (lower is better)
Translates to: LSSLPPNRTYES*LLDPRSSSLAT
Trigger: GGTGGCAAGAGATGATGATCGAGGATCTAACAGCAAACTCTCATATGTTCTGTTTGGTGGTAATGAAGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp ACTCCAAGTTCTCCACTGGCTGAGAGAGTAAAAGCATaGTCTTCATTACCACCAAACAGAACATATGAGAGT +
Preference number: 6 (lower is better)
Translates to: TPSSPLAERVKA*SSLPPNRTYES
Trigger: ACTCTCATATGTTCTGTTTGGTGGTAATGAAGACAATGCTTTTACTCTCTCAGCCAGTGGAGAACTTGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp AAATGGACAATGACAATAATAAGAATCCACACCACTTaGGCAGGAACCACCATTAAAGCAGGGGTTGCATTC +
Preference number: 6 (lower is better)
Translates to: KWTMTIIRIHTT*AGTTIKAGVAF
Trigger: GAATGCAACCCCTGCTTTAATGGTGGTTCCTGCCAAAGTGGTGTGGATTCTTATTATTGTCATTGTCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp CTCTGTGTTACTCCAAGTTCTCCACTGGCTGAGAGAGTAAAAGCATaGTCTTCATTACCACCAAACAGAACATATGAGAGTTTGCTGTTA +
Preference number: 6 (lower is better)
Translates to: LCVTPSSPLAERVKA*SSLPPNRTYESLLL
Trigger: TAACAGCAAACTCTCATATGTTCTGTTTGGTGGTAATGAAGACAATGCTTTTACTCTCTCAGCCAGTGGAGAACTTGGAGTAACACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp CAAAATCTGGCTGCACCATTTCAAAAGAATACCTTACTTCTCCATTaGGCCCAAAGTCTTTATCTACAGCACTTACTTTGCCCACAAACG +
Preference number: 6 (lower is better)
Translates to: QNLAAPFQKNTLLLH*AQSLYLQHLLCPQT
Trigger: CGTTTGTGGGCAAAGTAAGTGCTGTAGATAAAGACTTTGGGCCAAATGGAGAAGTAAGGTATTCTTTTGAAATGGTGCAGCCAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 90 bp ATTGTTGTGAAATACGCTTTACTGGCAAATGTGGGGACATTGTCATaGACATCATCTACTATGACGTTGATTGTTCCAGTTCCAGTCAAG +
Preference number: 6 (lower is better)
Translates to: IVVKYALLANVGTLS*TSSTMTLIVPVPVK
Trigger: CTTGACTGGAACTGGAACAATCAACGTCATAGTAGATGATGTCAATGACAATGTCCCCACATTTGCCAGTAAAGCGTATTTCACAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp TCAGGAATTGTTGTGAAATACGCTTTACTGGCAAATGTGGGGACATaGTCATTGACATCATCTACTATGACGTTGATTGTTCCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: SGIVVKYALLANVGT*SLTSSTMTLIVPVP
Trigger: TGGAACTGGAACAATCAACGTCATAGTAGATGATGTCAATGACAATGTCCCCACATTTGCCAGTAAAGCGTATTTCACAACAATTCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp GGTCACGTTCTTCAAAGCATACCGTCTAGTTTCTATTGGCACAGCTaGATCATTGGCTTTTACAGTCAACTCAAAGAGATTAGCAAATTC +
Preference number: 6 (lower is better)
Translates to: GHVLQSIPSSFYWHS*IIGFYSQLKEISKF
Trigger: GAATTTGCTAATCTCTTTGAGTTGACTGTAAAAGCCAATGATCAAGCTGTGCCAATAGAAACTAGACGGTATGCTTTGAAGAACGTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 90 bp TGTGCCAATGGGTTCTCCTTCCTTCAAAATAGTTATATATTTGGGTaGAGTAAAAACAGGTCCATCAAGGCCCTGAAGAATGATGGTCAA +
Preference number: 6 (lower is better)
Translates to: CANGFSFLQNSYIFG*SKNRSIKALKNDGQ
Trigger: TTGACCATCATTCTTCAGGGCCTTGATGGACCTGTTTTTACTCAACCCAAATATATAACTATTTTGAAGGAAGGAGAACCCATTGGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS TCA 72 bp TCACTGACAGTGATATTAATTCTCATATCCGAGGACTaGAGACCATCATCAGCACGAACTAGCAGTGAATAT +
Preference number: 6 (lower is better)
Translates to: SLTVILILISED*RPSSARTSSEY
Trigger: ATATTCACTGCTAGTTCGTGCTGATGATGGTCTTCAGTCCTCGGATATGAGAATTAATATCACTGTCAGTGA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp AGTGATATAGTAAGCACATCAAGGCCACCGAAGTCCTaGGTAGGGTGGATAATATCTCTGTTATATATTCTG +
Preference number: 6 (lower is better)
Translates to: SDIVSTSRPPKS*VGWIISLLYIL
Trigger: CAGAATATATAACAGAGATATTATCCACCCTACTCAGGACTTCGGTGGCCTTGATGTGCTTACTATATCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp AGCTTGTACTTTAAAGAATCGAGAATTCACAGGTTCTaGCTCAGAAAGGGTGACTTCATAAGAGAGTTGGTC +
Preference number: 6 (lower is better)
Translates to: SLYFKESRIHRF*LRKGDFIRELV
Trigger: GACCAACTCTCTTATGAAGTCACCCTTTCTGAGTCAGAACCTGTGAATTCTCGATTCTTTAAAGTACAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS GCA 72 bp AGTATTACCATCCCTTATAGGAAGATGCAATTCCCTTaGTGGGCTGTTTCTATAGAACGTAGAAGATTTGGA +
Preference number: 6 (lower is better)
Translates to: SITIPYRKMQFP*WAVSIERRRFG
Trigger: TCCAAATCTTCTACGTTCTATAGAAACAGCCCAGCAAGGGAATTGCATCTTCCTATAAGGGATGGTAATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CCA 72 bp ATTACCATCCCTTATAGGAAGATGCAATTCCCTTGCTaGGCTGTTTCTATAGAACGTAGAAGATTTGGAGAA +
Preference number: 6 (lower is better)
Translates to: ITIPYRKMQFPC*AVSIERRRFGE
Trigger: TTCTCCAAATCTTCTACGTTCTATAGAAACAGCCCAGCAAGGGAATTGCATCTTCCTATAAGGGATGGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp TCCCGATCTATTTCAGCATTAGTATATATAGTCCCTTaGACTTCATCTATGGTAAAGTGGTTGCCTCTTGGC +
Preference number: 6 (lower is better)
Translates to: SRSISALVYIVP*TSSMVKWLPLG
Trigger: GCCAAGAGGCAACCACTTTACCATAGATGAAGTCAAAGGGACTATATATACTAATGCTGAAATAGATCGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 72 bp ACTGAAGATTCACACATTTTCCCTGTGTATCCAGTTTaGCAAACACAGTTGAAGCTTCCTGGAAAATTCTGG +
Preference number: 6 (lower is better)
Translates to: TEDSHIFPVYPV*QTQLKLPGKFW
Trigger: CCAGAATTTTCCAGGAAGCTTCAACTGTGTTTGCAAAACTGGATACACAGGGAAAATGTGTGAATCTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp AGTGTACTCAATATAGCTGTTTGGGCCACTATCTGGGTCAGTTGCTaGAGCTTTGAAAACAACAGTATCAATAGGTGTATTTTCTGGAAT +
Preference number: 6 (lower is better)
Translates to: SVLNIAVWATIWVSC*SFENNSINRCIFWN
Trigger: ATTCCAGAAAATACACCTATTGATACTGTTGTTTTCAAAGCTCAAGCAACTGACCCAGATAGTGGCCCAAACAGCTATATTGAGTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp ACTGAAATGACAGATGTACCGATGGGAATGTTCTCAACAATAGACTaGAAAATATCTCCAGGAGGAAAGCTAGGAGGATTGTCATTAAAG +
Preference number: 6 (lower is better)
Translates to: TEMTDVPMGMFSTID*KISPGGKLGGLSLK
Trigger: CTTTAATGACAATCCTCCTAGCTTTCCTCCTGGAGATATTTTCAAGTCTATTGTTGAGAACATTCCCATCGGTACATCTGTCATTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS TCA 72 bp TGTGAAAATGTCCATCTGACACCTTCTTCATGGTGGTaGGCTTATATGTACCACTGCCTAAATTATAAGAGA +
Preference number: 6 (lower is better)
Translates to: CENVHLTPSSWW*AYMYHCLNYKR
Trigger: TCTCTTATAATTTAGGCAGTGGTACATATAAGCTCACCACCATGAAGAAGGTGTCAGATGGACATTTTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp ACCATTAAAGCAGGGGTTGCATTCACAGTAATTGACTaGAGATTCACACATTTTCCCTGTGTATCCAGTTTT +
Preference number: 6 (lower is better)
Translates to: TIKAGVAFTVID*RFTHFPCVSSF
Trigger: AAAACTGGATACACAGGGAAAATGTGTGAATCTTCAGTCAATTACTGTGAATGCAACCCCTGCTTTAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp GGGATTCACATACTGATTATGATTTCGCTTCACAGCTaGCAAAAGAAACGTTCTATTGTTCTCTTCATATGC +
Preference number: 6 (lower is better)
Translates to: GIHILIMISLHS*QKKRSIVLFIC
Trigger: GCATATGAAGAGAACAATAGAACGTTTCTTTTGGCAGCTGTGAAGCGAAATCATAATCAGTATGTGAATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp AATATAGCTGTTTGGGCCACTATCTGGGTCAGTTGCTaGAGCTTTGAAAACAACAGTATCAATAGGTGTATT +
Preference number: 6 (lower is better)
Translates to: NIAVWATIWVSC*SFENNSINRCI
Trigger: AATACACCTATTGATACTGTTGTTTTCAAAGCTCAAGCAACTGACCCAGATAGTGGCCCAAACAGCTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp AAATACGCTTTACTGGCAAATGTGGGGACATTGTCATaGACATCATCTACTATGACGTTGATTGTTCCAGTT +
Preference number: 6 (lower is better)
Translates to: KYALLANVGTLS*TSSTMTLIVPV
Trigger: AACTGGAACAATCAACGTCATAGTAGATGATGTCAATGACAATGTCCCCACATTTGCCAGTAAAGCGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp GTTGTGAAATACGCTTTACTGGCAAATGTGGGGACATaGTCATTGACATCATCTACTATGACGTTGATTGTT +
Preference number: 6 (lower is better)
Translates to: VVKYALLANVGT*SLTSSTMTLIV
Trigger: AACAATCAACGTCATAGTAGATGATGTCAATGACAATGTCCCCACATTTGCCAGTAAAGCGTATTTCACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp AATCCACTGCTTGAATTACAAGGGAATAGGCAGGTGTaGCTTCATAGTCTAATTTGCCAATTAGTGTTACCT +
Preference number: 6 (lower is better)
Translates to: NPLLELQGNRQV*LHSLICQLVLP
Trigger: AGGTAACACTAATTGGCAAATTAGACTATGAAGCAACACCTGCCTATTCCCTTGTAATTCAAGCAGTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 72 bp CTTCAAAGCATACCGTCTAGTTTCTATTGGCACAGCTaGATCATTGGCTTTTACAGTCAACTCAAAGAGATT +
Preference number: 6 (lower is better)
Translates to: LQSIPSSFYWHS*IIGFYSQLKEI
Trigger: AATCTCTTTGAGTTGACTGTAAAAGCCAATGATCAAGCTGTGCCAATAGAAACTAGACGGTATGCTTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 72 bp AGGGCGTTTTGTGATATAAACATTGGGACATTGTCATaGAGGTCTGTAACCAAAATGGTCACGTTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: RAFCDINIGTLS*RSVTKMVTFFK
Trigger: TTTGAAGAACGTGACCATTTTGGTTACAGACCTCAATGACAATGTCCCAATGTTTATATCACAAAACGCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 90 bp GTAAATGGAAGACTTGCATCCATTATAGAATATCTACTAATTGCATaGATCCCAATGTCTTCATCAGAAGTTGTGACACGGGTAACTGTG +
Preference number: 6 (lower is better)
Translates to: VNGRLASIIEYLLIA*IPMSSSEVVTRVTV
Trigger: CACAGTTACCCGTGTCACAACTTCTGATGAAGACATTGGGATCAATGCAATTAGTAGATATTCTATAATGGATGCAAGTCTTCCATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp AAAAGCATTGTCTTCATTACCACCAAACAGAACATATaGGAGTTTGCTGTTAGATCCTCGATCATCATCTCT +
Preference number: 6 (lower is better)
Translates to: KSIVFITTKQNI*EFAVRSSIIIS
Trigger: AGAGATGATGATCGAGGATCTAACAGCAAACTCTCATATGTTCTGTTTGGTGGTAATGAAGACAATGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp TTCAAAGCATACCGTCTAGTTTCTATTGGCACAGCTTaGTCATTGGCTTTTACAGTCAACTCAAAGAGATTA +
Preference number: 6 (lower is better)
Translates to: FKAYRLVSIGTA*SLAFTVNSKRL
Trigger: TAATCTCTTTGAGTTGACTGTAAAAGCCAATGATCAAGCTGTGCCAATAGAAACTAGACGGTATGCTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394329.9
ENST00000678072.1
CDS CAA 72 bp ACAATGTGCTCTACGAGACATTTGCATCAGAATCCCTaGAGGGACTTGTTAAAATATGTTTCAAGAACTTTC +
Preference number: 6 (lower is better)
Translates to: TMCSTRHLHQNP*RDLLKYVSRTF
Trigger: GAAAGTTCTTGAAACATATTTTAACAAGTCCCTCAAGGGATTCTGATGCAAATGTCTCGTAGAGCACATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678072.1
CDS CAA 90 bp AAGTCAGAAATCAGGGAGGATGCTACTGAAATCCACCCCGTATCATaGTCCAACTTAAATTTTCCTAAATGGTTATCATTAGAAATGAAA +
Preference number: 6 (lower is better)
Translates to: KSEIREDATEIHPVS*SNLNFPKWLSLEMK
Trigger: TTTCATTTCTAATGATAACCATTTAGGAAAATTTAAGTTGGACAATGATACGGGGTGGATTTCAGTAGCATCCTCCCTGATTTCTGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 90 bp ACAATGTGCTCTACGAGACATTTGCATCAGAATCCCTTGAGGGACTaGTTAAAATATGTTTCAAGAACTTTCATGAAATCTTCTGAAAAG +
Preference number: 6 (lower is better)
Translates to: TMCSTRHLHQNPLRD*LKYVSRTFMKSSEK
Trigger: CTTTTCAGAAGATTTCATGAAAGTTCTTGAAACATATTTTAACAAGTCCCTCAAGGGATTCTGATGCAAATGTCTCGTAGAGCACATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678072.1
CDS GCA 72 bp TGGAAGACTTGCATCCATTATAGAATATCTACTAATTaGATTGATCCCAATGTCTTCATCAGAAGTTGTGAC +
Preference number: 6 (lower is better)
Translates to: WKTCIHYRISTN*IDPNVFIRSCD
Trigger: GTCACAACTTCTGATGAAGACATTGGGATCAATGCAATTAGTAGATATTCTATAATGGATGCAAGTCTTCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp TTCAGGAATATTTCTCTCCACTTTCCCAGCAATTCCTaGATCGGATGTAAAATATACTTTGCCATTCTTAAT +
Preference number: 6 (lower is better)
Translates to: FRNISLHFPSNS*IGCKIYFAILN
Trigger: ATTAAGAATGGCAAAGTATATTTTACATCCGATGCAGGAATTGCTGGGAAAGTGGAGAGAAATATTCCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS TCA 72 bp GAATTCCAGAAACATAAATCTGTCCAGTCTTCTTATTaGTCTGGAAACCCTTCTTTCGACTATTACCAAAAA +
Preference number: 6 (lower is better)
Translates to: EFQKHKSVQSSY*SGNPSFDYYQK
Trigger: TTTTTGGTAATAGTCGAAAGAAGGGTTTCCAGATCAATAAGAAGACTGGACAGATTTATGTTTCTGGAATTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS GCA 72 bp ATCCCCTGTGCTGGGATTAATTGTAAATGGAAGACTTaGATCCATTATAGAATATCTACTAATTGCATTGAT +
Preference number: 6 (lower is better)
Translates to: IPCAGINCKWKT*IHYRISTNCID
Trigger: ATCAATGCAATTAGTAGATATTCTATAATGGATGCAAGTCTTCCATTTACAATTAATCCCAGCACAGGGGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2
CDS CAA 72 bp TATCTCTGTTATATATTCTGTCAACAGACAATACTGTaGCTGTTCCATTTTTCCCAATTAGAAAAGTGTGCC +
Preference number: 6 (lower is better)
Translates to: YLCYIFCQQTIL*LFHFSQLEKCA
Trigger: GGCACACTTTTCTAATTGGGAAAAATGGAACAGCAACAGTATTGTCTGTTGACAGAATATATAACAGAGATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335110.5
ENST00000394329.9
ENST00000674496.2