RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000165323

Ensembl transcript IDs: ENST00000409404.6, ENST00000469900.1, ENST00000489716.1, ENST00000525166.6, ENST00000528921.1, ENST00000533797.1

Found 1666 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCAAAGAAGGAATGGTGGAAGTCAGAGGGTCCATCAGAACCAGGTaGCTCCCATGCTCAAGGCAGTGTAGGGGTGAACAATATGATGTA +
Preference number: 1 (lower is better)
Translates to: SKEGMVEVRGSIRTR*LPCSRQCRGEQYDV
Trigger: TACATCATATTGTTCACCCCTACACTGCCTTGAGCATGGGAGTCACCTGGTTCTGATGGACCCTCTGACTTCCACCATTCCTTCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 90 bp TCATTCCACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTaGTTCCACTTTTCTGTAACAAACAGGGTGAAGTACCCAAGATGT +
Preference number: 1 (lower is better)
Translates to: SFHRQCSTGTEAQPI*FHFSVTNRVKYPRC
Trigger: ACATCTTGGGTACTTCACCCTGTTTGTTACAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGTGGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CCA 90 bp ACCTCAAAGCATGGACCACCTACTCATGTTCCTAAGTCTTTTATATaGCATTTCATGAATAGGCAGGCCAAGGGTACATGGAAAGCTGGC +
Preference number: 1 (lower is better)
Translates to: TSKHGPPTHVPKSFI*HFMNRQAKGTWKAG
Trigger: GCCAGCTTTCCATGTACCCTTGGCCTGCCTATTCATGAAATGCCATATAAAAGACTTAGGAACATGAGTAGGTGGTCCATGCTTTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CCA 90 bp GGAAAAATACAGTATTCCCTTCTCATTCCACAGACAATGCTCCACTaGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTAACAAA +
Preference number: 1 (lower is better)
Translates to: GKIQYSLLIPQTMLH*DRSPANLLPLFCNK
Trigger: TTTGTTACAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGTGGAATGAGAAGGGAATACTGTATTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 90 bp CTAGCTATTCTCAACCTAACCAGAATGTGTGCAATACTAGTAAAGTaGCTACAACAGATTATGGGAAATGGCTTCCAGGAGGTGGCACAT +
Preference number: 1 (lower is better)
Translates to: LAILNLTRMCAILVK*LQQIMGNGFQEVAH
Trigger: ATGTGCCACCTCCTGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATTCTGGTTAGGTTGAGAATAGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR TCA 90 bp GGTACCTACATCAAGGATTACCAGTCACCTCTCAAAAACAATTTCTaGGCCTTTCATTTTCACCCAACTGGAATCAAGCTTGCTTGTTGG +
Preference number: 1 (lower is better)
Translates to: GTYIKDYQSPLKNNF*AFHFHPTGIKLACW
Trigger: CCAACAAGCAAGCTTGATTCCAGTTGGGTGAAAATGAAAGGCTCAGAAATTGTTTTTGAGAGGTGACTGGTAATCCTTGATGTAGGTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 90 bp GACGAGCACCAAGAGTCTAGCTATTCTCAACCTAACCAGAATGTGTaGAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTT +
Preference number: 1 (lower is better)
Translates to: DEHQESSYSQPNQNV*NTSKVPTTDYGKWL
Trigger: AAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATTCTGGTTAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 90 bp CCTGTTTGCAACAGGCAAACGTACAAGACAATCTCTCTGATACAGTaGTTAAAAAGAACTGCTTCCATTTCCAAACACATTTGCCACTCC +
Preference number: 1 (lower is better)
Translates to: PVCNRQTYKTISLIQ*LKRTASISKHICHS
Trigger: GGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTTCTTTTTAAGCACTGTATCAGAGAGATTGTCTTGTACGTTTGCCTGTTGCAAACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR TCA 90 bp GTGAAATTCATTTATTTCAAGATCACAGTGTGGATAATACCTCCATaGGTAGGTCTGACCAAGAGACAGGAAGAGAAAGGCTGGAAAACT +
Preference number: 1 (lower is better)
Translates to: VKFIYFKITVWIIPP*VGLTKRQEEKGWKT
Trigger: AGTTTTCCAGCCTTTCTCTTCCTGTCTCTTGGTCAGACCTACTCATGGAGGTATTATCCACACTGTGATCTTGAAATAAATGAATTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR TCA 90 bp AAACTAGTTCCCTTTCCAGCCTTTCACATTTATTCCCTAATTGGATaGACCTCAAAGCATGGACCACCTACTCATGTTCCTAAGTCTTTT +
Preference number: 1 (lower is better)
Translates to: KLVPFPAFHIYSLIG*TSKHGPPTHVPKSF
Trigger: AAAAGACTTAGGAACATGAGTAGGTGGTCCATGCTTTGAGGTTCATCCAATTAGGGAATAAATGTGAAAGGCTGGAAAGGGAACTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 90 bp GCAAACGTACAAGACAATCTCTCTGATACAGTGCTTAAAAAGAACTaGTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGT +
Preference number: 1 (lower is better)
Translates to: ANVQDNLSDTVLKKN*FHFQTHLPLPKCSS
Trigger: ACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTTCTTTTTAAGCACTGTATCAGAGAGATTGTCTTGTACGTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR TCA 90 bp TTCATTTTCACCCAACTGGAATCAAGCTTGCTTGTTGGGACAGTATaGCTTGTGAAGAAGTTTCTAGTGGAAAAATACAGTATTCCCTTC +
Preference number: 1 (lower is better)
Translates to: FIFTQLESSLLVGTV*LVKKFLVEKYSIPF
Trigger: GAAGGGAATACTGTATTTTTCCACTAGAAACTTCTTCACAAGTCATACTGTCCCAACAAGCAAGCTTGATTCCAGTTGGGTGAAAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CCA 90 bp ATTCAGTTATTTGTTTGCCAGAAGGGTACTACAGTACATACTAATTaGTCCAAACACGCTCCAAATGACTCTACGATTCTCAAGTGCATT +
Preference number: 1 (lower is better)
Translates to: IQLFVCQKGTTVHTN*SKHAPNDSTILKCI
Trigger: AATGCACTTGAGAATCGTAGAGTCATTTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAAATAACTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 90 bp ACATTTCAAACACCAAAACATACATCTTTTACAAACCAGCCTGTTTaGAACAGGCAAACGTACAAGACAATCTCTCTGATACAGTGCTTA +
Preference number: 1 (lower is better)
Translates to: TFQTPKHTSFTNQPV*NRQTYKTISLIQCL
Trigger: TAAGCACTGTATCAGAGAGATTGTCTTGTACGTTTGCCTGTTGCAAACAGGCTGGTTTGTAAAAGATGTATGTTTTGGTGTTTGAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCATTTACCATGGCCACTaGACAGGCGGCCGTAATCTG +
Preference number: 2 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGIYHGH*TGGRNL
Trigger: CAGATTACGGCCGCCTGTGCAGTGGCCATGGTAAAT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACAGACAATGCTCCACTaGGACAGAAGCCCAGCCAAT +
Preference number: 2 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRQTMLH*DRSPAN
Trigger: ATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCCCCCACCCACCAAATaGAACCCAAAAAGCCTCATG +
Preference number: 2 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSPPPTK*NPKSLM
Trigger: CATGAGGCTTTTTGGGTTCCATTTGGTGGGTGGGGG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAGGTGGAGATTGCAGTaGGCTGAGATCATGCCATTG +
Preference number: 2 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGRWRLQ*AEIMPL
Trigger: CAATGGCATGATCTCAGCTCACTGCAATCTCCACCT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAGTGAGCTGAGATCATaGCATTGCACTCTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSELRS*HCTLAW
Trigger: CCAGGCTAGAGTGCAATGGCATGATCTCAGCTCACT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCATTTACCATGGCCACTaGACAGGCGGCCGTAATCTG +
Preference number: 2 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIIYHGH*TGGRNL
Trigger: CAGATTACGGCCGCCTGTGCAGTGGCCATGGTAAAT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCAGACAATGCTCCACTaGGACAGAAGCCCAGCCAAT +
Preference number: 2 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIQTMLH*DRSPAN
Trigger: ATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGGCAGGAGAATCGCTTaGACCCAGGAGGTGGAGATT +
Preference number: 2 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGGRRIA*TQEVEI
Trigger: AATCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGGCAGGAGAATCGCTTaGACCCAGGAGGTGGAGATT +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLGRRIA*TQEVEI
Trigger: AATCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAACGAGGTCAGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLTRSGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCGT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCCTGGGGGCAGGAAATaGCATGTTGGTTTTACTTTG +
Preference number: 2 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGPGGRK*HVGFTL
Trigger: CAAAGTAAAACCAACATGTCATTTCCTGCCCCCAGG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACCCCCACCCACCAAATaGAACCCAAAAAGCCTCATG +
Preference number: 2 (lower is better)
Translates to: LFARRVLQYILIGPNTLQPPPTK*NPKSLM
Trigger: CATGAGGCTTTTTGGGTTCCATTTGGTGGGTGGGGG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGGTCACAGCAAAGGGTaGGCACAATTTTCTTCAGTG +
Preference number: 2 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSGHSKG*AQFSSV
Trigger: CACTGAAGAAAATTGTGCCCACCCTTTGCTGTGACC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAACGAGGTCAGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPTRSGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCGT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGAAGCCCAGCCAATCTaGTTCCACTTTTCTGTAACA +
Preference number: 2 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGEAQPI*FHFSVT
Trigger: TGTTACAGAAAAGTGGAAGCAGATTGGCTGGGCTTC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCATTCCACAGACAATaGTCCACTGGGACAGAAGCC +
Preference number: 2 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSFHRQ*STGTEA
Trigger: GGCTTCTGTCCCAGTGGAGCATTGTCTGTGGAATGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTCCAGGGCACAATACTaGACAAAGCCATACAAGACT +
Preference number: 2 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSRAQY*TKPYKT
Trigger: AGTCTTGTATGGCTTTGTGCAGTATTGTGCCCTGGA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTTGAAAGGTATGCCATaGTCGCCGGCAGAATTTTCA +
Preference number: 2 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGLKGMP*SPAEFS
Trigger: TGAAAATTCTGCCGGCGAGCATGGCATACCTTTCAA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGTGAGCTGAGATCATaGCATTGCACTCTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSELRS*HCTLAW
Trigger: CCAGGCTAGAGTGCAATGGCATGATCTCAGCTCACT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAATTTACCATGGCCACTaGACAGGCGGCCGTAATCTG +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLIYHGH*TGGRNL
Trigger: CAGATTACGGCCGCCTGTGCAGTGGCCATGGTAAAT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGCTGCAGAGCTATTCTaGAGAAAATCAGGGGATGAT +
Preference number: 2 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSAAELF*RKSGDD
Trigger: ATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTGCATATATTTACCATaGCCACTGCACAGGCGGCCG +
Preference number: 2 (lower is better)
Translates to: PGIYLAAELFCRKSGDDICIYLP*PLHRRP
Trigger: CGGCCGCCTGTGCAGTGGCCATGGTAAATATATGCA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCACCTAGTAGCATCTTaGCCTGACTGCAAAGCATTT +
Preference number: 2 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSHLVAS*PDCKAF
Trigger: AAATGCTTTGCAGTCAGGCCAAGATGCTACTAGGTG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACTTCCTCTGTGGGCTTaGGCAAGTCTCTTTCCCACT +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLLPLWA*ASLFPT
Trigger: AGTGGGAAAGAGACTTGCCCAAGCCCACAGAGGAAG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAGGTGGAGATTGCAGTaGGCTGAGATCATGCCATTG +
Preference number: 2 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRRWRLQ*AEIMPL
Trigger: CAATGGCATGATCTCAGCTCACTGCAATCTCCACCT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACCTGGGGGCAGGAAATaGCATGTTGGTTTTACTTTG +
Preference number: 2 (lower is better)
Translates to: LFARRVLQYILIGPNTLQPGGRK*HVGFTL
Trigger: CAAAGTAAAACCAACATGTCATTTCCTGCCCCCAGG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAGAATAATGTGCAGTTaGACACTGTGGGACACAAAC +
Preference number: 2 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGRIMCS*TLWDTN
Trigger: GTTTGTGTCCCACAGTGTTCAACTGCACATTATTCT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATCATTCCACAGACAATaGTCCACTGGGACAGAAGCC +
Preference number: 2 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSFHRQ*STGTEA
Trigger: GGCTTCTGTCCCAGTGGAGCATTGTCTGTGGAATGA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAGTGAGCTGAGATCATaGCATTGCACTCTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSELRS*HCTLAW
Trigger: CCAGGCTAGAGTGCAATGGCATGATCTCAGCTCACT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACAGACAATGCTCCACTaGGACAGAAGCCCAGCCAAT +
Preference number: 2 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPQTMLH*DRSPAN
Trigger: ATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACTTGTTGGGACAGTATaGCTTGTGAAGAAGTTTCTA +
Preference number: 2 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRLVGTV*LVKKFL
Trigger: TAGAAACTTCTTCACAAGTCATACTGTCCCAACAAG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAGGTGGAGATTGCAGTaGGCTGAGATCATGCCATTG +
Preference number: 2 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPRWRLQ*AEIMPL
Trigger: CAATGGCATGATCTCAGCTCACTGCAATCTCCACCT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGAAGCCCAGCCAATCTaGTTCCACTTTTCTGTAACA +
Preference number: 2 (lower is better)
Translates to: LFARRVLQYILIGPNTLQEAQPI*FHFSVT
Trigger: TGTTACAGAAAAGTGGAAGCAGATTGGCTGGGCTTC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTCTCCCTCAAAGAGATaGTGTGTAAGCAGTAGGGAC +
Preference number: 2 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSPSKR*CVSSRD
Trigger: GTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATCTCCCTCAAAGAGATaGTGTGTAAGCAGTAGGGAC +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSPSKR*CVSSRD
Trigger: GTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGCATCTTGGCCTGACTaGAAAGCATTTCATAATCTA +
Preference number: 2 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGASWPD*KAFHNL
Trigger: TAGATTATGAAATGCTTTGCAGTCAGGCCAAGATGC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCATCAAGCTTGCTTGTTaGGACAGTATGACTTGTGAA +
Preference number: 2 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSIKLAC*DSMTCE
Trigger: TTCACAAGTCATACTGTCCCAACAAGCAAGCTTGAT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAAAGCCATACAAGACTaGCTGTATAACTTAGTGGGT +
Preference number: 2 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSKAIQD*LYNLVG
Trigger: ACCCACTAAGTTATACAGCCAGTCTTGTATGGCTTT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCCTACAACAGATTATaGGAAATGGCTTCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLAYNRL*EMASRR
Trigger: CCTCCTGGAAGCCATTTCCCATAATCTGTTGTAGGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCTTGTTGGGACAGTATaGCTTGTGAAGAAGTTTCTA +
Preference number: 2 (lower is better)
Translates to: HSPSKRCCVSSRDSSALILVGTV*LVKKFL
Trigger: TAGAAACTTCTTCACAAGTCATACTGTCCCAACAAG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACATTATGAAGAATTGTaGTTATCTAGGCCGCAAACT +
Preference number: 2 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRHYEEL*LSRPQT
Trigger: AGTTTGCGGCCTAGATAATCACAATTCTTCATAATG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACAAGAGCAGCCTTACTaGGTGCAAGCACATATTTGT +
Preference number: 2 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGQEQPY*VQAHIC
Trigger: ACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACAAGAGCAGCCTTACTaGGTGCAAGCACATATTTGT +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLQEQPY*VQAHIC
Trigger: ACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAAAAATATGTCTGAGTaGATAATGCACAGACTAGGG +
Preference number: 2 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSKNMSE*IMHRLG
Trigger: CCCTAGTCTGTGCATTATTCACTCAGACATATTTTT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATGGATAATACCTCCATaGGTAGGTCTGACCAAGAGA +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLWIIPP*VGLTKR
Trigger: TCTCTTGGTCAGACCTACTCATGGAGGTATTATCCA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATTATATGGCATTTCATaGATAGGCAGGCCAAGGGTA +
Preference number: 2 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLYGIS*IGRPRV
Trigger: TACCCTTGGCCTGCCTATTCATGAAATGCCATATAA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATATTCCCTAATTGGATaGACCTCAAAGCATGGACCA +
Preference number: 2 (lower is better)
Translates to: LFARRVLQYILIGPNTLQYSLIG*TSKHGP
Trigger: TGGTCCATGCTTTGAGGTTCATCCAATTAGGGAATA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATCCAGGGCACAATACTaGACAAAGCCATACAAGACT +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSRAQY*TKPYKT
Trigger: AGTCTTGTATGGCTTTGTGCAGTATTGTGCCCTGGA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAATTACATGCAACAATaGCTCTTTGATTGTTGCCAG +
Preference number: 2 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSNYMQQ*LFDCCQ
Trigger: CTGGCAACAATCAAAGAGGCATTGTTGCATGTAATT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCAGTGGCTTCATGACTaGATTAGGATCTATTTATTC +
Preference number: 2 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGQWLHD*IRIYLF
Trigger: GAATAAATAGATCCTAATGCAGTCATGAAGCCACTG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACACCTAGTAGCATCTTaGCCTGACTGCAAAGCATTT +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLHLVAS*PDCKAF
Trigger: AAATGCTTTGCAGTCAGGCCAAGATGCTACTAGGTG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAATGGCTTCCAGGAGGTaGCACATACATGTTCGAAAA +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLMASRR*HIHVRK
Trigger: TTTTCGAACATGTATGTGCCACCTCCTGGAAGCCAT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCACAGTACATACTAATTaGTCCAAACACGCTCCAAAT +
Preference number: 2 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGTVHTN*SKHAPN
Trigger: ATTTGGAGCGTGTTTGGACCAATTAGTATGTACTGT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACAAGAGCAGCCTTACTaGGTGCAAGCACATATTTGT +
Preference number: 2 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPQEQPY*VQAHIC
Trigger: ACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAAAAATATGTCTGAGTaGATAATGCACAGACTAGGG +
Preference number: 2 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIKNMSE*IMHRLG
Trigger: CCCTAGTCTGTGCATTATTCACTCAGACATATTTTT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAGGCTGGAAAACTTGTaGAGTGTAGTGTATCCACTT +
Preference number: 2 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRRLENL*SVVYPL
Trigger: AAGTGGATACACTACACTTCACAAGTTTTCCAGCCT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCAGGCTGGAAAACTTGTaGAGTGTAGTGTATCCACTT +
Preference number: 2 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIRLENL*SVVYPL
Trigger: AAGTGGATACACTACACTTCACAAGTTTTCCAGCCT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGAAGCCCAGCCAATCTaGTTCCACTTTTCTGTAACA +
Preference number: 2 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPEAQPI*FHFSVT
Trigger: TGTTACAGAAAAGTGGAAGCAGATTGGCTGGGCTTC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCAACTGGAATCAAGCTTaGTTGTTGGGACAGTATGAC +
Preference number: 2 (lower is better)
Translates to: PGIYLAAELFCRKSGDDINWNQA*LLGQYD
Trigger: GTCATACTGTCCCAACAAGCAAGCTTGATTCCAGTT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTGCCTCTTTGATTGTTaGCAGTTTTTAATACTGCAA +
Preference number: 2 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSCLFDC*QFLILQ
Trigger: TTGCAGTATTAAAAACTGGCAACAATCAAAGAGGCA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTGGCTCAAAATTACATaGAACAATGCCTCTTTGATT +
Preference number: 2 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGWLKIT*NNASLI
Trigger: AATCAAAGAGGCATTGTTGCATGTAATTTTGAGCCA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATGGCTCAAAATTACATaGAACAATGCCTCTTTGATT +
Preference number: 2 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRWLKIT*NNASLI
Trigger: AATCAAAGAGGCATTGTTGCATGTAATTTTGAGCCA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTCTACGATTCTCAAGTaGATTCTAAACACTAGAAGA +
Preference number: 2 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSTILK*ILNTRR
Trigger: TCTTCTAGTGTTTAGAATGCACTTGAGAATCGTAGA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCATTTTCACCCAACTaGAATCAAGCTTGCTTGTTG +
Preference number: 2 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSFSPN*NQACLL
Trigger: CAACAAGCAAGCTTGATTCCAGTTGGGTGAAAATGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTTCAGTTTTGAGGACTaGATTGTTATATTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSFSFED*IVIFPV
Trigger: CACTGGAAATATAACAATCCAGTCCTCAAAACTGAA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTGTCATCAGAAACTGTaGACACAGATTTGCTCATTA +
Preference number: 2 (lower is better)
Translates to: HSPSKRCCVSSRDSSALICHQKL*TQICSL
Trigger: TAATGAGCAAATCTGTGTCCACAGTTTCTGATGACA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCTTGTTGGGACAGTATaGCTTGTGAAGAAGTTTCTA +
Preference number: 2 (lower is better)
Translates to: PGIYLAAELFCRKSGDDILVGTV*LVKKFL
Trigger: TAGAAACTTCTTCACAAGTCATACTGTCCCAACAAG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATGTAGAGAAGCTATATaGACAAAGCCAACTTCTGTA +
Preference number: 2 (lower is better)
Translates to: LFARRVLQYILIGPNTLQCREAI*TKPTSV
Trigger: TACAGAAGTTGGCTTTGTTCATATAGCTTCTCTACA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAACTGGAATCAAGCTTaGTTGTTGGGACAGTATGAC +
Preference number: 2 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPNWNQA*LLGQYD
Trigger: GTCATACTGTCCCAACAAGCAAGCTTGATTCCAGTT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAATCAAGCTTGCTTGTTaGGACAGTATGACTTGTGAA +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLIKLAC*DSMTCE
Trigger: TTCACAAGTCATACTGTCCCAACAAGCAAGCTTGAT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAAAGCCATACAAGACTaGCTGTATAACTTAGTGGGT +
Preference number: 2 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRKAIQD*LYNLVG
Trigger: ACCCACTAAGTTATACAGCCAGTCTTGTATGGCTTT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATGTCATCAGAAACTGTaGACACAGATTTGCTCATTA +
Preference number: 2 (lower is better)
Translates to: LFARRVLQYILIGPNTLQCHQKL*TQICSL
Trigger: TAATGAGCAAATCTGTGTCCACAGTTTCTGATGACA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATGTAGAGAAGCTATATaGACAAAGCCAACTTCTGTA +
Preference number: 2 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGCREAI*TKPTSV
Trigger: TACAGAAGTTGGCTTTGTTCATATAGCTTCTCTACA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCATTATGAAGAATTGTaGTTATCTAGGCCGCAAACT +
Preference number: 2 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRHYEEL*LSRPQT
Trigger: AGTTTGCGGCCTAGATAATCACAATTCTTCATAATG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTGCCTCTTTGATTGTTaGCAGTTTTTAATACTGCAA +
Preference number: 2 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRCLFDC*QFLILQ
Trigger: TTGCAGTATTAAAAACTGGCAACAATCAAAGAGGCA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAGCAGCCTTACTGAGTaGAAGCACATATTTGTACAT +
Preference number: 2 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSSLTE*KHIFVH
Trigger: ATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATGGCATAGACTAGAATaGAGCAGCAAAATATTCATA +
Preference number: 2 (lower is better)
Translates to: LFARRVLQYILIGPNTLQWHRLE*SSKIFI
Trigger: TATGAATATTTTGCTGCTGCATTCTAGTCTATGCCA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATCATTTTCACCCAACTaGAATCAAGCTTGCTTGTTG +
Preference number: 2 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSFSPN*NQACLL
Trigger: CAACAAGCAAGCTTGATTCCAGTTGGGTGAAAATGA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CAA 90 bp AACATTTCAAACACCAAAACATACATCTTTTACAAACCAGCCTGTTaGCAACAGGCAAACGTACAAGACAATCTCTCTGATACAGTGCTT +
Preference number: 2 (lower is better)
Translates to: NISNTKTYIFYKPAC*QQANVQDNLSDTVL
Trigger: AAGCACTGTATCAGAGAGATTGTCTTGTACGTTTGCCTGTTGCAAACAGGCTGGTTTGTAAAAGATGTATGTTTTGGTGTTTGAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACATTATGAAGAATTGTaGTTATCTAGGCCGCAAACT +
Preference number: 2 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPHYEEL*LSRPQT
Trigger: AGTTTGCGGCCTAGATAATCACAATTCTTCATAATG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAAAAATATGTCTGAGTaGATAATGCACAGACTAGGG +
Preference number: 2 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPKNMSE*IMHRLG
Trigger: CCCTAGTCTGTGCATTATTCACTCAGACATATTTTT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATGCCTCTTTGATTGTTaGCAGTTTTTAATACTGCAA +
Preference number: 2 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGCLFDC*QFLILQ
Trigger: TTGCAGTATTAAAAACTGGCAACAATCAAAGAGGCA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAATTACATGCAACAATaGCTCTTTGATTGTTGCCAG +
Preference number: 2 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPNYMQQ*LFDCCQ
Trigger: CTGGCAACAATCAAAGAGGCATTGTTGCATGTAATT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCAATTTACACACCAATaGCATATGTCATCAGAAACT +
Preference number: 2 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRQFTHQ*HMSSET
Trigger: AGTTTCTGATGACATATGGCATTGGTGTGTAAATTG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACAATTTACACACCAATaGCATATGTCATCAGAAACT +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLQFTHQ*HMSSET
Trigger: AGTTTCTGATGACATATGGCATTGGTGTGTAAATTG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCAATTTACACACCAATaGCATATGTCATCAGAAACT +
Preference number: 2 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIQFTHQ*HMSSET
Trigger: AGTTTCTGATGACATATGGCATTGGTGTGTAAATTG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACAGTGGCTTCATGACTaGATTAGGATCTATTTATTC +
Preference number: 2 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPQWLHD*IRIYLF
Trigger: GAATAAATAGATCCTAATGCAGTCATGAAGCCACTG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATGGTATATATTTAGCTaGAGAGCTATTCTGCAGAAA +
Preference number: 2 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLWYIFS*RAILQK
Trigger: TTTCTGCAGAATAGCTCTGCAGCTAAATATATACCA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CAA 90 bp AAGGAAAGTCCCTCAACCTGTCAACTTTCAGTTTTGAGGACTGGATaGTTATATTTCCAGTGGAATGATTCTCCTGTTAATTTTGGAAAT +
Preference number: 2 (lower is better)
Translates to: KESPSTCQLSVLRTG*LYFQWNDSPVNFGN
Trigger: ATTTCCAAAATTAACAGGAGAATCATTCCACTGGAAATATAACAATCCAGTCCTCAAAACTGAAAGTTGACAGGTTGAGGGACTTTCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CAA 90 bp TTTACACACCAATGCCATATGTCATCAGAAACTGTGGACACAGATTaGCTCATTAAGCAGATAGTGCAAATATGCATATATTTACCATGG +
Preference number: 2 (lower is better)
Translates to: FTHQCHMSSETVDTD*LIKQIVQICIYLPW
Trigger: CCATGGTAAATATATGCATATTTGCACTATCTGCTTAATGAGCAAATCTGTGTCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR TCA 72 bp GGAATGGTGGAAGTCAGAGGGTCCATCAGAACCAGGTaGCTCCCATGCTCAAGGCAGTGTAGGGGTGAACAA +
Preference number: 3 (lower is better)
Translates to: GMVEVRGSIRTR*LPCSRQCRGEQ
Trigger: TTGTTCACCCCTACACTGCCTTGAGCATGGGAGTCACCTGGTTCTGATGGACCCTCTGACTTCCACCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 72 bp AGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTaGTTCCACTTTTCTGTAACAAACAGGGTGAAGTAC +
Preference number: 3 (lower is better)
Translates to: RQCSTGTEAQPI*FHFSVTNRVKY
Trigger: GTACTTCACCCTGTTTGTTACAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCACTGTGGACACAGATTaGCTCATTAAGCAGATAGTG +
Preference number: 3 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGTVDTD*LIKQIV
Trigger: CACTATCTGCTTAATGAGCAAATCTGTGTCCACAGT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 72 bp ATTACTGTGTCAGTCAGGCATTCTCCCTCAAAGAGATaGTGTGTAAGCAGTAGGGACTCATCAGCATTAATC +
Preference number: 3 (lower is better)
Translates to: ITVSVRHSPSKR*CVSSRDSSALI
Trigger: GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATGCCTGACTGACACAGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATGGAATCAAGCTTGCTaGTTGGGACAGTATGACTTG +
Preference number: 3 (lower is better)
Translates to: LFARRVLQYILIGPNTLQWNQAC*LGQYDL
Trigger: CAAGTCATACTGTCCCAACAAGCAAGCTTGATTCCA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTGGAATCAAGCTTGCTaGTTGGGACAGTATGACTTG +
Preference number: 3 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRWNQAC*LGQYDL
Trigger: CAAGTCATACTGTCCCAACAAGCAAGCTTGATTCCA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCCAAAAAGCCTCATGTaGCTCTTCATTGATACCTTT +
Preference number: 3 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGPKSLM*LFIDTF
Trigger: AAAGGTATCAATGAAGAGCAACATGAGGCTTTTTGG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR TCA 72 bp CTACTCATGTTCCTAAGTCTTTTATATGGCATTTCATaGATAGGCAGGCCAAGGGTACATGGAAAGCTGGCA +
Preference number: 3 (lower is better)
Translates to: LLMFLSLLYGIS*IGRPRVHGKLA
Trigger: TGCCAGCTTTCCATGTACCCTTGGCCTGCCTATTCATGAAATGCCATATAAAAGACTTAGGAACATGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 72 bp CTCAACCTAACCAGAATGTGTGCAATACTAGTAAAGTaGCTACAACAGATTATGGGAAATGGCTTCCAGGAG +
Preference number: 3 (lower is better)
Translates to: LNLTRMCAILVK*LQQIMGNGFQE
Trigger: CTCCTGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATTCTGGTTAGGTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CCA 72 bp AGTTCCCTTTCCAGCCTTTCACATTTATTCCCTAATTaGATGAACCTCAAAGCATGGACCACCTACTCATGT +
Preference number: 3 (lower is better)
Translates to: SSLSSLSHLFPN*MNLKAWTTYSC
Trigger: ACATGAGTAGGTGGTCCATGCTTTGAGGTTCATCCAATTAGGGAATAAATGTGAAAGGCTGGAAAGGGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCCAAAAAGCCTCATGTaGCTCTTCATTGATACCTTT +
Preference number: 3 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIPKSLM*LFIDTF
Trigger: AAAGGTATCAATGAAGAGCAACATGAGGCTTTTTGG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAGTGCAAGCACATATTaGTACATAGGCCCAGACACA +
Preference number: 3 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSASTY*YIGPDT
Trigger: TGTGTCTGGGCCTATGTACAAATATGTGCTTGCACT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAGTGCAAGCACATATTaGTACATAGGCCCAGACACA +
Preference number: 3 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSASTY*YIGPDT
Trigger: TGTGTCTGGGCCTATGTACAAATATGTGCTTGCACT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAATTCAGTTATTTGTTaGCCAGAAGGGTACTACAGT +
Preference number: 3 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGNSVIC*PEGYYS
Trigger: ACTGTAGTACCCTTCTGGCAAACAAATAACTGAATT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 72 bp ATGCACAGACTAGGGACAGTACAATTTACACACCAATaGCATATGTCATCAGAAACTGTGGACACAGATTTG +
Preference number: 3 (lower is better)
Translates to: MHRLGTVQFTHQ*HMSSETVDTDL
Trigger: CAAATCTGTGTCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGTCTGTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 72 bp TGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTaGAGAAAATCAGGGGATGATATCCCAAAGAAAGAG +
Preference number: 3 (lower is better)
Translates to: CLPGIYLAAELF*RKSGDDIPKKE
Trigger: CTCTTTCTTTGGGATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CCA 72 bp TTCCAGGGCACAATACTGCACAAAGCCATACAAGACTaGCTGTATAACTTAGTGGGTGAAATAATTTTTCCC +
Preference number: 3 (lower is better)
Translates to: FQGTILHKAIQD*LYNLVGEIIFP
Trigger: GGGAAAAATTATTTCACCCACTAAGTTATACAGCCAGTCTTGTATGGCTTTGTGCAGTATTGTGCCCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CCA 72 bp TTTGTTTGCCAGAAGGGTACTACAGTACATACTAATTaGTCCAAACACGCTCCAAATGACTCTACGATTCTC +
Preference number: 3 (lower is better)
Translates to: FVCQKGTTVHTN*SKHAPNDSTIL
Trigger: GAGAATCGTAGAGTCATTTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACCAAAAAGCCTCATGTaGCTCTTCATTGATACCTTT +
Preference number: 3 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGPKSLM*LFIDTF
Trigger: AAAGGTATCAATGAAGAGCAACATGAGGCTTTTTGG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAACTGTGGACACAGATTaGCTCATTAAGCAGATAGTG +
Preference number: 3 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPTVDTD*LIKQIV
Trigger: CACTATCTGCTTAATGAGCAAATCTGTGTCCACAGT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR TCA 72 bp ACCCAACTGGAATCAAGCTTGCTTGTTGGGACAGTATaGCTTGTGAAGAAGTTTCTAGTGGAAAAATACAGT +
Preference number: 3 (lower is better)
Translates to: TQLESSLLVGTV*LVKKFLVEKYS
Trigger: ACTGTATTTTTCCACTAGAAACTTCTTCACAAGTCATACTGTCCCAACAAGCAAGCTTGATTCCAGTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 72 bp GTGTGTGTGTGTGTGTGTGTAGTTACCTCAAAAGTTTaGAGACCAACAGCGTGGATGACTTACAATTATATT +
Preference number: 3 (lower is better)
Translates to: VCVCVCVVTSKV*RPTAWMTYNYI
Trigger: AATATAATTGTAAGTCATCCACGCTGTTGGTCTGCAAACTTTTGAGGTAACTACACACACACACACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGTTTTGAGGACTGGATaGTTATATTTCCAGTGGAAT +
Preference number: 3 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRVLRTG*LYFQWN
Trigger: ATTCCACTGGAAATATAACAATCCAGTCCTCAAAAC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGTTTTGAGGACTGGATaGTTATATTTCCAGTGGAAT +
Preference number: 3 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGVLRTG*LYFQWN
Trigger: ATTCCACTGGAAATATAACAATCCAGTCCTCAAAAC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAAAATACCAAAGACTTaGTTCTCGAAAGCAGCCTTA +
Preference number: 3 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRKIPKT*FSKAAL
Trigger: TAAGGCTGCTTTCGAGAACAAAGTCTTTGGTATTTT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 72 bp ACACCAAAACATACATCTTTTACAAACCAGCCTGTTTaGAACAGGCAAACGTACAAGACAATCTCTCTGATA +
Preference number: 3 (lower is better)
Translates to: TPKHTSFTNQPV*NRQTYKTISLI
Trigger: TATCAGAGAGATTGTCTTGTACGTTTGCCTGTTGCAAACAGGCTGGTTTGTAAAAGATGTATGTTTTGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGTTTTGAGGACTGGATaGTTATATTTCCAGTGGAAT +
Preference number: 3 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPVLRTG*LYFQWN
Trigger: ATTCCACTGGAAATATAACAATCCAGTCCTCAAAAC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR TCA 72 bp ATAACAGACACCTTTCCTCTGCATTATGAAGAATTGTaGTTATCTAGGCCGCAAACTTTGAAGGTATCGTTT +
Preference number: 3 (lower is better)
Translates to: ITDTFPLHYEEL*LSRPQTLKVSF
Trigger: AAACGATACCTTCAAAGTTTGCGGCCTAGATAATCACAATTCTTCATAATGCAGAGGAAAGGTGTCTGTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR TCA 72 bp TTCATTGGCTCAAAATTACATGCAACAATGCCTCTTTaGTTGTTGCCAGTTTTTAATACTGCAAGGACTGAT +
Preference number: 3 (lower is better)
Translates to: FIGSKLHATMPL*LLPVFNTARTD
Trigger: ATCAGTCCTTGCAGTATTAAAAACTGGCAACAATCAAAGAGGCATTGTTGCATGTAATTTTGAGCCAATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR TCA 72 bp AAGACATTGTGGATTTTCATCAGAATAATGTGCAGTTaGACACTGTGGGACACAAACCAGCAAAAACATATA +
Preference number: 3 (lower is better)
Translates to: KTLWIFIRIMCS*TLWDTNQQKHI
Trigger: TATATGTTTTTGCTGGTTTGTGTCCCACAGTGTTCAACTGCACATTATTCTGATGAAAATCCACAATGTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR GCA 72 bp ATGCATTTTATTCACCTTTTATTACTCCCAAGTTCTTaGTTACTATATGACGAGCACCAAGAGTCTAGCTAT +
Preference number: 3 (lower is better)
Translates to: MHFIHLLLLPSS*LLYDEHQESSY
Trigger: ATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTGGGAGTAATAAAAGGTGAATAAAATGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR TCA 72 bp AGTGAAGAGCCAATTATCTGGACAATCCATGCAAAATaGACACTAGATCTTCCTGAATTACTTCACATAAAA +
Preference number: 3 (lower is better)
Translates to: SEEPIIWTIHAK*TLDLPELLHIK
Trigger: TTTTATGTGAAGTAATTCAGGAAGATCTAGTGTTCATTTTGCATGGATTGTCCAGATAATTGGCTCTTCACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTGCGGCCGTCCCCACTaGCGCGCAGGTTCCGGAACG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLCGRPH*RAGSGT
Trigger: CGTTCCGGAACCTGCGCGGCAGTGGGGACGGCCGCA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGAAGGCTGGCGAGGCTaGGCTCTCCCACGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLEGWRG*ALPRSR
Trigger: ACGAGAGCGTGGGAGAGCTCAGCCTCGCCAGCCTTC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGCAGGCCAGTGCAGCTaGCCCCGTGCTGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGAGQCS*PRAGTG
Trigger: GCCCGTGCCAGCACGGGGGCAGCTGCACTGGCCTGC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGCCGGGCTGTCAGGATaGGGGGCGACTCAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLAGLSG*GATQGE
Trigger: TTCACCCTGAGTCGCCCCGCATCCTGACAGCCCGGC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGGTGCTCGGCGCTCTTaGTCCGGGCGAGCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSGARRS*SGRAGP
Trigger: GGGACCGGCTCGCCCGGAGCAAGAGCGCCGAGCACC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTGTGGAGGCGGGCCGTaGAGGATTTCTGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLCGGGP*RISVGA
Trigger: GGCGCCCACAGAAATCCTCCACGGCCCGCCTCCACA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGACACGGCGGGGAGGTTaGGGGCCACACTGCACACGA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLTRRGG*GPHCTR
Trigger: TCGTGTGCAGTGTGGCCCCCAACCTCCCCGCCGTGT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCCTCCGCGAAGCTGCTaGGCTTGTTCTGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLPPRSC*ACSAAA
Trigger: TGCCGCTGCAGAACAAGCGCAGCAGCTTCGCGGAGG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCCGATGGCAGGCCAGTaGAGCTGCCCCCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGPMAGQ*SCPRAG
Trigger: GCCAGCACGGGGGCAGCTGCACTGGCCTGCCATCGG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATGCGGCCGTCCCCACTaGCGCGCAGGTTCCGGAACG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRCGRPH*RAGSGT
Trigger: CGTTCCGGAACCTGCGCGGCAGTGGGGACGGCCGCA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGTGGTCATTTCCTGGTaGTCGCCTCCCAGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLVVISW*SPPSPS
Trigger: GGACGGGCTGGGAGGCGAGCACCAGGAAATGACCAC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCCCCGTCAGTGGCCTTaGCCATCAGGCTGTACACGG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLPRQWP*PSGCTR
Trigger: CCGTGTACAGCCTGATGGCCAAGGCCACTGACGGGG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGCGGACACACAAAGCTaGTGCGAGCCGTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLADTQS*CEPCCR
Trigger: CCTACAGCACGGCTCGCATCAGCTTTGTGTGTCCGC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGTCGGAGCGGCAGGGTaGCACGGCGGGGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQVGAAG*HGGEVG
Trigger: CCCAACCTCCCCGCCGTGTCACCCTGCCGCTCCGAC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGCAGGCCAGTGCAGCTaGCCCCGTGCTGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQAGQCS*PRAGTG
Trigger: GCCCGTGCCAGCACGGGGGCAGCTGCACTGGCCTGC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCCGATGGCAGGCCAGTaGAGCTGCCCCCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIPMAGQ*SCPRAG
Trigger: GCCAGCACGGGGGCAGCTGCACTGGCCTGCCATCGG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACCTCCTGGTAGACGTTaGGGCCGTCCCCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRPPGRR*GRPHCR
Trigger: GCGGCAGTGGGGACGGCCGCAACGTCTACCAGGAGG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCCTCCTGGTAGACGTTaGGGCCGTCCCCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGPPGRR*GRPHCR
Trigger: GCGGCAGTGGGGACGGCCGCAACGTCTACCAGGAGG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCAGAGACACGCTGTCTaGTGGGCCTGTGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLQRHAV*WACGLC
Trigger: ACAGAGCCCACAGGCCCAGCAGACAGCGTGTCTCTG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAGGGTGTGTAGGCCATaGGGCGCACGGGGACCTGCG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGRVCRP*GARGPA
Trigger: CGCAGGTCCCCGTGCGCCCCATGGCCTACACACCCT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAGCCATTCTTCCGGATaGAGTCGCAGTCGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLSHSSG*SRSRSG
Trigger: GCCGCTCCGACTGCGACTCCATCCGGAAGAATGGCT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCAGGAGGTCGGCCACTaGAACAGAGGCCTCGCTATA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLQEVGH*NRGLAI
Trigger: TATAGCGAGGCCTCTGTTTCAGTGGCCGACCTCCTG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGTCGGAGCGGCAGGGTaGCACGGCGGGGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRVGAAG*HGGEVG
Trigger: CCCAACCTCCCCGCCGTGTCACCCTGCCGCTCCGAC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCGCGCTAGCCGGGACTaGGGCCGCGAGCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRRASRD*GREQKR
Trigger: GCGCTTCTGCTCGCGGCCTCAGTCCCGGCTAGCGCG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGATGCGCAGGCTGTCCTaGTTCTGGGTGAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLMRRLS*FWVRTA
Trigger: TGCAGTCCTCACCCAGAAGCAGGACAGCCTGCGCAT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCAGTTGGTTGGTGCCTaGCACGGGCTGGATGCTGAT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLQLVGA*HGLDAD
Trigger: ATCAGCATCCAGCCCGTGGCAGGCACCAACCAACTG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGGCACGGGCTGCGCTTaGAGGCGTCGGGATAGAGCA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRGTGCA*RRRDRA
Trigger: TGCTCTATCCCGACGCCTGCAAGCGCAGCCCGTGCC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGGCACGGGCTGCGCTTaGAGGCGTCGGGATAGAGCA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSGTGCA*RRRDRA
Trigger: TGCTCTATCCCGACGCCTGCAAGCGCAGCCCGTGCC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCAGGCCAGTGCAGCTaGCCCCGTGCTGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLAGQCS*PRAGTG
Trigger: GCCCGTGCCAGCACGGGGGCAGCTGCACTGGCCTGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCGAGCAGAAGCGCTCTaGGCTCGGGACGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIRAEAL*ARDAAA
Trigger: GGCGGCGGCGTCCCGAGCGCAGAGCGCTTCTGCTCG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACAGGGGTCCAGTCCCTaGCAGCCCCTGGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRQGSSP*QPLGDS
Trigger: ACTGTCTCCCAGGGGCTGCCAGGGACTGGACCCCTG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAGGCTGTCCTGCTTCTaGGTGAGGACTGCATTCCGC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLRLSCF*VRTAFR
Trigger: GCGGAATGCAGTCCTCACCCAGAAGCAGGACAGCCT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCCACACAAGGATCGTTaGACCCCGGACACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLPHKDR*TPDTVL
Trigger: GAGGACTGTGTCCGGGGTCCAACGATCCTTGTGTGG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGAGTCCAGGCAGCCCTaGAAGCCGCTGAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRESRQP*KPLSTC
Trigger: GCAGGTGCTCAGCGGCTTCCAGGGCTGCCTGGACTC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGAGTCCAGGCAGCCCTaGAAGCCGCTGAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSESRQP*KPLSTC
Trigger: GCAGGTGCTCAGCGGCTTCCAGGGCTGCCTGGACTC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACTGGGCTCAGTGTGCTaGCCAGGGAGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRLGSVC*PGRQAG
Trigger: CCCAGCCTGTCTCCCTGGCCAGCACACTGAGCCCAG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCTGGGCTCAGTGTGCTaGCCAGGGAGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSLGSVC*PGRQAG
Trigger: CCCAGCCTGTCTCCCTGGCCAGCACACTGAGCCCAG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGAGGCGCCTCCCCCGTaGTCTTCTTCACCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGEAPPP*SSSPGA
Trigger: AGCACCGGGTGAAGAAGACCACGGGGGAGGCGCCTC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGGTCCTTCAAGGTACTaGTCCAGCCCGTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLGPSRY*SSPCCC
Trigger: ACAGCAACACGGGCTGGATCAGTACCTTGAAGGACC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCTCTGTCCCAGGTGCTaGGGACGGCTACCACCTCGC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALILCPRC*GRLPPR
Trigger: GCGAGGTGGTAGCCGTCCTCAGCACCTGGGACAGAG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGCCAGCTCCCGTCGTTaGCAGCACGGCCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRASSRR*QHGPRC
Trigger: GCATCTCGGGCCGTGCTGTCAACGACGGGAGCTGGC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCCTCGGTACACTTCCTaGGCGAAGACTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLPRYTS*AKTGAL
Trigger: CAATGCACCAGTCTTCGCGCAGGAAGTGTACCGAGG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGTGCGCCGGAACCCATaGATGTGCAGCCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRVRRNP*MCSPTK
Trigger: CTTCGTGGGGCTGCACATGCATGGGTTCCGGCGCAC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACTTCTGGGTGAGGACTaGATTCCGCAGGGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRLLGED*IPQGAP
Trigger: CGGCGCACCCTGCGGAATGCAGTCCTCACCCAGAAG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCTTCTGGGTGAGGACTaGATTCCGCAGGGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGLLGED*IPQGAP
Trigger: CGGCGCACCCTGCGGAATGCAGTCCTCACCCAGAAG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCTTCTGGGTGAGGACTaGATTCCGCAGGGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSLLGED*IPQGAP
Trigger: CGGCGCACCCTGCGGAATGCAGTCCTCACCCAGAAG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAGATTCCAGGGCCGCTaGCGCAGTCCAGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGRFQGR*RSPAGT
Trigger: GGTTCCAGCTGGACTGCGGCAGCGGCCCTGGAATCT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAAGCCGCTGAGCACCTaGGTGACCCGCGTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGKPLST*VTRVSV
Trigger: GACTGACACGCGGGTCACGCAGGTGCTCAGCGGCTT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCCTCCGCGAAGCTGCTaGGCTTGTTCTGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSPPRSC*ACSAAA
Trigger: TGCCGCTGCAGAACAAGCGCAGCAGCTTCGCGGAGG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCCACCTCCGCGAAGCTaGTGCGCTTGTTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSPPPRS*CACSAA
Trigger: CGCTGCAGAACAAGCGCAGCAGCTTCGCGGAGGTGG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCCGATGGCAGGCCAGTaGAGCTGCCCCCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIPMAGQ*SCPRAG
Trigger: GCCAGCACGGGGGCAGCTGCACTGGCCTGCCATCGG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCCACGTAGCCCGGCGTaGAGTTGCAGAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGPRSPA*SCRGRS
Trigger: GCTCCTTCCTCTGCAACTGCACGCCGGGCTACGTGG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACCTCCTGGTAGACGTTaGGGCCGTCCCCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQPPGRR*GRPHCR
Trigger: GCGGCAGTGGGGACGGCCGCAACGTCTACCAGGAGG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGTGGTCATTTCCTGGTaGTCGCCTCCCAGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRVVISW*SPPSPS
Trigger: GGACGGGCTGGGAGGCGAGCACCAGGAAATGACCAC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCCGGCTCTCCTGTCTaGTCCGAGCTGCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLAGSPV*SELQPP
Trigger: CGGCGGCTGCAGCTCGGAGCAGACAGGAGAGCCGGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCTCTCTGCAGTCAGTTaGGGGCTACCACTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLLSAVS*GLPLSL
Trigger: GAGAGACAGTGGTAGCCCCCAACTGACTGCAGAGAG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCTGCTCACGGTCCAGTaGCTGCTCCAGGATGATGAT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLLLTVQ*LLQDDD
Trigger: ATCATCATCCTGGAGCAGCCACTGGACCGTGAGCAG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGACTGTCCAGGACTCTaGTCAGTGGCCCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGDCPGL*SVARTL
Trigger: CAGCGTGCGGGCCACTGACCAGAGTCCTGGACAGTC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGACTGTCCAGGACTCTaGTCAGTGGCCCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRDCPGL*SVARTL
Trigger: CAGCGTGCGGGCCACTGACCAGAGTCCTGGACAGTC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGTGCCTGCCACGGGCTaGATGCTGATGATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSVPATG*MLMMRR
Trigger: CCTGCGCATCATCAGCATCCAGCCCGTGGCAGGCAC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGGGTGTGTAGGCCATaGGGCGCACGGGGACCTGCG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQRVCRP*GARGPA
Trigger: CGCAGGTCCCCGTGCGCCCCATGGCCTACACACCCT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCACACGGCGGGGAGGTTaGGGGCCACACTGCACACGA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALITRRGG*GPHCTR
Trigger: TCGTGTGCAGTGTGGCCCCCAACCTCCCCGCCGTGT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCGACAGGCGGGCCCCTaGCATCCAATCAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSRQAGP*HPIRGV
Trigger: GACACCTCTGATTGGATGCCAGGGGCCCGCCTGTCG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAGACACGCTGTCTGCTaGGCCTGTGGGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRRHAVC*ACGLCA
Trigger: GGCACAGAGCCCACAGGCCCAGCAGACAGCGTGTCT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCTCTGTCCCAGGTGCTaGGGACGGCTACCACCTCGC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRLCPRC*GRLPPR
Trigger: GCGAGGTGGTAGCCGTCCTCAGCACCTGGGACAGAG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTCGGGGTCCACGGCTTaGACTCTGGTCAACAGAGCC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSSGSTA*TLVNRA
Trigger: GGCTCTGTTGACCAGAGTTCAAGCCGTGGACCCCGA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCCAGCTCCCGTCGTTaGCAGCACGGCCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLASSRR*QHGPRC
Trigger: GCATCTCGGGCCGTGCTGTCAACGACGGGAGCTGGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACCACGGCGATGCCGATaGGCTCCTCCTTCCCCACGT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQPRRCR*APPSPR
Trigger: ACGTGGGGAAGGAGGAGCTCATCGGCATCGCCGTGG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCGGGGCGACTCAGGGTaGAACGTGGTCATTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGRGDSG*NVVISW
Trigger: CCAGGAAATGACCACGTTTCACCCTGAGTCGCCCCG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGAAGGCTGGCGAGGCTaGGCTCTCCCACGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHREGWRG*ALPRSR
Trigger: ACGAGAGCGTGGGAGAGCTCAGCCTCGCCAGCCTTC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACAGCAAGGACTTGGGTaGCAGGGGAGGTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRQQGLG*QGRCPQ
Trigger: CTGAGGACACCTCCCCTGGCACCCAAGTCCTTGCTG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCTGCATTCCGCAGGGTaGGCCGGAACCCATGCATGT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGLHSAG*AGTHAC
Trigger: ACATGCATGGGTTCCGGCGCACCCTGCGGAATGCAG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTGTCCAGTTGGTTGGTaGCTGCCACGGGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGCPVGW*LPRAGC
Trigger: GCATCCAGCCCGTGGCAGGCACCAACCAACTGGACA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATGTCCAGTTGGTTGGTaGCTGCCACGGGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRCPVGW*LPRAGC
Trigger: GCATCCAGCCCGTGGCAGGCACCAACCAACTGGACA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCAGCACGGCCCGAGATaGCCAAGATTCCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRQHGPR*PRFQGR
Trigger: GCGGCCCTGGAATCTTGGGCATCTCGGGCCGTGCTG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAAGCCGCTGAGCACCTaGGTGACCCGCGTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIKPLST*VTRVSV
Trigger: GACTGACACGCGGGTCACGCAGGTGCTCAGCGGCTT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACGTGCTGGCACGGGCTaGGCTTGCAGGCGTCGGGAT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRAGTG*ACRRRD
Trigger: ATCCCGACGCCTGCAAGCGCAGCCCGTGCCAGCACG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCGTGCTGGCACGGGCTaGGCTTGCAGGCGTCGGGAT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIRAGTG*ACRRRD
Trigger: ATCCCGACGCCTGCAAGCGCAGCCCGTGCCAGCACG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACGTGCTGGCACGGGCTaGGCTTGCAGGCGTCGGGAT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLRAGTG*ACRRRD
Trigger: ATCCCGACGCCTGCAAGCGCAGCCCGTGCCAGCACG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGCGGTGGCCGGGTCCTaGACTAGCGTGATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSAVAGS*TSVMLL
Trigger: CAACAACATCACGCTAGTGCAGGACCCGGCCACCGC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGCGGTGGCCGGGTCCTaGACTAGCGTGATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRAVAGS*TSVMLL
Trigger: CAACAACATCACGCTAGTGCAGGACCCGGCCACCGC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTCTCCAGCTCCCGTGTaGTCCCCTGGTGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALISPAPV*SPGVQT
Trigger: GGTCTGCACACCAGGGGAGCACACGGGAGCTGGAGA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAGTCTGGGCTCAGTGTaGTGGCCAGGGAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSLGSV*WPGRQA
Trigger: AGCCTGTCTCCCTGGCCAGCACACTGAGCCCAGACT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCACTGGGGCCTTCTCCTaGAGTCTGGGCTCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSTGAFS*SLGSVC
Trigger: GCACACTGAGCCCAGACTGCAGGAGAAGGCCCCAGT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGGCCTGTGGGCTCTGTaGCCTGGTTCATGCTCACAG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSGLWAL*PGSCSQ
Trigger: CTGTGAGCATGAACCAGGGCACAGAGCCCACAGGCC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCAGAGACACGCTGTCTaGTGGGCCTGTGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGQRHAV*WACGLC
Trigger: ACAGAGCCCACAGGCCCAGCAGACAGCGTGTCTCTG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGTTCACAGCGCAGCCTaGGGGGAGGAGCGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPVHSAA*GEERRL
Trigger: GAGCCGGCGCTCCTCCCCGCAGGCTGCGCTGTGAAC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCCCCAGTCCAAGATCTaGATCATGGGTCTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLPQSKI*IMGLKP
Trigger: TGGCTTGAGACCCATGATCCAGATCTTGGACTGGGG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAGTGGAAAGCTGGGCTaGTTTCACGGTCAAGGCGTT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLSGKLG*FHGQGV
Trigger: AACGCCTTGACCGTGAAACCAGCCCAGCTTTCCACT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCAGAGACCAAGGCCGTaGAGGAAAGAGAGAATGCCT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLQRPRP*RKERMP
Trigger: AGGCATTCTCTCTTTCCTCCACGGCCTTGGTCTCTG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAGGTGGATGTTGGACTaGCAGAACCTGCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRRWMLD*QNLPPP
Trigger: CGGGGGTGGCAGGTTCTGCCAGTCCAACATCCACCT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAAATTTCCAGGGGAATaGCTGTGGGCTTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLKFPGE*LWACGC
Trigger: GCACCCACAAGCCCACAGCCATTCCCCTGGAAATTT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGTGCCTGCCACGGGCTaGATGCTGATGATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIVPATG*MLMMRR
Trigger: CCTGCGCATCATCAGCATCCAGCCCGTGGCAGGCAC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGAGTCCAGGCAGCCCTaGAAGCCGCTGAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRESRQP*KPLSTC
Trigger: GCAGGTGCTCAGCGGCTTCCAGGGCTGCCTGGACTC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGGCCAGCCTGGATATTaGGTACCACCACGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIGQPGY*VPPRGA
Trigger: TGCGCCCCGTGGTGGTACCCAATATCCAGGCTGGCC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTATCCAGGTTGCTCCTaGAGTCACTCTGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLYPGCS*SHSGSR
Trigger: CCTGCTTCCAGAGTGACTCCAGGAGCAACCTGGATA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAACGTGGTCATTTCCTaGTGCTCGCCTCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSNVVIS*CSPPSP
Trigger: CGGGCTGGGAGGCGAGCACCAGGAAATGACCACGTT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTCCCGTGTGCTCCCCTaGTGTGCAGACCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALISRVLP*CADPPS
Trigger: GGATGGAGGGTCTGCACACCAGGGGAGCACACGGGA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGGCAGGGCCTCATATTaGTCTGGGAAGTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGGRASY*SGKSSG
Trigger: CCCGGAGGACTTCCCAGACCAATATGAGGCCCTGCC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCAGACAATGCTCCACTaGGACAGAAGCCCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLQTMLH*DRSPAN
Trigger: ATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCAGCCTGGATCTGAATaGCAGATACGTCCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLQPGSE*QIRPLE
Trigger: CTCCAAAGGACGTATCTGTCATTCAGATCCAGGCTG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCCTCCACATTCACAATaGCTCGGGCCAAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLPPHSQ*LGPSFF
Trigger: GAAGAAACTTGGCCCGAGTCATTGTGAATGTGGAGG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCTGAGACTGGGTGAATaGTGGCAAGAACGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLLRLGE*WQERFR
Trigger: CCTGAAACGTTCTTGCCATCATTCACCCAGTCTCAG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACAGTGGCCCGCACGCTaGTGTTGTACGAAGACTGCT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRQWPAR*CCTKTA
Trigger: AGCAGTCTTCGTACAACATCAGCGTGCGGGCCACTG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCCGTGCTGTAGGTCATaGGCGCGTGGGAATCGAGTG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIPCCRS*ARGNRV
Trigger: CACTCGATTCCCACGCGCTCATGACCTACAGCACGG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGCGGACACACAAAGCTaGTGCGAGCCGTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIADTQS*CEPCCR
Trigger: CCTACAGCACGGCTCGCATCAGCTTTGTGTGTCCGC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGCCAGCTCCCGTCGTTaGCAGCACGGCCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPASSRR*QHGPRC
Trigger: GCATCTCGGGCCGTGCTGTCAACGACGGGAGCTGGC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCCACGGCGATGCCGATaGGCTCCTCCTTCCCCACGT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRPRRCR*APPSPR
Trigger: ACGTGGGGAAGGAGGAGCTCATCGGCATCGCCGTGG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACCACGGCGATGCCGATaGGCTCCTCCTTCCCCACGT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLPRRCR*APPSPR
Trigger: ACGTGGGGAAGGAGGAGCTCATCGGCATCGCCGTGG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGAAGGCTGGCGAGGCTaGGCTCTCCCACGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGEGWRG*ALPRSR
Trigger: ACGAGAGCGTGGGAGAGCTCAGCCTCGCCAGCCTTC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCCTAATATGCACCTGTaGAGTGCTGGTGAACAACCC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLPNMHL*SAGEQP
Trigger: GGGTTGTTCACCAGCACTGCACAGGTGCATATTAGG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCTGCATTCCGCAGGGTaGGCCGGAACCCATGCATGT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALILHSAG*AGTHAC
Trigger: ACATGCATGGGTTCCGGCGCACCCTGCGGAATGCAG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCATGCGCAGGCTGTCCTaGTTCTGGGTGAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSMRRLS*FWVRTA
Trigger: TGCAGTCCTCACCCAGAAGCAGGACAGCCTGCGCAT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCAGTTGGTTGGTGCCTaGCACGGGCTGGATGCTGAT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSQLVGA*HGLDAD
Trigger: ATCAGCATCCAGCCCGTGGCAGGCACCAACCAACTG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAGATTCCAGGGCCGCTaGCGCAGTCCAGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRRFQGR*RSPAGT
Trigger: GGTTCCAGCTGGACTGCGGCAGCGGCCCTGGAATCT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCAGCACGGCCCGAGATaGCCAAGATTCCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIQHGPR*PRFQGR
Trigger: GCGGCCCTGGAATCTTGGGCATCTCGGGCCGTGCTG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATCCAGGAAGACCGAGTaGCAGCTCCCGTCGTTGACA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRSRKTE*QLPSLT
Trigger: TGTCAACGACGGGAGCTGGCACTCGGTCTTCCTGGA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGGGCGCCGAAGTAGATaGTACTCTCAGTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGGRRSR*YSQCSA
Trigger: CGCTGAGCACTGAGAGTAGCATCTACTTCGGCGCCC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCACCTCCGCGAAGCTaGTGCGCTTGTTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRPPPRS*CACSAA
Trigger: CGCTGCAGAACAAGCGCAGCAGCTTCGCGGAGGTGG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGGCACGGGCTGCGCTTaGAGGCGTCGGGATAGAGCA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGGTGCA*RRRDRA
Trigger: TGCTCTATCCCGACGCCTGCAAGCGCAGCCCGTGCC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAGCCCGGCGTGCAGTTaGAGAGGAAGGAGCCGAACA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALISPACS*RGRSRT
Trigger: TGTTCGGCTCCTTCCTCTGCAACTGCACGCCGGGCT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGTGGTCATTTCCTGGTaGTCGCCTCCCAGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQVVISW*SPPSPS
Trigger: GGACGGGCTGGGAGGCGAGCACCAGGAAATGACCAC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCCGGGCTGTCAGGATaGGGGGCGACTCAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLAGLSG*GATQGE
Trigger: TTCACCCTGAGTCGCCCCGCATCCTGACAGCCCGGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCAGGGGTCCAGTCCCTaGCAGCCCCTGGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRQGSSP*QPLGDS
Trigger: ACTGTCTCCCAGGGGCTGCCAGGGACTGGACCCCTG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCGTGGAGGATTTCTGTaGGCGCCCATTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSRGGFL*APIVHC
Trigger: GCAGTGGACAATGGGCGCCCACAGAAATCCTCCACG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTGTGGAGGCGGGCCGTaGAGGATTTCTGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDICGGGP*RISVGA
Trigger: GGCGCCCACAGAAATCCTCCACGGCCCGCCTCCACA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCAGAGGGGTGTTAGCTaGCTGCACAGACACCACCCC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIQRGVS*LHRHHP
Trigger: GGGGTGGTGTCTGTGCAGCCAGCTAACACCCCTCTG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATTGTCCTGGGCCTCATaGTCCAGCCTCTCGGCAGTA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRLSWAS*SSLSAV
Trigger: TACTGCCGAGAGGCTGGACCATGAGGCCCAGGACAA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAAGCTTTGTGTAAAGTaGAGGCCGCTGTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLKLCVK*RPLSMA
Trigger: AGCCATGGACAGCGGCCTCCACTTTACACAAAGCTT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGGTCCAGCTCACGGCTaGCTTCTACCACCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGGPAHG*LLPPAH
Trigger: ATGAGCTGGTGGTAGAAGCCAGCCGTGAGCTGGACC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACCCCGTCAGTGGCCTTaGCCATCAGGCTGTACACGG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQPRQWP*PSGCTR
Trigger: CCGTGTACAGCCTGATGGCCAAGGCCACTGACGGGG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATGCCACCCCCGTCAGTaGCCTTGGCCATCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQCHPRQ*PWPSGC
Trigger: ACAGCCTGATGGCCAAGGCCACTGACGGGGGTGGCA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAGAGACTCTGTGTGCTaGAAGACCACAGCCGACCGC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGRDSVC*KTTADR
Trigger: GCGGTCGGCTGTGGTCTTCCAGCACACAGAGTCTCT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGATGGCTGTGGGCTTGTaGGTGCTTTCCTCAATGACT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLMAVGL*VLSSMT
Trigger: AGTCATTGAGGAAAGCACCCACAAGCCCACAGCCAT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGTGCCTGCCACGGGCTaGATGCTGATGATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRVPATG*MLMMRR
Trigger: CCTGCGCATCATCAGCATCCAGCCCGTGGCAGGCAC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCTCTCCGAGCTTCCCTaGTGGACACTGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGLSELP*WTLAEE
Trigger: TTCCTCTGCCAGTGTCCACCAGGGAAGCTCGGAGAG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGGCCAGCCTGGATATTaGGTACCACCACGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQGQPGY*VPPRGA
Trigger: TGCGCCCCGTGGTGGTACCCAATATCCAGGCTGGCC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAGGGTGTGTAGGCCATaGGGCGCACGGGGACCTGCG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPRVCRP*GARGPA
Trigger: CGCAGGTCCCCGTGCGCCCCATGGCCTACACACCCT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAACACGGCGGGGAGGTTaGGGGCCACACTGCACACGA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLTRRGG*GPHCTR
Trigger: TCGTGTGCAGTGTGGCCCCCAACCTCCCCGCCGTGT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATCCCGTGTGCTCCCCTaGTGTGCAGACCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSRVLP*CADPPS
Trigger: GGATGGAGGGTCTGCACACCAGGGGAGCACACGGGA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCTGGGCTCAGTGTGCTaGCCAGGGAGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRLGSVC*PGRQAG
Trigger: CCCAGCCTGTCTCCCTGGCCAGCACACTGAGCCCAG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGACACGCTGTCTGCTaGGCCTGTGGGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQRHAVC*ACGLCA
Trigger: GGCACAGAGCCCACAGGCCCAGCAGACAGCGTGTCT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGACCACTGCCATCCCTaGTGGAGTACTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSDHCHP*WSTGSL
Trigger: GAGAGATCCAGTACTCCATCAGGGATGGCAGTGGTC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGGTCCTTCAAGGTACTaGTCCAGCCCGTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSGPSRY*SSPCCC
Trigger: ACAGCAACACGGGCTGGATCAGTACCTTGAAGGACC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCCACCACAGAGAAGGTaGATGTGGGGTCTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSPPQRR*MWGLSR
Trigger: ACGAGACAGACCCCACATTCACCTTCTCTGTGGTGG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGAAGACCCCACCAGCTaGGTCTGCCAGGGAGTACAC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHREDPTS*VCQGVH
Trigger: GTGTACTCCCTGGCAGACTCAGCTGGTGGGGTCTTC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTCACAATGCTGTTCCTaGCAGTCCAGCCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSQCCS*QSSPEQ
Trigger: CTGCTCAGGGCTGGACTGTCAGGAACAGCATTGTGA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCGCGTGGGAATCGAGTaGCAAGCCTTGCTCACAATG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGRVGIE*QALLTM
Trigger: CATTGTGAGCAAGGCTTGTCACTCGATTCCCACGCG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGGTCCTGCACTAGCGTaGTGTTGTTGCGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGGPALA*CCCGSS
Trigger: ACTACTCCCGCAACAACATCACGCTAGTGCAGGACC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTCGTTGGGGAATGGGTaGGGAGGGAGATACTGGCTA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSSLGNG*GGRYWL
Trigger: TAGCCAGTATCTCCCTCCTCACCCATTCCCCAACGA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGGCAGGAGAATCGCTTaGACCCAGGAGGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSGRRIA*TQEVEI
Trigger: AATCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCCTGGGGGCAGGAAATaGCATGTTGGTTTTACTTTG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLPGGRK*HVGFTL
Trigger: CAAAGTAAAACCAACATGTCATTTCCTGCCCCCAGG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGGGAAGGCAGCGGAGTaGAGAGCCAATTATCTGGAC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRGKAAE*RANYLD
Trigger: GTCCAGATAATTGGCTCTTCACTCCGCTGCCTTCCC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAGTATTCAGTGGCCGTaGTGTAACAATCAGACCCGA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLSIQWP*CNNQTR
Trigger: TCGGGTCTGATTGTTACAGCACGGCCACTGAATACT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCCTCGGTACACTTCCTaGGCGAAGACTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSPRYTS*AKTGAL
Trigger: CAATGCACCAGTCTTCGCGCAGGAAGTGTACCGAGG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATGGACTGGCAGAACCTaGCACCCCCGTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGWTGRT*HPRQWP
Trigger: AGGCCACTGACGGGGGTGGCAGGTTCTGCCAGTCCA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTGGACTGGCAGAACCTaGCACCCCCGTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRWTGRT*HPRQWP
Trigger: AGGCCACTGACGGGGGTGGCAGGTTCTGCCAGTCCA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTCACGGTCCAGTGGCTaGTCCAGGATGATGATGCCA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSSRSSG*SRMMMP
Trigger: TGGCATCATCATCCTGGAGCAGCCACTGGACCGTGA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTCTGTCACCACCAGCTaGAAGATGCTGGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSVTTS*KMLVPT
Trigger: AGTGGGCACCAGCATCTTGCAGCTGGTGGTGACAGA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAAACTTGCTGGGGTTTaGCTGAATCCTTTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLKLAGV*LNPLPG
Trigger: TCCAGGCAAAGGATTCAGGCAAACCCCAGCAAGTTT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATGTCCAGTTGGTTGGTaGCTGCCACGGGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQCPVGW*LPRAGC
Trigger: GCATCCAGCCCGTGGCAGGCACCAACCAACTGGACA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGACACAGTCCTCCATTaGAGGTGCAACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGDTVLH*RCNARS
Trigger: GGAACGTGCGTTGCACCTGCAATGGAGGACTGTGTC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACAGCACGGCCCGAGATaGCCAAGATTCCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPQHGPR*PRFQGR
Trigger: GCGGCCCTGGAATCTTGGGCATCTCGGGCCGTGCTG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGCGTGTCAGTCAGGCTaGGGATGTTATCCGCTTGCA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGACQSG*GCYPLA
Trigger: TGCAAGCGGATAACATCCGCAGCCTGACTGACACGC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAAGCCGCTGAGCACCTaGGTGACCCGCGTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGKPLST*VTRVSV
Trigger: GACTGACACGCGGGTCACGCAGGTGCTCAGCGGCTT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCCTCCGCGAAGCTGCTaGGCTTGTTCTGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRPPRSC*ACSAAA
Trigger: TGCCGCTGCAGAACAAGCGCAGCAGCTTCGCGGAGG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACCACCTCCGCGAAGCTaGTGCGCTTGTTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGPPPRS*CACSAA
Trigger: CGCTGCAGAACAAGCGCAGCAGCTTCGCGGAGGTGG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGCCCGGCGTGCAGTTaGAGAGGAAGGAGCCGAACA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSPACS*RGRSRT
Trigger: TGTTCGGCTCCTTCCTCTGCAACTGCACGCCGGGCT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACCACGTAGCCCGGCGTaGAGTTGCAGAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLPRSPA*SCRGRS
Trigger: GCTCCTTCCTCTGCAACTGCACGCCGGGCTACGTGG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACCACGTAGCCCGGCGTaGAGTTGCAGAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGPRSPA*SCRGRS
Trigger: GCTCCTTCCTCTGCAACTGCACGCCGGGCTACGTGG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATCTCCAGCTCCCGTGTaGTCCCCTGGTGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSPAPV*SPGVQT
Trigger: GGTCTGCACACCAGGGGAGCACACGGGAGCTGGAGA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTCTCCAGCTCCCGTGTaGTCCCCTGGTGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDISPAPV*SPGVQT
Trigger: GGTCTGCACACCAGGGGAGCACACGGGAGCTGGAGA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAGTCTGGGCTCAGTGTaGTGGCCAGGGAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSLGSV*WPGRQA
Trigger: AGCCTGTCTCCCTGGCCAGCACACTGAGCCCAGACT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGACTGGGGCCTTCTCCTaGAGTCTGGGCTCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRTGAFS*SLGSVC
Trigger: GCACACTGAGCCCAGACTGCAGGAGAAGGCCCCAGT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGGCCTGTGGGCTCTGTaGCCTGGTTCATGCTCACAG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRGLWAL*PGSCSQ
Trigger: CTGTGAGCATGAACCAGGGCACAGAGCCCACAGGCC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGTCTTCTTCACCCGGTaGTCGGCGCTCTTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGVFFTR*SALLLR
Trigger: CCGGAGCAAGAGCGCCGAGCACCGGGTGAAGAAGAC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCATACTTCCATCCCTTaGCTCCGCTGGCGATCCACG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIHTSIP*LRWRST
Trigger: CGTGGATCGCCAGCGGAGGCAAGGGATGGAAGTATG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGTCCCTGGCAGCCCCTaGGAGACAGTGGCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGVPGSP*ETVAKS
Trigger: GCTTTTGGCCACTGTCTCCCAGGGGCTGCCAGGGAC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCGTGGAGGATTTCTGTaGGCGCCCATTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIRGGFL*APIVHC
Trigger: GCAGTGGACAATGGGCGCCCACAGAAATCCTCCACG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCTCTCTGCAGTCAGTTaGGGGCTACCACTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGLSAVS*GLPLSL
Trigger: GAGAGACAGTGGTAGCCCCCAACTGACTGCAGAGAG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACTGGCCACACGCAGATaGTCCAGCTCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLLATRR*SSSRLA
Trigger: AGCCAGCCGTGAGCTGGACCATCTGCGTGTGGCCAG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACTGGCCACACGCAGATaGTCCAGCTCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGLATRR*SSSRLA
Trigger: AGCCAGCCGTGAGCTGGACCATCTGCGTGTGGCCAG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCCACTGTACTCCCAATaGCTGTATCTTCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLPLYSQ*LYLLQW
Trigger: CCATTGCAGAAGATACAGCCATTGGGAGTACAGTGG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTACCACCTCGCCCGGTaGGTCGCTCTCCTTCACATT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIYHLAR*VALLHI
Trigger: AATGTGAAGGAGAGCGACCCACCGGGCGAGGTGGTA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAGGTGGATGTTGGACTaGCAGAACCTGCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRRWMLD*QNLPPP
Trigger: CGGGGGTGGCAGGTTCTGCCAGTCCAACATCCACCT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACTGCTCACGGTCCAGTaGCTGCTCCAGGATGATGAT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRLLTVQ*LLQDDD
Trigger: ATCATCATCCTGGAGCAGCCACTGGACCGTGAGCAG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCACAGCGCTGAGAGCTaGGGTGCCCCCATCTTTGGC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRHSAES*GAPIFG
Trigger: GCCAAAGATGGGGGCACCCCAGCTCTCAGCGCTGTG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAACACTGCATGTCCCCTaGACACGGCTTCTCCACACA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRTLHVP*TRLLHT
Trigger: TGTGTGGAGAAGCCGTGTCCAGGGGACATGCAGTGT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTTCCCTGGTGGACACTaGCAGAGGAACGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIFPGGH*QRNGLL
Trigger: CAGGAGACCGTTCCTCTGCCAGTGTCCACCAGGGAA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCTCTCCGAGCTTCCCTaGTGGACACTGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALILSELP*WTLAEE
Trigger: TTCCTCTGCCAGTGTCCACCAGGGAAGCTCGGAGAG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCTGCCGCAGTCCAGCTaGAACCACAGCTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRLPQSS*NHSLPS
Trigger: GGATGGCAAGCTGTGGTTCCAGCTGGACTGCGGCAG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACTGCCGCAGTCCAGCTaGAACCACAGCTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLPQSS*NHSLPS
Trigger: GGATGGCAAGCTGTGGTTCCAGCTGGACTGCGGCAG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGCCAGCCTGGATATTaGGTACCACCACGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRGQPGY*VPPRGA
Trigger: TGCGCCCCGTGGTGGTACCCAATATCCAGGCTGGCC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAACGTGGTCATTTCCTaGTGCTCGCCTCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRNVVIS*CSPPSP
Trigger: CGGGCTGGGAGGCGAGCACCAGGAAATGACCACGTT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACGACAGGCGGGCCCCTaGCATCCAATCAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRQAGP*HPIRGV
Trigger: GACACCTCTGATTGGATGCCAGGGGCCCGCCTGTCG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCGACAGGCGGGCCCCTaGCATCCAATCAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRRQAGP*HPIRGV
Trigger: GACACCTCTGATTGGATGCCAGGGGCCCGCCTGTCG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCTCTTCATGAGGGGGTaGGTATTCACTGTCAATGTC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLLFMRG*VFTVNV
Trigger: GACATTGACAGTGAATACCCACCCCCTCATGAAGAG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGACACGCTGTCTGCTaGGCCTGTGGGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRHAVC*ACGLCA
Trigger: GGCACAGAGCCCACAGGCCCAGCAGACAGCGTGTCT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACGTCAAAGCCGCAGTTaGCAGACACATCCGAGGATG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRRQSRS*QTHPRM
Trigger: CATCCTCGGATGTGTCTGCCAACTGCGGCTTTGACG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCGTCAAAGCCGCAGTTaGCAGACACATCCGAGGATG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGRQSRS*QTHPRM
Trigger: CATCCTCGGATGTGTCTGCCAACTGCGGCTTTGACG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCCAAAGAAGGAATGGTaGAAGTCAGAGGGTCCATCA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLPKKEW*KSEGPS
Trigger: TGATGGACCCTCTGACTTCCACCATTCCTTCTTTGG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGCCTACAACAGATTATaGGAAATGGCTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLAYNRL*EMASRR
Trigger: CCTCCTGGAAGCCATTTCCCATAATCTGTTGTAGGC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGGGTACATGGAAAGCTaGCATAGACTAGAATGCAGC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLGYMES*HRLECS
Trigger: GCTGCATTCTAGTCTATGCCAGCTTTCCATGTACCC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGCAATACCTGTGCACTaGGAAGGCAGCGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSAIPVH*EGSGVK
Trigger: CTTCACTCCGCTGCCTTCCCAGTGCACAGGTATTGC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGTAGGTCCTTGCTGCTaGGTTCTCATACACGGTAGC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSVGPCC*VLIHGS
Trigger: GCTACCGTGTATGAGAACTCAGCAGCAAGGACCTAC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCACCACCCAAATGGTTaGCTGTTTTGGAGAGGGACC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGHHPNG*LFWRGT
Trigger: GGTCCCTCTCCAAAACAGTCAACCATTTGGGTGGTG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCACTTGCAGAACAGCTaGTCCCAGAGCAGCAGATTC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSHLQNS*SQSSRF
Trigger: GAATCTGCTGCTCTGGGATCAGCTGTTCTGCAAGTG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGGGACTCCAGTCGTCTaGATGACCCCTGAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIGTPVV*MTPEVD
Trigger: ATCTACCTCAGGGGTCATTCAGACGACTGGAGTCCC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTGGCTTGAACTTGAGTaGCCAAGTGGCCCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGWLELE*PSGPFQ
Trigger: TTGGAAGGGGCCACTTGGTCACTCAAGTTCAAGCCA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGTGGGGTCTGTCTCGTaGTCTAGGTCCTTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGVGSVS*SRSFKV
Trigger: TACCTTGAAGGACCTAGATCACGAGACAGACCCCAC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTCGGGGTCCACGGCTTaGACTCTGGTCAACAGAGCC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSGSTA*TLVNRA
Trigger: GGCTCTGTTGACCAGAGTTCAAGCCGTGGACCCCGA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGAAGACCCCACCAGCTaGGTCTGCCAGGGAGTACAC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIREDPTS*VCQGVH
Trigger: GTGTACTCCCTGGCAGACTCAGCTGGTGGGGTCTTC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAAGGGAGGCCCATTGTaGAAGGAGTCTCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSKGGPL*KESLSV
Trigger: GACAGACAGAGACTCCTTTCACAATGGGCCTCCCTT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAAGGGAGGCCCATTGTaGAAGGAGTCTCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRKGGPL*KESLSV
Trigger: GACAGACAGAGACTCCTTTCACAATGGGCCTCCCTT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATTGCTGGGGTTTGCCTaGATCCTTTGCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRLLGFA*ILCLDT
Trigger: TGTGTCCAGGCAAAGGATTCAGGCAAACCCCAGCAA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCCGTGCTGTAGGTCATaGGCGCGTGGGAATCGAGTG +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRPCCRS*ARGNRV
Trigger: CACTCGATTCCCACGCGCTCATGACCTACAGCACGG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCGGACACACAAAGCTaGTGCGAGCCGTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLADTQS*CEPCCR
Trigger: CCTACAGCACGGCTCGCATCAGCTTTGTGTGTCCGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCGGGGCGACTCAGGGTaGAACGTGGTCATTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIRGDSG*NVVISW
Trigger: CCAGGAAATGACCACGTTTCACCCTGAGTCGCCCCG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACGGGGCGACTCAGGGTaGAACGTGGTCATTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRGDSG*NVVISW
Trigger: CCAGGAAATGACCACGTTTCACCCTGAGTCGCCCCG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAGACACATCCGAGGATaGGGTGCCTCTGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRRHIRG*GASGIV
Trigger: CACAATTCCAGAGGCACCTCATCCTCGGATGTGTCT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCAAGAGCAGCCTTACTaGGTGCAAGCACATATTTGT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLQEQPY*VQAHIC
Trigger: ACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCAAACACGCTCCAAATaGCTCTACGATTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLQTRSK*LYDSQV
Trigger: CACTTGAGAATCGTAGAGTCATTTGGAGCGTGTTTG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGATAAGGTTTGGTGTGTaGTGTGTGTGCAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLIRFGV*CVCKLR
Trigger: CCTCAACTTGCACACACATCACACACCAAACCTTAT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGATTGGAACCAATATCTaGGTCTGTTGCAGTCACCTG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLIGTNI*VCCSHL
Trigger: CAGGTGACTGCAACAGACGCAGATATTGGTTCCAAT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCTGCTGACCACTCTCTaGCTTGTCCCTGGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGLLTTL*LVPGFY
Trigger: ATAGAAGCCAGGGACAAGGCAGAGAGTGGTCAGCAG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGCACGCTTGTTCCAATaGGTGAGTTTTCCTTTACAG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLARLFQ*VSFPLQ
Trigger: CTGTAAAGGAAAACTCACGCATTGGAACAAGCGTGC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCCGATCAAGAATGTCTaGGGCAGTGATGACCCCACT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGPIKNV*GSDDPT
Trigger: AGTGGGGTCATCACTGCCGCAGACATTCTTGATCGG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCTCCAGAAAATGTTCTaGCTGCTGTTCTCGATCCAA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLLQKMF*LLFSIQ
Trigger: TTGGATCGAGAACAGCAGGCAGAACATTTTCTGGAG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTCCAGAGCCGTCACTTaGAGAACAGCTGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSRAVT*RTADPR
Trigger: TCTGGGATCAGCTGTTCTGCAAGTGACGGCTCTGGA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTTCAACGGGACTCTCTaGAGTCAGTTGGGGGCTACC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIFNGTL*SQLGAT
Trigger: GGTAGCCCCCAACTGACTGCAGAGAGTCCCGTTGAA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAGAGGCTCCATCCGCTaGTTCCGATGGTTGGACAAT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRRGSIR*FRWLDN
Trigger: ATTGTCCAACCATCGGAAGCAGCGGATGGAGCCTCT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCACAGGAATGAGGGAGTaGTTTACTGGGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGTGMRE*FTGMPP
Trigger: TGGGGGCATCCCAGTAAAGCACTCCCTCATTCCTGT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGGAGGAAAGAGAGAATaGCTCTCCAAGGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGGGKRE*LSKVRG
Trigger: GCCTCTGACCTTGGAGAGGCATTCTCTCTTTCCTCC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGGAGGAAAGAGAGAATaGCTCTCCAAGGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRGGKRE*LSKVRG
Trigger: GCCTCTGACCTTGGAGAGGCATTCTCTCTTTCCTCC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTCACGGTCCAGTGGCTaGTCCAGGATGATGATGCCA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALISRSSG*SRMMMP
Trigger: TGGCATCATCATCCTGGAGCAGCCACTGGACCGTGA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTTGTACGAAGACTGCTaGTCACGGTCCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALILYEDC*SRSSGC
Trigger: GCAGCCACTGGACCGTGAGCAGCAGTCTTCGTACAA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAATGTTGTACGAAGACTaGTGCTCACGGTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRMLYED*CSRSSG
Trigger: GCCACTGGACCGTGAGCAGCAGTCTTCGTACAACAT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCGGAACCCATGCATGTaGAGCCCCACGAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRRNPCM*SPTKSS
Trigger: TGAGGACTTCGTGGGGCTGCACATGCATGGGTTCCG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCTGCATTCCGCAGGGTaGGCCGGAACCCATGCATGT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDILHSAG*AGTHAC
Trigger: ACATGCATGGGTTCCGGCGCACCCTGCGGAATGCAG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGCTTGTAGAACTCGCTaGTGTGCATCTCCACCGCAA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSACRTR*CASPPQ
Trigger: TTGCGGTGGAGATGCACAGCAGCGAGTTCTACAAGC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGCTTGTAGAACTCGCTaGTGTGCATCTCCACCGCAA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGACRTR*CASPPQ
Trigger: TTGCGGTGGAGATGCACAGCAGCGAGTTCTACAAGC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGACACAGTCCTCCATTaGAGGTGCAACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIDTVLH*RCNARS
Trigger: GGAACGTGCGTTGCACCTGCAATGGAGGACTGTGTC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGGGCGCCGAAGTAGATaGTACTCTCAGTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRGRRSR*YSQCSA
Trigger: CGCTGAGCACTGAGAGTAGCATCTACTTCGGCGCCC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGCGTGTCAGTCAGGCTaGGGATGTTATCCGCTTGCA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIACQSG*GCYPLA
Trigger: TGCAAGCGGATAACATCCGCAGCCTGACTGACACGC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGTCTGGGCTCAGTGTaGTGGCCAGGGAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSLGSV*WPGRQA
Trigger: AGCCTGTCTCCCTGGCCAGCACACTGAGCCCAGACT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGGCCTGTGGGCTCTGTaGCCTGGTTCATGCTCACAG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLGLWAL*PGSCSQ
Trigger: CTGTGAGCATGAACCAGGGCACAGAGCCCACAGGCC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACAGAGACACGCTGTCTaGTGGGCCTGTGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLQRHAV*WACGLC
Trigger: ACAGAGCCCACAGGCCCAGCAGACAGCGTGTCTCTG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGTGCCTCTGGAATTGTaGAAGGACAGAGACACGCTG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRVPLEL*KDRDTL
Trigger: CAGCGTGTCTCTGTCCTTGCACAATTCCAGAGGCAC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGAAGCCCAGCCAATCTaGTTCCACTTTTCTGTAACA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLEAQPI*FHFSVT
Trigger: TGTTACAGAAAAGTGGAAGCAGATTGGCTGGGCTTC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAATTTACCATGGCCACTaGACAGGCGGCCGTAATCTG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRIYHGH*TGGRNL
Trigger: CAGATTACGGCCGCCTGTGCAGTGGCCATGGTAAAT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGCTGCAGAGCTATTCTaGAGAAAATCAGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLAAELF*RKSGDD
Trigger: ATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGTCCCTGGCAGCCCCTaGGAGACAGTGGCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPVPGSP*ETVAKS
Trigger: GCTTTTGGCCACTGTCTCCCAGGGGCTGCCAGGGAC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCATGGAATGTGTGAAGTaGAAGCCCAGGGGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSMECVK*KPRGPV
Trigger: GACTGGACCCCTGGGCTTCCACTTCACACATTCCAT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAAACTGTTAGAACGCTaGTTCCCACTGGGACACTTT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLKLLER*FPLGHF
Trigger: AAAGTGTCCCAGTGGGAACCAGCGTTCTAACAGTTT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCCCCAGTCCAAGATCTaGATCATGGGTCTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGPQSKI*IMGLKP
Trigger: TGGCTTGAGACCCATGATCCAGATCTTGGACTGGGG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGACCTTCTCTGGGAACTaGGGCTTGTTGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLTFSGN*GLLSFS
Trigger: TGAAAATGACAACAAGCCCCAGTTCCCAGAGAAGGT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTGCAGTAGCAGACATTaGCGGGGATCCCTGATCTGT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGCSSRH*RGSLIC
Trigger: ACAGATCAGGGATCCCCGCCAATGTCTGCTACTGCA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGGCTCGAATCACCAGTaGGCTGTTATCCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSGSNHQ*AVIQAP
Trigger: AGGAGCTTGGATAACAGCCCACTGGTGATTCGAGCC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAATGGAAATGGGCAATaGTTTCATGGTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLNGNGQ*FHGPGW
Trigger: CCAACCTGGACCATGAAACCATTGCCCATTTCCATT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTGTTGTACTAACTCATaGTCCAGCATTCGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLCCTNS*SSIRAV
Trigger: GACAGCACGAATGCTGGACCATGAGTTAGTACAACA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCTGGATCACCATCTGTaGCTCGAACATGAATTACCT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLLDHHL*LEHELP
Trigger: AGGTAATTCATGTTCGAGCCACAGATGGTGATCCAG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGAGGGAGTGCTTTACTaGGATGCCCCCATCTACTGC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIEGVLY*DAPIYC
Trigger: GCAGTAGATGGGGGCATCCCAGTAAAGCACTCCCTC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAATTACCTTTTCGGGCTaGGAATCCGAGTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRITFSG*ESEWRE
Trigger: CTCCCTCCACTCGGATTCCCAGCCCGAAAAGGTAAT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATGCCACCCCCGTCAGTaGCCTTGGCCATCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPCHPRQ*PWPSGC
Trigger: ACAGCCTGATGGCCAAGGCCACTGACGGGGGTGGCA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCCACGGCTTGAACTCTaGTCAACAGAGCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIPRLEL*STEPWW
Trigger: CCACCAAGGCTCTGTTGACCAGAGTTCAAGCCGTGG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACACAGCGCTGAGAGCTaGGGTGCCCCCATCTTTGGC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPHSAES*GAPIFG
Trigger: GCCAAAGATGGGGGCACCCCAGCTCTCAGCGCTGTG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCCACTGTCTACGGCCTaGACAAGCAGAGAGTATCCA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSPLSTA*TSREYP
Trigger: TGGATACTCTCTGCTTGTCCAGGCCGTAGACAGTGG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGCACGACCACATCAATaGGTACCTGGAAGCGACCAT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRARPHQ*VPGSDH
Trigger: ATGGTCGCTTCCAGGTACCCATTGATGTGGTCGTGC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAGGCTGTCCTGCTTCTaGGTGAGGACTGCATTCCGC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRRLSCF*VRTAFR
Trigger: GCGGAATGCAGTCCTCACCCAGAAGCAGGACAGCCT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACCACACAAGGATCGTTaGACCCCGGACACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQPHKDR*TPDTVL
Trigger: GAGGACTGTGTCCGGGGTCCAACGATCCTTGTGTGG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTTCCCTGGTGGACACTaGCAGAGGAACGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRFPGGH*QRNGLL
Trigger: CAGGAGACCGTTCCTCTGCCAGTGTCCACCAGGGAA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACTGCCGCAGTCCAGCTaGAACCACAGCTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGLPQSS*NHSLPS
Trigger: GGATGGCAAGCTGTGGTTCCAGCTGGACTGCGGCAG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCATTCCGGCAGGGGTTTaGGAAGCAGGCTGTAATCTC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGIPAGV*EAGCNL
Trigger: GAGATTACAGCCTGCTTCCCAAACCCCTGCCGGAAT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAACTCAGGGTGAAACGTaGTCATTTCCTGGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRTQGET*SFPGAR
Trigger: GCGAGCACCAGGAAATGACCACGTTTCACCCTGAGT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCACTCAGGGTGAAACGTaGTCATTTCCTGGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGTQGET*SFPGAR
Trigger: GCGAGCACCAGGAAATGACCACGTTTCACCCTGAGT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGCCATTCTTCCGGATaGAGTCGCAGTCGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSHSSG*SRSRSG
Trigger: GCCGCTCCGACTGCGACTCCATCCGGAAGAATGGCT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGGCCTCATATTGGTCTaGGAAGTCCTCCGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQGLILV*EVLRER
Trigger: CCTCTCCCGGAGGACTTCCCAGACCAATATGAGGCC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGGCAGGGCCTCATATTaGTCTGGGAAGTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGGRASY*SGKSSG
Trigger: CCCGGAGGACTTCCCAGACCAATATGAGGCCCTGCC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCCAAATCCGTTTCGTTaGGGAATGGGTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGPNPFR*GMGEEG
Trigger: TCCCTCCTCACCCATTCCCCAACGAAACGGATTTGG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGTGGGCTCTGTGCCCTaGTTCATGCTCACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGVGSVP*FMLTAK
Trigger: TTTTGCTGTGAGCATGAACCAGGGCACAGAGCCCAC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGTGGGCTCTGTGCCCTaGTTCATGCTCACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRVGSVP*FMLTAK
Trigger: TTTTGCTGTGAGCATGAACCAGGGCACAGAGCCCAC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACCCCCACCCACCAAATaGAACCCAAAAAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRPPPTK*NPKSLM
Trigger: CATGAGGCTTTTTGGGTTCCATTTGGTGGGTGGGGG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCACCTAGTAGCATCTTaGCCTGACTGCAAAGCATTT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLHLVAS*PDCKAF
Trigger: AAATGCTTTGCAGTCAGGCCAAGATGCTACTAGGTG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCTTCCTCTGTGGGCTTaGGCAAGTCTCTTTCCCACT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSLPLWA*ASLFPT
Trigger: AGTGGGAAAGAGACTTGCCCAAGCCCACAGAGGAAG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGATGGCTTCCAGGAGGTaGCACATACATGTTCGAAAA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLMASRR*HIHVRK
Trigger: TTTTCGAACATGTATGTGCCACCTCCTGGAAGCCAT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGTGGATAGGGTGGGGTaGGAAGTAAGTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSVDRVG*EVSRRG
Trigger: TCCTCTCCTACTTACTTCCCACCCCACCCTATCCAC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCATCCCTTGCCTCCGCTaGCGATCCACGGCTCTACGA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIIPCLR*RSTALR
Trigger: TCGTAGAGCCGTGGATCGCCAGCGGAGGCAAGGGAT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATTCATGGCGGTATGGTaGACCCCAGTCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQFMAVW*TPVRGS
Trigger: AGAGCCTCTGACTGGGGTTCACCATACCGCCATGAA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTCGCTGAGACTGCTGTaGTGTGACCACCAACTGGAA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALISLRLL*CDHQLE
Trigger: TTCCAGTTGGTGGTCACATCACAGCAGTCTCAGCGA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAATCGATATCGATCGCTaGGACTGCTGTGATGTGACC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRIDIDR*DCCDVT
Trigger: GGTCACATCACAGCAGTCTCAGCGATCGATATCGAT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCATCGATATCGATCGCTaGGACTGCTGTGATGTGACC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGIDIDR*DCCDVT
Trigger: GGTCACATCACAGCAGTCTCAGCGATCGATATCGAT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTTCCAGTTGAGCTATTaGTGGCAAACTGCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLFQLSY*WQTAVY
Trigger: ATACACAGCAGTTTGCCATCAATAGCTCAACTGGAA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATCTCAAGCCAAGCAATaGCAGTGCCAACAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRSQAKQ*QCQQGD
Trigger: ATCTCCCTGTTGGCACTGTCATTGCTTGGCTTGAGA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTCTCAAGCCAAGCAATaGCAGTGCCAACAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSQAKQ*QCQQGD
Trigger: ATCTCCCTGTTGGCACTGTCATTGCTTGGCTTGAGA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCATTTGTCCCATCGGTaGCTTCCACACTCATATTAT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLHLSHR*LPHSYY
Trigger: ATAATATGAGTGTGGAAGTCACCGATGGGACAAATG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAATTGGCGGGGATCCCTaGTCTGTGACTTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRIGGDP*SVTLMD
Trigger: ATCCATCAAAGTCACAGATCAGGGATCCCCGCCAAT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCTGGACTGGTGGCATTaGTGCTTAGGATGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALILDWWH*CLGWVC
Trigger: ACACACCCATCCTAAGCATCAATGCCACCAGTCCAG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACTGAACCAGACATTCTaGCTGGGCAAAATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRLNQTF*LGKILR
Trigger: CCTGAGGATTTTGCCCAGTCAGAATGTCTGGTTCAG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTGTCATTCACATCACTaGCGCTCACTTCCACCATGG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSCHSHH*RSLPPW
Trigger: CCATGGTGGAAGTGAGCGTCAGTGATGTGAATGACA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACAGTGGCCCGCACGCTaGTGTTGTACGAAGACTGCT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGQWPAR*CCTKTA
Trigger: AGCAGTCTTCGTACAACATCAGCGTGCGGGCCACTG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGACCGCAAGATCCCATaGGGGTCCAACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQDRKIP*GSNTNS
Trigger: GGAGTTTGTGTTGGACCCTCATGGGATCTTGCGGTC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGGGTGCTTTCCTCAATaGCTCGCACGCGGATGTAAG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRGCFPQ*LARGCK
Trigger: CTTACATCCGCGTGCGAGTCATTGAGGAAAGCACCC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGGCCTCCCAGGGCGATaGTTTTCCCATCGTGACTGT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLGLPGR*FSHRDC
Trigger: ACAGTCACGATGGGAAAATCATCGCCCTGGGAGGCC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCACAATGCTGTTCCTaGCAGTCCAGCCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSQCCS*QSSPEQ
Trigger: CTGCTCAGGGCTGGACTGTCAGGAACAGCATTGTGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATCACAATGCTGTTCCTaGCAGTCCAGCCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSQCCS*QSSPEQ
Trigger: CTGCTCAGGGCTGGACTGTCAGGAACAGCATTGTGA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACGCGTGGGAATCGAGTaGCAAGCCTTGCTCACAATG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQRVGIE*QALLTM
Trigger: CATTGTGAGCAAGGCTTGTCACTCGATTCCCACGCG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGACGCAGAGCTAGTTTaGAATCCTCTTCTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLDAELV*NPLLCY
Trigger: ATAGCAAAGAAGAGGATTTCAAACTAGCTCTGCGTC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGGAGGCAGCTGGTCCTaGCTCAAGAACTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRGGSWS*LKNSSS
Trigger: TGAAGAGGAGTTCTTGAGTCAGGACCAGCTGCCTCC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGGAGGCAGCTGGTCCTaGCTCAAGAACTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQGGSWS*LKNSSS
Trigger: TGAAGAGGAGTTCTTGAGTCAGGACCAGCTGCCTCC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAGATACTGGCTAGGATaGAACTGGGGCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIRYWLG*NWGLLL
Trigger: CAGGAGAAGGCCCCAGTTTCATCCTAGCCAGTATCT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAGACACATCCGAGGATaGGGTGCCTCTGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIRHIRG*GASGIV
Trigger: CACAATTCCAGAGGCACCTCATCCTCGGATGTGTCT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTCCACAAAGGGAATGTaGAGGCTGGCGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSTKGM*RLARLS
Trigger: GCTCAGCCTCGCCAGCCTTCACATTCCCTTTGTGGA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTCCACAAAGGGAATGTaGAGGCTGGCGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDISTKGM*RLARLS
Trigger: GCTCAGCCTCGCCAGCCTTCACATTCCCTTTGTGGA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAGGTGGAGATTGCAGTaGGCTGAGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSRWRLQ*AEIMPL
Trigger: CAATGGCATGATCTCAGCTCACTGCAATCTCCACCT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAGGTGGAGATTGCAGTaGGCTGAGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRRWRLQ*AEIMPL
Trigger: CAATGGCATGATCTCAGCTCACTGCAATCTCCACCT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGGCAGGAGAATCGCTTaGACCCAGGAGGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRGRRIA*TQEVEI
Trigger: AATCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTATTCCCTAATTGGATaGACCTCAAAGCATGGACCA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLYSLIG*TSKHGP
Trigger: TGGTCCATGCTTTGAGGTTCATCCAATTAGGGAATA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGGGAAGGCAGCGGAGTaGAGAGCCAATTATCTGGAC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRGKAAE*RANYLD
Trigger: GTCCAGATAATTGGCTCTTCACTCCGCTGCCTTCCC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGACCAACAGCGTGGATaGCTTACAATTATATTCGAC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLDQQRG*LTIIFD
Trigger: GTCGAATATAATTGTAAGTCATCCACGCTGTTGGTC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGATTCACTTTGGTCCATaGTTCCAAATCCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLIHFGP*FQILSS
Trigger: AGAGGAGAGGATTTGGAAGCATGGACCAAAGTGAAT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCTGCTGACCACTCTCTaGCTTGTCCCTGGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALILLTTL*LVPGFY
Trigger: ATAGAAGCCAGGGACAAGGCAGAGAGTGGTCAGCAG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGGGTGTTAGCTGGCTaGACAGACACCACCCCTACA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRGVLAG*TDTTPT
Trigger: TGTAGGGGTGGTGTCTGTGCAGCCAGCTAACACCCC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGGAAATGCGCACAATTaGAGTAGCAGACATTGGCGG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSGNAHN*SSRHWR
Trigger: CCGCCAATGTCTGCTACTGCAATTGTGCGCATTTCC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATTGTACGAAGACTGCTaGTCACGGTCCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLYEDC*SRSSGC
Trigger: GCAGCCACTGGACCGTGAGCAGCAGTCTTCGTACAA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAATGACATTGCAGGAATaGCACTGTCTACGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRMTLQE*HCLRPG
Trigger: TCCAGGCCGTAGACAGTGGCATTCCTGCAATGTCAT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACCACCAGCTGCAAGATaGTGGTGCCCACTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQPPAAR*WCPLAY
Trigger: ATAAGCCAGTGGGCACCAGCATCTTGCAGCTGGTGG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAACCAACTGCTCCACATaGACGACCACATCAATGGGT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRTNCST*TTTSMG
Trigger: ACCCATTGATGTGGTCGTGCATGTGGAGCAGTTGGT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAATCTCATGCACCAACTaGTCCACATGCACGACCACA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRISCTN*STCTTT
Trigger: TGTGGTCGTGCATGTGGAGCAGTTGGTGCATGAGAT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCGGAACCCATGCATGTaGAGCCCCACGAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIRNPCM*SPTKSS
Trigger: TGAGGACTTCGTGGGGCTGCACATGCATGGGTTCCG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACGGAACCCATGCATGTaGAGCCCCACGAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRNPCM*SPTKSS
Trigger: TGAGGACTTCGTGGGGCTGCACATGCATGGGTTCCG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCAGTTGGTTGGTGCCTaGCACGGGCTGGATGCTGAT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIQLVGA*HGLDAD
Trigger: ATCAGCATCCAGCCCGTGGCAGGCACCAACCAACTG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGATAATCCCATTGCTTTaGAGTGTTCGAAGACGCAGA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLIIPLL*SVRRRR
Trigger: TCTGCGTCTTCGAACACTGCAAAGCAATGGGATTAT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATCCAGGAAGACCGAGTaGCAGCTCCCGTCGTTGACA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSRKTE*QLPSLT
Trigger: TGTCAACGACGGGAGCTGGCACTCGGTCTTCCTGGA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTCCAGGAAGACCGAGTaGCAGCTCCCGTCGTTGACA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSRKTE*QLPSLT
Trigger: TGTCAACGACGGGAGCTGGCACTCGGTCTTCCTGGA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGGGCGCCGAAGTAGATaGTACTCTCAGTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIGRRSR*YSQCSA
Trigger: CGCTGAGCACTGAGAGTAGCATCTACTTCGGCGCCC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCTGCTGCGCTTGTTCTaGAGCGGCAGCTCATTGTTA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALILLRLF*SGSSLL
Trigger: TAACAATGAGCTGCCGCTGCAGAACAAGCGCAGCAG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAGCCCGGCGTGCAGTTaGAGAGGAAGGAGCCGAACA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSPACS*RGRSRT
Trigger: TGTTCGGCTCCTTCCTCTGCAACTGCACGCCGGGCT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTGTGCTCCCCTGGTGTaGAGACCCTCCATCCTGGTT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRCAPLV*RPSILV
Trigger: AACCAGGATGGAGGGTCTGCACACCAGGGGAGCACA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATGTGCTCCCCTGGTGTaGAGACCCTCCATCCTGGTT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGCAPLV*RPSILV
Trigger: AACCAGGATGGAGGGTCTGCACACCAGGGGAGCACA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAGTGAGCTGAGATCATaGCATTGCACTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSSELRS*HCTLAW
Trigger: CCAGGCTAGAGTGCAATGGCATGATCTCAGCTCACT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCACCACTGCATATGTTaGCTCTTTTTCCAACGAGAA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLHHCIC*LFFQRE
Trigger: TTCTCGTTGGAAAAAGAGCCAACATATGCAGTGGTG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGGACAGTGTCTCTTGTaGGGTTGCCAATGTAGACTG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSGQCLL*GCQCRL
Trigger: CAGTCTACATTGGCAACCCCACAAGAGACACTGTCC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATTGACCTCACTTTCATaGCGGTATGGTGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRLTSLS*RYGEPQ
Trigger: CTGGGGTTCACCATACCGCCATGAAAGTGAGGTCAA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTTGACCTCACTTTCATaGCGGTATGGTGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGLTSLS*RYGEPQ
Trigger: CTGGGGTTCACCATACCGCCATGAAAGTGAGGTCAA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCAACGCCCCTGTCTGTaGCATACACTGTTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIQRPCL*HTLLAS
Trigger: ACTGGCTAACAGTGTATGCCACAGACAGGGGCGTTG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCTTTCGGTCACGTTCTaGCAGCTTGATCTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGLSVTF*QLDLVD
Trigger: GTCTACCAGATCAAGCTGCCAGAACGTGACCGAAAG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTTAATCCATTCAATGTaGAGGCGGGCCGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGLIHSM*RRAVED
Trigger: ATCCTCCACGGCCCGCCTCCACATTGAATGGATTAA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACAGAGGGGTGTTAGCTaGCTGCACAGACACCACCCC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPQRGVS*LHRHHP
Trigger: GGGGTGGTGTCTGTGCAGCCAGCTAACACCCCTCTG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCACTCATATTATAGATaGACCTCTGCTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLHSYYR*TSALHP
Trigger: TGGATGCAGAGCAGAGGTCCATCTATAATATGAGTG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACAGGATCTCCGTGTCTaGAAGCACATCCTCGGAAAT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRQDLRV*KHILGN
Trigger: ATTTCCGAGGATGTGCTTCCAGACACGGAGATCCTG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTTGTCCTGGGCCTCATaGTCCAGCCTCTCGGCAGTA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRLSWAS*SSLSAV
Trigger: TACTGCCGAGAGGCTGGACCATGAGGCCCAGGACAA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTGCAGTAGCAGACATTaGCGGGGATCCCTGATCTGT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALICSSRH*RGSLIC
Trigger: ACAGATCAGGGATCCCCGCCAATGTCTGCTACTGCA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGGCTCGAATCACCAGTaGGCTGTTATCCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIGSNHQ*AVIQAP
Trigger: AGGAGCTTGGATAACAGCCCACTGGTGATTCGAGCC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGATGCCTTGGCCTTCTaGACTGGTGGCATTGATGCT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIDALAF*TGGIDA
Trigger: AGCATCAATGCCACCAGTCCAGAAGGCCAAGGCATC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCTGCCCATAAGTCCCTaGATCACCATCTGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRLPISP*ITICGS
Trigger: CGAGCCACAGATGGTGATCCAGGGACTTATGGGCAG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACTGCCCATAAGTCCCTaGATCACCATCTGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLPISP*ITICGS
Trigger: CGAGCCACAGATGGTGATCCAGGGACTTATGGGCAG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTCCACTGTCATGAACTaGGGAGCATTGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLSTVMN*GALSFS
Trigger: TGAAAATGACAATGCTCCCCAGTTCATGACAGTGGA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTACCACCTCGCCCGGTaGGTCGCTCTCCTTCACATT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIYHLAR*VALLHI
Trigger: AATGTGAAGGAGAGCGACCCACCGGGCGAGGTGGTA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTCCTCCAGGATTAGGTaGATGTTGGACTGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSSRIR*MLDWQN
Trigger: GTTCTGCCAGTCCAACATCCACCTAATCCTGGAGGA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCAGATGAGCTGTCAATaGAGAAGACCCCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIQMSCQ*RRPHQL
Trigger: CAGCTGGTGGGGTCTTCTCCATTGACAGCTCATCTG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAGAGACTCTGTGTGCTaGAAGACCACAGCCGACCGC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRRDSVC*KTTADR
Trigger: GCGGTCGGCTGTGGTCTTCCAGCACACAGAGTCTCT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGGCTGTCCTGCTTCTaGGTGAGGACTGCATTCCGC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRLSCF*VRTAFR
Trigger: GCGGAATGCAGTCCTCACCCAGAAGCAGGACAGCCT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCCACACAAGGATCGTTaGACCCCGGACACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRPHKDR*TPDTVL
Trigger: GAGGACTGTGTCCGGGGTCCAACGATCCTTGTGTGG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAACACTGCATGTCCCCTaGACACGGCTTCTCCACACA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQTLHVP*TRLLHT
Trigger: TGTGTGGAGAAGCCGTGTCCAGGGGACATGCAGTGT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATTCCCTGGTGGACACTaGCAGAGGAACGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGFPGGH*QRNGLL
Trigger: CAGGAGACCGTTCCTCTGCCAGTGTCCACCAGGGAA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAACGTGGTCATTTCCTaGTGCTCGCCTCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPNVVIS*CSPPSP
Trigger: CGGGCTGGGAGGCGAGCACCAGGAAATGACCACGTT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGGCCTCATATTGGTCTaGGAAGTCCTCCGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLGLILV*EVLRER
Trigger: CCTCTCCCGGAGGACTTCCCAGACCAATATGAGGCC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGGCAGGGCCTCATATTaGTCTGGGAAGTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPGRASY*SGKSSG
Trigger: CCCGGAGGACTTCCCAGACCAATATGAGGCCCTGCC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCCAAATCCGTTTCGTTaGGGAATGGGTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIPNPFR*GMGEEG
Trigger: TCCCTCCTCACCCATTCCCCAACGAAACGGATTTGG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAGGATGAGGTGCCTCTaGAATTGTGCAAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRRMRCL*NCARTE
Trigger: CTCTGTCCTTGCACAATTCCAGAGGCACCTCATCCT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAGGATGAGGTGCCTCTaGAATTGTGCAAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGRMRCL*NCARTE
Trigger: CTCTGTCCTTGCACAATTCCAGAGGCACCTCATCCT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCGTCAAAGCCGCAGTTaGCAGACACATCCGAGGATG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRRQSRS*QTHPRM
Trigger: CATCCTCGGATGTGTCTGCCAACTGCGGCTTTGACG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCCCCCACCCACCAAATaGAACCCAAAAAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIPPPTK*NPKSLM
Trigger: CATGAGGCTTTTTGGGTTCCATTTGGTGGGTGGGGG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCTTCCTCTGTGGGCTTaGGCAAGTCTCTTTCCCACT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALILPLWA*ASLFPT
Trigger: AGTGGGAAAGAGACTTGCCCAAGCCCACAGAGGAAG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCCTTTGCATAAGGTTTaGTGTGTGATGTGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLPLHKV*CVMCVQ
Trigger: TTGCACACACATCACACACCAAACCTTATGCAAAGG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGTAGGTCCTTGCTGCTaGGTTCTCATACACGGTAGC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRVGPCC*VLIHGS
Trigger: GCTACCGTGTATGAGAACTCAGCAGCAAGGACCTAC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAACACCACTCGTGGGGTaGACTGAAAAGAGATCAACT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRTPLVG*TEKRST
Trigger: AGTTGATCTCTTTTCAGTTCACCCCACGAGTGGTGT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATTCATGGCGGTATGGTaGACCCCAGTCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGFMAVW*TPVRGS
Trigger: AGAGCCTCTGACTGGGGTTCACCATACCGCCATGAA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCGCTGAGACTGCTGTaGTGTGACCACCAACTGGAA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSLRLL*CDHQLE
Trigger: TTCCAGTTGGTGGTCACATCACAGCAGTCTCAGCGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGACCACTGCCATCCCTaGTGGAGTACTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLDHCHP*WSTGSL
Trigger: GAGAGATCCAGTACTCCATCAGGGATGGCAGTGGTC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACACGTTCTGGCAGCTTaGTCTGGTAGACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQHVLAA*SGRPSL
Trigger: CAGAGAAGGTCTACCAGATCAAGCTGCCAGAACGTG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGGTTGGCAATTGTTCTaGTTGCACCTGTACTGGAGT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGGWQLF*LHLYWS
Trigger: ACTCCAGTACAGGTGCAATCAGAACAATTGCCAACC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGGGACTCCAGTCGTCTaGATGACCCCTGAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLGTPVV*MTPEVD
Trigger: ATCTACCTCAGGGGTCATTCAGACGACTGGAGTCCC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAACCTCACTGCTCAGTaGTGGGAAGCCACTATCTAT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSNLTAQ*WEATIY
Trigger: ATAGATAGTGGCTTCCCATCACTGAGCAGTGAGGTT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCAGAGACAGACACATTaGGACTGTACAGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIQRQTH*DCTEAP
Trigger: TGGAGCCTCTGTACAGTCTCAATGTGTCTGTCTCTG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTTCCAACATCTGCCCTaGCACTGGCTCTATATTCCA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSFQHLP*HWLYIP
Trigger: TGGAATATAGAGCCAGTGTCAGGGCAGATGTTGGAA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTTCCAACATCTGCCCTaGCACTGGCTCTATATTCCA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGFQHLP*HWLYIP
Trigger: TGGAATATAGAGCCAGTGTCAGGGCAGATGTTGGAA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTGGCTTGAACTTGAGTaGCCAAGTGGCCCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRWLELE*PSGPFQ
Trigger: TTGGAAGGGGCCACTTGGTCACTCAAGTTCAAGCCA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACAGGAGGTCGGCCACTaGAACAGAGGCCTCGCTATA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPQEVGH*NRGLAI
Trigger: TATAGCGAGGCCTCTGTTTCAGTGGCCGACCTCCTG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAGTGGAGGGAGTAAGTaGCTTGTCCATTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSGGSK*LVHWLP
Trigger: GGGGAGCCAATGGACAAGTCACTTACTCCCTCCACT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGTGGAGGGAGTAAGTaGCTTGTCCATTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSGGSK*LVHWLP
Trigger: GGGGAGCCAATGGACAAGTCACTTACTCCCTCCACT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCCACCACAGAGAAGGTaGATGTGGGGTCTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRPPQRR*MWGLSR
Trigger: ACGAGACAGACCCCACATTCACCTTCTCTGTGGTGG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCCACCATGGCCTGTGTaGCAAAAAGCCCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRPPWPV*QKAHQW
Trigger: CCACTGATGGGCTTTTTGTCACACAGGCCATGGTGG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACCACCATGGCCTGTGTaGCAAAAAGCCCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLPPWPV*QKAHQW
Trigger: CCACTGATGGGCTTTTTGTCACACAGGCCATGGTGG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGATGATGATGCCAGATaGGCTGTCAATGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGDDDAR*AVNGED
Trigger: GTCTTCTCCATTGACAGCTCATCTGGCATCATCATC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGACCGCAAGATCCCATaGGGGTCCAACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIDRKIP*GSNTNS
Trigger: GGAGTTTGTGTTGGACCCTCATGGGATCTTGCGGTC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCATGAATCTTCCCAATaGCCCCACCAGGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGHESSQ*PHQESH
Trigger: ATGACTTTCCTGGTGGGGTCATTGGGAAGATTCATG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATTTCAAAGCGGATGGTaGCAGTGTTCTGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRFQSGW*QCSAAS
Trigger: AGATGCTGCAGAACACTGTCACCATCCGCTTTGAAA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACTTCTCCAAGATGGCTaGGATGCGCATGATATTCTC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRLLQDG*DAHDIL
Trigger: GAGAATATCATGCGCATCTCAGCCATCTTGGAGAAG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACGCGTGGGAATCGAGTaGCAAGCCTTGCTCACAATG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLRVGIE*QALLTM
Trigger: CATTGTGAGCAAGGCTTGTCACTCGATTCCCACGCG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGGTCCTGCACTAGCGTaGTGTTGTTGCGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGGPALA*CCCGSS
Trigger: ACTACTCCCGCAACAACATCACGCTAGTGCAGGACC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGGTCCTGCACTAGCGTaGTGTTGTTGCGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIGPALA*CCCGSS
Trigger: ACTACTCCCGCAACAACATCACGCTAGTGCAGGACC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGAGGCAGCTGGTCCTaGCTCAAGAACTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRGGSWS*LKNSSS
Trigger: TGAAGAGGAGTTCTTGAGTCAGGACCAGCTGCCTCC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAGATACTGGCTAGGATaGAACTGGGGCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRRYWLG*NWGLLL
Trigger: CAGGAGAAGGCCCCAGTTTCATCCTAGCCAGTATCT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGGCAGGAGAATCGCTTaGACCCAGGAGGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIGRRIA*TQEVEI
Trigger: AATCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAATATCTGCGTCTGTTaGAGTCACCTGGGCAACACT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRNICVC*SHLGNT
Trigger: AGTGTTGCCCAGGTGACTGCAACAGACGCAGATATT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAGTATTCAGTGGCCGTaGTGTAACAATCAGACCCGA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRSIQWP*CNNQTR
Trigger: TCGGGTCTGATTGTTACAGCACGGCCACTGAATACT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCTATTGATGGCAAACTaGTGTGTATCTGTCAAGACT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLLLMAN*CVSVKT
Trigger: AGTCTTGACAGATACACAGCAGTTTGCCATCAATAG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGCGGATGGCACCACTTaGTTTATCTATTTCAAATCT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLADGTT*FIYFKS
Trigger: AGATTTGAAATAGATAAAGCAAGTGGTGCCATCCGC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACATAATCAAGCTCTTTaGTCAAGCGGATGGCACCAC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRHNQAL*SSGWHH
Trigger: GTGGTGCCATCCGCTTGAGCAAAGAGCTTGATTATG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGGGGTGTTAGCTGGCTaGACAGACACCACCCCTACA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPGVLAG*TDTTPT
Trigger: TGTAGGGGTGGTGTCTGTGCAGCCAGCTAACACCCC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCCCAACACCCTTCTCTaGATCAAAAGCGCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSPNTLL*IKSAVK
Trigger: TTTGACAGCGCTTTTGATGCAGAGAAGGGTGTTGGG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGTTGATAAGAGGATGTaGGCTCATAATCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSVDKRM*AHNPGP
Trigger: AGGCCCTGGATTATGAGCGCACATCCTCTTATCAAC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGGCAATTGTTCTGATTaGACCTGTACTGGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRGNCSD*TCTGVH
Trigger: GTGGACTCCAGTACAGGTGCAATCAGAACAATTGCC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTTCAACGGGACTCTCTaGAGTCAGTTGGGGGCTACC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIFNGTL*SQLGAT
Trigger: GGTAGCCCCCAACTGACTGCAGAGAGTCCCGTTGAA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGAACGAGAACCTCACTaGTCAGTGATGGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHREREPH*SVMGSH
Trigger: GTGGCTTCCCATCACTGAGCAGTGAGGTTCTCGTTC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGCCCCTTCCAACATCTaGCCTGACACTGGCTCTATA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQAPSNI*PDTGSI
Trigger: TATAGAGCCAGTGTCAGGGCAGATGTTGGAAGGGGC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGACAGGAATGAGGGAGTaGTTTACTGGGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRTGMRE*FTGMPP
Trigger: TGGGGGCATCCCAGTAAAGCACTCCCTCATTCCTGT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTCCAGAGACTCTGTGTaGTGGAAGACCACAGCCGAC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSRDSV*WKTTAD
Trigger: GTCGGCTGTGGTCTTCCAGCACACAGAGTCTCTGGA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCACCAACTGCTCCACATaGACGACCACATCAATGGGT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALITNCST*TTTSMG
Trigger: ACCCATTGATGTGGTCGTGCATGTGGAGCAGTTGGT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCATCTCATGCACCAACTaGTCCACATGCACGACCACA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIISCTN*STCTTT
Trigger: TGTGGTCGTGCATGTGGAGCAGTTGGTGCATGAGAT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGTCCTCCATTGCAGGTaGAACGCACGTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQVLHCR*NARSCR
Trigger: TCTACAGGAACGTGCGTTGCACCTGCAATGGAGGAC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGACACAGTCCTCCATTaGAGGTGCAACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGDTVLH*RCNARS
Trigger: GGAACGTGCGTTGCACCTGCAATGGAGGACTGTGTC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGCTGGAACCACAGCTTaGCATCCACAATCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRAGTTA*HPQSSE
Trigger: TTCTGAAGATTGTGGATGGCAAGCTGTGGTTCCAGC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAGATGCTACTCTCAGTaGTCAGCGTCTGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSRCYSQ*SASGSR
Trigger: TCTACTTCCAGACGCTGAGCACTGAGAGTAGCATCT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCGTGTCAGTCAGGCTaGGGATGTTATCCGCTTGCA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLACQSG*GCYPLA
Trigger: TGCAAGCGGATAACATCCGCAGCCTGACTGACACGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACTGCTGCGCTTGTTCTaGAGCGGCAGCTCATTGTTA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLLRLF*SGSSLL
Trigger: TAACAATGAGCTGCCGCTGCAGAACAAGCGCAGCAG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTGCGGGAGTAGTTCTTaGGGAAGACCTTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRCGSSS*GRPSCG
Trigger: TCCGCAAGAAGGTCTTCCGCAAGAACTACTCCCGCA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATGTGCTCCCCTGGTGTaGAGACCCTCCATCCTGGTT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPCAPLV*RPSILV
Trigger: AACCAGGATGGAGGGTCTGCACACCAGGGGAGCACA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGTGCCTCTGGAATTGTaGAAGGACAGAGACACGCTG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRVPLEL*KDRDTL
Trigger: CAGCGTGTCTCTGTCCTTGCACAATTCCAGAGGCAC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTCATTCCACAGACAATaGTCCACTGGGACAGAAGCC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALISFHRQ*STGTEA
Trigger: GGCTTCTGTCCCAGTGGAGCATTGTCTGTGGAATGA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTTACTCCCAAGTTCTTaGTTACTATATGACGAGCAC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLLLPSS*LLYDEH
Trigger: GTGCTCGTCATATAGTAAGCAAGAACTTGGGAGTAA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTCTGTTGCAGTCACCTaGGCAACACTAGTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSVAVT*ATLVLR
Trigger: TCTAAGGACTAGTGTTGCCCAGGTGACTGCAACAGA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAGTAGAATTCTCCATTaGAACCAATATCTGCGTCTG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLSRILH*NQYLRL
Trigger: CAGACGCAGATATTGGTTCCAATGGAGAATTCTACT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCCCTGATGGAGTACTaGATCTCTCCATCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSLMEY*ISPSLP
Trigger: CGGAAGGGATGGAGAGATCCAGTACTCCATCAGGGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACAACGCCCCTGTCTGTaGCATACACTGTTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQQRPCL*HTLLAS
Trigger: ACTGGCTAACAGTGTATGCCACAGACAGGGGCGTTG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAATGGTGGAGTAGAGTaGAACAACGCCCCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALINGGVE*NNAPVC
Trigger: ACAGACAGGGGCGTTGTTCCACTCTACTCCACCATT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCGGCTGAGAGAATTCTaGGCCATTATCATTATTATC +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLRLREF*AIIIII
Trigger: GATAATAATGATAATGGCCCAGAATTCTCTCAGCCG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGGTCCAGCTCACGGCTaGCTTCTACCACCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPGPAHG*LLPPAH
Trigger: ATGAGCTGGTGGTAGAAGCCAGCCGTGAGCTGGACC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGATTACCTTTTCGGGCTaGGAATCCGAGTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRITFSG*ESEWRE
Trigger: CTCCCTCCACTCGGATTCCCAGCCCGAAAAGGTAAT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATGGTCAACAGAGCCTTaGTGGCTGTGTTCTCATAGA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRWSTEP*WLCSHR
Trigger: TCTATGAGAACACAGCCACCAAGGCTCTGTTGACCA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACCACGGCTTGAACTCTaGTCAACAGAGCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGPRLEL*STEPWW
Trigger: CCACCAAGGCTCTGTTGACCAGAGTTCAAGCCGTGG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCATCTGTCCGTTGGGCTaGCTGTCTACATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIICPLG*LSTSSA
Trigger: AGCAGAAGATGTAGACAGCCAGCCCAACGGACAGAT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCACTGTCTACGGCCTaGACAAGCAGAGAGTATCCA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRPLSTA*TSREYP
Trigger: TGGATACTCTCTGCTTGTCCAGGCCGTAGACAGTGG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCCTGAATCCTTTGCCTaGACACACAACACGTATTCC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSPESFA*THNTYS
Trigger: GGAATACGTGTTGTGTGTCCAGGCAAAGGATTCAGG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAAATTTCCAGGGGAATaGCTGTGGGCTTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQKFPGE*LWACGC
Trigger: GCACCCACAAGCCCACAGCCATTCCCCTGGAAATTT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAACATCAATGGGTACCTaGAAGCGACCATCACTCACA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRTSMGT*KRPSLT
Trigger: TGTGAGTGATGGTCGCTTCCAGGTACCCATTGATGT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCACATCAATGGGTACCTaGAAGCGACCATCACTCACA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSTSMGT*KRPSLT
Trigger: TGTGAGTGATGGTCGCTTCCAGGTACCCATTGATGT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCACACTGCATGTCCCCTaGACACGGCTTCTCCACACA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDITLHVP*TRLLHT
Trigger: TGTGTGGAGAAGCCGTGTCCAGGGGACATGCAGTGT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATATCCAGGTTGCTCCTaGAGTCACTCTGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQYPGCS*SHSGSR
Trigger: CCTGCTTCCAGAGTGACTCCAGGAGCAACCTGGATA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACCAAATCCGTTTCGTTaGGGAATGGGTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQPNPFR*GMGEEG
Trigger: TCCCTCCTCACCCATTCCCCAACGAAACGGATTTGG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGATCAAGCTTGCTTGTTaGGACAGTATGACTTGTGAA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLIKLAC*DSMTCE
Trigger: TTCACAAGTCATACTGTCCCAACAAGCAAGCTTGAT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATGCATATATTTACCATaGCCACTGCACAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQCIYLP*PLHRRP
Trigger: CGGCCGCCTGTGCAGTGGCCATGGTAAATATATGCA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGGTCACAGCAAAGGGTaGGCACAATTTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRGHSKG*AQFSSV
Trigger: CACTGAAGAAAATTGTGCCCACCCTTTGCTGTGACC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGTGGATAGGGTGGGGTaGGAAGTAAGTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRVDRVG*EVSRRG
Trigger: TCCTCTCCTACTTACTTCCCACCCCACCCTATCCAC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGCAATACCTGTGCACTaGGAAGGCAGCGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIAIPVH*EGSGVK
Trigger: CTTCACTCCGCTGCCTTCCCAGTGCACAGGTATTGC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCAATACCTGTGCACTaGGAAGGCAGCGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLAIPVH*EGSGVK
Trigger: CTTCACTCCGCTGCCTTCCCAGTGCACAGGTATTGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CAA 72 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTaGGGCAAGTCTCTTTCCCACTCTGGGTATGTTTCC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVG*GKSLSHSGYVS
Trigger: GGAAACATACCCAGAGTGGGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATTCTACTCTGGCTGTTaGCGTAGGTCCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGFYSGC*RRSLLL
Trigger: CAGCAGCAAGGACCTACGTCAACAGCCAGAGTAGAA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGACCACTTAAGGAGATaGCACCACTCGTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLDHLRR*HHSWGE
Trigger: TTCACCCCACGAGTGGTGTCATCTCCTTAAGTGGTC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGACCACTTAAGGAGATaGCACCACTCGTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIDHLRR*HHSWGE
Trigger: TTCACCCCACGAGTGGTGTCATCTCCTTAAGTGGTC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAGAAAGGAACATGAGTaGCTACATGGATTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSRKEHE*LHGLLG
Trigger: CCCCAACAATCCATGTAGTCACTCATGTTCCTTTCT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGGTCAGCAGTCTCCATaGCGATTTCTGTGGATTACC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRGQQSP*RFLWIT
Trigger: GGTAATCCACAGAAATCGTCATGGAGACTGCTGACC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGCTTGTTCCAATGCGTaGGTTTTCCTTTACAGATCC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSACSNA*VFLYRS
Trigger: GGATCTGTAAAGGAAAACTCACGCATTGGAACAAGC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCACCACCCAAATGGTTaGCTGTTTTGGAGAGGGACC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRHHPNG*LFWRGT
Trigger: GGTCCCTCTCCAAAACAGTCAACCATTTGGGTGGTG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACACGTTCTGGCAGCTTaGTCTGGTAGACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGHVLAA*SGRPSL
Trigger: CAGAGAAGGTCTACCAGATCAAGCTGCCAGAACGTG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCCAAAGGTTTTGCGATaGCAATTGTCCCAACACCCT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIPKVLR*QLSQHP
Trigger: AGGGTGTTGGGACAATTGTCATCGCAAAACCTTTGG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACCTTGGCTAGGATGGTaGCTCCATACTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQPWLGW*LHTQCW
Trigger: CCAACATTGAGTATGGAGTCACCATCCTAGCCAAGG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTCTGTGGCTCGAACATaGATTACCTTTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSVART*ITFVPA
Trigger: TGCAGGAACAAAGGTAATTCATGTTCGAGCCACAGA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACTGAGACTGGGTGAATaGTGGCAAGAACGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLRLGE*WQERFR
Trigger: CCTGAAACGTTCTTGCCATCATTCACCCAGTCTCAG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCTGAACCAGACATTCTaGCTGGGCAAAATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRLNQTF*LGKILR
Trigger: CCTGAGGATTTTGCCCAGTCAGAATGTCTGGTTCAG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGTGGGGTCTGTCTCGTaGTCTAGGTCCTTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIVGSVS*SRSFKV
Trigger: TACCTTGAAGGACCTAGATCACGAGACAGACCCCAC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTCCAGATCCATAGAGTaGGTATCGTATATATCCATT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLSRSIE*VSYISI
Trigger: AATGGATATATACGATACTCACTCTATGGATCTGGA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCGACAAAATAGAGAATaGAAAGGGAGGCCCATTGTG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGRQNRE*KGRPIV
Trigger: CACAATGGGCCTCCCTTTTCATTCTCTATTTTGTCG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTTTCAAAGCGGATGGTaGCAGTGTTCTGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIFQSGW*QCSAAS
Trigger: AGATGCTGCAGAACACTGTCACCATCCGCTTTGAAA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATGGCTGAGATGCGCATaGTATTCTCCAGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQWLRCA*YSPGVF
Trigger: GAAGACACCTGGAGAATATCATGCGCATCTCAGCCA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGATACTGGCTAGGATaGAACTGGGGCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRYWLG*NWGLLL
Trigger: CAGGAGAAGGCCCCAGTTTCATCCTAGCCAGTATCT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATCGTTGGGGAATGGGTaGGGAGGGAGATACTGGCTA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSLGNG*GGRYWL
Trigger: TAGCCAGTATCTCCCTCCTCACCCATTCCCCAACGA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAGACACATCCGAGGATaGGGTGCCTCTGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLRHIRG*GASGIV
Trigger: CACAATTCCAGAGGCACCTCATCCTCGGATGTGTCT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACAAGAGCAGCCTTACTaGGTGCAAGCACATATTTGT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRQEQPY*VQAHIC
Trigger: ACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTGGATAATACCTCCATaGGTAGGTCTGACCAAGAGA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGWIIPP*VGLTKR
Trigger: TCTCTTGGTCAGACCTACTCATGGAGGTATTATCCA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGGGAAGGCAGCGGAGTaGAGAGCCAATTATCTGGAC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPGKAAE*RANYLD
Trigger: GTCCAGATAATTGGCTCTTCACTCCGCTGCCTTCCC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGGGAAAATTCACTTATaGTCACATCGTACACTTCTT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLGKIHL*SHRTLL
Trigger: AAGAAGTGTACGATGTGAGCATAAGTGAATTTTCCC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATGGGGTGTGGTCATTTaGATCTTCTATGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRWGVVI*IFYADG
Trigger: ACCATCAGCATAGAAGATGCAAATGACCACACCCCA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCCGATCAAGAATGTCTaGGGCAGTGATGACCCCACT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIPIKNV*GSDDPT
Trigger: AGTGGGGTCATCACTGCCGCAGACATTCTTGATCGG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCTCCAGAAAATGTTCTaGCTGCTGTTCTCGATCCAA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGLQKMF*LLFSIQ
Trigger: TTGGATCGAGAACAGCAGGCAGAACATTTTCTGGAG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCTGTGGCTTCAATCTaGAGGATCTCCGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSVASI*RISVSG
Trigger: TCCAGACACGGAGATCCTGCAGATTGAAGCCACAGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGGAAATGCGCACAATTaGAGTAGCAGACATTGGCGG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRGNAHN*SSRHWR
Trigger: CCGCCAATGTCTGCTACTGCAATTGTGCGCATTTCC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCATTGGAAGCCATTCCTaGCATATTGGTGGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSIGSHS*HIGGLN
Trigger: ATTCAGGCCACCAATATGGCAGGAATGGCTTCCAAT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGAACGAGAACCTCACTaGTCAGTGATGGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIREREPH*SVMGSH
Trigger: GTGGCTTCCCATCACTGAGCAGTGAGGTTCTCGTTC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCTAATATGCACCTGTaGAGTGCTGGTGAACAACCC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRPNMHL*SAGEQP
Trigger: GGGTTGTTCACCAGCACTGCACAGGTGCATATTAGG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACCTCAGCTACGTATGTaGTTTGTGAAAAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQPQLRM*FVKRQG
Trigger: GCCCTGCCTTTTCACAAAGCACATACGTAGCTGAGG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAATTACCTTTGTTCCTaGAGCCACGTTCTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGNYLCS*SHVLSH
Trigger: GTGAGAGAGAACGTGGCTGCAGGAACAAAGGTAATT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCCCCTTCCAACATCTaGCCTGACACTGGCTCTATA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLAPSNI*PDTGSI
Trigger: TATAGAGCCAGTGTCAGGGCAGATGTTGGAAGGGGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGATGCCCCCATCTACTaGTTTGACAAAGAACGAAAG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSDAPIY*FDKERK
Trigger: CTTTCGTTCTTTGTCAAAGCAGTAGATGGGGGCATC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGATGCCCCCATCTACTaGTTTGACAAAGAACGAAAG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRDAPIY*FDKERK
Trigger: CTTTCGTTCTTTGTCAAAGCAGTAGATGGGGGCATC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAACCTTCCACTCACTTTaGACCAGGCCCAGAGCAAAC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLTFHSL*TRPRAN
Trigger: GTTTGCTCTGGGCCTGGTGCAAAGTGAGTGGAAGGT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACCACCAGCTGCAAGATaGTGGTGCCCACTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPPPAAR*WCPLAY
Trigger: ATAAGCCAGTGGGCACCAGCATCTTGCAGCTGGTGG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATCTGTCACCACCAGCTaGAAGATGCTGGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSVTTS*KMLVPT
Trigger: AGTGGGCACCAGCATCTTGCAGCTGGTGGTGACAGA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATCCAGAGACTCTGTGTaGTGGAAGACCACAGCCGAC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSRDSV*WKTTAD
Trigger: GTCGGCTGTGGTCTTCCAGCACACAGAGTCTCTGGA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGCTTGTAGAACTCGCTaGTGTGCATCTCCACCGCAA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGACRTR*CASPPQ
Trigger: TTGCGGTGGAGATGCACAGCAGCGAGTTCTACAAGC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGTCCTCCATTGCAGGTaGAACGCACGTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGVLHCR*NARSCR
Trigger: TCTACAGGAACGTGCGTTGCACCTGCAATGGAGGAC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGTCCTCCATTGCAGGTaGAACGCACGTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIVLHCR*NARSCR
Trigger: TCTACAGGAACGTGCGTTGCACCTGCAATGGAGGAC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACTGCTGCGCTTGTTCTaGAGCGGCAGCTCATTGTTA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGLLRLF*SGSSLL
Trigger: TAACAATGAGCTGCCGCTGCAGAACAAGCGCAGCAG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATGCGGGAGTAGTTCTTaGGGAAGACCTTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLCGSSS*GRPSCG
Trigger: TCCGCAAGAAGGTCTTCCGCAAGAACTACTCCCGCA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTGCGGGAGTAGTTCTTaGGGAAGACCTTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRCGSSS*GRPSCG
Trigger: TCCGCAAGAAGGTCTTCCGCAAGAACTACTCCCGCA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGTGCCTCTGGAATTGTaGAAGGACAGAGACACGCTG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIVPLEL*KDRDTL
Trigger: CAGCGTGTCTCTGTCCTTGCACAATTCCAGAGGCAC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACATCCGAGGATGAGGTaGCTCTGGAATTGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLHPRMR*LWNCAR
Trigger: CCTTGCACAATTCCAGAGGCACCTCATCCTCGGATG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCATCCGAGGATGAGGTaGCTCTGGAATTGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIHPRMR*LWNCAR
Trigger: CCTTGCACAATTCCAGAGGCACCTCATCCTCGGATG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATCATTCCACAGACAATaGTCCACTGGGACAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSFHRQ*STGTEA
Trigger: GGCTTCTGTCCCAGTGGAGCATTGTCTGTGGAATGA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATTGAAAGGTATGCCATaGTCGCCGGCAGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRLKGMP*SPAEFS
Trigger: TGAAAATTCTGCCGGCGAGCATGGCATACCTTTCAA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCACAAACCAGCCTGTTTaGAACAGGCAAACGTACAAG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGTNQPV*NRQTYK
Trigger: CTTGTACGTTTGCCTGTTGCAAACAGGCTGGTTTGT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGTTACCTCAAAAGTTTaGAGACCAACAGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGVTSKV*RPTAWM
Trigger: CATCCACGCTGTTGGTCTGCAAACTTTTGAGGTAAC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGATCCCCAGCCACAATaGAAACAGATTCGATCTCTC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIDPQPQ*KQIRSL
Trigger: GAGAGATCGAATCTGTTTCCATTGTGGCTGGGGATC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGGACAGTGTCTCTTGTaGGGTTGCCAATGTAGACTG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQGQCLL*GCQCRL
Trigger: CAGTCTACATTGGCAACCCCACAAGAGACACTGTCC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATGGTTGCTGAAATTCTaGGGTGTGGTCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRWLLKF*GVVICI
Trigger: GATGCAAATGACCACACCCCAGAATTTCAGCAACCA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAAACTGTTAGAACGCTaGTTCCCACTGGGACACTTT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRKLLER*FPLGHF
Trigger: AAAGTGTCCCAGTGGGAACCAGCGTTCTAACAGTTT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGAATCTGTAAATTTCTaGGGAGGATTCAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLESVNF*GGFKIQ
Trigger: CTGGATTTTGAATCCTCCCCAGAAATTTACAGATTC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTATGAAATAACTCCCTaGCAAGCCACTTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLYEITP*QATFSK
Trigger: CTTTGAAAAAGTGGCTTGCCAGGGAGTTATTTCATA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAATGTTAGCACCAACTaGCAGATCCTCCTTTACAGC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGNVSTN*QILLYS
Trigger: GCTGTAAAGGAGGATCTGCCAGTTGGTGCTAACATT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATCCCTGATGGAGTACTaGATCTCTCCATCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSLMEY*ISPSLP
Trigger: CGGAAGGGATGGAGAGATCCAGTACTCCATCAGGGA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACTGGTAGACCTTCTCTaGGAACTGGGGCTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLLVDLL*ELGLVV
Trigger: GACAACAAGCCCCAGTTCCCAGAGAAGGTCTACCAG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCTTTCGGTCACGTTCTaGCAGCTTGATCTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRLSVTF*QLDLVD
Trigger: GTCTACCAGATCAAGCTGCCAGAACGTGACCGAAAG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCAGGATCTCCGTGTCTaGAAGCACATCCTCGGAAAT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRQDLRV*KHILGN
Trigger: ATTTCCGAGGATGTGCTTCCAGACACGGAGATCCTG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAATATATATGATGCCTTaGCCTTCTGGACTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRIYMMP*PSGLVA
Trigger: TGCCACCAGTCCAGAAGGCCAAGGCATCATATATAT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCTGGATCACCATCTGTaGCTCGAACATGAATTACCT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSLDHHL*LEHELP
Trigger: AGGTAATTCATGTTCGAGCCACAGATGGTGATCCAG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAGTGGAAAGCTGGGCTaGTTTCACGGTCAAGGCGTT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSGKLG*FHGQGV
Trigger: AACGCCTTGACCGTGAAACCAGCCCAGCTTTCCACT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGGATTAGGTGGATGTTaGACTGGCAGAACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLGLGGC*TGRTCH
Trigger: GTGGCAGGTTCTGCCAGTCCAACATCCACCTAATCC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGGATTAGGTGGATGTTaGACTGGCAGAACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGGLGGC*TGRTCH
Trigger: GTGGCAGGTTCTGCCAGTCCAACATCCACCTAATCC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGATCTGTCCGTTGGGCTaGCTGTCTACATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRICPLG*LSTSSA
Trigger: AGCAGAAGATGTAGACAGCCAGCCCAACGGACAGAT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGCACGACCACATCAATaGGTACCTGGAAGCGACCAT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRARPHQ*VPGSDH
Trigger: ATGGTCGCTTCCAGGTACCCATTGATGTGGTCGTGC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCTGGATCAGGTAGGCTaGCTTGTAGAACTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDILDQVG*LVELAA
Trigger: AGCAGCGAGTTCTACAAGCCAGCCTACCTGATCCAG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCTGGATCAGGTAGGCTaGCTTGTAGAACTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRLDQVG*LVELAA
Trigger: AGCAGCGAGTTCTACAAGCCAGCCTACCTGATCCAG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACTGGATCAGGTAGGCTaGCTTGTAGAACTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGLDQVG*LVELAA
Trigger: AGCAGCGAGTTCTACAAGCCAGCCTACCTGATCCAG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAATTCCGGCAGGGGTTTaGGAAGCAGGCTGTAATCTC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGIPAGV*EAGCNL
Trigger: GAGATTACAGCCTGCTTCCCAAACCCCTGCCGGAAT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAATTCCGGCAGGGGTTTaGGAAGCAGGCTGTAATCTC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLIPAGV*EAGCNL
Trigger: GAGATTACAGCCTGCTTCCCAAACCCCTGCCGGAAT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAACTCAGGGTGAAACGTaGTCATTTCCTGGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGTQGET*SFPGAR
Trigger: GCGAGCACCAGGAAATGACCACGTTTCACCCTGAGT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGTGGGCTCTGTGCCCTaGTTCATGCTCACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLVGSVP*FMLTAK
Trigger: TTTTGCTGTGAGCATGAACCAGGGCACAGAGCCCAC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGGATGAGGTGCCTCTaGAATTGTGCAAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQRMRCL*NCARTE
Trigger: CTCTGTCCTTGCACAATTCCAGAGGCACCTCATCCT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTCTCGTAGTCACTCATaGCTACTTCGGAATCGTCAA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSRSHS*LLRNRQ
Trigger: TTGACGATTCCGAAGTAGCCATGAGTGACTACGAGA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTCTCGTAGTCACTCATaGCTACTTCGGAATCGTCAA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSSRSHS*LLRNRQ
Trigger: TTGACGATTCCGAAGTAGCCATGAGTGACTACGAGA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCAGACAATGCTCCACTaGGACAGAAGCCCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIQTMLH*DRSPAN
Trigger: ATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCAGACAATGCTCCACTaGGACAGAAGCCCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRQTMLH*DRSPAN
Trigger: ATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATGCATATATTTACCATaGCCACTGCACAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGCIYLP*PLHRRP
Trigger: CGGCCGCCTGTGCAGTGGCCATGGTAAATATATGCA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATGCATATATTTACCATaGCCACTGCACAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLCIYLP*PLHRRP
Trigger: CGGCCGCCTGTGCAGTGGCCATGGTAAATATATGCA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCCAAAGAAGGAATGGTaGAAGTCAGAGGGTCCATCA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIPKKEW*KSEGPS
Trigger: TGATGGACCCTCTGACTTCCACCATTCCTTCTTTGG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCATGGCTTCCAGGAGGTaGCACATACATGTTCGAAAA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGMASRR*HIHVRK
Trigger: TTTTCGAACATGTATGTGCCACCTCCTGGAAGCCAT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGCATTTATTCCCTAATTaGATGAACCTCAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLHLFPN*MNLKAW
Trigger: CCATGCTTTGAGGTTCATCCAATTAGGGAATAAATG...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGTGGATAGGGTGGGGTaGGAAGTAAGTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRVDRVG*EVSRRG
Trigger: TCCTCTCCTACTTACTTCCCACCCCACCCTATCCAC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGACAGTACATACTAATTaGTCCAAACACGCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLTVHTN*SKHAPN
Trigger: ATTTGGAGCGTGTTTGGACCAATTAGTATGTACTGT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTGCAGACCAACAGCGTaGATGACTTACAATTATATT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLCRPTA*MTYNYI
Trigger: AATATAATTGTAAGTCATCCACGCTGTTGGTCTGCA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCATAGATCTATTAAGGTaGTGCCCATTCTACTCTGGC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSIDLLR*CPFYSG
Trigger: GCCAGAGTAGAATGGGCATCACCTTAATAGATCTAT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACCAAATCCTCTCCTCTaGCAGAACCTTTTACTATCA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRPNPLL*QNLLLS
Trigger: TGATAGTAAAAGGTTCTGTCAGAGGAGAGGATTTGG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTTAGCCAGGAAGAACTaGTCTAAAGGATCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRLARKN*SKGSPA
Trigger: GGCTGGGGATCCTTTAGATCAGTTCTTCCTGGCTAA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCATACAGTGGTTGCTaGAATTCTGGGGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSYSGC*NSGVWS
Trigger: TGACCACACCCCAGAATTTCAGCAACCACTGTATGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGAGTTTCTCTGCAACTaGAGCTCTTTGAAGACACTT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGEFLCN*SSLKTL
Trigger: AAGTGTCTTCAAAGAGCTTCAGTTGCAGAGAAACTC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGGTCAGCAGTCTCCATaGCGATTTCTGTGGATTACC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGGQQSP*RFLWIT
Trigger: GGTAATCCACAGAAATCGTCATGGAGACTGCTGACC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATCTCGTCGTCTATACTaGACCTTCCAAGACCACTGC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSRRLY*TFQDHC
Trigger: GCAGTGGTCTTGGAAGGTTCAGTATAGACGACGAGA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTCTCGTCGTCTATACTaGACCTTCCAAGACCACTGC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSRRLY*TFQDHC
Trigger: GCAGTGGTCTTGGAAGGTTCAGTATAGACGACGAGA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACAGCCTGGATCTGAATaGCAGATACGTCCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGQPGSE*QIRPLE
Trigger: CTCCAAAGGACGTATCTGTCATTCAGATCCAGGCTG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACACTTGCAGAACAGCTaGTCCCAGAGCAGCAGATTC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPHLQNS*SQSSRF
Trigger: GAATCTGCTGCTCTGGGATCAGCTGTTCTGCAAGTG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGATTGGCGGGGATCCCTaGTCTGTGACTTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRIGGDP*SVTLMD
Trigger: ATCCATCAAAGTCACAGATCAGGGATCCCCGCCAAT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAATTGTCAGACATGGTaGCGGAAATGCGCACAATTG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALINCQTW*RKCAQL
Trigger: CAATTGTGCGCATTTCCGTCACCATGTCTGACAATT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGGTTGGCAATTGTTCTaGTTGCACCTGTACTGGAGT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQGWQLF*LHLYWS
Trigger: ACTCCAGTACAGGTGCAATCAGAACAATTGCCAACC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCTGTCACCTCAATGTTaGCTTCAACGGGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDILSPQC*LQRDSL
Trigger: CAGAGAGTCCCGTTGAAGTCAACATTGAGGTGACAG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCGTCTGAATGACCCCTaGGGTAGATTTTATCTTGAA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGRLNDP*GRFYLE
Trigger: TTCAAGATAAAATCTACCTCAGGGGTCATTCAGACG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCCTTGGCTAGGATGGTaGCTCCATACTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIPWLGW*LHTQCW
Trigger: CCAACATTGAGTATGGAGTCACCATCCTAGCCAAGG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATATATTCCACTGTCATaGACTGGGGAGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRYIPLS*TGEHCH
Trigger: ATGACAATGCTCCCCAGTTCATGACAGTGGAATATA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACCCCATCTACTGCTTTaGCAAAGAACGAAAGCACTG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQPHLLL*QRTKAL
Trigger: CAGTGCTTTCGTTCTTTGTCAAAGCAGTAGATGGGG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCTGTTTCCTGTTCTATaGCGAATATGCCCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALILFPVL*RICPLC
Trigger: ACAAAGGGGGCATATTCGTCATAGAACAGGAAACAG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATGTCATTCACATCACTaGCGCTCACTTCCACCATGG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLCHSHH*RSLPPW
Trigger: CCATGGTGGAAGTGAGCGTCAGTGATGTGAATGACA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCTGCTATTAGCAAAATaGCAGAGTCTCCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRLLLAK*QSLPPR
Trigger: CCTTGGTGGGAGACTCTGTCATTTTGCTAATAGCAG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACTGCTATTAGCAAAATaGCAGAGTCTCCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLLLAK*QSLPPR
Trigger: CCTTGGTGGGAGACTCTGTCATTTTGCTAATAGCAG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTTCACAATGGAAAAATaGATCTGTCCGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIFTMEK*ICPLGW
Trigger: CCAGCCCAACGGACAGATTCATTTTTCCATTGTGAA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATTGCTGGGGTTTGCCTaGATCCTTTGCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPLLGFA*ILCLDT
Trigger: TGTGTCCAGGCAAAGGATTCAGGCAAACCCCAGCAA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTGGCTGAGATGCGCATaGTATTCTCCAGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIWLRCA*YSPGVF
Trigger: GAAGACACCTGGAGAATATCATGCGCATCTCAGCCA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGACGCAGAGCTAGTTTaGAATCCTCTTCTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGDAELV*NPLLCY
Trigger: ATAGCAAAGAAGAGGATTTCAAACTAGCTCTGCGTC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATCTCCCCGTAAACTGTaGGAGACAGGTACACTGATA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSPRKL*ETGTLI
Trigger: TATCAGTGTACCTGTCTCTCACAGTTTACGGGGAGA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCAGGTGGAGATTGCAGTaGGCTGAGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIRWRLQ*AEIMPL
Trigger: CAATGGCATGATCTCAGCTCACTGCAATCTCCACCT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAGGCTGGAAAACTTGTaGAGTGTAGTGTATCCACTT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRRLENL*SVVYPL
Trigger: AAGTGGATACACTACACTTCACAAGTTTTCCAGCCT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCTGGGGGCAGGAAATaGCATGTTGGTTTTACTTTG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRPGGRK*HVGFTL
Trigger: CAAAGTAAAACCAACATGTCATTTCCTGCCCCCAGG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTATTCCCTAATTGGATaGACCTCAAAGCATGGACCA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSYSLIG*TSKHGP
Trigger: TGGTCCATGCTTTGAGGTTCATCCAATTAGGGAATA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGTGTGCAAGTTGAGGTaGATGTGCATGTATATGAAG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSVCKLR*MCMYMK
Trigger: CTTCATATACATGCACATTCACCTCAACTTGCACAC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAATTCACTTTGGTCCATaGTTCCAAATCCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRIHFGP*FQILSS
Trigger: AGAGGAGAGGATTTGGAAGCATGGACCAAAGTGAAT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACATAATCAAGCTCTTTaGTCAAGCGGATGGCACCAC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQHNQAL*SSGWHH
Trigger: GTGGTGCCATCCGCTTGAGCAAAGAGCTTGATTATG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATCTCGAGCAGTCACCTaGAGCACGCTTGTTCCAATG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSRAVT*STLVPM
Trigger: CATTGGAACAAGCGTGCTGCAGGTGACTGCTCGAGA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACTGCCTGCTGTAAACTaGTTTCTAGAAGAAACCATC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRLPAVN*FLEETI
Trigger: GATGGTTTCTTCTAGAAAGCAGTTTACAGCAGGCAG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTGCATCCAAAGGTTTTaGGATGACAATTGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSCIQRF*DDNCPN
Trigger: GTTGGGACAATTGTCATCGCAAAACCTTTGGATGCA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTGCATCCAAAGGTTTTaGGATGACAATTGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGCIQRF*DDNCPN
Trigger: GTTGGGACAATTGTCATCGCAAAACCTTTGGATGCA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATCCAGAGCCGTCACTTaGAGAACAGCTGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSRAVT*RTADPR
Trigger: TCTGGGATCAGCTGTTCTGCAAGTGACGGCTCTGGA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCATTGGAAGCCATTCCTaGCATATTGGTGGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIIGSHS*HIGGLN
Trigger: ATTCAGGCCACCAATATGGCAGGAATGGCTTCCAAT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGGCAATTGTTCTGATTaGACCTGTACTGGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRGNCSD*TCTGVH
Trigger: GTGGACTCCAGTACAGGTGCAATCAGAACAATTGCC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAGAGGCTCCATCCGCTaGTTCCGATGGTTGGACAAT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPRGSIR*FRWLDN
Trigger: ATTGTCCAACCATCGGAAGCAGCGGATGGAGCCTCT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCCAAGTACCCTAATATaGACCTGTGCAGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIPSTLI*TCAVLV
Trigger: CACCAGCACTGCACAGGTGCATATTAGGGTACTTGG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCCAAGTACCCTAATATaGACCTGTGCAGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRPSTLI*TCAVLV
Trigger: CACCAGCACTGCACAGGTGCATATTAGGGTACTTGG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCCTCAGCTACGTATGTaGTTTGTGAAAAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRPQLRM*FVKRQG
Trigger: GCCCTGCCTTTTCACAAAGCACATACGTAGCTGAGG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATCTGTGGTGATGACCTaGCCATTGCTGTCTATGAGG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSVVMT*PLLSMR
Trigger: CCTCATAGACAGCAATGGGCAGGTCATCACCACAGA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATCTGTGGTGATGACCTaGCCATTGCTGTCTATGAGG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSVVMT*PLLSMR
Trigger: CCTCATAGACAGCAATGGGCAGGTCATCACCACAGA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAACCTTCCACTCACTTTaGACCAGGCCCAGAGCAAAC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPTFHSL*TRPRAN
Trigger: GTTTGCTCTGGGCCTGGTGCAAAGTGAGTGGAAGGT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAATGTTGTACGAAGACTaGTGCTCACGGTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPMLYED*CSRSSG
Trigger: GCCACTGGACCGTGAGCAGCAGTCTTCGTACAACAT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGATGACATTGCAGGAATaGCACTGTCTACGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRMTLQE*HCLRPG
Trigger: TCCAGGCCGTAGACAGTGGCATTCCTGCAATGTCAT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGATGCTACTCTCAGTaGTCAGCGTCTGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQRCYSQ*SASGSR
Trigger: TCTACTTCCAGACGCTGAGCACTGAGAGTAGCATCT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTCCAGGGCACAATACTaGACAAAGCCATACAAGACT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALISRAQY*TKPYKT
Trigger: AGTCTTGTATGGCTTTGTGCAGTATTGTGCCCTGGA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTGCCTCTTTGATTGTTaGCAGTTTTTAATACTGCAA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLCLFDC*QFLILQ
Trigger: TTGCAGTATTAAAAACTGGCAACAATCAAAGAGGCA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAGTGAGCTGAGATCATaGCATTGCACTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSELRS*HCTLAW
Trigger: CCAGGCTAGAGTGCAATGGCATGATCTCAGCTCACT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGTGAGCTGAGATCATaGCATTGCACTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSELRS*HCTLAW
Trigger: CCAGGCTAGAGTGCAATGGCATGATCTCAGCTCACT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAATTTACCATGGCCACTaGACAGGCGGCCGTAATCTG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPIYHGH*TGGRNL
Trigger: CAGATTACGGCCGCCTGTGCAGTGGCCATGGTAAAT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTGGCATAGACTAGAATaGAGCAGCAAAATATTCATA +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLWHRLE*SSKIFI
Trigger: TATGAATATTTTGCTGCTGCATTCTAGTCTATGCCA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGTGCTTAAAAAGAACTaGTTCCATTTCCAAACACAT +
Preference number: 4 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLVLKKN*FHFQTH
Trigger: ATGTGTTTGGAAATGGAAGCAGTTCTTTTTAAGCAC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAACTGGGAATGAAAGCTaGGGAGCAGTCATTGACATC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQTGNES*GAVIDI
Trigger: GATGTCAATGACTGCTCCCCAGCTTTCATTCCCAGT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCTTTGCTCAAGCGGATaGCACCACTTGCTTTATCTA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALILCSSG*HHLLYL
Trigger: TAGATAAAGCAAGTGGTGCCATCCGCTTGAGCAAAG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCAATGGTGGAGTAGAGTaGAACAACGCCCCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDINGGVE*NNAPVC
Trigger: ACAGACAGGGGCGTTGTTCCACTCTACTCCACCATT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTGTAGACCTCAATGGTaGAGTAGAGTGGAACAACGC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRCRPQW*SRVEQR
Trigger: GCGTTGTTCCACTCTACTCCACCATTGAGGTCTACA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACTGGTAGACCTTCTCTaGGAACTGGGGCTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPLVDLL*ELGLVV
Trigger: GACAACAAGCCCCAGTTCCCAGAGAAGGTCTACCAG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATTAATCCATTCAATGTaGAGGCGGGCCGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGLIHSM*RRAVED
Trigger: ATCCTCCACGGCCCGCCTCCACATTGAATGGATTAA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTCTCATCTCTATCTGTaGCTTCAATCTGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSSHLYL*LQSAGS
Trigger: AGATCCTGCAGATTGAAGCCACAGATAGAGATGAGA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAAGCTTTGTGTAAAGTaGAGGCCGCTGTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLKLCVK*RPLSMA
Trigger: AGCCATGGACAGCGGCCTCCACTTTACACAAAGCTT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGAGGCCCACAAAGACTaGAGAATTGTCATTTATGTC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSEAHKD*RIVIYV
Trigger: GACATAAATGACAATTCTCCAGTCTTTGTGGGCCTC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCAACAGCAGCATAGTATaGGAGGCCCACAAAGACTGG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDINSSIV*EAHKDW
Trigger: CCAGTCTTTGTGGGCCTCCCATACTATGCTGCTGTT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGATGCCTTGGCCTTCTaGACTGGTGGCATTGATGCT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPDALAF*TGGIDA
Trigger: AGCATCAATGCCACCAGTCCAGAAGGCCAAGGCATC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCCCTTTGTTATTTTCTaGCCGTTCCCCATTAACTGT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGPFVIF*PFPINC
Trigger: ACAGTTAATGGGGAACGGCCAGAAAATAACAAAGGG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATTCCTGCGCGAAGACTaGTGCATTGTCATTTATATC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRFLRED*CIVIYI
Trigger: GATATAAATGACAATGCACCAGTCTTCGCGCAGGAA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAACCTGATCACACACTaGGCTATTGTCATTCACATC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRNLITH*AIVIHI
Trigger: GATGTGAATGACAATAGCCCAGTGTGTGATCAGGTT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCAACAGAGCCTTGGTaGCTGTGTTCTCATAGACAC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSTEPW*LCSHRH
Trigger: GTGTCTATGAGAACACAGCCACCAAGGCTCTGTTGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAATGGCTGTGGGCTTGTaGGTGCTTTCCTCAATGACT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGMAVGL*VLSSMT
Trigger: AGTCATTGAGGAAAGCACCCACAAGCCCACAGCCAT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGAAAGTGTTTCCTATTaGATCGCAGGATCCTCCATT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGESVSY*IAGSSI
Trigger: AATGGAGGATCCTGCGATCCAATAGGAAACACTTTC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGAAAGTGTTTCCTATTaGATCGCAGGATCCTCCATT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSESVSY*IAGSSI
Trigger: AATGGAGGATCCTGCGATCCAATAGGAAACACTTTC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATATCCAGGTTGCTCCTaGAGTCACTCTGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPYPGCS*SHSGSR
Trigger: CCTGCTTCCAGAGTGACTCCAGGAGCAACCTGGATA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCTCTTCATGAGGGGGTaGGTATTCACTGTCAATGTC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRLFMRG*VFTVNV
Trigger: GACATTGACAGTGAATACCCACCCCCTCATGAAGAG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGGGTACATGGAAAGCTaGCATAGACTAGAATGCAGC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRGYMES*HRLECS
Trigger: GCTGCATTCTAGTCTATGCCAGCTTTCCATGTACCC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACCTTTGCATAAGGTTTaGTGTGTGATGTGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRPLHKV*CVMCVQ
Trigger: TTGCACACACATCACACACCAAACCTTATGCAAAGG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTATAAATGGAATGTGTaGAGTGGAAGCCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIYKWNV*SGSPGV
Trigger: GACCCCTGGGCTTCCACTTCACACATTCCATTTATA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTATAAATGGAATGTGTaGAGTGGAAGCCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRYKWNV*SGSPGV
Trigger: GACCCCTGGGCTTCCACTTCACACATTCCATTTATA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAACACCACTCGTGGGGTaGACTGAAAAGAGATCAACT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLTPLVG*TEKRST
Trigger: AGTTGATCTCTTTTCAGTTCACCCCACGAGTGGTGT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGAAAGGAACATGAGTaGCTACATGGATTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQRKEHE*LHGLLG
Trigger: CCCCAACAATCCATGTAGTCACTCATGTTCCTTTCT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAACGAGAAAGGAACATaGGTGACTACATGGATTGTT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGNEKGT*VTTWIV
Trigger: AACAATCCATGTAGTCACTCATGTTCCTTTCTCGTT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATTAGCCAGGAAGAACTaGTCTAAAGGATCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPLARKN*SKGSPA
Trigger: GGCTGGGGATCCTTTAGATCAGTTCTTCCTGGCTAA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATCATACAGTGGTTGCTaGAATTCTGGGGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSYSGC*NSGVWS
Trigger: TGACCACACCCCAGAATTTCAGCAACCACTGTATGA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGAGTTTCTCTGCAACTaGAGCTCTTTGAAGACACTT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIEFLCN*SSLKTL
Trigger: AAGTGTCTTCAAAGAGCTTCAGTTGCAGAGAAACTC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATGTATCTGTCAAGACTaGGTAAGTCACTTCACCATT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRCICQD*VSHFTI
Trigger: AATGGTGAAGTGACTTACTCAGTCTTGACAGATACA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTATAGCTACTGGGAATaGAAGCTGGGGAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRYSYWE*KLGSSH
Trigger: ATGACTGCTCCCCAGCTTTCATTCCCAGTAGCTATA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATCCCATTATAGTCATTaGCCAAAGAATAGCGCACTT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRSHYSH*PKNSAL
Trigger: AAGTGCGCTATTCTTTGGTCAATGACTATAATGGGA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTGTGGAGGTTTTCATTaGCATCCACCACTTCCACCT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDICGGFH*HPPLPP
Trigger: AGGTGGAAGTGGTGGATGTCAATGAAAACCTCCACA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACCAAAGGTTTTGCGATaGCAATTGTCCCAACACCCT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLPKVLR*QLSQHP
Trigger: AGGGTGTTGGGACAATTGTCATCGCAAAACCTTTGG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACCTCCACATTCACAATaGCTCGGGCCAAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPPPHSQ*LGPSFF
Trigger: GAAGAAACTTGGCCCGAGTCATTGTGAATGTGGAGG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCATGGATAGGACAAACTaGCCCATCGTCGTCATGTCT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIMDRTN*PIVVMS
Trigger: AGACATGACGACGATGGGTCAGTTTGTCCTATCCAT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAATGGATAGGACAAACTaGCCCATCGTCGTCATGTCT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLMDRTN*PIVVMS
Trigger: AGACATGACGACGATGGGTCAGTTTGTCCTATCCAT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATGGCAGAGATTAGAATaGCTGATGTTCCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRWQRLE*LMFQCQ
Trigger: TTGACATTGGAACATCAGTCATTCTAATCTCTGCCA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACTGTCACCTCAATGTTaGCTTCAACGGGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPLSPQC*LQRDSL
Trigger: CAGAGAGTCCCGTTGAAGTCAACATTGAGGTGACAG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGAAGCCACTATCTATTaGTCTGACTTTCAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPREATIY*SDFQSA
Trigger: TGCACTTTGAAAGTCAGATCAATAGATAGTGGCTTC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAACCTCACTGCTCAGTaGTGGGAAGCCACTATCTAT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRNLTAQ*WEATIY
Trigger: ATAGATAGTGGCTTCCCATCACTGAGCAGTGAGGTT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACAGAGACAGACACATTaGGACTGTACAGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPQRQTH*DCTEAP
Trigger: TGGAGCCTCTGTACAGTCTCAATGTGTCTGTCTCTG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTATATTCCACTGTCATaGACTGGGGAGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIYIPLS*TGEHCH
Trigger: ATGACAATGCTCCCCAGTTCATGACAGTGGAATATA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACCCCATCTACTGCTTTaGCAAAGAACGAAAGCACTG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLPHLLL*QRTKAL
Trigger: CAGTGCTTTCGTTCTTTGTCAAAGCAGTAGATGGGG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAATGGTGTCATAGCTTaGAGTTTCAAAGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSNGVIA*SFKDWL
Trigger: AAGCCAGTCTTTGAAACTTCAAGCTATGACACCATT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGCTGTATATGCAACCTaGTCACACACTGGGCTATTG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIAVYAT*SHTGLL
Trigger: CAATAGCCCAGTGTGTGATCAGGTTGCATATACAGC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGATGATGATGCCAGATaGGCTGTCAATGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGDDDAR*AVNGED
Trigger: GTCTTCTCCATTGACAGCTCATCTGGCATCATCATC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACGACAAAATAGAGAATaGAAAGGGAGGCCCATTGTG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQRQNRE*KGRPIV
Trigger: CACAATGGGCCTCCCTTTTCATTCTCTATTTTGTCG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACATGAATCTTCCCAATaGCCCCACCAGGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGHESSQ*PHQESH
Trigger: ATGACTTTCCTGGTGGGGTCATTGGGAAGATTCATG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCTTCTCCAAGATGGCTaGGATGCGCATGATATTCTC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDILLQDG*DAHDIL
Trigger: GAGAATATCATGCGCATCTCAGCCATCTTGGAGAAG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTTATATGGCATTTCATaGATAGGCAGGCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALILYGIS*IGRPRV
Trigger: TACCCTTGGCCTGCCTATTCATGAAATGCCATATAA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAAAGCTTTGCAGTACTaGTCACTCCATTGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIKALQY*SLHCSH
Trigger: ATGGGAACAATGGAGTGAGCAGTACTGCAAAGCTTT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATGGGGTGTGGTCATTTaGATCTTCTATGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQWGVVI*IFYADG
Trigger: ACCATCAGCATAGAAGATGCAAATGACCACACCCCA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAATAGACATGGGGTCTaGAAGATTCTCTCCATCAGT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALINRHGV*KILSIS
Trigger: ACTGATGGAGAGAATCTTGCAGACCCCATGTCTATT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAGAAAATGTTCTGCCTaGTGTTCTCGATCCAATTTC +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSRKCSA*CSRSNF
Trigger: GAAATTGGATCGAGAACAGCAGGCAGAACATTTTCT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACTCATCTCTATCAAATaGAAAAGCCCTGTAAATCGG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRLISIK*KSPVNR
Trigger: CCGATTTACAGGGCTTTTGCATTTGATAGAGATGAG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACCCAACACCCTTCTCTaGATCAAAAGCGCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGPNTLL*IKSAVK
Trigger: TTTGACAGCGCTTTTGATGCAGAGAAGGGTGTTGGG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATCTGTGGCTTCAATCTaGAGGATCTCCGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSVASI*RISVSG
Trigger: TCCAGACACGGAGATCCTGCAGATTGAAGCCACAGA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGTTCCCAGTGTTCCCTaGTTCTATGGTATATATGAG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIVPSVP*FYGIYE
Trigger: CTCATATATACCATAGAAGCAGGGAACACTGGGAAC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACAGCCTCACTTAGGCTaGCTGAGTATTGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQQPHLG*LSIEKR
Trigger: TCTTTTCTCAATACTCAGGCAGCCTAAGTGAGGCTG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAATTACCTTTGTTCCTaGAGCCACGTTCTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQNYLCS*SHVLSH
Trigger: GTGAGAGAGAACGTGGCTGCAGGAACAAAGGTAATT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACAGGGGTATAGTGGCTaGTACTTTAAAGTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQQGYSG*YFKVES
Trigger: GCTTTCCACTTTAAAGTAGCAGCCACTATACCCCTG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAATGGTGACAGTGTTCTaGAGCATCTCATGCACCAAC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGMVTVF*SISCTN
Trigger: GTTGGTGCATGAGATGCTGCAGAACACTGTCACCAT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCTGGAACCACAGCTTaGCATCCACAATCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLAGTTA*HPQSSE
Trigger: TTCTGAAGATTGTGGATGGCAAGCTGTGGTTCCAGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGAACTTCAGAGTTGCTaGCTTTATTACTACCTGCAA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGELQSC*LYYYLQ
Trigger: TTGCAGGTAGTAATAAAGGCAGCAACTCTGAAGTTC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGAACTTCAGAGTTGCTaGCTTTATTACTACCTGCAA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRELQSC*LYYYLQ
Trigger: TTGCAGGTAGTAATAAAGGCAGCAACTCTGAAGTTC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCACTGAACTTCAGAGTTaGTGCCTTTATTACTACCTG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSTELQS*CLYYYL
Trigger: CAGGTAGTAATAAAGGCAGCAACTCTGAAGTTCAGT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAACTGGAATCAAGCTTaGTTGTTGGGACAGTATGAC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALINWNQA*LLGQYD
Trigger: GTCATACTGTCCCAACAAGCAAGCTTGATTCCAGTT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAGCAGCCTTACTGAGTaGAAGCACATATTTGTACAT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSSLTE*KHIFVH
Trigger: ATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATTGAAAGGTATGCCATaGTCGCCGGCAGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLKGMP*SPAEFS
Trigger: TGAAAATTCTGCCGGCGAGCATGGCATACCTTTCAA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATCTCCCTCAAAGAGATaGTGTGTAAGCAGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSPSKR*CVSSRD
Trigger: GTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGTTACCTCAAAAGTTTaGAGACCAACAGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRVTSKV*RPTAWM
Trigger: CATCCACGCTGTTGGTCTGCAAACTTTTGAGGTAAC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTCTGTTGCAGTCACCTaGGCAACACTAGTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDISVAVT*ATLVLR
Trigger: TCTAAGGACTAGTGTTGCCCAGGTGACTGCAACAGA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAGTAGAATTCTCCATTaGAACCAATATCTGCGTCTG +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSRILH*NQYLRL
Trigger: CAGACGCAGATATTGGTTCCAATGGAGAATTCTACT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGATCCCCAGCCACAATaGAAACAGATTCGATCTCTC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGDPQPQ*KQIRSL
Trigger: GAGAGATCGAATCTGTTTCCATTGTGGCTGGGGATC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATCTCTGCCTTGTCCCTaGCTTCTATTTTCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRSLPCP*LLFSKN
Trigger: ATTCTTTGAAAATAGAAGCCAGGGACAAGGCAGAGA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAACTGGGAATGAAAGCTaGGGAGCAGTCATTGACATC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGTGNES*GAVIDI
Trigger: GATGTCAATGACTGCTCCCCAGCTTTCATTCCCAGT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCCAAGATCTGGATCATaGGTCTCAAGCCAAGCAATG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIPRSGS*VSSQAM
Trigger: CATTGCTTGGCTTGAGACCCATGATCCAGATCTTGG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTGTAGACCTCAATGGTaGAGTAGAGTGGAACAACGC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDICRPQW*SRVEQR
Trigger: GCGTTGTTCCACTCTACTCCACCATTGAGGTCTACA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGACAGATACGTCCTTTaGAGAGTTTTCCATGACAAC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIDRYVL*RVFHDN
Trigger: GTTGTCATGGAAAACTCTCCAAAGGACGTATCTGTC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTGGGCAATGGTTTCATaGTCCAGGTTGGCAATTGTT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRWAMVS*SRLAIV
Trigger: AACAATTGCCAACCTGGACCATGAAACCATTGCCCA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAATATATATGATGCCTTaGCCTTCTGGACTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQIYMMP*PSGLVA
Trigger: TGCCACCAGTCCAGAAGGCCAAGGCATCATATATAT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCACCAGACATTCTGACTaGGCAAAATCCTCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDITRHSD*AKSSGC
Trigger: ACACCCTGAGGATTTTGCCCAGTCAGAATGTCTGGT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTTCCTGCGCGAAGACTaGTGCATTGTCATTTATATC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIFLRED*CIVIYI
Trigger: GATATAAATGACAATGCACCAGTCTTCGCGCAGGAA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATCCTCCAGGATTAGGTaGATGTTGGACTGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSSRIR*MLDWQN
Trigger: GTTCTGCCAGTCCAACATCCACCTAATCCTGGAGGA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTCAACAGAGCCTTGGTaGCTGTGTTCTCATAGACAC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDISTEPW*LCSHRH
Trigger: GTGTCTATGAGAACACAGCCACCAAGGCTCTGTTGA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAATGAATCTGTCCGTTaGGCTGGCTGTCTACATCTT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRNESVR*AGCLHL
Trigger: AAGATGTAGACAGCCAGCCCAACGGACAGATTCATT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAAAGCCATACAAGACTaGCTGTATAACTTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRKAIQD*LYNLVG
Trigger: ACCCACTAAGTTATACAGCCAGTCTTGTATGGCTTT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAAAGCCATACAAGACTaGCTGTATAACTTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGKAIQD*LYNLVG
Trigger: ACCCACTAAGTTATACAGCCAGTCTTGTATGGCTTT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGTCACAGCAAAGGGTaGGCACAATTTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRGHSKG*AQFSSV
Trigger: CACTGAAGAAAATTGTGCCCACCCTTTGCTGTGACC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGGTCACAGCAAAGGGTaGGCACAATTTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIGHSKG*AQFSSV
Trigger: CACTGAAGAAAATTGTGCCCACCCTTTGCTGTGACC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCCAAAGAAGGAATGGTaGAAGTCAGAGGGTCCATCA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIPKKEW*KSEGPS
Trigger: TGATGGACCCTCTGACTTCCACCATTCCTTCTTTGG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGCCTACAACAGATTATaGGAAATGGCTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRAYNRL*EMASRR
Trigger: CCTCCTGGAAGCCATTTCCCATAATCTGTTGTAGGC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGCCTACAACAGATTATaGGAAATGGCTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGAYNRL*EMASRR
Trigger: CCTCCTGGAAGCCATTTCCCATAATCTGTTGTAGGC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGGGTACATGGAAAGCTaGCATAGACTAGAATGCAGC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIGYMES*HRLECS
Trigger: GCTGCATTCTAGTCTATGCCAGCTTTCCATGTACCC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACCAAATCCTCTCCTCTaGCAGAACCTTTTACTATCA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQPNPLL*QNLLLS
Trigger: TGATAGTAAAAGGTTCTGTCAGAGGAGAGGATTTGG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGAGTATGTTGTGGGTaGAAACAAAGGTCTCAGATC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQRVCCG*KQRSQI
Trigger: GATCTGAGACCTTTGTTTTCACCCACAACATACTCT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACTTTTGCTTGAAGAGTaGGATTGTAGCCATAGGGAA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLLLEE*DCSHRE
Trigger: TTCCCTATGGCTACAATCTCACTCTTCAAGCAAAAG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCATAGCACTTTTCCATTaGAGCCAGAGTCGGCATCAT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIIALFH*SQSRHH
Trigger: ATGATGCCGACTCTGGCTTCAATGGAAAAGTGCTAT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTTCAGTACCAATGCCTaGACTTTCAAGAATGTTAAC +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGFSTNA*TFKNVN
Trigger: GTTAACATTCTTGAAAGTTCAGGCATTGGTACTGAA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATGGCTTCCACTTGAATaGTTTCAGTACCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGWLPLE*FQYQCL
Trigger: CAGGCATTGGTACTGAAATCATTCAAGTGGAAGCCA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTGGCTTCCACTTGAATaGTTTCAGTACCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIWLPLE*FQYQCL
Trigger: CAGGCATTGGTACTGAAATCATTCAAGTGGAAGCCA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATTCCAGTTGAGCTATTaGTGGCAAACTGCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQFQLSY*WQTAVY
Trigger: ATACACAGCAGTTTGCCATCAATAGCTCAACTGGAA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATATAGCTACTGGGAATaGAAGCTGGGGAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPYSYWE*KLGSSH
Trigger: ATGACTGCTCCCCAGCTTTCATTCCCAGTAGCTATA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATGTGGAGGTTTTCATTaGCATCCACCACTTCCACCT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPCGGFH*HPPLPP
Trigger: AGGTGGAAGTGGTGGATGTCAATGAAAACCTCCACA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCTTGTTCCAATGCGTaGGTTTTCCTTTACAGATCC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLACSNA*VFLYRS
Trigger: GGATCTGTAAAGGAAAACTCACGCATTGGAACAAGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCATAATATATAGGTTCTaGGGTCAGCGGGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIIIYRF*GQRGIV
Trigger: GACAATGCCCCGCTGACCTCAGAACCTATATATTAT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATCTTCAGCCTGGATCTaGATGACAGATACGTCCTTT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSSAWI*MTDTSF
Trigger: AAAGGACGTATCTGTCATTCAGATCCAGGCTGAAGA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTCTTCAGCCTGGATCTaGATGACAGATACGTCCTTT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDISSAWI*MTDTSF
Trigger: AAAGGACGTATCTGTCATTCAGATCCAGGCTGAAGA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTTTTCATCTAGAACCTaGACCACCACCCAAATGGTT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRFSSRT*TTTQMV
Trigger: AACCATTTGGGTGGTGGTTCAGGTTCTAGATGAAAA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGGTCAATGGTATAGGTaGAGGGGGTGGTTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIGQWYR*RGWFLN
Trigger: ATTAAGAAACCACCCCCTTCACCTATACCATTGACC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGGTCAATGGTATAGGTaGAGGGGGTGGTTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGGQWYR*RGWFLN
Trigger: ATTAAGAAACCACCCCCTTCACCTATACCATTGACC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACATTTGTCCCATCGGTaGCTTCCACACTCATATTAT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQHLSHR*LPHSYY
Trigger: ATAATATGAGTGTGGAAGTCACCGATGGGACAAATG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGGTAGTCTTTGTGAATaGACTTGGGGTGAGAATTGT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRGSLCE*TWGENC
Trigger: ACAATTCTCACCCCAAGTTCATTCACAAAGACTACC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGTTGACTCCACAATCTaGTACACAAGCAGAGCATTC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRVDSTI*YTSRAF
Trigger: GAATGCTCTGCTTGTGTATCAGATTGTGGAGTCAAC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGTCTCAAACACAGCCTaGGTAAAAACAGGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGVSNTA*VKTGGL
Trigger: TAACCCACCTGTTTTTACTCAGGCTGTGTTTGAGAC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGTCTCAAACACAGCCTaGGTAAAAACAGGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRVSNTA*VKTGGL
Trigger: TAACCCACCTGTTTTTACTCAGGCTGTGTTTGAGAC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTACGTATGTGCTTTGTaGAAAGGCAGGGCTGTACAA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRYVCAL*KGRAVQ
Trigger: TTGTACAGCCCTGCCTTTTCACAAAGCACATACGTA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTACGTATGTGCTTTGTaGAAAGGCAGGGCTGTACAA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIYVCAL*KGRAVQ
Trigger: TTGTACAGCCCTGCCTTTTCACAAAGCACATACGTA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTCTGTGGCTCGAACATaGATTACCTTTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSVART*ITFVPA
Trigger: TGCAGGAACAAAGGTAATTCATGTTCGAGCCACAGA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGGAATAAGTAATCCTTaGATTTGCTCCATCATCGGG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRGISNP*ICSIIG
Trigger: CCCGATGATGGAGCAAATTCAAGGATTACTTATTCC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGGAATAAGTAATCCTTaGATTTGCTCCATCATCGGG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQGISNP*ICSIIG
Trigger: CCCGATGATGGAGCAAATTCAAGGATTACTTATTCC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAATACTGAGACTGGGTaGATGATGGCAAGAACGTTT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQNTETG*MMARTF
Trigger: AAACGTTCTTGCCATCATTCACCCAGTCTCAGTATT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGCTGTATATGCAACCTaGTCACACACTGGGCTATTG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPAVYAT*SHTGLL
Trigger: CAATAGCCCAGTGTGTGATCAGGTTGCATATACAGC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATTCACAATGGAAAAATaGATCTGTCCGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLFTMEK*ICPLGW
Trigger: CCAGCCCAACGGACAGATTCATTTTTCCATTGTGAA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATCTCCCCGTAAACTGTaGGAGACAGGTACACTGATA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSPRKL*ETGTLI
Trigger: TATCAGTGTACCTGTCTCTCACAGTTTACGGGGAGA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGAAGTACCCAAGATGTaGTGTCTACACTTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIREVPKM*CLHLSL
Trigger: CAGACTCAAGTGTAGACATCACATCTTGGGTACTTC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGAAGTACCCAAGATGTaGTGTCTACACTTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLEVPKM*CLHLSL
Trigger: CAGACTCAAGTGTAGACATCACATCTTGGGTACTTC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTGTAGAGAAGCTATATaGACAAAGCCAACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGCREAI*TKPTSV
Trigger: TACAGAAGTTGGCTTTGTTCATATAGCTTCTCTACA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCATTATGAAGAATTGTaGTTATCTAGGCCGCAAACT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGHYEEL*LSRPQT
Trigger: AGTTTGCGGCCTAGATAATCACAATTCTTCATAATG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAAAAATATGTCTGAGTaGATAATGCACAGACTAGGG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRKNMSE*IMHRLG
Trigger: CCCTAGTCTGTGCATTATTCACTCAGACATATTTTT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGGCTGGAAAACTTGTaGAGTGTAGTGTATCCACTT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQRLENL*SVVYPL
Trigger: AAGTGGATACACTACACTTCACAAGTTTTCCAGCCT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTGGATAATACCTCCATaGGTAGGTCTGACCAAGAGA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIWIIPP*VGLTKR
Trigger: TCTCTTGGTCAGACCTACTCATGGAGGTATTATCCA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGAATAATGTGCAGTTaGACACTGTGGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQRIMCS*TLWDTN
Trigger: GTTTGTGTCCCACAGTGTTCAACTGCACATTATTCT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACAAACACGCTCCAAATaGCTCTACGATTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGQTRSK*LYDSQV
Trigger: CACTTGAGAATCGTAGAGTCATTTGGAGCGTGTTTG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGTGTGCAAGTTGAGGTaGATGTGCATGTATATGAAG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQVCKLR*MCMYMK
Trigger: CTTCATATACATGCACATTCACCTCAACTTGCACAC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAATAAGGTTTGGTGTGTaGTGTGTGTGCAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLIRFGV*CVCKLR
Trigger: CCTCAACTTGCACACACATCACACACCAAACCTTAT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCATAAGGTTTGGTGTGTaGTGTGTGTGCAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIIRFGV*CVCKLR
Trigger: CCTCAACTTGCACACACATCACACACCAAACCTTAT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCATTGGAACCAATATCTaGGTCTGTTGCAGTCACCTG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIIGTNI*VCCSHL
Trigger: CAGGTGACTGCAACAGACGCAGATATTGGTTCCAAT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAAAGCTTTGCAGTACTaGTCACTCCATTGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQKALQY*SLHCSH
Trigger: ATGGGAACAATGGAGTGAGCAGTACTGCAAAGCTTT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGGGCATGTTCATTTATaGGCTCAATGTGAACATAAA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRGHVHL*AQCEHK
Trigger: TTTATGTTCACATTGAGCGCATAAATGAACATGCCC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGGGCATGTTCATTTATaGGCTCAATGTGAACATAAA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGGHVHL*AQCEHK
Trigger: TTTATGTTCACATTGAGCGCATAAATGAACATGCCC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTGTCTCTTGTGGGGTTaGCAATGTAGACTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRCLLWG*QCRLPL
Trigger: TAAAGGCAGTCTACATTGGCAACCCCACAAGAGACA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGCACGCTTGTTCCAATaGGTGAGTTTTCCTTTACAG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIARLFQ*VSFPLQ
Trigger: CTGTAAAGGAAAACTCACGCATTGGAACAAGCGTGC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCTGCCTGCTGTAAACTaGTTTCTAGAAGAAACCATC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRLPAVN*FLEETI
Trigger: GATGGTTTCTTCTAGAAAGCAGTTTACAGCAGGCAG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAATTATGTTGAGAATGTaGTTGTCCTGGGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGIMLRM*LSWASW
Trigger: CCATGAGGCCCAGGACAAGCACATTCTCAACATAAT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGTTGATAAGAGGATGTaGGCTCATAATCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPVDKRM*AHNPGP
Trigger: AGGCCCTGGATTATGAGCGCACATCCTCTTATCAAC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCAGCCTCACTTAGGCTaGCTGAGTATTGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIQPHLG*LSIEKR
Trigger: TCTTTTCTCAATACTCAGGCAGCCTAAGTGAGGCTG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTTCCTGGGTTTAAGATaGTGTATTTTAAGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSFLGLR*CILRAH
Trigger: ATGAGCCCTTAAAATACAGCATCTTAAACCCAGGAA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAAAATCAGAGCTGTCTaGATCAGAGGCTTGTACACA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRKIRAV*IRGLYT
Trigger: TGTGTACAAGCCTCTGATGCAGACAGCTCTGATTTT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAATGGCTGTATCTTCTaGAATGGTAAAGGAATACTG +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRNGCIF*NGKGIL
Trigger: CAGTATTCCTTTACCATTGCAGAAGATACAGCCATT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACAGGGGTATAGTGGCTaGTACTTTAAAGTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLQGYSG*YFKVES
Trigger: GCTTTCCACTTTAAAGTAGCAGCCACTATACCCCTG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACTGCGCGAAGACTGGTaGATTGTCATTTATATCTGT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLREDW*IVIYIC
Trigger: ACAGATATAAATGACAATGCACCAGTCTTCGCGCAG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACCAGGTAAAACCTTTTaGATAATTCATAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRPGKTF*IIHSPG
Trigger: TCCTGGACTATGAATTATGCAAAAGGTTTTACCTGG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAAACTTGCTGGGGTTTaGCTGAATCCTTTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPKLAGV*LNPLPG
Trigger: TCCAGGCAAAGGATTCAGGCAAACCCCAGCAAGTTT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAATGGTGACAGTGTTCTaGAGCATCTCATGCACCAAC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPMVTVF*SISCTN
Trigger: GTTGGTGCATGAGATGCTGCAGAACACTGTCACCAT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGATAATCCCATTGCTTTaGAGTGTTCGAAGACGCAGA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRIIPLL*SVRRRR
Trigger: TCTGCGTCTTCGAACACTGCAAAGCAATGGGATTAT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGCCTTTATTACTACCTaGAAAGCAGGTCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIAFITT*KAGHFS
Trigger: GGAGAAGTGACCTGCTTTGCAGGTAGTAATAAAGGC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGCCTTTATTACTACCTaGAAAGCAGGTCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRAFITT*KAGHFS
Trigger: GGAGAAGTGACCTGCTTTGCAGGTAGTAATAAAGGC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCCTTTATTACTACCTaGAAAGCAGGTCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLAFITT*KAGHFS
Trigger: GGAGAAGTGACCTGCTTTGCAGGTAGTAATAAAGGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAACTGGAATCAAGCTTaGTTGTTGGGACAGTATGAC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQNWNQA*LLGQYD
Trigger: GTCATACTGTCCCAACAAGCAAGCTTGATTCCAGTT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAACTGGAATCAAGCTTaGTTGTTGGGACAGTATGAC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRNWNQA*LLGQYD
Trigger: GTCATACTGTCCCAACAAGCAAGCTTGATTCCAGTT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACAGTGGCTTCATGACTaGATTAGGATCTATTTATTC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRQWLHD*IRIYLF
Trigger: GAATAAATAGATCCTAATGCAGTCATGAAGCCACTG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGCTGCAGAGCTATTCTaGAGAAAATCAGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGAAELF*RKSGDD
Trigger: ATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGCAATACTAGTAAAGTaGCTACAACAGATTATGGGA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRAILVK*LQQIMG
Trigger: TCCCATAATCTGTTGTAGGCACTTTACTAGTATTGC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCTTAACAGTATTCAGTaGCCGTGCTGTAACAATCAG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRLNSIQ*PCCNNQ
Trigger: CTGATTGTTACAGCACGGCCACTGAATACTGTTAAG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATGGTTGCTGAAATTCTaGGGTGTGGTCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGWLLKF*GVVICI
Trigger: GATGCAAATGACCACACCCCAGAATTTCAGCAACCA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAATGTTAGCACCAACTaGCAGATCCTCCTTTACAGC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLNVSTN*QILLYS
Trigger: GCTGTAAAGGAGGATCTGCCAGTTGGTGCTAACATT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACCAAGATCTGGATCATaGGTCTCAAGCCAAGCAATG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPPRSGS*VSSQAM
Trigger: CATTGCTTGGCTTGAGACCCATGATCCAGATCTTGG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCTTTGCTCAAGCGGATaGCACCACTTGCTTTATCTA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDILCSSG*HHLLYL
Trigger: TAGATAAAGCAAGTGGTGCCATCCGCTTGAGCAAAG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCACCTTCTCTGGGAACTaGGGCTTGTTGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDITFSGN*GLLSFS
Trigger: TGAAAATGACAACAAGCCCCAGTTCCCAGAGAAGGT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATCTCATCTCTATCTGTaGCTTCAATCTGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSHLYL*LQSAGS
Trigger: AGATCCTGCAGATTGAAGCCACAGATAGAGATGAGA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCATCGTCGTCATGTCTaGTTCTTTGCAAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRHRRHV*FFANGD
Trigger: ATCACCATTTGCAAAGAACCAGACATGACGACGATG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGATGACTCCAGAATATaGATTTATGGTAAAGATCCC +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRDDSRI*IYGKDP
Trigger: GGGATCTTTACCATAAATCCATATTCTGGAGTCATC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAATGGAAATGGGCAATaGTTTCATGGTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGNGNGQ*FHGPGW
Trigger: CCAACCTGGACCATGAAACCATTGCCCATTTCCATT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTGTTGTACTAACTCATaGTCCAGCATTCGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDICCTNS*SSIRAV
Trigger: GACAGCACGAATGCTGGACCATGAGTTAGTACAACA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAATCCGCTGCTTCCGATaGTTGGACAATGTGATAACT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGIRCFR*LDNVIT
Trigger: AGTTATCACATTGTCCAACCATCGGAAGCAGCGGAT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACCACTGTACTCCCAATaGCTGTATCTTCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPPLYSQ*LYLLQW
Trigger: CCATTGCAGAAGATACAGCCATTGGGAGTACAGTGG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGCTGCTACTTTAAAGTaGAAAGCTGGGCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGAATLK*KAGLVS
Trigger: TGAAACCAGCCCAGCTTTCCACTTTAAAGTAGCAGC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATGGTCAACAGAGCCTTaGTGGCTGTGTTCTCATAGA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPWSTEP*WLCSHR
Trigger: TCTATGAGAACACAGCCACCAAGGCTCTGTTGACCA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAATGAATCTGTCCGTTaGGCTGGCTGTCTACATCTT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGNESVR*AGCLHL
Trigger: AAGATGTAGACAGCCAGCCCAACGGACAGATTCATT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACCTGAATCCTTTGCCTaGACACACAACACGTATTCC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPPESFA*THNTYS
Trigger: GGAATACGTGTTGTGTGTCCAGGCAAAGGATTCAGG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGAAAGTGTTTCCTATTaGATCGCAGGATCCTCCATT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQESVSY*IAGSSI
Trigger: AATGGAGGATCCTGCGATCCAATAGGAAACACTTTC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATCTCGTAGTCACTCATaGCTACTTCGGAATCGTCAA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSRSHS*LLRNRQ
Trigger: TTGACGATTCCGAAGTAGCCATGAGTGACTACGAGA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTCATTTTCACCCAACTaGAATCAAGCTTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALISFSPN*NQACLL
Trigger: CAACAAGCAAGCTTGATTCCAGTTGGGTGAAAATGA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTGTCATCAGAAACTGTaGACACAGATTTGCTCATTA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGCHQKL*TQICSL
Trigger: TAATGAGCAAATCTGTGTCCACAGTTTCTGATGACA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCACCTAGTAGCATCTTaGCCTGACTGCAAAGCATTT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIHLVAS*PDCKAF
Trigger: AAATGCTTTGCAGTCAGGCCAAGATGCTACTAGGTG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCATTTATTCCCTAATTaGATGAACCTCAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSHLFPN*MNLKAW
Trigger: CCATGCTTTGAGGTTCATCCAATTAGGGAATAAATG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTGCAGACCAACAGCGTaGATGACTTACAATTATATT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGCRPTA*MTYNYI
Trigger: AATATAATTGTAAGTCATCCACGCTGTTGGTCTGCA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGAGTATGTTGTGGGTaGAAACAAAGGTCTCAGATC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRVCCG*KQRSQI
Trigger: GATCTGAGACCTTTGTTTTCACCCACAACATACTCT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCTTTTGCTTGAAGAGTaGGATTGTAGCCATAGGGAA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRLLLEE*DCSHRE
Trigger: TTCCCTATGGCTACAATCTCACTCTTCAAGCAAAAG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCCCATTATAGTCATTaGCCAAAGAATAGCGCACTT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSHYSH*PKNSAL
Trigger: AAGTGCGCTATTCTTTGGTCAATGACTATAATGGGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAATAATATATAGGTTCTaGGGTCAGCGGGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPIIYRF*GQRGIV
Trigger: GACAATGCCCCGCTGACCTCAGAACCTATATATTAT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGGTAGTCTTTGTGAATaGACTTGGGGTGAGAATTGT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGGSLCE*TWGENC
Trigger: ACAATTCTCACCCCAAGTTCATTCACAAAGACTACC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATGGCAGAGATTAGAATaGCTGATGTTCCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQWQRLE*LMFQCQ
Trigger: TTGACATTGGAACATCAGTCATTCTAATCTCTGCCA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGTTGACTCCACAATCTaGTACACAAGCAGAGCATTC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPVDSTI*YTSRAF
Trigger: GAATGCTCTGCTTGTGTATCAGATTGTGGAGTCAAC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCGTCTGAATGACCCCTaGGGTAGATTTTATCTTGAA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRRLNDP*GRFYLE
Trigger: TTCAAGATAAAATCTACCTCAGGGGTCATTCAGACG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGAAGCCACTATCTATTaGTCTGACTTTCAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHREATIY*SDFQSA
Trigger: TGCACTTTGAAAGTCAGATCAATAGATAGTGGCTTC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACTGTTTCCTGTTCTATaGCGAATATGCCCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPLFPVL*RICPLC
Trigger: ACAAAGGGGGCATATTCGTCATAGAACAGGAAACAG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTCCAGATCCATAGAGTaGGTATCGTATATATCCATT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALISRSIE*VSYISI
Trigger: AATGGATATATACGATACTCACTCTATGGATCTGGA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGACGCAGAGCTAGTTTaGAATCCTCTTCTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRDAELV*NPLLCY
Trigger: ATAGCAAAGAAGAGGATTTCAAACTAGCTCTGCGTC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACTTGTTGGGACAGTATaGCTTGTGAAGAAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLVGTV*LVKKFL
Trigger: TAGAAACTTCTTCACAAGTCATACTGTCCCAACAAG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGGCTGGAAAACTTGTaGAGTGTAGTGTATCCACTT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRLENL*SVVYPL
Trigger: AAGTGGATACACTACACTTCACAAGTTTTCCAGCCT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATATTCCCTAATTGGATaGACCTCAAAGCATGGACCA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGYSLIG*TSKHGP
Trigger: TGGTCCATGCTTTGAGGTTCATCCAATTAGGGAATA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGAATAATGTGCAGTTaGACACTGTGGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRIMCS*TLWDTN
Trigger: GTTTGTGTCCCACAGTGTTCAACTGCACATTATTCT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGACCAACAGCGTGGATaGCTTACAATTATATTCGAC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGDQQRG*LTIIFD
Trigger: GTCGAATATAATTGTAAGTCATCCACGCTGTTGGTC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGTGTGCAAGTTGAGGTaGATGTGCATGTATATGAAG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIVCKLR*MCMYMK
Trigger: CTTCATATACATGCACATTCACCTCAACTTGCACAC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAACATTGTTGACAAGCTaGATGACAGTCACTATGGAG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLTLLTS*MTVTME
Trigger: CTCCATAGTGACTGTCATTCAGCTTGTCAACAATGT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATCTGTCCTTGGTCCATaGCAGACACTTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSVLGP*QTLHSL
Trigger: TAGAGAATGAAGTGTCTGTCATGGACCAAGGACAGA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAATGATGACTTCCTCTaGTTTGAAAAAGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRNDDFL*FEKAFL
Trigger: GAGGAAGGCTTTTTCAAAGCAGAGGAAGTCATCATT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAATCAACTGTCACCACTaGATATGTTGGCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQINCHH*ICWLFF
Trigger: GAAAAAGAGCCAACATATGCAGTGGTGACAGTTGAT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATGTCTCTTGTGGGGTTaGCAATGTAGACTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPCLLWG*QCRLPL
Trigger: TAAAGGCAGTCTACATTGGCAACCCCACAAGAGACA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAATTCTCTCCATCAGTTaGTGTAATTCTGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQILSIS*CNSEGK
Trigger: TTTGCCCTCAGAATTACAGCAACTGATGGAGAGAAT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGATGTCATAACTGCCTaGTGTAAACTGCTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRDVITA*CKLLSR
Trigger: TCTAGAAAGCAGTTTACAGCAGGCAGTTATGACATC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGATGTCATAACTGCCTaGTGTAAACTGCTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQDVITA*CKLLSR
Trigger: TCTAGAAAGCAGTTTACAGCAGGCAGTTATGACATC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAATTATGTTGAGAATGTaGTTGTCCTGGGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPIMLRM*LSWASW
Trigger: CCATGAGGCCCAGGACAAGCACATTCTCAACATAAT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGTTCCCAGTGTTCCCTaGTTCTATGGTATATATGAG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIVPSVP*FYGIYE
Trigger: CTCATATATACCATAGAAGCAGGGAACACTGGGAAC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCATTCCCAGATAAAATaGTATATTCCAACCGGTCAA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIHSQIK*YIPTGQ
Trigger: TTGACCGGTTGGAATATAGCATTTTATCTGGGAATG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAATGGCTGTATCTTCTaGAATGGTAAAGGAATACTG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALINGCIF*NGKGIL
Trigger: CAGTATTCCTTTACCATTGCAGAAGATACAGCCATT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGCTGTCAATATTGAATaGTTCCATTACCTTTTCGGG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQAVNIE*FHYLFG
Trigger: CCCGAAAAGGTAATGGAAGCATTCAATATTGACAGC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACTGCGCGAAGACTGGTaGATTGTCATTTATATCTGT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLLREDW*IVIYIC
Trigger: ACAGATATAAATGACAATGCACCAGTCTTCGCGCAG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTTAAATAAGCTTTTCTaGTCCGATTTCAGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSLNKLF*SDFRAN
Trigger: ATTTGCCCTGAAATCGGAGCAGAAAAGCTTATTTAA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTTAAATAAGCTTTTCTaGTCCGATTTCAGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGLNKLF*SDFRAN
Trigger: ATTTGCCCTGAAATCGGAGCAGAAAAGCTTATTTAA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAACTGAACTTCAGAGTTaGTGCCTTTATTACTACCTG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQTELQS*CLYYYL
Trigger: CAGGTAGTAATAAAGGCAGCAACTCTGAAGTTCAGT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATGCCTCTTTGATTGTTaGCAGTTTTTAATACTGCAA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRCLFDC*QFLILQ
Trigger: TTGCAGTATTAAAAACTGGCAACAATCAAAGAGGCA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAATTACATGCAACAATaGCTCTTTGATTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALINYMQQ*LFDCCQ
Trigger: CTGGCAACAATCAAAGAGGCATTGTTGCATGTAATT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCAGTGGCTTCATGACTaGATTAGGATCTATTTATTC +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIQWLHD*IRIYLF
Trigger: GAATAAATAGATCCTAATGCAGTCATGAAGCCACTG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATGGTATATATTTAGCTaGAGAGCTATTCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRWYIFS*RAILQK
Trigger: TTTCTGCAGAATAGCTCTGCAGCTAAATATATACCA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATTACTCCCAAGTTCTTaGTTACTATATGACGAGCAC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLLPSS*LLYDEH
Trigger: GTGCTCGTCATATAGTAAGCAAGAACTTGGGAGTAA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTGGCATAGACTAGAATaGAGCAGCAAAATATTCATA +
Preference number: 4 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGWHRLE*SSKIFI
Trigger: TATGAATATTTTGCTGCTGCATTCTAGTCTATGCCA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTCTACGATTCTCAAGTaGATTCTAAACACTAGAAGA +
Preference number: 4 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSSTILK*ILNTRR
Trigger: TCTTCTAGTGTTTAGAATGCACTTGAGAATCGTAGA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATCTACGATTCTCAAGTaGATTCTAAACACTAGAAGA +
Preference number: 4 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRSTILK*ILNTRR
Trigger: TCTTCTAGTGTTTAGAATGCACTTGAGAATCGTAGA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGTTACCTCAAAAGTTTaGAGACCAACAGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPVTSKV*RPTAWM
Trigger: CATCCACGCTGTTGGTCTGCAAACTTTTGAGGTAAC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGACTACATGGATTGTTaGGGCATGTTCATTTATGCG +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRDYMDC*GMFIYA
Trigger: CGCATAAATGAACATGCCCCAACAATCCATGTAGTC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGACTACATGGATTGTTaGGGCATGTTCATTTATGCG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGDYMDC*GMFIYA
Trigger: CGCATAAATGAACATGCCCCAACAATCCATGTAGTC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACACCACTGCATATGTTaGCTCTTTTTCCAACGAGAA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLHHCIC*LFFQRE
Trigger: TTCTCGTTGGAAAAAGAGCCAACATATGCAGTGGTG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACTTAACAGTATTCAGTaGCCGTGCTGTAACAATCAG +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLLNSIQ*PCCNNQ
Trigger: CTGATTGTTACAGCACGGCCACTGAATACTGTTAAG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAATAAGCATCATACAGTaGTTGCTGAAATTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQISIIQ*LLKFWG
Trigger: ACCCCAGAATTTCAGCAACCACTGTATGATGCTTAT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAAGAATAATTGGCTTTaGATTCCCGGTCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLKNNWL*IPGPTG
Trigger: ACCAGTTGGACCGGGAATCCAAAGCCAATTATTCTT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGACAGATACGTCCTTTaGAGAGTTTTCCATGACAAC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGDRYVL*RVFHDN
Trigger: GTTGTCATGGAAAACTCTCCAAAGGACGTATCTGTC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCACTCATATTATAGATaGACCTCTGCTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRHSYYR*TSALHP
Trigger: TGGATGCAGAGCAGAGGTCCATCTATAATATGAGTG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCATCGTCGTCATGTCTaGTTCTTTGCAAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRHRRHV*FFANGD
Trigger: ATCACCATTTGCAAAGAACCAGACATGACGACGATG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGAGGCCCACAAAGACTaGAGAATTGTCATTTATGTC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIREAHKD*RIVIYV
Trigger: GACATAAATGACAATTCTCCAGTCTTTGTGGGCCTC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTCCACTGTCATGAACTaGGGAGCATTGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDISTVMN*GALSFS
Trigger: TGAAAATGACAATGCTCCCCAGTTCATGACAGTGGA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACCCTTTGTTATTTTCTaGCCGTTCCCCATTAACTGT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLPFVIF*PFPINC
Trigger: ACAGTTAATGGGGAACGGCCAGAAAATAACAAAGGG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGCTGCTACTTTAAAGTaGAAAGCTGGGCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPAATLK*KAGLVS
Trigger: TGAAACCAGCCCAGCTTTCCACTTTAAAGTAGCAGC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAACCTGATCACACACTaGGCTATTGTCATTCACATC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRNLITH*AIVIHI
Trigger: GATGTGAATGACAATAGCCCAGTGTGTGATCAGGTT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCACAGTACATACTAATTaGTCCAAACACGCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALITVHTN*SKHAPN
Trigger: ATTTGGAGCGTGTTTGGACCAATTAGTATGTACTGT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAATAGATCTATTAAGGTaGTGCCCATTCTACTCTGGC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPIDLLR*CPFYSG
Trigger: GCCAGAGTAGAATGGGCATCACCTTAATAGATCTAT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAACGAGAAAGGAACATaGGTGACTACATGGATTGTT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLNEKGT*VTTWIV
Trigger: AACAATCCATGTAGTCACTCATGTTCCTTTCTCGTT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAATGCTGAACATTTTTaGGGAGATCCCTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRNAEHF*GDPLSF
Trigger: AAAAGACAAGGGATCTCCTCAAAAATGTTCAGCATT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTTCAGTACCAATGCCTaGACTTTCAAGAATGTTAAC +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRFSTNA*TFKNVN
Trigger: GTTAACATTCTTGAAAGTTCAGGCATTGGTACTGAA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATGTATCTGTCAAGACTaGGTAAGTCACTTCACCATT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGCICQD*VSHFTI
Trigger: AATGGTGAAGTGACTTACTCAGTCTTGACAGATACA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAATAAACGATTCCAGTTaGGCTATTGATGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGINDSS*AIDGKL
Trigger: CAGTTTGCCATCAATAGCTCAACTGGAATCGTTTAT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCATAAACGATTCCAGTTaGGCTATTGATGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIINDSS*AIDGKL
Trigger: CAGTTTGCCATCAATAGCTCAACTGGAATCGTTTAT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATCGATCCAATTTCCTTaGAGTTGTTGTAATCAGACC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSIQFP*SCCNQT
Trigger: GGTCTGATTACAACAACTTCAAGGAAATTGGATCGA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTCGATCCAATTTCCTTaGAGTTGTTGTAATCAGACC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDISIQFP*SCCNQT
Trigger: GGTCTGATTACAACAACTTCAAGGAAATTGGATCGA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATTTTCATCTAGAACCTaGACCACCACCCAAATGGTT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPFSSRT*TTTQMV
Trigger: AACCATTTGGGTGGTGGTTCAGGTTCTAGATGAAAA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCACTATCTATTGATCTaGCTTTCAAAGTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRHYLLI*LSKCSV
Trigger: AACACTGCACTTTGAAAGTCAGATCAATAGATAGTG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAATACTGAGACTGGGTaGATGATGGCAAGAACGTTT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPNTETG*MMARTF
Trigger: AAACGTTCTTGCCATCATTCACCCAGTCTCAGTATT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCAGAAAGCCGATATTTaGTGTAACTGTTTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRQKADI*CNCFQQ
Trigger: TTGCTGGAAACAGTTACATCAAATATCGGCTTTCTG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACAGAAAGCCGATATTTaGTGTAACTGTTTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLQKADI*CNCFQQ
Trigger: TTGCTGGAAACAGTTACATCAAATATCGGCTTTCTG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCAGAAAGCCGATATTTaGTGTAACTGTTTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIQKADI*CNCFQQ
Trigger: TTGCTGGAAACAGTTACATCAAATATCGGCTTTCTG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACTTGTTGGGACAGTATaGCTTGTGAAGAAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLLVGTV*LVKKFL
Trigger: TAGAAACTTCTTCACAAGTCATACTGTCCCAACAAG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGAATGTGCATGTATATaGAGAAATGGCATACCTCAT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQECACI*RNGIPH
Trigger: ATGAGGTATGCCATTTCTTCATATACATGCACATTC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGAATGTGCATGTATATaGAGAAATGGCATACCTCAT +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRECACI*RNGIPH
Trigger: ATGAGGTATGCCATTTCTTCATATACATGCACATTC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAAAAGAACACAAGACTaGATACTGCCACCAGCAATA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRKRTQD*ILPPAI
Trigger: TATTGCTGGTGGCAGTATTCAGTCTTGTGTTCTTTT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAAAAGAACACAAGACTaGATACTGCCACCAGCAATA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGKRTQD*ILPPAI
Trigger: TATTGCTGGTGGCAGTATTCAGTCTTGTGTTCTTTT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAATGATGACTTCCTCTaGTTTGAAAAAGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLNDDFL*FEKAFL
Trigger: GAGGAAGGCTTTTTCAAAGCAGAGGAAGTCATCATT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGTGAACATAAAGCTTTaGAGTACTGCTCACTCCATT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGVNIKL*STAHSI
Trigger: AATGGAGTGAGCAGTACTGCAAAGCTTTATGTTCAC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCATCAACTGTCACCACTaGATATGTTGGCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIINCHH*ICWLFF
Trigger: GAAAAAGAGCCAACATATGCAGTGGTGACAGTTGAT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCATTCTCTCCATCAGTTaGTGTAATTCTGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIILSIS*CNSEGK
Trigger: TTTGCCCTCAGAATTACAGCAACTGATGGAGAGAAT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACTATTGATGGCAAACTaGTGTGTATCTGTCAAGACT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLLLMAN*CVSVKT
Trigger: AGTCTTGACAGATACACAGCAGTTTGCCATCAATAG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGAAAATGTTCTGCCTaGTGTTCTCGATCCAATTTC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRKCSA*CSRSNF
Trigger: GAAATTGGATCGAGAACAGCAGGCAGAACATTTTCT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCTCATCTCTATCAAATaGAAAAGCCCTGTAAATCGG +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRLISIK*KSPVNR
Trigger: CCGATTTACAGGGCTTTTGCATTTGATAGAGATGAG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATTCCTGGGTTTAAGATaGTGTATTTTAAGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQFLGLR*CILRAH
Trigger: ATGAGCCCTTAAAATACAGCATCTTAAACCCAGGAA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAAAATCAGAGCTGTCTaGATCAGAGGCTTGTACACA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPKIRAV*IRGLYT
Trigger: TGTGTACAAGCCTCTGATGCAGACAGCTCTGATTTT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGCTGTCAATATTGAATaGTTCCATTACCTTTTCGGG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGAVNIE*FHYLFG
Trigger: CCCGAAAAGGTAATGGAAGCATTCAATATTGACAGC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTGCCTCTTTGATTGTTaGCAGTTTTTAATACTGCAA +
Preference number: 4 (lower is better)
Translates to: HSPSKRCCVSSRDSSALICLFDC*QFLILQ
Trigger: TTGCAGTATTAAAAACTGGCAACAATCAAAGAGGCA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAGCAGCCTTACTGAGTaGAAGCACATATTTGTACAT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSSLTE*KHIFVH
Trigger: ATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAGCAGCCTTACTGAGTaGAAGCACATATTTGTACAT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSSLTE*KHIFVH
Trigger: ATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCATCTTGGCCTGACTaGAAAGCATTTCATAATCTA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLASWPD*KAFHNL
Trigger: TAGATTATGAAATGCTTTGCAGTCAGGCCAAGATGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATTACTCCCAAGTTCTTaGTTACTATATGACGAGCAC +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLLLPSS*LLYDEH
Trigger: GTGCTCGTCATATAGTAAGCAAGAACTTGGGAGTAA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAATCTCTCTGATACAGTaGTTAAAAAGAACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQISLIQ*LKRTAS
Trigger: GGAAGCAGTTCTTTTTAAGCACTGTATCAGAGAGAT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCATAAGCATCATACAGTaGTTGCTGAAATTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIISIIQ*LLKFWG
Trigger: ACCCCAGAATTTCAGCAACCACTGTATGATGCTTAT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGAATCTGTAAATTTCTaGGGAGGATTCAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQESVNF*GGFKIQ
Trigger: CTGGATTTTGAATCCTCCCCAGAAATTTACAGATTC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTATGAAATAACTCCCTaGCAAGCCACTTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRYEITP*QATFSK
Trigger: CTTTGAAAAAGTGGCTTGCCAGGGAGTTATTTCATA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAAGAATAATTGGCTTTaGATTCCCGGTCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPKNNWL*IPGPTG
Trigger: ACCAGTTGGACCGGGAATCCAAAGCCAATTATTCTT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATCTCTGCCTTGTCCCTaGCTTCTATTTTCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSLPCP*LLFSKN
Trigger: ATTCTTTGAAAATAGAAGCCAGGGACAAGGCAGAGA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAGACGCTTCATACAGTaGGTTGGTAAAATAAGGACT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLRRFIQ*VGKIRT
Trigger: AGTCCTTATTTTACCAACCCACTGTATGAAGCGTCT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGACGCTTCATACAGTaGGTTGGTAAAATAAGGACT +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRRFIQ*VGKIRT
Trigger: AGTCCTTATTTTACCAACCCACTGTATGAAGCGTCT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAATCAAGCTTGCTTGTTaGGACAGTATGACTTGTGAA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGIKLAC*DSMTCE
Trigger: TTCACAAGTCATACTGTCCCAACAAGCAAGCTTGAT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTCATTTTCACCCAACTaGAATCAAGCTTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDISFSPN*NQACLL
Trigger: CAACAAGCAAGCTTGATTCCAGTTGGGTGAAAATGA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCAAAGCCATACAAGACTaGCTGTATAACTTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIKAIQD*LYNLVG
Trigger: ACCCACTAAGTTATACAGCCAGTCTTGTATGGCTTT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CAA 72 bp TGTGTGTGTGTGTGTGTGTGTAGTTACCTCAAAAGTTaGCAGACCAACAGCGTGGATGACTTACAATTATAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCSYLKS*QTNSVDDLQLY
Trigger: ATATAATTGTAAGTCATCCACGCTGTTGGTCTGCAAACTTTTGAGGTAACTACACACACACACACACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAATGCTGAACATTTTTaGGGAGATCCCTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRNAEHF*GDPLSF
Trigger: AAAAGACAAGGGATCTCCTCAAAAATGTTCAGCATT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACACTATCTATTGATCTaGCTTTCAAAGTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLHYLLI*LSKCSV
Trigger: AACACTGCACTTTGAAAGTCAGATCAATAGATAGTG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR TCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTGTAGAGAAGCTATATaGACAAAGCCAACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRCREAI*TKPTSV
Trigger: TACAGAAGTTGGCTTTGTTCATATAGCTTCTCTACA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR TCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGAATGTGCATGTATATaGAGAAATGGCATACCTCAT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIECACI*RNGIPH
Trigger: ATGAGGTATGCCATTTCTTCATATACATGCACATTC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGGAAAATTCACTTATaGTCACATCGTACACTTCTT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRGKIHL*SHRTLL
Trigger: AAGAAGTGTACGATGTGAGCATAAGTGAATTTTCCC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGCGGATGGCACCACTTaGTTTATCTATTTCAAATCT +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPADGTT*FIYFKS
Trigger: AGATTTGAAATAGATAAAGCAAGTGGTGCCATCCGC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAAAAATGATCCAAACTaGCTTCCATTAGGCTGTATG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGKNDPN*LPLGCM
Trigger: CATACAGCCTAATGGAAGGCAGTTTGGATCATTTTT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCATTCCCAGATAAAATaGTATATTCCAACCGGTCAA +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIHSQIK*YIPTGQ
Trigger: TTGACCGGTTGGAATATAGCATTTTATCTGGGAATG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACCAGGTAAAACCTTTTaGATAATTCATAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLPGKTF*IIHSPG
Trigger: TCCTGGACTATGAATTATGCAAAAGGTTTTACCTGG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGAACTTCAGAGTTGCTaGCTTTATTACTACCTGCAA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPELQSC*LYYYLQ
Trigger: TTGCAGGTAGTAATAAAGGCAGCAACTCTGAAGTTC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAACTGAACTTCAGAGTTaGTGCCTTTATTACTACCTG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPTELQS*CLYYYL
Trigger: CAGGTAGTAATAAAGGCAGCAACTCTGAAGTTCAGT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAATTACATGCAACAATaGCTCTTTGATTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGNYMQQ*LFDCCQ
Trigger: CTGGCAACAATCAAAGAGGCATTGTTGCATGTAATT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCAATTACATGCAACAATaGCTCTTTGATTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDINYMQQ*LFDCCQ
Trigger: CTGGCAACAATCAAAGAGGCATTGTTGCATGTAATT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACAATTTACACACCAATaGCATATGTCATCAGAAACT +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQQFTHQ*HMSSET
Trigger: AGTTTCTGATGACATATGGCATTGGTGTGTAAATTG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTGGTATATATTTAGCTaGAGAGCTATTCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRWYIFS*RAILQK
Trigger: TTTCTGCAGAATAGCTCTGCAGCTAAATATATACCA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATGGTATATATTTAGCTaGAGAGCTATTCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQWYIFS*RAILQK
Trigger: TTTCTGCAGAATAGCTCTGCAGCTAAATATATACCA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGCAATACTAGTAAAGTaGCTACAACAGATTATGGGA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGAILVK*LQQIMG
Trigger: TCCCATAATCTGTTGTAGGCACTTTACTAGTATTGC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCAATACTAGTAAAGTaGCTACAACAGATTATGGGA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLAILVK*LQQIMG
Trigger: TCCCATAATCTGTTGTAGGCACTTTACTAGTATTGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGATCTCTCTGATACAGTaGTTAAAAAGAACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRISLIQ*LKRTAS
Trigger: GGAAGCAGTTCTTTTTAAGCACTGTATCAGAGAGAT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACGGCTGAGAGAATTCTaGGCCATTATCATTATTATC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPRLREF*AIIIII
Trigger: GATAATAATGATAATGGCCCAGAATTCTCTCAGCCG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGATGACTCCAGAATATaGATTTATGGTAAAGATCCC +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGDDSRI*IYGKDP
Trigger: GGGATCTTTACCATAAATCCATATTCTGGAGTCATC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATTCAGTTTTGAGGACTaGATTGTTATATTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LFARRVLQYILIGPNTLQFSFED*IVIFPV
Trigger: CACTGGAAATATAACAATCCAGTCCTCAAAACTGAA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATGTCATCAGAAACTGTaGACACAGATTTGCTCATTA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGCHQKL*TQICSL
Trigger: TAATGAGCAAATCTGTGTCCACAGTTTCTGATGACA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAACAGTACATACTAATTaGTCCAAACACGCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLTVHTN*SKHAPN
Trigger: ATTTGGAGCGTGTTTGGACCAATTAGTATGTACTGT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCAAAATGCAGTAGTGTaGGCTCATAAGATTGTTAAA +
Preference number: 4 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRQNAVV*AHKIVK
Trigger: TTTAACAATCTTATGAGCCCACACTACTGCATTTTG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTGCAGACCAACAGCGTaGATGACTTACAATTATATT +
Preference number: 4 (lower is better)
Translates to: PGIYLAAELFCRKSGDDICRPTA*MTYNYI
Trigger: AATATAATTGTAAGTCATCCACGCTGTTGGTCTGCA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CAA 72 bp CCCTCAACCTGTCAACTTTCAGTTTTGAGGACTGGATaGTTATATTTCCAGTGGAATGATTCTCCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: PSTCQLSVLRTG*LYFQWNDSPVN
Trigger: ATTAACAGGAGAATCATTCCACTGGAAATATAACAATCCAGTCCTCAAAACTGAAAGTTGACAGGTTGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAAAAATGATCCAAACTaGCTTCCATTAGGCTGTATG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPKNDPN*LPLGCM
Trigger: CATACAGCCTAATGGAAGGCAGTTTGGATCATTTTT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR GCA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTGGCTCAAAATTACATaGAACAATGCCTCTTTGATT +
Preference number: 4 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRWLKIT*NNASLI
Trigger: AATCAAAGAGGCATTGTTGCATGTAATTTTGAGCCA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATCTACGATTCTCAAGTaGATTCTAAACACTAGAAGA +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSTILK*ILNTRR
Trigger: TCTTCTAGTGTTTAGAATGCACTTGAGAATCGTAGA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGTGCTTAAAAAGAACTaGTTCCATTTCCAAACACAT +
Preference number: 4 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLVLKKN*FHFQTH
Trigger: ATGTGTTTGGAAATGGAAGCAGTTCTTTTTAAGCAC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR GCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAATCTCTCTGATACAGTaGTTAAAAAGAACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPISLIQ*LKRTAS
Trigger: GGAAGCAGTTCTTTTTAAGCACTGTATCAGAGAGAT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATTTTCAAAGAATAATTaGCTTTGGATTCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPFSKNN*LWIPGP
Trigger: TGGACCGGGAATCCAAAGCCAATTATTCTTTGAAAA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACATTTATTCCCTAATTaGATGAACCTCAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPHLFPN*MNLKAW
Trigger: CCATGCTTTGAGGTTCATCCAATTAGGGAATAAATG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACAAAATGCAGTAGTGTaGGCTCATAAGATTGTTAAA +
Preference number: 4 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGQNAVV*AHKIVK
Trigger: TTTAACAATCTTATGAGCCCACACTACTGCATTTTG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CAA 72 bp CCAAATGGAACCCAAAAAGCCTCATGTTGCTCTTCATaGATACCTTTCTTGAAGATCATAAAACCCAACTAT +
Preference number: 4 (lower is better)
Translates to: PNGTQKASCCSS*IPFLKIIKPNY
Trigger: ATAGTTGGGTTTTATGATCTTCAAGAAAGGTATCAATGAAGAGCAACATGAGGCTTTTTGGGTTCCATTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CCA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACAAAATGCAGTAGTGTaGGCTCATAAGATTGTTAAA +
Preference number: 4 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPQNAVV*AHKIVK
Trigger: TTTAACAATCTTATGAGCCCACACTACTGCATTTTG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CAA 72 bp CAATGCCATATGTCATCAGAAACTGTGGACACAGATTaGCTCATTAAGCAGATAGTGCAAATATGCATATAT +
Preference number: 4 (lower is better)
Translates to: QCHMSSETVDTD*LIKQIVQICIY
Trigger: ATATATGCATATTTGCACTATCTGCTTAATGAGCAAATCTGTGTCCACAGTTTCTGATGACATATGGCATTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
3UTR CAA 72 bp AAAGACATTGTGGATTTTCATCAGAATAATGTGCAGTaGAACACTGTGGGACACAAACCAGCAAAAACATAT +
Preference number: 4 (lower is better)
Translates to: KDIVDFHQNNVQ*NTVGHKPAKTY
Trigger: ATATGTTTTTGCTGGTTTGTGTCCCACAGTGTTCAACTGCACATTATTCTGATGAAAATCCACAATGTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp ACCCGGTGCTCGGCGCTCTTGCTCCGGGCGAGCCGGTCCCCCGGCTaGTGCCGCCGCAGCGCCCACCGCGCGCTAGCCGGGACTGAGGCC +
Preference number: 5 (lower is better)
Translates to: TRCSALLLRASRSPG*CRRSAHRALAGTEA
Trigger: GGCCTCAGTCCCGGCTAGCGCGCGGTGGGCGCTGCGGCGGCAGCAGCCGGGGGACCGGCTCGCCCGGAGCAAGAGCGCCGAGCACCGGGT
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS GCA 90 bp TCCACGGCTCTACGAGGCGCCTCCCCCGTGGTCTTCTTCACCCGGTaGTCGGCGCTCTTGCTCCGGGCGAGCCGGTCCCCCGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: STALRGASPVVFFTR*SALLLRASRSPGCC
Trigger: GCAGCAGCCGGGGGACCGGCTCGCCCGGAGCAAGAGCGCCGAGCACCGGGTGAAGAAGACCACGGGGGAGGCGCCTCGTAGAGCCGTGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS GCA 90 bp GGGAGGCGCGAGATCCCAATCCGCAGGCCAGTTCACAGCGCAGCCTaGGGGGAGGAGCGCCGGCTCTCCTGTCTGCTCCGAGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: GRREIPIRRPVHSAA*GEERRLSCLLRAAA
Trigger: GGCTGCAGCTCGGAGCAGACAGGAGAGCCGGCGCTCCTCCCCGCAGGCTGCGCTGTGAACTGGCCTGCGGATTGGGATCTCGCGCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS CCA 90 bp CTTGCCTCCGCTGGCGATCCACGGCTCTACGAGGCGCCTCCCCCGTaGTCTTCTTCACCCGGTGCTCGGCGCTCTTGCTCCGGGCGAGCC +
Preference number: 5 (lower is better)
Translates to: LASAGDPRLYEAPPP*SSSPGARRSCSGRA
Trigger: GGCTCGCCCGGAGCAAGAGCGCCGAGCACCGGGTGAAGAAGACCACGGGGGAGGCGCCTCGTAGAGCCGTGGATCGCCAGCGGAGGCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS TCA 90 bp ACGACCACGCCCCGCCGGGCTGTCAGGATGCGGGGCGACTCAGGGTaGAACGTGGTCATTTCCTGGTGCTCGCCTCCCAGCCCGTCCACG +
Preference number: 5 (lower is better)
Translates to: TTTPRRAVRMRGDSG*NVVISWCSPPSPST
Trigger: CGTGGACGGGCTGGGAGGCGAGCACCAGGAAATGACCACGTTTCACCCTGAGTCGCCCCGCATCCTGACAGCCCGGCGGGGCGTGGTCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp CCACCACGGGGCGCAGCCCGCAGTACTGGCCCACGTAGCCCGGCGTaGAGTTGCAGAGGAAGGAGCCGAACACGTTCACGCAGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: PPRGAARSTGPRSPA*SCRGRSRTRSRRSL
Trigger: GAGGCTCCTGCGTGAACGTGTTCGGCTCCTTCCTCTGCAACTGCACGCCGGGCTACGTGGGCCAGTACTGCGGGCTGCGCCCCGTGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp CGGGGCGCAGCCCGCAGTACTGGCCCACGTAGCCCGGCGTGCAGTTaGAGAGGAAGGAGCCGAACACGTTCACGCAGGAGCCTCCGTTCT +
Preference number: 5 (lower is better)
Translates to: RGAARSTGPRSPACS*RGRSRTRSRRSLRS
Trigger: AGAACGGAGGCTCCTGCGTGAACGTGTTCGGCTCCTTCCTCTGCAACTGCACGCCGGGCTACGTGGGCCAGTACTGCGGGCTGCGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 90 bp CGCCCCGCCGGGCTGTCAGGATGCGGGGCGACTCAGGGTGAAACGTaGTCATTTCCTGGTGCTCGCCTCCCAGCCCGTCCACGATCTTAT +
Preference number: 5 (lower is better)
Translates to: RPAGLSGCGATQGET*SFPGARLPARPRSY
Trigger: ATAAGATCGTGGACGGGCTGGGAGGCGAGCACCAGGAAATGACCACGTTTCACCCTGAGTCGCCCCGCATCCTGACAGCCCGGCGGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp TTGGTGCCTGCCACGGGCTGGATGCTGATGATGCGCAGGCTGTCCTaGTTCTGGGTGAGGACTGCATTCCGCAGGGTGCGCCGGAACCCA +
Preference number: 5 (lower is better)
Translates to: LVPATGWMLMMRRLS*FWVRTAFRRVRRNP
Trigger: TGGGTTCCGGCGCACCCTGCGGAATGCAGTCCTCACCCAGAAGCAGGACAGCCTGCGCATCATCAGCATCCAGCCCGTGGCAGGCACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 90 bp CCTGCCACGGGCTGGATGCTGATGATGCGCAGGCTGTCCTGCTTCTaGGTGAGGACTGCATTCCGCAGGGTGCGCCGGAACCCATGCATG +
Preference number: 5 (lower is better)
Translates to: PATGWMLMMRRLSCF*VRTAFRRVRRNPCM
Trigger: CATGCATGGGTTCCGGCGCACCCTGCGGAATGCAGTCCTCACCCAGAAGCAGGACAGCCTGCGCATCATCAGCATCCAGCCCGTGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 90 bp CAACCCCTTTGTTCTCAGTTCCCGCGTCCCAGCCATTCTTCCGGATaGAGTCGCAGTCGGAGCGGCAGGGTGACACGGCGGGGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: QPLCSQFPRPSHSSG*SRSRSGRVTRRGGW
Trigger: CCAACCTCCCCGCCGTGTCACCCTGCCGCTCCGACTGCGACTCCATCCGGAAGAATGGCTGGGACGCGGGAACTGAGAACAAAGGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409404.6
ENST00000489716.1
ENST00000525166.6
ENST00000533797.1
CDS CCA 90 bp CTTCTCCTGCAGTCTGGGCTCAGTGTGCTGGCCAGGGAGACAGGCTaGGAGGGTGGCAGGGCCTCATATTGGTCTGGGAAGTCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: LLLQSGLSVLARETG*EGGRASYWSGKSSG
Trigger: CCCGGAGGACTTCCCAGACCAATATGAGGCCCTGCCACCCTCCCAGCCTGTCTCCCTGGCCAGCACACTGAGCCCAGACTGCAGGAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409404.6
ENST00000489716.1
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp CTGGATGCTGATGATGCGCAGGCTGTCCTGCTTCTGGGTGAGGACTaGATTCCGCAGGGTGCGCCGGAACCCATGCATGTGCAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: LDADDAQAVLLLGED*IPQGAPEPMHVQPH
Trigger: GTGGGGCTGCACATGCATGGGTTCCGGCGCACCCTGCGGAATGCAGTCCTCACCCAGAAGCAGGACAGCCTGCGCATCATCAGCATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp TCAGGCTGCGGATGTTATCCGCTTGCACCAGGGCGCCGAAGTAGATaGTACTCTCAGTGCTCAGCGTCTGGAAGTAGAGGGGCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: SGCGCYPLAPGRRSR*YSQCSASGSRGAPG
Trigger: GCCGGGCGCCCCTCTACTTCCAGACGCTGAGCACTGAGAGTAGCATCTACTTCGGCGCCCTGGTGCAAGCGGATAACATCCGCAGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp TTCAGTATCACCGAGTCCAGGCAGCCCTGGAAGCCGCTGAGCACCTaGGTGACCCGCGTGTCAGTCAGGCTGCGGATGTTATCCGCTTGC +
Preference number: 5 (lower is better)
Translates to: FSITESRQPWKPLST*VTRVSVRLRMLSAC
Trigger: GCAAGCGGATAACATCCGCAGCCTGACTGACACGCGGGTCACGCAGGTGCTCAGCGGCTTCCAGGGCTGCCTGGACTCGGTGATACTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 90 bp TGTGTCTCTGTCCCAGGTGCTGAGGACGGCTACCACCTCGCCCGGTaGGTCGCTCTCCTTCACATTCCCTCGGTACACTTCCTGCGCGAA +
Preference number: 5 (lower is better)
Translates to: CVSVPGAEDGYHLAR*VALLHIPSVHFLRE
Trigger: TTCGCGCAGGAAGTGTACCGAGGGAATGTGAAGGAGAGCGACCCACCGGGCGAGGTGGTAGCCGTCCTCAGCACCTGGGACAGAGACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp GGATTAGGTGGATGTTGGACTGGCAGAACCTGCCACCCCCGTCAGTaGCCTTGGCCATCAGGCTGTACACGGGGATCCTCTCCCGGTCCA +
Preference number: 5 (lower is better)
Translates to: GLGGCWTGRTCHPRQ*PWPSGCTRGSSPGP
Trigger: TGGACCGGGAGAGGATCCCCGTGTACAGCCTGATGGCCAAGGCCACTGACGGGGGTGGCAGGTTCTGCCAGTCCAACATCCACCTAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp TTTCCTGGTGCTCGCCTCCCAGCCCGTCCACGATCTTATCCAGGTTaGTCCTGGAGTCACTCTGGAAGCAGGGTGTGTAGGCCATGGGGC +
Preference number: 5 (lower is better)
Translates to: FPGARLPARPRSYPG*SWSHSGSRVCRPWG
Trigger: GCCCCATGGCCTACACACCCTGCTTCCAGAGTGACTCCAGGAGCAACCTGGATAAGATCGTGGACGGGCTGGGAGGCGAGCACCAGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp GCTGTGCATCTCCACCGCAAACAGCATGTCCAGTTGGTTGGTGCCTaGCACGGGCTGGATGCTGATGATGCGCAGGCTGTCCTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: AVHLHRKQHVQLVGA*HGLDADDAQAVLLL
Trigger: CAGAAGCAGGACAGCCTGCGCATCATCAGCATCCAGCCCGTGGCAGGCACCAACCAACTGGACATGCTGTTTGCGGTGGAGATGCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp AGCCCAGCTTCAGCTCCGTCAGGCCCACCACCTCCGCGAAGCTGCTaGGCTTGTTCTGCAGCGGCAGCTCATTGTTATTCAGTATCACCG +
Preference number: 5 (lower is better)
Translates to: SPASAPSGPPPPRSC*ACSAAAAHCYSVSP
Trigger: CGGTGATACTGAATAACAATGAGCTGCCGCTGCAGAACAAGCGCAGCAGCTTCGCGGAGGTGGTGGGCCTGACGGAGCTGAAGCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp CGCAGCCCAGCTTCAGCTCCGTCAGGCCCACCACCTCCGCGAAGCTaGTGCGCTTGTTCTGCAGCGGCAGCTCATTGTTATTCAGTATCA +
Preference number: 5 (lower is better)
Translates to: RSPASAPSGPPPPRS*CACSAAAAHCYSVS
Trigger: TGATACTGAATAACAATGAGCTGCCGCTGCAGAACAAGCGCAGCAGCTTCGCGGAGGTGGTGGGCCTGACGGAGCTGAAGCTGGGCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp CCGCAGTTGGCAGACACATCCGAGGATGAGGTGCCTCTGGAATTGTaGAAGGACAGAGACACGCTGTCTGCTGGGCCTGTGGGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: PQLADTSEDEVPLEL*KDRDTLSAGPVGSV
Trigger: CACAGAGCCCACAGGCCCAGCAGACAGCGTGTCTCTGTCCTTGCACAATTCCAGAGGCACCTCATCCTCGGATGTGTCTGCCAACTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 90 bp TCCACCGCAAACAGCATGTCCAGTTGGTTGGTGCCTGCCACGGGCTaGATGCTGATGATGCGCAGGCTGTCCTGCTTCTGGGTGAGGACT +
Preference number: 5 (lower is better)
Translates to: STANSMSSWLVPATG*MLMMRRLSCFWVRT
Trigger: AGTCCTCACCCAGAAGCAGGACAGCCTGCGCATCATCAGCATCCAGCCCGTGGCAGGCACCAACCAACTGGACATGCTGTTTGCGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 90 bp GTGTGCTCCCCTGGTGTGCAGACCCTCCATCCTGGTTCTCATAGTTaGGCACTTCCTCTATGTCCGACAGGCGGGCCCCTGGCATCCAAT +
Preference number: 5 (lower is better)
Translates to: VCSPGVQTLHPGSHS*ALPLCPTGGPLASN
Trigger: ATTGGATGCCAGGGGCCCGCCTGTCGGACATAGAGGAAGTGCCCAACTATGAGAACCAGGATGGAGGGTCTGCACACCAGGGGAGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409404.6
ENST00000469900.1
ENST00000489716.1
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp CCAGGACTCTGGTCAGTGGCCCGCACGCTGATGTTGTACGAAGACTaGTGCTCACGGTCCAGTGGCTGCTCCAGGATGATGATGCCAGAT +
Preference number: 5 (lower is better)
Translates to: PGLWSVARTLMLYED*CSRSSGCSRMMMPD
Trigger: ATCTGGCATCATCATCCTGGAGCAGCCACTGGACCGTGAGCAGCAGTCTTCGTACAACATCAGCGTGCGGGCCACTGACCAGAGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp CGGCCCGAGATGCCCAAGATTCCAGGGCCGCTGCCGCAGTCCAGCTaGAACCACAGCTTGCCATCCACAATCTTCAGAATTATGCAGGGA +
Preference number: 5 (lower is better)
Translates to: RPEMPKIPGPLPQSS*NHSLPSTIFRIMQG
Trigger: TCCCTGCATAATTCTGAAGATTGTGGATGGCAAGCTGTGGTTCCAGCTGGACTGCGGCAGCGGCCCTGGAATCTTGGGCATCTCGGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 90 bp CGTCAAAGCCGCAGTTGGCAGACACATCCGAGGATGAGGTGCCTCTaGAATTGTGCAAGGACAGAGACACGCTGTCTGCTGGGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: RQSRSWQTHPRMRCL*NCARTETRCLLGLW
Trigger: CCACAGGCCCAGCAGACAGCGTGTCTCTGTCCTTGCACAATTCCAGAGGCACCTCATCCTCGGATGTGTCTGCCAACTGCGGCTTTGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACGGTGCTCGGCGCTCTaGCTCCGGGCGAGCCGGTCC +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRRCSAL*LRASRS
Trigger: GGACCGGCTCGCCCGGAGCAAGAGCGCCGAGCACCG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS CCA 90 bp GAACGGTCTCCTGCTGGCTTCATAACTGACACACTGCATGTCCCCTaGACACGGCTTCTCCACACAAGGATCGTTGGACCCCGGACACAG +
Preference number: 5 (lower is better)
Translates to: ERSPAGFITDTLHVP*TRLLHTRIVGPRTQ
Trigger: CTGTGTCCGGGGTCCAACGATCCTTGTGTGGAGAAGCCGTGTCCAGGGGACATGCAGTGTGTCAGTTATGAAGCCAGCAGGAGACCGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTGCCAGCTCCCGTCGTaGACAGCACGGCCCGAGATG +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLCQLPS*TARPEM
Trigger: CATCTCGGGCCGTGCTGTCAACGACGGGAGCTGGCA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp ACCCAGGTAGTAATCGCTCTCCAGCTCCCGTGTGCTCCCCTGGTGTaGAGACCCTCCATCCTGGTTCTCATAGTTGGGCACTTCCTCTAT +
Preference number: 5 (lower is better)
Translates to: TQVVIALQLPCAPLV*RPSILVLIVGHFLY
Trigger: ATAGAGGAAGTGCCCAACTATGAGAACCAGGATGGAGGGTCTGCACACCAGGGGAGCACACGGGAGCTGGAGAGCGATTACTACCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409404.6
ENST00000489716.1
ENST00000525166.6
ENST00000533797.1
CDS CCA 90 bp GTGATGGTGACAGTAGTGAGAGAGGACAGGGACTGTCCAGGACTCTaGTCAGTGGCCCGCACGCTGATGTTGTACGAAGACTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: VMVTVVREDRDCPGL*SVARTLMLYEDCCS
Trigger: TGAGCAGCAGTCTTCGTACAACATCAGCGTGCGGGCCACTGACCAGAGTCCTGGACAGTCCCTGTCCTCTCTCACTACTGTCACCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp AAGGACAGAGACACGCTGTCTGCTGGGCCTGTGGGCTCTGTGCCCTaGTTCATGCTCACAGCAAAAGTACTAAATTCACAGCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: KDRDTLSAGPVGSVP*FMLTAKVLNSQLAG
Trigger: GCCTGCCAGCTGTGAATTTAGTACTTTTGCTGTGAGCATGAACCAGGGCACAGAGCCCACAGGCCCAGCAGACAGCGTGTCTCTGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGAGACAGGCCGCCCTTaGTCTTTGGCCCGCACAGTA +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLETGRP*SLARTV
Trigger: TACTGTGCGGGCCAAAGACAAAGGGCGGCCTGTCTC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGGGATGCCATTGCTCTaGTTAAGCAGGGCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLGMPLL*LSRAAV
Trigger: CACCGCCGCCCTGCTTAACAAGAGCAATGGCATCCC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 90 bp AGGTCAGAGGCCACCACAGAGAAGGTGAATGTGGGGTCTGTCTCGTaGTCTAGGTCCTTCAAGGTACTGATCCAGCCCGTGTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: RSEATTEKVNVGSVS*SRSFKVLIQPVLLS
Trigger: TGACAGCAACACGGGCTGGATCAGTACCTTGAAGGACCTAGATCACGAGACAGACCCCACATTCACCTTCTCTGTGGTGGCCTCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 90 bp AGCGCGTGGGAATCGAGTGACAAGCCTTGCTCACAATGCTGTTCCTaGCAGTCCAGCCCTGAGCAGTTCTTCTCCAAGATGGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: SAWESSDKPCSQCCS*QSSPEQFFSKMAEM
Trigger: CATCTCAGCCATCTTGGAGAAGAACTGCTCAGGGCTGGACTGTCAGGAACAGCATTGTGAGCAAGGCTTGTCACTCGATTCCCACGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 90 bp TACTTCGGAATCGTCAAAGCCGCAGTTGGCAGACACATCCGAGGATaGGGTGCCTCTGGAATTGTGCAAGGACAGAGACACGCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: YFGIVKAAVGRHIRG*GASGIVQGQRHAVC
Trigger: GCAGACAGCGTGTCTCTGTCCTTGCACAATTCCAGAGGCACCTCATCCTCGGATGTGTCTGCCAACTGCGGCTTTGACGATTCCGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 90 bp TCTGATGCTGAGTCTCCACAAAGGGAATGTGAAGGCTGGCGAGGCTaGGCTCTCCCACGCTCTCGTAGTCACTCATGGCTACTTCGGAAT +
Preference number: 5 (lower is better)
Translates to: SDAESPQRECEGWRG*ALPRSRSHSWLLRN
Trigger: ATTCCGAAGTAGCCATGAGTGACTACGAGAGCGTGGGAGAGCTCAGCCTCGCCAGCCTTCACATTCCCTTTGTGGAGACTCAGCATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp ATCTGTCACTCTGACAGAGACCAAGGCCGTGGAGGAAAGAGAGAATaGCTCTCCAAGGTCAGAGGCCACCACAGAGAAGGTGAATGTGGG +
Preference number: 5 (lower is better)
Translates to: ICHSDRDQGRGGKRE*LSKVRGHHREGECG
Trigger: CCCACATTCACCTTCTCTGTGGTGGCCTCTGACCTTGGAGAGGCATTCTCTCTTTCCTCCACGGCCTTGGTCTCTGTCAGAGTGACAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCCCCCGTCAGTGGCCTaGGCCATCAGGCTGTACACG +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGPPSVA*AIRLYT
Trigger: CGTGTACAGCCTGATGGCCAAGGCCACTGACGGGGG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAAACAGCATGTCCAGTaGGTTGGTGCCTGCCACGGG +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLKQHVQ*VGACHG
Trigger: CCCGTGGCAGGCACCAACCAACTGGACATGCTGTTT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGGGTCATCAACCCCTTaGTTCTCAGTTCCCGCGTCC +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLGSSTP*FSVPAS
Trigger: GGACGCGGGAACTGAGAACAAAGGGGTTGATGACCC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp TCAAAGCGGATGGTGACAGTGTTCTGCAGCATCTCATGCACCAACTaGTCCACATGCACGACCACATCAATGGGTACCTGGAAGCGACCA +
Preference number: 5 (lower is better)
Translates to: SKRMVTVFCSISCTN*STCTTTSMGTWKRP
Trigger: TGGTCGCTTCCAGGTACCCATTGATGTGGTCGTGCATGTGGAGCAGTTGGTGCATGAGATGCTGCAGAACACTGTCACCATCCGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp TGCCAATGTCGGGGTCCACGGCTTGAACTCTGGTCAACAGAGCCTTaGTGGCTGTGTTCTCATAGACACAGGTGTTGTAGTGGTCAGAAG +
Preference number: 5 (lower is better)
Translates to: CQCRGPRLELWSTEP*WLCSHRHRCCSGQK
Trigger: CTTCTGACCACTACAACACCTGTGTCTATGAGAACACAGCCACCAAGGCTCTGTTGACCAGAGTTCAAGCCGTGGACCCCGACATTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp TCTCGTAGTCACTCATGGCTACTTCGGAATCGTCAAAGCCGCAGTTaGCAGACACATCCGAGGATGAGGTGCCTCTGGAATTGTGCAAGG +
Preference number: 5 (lower is better)
Translates to: SRSHSWLLRNRQSRS*QTHPRMRCLWNCAR
Trigger: CCTTGCACAATTCCAGAGGCACCTCATCCTCGGATGTGTCTGCCAACTGCGGCTTTGACGATTCCGAAGTAGCCATGAGTGACTACGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAGCATGTCCAGTTGGTaGGTGCCTGCCACGGGCTGG +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSSMSSW*VPATGW
Trigger: CCAGCCCGTGGCAGGCACCAACCAACTGGACATGCT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGACAGGCTCGTGAAATaGCGGTTGAGCTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLDRLVK*RLSSRK
Trigger: CTTCCTGGAGCTCAACCGCAATTTCACGAGCCTGTC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTCGTCAAAGCCGCAGTaGGCAGACACATCCGAGGAT +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLSSKPQ*ADTSED
Trigger: ATCCTCGGATGTGTCTGCCAACTGCGGCTTTGACGA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 90 bp AAATTTCCAGGGGAATGGCTGTGGGCTTGTGGGTGCTTTCCTCAATaGCTCGCACGCGGATGTAAGTGTGAGAAACTTGCTGGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: KFPGEWLWACGCFPQ*LARGCKCEKLAGVC
Trigger: GCAAACCCCAGCAAGTTTCTCACACTTACATCCGCGTGCGAGTCATTGAGGAAAGCACCCACAAGCCCACAGCCATTCCCCTGGAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp ATGGTGACAGTGTTCTGCAGCATCTCATGCACCAACTGCTCCACATaGACGACCACATCAATGGGTACCTGGAAGCGACCATCACTCACA +
Preference number: 5 (lower is better)
Translates to: MVTVFCSISCTNCST*TTTSMGTWKRPSLT
Trigger: TGTGAGTGATGGTCGCTTCCAGGTACCCATTGATGTGGTCGTGCATGTGGAGCAGTTGGTGCATGAGATGCTGCAGAACACTGTCACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp CAGAGCATTCCGGTTGCTGTCAGCATCTGTGGCTCGAATCACCAGTaGGCTGTTATCCAAGCTCCTGACAATGCTATTAATTGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: QSIPVAVSICGSNHQ*AVIQAPDNAINWGS
Trigger: GCTGCCCCAATTAATAGCATTGTCAGGAGCTTGGATAACAGCCCACTGGTGATTCGAGCCACAGATGCTGACAGCAACCGGAATGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp ATGTCTTCAATGTTAACCCTGACCACCACTCTGGCCACACGCAGATaGTCCAGCTCACGGCTGGCTTCTACCACCAGCTCATATAACTCT +
Preference number: 5 (lower is better)
Translates to: MSSMLTLTTTLATRR*SSSRLASTTSSYNS
Trigger: AGAGTTATATGAGCTGGTGGTAGAAGCCAGCCGTGAGCTGGACCATCTGCGTGTGGCCAGAGTGGTGGTCAGGGTTAACATTGAAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp AACATCTGTGAGGTTGATGTTGACAGTGGCCACAGCGCTGAGAGCTaGGGTGCCCCCATCTTTGGCTTCCACTACCAGGTAAAACCTTTT +
Preference number: 5 (lower is better)
Translates to: NICEVDVDSGHSAES*GAPIFGFHYQVKPF
Trigger: AAAAGGTTTTACCTGGTAGTGGAAGCCAAAGATGGGGGCACCCCAGCTCTCAGCGCTGTGGCCACTGTCAACATCAACCTCACAGATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp ACAGTTGCAGTTGATGACATTGCAGGAATGCCACTGTCTACGGCCTaGACAAGCAGAGAGTATCCAGACACCCGTTCCCGGTCCAATTTC +
Preference number: 5 (lower is better)
Translates to: TVAVDDIAGMPLSTA*TSREYPDTRSRSNF
Trigger: GAAATTGGACCGGGAACGGGTGTCTGGATACTCTCTGCTTGTCCAGGCCGTAGACAGTGGCATTCCTGCAATGTCATCAACTGCAACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp TCATGCACCAACTGCTCCACATGCACGACCACATCAATGGGTACCTaGAAGCGACCATCACTCACAGACACATTCAGGACATACTTGCCG +
Preference number: 5 (lower is better)
Translates to: SCTNCSTCTTTSMGT*KRPSLTDTFRTYLP
Trigger: CGGCAAGTATGTCCTGAATGTGTCTGTGAGTGATGGTCGCTTCCAGGTACCCATTGATGTGGTCGTGCATGTGGAGCAGTTGGTGCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp GCAGCATCTCATGCACCAACTGCTCCACATGCACGACCACATCAATaGGTACCTGGAAGCGACCATCACTCACAGACACATTCAGGACAT +
Preference number: 5 (lower is better)
Translates to: AASHAPTAPHARPHQ*VPGSDHHSQTHSGH
Trigger: ATGTCCTGAATGTGTCTGTGAGTGATGGTCGCTTCCAGGTACCCATTGATGTGGTCGTGCATGTGGAGCAGTTGGTGCATGAGATGCTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGTCGGGGTCCACGGCTaGAACTCTGGTCAACAGAGC +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSVGVHG*NSGQQS
Trigger: GCTCTGTTGACCAGAGTTCAAGCCGTGGACCCCGAC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGCGGATGTTATCCGCTaGCACCAGGGCGCCGAAGTA +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSADVIR*HQGAEV
Trigger: TACTTCGGCGCCCTGGTGCAAGCGGATAACATCCGC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGACGATCTTATCCAGGTaGCTCCTGGAGTCACTCTGG +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLTILSR*LLESLW
Trigger: CCAGAGTGACTCCAGGAGCAACCTGGATAAGATCGT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTGGCAGGGCCTCATATaGGTCTGGGAAGTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSWQGLI*VWEVLR
Trigger: CCGGAGGACTTCCCAGACCAATATGAGGCCCTGCCA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 90 bp AGAGACTCTGTGTGCTGGAAGACCACAGCCGACCGCAAGATCCCATaGGGGTCCAACACAAACTCCTCCTCTTCATTTCCCGACAAAATA +
Preference number: 5 (lower is better)
Translates to: RDSVCWKTTADRKIP*GSNTNSSSSFPDKI
Trigger: TATTTTGTCGGGAAATGAAGAGGAGGAGTTTGTGTTGGACCCTCATGGGATCTTGCGGTCGGCTGTGGTCTTCCAGCACACAGAGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp CCATCAGAGACAGACACATTGAGACTGTACAGAGGCTCCATCCGCTaGTTCCGATGGTTGGACAATGTGATAACTCCACTCTTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: PSETDTLRLYRGSIR*FRWLDNVITPLLLS
Trigger: GGACAGCAAGAGTGGAGTTATCACATTGTCCAACCATCGGAAGCAGCGGATGGAGCCTCTGTACAGTCTCAATGTGTCTGTCTCTGATGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp GGCAGGGCTGTACAAGTTAGCCCCAAGTACCCTAATATGCACCTGTaGAGTGCTGGTGAACAACCCATCAGAGACAGACACATTGAGACT +
Preference number: 5 (lower is better)
Translates to: GRAVQVSPKYPNMHL*SAGEQPIRDRHIET
Trigger: AGTCTCAATGTGTCTGTCTCTGATGGGTTGTTCACCAGCACTGCACAGGTGCATATTAGGGTACTTGGGGCTAACTTGTACAGCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp ATCTATGGCTTGAACTTGAGTGACCAAGTGGCCCCTTCCAACATCTaGCCTGACACTGGCTCTATATTCCACTGTCATGAACTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: IYGLNLSDQVAPSNI*PDTGSIFHCHELGS
Trigger: GCTCCCCAGTTCATGACAGTGGAATATAGAGCCAGTGTCAGGGCAGATGTTGGAAGGGGCCACTTGGTCACTCAAGTTCAAGCCATAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp GACACATTTTCAAAGCGGATGGTGACAGTGTTCTGCAGCATCTCATaGACCAACTGCTCCACATGCACGACCACATCAATGGGTACCTGG +
Preference number: 5 (lower is better)
Translates to: DTFSKRMVTVFCSIS*TNCSTCTTTSMGTW
Trigger: CCAGGTACCCATTGATGTGGTCGTGCATGTGGAGCAGTTGGTGCATGAGATGCTGCAGAACACTGTCACCATCCGCTTTGAAAATGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp AAGTCCTCAGGGGACACATTTTCAAAGCGGATGGTGACAGTGTTCTaGAGCATCTCATGCACCAACTGCTCCACATGCACGACCACATCA +
Preference number: 5 (lower is better)
Translates to: KSSGDTFSKRMVTVF*SISCTNCSTCTTTS
Trigger: TGATGTGGTCGTGCATGTGGAGCAGTTGGTGCATGAGATGCTGCAGAACACTGTCACCATCCGCTTTGAAAATGTGTCCCCTGAGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp TGTAGACCTCAATGGTGGAGTAGAGTGGAACAACGCCCCTGTCTGTaGCATACACTGTTAGCCAGTATGACCCCATTGTCTCCCGATCAA +
Preference number: 5 (lower is better)
Translates to: CRPQWWSRVEQRPCL*HTLLASMTPLSPDQ
Trigger: TTGATCGGGAGACAATGGGGTCATACTGGCTAACAGTGTATGCCACAGACAGGGGCGTTGTTCCACTCTACTCCACCATTGAGGTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000528921.1
CDS CCA 90 bp CAATGTCGGGGTCCACGGCTTGAACTCTGGTCAACAGAGCCTTGGTaGCTGTGTTCTCATAGACACAGGTGTTGTAGTGGTCAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: QCRGPRLELWSTEPW*LCSHRHRCCSGQKK
Trigger: TTTCTTCTGACCACTACAACACCTGTGTCTATGAGAACACAGCCACCAAGGCTCTGTTGACCAGAGTTCAAGCCGTGGACCCCGACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp AGGAGGCAGCTGGTCCTGACTCAAGAACTCCTCTTCATGAGGGGGTaGGTATTCACTGTCAATGTCATAACCACCCAGGTAGTAATCGCT +
Preference number: 5 (lower is better)
Translates to: RRQLVLTQELLFMRG*VFTVNVITTQVVIA
Trigger: AGCGATTACTACCTGGGTGGTTATGACATTGACAGTGAATACCCACCCCCTCATGAAGAGGAGTTCTTGAGTCAGGACCAGCTGCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409404.6
ENST00000489716.1
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGGCCGCCCTTTGTCTTaGGCCCGCACAGTAAGGTTA +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRGRPLS*ARTVRL
Trigger: TAACCTTACTGTGCGGGCCAAAGACAAAGGGCGGCC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTCACCTGCAGCACGCTaGTTCCAATGCGTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLSPAAR*FQCVSF
Trigger: AAAACTCACGCATTGGAACAAGCGTGCTGCAGGTGA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTGCCAGCTCCCGTCGTaGACAGCACGGCCCGAGATG +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRCQLPS*TARPEM
Trigger: CATCTCGGGCCGTGCTGTCAACGACGGGAGCTGGCA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATGGCCAGCCTGGATATaGGGTACCACCACGGGGCGC +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLWPAWI*GTTTGR
Trigger: GCGCCCCGTGGTGGTACCCAATATCCAGGCTGGCCA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTGGCCAGCCTGGATATaGGGTACCACCACGGGGCGC +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIWPAWI*GTTTGR
Trigger: GCGCCCCGTGGTGGTACCCAATATCCAGGCTGGCCA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGGGTCATCAACCCCTTaGTTCTCAGTTCCCGCGTCC +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRGSSTP*FSVPAS
Trigger: GGACGCGGGAACTGAGAACAAAGGGGTTGATGACCC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 90 bp TCCTGCAGCCACGTTCTCTCTCACCTCAGCTACGTATGTGCTTTGTaGAAAGGCAGGGCTGTACAAGTTAGCCCCAAGTACCCTAATATG +
Preference number: 5 (lower is better)
Translates to: SCSHVLSHLSYVCAL*KGRAVQVSPKYPNM
Trigger: CATATTAGGGTACTTGGGGCTAACTTGTACAGCCCTGCCTTTTCACAAAGCACATACGTAGCTGAGGTGAGAGAGAACGTGGCTGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 90 bp TACTTGCCGCTGTCCAGGCCTCCCAGGGCGATGATTTTCCCATCGTaGCTGTTCACTTTAAATAAGCTTTTCTGCTCCGATTTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: YLPLSRPPRAMIFPS*LFTLNKLFCSDFRA
Trigger: TGCCCTGAAATCGGAGCAGAAAAGCTTATTTAAAGTGAACAGTCACGATGGGAAAATCATCGCCCTGGGAGGCCTGGACAGCGGCAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp CGGAGTCTTCATCTCGAGCAGTCACCTGCAGCACGCTTGTTCCAATaGGTGAGTTTTCCTTTACAGATCCAACAACAGCAAAGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: RSLHLEQSPAARLFQ*VSFPLQIQQQQSLG
Trigger: TCCCAGACTTTGCTGTTGTTGGATCTGTAAAGGAAAACTCACGCATTGGAACAAGCGTGCTGCAGGTGACTGCTCGAGATGAAGACTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000528921.1
CDS GCA 90 bp CTTGGGGTGAGAATTGTCAGACATGGTGACGGAAATGCGCACAATTaGAGTAGCAGACATTGGCGGGGATCCCTGATCTGTGACTTTGAT +
Preference number: 5 (lower is better)
Translates to: LGVRIVRHGDGNAHN*SSRHWRGSLICDFD
Trigger: ATCAAAGTCACAGATCAGGGATCCCCGCCAATGTCTGCTACTGCAATTGTGCGCATTTCCGTCACCATGTCTGACAATTCTCACCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp TGTGAAAAGGCAGGGCTGTACAAGTTAGCCCCAAGTACCCTAATATaGACCTGTGCAGTGCTGGTGAACAACCCATCAGAGACAGACACA +
Preference number: 5 (lower is better)
Translates to: CEKAGLYKLAPSTLI*TCAVLVNNPSETDT
Trigger: TGTGTCTGTCTCTGATGGGTTGTTCACCAGCACTGCACAGGTGCATATTAGGGTACTTGGGGCTAACTTGTACAGCCCTGCCTTTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp CCTTCTAGAGGGTTTTCCCGGTCTAGCCTTTCTGTGGTGATGACCTaGCCATTGCTGTCTATGAGGAATCGATCCTTGGCAAAGTCATTG +
Preference number: 5 (lower is better)
Translates to: PSRGFSRSSLSVVMT*PLLSMRNRSLAKSL
Trigger: CAATGACTTTGCCAAGGATCGATTCCTCATAGACAGCAATGGGCAGGTCATCACCACAGAAAGGCTAGACCGGGAAAACCCTCTAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp GTCCTTCAAGGTACTGATCCAGCCCGTGTTGCTGTCAATATTGAATaGTTCCATTACCTTTTCGGGCTGGGAATCCGAGTGGAGGGAGTA +
Preference number: 5 (lower is better)
Translates to: VLQGTDPARVAVNIE*FHYLFGLGIRVEGV
Trigger: TACTCCCTCCACTCGGATTCCCAGCCCGAAAAGGTAATGGAAGCATTCAATATTGACAGCAACACGGGCTGGATCAGTACCTTGAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp AAAAGCCCTGTAAATCGGTTCTCCTCTCTTCTTTCGGTCACGTTCTaGCAGCTTGATCTGGTAGACCTTCTCTGGGAACTGGGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: KSPVNRFSSLLSVTF*QLDLVDLLWELGLV
Trigger: AACAAGCCCCAGTTCCCAGAGAAGGTCTACCAGATCAAGCTGCCAGAACGTGACCGAAAGAAGAGAGGAGAACCGATTTACAGGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp TGCTATGAACAGTGTAGCTCAGCTTGTGCTTCTCATCTCTATCTGTaGCTTCAATCTGCAGGATCTCCGTGTCTGGAAGCACATCCTCGG +
Preference number: 5 (lower is better)
Translates to: CYEQCSSACASHLYL*LQSAGSPCLEAHPR
Trigger: CCGAGGATGTGCTTCCAGACACGGAGATCCTGCAGATTGAAGCCACAGATAGAGATGAGAAGCACAAGCTGAGCTACACTGTTCATAGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp AGGGGGCAAGACGTGGATATAGACAGGAATGAGGGAGTGCTTTACTaGGATGCCCCCATCTACTGCTTTGACAAAGAACGAAAGCACTGT +
Preference number: 5 (lower is better)
Translates to: RGQDVDIDRNEGVLY*DAPIYCFDKERKHC
Trigger: ACAGTGCTTTCGTTCTTTGTCAAAGCAGTAGATGGGGGCATCCCAGTAAAGCACTCCCTCATTCCTGTCTATATCCACGTCTTGCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp AGTGTTTCCTATTGGATCGCAGGATCCTCCATTCCGGCAGGGGTTTaGGAAGCAGGCTGTAATCTCAGATTCACAGTTTCTCCCCGTAAA +
Preference number: 5 (lower is better)
Translates to: SVSYWIAGSSIPAGV*EAGCNLRFTVSPRK
Trigger: TTTACGGGGAGAAACTGTGAATCTGAGATTACAGCCTGCTTCCCAAACCCCTGCCGGAATGGAGGATCCTGCGATCCAATAGGAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAAATGGTTGACTGTTTaGGAGAGGGACCACCATCTG +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLKWLTV*ERDHHL
Trigger: CAGATGGTGGTCCCTCTCCAAAACAGTCAACCATTT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAGCAGAGCATTCCGGTaGCTGTCAGCATCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRSRAFR*LSASVA
Trigger: AGCCACAGATGCTGACAGCAACCGGAATGCTCTGCT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCACTCTCTGCAGTCAGTaGGGGGCTACCACTGTCTCT +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSTLCSQ*GATTVS
Trigger: AGAGACAGTGGTAGCCCCCAACTGACTGCAGAGAGT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGGTTTTCCGCCATCCTaGGCTAGGATGGTGACTCCA +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGGFPPS*ARMVTP
Trigger: TGGAGTCACCATCCTAGCCAAGGATGGCGGAAAACC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTCACGGTCAAGGCGTTaGTCAAGCTTAATAGTGCCT +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLSRSRR*SSLIVP
Trigger: AGGCACTATTAAGCTTGACAAACGCCTTGACCGTGA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGACCTTCCACTCACTTaGCACCAGGCCCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGDLPLT*HQAQSK
Trigger: TTTGCTCTGGGCCTGGTGCAAAGTGAGTGGAAGGTC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATCTGTGAGGTTGATGTaGACAGTGGCCACAGCGCTG +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRSVRLM*TVATAL
Trigger: CAGCGCTGTGGCCACTGTCAACATCAACCTCACAGA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCCGCACTGTAGACGTCTaGGCTGAACTTGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSRTVDV*AELGRV
Trigger: AACCCTCCCAAGTTCAGCCAAGACGTCTACAGTGCG...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACGCACTGTAGACGTCTaGGCTGAACTTGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRRTVDV*AELGRV
Trigger: AACCCTCCCAAGTTCAGCCAAGACGTCTACAGTGCG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGGAATGGCTGTGGGCTaGTGGGTGCTTTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRGMAVG*WVLSSM
Trigger: CATTGAGGAAAGCACCCACAAGCCCACAGCCATTCC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCAGCATGTCCAGTTGGTaGGTGCCTGCCACGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDISMSSW*VPATGW
Trigger: CCAGCCCGTGGCAGGCACCAACCAACTGGACATGCT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAGCATGTCCAGTTGGTaGGTGCCTGCCACGGGCTGG +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSMSSW*VPATGW
Trigger: CCAGCCCGTGGCAGGCACCAACCAACTGGACATGCT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGACAGGCTCGTGAAATaGCGGTTGAGCTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSDRLVK*RLSSRK
Trigger: CTTCCTGGAGCTCAACCGCAATTTCACGAGCCTGTC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGCGGATGTTATCCGCTaGCACCAGGGCGCCGAAGTA +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQADVIR*HQGAEV
Trigger: TACTTCGGCGCCCTGGTGCAAGCGGATAACATCCGC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGGGGATGCCATTGCTCTaGTTAAGCAGGGCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRGMPLL*LSRAAV
Trigger: CACCGCCGCCCTGCTTAACAAGAGCAATGGCATCCC...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATGGCAGGGCCTCATATaGGTCTGGGAAGTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQWQGLI*VWEVLR
Trigger: CCGGAGGACTTCCCAGACCAATATGAGGCCCTGCCA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTGGCAGGGCCTCATATaGGTCTGGGAAGTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRWQGLI*VWEVLR
Trigger: CCGGAGGACTTCCCAGACCAATATGAGGCCCTGCCA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 90 bp CTCTCTGCAGTCAGTTGGGGGCTACCACTGTCTCTCACATGCACATaGAAATGGAAATGGGCAATGGTTTCATGGTCCAGGTTGGCAATT +
Preference number: 5 (lower is better)
Translates to: LSAVSWGLPLSLTCT*KWKWAMVSWSRLAI
Trigger: AATTGCCAACCTGGACCATGAAACCATTGCCCATTTCCATTTTCATGTGCATGTGAGAGACAGTGGTAGCCCCCAACTGACTGCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp ACAGACACATTGAGACTGTACAGAGGCTCCATCCGCTGCTTCCGATaGTTGGACAATGTGATAACTCCACTCTTGCTGTCCATCAGAAAG +
Preference number: 5 (lower is better)
Translates to: TDTLRLYRGSIRCFR*LDNVITPLLLSIRK
Trigger: CTTTCTGATGGACAGCAAGAGTGGAGTTATCACATTGTCCAACCATCGGAAGCAGCGGATGGAGCCTCTGTACAGTCTCAATGTGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACAATATCTGCGTCTGTaGCAGTCACCTGGGCAACAC +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRQYLRL*QSPGQH
Trigger: GTGTTGCCCAGGTGACTGCAACAGACGCAGATATTG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTGGGGACAGTGTCTCTaGTGGGGTTGCCAATGTAGA +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSWGQCL*WGCQCR
Trigger: TCTACATTGGCAACCCCACAAGAGACACTGTCCCCA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGATTCGAATAGTCACATaGACCTCACTTTCATGGCGG +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLIRIVT*TSLSWR
Trigger: CCGCCATGAAAGTGAGGTCAATGTGACTATTCGAAT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAATAGCACTTTTCCATaGAAGCCAGAGTCGGCATCA +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLNSTFP*KPESAS
Trigger: TGATGCCGACTCTGGCTTCAATGGAAAAGTGCTATT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGAGACAGGCCGCCCTTaGTCTTTGGCCCGCACAGTA +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRETGRP*SLARTV
Trigger: TACTGTGCGGGCCAAAGACAAAGGGCGGCCTGTCTC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGACAGGCATTGCTTTGTaGACAATAGTGATGGGAAGC +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLTGIAL*TIVMGS
Trigger: GCTTCCCATCACTATTGTCAACAAAGCAATGCCTGT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAGGATTAGGTGGATGTaGGACTGGCAGAACCTGCCA +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRRIRWM*DWQNLP
Trigger: TGGCAGGTTCTGCCAGTCCAACATCCACCTAATCCT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTACACGACCTTCCTATaGATGCCAATGTCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGYTTFL*MPMSGS
Trigger: GGACCCCGACATTGGCATCAATAGGAAGGTCGTGTA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTACACGACCTTCCTATaGATGCCAATGTCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSYTTFL*MPMSGS
Trigger: GGACCCCGACATTGGCATCAATAGGAAGGTCGTGTA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAACATTCAGGACATACTaGCCGCTGTCCAGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQTFRTY*PLSRPP
Trigger: GGGAGGCCTGGACAGCGGCAAGTATGTCCTGAATGT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAAACAGCATGTCCAGTaGGTTGGTGCCTGCCACGGG +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRKQHVQ*VGACHG
Trigger: CCCGTGGCAGGCACCAACCAACTGGACATGCTGTTT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGGACACAGTCCTCCATaGCAGGTGCAACGCACGTTC +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQGHSPP*QVQRTF
Trigger: GAACGTGCGTTGCACCTGCAATGGAGGACTGTGTCC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTATAATCCCATTGCTTaGCAGTGTTCGAAGACGCAG +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLYNPIA*QCSKTQ
Trigger: CTGCGTCTTCGAACACTGCAAAGCAATGGGATTATA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCTCGTGAAATTGCGGTaGAGCTCCAGGAAGACCGAG +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALILVKLR*SSRKTE
Trigger: CTCGGTCTTCCTGGAGCTCAACCGCAATTTCACGAG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGCGGATGTTATCCGCTaGCACCAGGGCGCCGAAGTA +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLADVIR*HQGAEV
Trigger: TACTTCGGCGCCCTGGTGCAAGCGGATAACATCCGC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTCTCGTTCGCACTCATaGATGTCCTCCTCACACGTG +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSRSHS*MSSSHV
Trigger: CACGTGTGAGGAGGACATCAATGAGTGCGAACGAGA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGGGATGCCATTGCTCTaGTTAAGCAGGGCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLGMPLL*LSRAAV
Trigger: CACCGCCGCCCTGCTTAACAAGAGCAATGGCATCCC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCACGATCTTATCCAGGTaGCTCCTGGAGTCACTCTGG +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSTILSR*LLESLW
Trigger: CCAGAGTGACTCCAGGAGCAACCTGGATAAGATCGT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTACAAACCAGCCTGTTaGCAACAGGCAAACGTACAA +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLYKPAC*QQANVQ
Trigger: TTGTACGTTTGCCTGTTGCAAACAGGCTGGTTTGTA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCATACTTCCATCCCTaGCCTCCGCTGGCGATCCAC +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSYFHP*PPLAIH
Trigger: GTGGATCGCCAGCGGAGGCAAGGGATGGAAGTATGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS TCA 90 bp TGTAAATCGGTTCTCCTCTCTTCTTTCGGTCACGTTCTGGCAGCTTaGTCTGGTAGACCTTCTCTGGGAACTGGGGCTTGTTGTCATTTT +
Preference number: 5 (lower is better)
Translates to: CKSVLLSSFGHVLAA*SGRPSLGTGACCHF
Trigger: AAAATGACAACAAGCCCCAGTTCCCAGAGAAGGTCTACCAGATCAAGCTGCCAGAACGTGACCGAAAGAAGAGAGGAGAACCGATTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 90 bp GACTGTGAAGTTATAAAACGGCTCATCGAAGGTCAATGGTATAGGTaGAGGGGGTGGTTTCTTAATCCATTCAATGTGGAGGCGGGCCGT +
Preference number: 5 (lower is better)
Translates to: DCEVIKRLIEGQWYR*RGWFLNPFNVEAGR
Trigger: ACGGCCCGCCTCCACATTGAATGGATTAAGAAACCACCCCCTTCACCTATACCATTGACCTTCGATGAGCCGTTTTATAACTTCACAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 90 bp GGCTGTATCTTCTGCAATGGTAAAGGAATACTGAGACTGGGTGAATaGTGGCAAGAACGTTTCAGGGGGCAAGACGTGGATATAGACAGG +
Preference number: 5 (lower is better)
Translates to: GCIFCNGKGILRLGE*WQERFRGQDVDIDR
Trigger: CCTGTCTATATCCACGTCTTGCCCCCTGAAACGTTCTTGCCATCATTCACCCAGTCTCAGTATTCCTTTACCATTGCAGAAGATACAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 90 bp ACTGTACTCCCAATGGCTGTATCTTCTGCAATGGTAAAGGAATACTaGGACTGGGTGAATGATGGCAAGAACGTTTCAGGGGGCAAGACG +
Preference number: 5 (lower is better)
Translates to: TVLPMAVSSAMVKEY*DWVNDGKNVSGGKT
Trigger: CGTCTTGCCCCCTGAAACGTTCTTGCCATCATTCACCCAGTCTCAGTATTCCTTTACCATTGCAGAAGATACAGCCATTGGGAGTACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 90 bp TCTTCATTTCCCGACAAAATAGAGAATGAAAAGGGAGGCCCATTGTaGAAGGAGTCTCTGTCTGTCACCACCAGCTGCAAGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SSFPDKIENEKGGPL*KESLSVTTSCKMLV
Trigger: CACCAGCATCTTGCAGCTGGTGGTGACAGACAGAGACTCCTTTCACAATGGGCCTCCCTTTTCATTCTCTATTTTGTCGGGAAATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp ATCATTCACATCTGTCACCTCAATGTTGACTTCAACGGGACTCTCTaGAGTCAGTTGGGGGCTACCACTGTCTCTCACATGCACATGAAA +
Preference number: 5 (lower is better)
Translates to: IIHICHLNVDFNGTL*SQLGATTVSHMHMK
Trigger: TTTCATGTGCATGTGAGAGACAGTGGTAGCCCCCAACTGACTGCAGAGAGTCCCGTTGAAGTCAACATTGAGGTGACAGATGTGAATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp ATCCACAGTAAACACAATGTCTACTTTGTCCAGGGGTATAGTGGCTaGTACTTTAAAGTGGAAAGCTGGGCTGGTTTCACGGTCAAGGCG +
Preference number: 5 (lower is better)
Translates to: IHSKHNVYFVQGYSG*YFKVESWAGFTVKA
Trigger: CGCCTTGACCGTGAAACCAGCCCAGCTTTCCACTTTAAAGTAGCAGCCACTATACCCCTGGACAAAGTAGACATTGTGTTTACTGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp CTTCTCATCTCTATCTGTGGCTTCAATCTGCAGGATCTCCGTGTCTaGAAGCACATCCTCGGAAATTGTCACATCGTAATTCGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: LLISICGFNLQDLRV*KHILGNCHIVIRLR
Trigger: TCTCAGCCGAATTACGATGTGACAATTTCCGAGGATGTGCTTCCAGACACGGAGATCCTGCAGATTGAAGCCACAGATAGAGATGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp GCAGGACATAGGTCACTTCTCCATTTGGACCTTTATCTTTGTCAATaGCTGTCACCTGATAAATCAGAGTCCCGGGTTCCGCATCCACTT +
Preference number: 5 (lower is better)
Translates to: AGHRSLLHLDLYLCQ*LSPDKSESRVPHPL
Trigger: AAGTGGATGCGGAACCCGGGACTCTGATTTATCAGGTGACAGCCATTGACAAAGATAAAGGTCCAAATGGAGAAGTGACCTATGTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp GGCAAAGTCATTGATGATGGCATAGCTGATCTGCCCATAAGTCCCTaGATCACCATCTGTGGCTCGAACATGAATTACCTTTGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: GKVIDDGIADLPISP*ITICGSNMNYLCSC
Trigger: GCAGGAACAAAGGTAATTCATGTTCGAGCCACAGATGGTGATCCAGGGACTTATGGGCAGATCAGCTATGCCATCATCAATGACTTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp TACTTTGTCCAGGGGTATAGTGGCTGCTACTTTAAAGTGGAAAGCTaGGCTGGTTTCACGGTCAAGGCGTTTGTCAAGCTTAATAGTGCC +
Preference number: 5 (lower is better)
Translates to: YFVQGYSGCYFKVES*AGFTVKAFVKLNSA
Trigger: GGCACTATTAAGCTTGACAAACGCCTTGACCGTGAAACCAGCCCAGCTTTCCACTTTAAAGTAGCAGCCACTATACCCCTGGACAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp GCAAAGCAGGTCACTTCTCCCGGGTCATCAACCCCTTTGTCTTCATaGACAGTGAAAGAGAAAGCAGAAATTACACTGGTTACCTTGTGC +
Preference number: 5 (lower is better)
Translates to: AKQVTSPGSSTPLSS*TVKEKAEITLVTLC
Trigger: GCACAAGGTAACCAGTGTAATTTCTGCTTTCTCTTTCACTGTCCATGAAGACAAAGGGGTTGATGACCCGGGAGAAGTGACCTGCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469900.1
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGACCTGTATATTCACTTaGGTCCATGCTTCCAAATCC +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLTCIFT*VHASKS
Trigger: GGATTTGGAAGCATGGACCAAAGTGAATATACAGGT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTGTGAACATAAAGCTTaGCAGTACTGCTCACTCCAT +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLCEHKA*QYCSLH
Trigger: ATGGAGTGAGCAGTACTGCAAAGCTTTATGTTCACA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGAGAGGGCTGTTGTCGTaGACATTTCCTATTCGAATA +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLRGLLS*TFPIRI
Trigger: TATTCGAATAGGAAATGTCAACGACAACAGCCCTCT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGTCTCTGGCTTCCACTaGAATGATTTCAGTACCAAT +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLVSGFH*NDFSTN
Trigger: ATTGGTACTGAAATCATTCAAGTGGAAGCCAGAGAC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGGCCGCCCTTTGTCTTaGGCCCGCACAGTAAGGTTA +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIGRPLS*ARTVRL
Trigger: TAACCTTACTGTGCGGGCCAAAGACAAAGGGCGGCC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGCCAGTATGACCCCATaGTCTCCCGATCAAGAATGT +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSASMTP*SPDQEC
Trigger: ACATTCTTGATCGGGAGACAATGGGGTCATACTGGC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGATATTGACTGTAGCATaGGAAGCCATTCCTGCCATA +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLILTVA*EAIPAI
Trigger: TATGGCAGGAATGGCTTCCAATGCTACAGTCAATAT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGCAGAGCATTCCGGTaGCTGTCAGCATCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSRAFR*LSASVA
Trigger: AGCCACAGATGCTGACAGCAACCGGAATGCTCTGCT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAACTCTCTGCAGTCAGTaGGGGGCTACCACTGTCTCT +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQTLCSQ*GATTVS
Trigger: AGAGACAGTGGTAGCCCCCAACTGACTGCAGAGAGT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCGGTGGAATAGAAGCTTaGTGTAAAGTGGAGGCCGCT +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGGGIEA*CKVEAA
Trigger: AGCGGCCTCCACTTTACACAAAGCTTCTATTCCACC...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGGGTTCCGCATCCACTaGAACAGCAGCATAGTATGG +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIGFRIH*NSSIVW
Trigger: CCATACTATGCTGCTGTTCAAGTGGATGCGGAACCC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCCGCTGCTTCCGATGGTaGGACAATGTGATAACTCCA +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGRCFRW*DNVITP
Trigger: TGGAGTTATCACATTGTCCAACCATCGGAAGCAGCG...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGTGATGACCTGCCCATaGCTGTCTATGAGGAATCGA +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSVMTCP*LSMRNR
Trigger: TCGATTCCTCATAGACAGCAATGGGCAGGTCATCAC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGAGGGAGTAAGTGACTaGTCCATTGGCTCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQEGVSD*SIGSPV
Trigger: GACTGGGGAGCCAATGGACAAGTCACTTACTCCCTC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGACCTTCCACTCACTTaGCACCAGGCCCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQDLPLT*HQAQSK
Trigger: TTTGCTCTGGGCCTGGTGCAAAGTGAGTGGAAGGTC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGTCGGGGTCCACGGCTaGAACTCTGGTCAACAGAGC +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPVGVHG*NSGQQS
Trigger: GCTCTGTTGACCAGAGTTCAAGCCGTGGACCCCGAC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGCCCGCACGCTGATGTaGTACGAAGACTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRARTLM*YEDCCS
Trigger: TGAGCAGCAGTCTTCGTACAACATCAGCGTGCGGGC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGCCCGCACGCTGATGTaGTACGAAGACTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIARTLM*YEDCCS
Trigger: TGAGCAGCAGTCTTCGTACAACATCAGCGTGCGGGC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAACATTCAGGACATACTaGCCGCTGTCCAGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGTFRTY*PLSRPP
Trigger: GGGAGGCCTGGACAGCGGCAAGTATGTCCTGAATGT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAAACAGCATGTCCAGTaGGTTGGTGCCTGCCACGGG +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLKQHVQ*VGACHG
Trigger: CCCGTGGCAGGCACCAACCAACTGGACATGCTGTTT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATCCACACAAGGATCGTaGGACCCCGGACACAGTCCT +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSTQGS*DPGHSP
Trigger: AGGACTGTGTCCGGGGTCCAACGATCCTTGTGTGGA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTCCACACAAGGATCGTaGGACCCCGGACACAGTCCT +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSTQGS*DPGHSP
Trigger: AGGACTGTGTCCGGGGTCCAACGATCCTTGTGTGGA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAGCTGGAACCACAGCTaGCCATCCACAATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRSWNHS*PSTIFR
Trigger: TCTGAAGATTGTGGATGGCAAGCTGTGGTTCCAGCT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCTCGTGAAATTGCGGTaGAGCTCCAGGAAGACCGAG +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRLVKLR*SSRKTE
Trigger: CTCGGTCTTCCTGGAGCTCAACCGCAATTTCACGAG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACGGAACGGGATGCCATaGCTCTTGTTAAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRNGMP*LLLSRA
Trigger: CGCCCTGCTTAACAAGAGCAATGGCATCCCGTTCCG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCGGAACGGGATGCCATaGCTCTTGTTAAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIRNGMP*LLLSRA
Trigger: CGCCCTGCTTAACAAGAGCAATGGCATCCCGTTCCG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGGGTCATCAACCCCTTaGTTCTCAGTTCCCGCGTCC +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIGSSTP*FSVPAS
Trigger: GGACGCGGGAACTGAGAACAAAGGGGTTGATGACCC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATCGTCAAAGCCGCAGTaGGCAGACACATCCGAGGAT +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSSKPQ*ADTSED
Trigger: ATCCTCGGATGTGTCTGCCAACTGCGGCTTTGACGA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGACTGTGGACACAGATTaGCTCATTAAGCAGATAGTG +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLTVDTD*LIKQIV
Trigger: CACTATCTGCTTAATGAGCAAATCTGTGTCCACAGT...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 90 bp CCCGGTCCAACTGGTCGGCTACATAAACGATTCCAGTTGAGCTATTaGTGGCAAACTGCTGTGTATCTGTCAAGACTGAGTAAGTCACTT +
Preference number: 5 (lower is better)
Translates to: PGPTGRLHKRFQLSY*WQTAVYLSRLSKSL
Trigger: AAGTGACTTACTCAGTCTTGACAGATACACAGCAGTTTGCCATCAATAGCTCAACTGGAATCGTTTATGTAGCCGACCAGTTGGACCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 90 bp GTCTTCATCTCGAGCAGTCACCTGCAGCACGCTTGTTCCAATGCGTaGGTTTTCCTTTACAGATCCAACAACAGCAAAGTCTGGGAAATA +
Preference number: 5 (lower is better)
Translates to: VFISSSHLQHACSNA*VFLYRSNNSKVWEI
Trigger: TATTTCCCAGACTTTGCTGTTGTTGGATCTGTAAAGGAAAACTCACGCATTGGAACAAGCGTGCTGCAGGTGACTGCTCGAGATGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000528921.1
CDS TCA 90 bp GTCCAACACAAACTCCTCCTCTTCATTTCCCGACAAAATAGAGAATaGAAAGGGAGGCCCATTGTGAAAGGAGTCTCTGTCTGTCACCAC +
Preference number: 5 (lower is better)
Translates to: VQHKLLLFISRQNRE*KGRPIVKGVSVCHH
Trigger: GTGGTGACAGACAGAGACTCCTTTCACAATGGGCCTCCCTTTTCATTCTCTATTTTGTCGGGAAATGAAGAGGAGGAGTTTGTGTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp GACCACTCTCTGCCTTGTCCCTGGCTTCTATTTTCAAAGAATAATTaGCTTTGGATTCCCGGTCCAACTGGTCGGCTACATAAACGATTC +
Preference number: 5 (lower is better)
Translates to: DHSLPCPWLLFSKNN*LWIPGPTGRLHKRF
Trigger: GAATCGTTTATGTAGCCGACCAGTTGGACCGGGAATCCAAAGCCAATTATTCTTTGAAAATAGAAGCCAGGGACAAGGCAGAGAGTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp CGCATCCACTTGAACAGCAGCATAGTATGGGAGGCCCACAAAGACTaGAGAATTGTCATTTATGTCTTCAATGTTAACCCTGACCACCAC +
Preference number: 5 (lower is better)
Translates to: RIHLNSSIVWEAHKD*RIVIYVFNVNPDHH
Trigger: GTGGTGGTCAGGGTTAACATTGAAGACATAAATGACAATTCTCCAGTCTTTGTGGGCCTCCCATACTATGCTGCTGTTCAAGTGGATGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp AATCAGAGTCCCGGGTTCCGCATCCACTTGAACAGCAGCATAGTATaGGAGGCCCACAAAGACTGGAGAATTGTCATTTATGTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: NQSPGFRIHLNSSIV*EAHKDWRIVIYVFN
Trigger: ATTGAAGACATAAATGACAATTCTCCAGTCTTTGTGGGCCTCCCATACTATGCTGCTGTTCAAGTGGATGCGGAACCCGGGACTCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp ACAATGTCTACTTTGTCCAGGGGTATAGTGGCTGCTACTTTAAAGTaGAAAGCTGGGCTGGTTTCACGGTCAAGGCGTTTGTCAAGCTTA +
Preference number: 5 (lower is better)
Translates to: TMSTLSRGIVAATLK*KAGLVSRSRRLSSL
Trigger: TAAGCTTGACAAACGCCTTGACCGTGAAACCAGCCCAGCTTTCCACTTTAAAGTAGCAGCCACTATACCCCTGGACAAAGTAGACATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTTTCTCTGCCAGCTTTaGAGCCACACGAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGFLCQL*SHTSFS
Trigger: AGAGAAACTCGTGTGGCTCAAAAGCTGGCAGAGAAA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTTAGCATCCTCCACATaGATGGTCAGCAGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGLASST*MVSSLH
Trigger: ATGGAGACTGCTGACCATCAATGTGGAGGATGCTAA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCAAATGGTTGACTGTTTaGGAGAGGGACCACCATCTG +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSKWLTV*ERDHHL
Trigger: CAGATGGTGGTCCCTCTCCAAAACAGTCAACCATTT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACCACCACCCAAATGGTaGACTGTTTTGGAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQPPPKW*TVLERD
Trigger: GTCCCTCTCCAAAACAGTCAACCATTTGGGTGGTGG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGCACATCCTCGGAAATaGTCACATCGTAATTCGGCT +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSAHPRK*SHRNSA
Trigger: AGCCGAATTACGATGTGACAATTTCCGAGGATGTGC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGGTTTTCCGCCATCCTaGGCTAGGATGGTGACTCCA +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIGFPPS*ARMVTP
Trigger: TGGAGTCACCATCCTAGCCAAGGATGGCGGAAAACC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCTGGACTGGTGGCATaGATGCTTAGGATGGGTGTG +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSGLVA*MLRMGV
Trigger: CACACCCATCCTAAGCATCAATGCCACCAGTCCAGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAATCGGGATCTATGGCTaGAACTTGAGTGACCAAGTG +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRIGIYG*NLSDQV
Trigger: CACTTGGTCACTCAAGTTCAAGCCATAGATCCCGAT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCTCACTTGTGTGAGTTaGGTGCCAACAGGCATCCCT +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRLTCVS*VPTGIP
Trigger: AGGGATGCCTGTTGGCACCAAACTCACACAAGTGAG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACTGATCCAGCCCGTGTaGCTGTCAATATTGAATGCT +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRLIQPV*LSILNA
Trigger: AGCATTCAATATTGACAGCAACACGGGCTGGATCAG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATCTGTGAGGTTGATGTaGACAGTGGCCACAGCGCTG +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSVRLM*TVATAL
Trigger: CAGCGCTGTGGCCACTGTCAACATCAACCTCACAGA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGAATGGCTGTGGGCTaGTGGGTGCTTTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRGMAVG*WVLSSM
Trigger: CATTGAGGAAAGCACCCACAAGCCCACAGCCATTCC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAGGTGTCTTCTAGCATaGGACAGCTTCTGGATCAGG +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIRCLLA*DSFWIR
Trigger: CCTGATCCAGAAGCTGTCCAATGCTAGAAGACACCT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGGACACAGTCCTCCATaGCAGGTGCAACGCACGTTC +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPGHSPP*QVQRTF
Trigger: GAACGTGCGTTGCACCTGCAATGGAGGACTGTGTCC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATCCACACAAGGATCGTaGGACCCCGGACACAGTCCT +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSTQGS*DPGHSP
Trigger: AGGACTGTGTCCGGGGTCCAACGATCCTTGTGTGGA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAGCTGGAACCACAGCTaGCCATCCACAATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALISWNHS*PSTIFR
Trigger: TCTGAAGATTGTGGATGGCAAGCTGTGGTTCCAGCT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGACAGGCTCGTGAAATaGCGGTTGAGCTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRDRLVK*RLSSRK
Trigger: CTTCCTGGAGCTCAACCGCAATTTCACGAGCCTGTC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTGCAGCGGCAGCTCATaGTTATTCAGTATCACCGAG +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALICSGSS*LFSITE
Trigger: CTCGGTGATACTGAATAACAATGAGCTGCCGCTGCA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCTCGTTCGCACTCATaGATGTCCTCCTCACACGTG +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSRSHS*MSSSHV
Trigger: CACGTGTGAGGAGGACATCAATGAGTGCGAACGAGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTCGTCAAAGCCGCAGTaGGCAGACACATCCGAGGAT +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSSKPQ*ADTSED
Trigger: ATCCTCGGATGTGTCTGCCAACTGCGGCTTTGACGA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 90 bp CGAGAACCTCACTGCTCAGTGATGGGAAGCCACTATCTATTGATCTaGCTTTCAAAGTGCAGTGTTGTACTAACTCATGGTCCAGCATTC +
Preference number: 5 (lower is better)
Translates to: REPHCSVMGSHYLLI*LSKCSVVLTHGPAF
Trigger: GAATGCTGGACCATGAGTTAGTACAACACTGCACTTTGAAAGTCAGATCAATAGATAGTGGCTTCCCATCACTGAGCAGTGAGGTTCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp GCTGGTTCCCACTGGGACACTTTCATTCACATAAGCATCATACAGTaGTTGCTGAAATTCTGGGGTGTGGTCATTTGCATCTTCTATGCT +
Preference number: 5 (lower is better)
Translates to: AGSHWDTFIHISIIQ*LLKFWGVVICIFYA
Trigger: AGCATAGAAGATGCAAATGACCACACCCCAGAATTTCAGCAACCACTGTATGATGCTTATGTGAATGAAAGTGTCCCAGTGGGAACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGGACACTATTCTGTATTaGATATCCCAGGATAGATCT +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLDTILY*ISQDRS
Trigger: AGATCTATCCTGGGATATCAAATACAGAATAGTGTC...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCAATATCTGCGTCTGTaGCAGTCACCTGGGCAACAC +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIQYLRL*QSPGQH
Trigger: GTGTTGCCCAGGTGACTGCAACAGACGCAGATATTG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAATAGCACTTTTCCATaGAAGCCAGAGTCGGCATCA +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGNSTFP*KPESAS
Trigger: TGATGCCGACTCTGGCTTCAATGGAAAAGTGCTATT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTTCTGTGGGCGCCCATaGTCCACTGCCTTTATCGTT +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIFCGRP*STAFIV
Trigger: AACGATAAAGGCAGTGGACAATGGGCGCCCACAGAA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTTCTGTGGGCGCCCATaGTCCACTGCCTTTATCGTT +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRFCGRP*STAFIV
Trigger: AACGATAAAGGCAGTGGACAATGGGCGCCCACAGAA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAATGTTGAGAATGTGCTaGTCCTGGGCCTCATGGTCC +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLMLRMC*SWASWS
Trigger: GGACCATGAGGCCCAGGACAAGCACATTCTCAACAT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAATGTTGAGAATGTGCTaGTCCTGGGCCTCATGGTCC +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGMLRMC*SWASWS
Trigger: GGACCATGAGGCCCAGGACAAGCACATTCTCAACAT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGGGTTCCGCATCCACTaGAACAGCAGCATAGTATGG +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLGFRIH*NSSIVW
Trigger: CCATACTATGCTGCTGTTCAAGTGGATGCGGAACCC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGATATATATGATGCCTaGGCCTTCTGGACTGGTGGC +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQDIYDA*AFWTGG
Trigger: GCCACCAGTCCAGAAGGCCAAGGCATCATATATATC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCCCCCCATCTACTGCTTaGACAAAGAACGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIPPSTA*TKNEST
Trigger: AGTGCTTTCGTTCTTTGTCAAAGCAGTAGATGGGGG...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAACACAATGTCTACTTaGTCCAGGGGTATAGTGGCT +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRNTMST*SRGIVA
Trigger: AGCCACTATACCCCTGGACAAAGTAGACATTGTGTT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCCTCACTTGTGTGAGTTaGGTGCCAACAGGCATCCCT +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDILTCVS*VPTGIP
Trigger: AGGGATGCCTGTTGGCACCAAACTCACACAAGTGAG...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCATCAATAGCTCTCACTaGTGTGAGTTTGGTGCCAAC +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGINSSH*CEFGAN
Trigger: GTTGGCACCAAACTCACACAAGTGAGAGCTATTGAT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGAGGGAGTAAGTGACTaGTCCATTGGCTCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPEGVSD*SIGSPV
Trigger: GACTGGGGAGCCAATGGACAAGTCACTTACTCCCTC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAATATGGTAGCTCACTaGGCGATTAACGTCGGATGT +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRNMVAH*AINVGC
Trigger: ACATCCGACGTTAATCGCCAAGTGAGCTACCATATT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGGATTAGGTGGATGTaGGACTGGCAGAACCTGCCA +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGRIRWM*DWQNLP
Trigger: TGGCAGGTTCTGCCAGTCCAACATCCACCTAATCCT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGGTGTCTTCTAGCATaGGACAGCTTCTGGATCAGG +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQRCLLA*DSFWIR
Trigger: CCTGATCCAGAAGCTGTCCAATGCTAGAAGACACCT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTATAATCCCATTGCTTaGCAGTGTTCGAAGACGCAG +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGYNPIA*QCSKTQ
Trigger: CTGCGTCTTCGAACACTGCAAAGCAATGGGATTATA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACAGACAATGCTCCACTGGGACAGAAGCCCAGCCAATCTGCTTCCACTTTTCTGTACATTATAATCCCATaGCTTTGCAGTGTTCGAAGA +
Preference number: 5 (lower is better)
Translates to: TDNAPLGQKPSQSASTFLYIIIP*LCSVRR
Trigger: TCTTCGAACACTGCAAAGCAATGGGATTATAATGTA...CAGAAAAGTGGAAGCAGATTGGCTGGGCTTCTGTCCCAGTGGAGCATTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCACGATCTTATCCAGGTaGCTCCTGGAGTCACTCTGG +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDITILSR*LLESLW
Trigger: CCAGAGTGACTCCAGGAGCAACCTGGATAAGATCGT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATGGAATCAAGCTTGCTaGTTGGGACAGTATGACTTG +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRWNQAC*LGQYDL
Trigger: CAAGTCATACTGTCCCAACAAGCAAGCTTGATTCCA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCAGTTACCTCAAAAGTTaGCAGACCAACAGCGTGGAT +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSYLKS*QTNSVD
Trigger: ATCCACGCTGTTGGTCTGCAAACTTTTGAGGTAACT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGTCACTATGGAGGCATaGTCGTCACCAGAATCTGAC +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQVTMEA*SSPESD
Trigger: GTCAGATTCTGGTGACGACAATGCCTCCATAGTGAC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGTTGTAGTTCTGTCCTaGGTCCATGACAGACACTTC +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIVVVLS*VHDRHF
Trigger: GAAGTGTCTGTCATGGACCAAGGACAGAACTACAAC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS TCA 90 bp GTCACCACTGCATATGTTGGCTCTTTTTCCAACGAGAAAGGAACATaGGTGACTACATGGATTGTTGGGGCATGTTCATTTATGCGCTCA +
Preference number: 5 (lower is better)
Translates to: VTTAYVGSFSNEKGT*VTTWIVGACSFMRS
Trigger: TGAGCGCATAAATGAACATGCCCCAACAATCCATGTAGTCACTCATGTTCCTTTCTCGTTGGAAAAAGAGCCAACATATGCAGTGGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 90 bp GTCAGTTTTTCATTGGAACTGGAGTCAGGATCTTCAGCCTGGATCTaGATGACAGATACGTCCTTTGGAGAGTTTTCCATGACAACAGGA +
Preference number: 5 (lower is better)
Translates to: VSFSLELESGSSAWI*MTDTSFGEFSMTTG
Trigger: TCCTGTTGTCATGGAAAACTCTCCAAAGGACGTATCTGTCATTCAGATCCAGGCTGAAGATCCTGACTCCAGTTCCAATGAAAAACTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000528921.1
CDS TCA 90 bp TCATATTATAGATGGACCTCTGCTCTGCATCCAAAGGTTTTGCGATaGCAATTGTCCCAACACCCTTCTCTGCATCAAAAGCGCTGTCAA +
Preference number: 5 (lower is better)
Translates to: SYYRWTSALHPKVLR*QLSQHPSLHQKRCQ
Trigger: TTGACAGCGCTTTTGATGCAGAGAAGGGTGTTGGGACAATTGTCATCGCAAAACCTTTGGATGCAGAGCAGAGGTCCATCTATAATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 90 bp CTGCTTCCACTTTTCTGTAACAAACAGGGTGAAGTACCCAAGATGTaGTGTCTACACTTGAGTCTGATGCTGAGTCTCCACAAAGGGAAT +
Preference number: 5 (lower is better)
Translates to: LLPLFCNKQGEVPKM*CLHLSLMLSLHKGN
Trigger: ATTCCCTTTGTGGAGACTCAGCATCAGACTCAAGTGTAGACATCACATCTTGGGTACTTCACCCTGTTTGTTACAGAAAAGTGGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp CATGTTCATTTATGCGCTCAATGTGAACATAAAGCTTTGCAGTACTaGTCACTCCATTGTTCCCATACAGTTTCATTCCCCGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: HVHLCAQCEHKALQY*SLHCSHTVSFPGPQ
Trigger: CTGTGGACCGGGGAATGAAACTGTATGGGAACAATGGAGTGAGCAGTACTGCAAAGCTTTATGTTCACATTGAGCGCATAAATGAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp TGTTGGGGCATGTTCATTTATGCGCTCAATGTGAACATAAAGCTTTaGAGTACTGCTCACTCCATTGTTCCCATACAGTTTCATTCCCCG +
Preference number: 5 (lower is better)
Translates to: CWGMFIYALNVNIKL*STAHSIVPIQFHSP
Trigger: CGGGGAATGAAACTGTATGGGAACAATGGAGTGAGCAGTACTGCAAAGCTTTATGTTCACATTGAGCGCATAAATGAACATGCCCCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp GACACTTTCATTCACATAAGCATCATACAGTGGTTGCTGAAATTCTaGGGTGTGGTCATTTGCATCTTCTATGCTGATGGTGACCTGTGC +
Preference number: 5 (lower is better)
Translates to: DTFIHISIIQWLLKF*GVVICIFYADGDLC
Trigger: GCACAGGTCACCATCAGCATAGAAGATGCAAATGACCACACCCCAGAATTTCAGCAACCACTGTATGATGCTTATGTGAATGAAAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp TCGTTGACATTTCCTATTCGAATAGTCACATTGACCTCACTTTCATaGCGGTATGGTGAACCCCAGTCAGAGGCTCTAACAATGAATCTG +
Preference number: 5 (lower is better)
Translates to: SLTFPIRIVTLTSLS*RYGEPQSEALTMNL
Trigger: CAGATTCATTGTTAGAGCCTCTGACTGGGGTTCACCATACCGCCATGAAAGTGAGGTCAATGTGACTATTCGAATAGGAAATGTCAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp AGAGTCGGCATCATAGGCTTTAATCTTCAGAATGTTAGCACCAACTaGCAGATCCTCCTTTACAGCCACATCAGAAGGAAAAGACTTGTC +
Preference number: 5 (lower is better)
Translates to: RVGIIGFNLQNVSTN*QILLYSHIRRKRLV
Trigger: GACAAGTCTTTTCCTTCTGATGTGGCTGTAAAGGAGGATCTGCCAGTTGGTGCTAACATTCTGAAGATTAAAGCCTATGATGCCGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp AACTGTTTAAAAGGGTCCCCATCGATAATGATATATATGATGCCTTaGCCTTCTGGACTGGTGGCATTGATGCTTAGGATGGGTGTGTTC +
Preference number: 5 (lower is better)
Translates to: NCLKGSPSIMIYMMP*PSGLVALMLRMGVF
Trigger: GAACACACCCATCCTAAGCATCAATGCCACCAGTCCAGAAGGCCAAGGCATCATATATATCATTATCGATGGGGACCCTTTTAAACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCACAGTGGCCAAAAGCTaGAAAAGCAGGAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDITVAKS*KSRRMR
Trigger: CCTCATCCTCCTGCTTTTCAAGCTTTTGGCCACTGT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCACCTGTATATTCACTTaGGTCCATGCTTCCAAATCC +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGTCIFT*VHASKS
Trigger: GGATTTGGAAGCATGGACCAAAGTGAATATACAGGT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTCAAAGAGAGGGCTGTaGTCGTTGACATTTCCTATT +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSKRGL*SLTFPI
Trigger: AATAGGAAATGTCAACGACAACAGCCCTCTCTTTGA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGTGTGGAGGTTTTCATaGACATCCACCACTTCCACC +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLVWRFS*TSTTST
Trigger: GGTGGAAGTGGTGGATGTCAATGAAAACCTCCACAC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATCACCTGCAGCACGCTaGTTCCAATGCGTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSPAAR*FQCVSF
Trigger: AAAACTCACGCATTGGAACAAGCGTGCTGCAGGTGA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGCCAGTATGACCCCATaGTCTCCCGATCAAGAATGT +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGASMTP*SPDQEC
Trigger: ACATTCTTGATCGGGAGACAATGGGGTCATACTGGC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACCACCACCCAAATGGTaGACTGTTTTGGAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPPPPKW*TVLERD
Trigger: GTCCCTCTCCAAAACAGTCAACCATTTGGGTGGTGG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGGTGGAATAGAAGCTTaGTGTAAAGTGGAGGCCGCT +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLGGIEA*CKVEAA
Trigger: AGCGGCCTCCACTTTACACAAAGCTTCTATTCCACC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCACAGGCATTGCTTTGTaGACAATAGTGATGGGAAGC +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALITGIAL*TIVMGS
Trigger: GCTTCCCATCACTATTGTCAACAAAGCAATGCCTGT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATCTGGACTGGTGGCATaGATGCTTAGGATGGGTGTG +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSGLVA*MLRMGV
Trigger: CACACCCATCCTAAGCATCAATGCCACCAGTCCAGA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGATATATATGATGCCTaGGCCTTCTGGACTGGTGGC +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGDIYDA*AFWTGG
Trigger: GCCACCAGTCCAGAAGGCCAAGGCATCATATATATC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACGTCGCTGGCTCTTATaGTCAGCTTGTAAGCAGATG +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLRRWLL*SACKQM
Trigger: CATCTGCTTACAAGCTGACAATAAGAGCCAGCGACG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTACGCTGCTTCCGATGGTaGGACAATGTGATAACTCCA +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLRCFRW*DNVITP
Trigger: TGGAGTTATCACATTGTCCAACCATCGGAAGCAGCG...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGAACATGAATTACCTTaGTTCCTGCAGCCACGTTCT +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIEHELP*FLQPRS
Trigger: AGAACGTGGCTGCAGGAACAAAGGTAATTCATGTTC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCATGAGGAATCGATCCTaGGCAAAGTCATTGATGATG +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSMRNRS*AKSLMM
Trigger: CATCATCAATGACTTTGCCAAGGATCGATTCCTCAT...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGATCTATGGCTTGAACTaGAGTGACCAAGTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRIYGLN*SDQVAP
Trigger: AGGGGCCACTTGGTCACTCAAGTTCAAGCCATAGAT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAACGAATATGCCCCCTTaGTTATTTTCTGGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQTNMPP*LFSGRS
Trigger: GGAACGGCCAGAAAATAACAAAGGGGGCATATTCGT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCATCAATAGCTCTCACTaGTGTGAGTTTGGTGCCAAC +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIINSSH*CEFGAN
Trigger: GTTGGCACCAAACTCACACAAGTGAGAGCTATTGAT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCTGATCCAGCCCGTGTaGCTGTCAATATTGAATGCT +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRLIQPV*LSILNA
Trigger: AGCATTCAATATTGACAGCAACACGGGCTGGATCAG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCACACACTGGGCTATaGTCATTCACATCACTGACG +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSHTGL*SFTSLT
Trigger: CGTCAGTGATGTGAATGACAATAGCCCAGTGTGTGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGTAAACACCGGGCTGTaGTCATTCACATCAGAAATA +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSVNTGL*SFTSEI
Trigger: TATTTCTGATGTGAATGACAACAGCCCGGTGTTTAC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTATAATCCCATTGCTTaGCAGTGTTCGAAGACGCAG +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIYNPIA*QCSKTQ
Trigger: CTGCGTCTTCGAACACTGCAAAGCAATGGGATTATA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATGCAGCGGCAGCTCATaGTTATTCAGTATCACCGAG +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLCSGSS*LFSITE
Trigger: CTCGGTGATACTGAATAACAATGAGCTGCCGCTGCA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAGCCCAGCTTTACAATaGCAGATGAAAGTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRSPALQ*QMKVFP
Trigger: AGGAAACACTTTCATCTGCAATTGTAAAGCTGGGCT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTTGCGGAAGACCTTCTaGCGGAAGACTATGAAGAGA +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRLRKTF*RKTMKR
Trigger: TCTCTTCATAGTCTTCCGCAAGAAGGTCTTCCGCAA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACATTTCCAAACACATTaGCCACTCCCAAAATGCAGT +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRHFQTH*PLPKCS
Trigger: ACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 90 bp ATCTTGTACTCATTCAACCACTTTCCTTCCTTAGCCAGGAAGAACTaGTCTAAAGGATCCCCAGCCACAATGGAAACAGATTCGATCTCT +
Preference number: 5 (lower is better)
Translates to: ILYSFNHFPSLARKN*SKGSPATMETDSIS
Trigger: AGAGATCGAATCTGTTTCCATTGTGGCTGGGGATCCTTTAGATCAGTTCTTCCTGGCTAAGGAAGGAAAGTGGTTGAATGAGTACAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 90 bp TCCTATTCGAATAGTCACATTGACCTCACTTTCATGGCGGTATGGTaGACCCCAGTCAGAGGCTCTAACAATGAATCTGTAAATTTCTGG +
Preference number: 5 (lower is better)
Translates to: SYSNSHIDLTFMAVW*TPVRGSNNESVNFW
Trigger: CCAGAAATTTACAGATTCATTGTTAGAGCCTCTGACTGGGGTTCACCATACCGCCATGAAAGTGAGGTCAATGTGACTATTCGAATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp ATAGACAGGAATGAGGGAGTGCTTTACTGGGATGCCCCCATCTACTaGTTTGACAAAGAACGAAAGCACTGTATTTTTCAGCTGGTTAAA +
Preference number: 5 (lower is better)
Translates to: IDRNEGVLYWDAPIY*FDKERKHCIFQLVK
Trigger: TTTAACCAGCTGAAAAATACAGTGCTTTCGTTCTTTGTCAAAGCAGTAGATGGGGGCATCCCAGTAAAGCACTCCCTCATTCCTGTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp GCGCTCATAATCCAGGGCCTTCTGAGTGGTGATGACTCCAGAATATaGATTTATGGTAAAGATCCCATTAATGTCTCCATCTTTGACTTC +
Preference number: 5 (lower is better)
Translates to: ALIIQGLLSGDDSRI*IYGKDPINVSIFDF
Trigger: GAAGTCAAAGATGGAGACATTAATGGGATCTTTACCATAAATCCATATTCTGGAGTCATCACCACTCAGAAGGCCCTGGATTATGAGCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCACCACTGCATATGTaGGCTCTTTTTCCAACGAGA +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSPLHM*ALFPTR
Trigger: TCTCGTTGGAAAAAGAGCCAACATATGCAGTGGTGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCCCTTGTCTTTTGCTaGAAGAGTGAGATTGTAGCC +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSLVFC*KSEIVA
Trigger: GGCTACAATCTCACTCTTCAAGCAAAAGACAAGGGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTTTCTCTGCCAGCTTTaGAGCCACACGAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRFLCQL*SHTSFS
Trigger: AGAGAAACTCGTGTGGCTCAAAAGCTGGCAGAGAAA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGCACATCCTCGGAAATaGTCACATCGTAATTCGGCT +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRAHPRK*SHRNSA
Trigger: AGCCGAATTACGATGTGACAATTTCCGAGGATGTGC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGTCTCTGACCATTATGTaGAGAATGTGCTTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSLTIM*RMCLSW
Trigger: CCAGGACAAGCACATTCTCAACATAATGGTCAGAGA...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATCTCTGACCATTATGTaGAGAATGTGCTTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSLTIM*RMCLSW
Trigger: CCAGGACAAGCACATTCTCAACATAATGGTCAGAGA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGTTTCATGGTCCAGGTaGGCAATTGTTCTGATTGCA +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQVSWSR*AIVLIA
Trigger: TGCAATCAGAACAATTGCCAACCTGGACCATGAAAC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATCTGTCACCTCAATGTaGACTTCAACGGGACTCTCT +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSVTSM*TSTGLS
Trigger: AGAGAGTCCCGTTGAAGTCAACATTGAGGTGACAGA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTCTGTCACCTCAATGTaGACTTCAACGGGACTCTCT +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSVTSM*TSTGLS
Trigger: AGAGAGTCCCGTTGAAGTCAACATTGAGGTGACAGA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACGATTTCCAACTGCATaGACAATAGCAACTTTGGTT +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRRFPTA*TIATLV
Trigger: AACCAAAGTTGCTATTGTCAATGCAGTTGGAAATCG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCACTCCATACTCAATGTaGGACAAGTCAGAGTTGAAT +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGTPYSM*DKSELN
Trigger: ATTCAACTCTGACTTGTCCAACATTGAGTATGGAGT...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAACACAGGCATTGCTTaGTTGACAATAGTGATGGGA +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALINTGIA*LTIVMG
Trigger: TCCCATCACTATTGTCAACAAAGCAATGCCTGTGTT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACGTCGCTGGCTCTTATaGTCAGCTTGTAAGCAGATG +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPRRWLL*SACKQM
Trigger: CATCTGCTTACAAGCTGACAATAAGAGCCAGCGACG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGTGATAACTCCACTCTaGCTGTCCATCAGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIVITPL*LSIRKL
Trigger: GAGCTTTCTGATGGACAGCAAGAGTGGAGTTATCAC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGTGATGACCTGCCCATaGCTGTCTATGAGGAATCGA +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPVMTCP*LSMRNR
Trigger: TCGATTCCTCATAGACAGCAATGGGCAGGTCATCAC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAATCTATGGCTTGAACTaGAGTGACCAAGTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPIYGLN*SDQVAP
Trigger: AGGGGCCACTTGGTCACTCAAGTTCAAGCCATAGAT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAATCGGGATCTATGGCTaGAACTTGAGTGACCAAGTG +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGIGIYG*NLSDQV
Trigger: CACTTGGTCACTCAAGTTCAAGCCATAGATCCCGAT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATCACGGTCAAGGCGTTaGTCAAGCTTAATAGTGCCT +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSRSRR*SSLIVP
Trigger: AGGCACTATTAAGCTTGACAAACGCCTTGACCGTGA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAACACAATGTCTACTTaGTCCAGGGGTATAGTGGCT +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRNTMST*SRGIVA
Trigger: AGCCACTATACCCCTGGACAAAGTAGACATTGTGTT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATCACACACTGGGCTATaGTCATTCACATCACTGACG +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSHTGL*SFTSLT
Trigger: CGTCAGTGATGTGAATGACAATAGCCCAGTGTGTGA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAGATCTTAAATTTCCCTaGTTCGTTCCCAGACCGGAT +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQDLKFP*FVPRPD
Trigger: ATCCGGTCTGGGAACGAACAAGGGAAATTTAAGATC...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATTGCAGTTGATGACATaGCAGGAATGCCACTGTCTA +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLQLMT*QECHCL
Trigger: TAGACAGTGGCATTCCTGCAATGTCATCAACTGCAA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAGGTGTCTTCTAGCATaGGACAGCTTCTGGATCAGG +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPRCLLA*DSFWIR
Trigger: CCTGATCCAGAAGCTGTCCAATGCTAGAAGACACCT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATGCAGCGGCAGCTCATaGTTATTCAGTATCACCGAG +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPCSGSS*LFSITE
Trigger: CTCGGTGATACTGAATAACAATGAGCTGCCGCTGCA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCAGCCCAGCTTTACAATaGCAGATGAAAGTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALISPALQ*QMKVFP
Trigger: AGGAAACACTTTCATCTGCAATTGTAAAGCTGGGCT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATTGCGGAAGACCTTCTaGCGGAAGACTATGAAGAGA +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGLRKTF*RKTMKR
Trigger: TCTCTTCATAGTCTTCCGCAAGAAGGTCTTCCGCAA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATTGCGGAAGACCTTCTaGCGGAAGACTATGAAGAGA +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLLRKTF*RKTMKR
Trigger: TCTCTTCATAGTCTTCCGCAAGAAGGTCTTCCGCAA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGACCAAAAAGCCTCATGTaGCTCTTCATTGATACCTTT +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRPKSLM*LFIDTF
Trigger: AAAGGTATCAATGAAGAGCAACATGAGGCTTTTTGG...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGTGCAAGCACATATTaGTACATAGGCCCAGACACA +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSASTY*YIGPDT
Trigger: TGTGTCTGGGCCTATGTACAAATATGTGCTTGCACT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAGTTACCTCAAAAGTTaGCAGACCAACAGCGTGGAT +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSYLKS*QTNSVD
Trigger: ATCCACGCTGTTGGTCTGCAAACTTTTGAGGTAACT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 90 bp TCTACAGTAAATTCATTGTCCCGATCTCCATTCACAATGGAAAAATaGATCTGTCCGTTGGGCTGGCTGTCTACATCTTCTGCTATTAGC +
Preference number: 5 (lower is better)
Translates to: STVNSLSRSPFTMEK*ICPLGWLSTSSAIS
Trigger: GCTAATAGCAGAAGATGTAGACAGCCAGCCCAACGGACAGATTCATTTTTCCATTGTGAATGGAGATCGGGACAATGAATTTACTGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp CACCTCCAGTTTATAAACCTCCTTCTTAACAGTATTCAGTGGCCGTaGTGTAACAATCAGACCCGACCGAGGATTAATTTTAAAGTACAC +
Preference number: 5 (lower is better)
Translates to: HLQFINLLLNSIQWP*CNNQTRPRINFKVH
Trigger: GTGTACTTTAAAATTAATCCTCGGTCGGGTCTGATTGTTACAGCACGGCCACTGAATACTGTTAAGAAGGAGGTTTATAAACTGGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp CTATCTATTGATCTGACTTTCAAAGTGCAGTGTTGTACTAACTCATaGTCCAGCATTCGTGCTGTCAGGATTAAGCCACTTGAGCTATCT +
Preference number: 5 (lower is better)
Translates to: LSIDLTFKVQCCTNS*SSIRAVRIKPLELS
Trigger: AGATAGCTCAAGTGGCTTAATCCTGACAGCACGAATGCTGGACCATGAGTTAGTACAACACTGCACTTTGAAAGTCAGATCAATAGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp CCATCTACTGCTTTGACAAAGAACGAAAGCACTGTATTTTTCAGCTaGTTAAAATTACCCTTTGTGACCATCCAGCCATTGTCAGGATCG +
Preference number: 5 (lower is better)
Translates to: PSTALTKNESTVFFS*LKLPFVTIQPLSGS
Trigger: CGATCCTGACAATGGCTGGATGGTCACAAAGGGTAATTTTAACCAGCTGAAAAATACAGTGCTTTCGTTCTTTGTCAAAGCAGTAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATGTGAACATAAAGCTTaGCAGTACTGCTCACTCCAT +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQCEHKA*QYCSLH
Trigger: ATGGAGTGAGCAGTACTGCAAAGCTTTATGTTCACA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTCACCACTGCATATGTaGGCTCTTTTTCCAACGAGA +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDISPLHM*ALFPTR
Trigger: TCTCGTTGGAAAAAGAGCCAACATATGCAGTGGTGA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTCCCTTGTCTTTTGCTaGAAGAGTGAGATTGTAGCC +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRSLVFC*KSEIVA
Trigger: GGCTACAATCTCACTCTTCAAGCAAAAGACAAGGGA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTTTAAATCTCCTTCCTaGTTTGTCACCTCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGFKSPS*FVTSSL
Trigger: TAAACTGGAGGTGACAAACAAGGAAGGAGATTTAAA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCATTCGAATAGTCACATaGACCTCACTTTCATGGCGG +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIIRIVT*TSLSWR
Trigger: CCGCCATGAAAGTGAGGTCAATGTGACTATTCGAAT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGAGGGCTGTTGTCGTaGACATTTCCTATTCGAATA +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQRGLLS*TFPIRI
Trigger: TATTCGAATAGGAAATGTCAACGACAACAGCCCTCT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATTAGCATCCTCCACATaGATGGTCAGCAGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPLASST*MVSSLH
Trigger: ATGGAGACTGCTGACCATCAATGTGGAGGATGCTAA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAGCGGATGGCACCACTaGCTTTATCTATTTCAAATC +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRSGWHH*LYLFQI
Trigger: GATTTGAAATAGATAAAGCAAGTGGTGCCATCCGCT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTATGTCAGTTTTTCATaGGAACTGGAGTCAGGATCT +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIYVSFS*ELESGS
Trigger: AGATCCTGACTCCAGTTCCAATGAAAAACTGACATA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCACTCCATACTCAATGTaGGACAAGTCAGAGTTGAAT +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALITPYSM*DKSELN
Trigger: ATTCAACTCTGACTTGTCCAACATTGAGTATGGAGT...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAACACAGGCATTGCTTaGTTGACAATAGTGATGGGA +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQNTGIA*LTIVMG
Trigger: TCCCATCACTATTGTCAACAAAGCAATGCCTGTGTT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTCAGGATTAAGCCACTaGAGCTATCTATGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSSGLSH*SYLCEN
Trigger: ATTTTCACATAGATAGCTCAAGTGGCTTAATCCTGA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AACTGCTTCCATTTCCAAACACATTTGCCACTCCCAAAATGCAGTAGTGTGGGCTCAGGATTAAGCCACTaGAGCTATCTATGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: NCFHFQTHLPLPKCSSVGSGLSH*SYLCEN
Trigger: ATTTTCACATAGATAGCTCAAGTGGCTTAATCCTGA...GCCCACACTACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATGGAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGTCTGCATCAGAGGCTaGTACACAGGTTACAAAATG +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLVCIRG*YTGYKM
Trigger: CATTTTGTAACCTGTGTACAAGCCTCTGATGCAGAC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGTCTGCATCAGAGGCTaGTACACAGGTTACAAAATG +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIVCIRG*YTGYKM
Trigger: CATTTTGTAACCTGTGTACAAGCCTCTGATGCAGAC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGAACATGAATTACCTTaGTTCCTGCAGCCACGTTCT +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIEHELP*FLQPRS
Trigger: AGAACGTGGCTGCAGGAACAAAGGTAATTCATGTTC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACCCCCATCTACTGCTTaGACAAAGAACGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPPPSTA*TKNEST
Trigger: AGTGCTTTCGTTCTTTGTCAAAGCAGTAGATGGGGG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAACGAATATGCCCCCTTaGTTATTTTCTGGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPTNMPP*LFSGRS
Trigger: GGAACGGCCAGAAAATAACAAAGGGGGCATATTCGT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAGTGTTGCTGTCAATATaGAATGCTTCCATTACCTTT +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRVLLSI*NASITF
Trigger: AAAGGTAATGGAAGCATTCAATATTGACAGCAACAC...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAATATGGTAGCTCACTaGGCGATTAACGTCGGATGT +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGNMVAH*AINVGC
Trigger: ACATCCGACGTTAATCGCCAAGTGAGCTACCATATT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGATCTTAAATTTCCCTaGTTCGTTCCCAGACCGGAT +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLDLKFP*FVPRPD
Trigger: ATCCGGTCTGGGAACGAACAAGGGAAATTTAAGATC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTTAACATCTGTGAGGTaGATGTTGACAGTGGCCACA +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDILTSVR*MLTVAT
Trigger: TGTGGCCACTGTCAACATCAACCTCACAGATGTTAA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTTGCAGTTGATGACATaGCAGGAATGCCACTGTCTA +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRLQLMT*QECHCL
Trigger: TAGACAGTGGCATTCCTGCAATGTCATCAACTGCAA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCTCAGAAATATCAATGTaGACAGTTGCAGTTGATGAC +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSSEISM*TVAVDD
Trigger: GTCATCAACTGCAACTGTCAACATTGATATTTCTGA...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAGACGCAGAGCTAGTTaGAAATCCTCTTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRRRRAS*KSSSLL
Trigger: TAGCAAAGAAGAGGATTTCAAACTAGCTCTGCGTCT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGATACATTATAATCCCATaGCTTTGCAGTGTTCGAAGA +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRYIIIP*LCSVRR
Trigger: TCTTCGAACACTGCAAAGCAATGGGATTATAATGTA...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAAAGCCCAGCTTTACAATaGCAGATGAAAGTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSPALQ*QMKVFP
Trigger: AGGAAACACTTTCATCTGCAATTGTAAAGCTGGGCT...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTGGAATCAAGCTTGCTaGTTGGGACAGTATGACTTG +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIWNQAC*LGQYDL
Trigger: CAAGTCATACTGTCCCAACAAGCAAGCTTGATTCCA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATGGAATCAAGCTTGCTaGTTGGGACAGTATGACTTG +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLWNQAC*LGQYDL
Trigger: CAAGTCATACTGTCCCAACAAGCAAGCTTGATTCCA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCAGTGCAAGCACATATTaGTACATAGGCCCAGACACA +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDISASTY*YIGPDT
Trigger: TGTGTCTGGGCCTATGTACAAATATGTGCTTGCACT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TACTCCTTGTTAAGCGAATTAACTTCCTCTGTGGGCTTGGGCAAGTCTCTTTCCGTTTTGAGGACTGGATaGTTATATTTCCAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: YSLLSELTSSVGLGKSLSVLRTG*LYFQWN
Trigger: ATTCCACTGGAAATATAACAATCCAGTCCTCAAAAC...GGAAAGAGACTTGCCCAAGCCCACAGAGGAAGTTAATTCGCTTAACAAGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACAGAATAATGTGCAGTaGAACACTGTGGGACACAAA +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQQNNVQ*NTVGHK
Trigger: TTTGTGTCCCACAGTGTTCAACTGCACATTATTCTG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCAGAATAATGTGCAGTaGAACACTGTGGGACACAAA +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRQNNVQ*NTVGHK
Trigger: TTTGTGTCCCACAGTGTTCAACTGCACATTATTCTG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCCAGAAATTCAGTTATTTGTTaGCCAGAAGGGTACTACAGT +
Preference number: 5 (lower is better)
Translates to: FLKSSLTECKHIFVHRPRNSVIC*PEGYYS
Trigger: ACTGTAGTACCCTTCTGGCAAACAAATAACTGAATT...TCTGGGCCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAACATTTCCAAACACATTaGCCACTCCCAAAATGCAGT +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQHFQTH*PLPKCS
Trigger: ACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATG...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGATACAAACCAGCCTGTTaGCAACAGGCAAACGTACAA +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGYKPAC*QQANVQ
Trigger: TTGTACGTTTGCCTGTTGCAAACAGGCTGGTTTGTA...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp ATTATGCAGGGATTTGCTCTGGTGTACATTATAATCCCATTGCTTTaGAGTGTTCGAAGACGCAGAGCTAGTTTGAAATCCTCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: IMQGFALVYIIIPLL*SVRRRRASLKSSSL
Trigger: CAAAGAAGAGGATTTCAAACTAGCTCTGCGTCTTCGAACACTGCAAAGCAATGGGATTATAATGTACACCAGAGCAAATCCCTGCATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 90 bp CTCTTTTTCCAACGAGAAAGGAACATGAGTGACTACATGGATTGTTaGGGCATGTTCATTTATGCGCTCAATGTGAACATAAAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: LFFQRERNMSDYMDC*GMFIYALNVNIKLC
Trigger: GCAAAGCTTTATGTTCACATTGAGCGCATAAATGAACATGCCCCAACAATCCATGTAGTCACTCATGTTCCTTTCTCGTTGGAAAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 90 bp GTTTGTCACCTCCAGTTTATAAACCTCCTTCTTAACAGTATTCAGTaGCCGTGCTGTAACAATCAGACCCGACCGAGGATTAATTTTAAA +
Preference number: 5 (lower is better)
Translates to: VCHLQFINLLLNSIQ*PCCNNQTRPRINFK
Trigger: TTTAAAATTAATCCTCGGTCGGGTCTGATTGTTACAGCACGGCCACTGAATACTGTTAAGAAGGAGGTTTATAAACTGGAGGTGACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCGACACTATTCTGTATTaGATATCCCAGGATAGATCT +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIDTILY*ISQDRS
Trigger: AGATCTATCCTGGGATATCAAATACAGAATAGTGTC...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATCAAAGAGAGGGCTGTaGTCGTTGACATTTCCTATT +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLSKRGL*SLTFPI
Trigger: AATAGGAAATGTCAACGACAACAGCCCTCTCTTTGA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAGTCTCTGGCTTCCACTaGAATGATTTCAGTACCAAT +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGVSGFH*NDFSTN
Trigger: ATTGGTACTGAAATCATTCAAGTGGAAGCCAGAGAC...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAATTCCAGTTGAGCTATaGATGGCAAACTGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGIPVEL*MANCCV
Trigger: TACACAGCAGTTTGCCATCAATAGCTCAACTGGAAT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGATTCCAGTTGAGCTATaGATGGCAAACTGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRIPVEL*MANCCV
Trigger: TACACAGCAGTTTGCCATCAATAGCTCAACTGGAAT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAGCGGATGGCACCACTaGCTTTATCTATTTCAAATC +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGSGWHH*LYLFQI
Trigger: GATTTGAAATAGATAAAGCAAGTGGTGCCATCCGCT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGATATTGACTGTAGCATaGGAAGCCATTCCTGCCATA +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRILTVA*EAIPAI
Trigger: TATGGCAGGAATGGCTTCCAATGCTACAGTCAATAT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAGTTTCATGGTCCAGGTaGGCAATTGTTCTGATTGCA +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPVSWSR*AIVLIA
Trigger: TGCAATCAGAACAATTGCCAACCTGGACCATGAAAC...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATTGGTTATGTTAGTGTaGTTCTCTGAGATTGAGGTG +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLVMLV*FSEIEV
Trigger: CACCTCAATCTCAGAGAACAACACTAACATAACCAA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCGATTTCCAACTGCATaGACAATAGCAACTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRRFPTA*TIATLV
Trigger: AACCAAAGTTGCTATTGTCAATGCAGTTGGAAATCG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAGGTCACTTCTCCATTaGGACCTTTATCTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRRSLLH*DLYLCQ
Trigger: TTGACAAAGATAAAGGTCCAAATGGAGAAGTGACCT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAATGAGGAATCGATCCTaGGCAAAGTCATTGATGATG +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGMRNRS*AKSLMM
Trigger: CATCATCAATGACTTTGCCAAGGATCGATTCCTCAT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGAAATACCCCCTGTCTaGGGGTTGATCTTAAATTTC +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIREIPPV*GLILNF
Trigger: GAAATTTAAGATCAACCCCAAGACAGGGGGTATTTC...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATTAACATCTGTGAGGTaGATGTTGACAGTGGCCACA +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPLTSVR*MLTVAT
Trigger: TGTGGCCACTGTCAACATCAACCTCACAGATGTTAA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATCTACAGTAAATTCATaGTCCCGATCTCCATTCACA +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSTVNS*SRSPFT
Trigger: TGTGAATGGAGATCGGGACAATGAATTTACTGTAGA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCGTAAACACCGGGCTGTaGTCATTCACATCAGAAATA +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIVNTGL*SFTSEI
Trigger: TATTTCTGATGTGAATGACAACAGCCCGGTGTTTAC...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAGACGCAGAGCTAGTTaGAAATCCTCTTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLRRRAS*KSSSLL
Trigger: TAGCAAAGAAGAGGATTTCAAACTAGCTCTGCGTCT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCAGACGCAGAGCTAGTTaGAAATCCTCTTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIRRRAS*KSSSLL
Trigger: TAGCAAAGAAGAGGATTTCAAACTAGCTCTGCGTCT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CATTCTCCCTCAAAGAGATGCTGTGTAAGCAGTAGGGACTCATCAGCATTAATCTACATTATAATCCCATaGCTTTGCAGTGTTCGAAGA +
Preference number: 5 (lower is better)
Translates to: HSPSKRCCVSSRDSSALIYIIIP*LCSVRR
Trigger: TCTTCGAACACTGCAAAGCAATGGGATTATAATGTA...GATTAATGCTGATGAGTCCCTACTGCTTACACAGCATCTCTTTGAGGGAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGCCAAAAAGCCTCATGTaGCTCTTCATTGATACCTTT +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRPKSLM*LFIDTF
Trigger: AAAGGTATCAATGAAGAGCAACATGAGGCTTTTTGG...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAACTGTGGACACAGATTaGCTCATTAAGCAGATAGTG +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLTVDTD*LIKQIV
Trigger: CACTATCTGCTTAATGAGCAAATCTGTGTCCACAGT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGACAGAATAATGTGCAGTaGAACACTGTGGGACACAAA +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGQNNVQ*NTVGHK
Trigger: TTTGTGTCCCACAGTGTTCAACTGCACATTATTCTG...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGCATTTCCAAACACATTaGCCACTCCCAAAATGCAGT +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRHFQTH*PLPKCS
Trigger: ACTGCATTTTGGGAGTGGCAAATGTGTTTGGAAATG...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCATACAAACCAGCCTGTTaGCAACAGGCAAACGTACAA +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPYKPAC*QQANVQ
Trigger: TTGTACGTTTGCCTGTTGCAAACAGGCTGGTTTGTA...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCAAGTTACCTCAAAAGTTaGCAGACCAACAGCGTGGAT +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPSYLKS*QTNSVD
Trigger: ATCCACGCTGTTGGTCTGCAAACTTTTGAGGTAACT...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 90 bp TTTGGTGCCAACAGGCATCCCTTCCATTATAATGGTGTCATAGCTTaGAGTTTCAAAGACTGGCTTGTTGTCATTCAAATCCAATACCTT +
Preference number: 5 (lower is better)
Translates to: FGANRHPFHYNGVIA*SFKDWLVVIQIQYL
Trigger: AAGGTATTGGATTTGAATGACAACAAGCCAGTCTTTGAAACTTCAAGCTATGACACCATTATAATGGAAGGGATGCCTGTTGGCACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTATATGTCAGTTTTTCATaGGAACTGGAGTCAGGATCT +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLYVSFS*ELESGS
Trigger: AGATCCTGACTCCAGTTCCAATGAAAAACTGACATA...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTTGGTTATGTTAGTGTaGTTCTCTGAGATTGAGGTG +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDILVMLV*FSEIEV
Trigger: CACCTCAATCTCAGAGAACAACACTAACATAACCAA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCAGGTCACTTCTCCATTaGGACCTTTATCTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDIRSLLH*DLYLCQ
Trigger: TTGACAAAGATAAAGGTCCAAATGGAGAAGTGACCT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATTAAAAACTGGAGGGTaGTCATTTACATCAGAGATG +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQLKTGG*SFTSEM
Trigger: CATCTCTGATGTAAATGACAACCCTCCAGTTTTTAA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCTCTACAGTAAATTCATaGTCCCGATCTCCATTCACA +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDISTVNS*SRSPFT
Trigger: TGTGAATGGAGATCGGGACAATGAATTTACTGTAGA...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTGTTTGCCAGAAGGGTACTACAGTACATACTAATTGGTCCAAACACGCTCCAATCAGAAATATCAATGTaGACAGTTGCAGTTGATGAC +
Preference number: 5 (lower is better)
Translates to: LFARRVLQYILIGPNTLQSEISM*TVAVDD
Trigger: GTCATCAACTGCAACTGTCAACATTGATATTTCTGA...TTGGAGCGTGTTTGGACCAATTAGTATGTACTGTAGTACCCTTCTGGCAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTCAAGAGCAGCCTTACTGAGTGCAAGCACATATTTGTACATAGGAAAATACCAAAGACTTaGTTCTCGAAAGCAGCCTTA +
Preference number: 5 (lower is better)
Translates to: LAFLKSSLTECKHIFVHRKIPKT*FSKAAL
Trigger: TAAGGCTGCTTTCGAGAACAAAGTCTTTGGTATTTT...CCTATGTACAAATATGTGCTTGCACTCAGTAAGGCTGCTCTTGAGGAAAGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 90 bp CTGTTTCTCATAATCAAGCTCTTTGCTCAAGCGGATGGCACCACTTaGTTTATCTATTTCAAATCTCCCATTATAGTCATTGACCAAAGA +
Preference number: 5 (lower is better)
Translates to: LFLIIKLFAQADGTT*FIYFKSPIIVIDQR
Trigger: TCTTTGGTCAATGACTATAATGGGAGATTTGAAATAGATAAAGCAAGTGGTGCCATCCGCTTGAGCAAAGAGCTTGATTATGAGAAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGTTAAAAACTGGAGGGTaGTCATTTACATCAGAGATG +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRLKTGG*SFTSEM
Trigger: CATCTCTGATGTAAATGACAACCCTCCAGTTTTTAA...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS-3UTR CAA 90 bp AATGTGTGCAATACTAGTAAAGTGCCTACAACAGATTATGGGAAATGGCTTCCACCAAAAAGCCTCATGTaGCTCTTCATTGATACCTTT +
Preference number: 5 (lower is better)
Translates to: NVCNTSKVPTTDYGKWLPPKSLM*LFIDTF
Trigger: AAAGGTATCAATGAAGAGCAACATGAGGCTTTTTGG...TGGAAGCCATTTCCCATAATCTGTTGTAGGCACTTTACTAGTATTGCACACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAGTTTTGAGGACTGGATaGTTATATTTCCAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLVLRTG*LYFQWN
Trigger: ATTCCACTGGAAATATAACAATCCAGTCCTCAAAAC...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp ACTAGGGACAGTACAATTTACACACCAATGCCATATGTCATCAGAAACTGTGGAAAAATACCAAAGACTTaGTTCTCGAAAGCAGCCTTA +
Preference number: 5 (lower is better)
Translates to: TRDSTIYTPMPYVIRNCGKIPKT*FSKAAL
Trigger: TAAGGCTGCTTTCGAGAACAAAGTCTTTGGTATTTT...TCCACAGTTTCTGATGACATATGGCATTGGTGTGTAAATTGTACTGTCCCTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CAAGTTCTTGCTTACTATATGACGAGCACCAAGAGTCTAGCTATTCTCAACCTAAAAATACCAAAGACTTaGTTCTCGAAAGCAGCCTTA +
Preference number: 5 (lower is better)
Translates to: QVLAYYMTSTKSLAILNLKIPKT*FSKAAL
Trigger: TAAGGCTGCTTTCGAGAACAAAGTCTTTGGTATTTT...TAGGTTGAGAATAGCTAGACTCTTGGTGCTCGTCATATAGTAAGCAAGAACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp TACATGCTTGCCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGAATTCAGTTATTTGTTaGCCAGAAGGGTACTACAGT +
Preference number: 5 (lower is better)
Translates to: YMLAWYIFSCRAILQKIRNSVIC*PEGYYS
Trigger: ACTGTAGTACCCTTCTGGCAAACAAATAACTGAATT...CCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGGCAAGCATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS-3UTR CAA 90 bp CCTGGTATATATTTAGCTGCAGAGCTATTCTGCAGAAAATCAGGGGATGATATCAATTCAGTTATTTGTTaGCCAGAAGGGTACTACAGT +
Preference number: 5 (lower is better)
Translates to: PGIYLAAELFCRKSGDDINSVIC*PEGYYS
Trigger: ACTGTAGTACCCTTCTGGCAAACAAATAACTGAATT...GATATCATCCCCTGATTTTCTGCAGAATAGCTCTGCAGCTAAATATATACCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 90 bp TATAGAACTGCTGTTTCTCATAATCAAGCTCTTTGCTCAAGCGGATaGCACCACTTGCTTTATCTATTTCAAATCTCCCATTATAGTCAT +
Preference number: 5 (lower is better)
Translates to: YRTAVSHNQALCSSG*HHLLYLFQISHYSH
Trigger: ATGACTATAATGGGAGATTTGAAATAGATAAAGCAAGTGGTGCCATCCGCTTGAGCAAAGAGCTTGATTATGAGAAACAGCAGTTCTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 90 bp CTGTCAGGATTAAGCCACTTGAGCTATCTATGTGAAAATAATCTGTaGTATTGTAGGTATCCTGGACAATCTGATAATGTACCATTTTAT +
Preference number: 5 (lower is better)
Translates to: LSGLSHLSYLCENNL*YCRYPGQSDNVPFY
Trigger: ATAAAATGGTACATTATCAGATTGTCCAGGATACCTACAATAGCACAGATTATTTTCACATAGATAGCTCAAGTGGCTTAATCCTGACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp CTGCCGCCGCAGCGCCCACCGCGCGCTAGCCGGGACTaGGGCCGCGAGCAGAAGCGCTCTGCGCTCGGGACG +
Preference number: 6 (lower is better)
Translates to: LPPQRPPRASRD*GREQKRSALGT
Trigger: CGTCCCGAGCGCAGAGCGCTTCTGCTCGCGGCCTCAGTCCCGGCTAGCGCGCGGTGGGCGCTGCGGCGGCAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS GCA 72 bp CTACGAGGCGCCTCCCCCGTGGTCTTCTTCACCCGGTaGTCGGCGCTCTTGCTCCGGGCGAGCCGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: LRGASPVVFFTR*SALLLRASRSP
Trigger: GGGGGACCGGCTCGCCCGGAGCAAGAGCGCCGAGCACCGGGTGAAGAAGACCACGGGGGAGGCGCCTCGTAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS CCA 72 bp GCTGGCGATCCACGGCTCTACGAGGCGCCTCCCCCGTaGTCTTCTTCACCCGGTGCTCGGCGCTCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: AGDPRLYEAPPP*SSSPGARRSCS
Trigger: GGAGCAAGAGCGCCGAGCACCGGGTGAAGAAGACCACGGGGGAGGCGCCTCGTAGAGCCGTGGATCGCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525166.6
CDS CAA 90 bp TTGCGGCCGTCCCCACTGCCGCGCAGGTTCCGGAACGGGATGCCATaGCTCTTGTTAAGCAGGGCGGCGGTGGCCGGGTCCTGCACTAGC +
Preference number: 6 (lower is better)
Translates to: LRPSPLPRRFRNGMP*LLLSRAAVAGSCTS
Trigger: GCTAGTGCAGGACCCGGCCACCGCCGCCCTGCTTAACAAGAGCAATGGCATCCCGTTCCGGAACCTGCGCGGCAGTGGGGACGGCCGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 72 bp CCCCGCCGGGCTGTCAGGATGCGGGGCGACTCAGGGTaGAACGTGGTCATTTCCTGGTGCTCGCCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: PRRAVRMRGDSG*NVVISWCSPPS
Trigger: GCTGGGAGGCGAGCACCAGGAAATGACCACGTTTCACCCTGAGTCGCCCCGCATCCTGACAGCCCGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp GGCGCAGCCCGCAGTACTGGCCCACGTAGCCCGGCGTaGAGTTGCAGAGGAAGGAGCCGAACACGTTCACGC +
Preference number: 6 (lower is better)
Translates to: GAARSTGPRSPA*SCRGRSRTRSR
Trigger: GCGTGAACGTGTTCGGCTCCTTCCTCTGCAACTGCACGCCGGGCTACGTGGGCCAGTACTGCGGGCTGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp GCCCCACCTCCTGGTAGACGTTGCGGCCGTCCCCACTaGCGCGCAGGTTCCGGAACGGGATGCCATTGCTCT +
Preference number: 6 (lower is better)
Translates to: APPPGRRCGRPH*RAGSGTGCHCS
Trigger: AGAGCAATGGCATCCCGTTCCGGAACCTGCGCGGCAGTGGGGACGGCCGCAACGTCTACCAGGAGGTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 72 bp TCCCCACTGCCGCGCAGGTTCCGGAACGGGATGCCATaGCTCTTGTTAAGCAGGGCGGCGGTGGCCGGGTCC +
Preference number: 6 (lower is better)
Translates to: SPLPRRFRNGMP*LLLSRAAVAGS
Trigger: GGACCCGGCCACCGCCGCCCTGCTTAACAAGAGCAATGGCATCCCGTTCCGGAACCTGCGCGGCAGTGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 90 bp CCGTCCCCACTGCCGCGCAGGTTCCGGAACGGGATGCCATTGCTCTaGTTAAGCAGGGCGGCGGTGGCCGGGTCCTGCACTAGCGTGATG +
Preference number: 6 (lower is better)
Translates to: PSPLPRRFRNGMPLL*LSRAAVAGSCTSVM
Trigger: CATCACGCTAGTGCAGGACCCGGCCACCGCCGCCCTGCTTAACAAGAGCAATGGCATCCCGTTCCGGAACCTGCGCGGCAGTGGGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 72 bp ATTCTTCCGGATGGAGTCGCAGTCGGAGCGGCAGGGTaGCACGGCGGGGAGGTTGGGGGCCACACTGCACAC +
Preference number: 6 (lower is better)
Translates to: ILPDGVAVGAAG*HGGEVGGHTAH
Trigger: GTGTGCAGTGTGGCCCCCAACCTCCCCGCCGTGTCACCCTGCCGCTCCGACTGCGACTCCATCCGGAAGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409404.6
ENST00000489716.1
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp GCCCGCAGTACTGGCCCACGTAGCCCGGCGTGCAGTTaGAGAGGAAGGAGCCGAACACGTTCACGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: ARSTGPRSPACS*RGRSRTRSRRS
Trigger: GCTCCTGCGTGAACGTGTTCGGCTCCTTCCTCTGCAACTGCACGCCGGGCTACGTGGGCCAGTACTGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 72 bp CTGCCGCGCAGGTTCCGGAACGGGATGCCATTGCTCTaGTTAAGCAGGGCGGCGGTGGCCGGGTCCTGCACT +
Preference number: 6 (lower is better)
Translates to: LPRRFRNGMPLL*LSRAAVAGSCT
Trigger: AGTGCAGGACCCGGCCACCGCCGCCCTGCTTAACAAGAGCAATGGCATCCCGTTCCGGAACCTGCGCGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp GCCACGGGCTGGATGCTGATGATGCGCAGGCTGTCCTaGTTCTGGGTGAGGACTGCATTCCGCAGGGTGCGC +
Preference number: 6 (lower is better)
Translates to: ATGWMLMMRRLS*FWVRTAFRRVR
Trigger: GCGCACCCTGCGGAATGCAGTCCTCACCCAGAAGCAGGACAGCCTGCGCATCATCAGCATCCAGCCCGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp CAGCACGGCCCGAGATGCCCAAGATTCCAGGGCCGCTaGCGCAGTCCAGCTGGAACCACAGCTTGCCATCCA +
Preference number: 6 (lower is better)
Translates to: QHGPRCPRFQGR*RSPAGTTACHP
Trigger: TGGATGGCAAGCTGTGGTTCCAGCTGGACTGCGGCAGCGGCCCTGGAATCTTGGGCATCTCGGGCCGTGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp CTTGCACCAGGGCGCCGAAGTAGATGCTACTCTCAGTaGTCAGCGTCTGGAAGTAGAGGGGCGCCCGGCGCC +
Preference number: 6 (lower is better)
Translates to: LAPGRRSRCYSQ*SASGSRGAPGA
Trigger: GGCGCCGGGCGCCCCTCTACTTCCAGACGCTGAGCACTGAGAGTAGCATCTACTTCGGCGCCCTGGTGCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp ACCGAGTCCAGGCAGCCCTGGAAGCCGCTGAGCACCTaGGTGACCCGCGTGTCAGTCAGGCTGCGGATGTTA +
Preference number: 6 (lower is better)
Translates to: TESRQPWKPLST*VTRVSVRLRML
Trigger: TAACATCCGCAGCCTGACTGACACGCGGGTCACGCAGGTGCTCAGCGGCTTCCAGGGCTGCCTGGACTCGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp CACTGCACACGACCACGCCCCGCCGGGCTGTCAGGATaGGGGGCGACTCAGGGTGAAACGTGGTCATTTCCT +
Preference number: 6 (lower is better)
Translates to: HCTRPRPAGLSG*GATQGETWSFP
Trigger: AGGAAATGACCACGTTTCACCCTGAGTCGCCCCGCATCCTGACAGCCCGGCGGGGCGTGGTCGTGTGCAGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 72 bp TGGACTGGCAGAACCTGCCACCCCCGTCAGTGGCCTTaGCCATCAGGCTGTACACGGGGATCCTCTCCCGGT +
Preference number: 6 (lower is better)
Translates to: WTGRTCHPRQWP*PSGCTRGSSPG
Trigger: ACCGGGAGAGGATCCCCGTGTACAGCCTGATGGCCAAGGCCACTGACGGGGGTGGCAGGTTCTGCCAGTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp TGTTCTCAGTTCCCGCGTCCCAGCCATTCTTCCGGATaGAGTCGCAGTCGGAGCGGCAGGGTGACACGGCGG +
Preference number: 6 (lower is better)
Translates to: CSQFPRPSHSSG*SRSRSGRVTRR
Trigger: CCGCCGTGTCACCCTGCCGCTCCGACTGCGACTCCATCCGGAAGAATGGCTGGGACGCGGGAACTGAGAACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409404.6
ENST00000489716.1
ENST00000525166.6
ENST00000533797.1
CDS CAA 72 bp TTGGACTGGCAGAACCTGCCACCCCCGTCAGTGGCCTaGGCCATCAGGCTGTACACGGGGATCCTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LDWQNLPPPSVA*AIRLYTGILSR
Trigger: CCGGGAGAGGATCCCCGTGTACAGCCTGATGGCCAAGGCCACTGACGGGGGTGGCAGGTTCTGCCAGTCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp GTGAGGACTGCATTCCGCAGGGTGCGCCGGAACCCATaGATGTGCAGCCCCACGAAGTCCTCAGGGGACACA +
Preference number: 6 (lower is better)
Translates to: VRTAFRRVRRNP*MCSPTKSSGDT
Trigger: TGTGTCCCCTGAGGACTTCGTGGGGCTGCACATGCATGGGTTCCGGCGCACCCTGCGGAATGCAGTCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp GTCCCAGGTGCTGAGGACGGCTACCACCTCGCCCGGTaGGTCGCTCTCCTTCACATTCCCTCGGTACACTTC +
Preference number: 6 (lower is better)
Translates to: VPGAEDGYHLAR*VALLHIPSVHF
Trigger: GAAGTGTACCGAGGGAATGTGAAGGAGAGCGACCCACCGGGCGAGGTGGTAGCCGTCCTCAGCACCTGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp GGCTGGATGCTGATGATGCGCAGGCTGTCCTGCTTCTaGGTGAGGACTGCATTCCGCAGGGTGCGCCGGAAC +
Preference number: 6 (lower is better)
Translates to: GWMLMMRRLSCF*VRTAFRRVRRN
Trigger: GTTCCGGCGCACCCTGCGGAATGCAGTCCTCACCCAGAAGCAGGACAGCCTGCGCATCATCAGCATCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 90 bp AAATTGCGGTTGAGCTCCAGGAAGACCGAGTGCCAGCTCCCGTCGTaGACAGCACGGCCCGAGATGCCCAAGATTCCAGGGCCGCTGCCG +
Preference number: 6 (lower is better)
Translates to: KLRLSSRKTECQLPS*TARPEMPKIPGPLP
Trigger: CGGCAGCGGCCCTGGAATCTTGGGCATCTCGGGCCGTGCTGTCAACGACGGGAGCTGGCACTCGGTCTTCCTGGAGCTCAACCGCAATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp GATGATGCGCAGGCTGTCCTGCTTCTGGGTGAGGACTaGATTCCGCAGGGTGCGCCGGAACCCATGCATGTG +
Preference number: 6 (lower is better)
Translates to: DDAQAVLLLGED*IPQGAPEPMHV
Trigger: CACATGCATGGGTTCCGGCGCACCCTGCGGAATGCAGTCCTCACCCAGAAGCAGGACAGCCTGCGCATCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 72 bp GGATGTTGGACTGGCAGAACCTGCCACCCCCGTCAGTaGCCTTGGCCATCAGGCTGTACACGGGGATCCTCT +
Preference number: 6 (lower is better)
Translates to: GCWTGRTCHPRQ*PWPSGCTRGSS
Trigger: AGAGGATCCCCGTGTACAGCCTGATGGCCAAGGCCACTGACGGGGGTGGCAGGTTCTGCCAGTCCAACATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp TTGAGCTCCAGGAAGACCGAGTGCCAGCTCCCGTCGTaGACAGCACGGCCCGAGATGCCCAAGATTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LSSRKTECQLPS*TARPEMPKIPG
Trigger: CCCTGGAATCTTGGGCATCTCGGGCCGTGCTGTCAACGACGGGAGCTGGCACTCGGTCTTCCTGGAGCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 90 bp CACCTGCGTGACCCGCGTGTCAGTCAGGCTGCGGATGTTATCCGCTaGCACCAGGGCGCCGAAGTAGATGCTACTCTCAGTGCTCAGCGT +
Preference number: 6 (lower is better)
Translates to: HLRDPRVSQAADVIR*HQGAEVDATLSAQR
Trigger: ACGCTGAGCACTGAGAGTAGCATCTACTTCGGCGCCCTGGTGCAAGCGGATAACATCCGCAGCCTGACTGACACGCGGGTCACGCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 72 bp GGGACTGTCCAGGACTCTGGTCAGTGGCCCGCACGCTaGTGTTGTACGAAGACTGCTGCTCACGGTCCAGTG +
Preference number: 6 (lower is better)
Translates to: GTVQDSGQWPAR*CCTKTAAHGPV
Trigger: CACTGGACCGTGAGCAGCAGTCTTCGTACAACATCAGCGTGCGGGCCACTGACCAGAGTCCTGGACAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp CTCCACCGCAAACAGCATGTCCAGTTGGTTGGTGCCTaGCACGGGCTGGATGCTGATGATGCGCAGGCTGTC +
Preference number: 6 (lower is better)
Translates to: LHRKQHVQLVGA*HGLDADDAQAV
Trigger: GACAGCCTGCGCATCATCAGCATCCAGCCCGTGGCAGGCACCAACCAACTGGACATGCTGTTTGCGGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp GCTTCAGCTCCGTCAGGCCCACCACCTCCGCGAAGCTaGTGCGCTTGTTCTGCAGCGGCAGCTCATTGTTAT +
Preference number: 6 (lower is better)
Translates to: ASAPSGPPPPRS*CACSAAAAHCY
Trigger: ATAACAATGAGCTGCCGCTGCAGAACAAGCGCAGCAGCTTCGCGGAGGTGGTGGGCCTGACGGAGCTGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp GCTCGCCTCCCAGCCCGTCCACGATCTTATCCAGGTTaGTCCTGGAGTCACTCTGGAAGCAGGGTGTGTAGG +
Preference number: 6 (lower is better)
Translates to: ARLPARPRSYPG*SWSHSGSRVCR
Trigger: CCTACACACCCTGCTTCCAGAGTGACTCCAGGAGCAACCTGGATAAGATCGTGGACGGGCTGGGAGGCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 72 bp TGTCCAGGACTCTGGTCAGTGGCCCGCACGCTGATGTaGTACGAAGACTGCTGCTCACGGTCCAGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: CPGLWSVARTLM*YEDCCSRSSGC
Trigger: GCAGCCACTGGACCGTGAGCAGCAGTCTTCGTACAACATCAGCGTGCGGGCCACTGACCAGAGTCCTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp AACTCGCTGCTGTGCATCTCCACCGCAAACAGCATGTCCAGTTGGTaGGTGCCTGCCACGGGCTGGATGCTGATGATGCGCAGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: NSLLCISTANSMSSW*VPATGWMLMMRRLS
Trigger: GGACAGCCTGCGCATCATCAGCATCCAGCCCGTGGCAGGCACCAACCAACTGGACATGCTGTTTGCGGTGGAGATGCACAGCAGCGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 90 bp ACCACCTCCGCGAAGCTGCTGCGCTTGTTCTGCAGCGGCAGCTCATaGTTATTCAGTATCACCGAGTCCAGGCAGCCCTGGAAGCCGCTG +
Preference number: 6 (lower is better)
Translates to: TTSAKLLRLFCSGSS*LFSITESRQPWKPL
Trigger: CAGCGGCTTCCAGGGCTGCCTGGACTCGGTGATACTGAATAACAATGAGCTGCCGCTGCAGAACAAGCGCAGCAGCTTCGCGGAGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp TGGTCAGTGGCCCGCACGCTGATGTTGTACGAAGACTaGTGCTCACGGTCCAGTGGCTGCTCCAGGATGATG +
Preference number: 6 (lower is better)
Translates to: WSVARTLMLYED*CSRSSGCSRMM
Trigger: CATCATCCTGGAGCAGCCACTGGACCGTGAGCAGCAGTCTTCGTACAACATCAGCGTGCGGGCCACTGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp TCAGCTCCGTCAGGCCCACCACCTCCGCGAAGCTGCTaGGCTTGTTCTGCAGCGGCAGCTCATTGTTATTCA +
Preference number: 6 (lower is better)
Translates to: SAPSGPPPPRSC*ACSAAAAHCYS
Trigger: TGAATAACAATGAGCTGCCGCTGCAGAACAAGCGCAGCAGCTTCGCGGAGGTGGTGGGCCTGACGGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 72 bp AACAGCATGTCCAGTTGGTTGGTGCCTGCCACGGGCTaGATGCTGATGATGCGCAGGCTGTCCTGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: NSMSSWLVPATG*MLMMRRLSCFW
Trigger: CCAGAAGCAGGACAGCCTGCGCATCATCAGCATCCAGCCCGTGGCAGGCACCAACCAACTGGACATGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 72 bp TGTCCCCTGGACACGGCTTCTCCACACAAGGATCGTTaGACCCCGGACACAGTCCTCCATTGCAGGTGCAAC +
Preference number: 6 (lower is better)
Translates to: CPLDTASPHKDR*TPDTVLHCRCN
Trigger: GTTGCACCTGCAATGGAGGACTGTGTCCGGGGTCCAACGATCCTTGTGTGGAGAAGCCGTGTCCAGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 72 bp CTCCCAGCCCGTCCACGATCTTATCCAGGTTGCTCCTaGAGTCACTCTGGAAGCAGGGTGTGTAGGCCATGG +
Preference number: 6 (lower is better)
Translates to: LPARPRSYPGCS*SHSGSRVCRPW
Trigger: CCATGGCCTACACACCCTGCTTCCAGAGTGACTCCAGGAGCAACCTGGATAAGATCGTGGACGGGCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 72 bp CTGTGCATCTCCACCGCAAACAGCATGTCCAGTTGGTaGGTGCCTGCCACGGGCTGGATGCTGATGATGCGC +
Preference number: 6 (lower is better)
Translates to: LCISTANSMSSW*VPATGWMLMMR
Trigger: GCGCATCATCAGCATCCAGCCCGTGGCAGGCACCAACCAACTGGACATGCTGTTTGCGGTGGAGATGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 72 bp GACCCGCGTGTCAGTCAGGCTGCGGATGTTATCCGCTaGCACCAGGGCGCCGAAGTAGATGCTACTCTCAGT +
Preference number: 6 (lower is better)
Translates to: DPRVSQAADVIR*HQGAEVDATLS
Trigger: ACTGAGAGTAGCATCTACTTCGGCGCCCTGGTGCAAGCGGATAACATCCGCAGCCTGACTGACACGCGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 90 bp GTAGAACTCGCTGCTGTGCATCTCCACCGCAAACAGCATGTCCAGTaGGTTGGTGCCTGCCACGGGCTGGATGCTGATGATGCGCAGGCT +
Preference number: 6 (lower is better)
Translates to: VELAAVHLHRKQHVQ*VGACHGLDADDAQA
Trigger: AGCCTGCGCATCATCAGCATCCAGCCCGTGGCAGGCACCAACCAACTGGACATGCTGTTTGCGGTGGAGATGCACAGCAGCGAGTTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 90 bp ACACACTGCATGTCCCCTGGACACGGCTTCTCCACACAAGGATCGTaGGACCCCGGACACAGTCCTCCATTGCAGGTGCAACGCACGTTC +
Preference number: 6 (lower is better)
Translates to: THCMSPGHGFSTQGS*DPGHSPPLQVQRTF
Trigger: GAACGTGCGTTGCACCTGCAATGGAGGACTGTGTCCGGGGTCCAACGATCCTTGTGTGGAGAAGCCGTGTCCAGGGGACATGCAGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 90 bp AGCTTCAGCTCCGTCAGGCCCACCACCTCCGCGAAGCTGCTGCGCTaGTTCTGCAGCGGCAGCTCATTGTTATTCAGTATCACCGAGTCC +
Preference number: 6 (lower is better)
Translates to: SFSSVRPTTSAKLLR*FCSGSSLLFSITES
Trigger: GGACTCGGTGATACTGAATAACAATGAGCTGCCGCTGCAGAACAAGCGCAGCAGCTTCGCGGAGGTGGTGGGCCTGACGGAGCTGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 90 bp AAGCCGCAGTTGGCAGACACATCCGAGGATGAGGTGCCTCTGGAATaGTGCAAGGACAGAGACACGCTGTCTGCTGGGCCTGTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: KPQLADTSEDEVPLE*CKDRDTLSAGPVGS
Trigger: AGAGCCCACAGGCCCAGCAGACAGCGTGTCTCTGTCCTTGCACAATTCCAGAGGCACCTCATCCTCGGATGTGTCTGCCAACTGCGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp AGGCCCACCACCTCCGCGAAGCTGCTGCGCTTGTTCTaGAGCGGCAGCTCATTGTTATTCAGTATCACCGAG +
Preference number: 6 (lower is better)
Translates to: RPTTSAKLLRLF*SGSSLLFSITE
Trigger: CTCGGTGATACTGAATAACAATGAGCTGCCGCTGCAGAACAAGCGCAGCAGCTTCGCGGAGGTGGTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 72 bp ATGTTAACCCTGACCACCACTCTGGCCACACGCAGATaGTCCAGCTCACGGCTGGCTTCTACCACCAGCTCA +
Preference number: 6 (lower is better)
Translates to: MLTLTTTLATRR*SSSRLASTTSS
Trigger: TGAGCTGGTGGTAGAAGCCAGCCGTGAGCTGGACCATCTGCGTGTGGCCAGAGTGGTGGTCAGGGTTAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp GAGGTTGATGTTGACAGTGGCCACAGCGCTGAGAGCTaGGGTGCCCCCATCTTTGGCTTCCACTACCAGGTA +
Preference number: 6 (lower is better)
Translates to: EVDVDSGHSAES*GAPIFGFHYQV
Trigger: TACCTGGTAGTGGAAGCCAAAGATGGGGGCACCCCAGCTCTCAGCGCTGTGGCCACTGTCAACATCAACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp GGCAGGCGGGCCCACCAAATCCGTTTCGTTGGGGAATaGGTGAGGAGGGAGATACTGGCTAGGATGAAACTG +
Preference number: 6 (lower is better)
Translates to: GRRAHQIRFVGE*VRREILARMKL
Trigger: CAGTTTCATCCTAGCCAGTATCTCCCTCCTCACCCATTCCCCAACGAAACGGATTTGGTGGGCCCGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 72 bp GCTGCTGTGCATCTCCACCGCAAACAGCATGTCCAGTaGGTTGGTGCCTGCCACGGGCTGGATGCTGATGAT +
Preference number: 6 (lower is better)
Translates to: AAVHLHRKQHVQ*VGACHGLDADD
Trigger: ATCATCAGCATCCAGCCCGTGGCAGGCACCAACCAACTGGACATGCTGTTTGCGGTGGAGATGCACAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 72 bp ATGTCCCCTGGACACGGCTTCTCCACACAAGGATCGTaGGACCCCGGACACAGTCCTCCATTGCAGGTGCAA +
Preference number: 6 (lower is better)
Translates to: MSPGHGFSTQGS*DPGHSPPLQVQ
Trigger: TTGCACCTGCAATGGAGGACTGTGTCCGGGGTCCAACGATCCTTGTGTGGAGAAGCCGTGTCCAGGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 72 bp GCGAAGCTGCTGCGCTTGTTCTGCAGCGGCAGCTCATaGTTATTCAGTATCACCGAGTCCAGGCAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: AKLLRLFCSGSS*LFSITESRQPW
Trigger: CCAGGGCTGCCTGGACTCGGTGATACTGAATAACAATGAGCTGCCGCTGCAGAACAAGCGCAGCAGCTTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 72 bp GAGTCTCCACAAAGGGAATGTGAAGGCTGGCGAGGCTaGGCTCTCCCACGCTCTCGTAGTCACTCATGGCTA +
Preference number: 6 (lower is better)
Translates to: ESPQRECEGWRG*ALPRSRSHSWL
Trigger: TAGCCATGAGTGACTACGAGAGCGTGGGAGAGCTCAGCCTCGCCAGCCTTCACATTCCCTTTGTGGAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp GGATGTTATCCGCTTGCACCAGGGCGCCGAAGTAGATaGTACTCTCAGTGCTCAGCGTCTGGAAGTAGAGGG +
Preference number: 6 (lower is better)
Translates to: GCYPLAPGRRSR*YSQCSASGSRG
Trigger: CCCTCTACTTCCAGACGCTGAGCACTGAGAGTAGCATCTACTTCGGCGCCCTGGTGCAAGCGGATAACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 72 bp ACAGTAGTGAGAGAGGACAGGGACTGTCCAGGACTCTaGTCAGTGGCCCGCACGCTGATGTTGTACGAAGAC +
Preference number: 6 (lower is better)
Translates to: TVVREDRDCPGL*SVARTLMLYED
Trigger: GTCTTCGTACAACATCAGCGTGCGGGCCACTGACCAGAGTCCTGGACAGTCCCTGTCCTCTCTCACTACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp CCTGCTGGCTTCATAACTGACACACTGCATGTCCCCTaGACACGGCTTCTCCACACAAGGATCGTTGGACCC +
Preference number: 6 (lower is better)
Translates to: PAGFITDTLHVP*TRLLHTRIVGP
Trigger: GGGTCCAACGATCCTTGTGTGGAGAAGCCGTGTCCAGGGGACATGCAGTGTGTCAGTTATGAAGCCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 72 bp CGCAGTTGGCAGACACATCCGAGGATGAGGTGCCTCTaGAATTGTGCAAGGACAGAGACACGCTGTCTGCTG +
Preference number: 6 (lower is better)
Translates to: RSWQTHPRMRCL*NCARTETRCLL
Trigger: CAGCAGACAGCGTGTCTCTGTCCTTGCACAATTCCAGAGGCACCTCATCCTCGGATGTGTCTGCCAACTGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 72 bp GCCACCACAGAGAAGGTGAATGTGGGGTCTGTCTCGTaGTCTAGGTCCTTCAAGGTACTGATCCAGCCCGTG +
Preference number: 6 (lower is better)
Translates to: ATTEKVNVGSVS*SRSFKVLIQPV
Trigger: CACGGGCTGGATCAGTACCTTGAAGGACCTAGATCACGAGACAGACCCCACATTCACCTTCTCTGTGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp GTGTGCTGGAAGACCACAGCCGACCGCAAGATCCCATaGGGGTCCAACACAAACTCCTCCTCTTCATTTCCC +
Preference number: 6 (lower is better)
Translates to: VCWKTTADRKIP*GSNTNSSSSFP
Trigger: GGGAAATGAAGAGGAGGAGTTTGTGTTGGACCCTCATGGGATCTTGCGGTCGGCTGTGGTCTTCCAGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp AGCCGTGCTGTAGGTCATGAGCGCGTGGGAATCGAGTaGCAAGCCTTGCTCACAATGCTGTTCCTGACAGTC +
Preference number: 6 (lower is better)
Translates to: SRAVGHERVGIE*QALLTMLFLTV
Trigger: GACTGTCAGGAACAGCATTGTGAGCAAGGCTTGTCACTCGATTCCCACGCGCTCATGACCTACAGCACGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp TCTGACAGAGACCAAGGCCGTGGAGGAAAGAGAGAATaGCTCTCCAAGGTCAGAGGCCACCACAGAGAAGGT +
Preference number: 6 (lower is better)
Translates to: SDRDQGRGGKRE*LSKVRGHHREG
Trigger: ACCTTCTCTGTGGTGGCCTCTGACCTTGGAGAGGCATTCTCTCTTTCCTCCACGGCCTTGGTCTCTGTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp ATAGGTGAAGGGGGTGGTTTCTTAATCCATTCAATGTaGAGGCGGGCCGTGGAGGATTTCTGTGGGCGCCCA +
Preference number: 6 (lower is better)
Translates to: IGEGGGFLIHSM*RRAVEDFCGRP
Trigger: TGGGCGCCCACAGAAATCCTCCACGGCCCGCCTCCACATTGAATGGATTAAGAAACCACCCCCTTCACCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp GTTGATGACATTGCAGGAATGCCACTGTCTACGGCCTaGACAAGCAGAGAGTATCCAGACACCCGTTCCCGG +
Preference number: 6 (lower is better)
Translates to: VDDIAGMPLSTA*TSREYPDTRSR
Trigger: CCGGGAACGGGTGTCTGGATACTCTCTGCTTGTCCAGGCCGTAGACAGTGGCATTCCTGCAATGTCATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp ATGCCCAAGATTCCAGGGCCGCTGCCGCAGTCCAGCTaGAACCACAGCTTGCCATCCACAATCTTCAGAATT +
Preference number: 6 (lower is better)
Translates to: MPKIPGPLPQSS*NHSLPSTIFRI
Trigger: AATTCTGAAGATTGTGGATGGCAAGCTGTGGTTCCAGCTGGACTGCGGCAGCGGCCCTGGAATCTTGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 72 bp CCAGGGCCGCTGCCGCAGTCCAGCTGGAACCACAGCTaGCCATCCACAATCTTCAGAATTATGCAGGGATTT +
Preference number: 6 (lower is better)
Translates to: PGPLPQSSWNHS*PSTIFRIMQGF
Trigger: AAATCCCTGCATAATTCTGAAGATTGTGGATGGCAAGCTGTGGTTCCAGCTGGACTGCGGCAGCGGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 90 bp TGCACCTGTGCAGTGCTGGTGAACAACCCATCAGAGACAGACACATaGAGACTGTACAGAGGCTCCATCCGCTGCTTCCGATGGTTGGAC +
Preference number: 6 (lower is better)
Translates to: CTCAVLVNNPSETDT*RLYRGSIRCFRWLD
Trigger: GTCCAACCATCGGAAGCAGCGGATGGAGCCTCTGTACAGTCTCAATGTGTCTGTCTCTGATGGGTTGTTCACCAGCACTGCACAGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp ACCTTCCTATTGATGCCAATGTCGGGGTCCACGGCTTaGACTCTGGTCAACAGAGCCTTGGTGGCTGTGTTC +
Preference number: 6 (lower is better)
Translates to: TFLLMPMSGSTA*TLVNRALVAVF
Trigger: GAACACAGCCACCAAGGCTCTGTTGACCAGAGTTCAAGCCGTGGACCCCGACATTGGCATCAATAGGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp ATCGTCAAAGCCGCAGTTGGCAGACACATCCGAGGATaGGGTGCCTCTGGAATTGTGCAAGGACAGAGACAC +
Preference number: 6 (lower is better)
Translates to: IVKAAVGRHIRG*GASGIVQGQRH
Trigger: GTGTCTCTGTCCTTGCACAATTCCAGAGGCACCTCATCCTCGGATGTGTCTGCCAACTGCGGCTTTGACGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp GTGTTCTGCAGCATCTCATGCACCAACTGCTCCACATaGACGACCACATCAATGGGTACCTGGAAGCGACCA +
Preference number: 6 (lower is better)
Translates to: VFCSISCTNCST*TTTSMGTWKRP
Trigger: TGGTCGCTTCCAGGTACCCATTGATGTGGTCGTGCATGTGGAGCAGTTGGTGCATGAGATGCTGCAGAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp CCACTCTGGCCACACGCAGATGGTCCAGCTCACGGCTaGCTTCTACCACCAGCTCATATAACTCTTGTTCTT +
Preference number: 6 (lower is better)
Translates to: PLWPHADGPAHG*LLPPAHITLVL
Trigger: AAGAACAAGAGTTATATGAGCTGGTGGTAGAAGCCAGCCGTGAGCTGGACCATCTGCGTGTGGCCAGAGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp CGGGGTCCACGGCTTGAACTCTGGTCAACAGAGCCTTaGTGGCTGTGTTCTCATAGACACAGGTGTTGTAGT +
Preference number: 6 (lower is better)
Translates to: RGPRLELWSTEP*WLCSHRHRCCS
Trigger: ACTACAACACCTGTGTCTATGAGAACACAGCCACCAAGGCTCTGTTGACCAGAGTTCAAGCCGTGGACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp TCTTCTAGCATTGGACAGCTTCTGGATCAGGTAGGCTaGCTTGTAGAACTCGCTGCTGTGCATCTCCACCGC +
Preference number: 6 (lower is better)
Translates to: SSSIGQLLDQVG*LVELAAVHLHR
Trigger: GCGGTGGAGATGCACAGCAGCGAGTTCTACAAGCCAGCCTACCTGATCCAGAAGCTGTCCAATGCTAGAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 72 bp CACTCATGGCTACTTCGGAATCGTCAAAGCCGCAGTTaGCAGACACATCCGAGGATGAGGTGCCTCTGGAAT +
Preference number: 6 (lower is better)
Translates to: HSWLLRNRQSRS*QTHPRMRCLWN
Trigger: ATTCCAGAGGCACCTCATCCTCGGATGTGTCTGCCAACTGCGGCTTTGACGATTCCGAAGTAGCCATGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 72 bp GACCTTCCTATTGATGCCAATGTCGGGGTCCACGGCTaGAACTCTGGTCAACAGAGCCTTGGTGGCTGTGTT +
Preference number: 6 (lower is better)
Translates to: DLPIDANVGVHG*NSGQQSLGGCV
Trigger: AACACAGCCACCAAGGCTCTGTTGACCAGAGTTCAAGCCGTGGACCCCGACATTGGCATCAATAGGAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp AAGCGACCATCACTCACAGACACATTCAGGACATACTaGCCGCTGTCCAGGCCTCCCAGGGCGATGATTTTC +
Preference number: 6 (lower is better)
Translates to: KRPSLTDTFRTY*PLSRPPRAMIF
Trigger: GAAAATCATCGCCCTGGGAGGCCTGGACAGCGGCAAGTATGTCCTGAATGTGTCTGTGAGTGATGGTCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp TCACTCATGGCTACTTCGGAATCGTCAAAGCCGCAGTaGGCAGACACATCCGAGGATGAGGTGCCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: SLMATSESSKPQ*ADTSEDEVPLE
Trigger: TTCCAGAGGCACCTCATCCTCGGATGTGTCTGCCAACTGCGGCTTTGACGATTCCGAAGTAGCCATGAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS TCA 72 bp GGCCGTTCCCCATTAACTGTGCTGAACCAGACATTCTaGCTGGGCAAAATCCTCAGGGTGTCCACTGTACTC +
Preference number: 6 (lower is better)
Translates to: GRSPLTVLNQTF*LGKILRVSTVL
Trigger: GAGTACAGTGGACACCCTGAGGATTTTGCCCAGTCAGAATGTCTGGTTCAGCACAGTTAATGGGGAACGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp CCATCCCTTCCGGAGTCTTCATCTCGAGCAGTCACCTaGAGCACGCTTGTTCCAATGCGTGAGTTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: PSLPESSSRAVT*STLVPMREFSF
Trigger: AAAGGAAAACTCACGCATTGGAACAAGCGTGCTGCAGGTGACTGCTCGAGATGAAGACTCCGGAAGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000528921.1
CDS GCA 72 bp GCAGGGCTGTACAAGTTAGCCCCAAGTACCCTAATATaGACCTGTGCAGTGCTGGTGAACAACCCATCAGAG +
Preference number: 6 (lower is better)
Translates to: AGLYKLAPSTLI*TCAVLVNNPSE
Trigger: CTCTGATGGGTTGTTCACCAGCACTGCACAGGTGCATATTAGGGTACTTGGGGCTAACTTGTACAGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp ATGGTGACAGTGTTCTGCAGCATCTCATGCACCAACTaGTCCACATGCACGACCACATCAATGGGTACCTGG +
Preference number: 6 (lower is better)
Translates to: MVTVFCSISCTN*STCTTTSMGTW
Trigger: CCAGGTACCCATTGATGTGGTCGTGCATGTGGAGCAGTTGGTGCATGAGATGCTGCAGAACACTGTCACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp GGGGACACATTTTCAAAGCGGATGGTGACAGTGTTCTaGAGCATCTCATGCACCAACTGCTCCACATGCACG +
Preference number: 6 (lower is better)
Translates to: GDTFSKRMVTVF*SISCTNCSTCT
Trigger: CGTGCATGTGGAGCAGTTGGTGCATGAGATGCTGCAGAACACTGTCACCATCCGCTTTGAAAATGTGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp GGTCCACGGCTTGAACTCTGGTCAACAGAGCCTTGGTaGCTGTGTTCTCATAGACACAGGTGTTGTAGTGGT +
Preference number: 6 (lower is better)
Translates to: GPRLELWSTEPW*LCSHRHRCCSG
Trigger: ACCACTACAACACCTGTGTCTATGAGAACACAGCCACCAAGGCTCTGTTGACCAGAGTTCAAGCCGTGGACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp CATGCACCAACTGCTCCACATGCACGACCACATCAATaGGTACCTGGAAGCGACCATCACTCACAGACACAT +
Preference number: 6 (lower is better)
Translates to: HAPTAPHARPHQ*VPGSDHHSQTH
Trigger: ATGTGTCTGTGAGTGATGGTCGCTTCCAGGTACCCATTGATGTGGTCGTGCATGTGGAGCAGTTGGTGCATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp CACCTGATAAATCAGAGTCCCGGGTTCCGCATCCACTaGAACAGCAGCATAGTATGGGAGGCCCACAAAGAC +
Preference number: 6 (lower is better)
Translates to: HLINQSPGFRIH*NSSIVWEAHKD
Trigger: GTCTTTGTGGGCCTCCCATACTATGCTGCTGTTCAAGTGGATGCGGAACCCGGGACTCTGATTTATCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp TTCGGGCTGGGAATCCGAGTGGAGGGAGTAAGTGACTaGTCCATTGGCTCCCCAGTCCATATCAATAGCTCT +
Preference number: 6 (lower is better)
Translates to: FGLGIRVEGVSD*SIGSPVHINSS
Trigger: AGAGCTATTGATATGGACTGGGGAGCCAATGGACAAGTCACTTACTCCCTCCACTCGGATTCCCAGCCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp GTGACAATGAAAATTTCCAGGGGAATGGCTGTGGGCTaGTGGGTGCTTTCCTCAATGACTCGCACGCGGATG +
Preference number: 6 (lower is better)
Translates to: VTMKISRGMAVG*WVLSSMTRTRM
Trigger: CATCCGCGTGCGAGTCATTGAGGAAAGCACCCACAAGCCCACAGCCATTCCCCTGGAAATTTTCATTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp CGAAGTCCTCAGGGGACACATTTTCAAAGCGGATGGTaGCAGTGTTCTGCAGCATCTCATGCACCAACTGCT +
Preference number: 6 (lower is better)
Translates to: RSPQGTHFQSGW*QCSAASHAPTA
Trigger: AGCAGTTGGTGCATGAGATGCTGCAGAACACTGTCACCATCCGCTTTGAAAATGTGTCCCCTGAGGACTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp ATCTGTCACCTCAATGTTGACTTCAACGGGACTCTCTaGAGTCAGTTGGGGGCTACCACTGTCTCTCACATG +
Preference number: 6 (lower is better)
Translates to: ICHLNVDFNGTL*SQLGATTVSHM
Trigger: CATGTGAGAGACAGTGGTAGCCCCCAACTGACTGCAGAGAGTCCCGTTGAAGTCAACATTGAGGTGACAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp TCAAAGCGGATGGTGACAGTGTTCTGCAGCATCTCATaGACCAACTGCTCCACATGCACGACCACATCAATG +
Preference number: 6 (lower is better)
Translates to: SKRMVTVFCSIS*TNCSTCTTTSM
Trigger: CATTGATGTGGTCGTGCATGTGGAGCAGTTGGTGCATGAGATGCTGCAGAACACTGTCACCATCCGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp CAATGGTGGAGTAGAGTGGAACAACGCCCCTGTCTGTaGCATACACTGTTAGCCAGTATGACCCCATTGTCT +
Preference number: 6 (lower is better)
Translates to: QWWSRVEQRPCL*HTLLASMTPLS
Trigger: AGACAATGGGGTCATACTGGCTAACAGTGTATGCCACAGACAGGGGCGTTGTTCCACTCTACTCCACCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000528921.1
CDS CCA 72 bp TTGAGACTGTACAGAGGCTCCATCCGCTGCTTCCGATaGTTGGACAATGTGATAACTCCACTCTTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: LRLYRGSIRCFR*LDNVITPLLLS
Trigger: GGACAGCAAGAGTGGAGTTATCACATTGTCCAACCATCGGAAGCAGCGGATGGAGCCTCTGTACAGTCTCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp AGACTGTACAGAGGCTCCATCCGCTGCTTCCGATGGTaGGACAATGTGATAACTCCACTCTTGCTGTCCATC +
Preference number: 6 (lower is better)
Translates to: RLYRGSIRCFRW*DNVITPLLLSI
Trigger: GATGGACAGCAAGAGTGGAGTTATCACATTGTCCAACCATCGGAAGCAGCGGATGGAGCCTCTGTACAGTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp TCCCGGTCTAGCCTTTCTGTGGTGATGACCTGCCCATaGCTGTCTATGAGGAATCGATCCTTGGCAAAGTCA +
Preference number: 6 (lower is better)
Translates to: SRSSLSVVMTCP*LSMRNRSLAKS
Trigger: TGACTTTGCCAAGGATCGATTCCTCATAGACAGCAATGGGCAGGTCATCACCACAGAAAGGCTAGACCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp TCCTCGAGGGTTTCCTCCTGTAATATGGTAGCTCACTaGGCGATTAACGTCGGATGTGTCTCTGTCCCAGGT +
Preference number: 6 (lower is better)
Translates to: SSRVSSCNMVAH*AINVGCVSVPG
Trigger: ACCTGGGACAGAGACACATCCGACGTTAATCGCCAAGTGAGCTACCATATTACAGGAGGAAACCCTCGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp AATGGCTGTCACCTGATAAATCAGAGTCCCGGGTTCCGCATCCACTaGAACAGCAGCATAGTATGGGAGGCCCACAAAGACTGGAGAATT +
Preference number: 6 (lower is better)
Translates to: NGCHLINQSPGFRIH*NSSIVWEAHKDWRI
Trigger: AATTCTCCAGTCTTTGTGGGCCTCCCATACTATGCTGCTGTTCAAGTGGATGCGGAACCCGGGACTCTGATTTATCAGGTGACAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp GACACATTGAGACTGTACAGAGGCTCCATCCGCTGCTTCCGATGGTaGGACAATGTGATAACTCCACTCTTGCTGTCCATCAGAAAGCTC +
Preference number: 6 (lower is better)
Translates to: DTLRLYRGSIRCFRW*DNVITPLLLSIRKL
Trigger: GAGCTTTCTGATGGACAGCAAGAGTGGAGTTATCACATTGTCCAACCATCGGAAGCAGCGGATGGAGCCTCTGTACAGTCTCAATGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp CATAAGTCCCTGGATCACCATCTGTGGCTCGAACATGAATTACCTTaGTTCCTGCAGCCACGTTCTCTCTCACCTCAGCTACGTATGTGC +
Preference number: 6 (lower is better)
Translates to: HKSLDHHLWLEHELP*FLQPRSLSPQLRMC
Trigger: GCACATACGTAGCTGAGGTGAGAGAGAACGTGGCTGCAGGAACAAAGGTAATTCATGTTCGAGCCACAGATGGTGATCCAGGGACTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp CATTACCTTTTCGGGCTGGGAATCCGAGTGGAGGGAGTAAGTGACTaGTCCATTGGCTCCCCAGTCCATATCAATAGCTCTCACTTGTGT +
Preference number: 6 (lower is better)
Translates to: HYLFGLGIRVEGVSD*SIGSPVHINSSHLC
Trigger: ACACAAGTGAGAGCTATTGATATGGACTGGGGAGCCAATGGACAAGTCACTTACTCCCTCCACTCGGATTCCCAGCCCGAAAAGGTAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp TCTAGGTCCTTCAAGGTACTGATCCAGCCCGTGTTGCTGTCAATATaGAATGCTTCCATTACCTTTTCGGGCTGGGAATCCGAGTGGAGG +
Preference number: 6 (lower is better)
Translates to: SRSFKVLIQPVLLSI*NASITFSGWESEWR
Trigger: CCTCCACTCGGATTCCCAGCCCGAAAAGGTAATGGAAGCATTCAATATTGACAGCAACACGGGCTGGATCAGTACCTTGAAGGACCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp CACGTTCTCTCTCACCTCAGCTACGTATGTGCTTTGTaGAAAGGCAGGGCTGTACAAGTTAGCCCCAAGTAC +
Preference number: 6 (lower is better)
Translates to: HVLSHLSYVCAL*KGRAVQVSPKY
Trigger: GTACTTGGGGCTAACTTGTACAGCCCTGCCTTTTCACAAAGCACATACGTAGCTGAGGTGAGAGAGAACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp CCCGACAAAATAGAGAATGAAAAGGGAGGCCCATTGTaGAAGGAGTCTCTGTCTGTCACCACCAGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: PDKIENEKGGPL*KESLSVTTSCK
Trigger: CTTGCAGCTGGTGGTGACAGACAGAGACTCCTTTCACAATGGGCCTCCCTTTTCATTCTCTATTTTGTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp CCAACTATGTCAAACCACAGAGGGGTGTTAGCTGGCTaGACAGACACCACCCCTACAATTTCAGTCACTCTA +
Preference number: 6 (lower is better)
Translates to: PTMSNHRGVLAG*TDTTPTISVTL
Trigger: TAGAGTGACTGAAATTGTAGGGGTGGTGTCTGTGCAGCCAGCTAACACCCCTCTGTGGTTTGACATAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp AGAATTGTCAGACATGGTGACGGAAATGCGCACAATTaGAGTAGCAGACATTGGCGGGGATCCCTGATCTGT +
Preference number: 6 (lower is better)
Translates to: RIVRHGDGNAHN*SSRHWRGSLIC
Trigger: ACAGATCAGGGATCCCCGCCAATGTCTGCTACTGCAATTGTGCGCATTTCCGTCACCATGTCTGACAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp ACAGACACATTGAGACTGTACAGAGGCTCCATCCGCTaGTTCCGATGGTTGGACAATGTGATAACTCCACTC +
Preference number: 6 (lower is better)
Translates to: TDTLRLYRGSIR*FRWLDNVITPL
Trigger: GAGTGGAGTTATCACATTGTCCAACCATCGGAAGCAGCGGATGGAGCCTCTGTACAGTCTCAATGTGTCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp GGTACTGATCCAGCCCGTGTTGCTGTCAATATTGAATaGTTCCATTACCTTTTCGGGCTGGGAATCCGAGTG +
Preference number: 6 (lower is better)
Translates to: GTDPARVAVNIE*FHYLFGLGIRV
Trigger: CACTCGGATTCCCAGCCCGAAAAGGTAATGGAAGCATTCAATATTGACAGCAACACGGGCTGGATCAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp GCACGCGGATGTAAGTGTGAGAAACTTGCTGGGGTTTaGCTGAATCCTTTGCCTGGACACACAACACGTATT +
Preference number: 6 (lower is better)
Translates to: ARGCKCEKLAGV*LNPLPGHTTRI
Trigger: AATACGTGTTGTGTGTCCAGGCAAAGGATTCAGGCAAACCCCAGCAAGTTTCTCACACTTACATCCGCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp CAGTGTAGCTCAGCTTGTGCTTCTCATCTCTATCTGTaGCTTCAATCTGCAGGATCTCCGTGTCTGGAAGCA +
Preference number: 6 (lower is better)
Translates to: QCSSACASHLYL*LQSAGSPCLEA
Trigger: TGCTTCCAGACACGGAGATCCTGCAGATTGAAGCCACAGATAGAGATGAGAAGCACAAGCTGAGCTACACTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp CCCGGGTTCCGCATCCACTTGAACAGCAGCATAGTATaGGAGGCCCACAAAGACTGGAGAATTGTCATTTAT +
Preference number: 6 (lower is better)
Translates to: PGFRIHLNSSIV*EAHKDWRIVIY
Trigger: ATAAATGACAATTCTCCAGTCTTTGTGGGCCTCCCATACTATGCTGCTGTTCAAGTGGATGCGGAACCCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp TATTGGATCGCAGGATCCTCCATTCCGGCAGGGGTTTaGGAAGCAGGCTGTAATCTCAGATTCACAGTTTCT +
Preference number: 6 (lower is better)
Translates to: YWIAGSSIPAGV*EAGCNLRFTVS
Trigger: AGAAACTGTGAATCTGAGATTACAGCCTGCTTCCCAAACCCCTGCCGGAATGGAGGATCCTGCGATCCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 72 bp CCCAGCTTTACAATTGCAGATGAAAGTGTTTCCTATTaGATCGCAGGATCCTCCATTCCGGCAGGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: PSFTIADESVSY*IAGSSIPAGVW
Trigger: CCAAACCCCTGCCGGAATGGAGGATCCTGCGATCCAATAGGAAACACTTTCATCTGCAATTGTAAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 72 bp CTGGTCCTGACTCAAGAACTCCTCTTCATGAGGGGGTaGGTATTCACTGTCAATGTCATAACCACCCAGGTA +
Preference number: 6 (lower is better)
Translates to: LVLTQELLFMRG*VFTVNVITTQV
Trigger: TACCTGGGTGGTTATGACATTGACAGTGAATACCCACCCCCTCATGAAGAGGAGTTCTTGAGTCAGGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409404.6
ENST00000489716.1
ENST00000525166.6
ENST00000533797.1
CDS CAA 72 bp TGCTTCCGATGGTTGGACAATGTGATAACTCCACTCTaGCTGTCCATCAGAAAGCTCGTCCGGTCATTCCCA +
Preference number: 6 (lower is better)
Translates to: CFRWLDNVITPL*LSIRKLVRSFP
Trigger: TGGGAATGACCGGACGAGCTTTCTGATGGACAGCAAGAGTGGAGTTATCACATTGTCCAACCATCGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp CTGGATCACCATCTGTGGCTCGAACATGAATTACCTTaGTTCCTGCAGCCACGTTCTCTCTCACCTCAGCTA +
Preference number: 6 (lower is better)
Translates to: LDHHLWLEHELP*FLQPRSLSPQL
Trigger: TAGCTGAGGTGAGAGAGAACGTGGCTGCAGGAACAAAGGTAATTCATGTTCGAGCCACAGATGGTGATCCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp AGCATTGGAAGCCATTCCTGCCATATTGGTGGCCTGAATGATGAGTaGATAAGAGGATGTGCGCTCATAATCCAGGGCCTTCTGAGTGGT +
Preference number: 6 (lower is better)
Translates to: SIGSHSCHIGGLNDE*IRGCALIIQGLLSG
Trigger: ACCACTCAGAAGGCCCTGGATTATGAGCGCACATCCTCTTATCAACTCATCATTCAGGCCACCAATATGGCAGGAATGGCTTCCAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp TCCATCCGCTGCTTCCGATGGTTGGACAATGTGATAACTCCACTCTaGCTGTCCATCAGAAAGCTCGTCCGGTCATTCCCAGATAAAATG +
Preference number: 6 (lower is better)
Translates to: SIRCFRWLDNVITPL*LSIRKLVRSFPDKM
Trigger: CATTTTATCTGGGAATGACCGGACGAGCTTTCTGATGGACAGCAAGAGTGGAGTTATCACATTGTCCAACCATCGGAAGCAGCGGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp AGAGGGTTTTCCCGGTCTAGCCTTTCTGTGGTGATGACCTGCCCATaGCTGTCTATGAGGAATCGATCCTTGGCAAAGTCATTGATGATG +
Preference number: 6 (lower is better)
Translates to: RGFSRSSLSVVMTCP*LSMRNRSLAKSLMM
Trigger: CATCATCAATGACTTTGCCAAGGATCGATTCCTCATAGACAGCAATGGGCAGGTCATCACCACAGAAAGGCTAGACCGGGAAAACCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp CTGCCAGCTTTTGAGCCACACGAGTTTCTCTGCAACTaGAGCTCTTTGAAGACACTTTCCCATGTAGGACTG +
Preference number: 6 (lower is better)
Translates to: LPAFEPHEFLCN*SSLKTLSHVGL
Trigger: CAGTCCTACATGGGAAAGTGTCTTCAAAGAGCTTCAGTTGCAGAGAAACTCGTGTGGCTCAAAAGCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp GTCCAAGATCTGGATCATGGGTCTCAAGCCAAGCAATaGCAGTGCCAACAGGGAGATCTTCAAGAACCTTCA +
Preference number: 6 (lower is better)
Translates to: VQDLDHGSQAKQ*QCQQGDLQEPS
Trigger: TGAAGGTTCTTGAAGATCTCCCTGTTGGCACTGTCATTGCTTGGCTTGAGACCCATGATCCAGATCTTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp TCGAGCAGTCACCTGCAGCACGCTTGTTCCAATGCGTaGGTTTTCCTTTACAGATCCAACAACAGCAAAGTC +
Preference number: 6 (lower is better)
Translates to: SSSHLQHACSNA*VFLYRSNNSKV
Trigger: GACTTTGCTGTTGTTGGATCTGTAAAGGAAAACTCACGCATTGGAACAAGCGTGCTGCAGGTGACTGCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000528921.1
CDS TCA 72 bp CTGTCCAGGCCTCCCAGGGCGATGATTTTCCCATCGTaGCTGTTCACTTTAAATAAGCTTTTCTGCTCCGAT +
Preference number: 6 (lower is better)
Translates to: LSRPPRAMIFPS*LFTLNKLFCSD
Trigger: ATCGGAGCAGAAAAGCTTATTTAAAGTGAACAGTCACGATGGGAAAATCATCGCCCTGGGAGGCCTGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp CATCTCGAGCAGTCACCTGCAGCACGCTTGTTCCAATaGGTGAGTTTTCCTTTACAGATCCAACAACAGCAA +
Preference number: 6 (lower is better)
Translates to: HLEQSPAARLFQ*VSFPLQIQQQQ
Trigger: TTGCTGTTGTTGGATCTGTAAAGGAAAACTCACGCATTGGAACAAGCGTGCTGCAGGTGACTGCTCGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000528921.1
CDS CCA 72 bp GACGTGGATATAGACAGGAATGAGGGAGTGCTTTACTaGGATGCCCCCATCTACTGCTTTGACAAAGAACGA +
Preference number: 6 (lower is better)
Translates to: DVDIDRNEGVLY*DAPIYCFDKER
Trigger: TCGTTCTTTGTCAAAGCAGTAGATGGGGGCATCCCAGTAAAGCACTCCCTCATTCCTGTCTATATCCACGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp AGCCATTCCTGCCATATTGGTGGCCTGAATGATGAGTaGATAAGAGGATGTGCGCTCATAATCCAGGGCCTT +
Preference number: 6 (lower is better)
Translates to: SHSCHIGGLNDE*IRGCALIIQGL
Trigger: AAGGCCCTGGATTATGAGCGCACATCCTCTTATCAACTCATCATTCAGGCCACCAATATGGCAGGAATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp AGCTGGTTAAAATTACCCTTTGTGACCATCCAGCCATaGTCAGGATCGATTTCCAGGAGGTCGGCCACTGAA +
Preference number: 6 (lower is better)
Translates to: SWLKLPFVTIQP*SGSISRRSATE
Trigger: TTCAGTGGCCGACCTCCTGGAAATCGATCCTGACAATGGCTGGATGGTCACAAAGGGTAATTTTAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp ACAGTGAAAGAGAAAGCAGAAATTACACTGGTTACCTaGTGCCTATTTCCAGTCCCACCCACCCCTCTCAGC +
Preference number: 6 (lower is better)
Translates to: TVKEKAEITLVT*CLFPVPPTPLS
Trigger: GCTGAGAGGGGTGGGTGGGACTGGAAATAGGCACAAGGTAACCAGTGTAATTTCTGCTTTCTCTTTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469900.1
CDS CAA 72 bp GGTGTCCCAGTGATAGGCTCGGTTGTAGTTCTGTCCTaGGTCCATGACAGACACTTCATTCTCTATAGTGTC +
Preference number: 6 (lower is better)
Translates to: GVPVIGSVVVLS*VHDRHFILYSV
Trigger: GACACTATAGAGAATGAAGTGTCTGTCATGGACCAAGGACAGAACTACAACCGAGCCTATCACTGGGACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469900.1
ENST00000525166.6
CDS CAA 90 bp AAGAGAGGGCTGTTGTCGTTGACATTTCCTATTCGAATAGTCACATaGACCTCACTTTCATGGCGGTATGGTGAACCCCAGTCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: KRGLLSLTFPIRIVT*TSLSWRYGEPQSEA
Trigger: AGCCTCTGACTGGGGTTCACCATACCGCCATGAAAGTGAGGTCAATGTGACTATTCGAATAGGAAATGTCAACGACAACAGCCCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp GCTTGTTGTCATTTTCATCTAGAACCTGAACCACCACCCAAATGGTaGACTGTTTTGGAGAGGGACCACCATCTGTCACAGTCACCTCCA +
Preference number: 6 (lower is better)
Translates to: ACCHFHLEPEPPPKW*TVLERDHHLSQSPP
Trigger: TGGAGGTGACTGTGACAGATGGTGGTCCCTCTCCAAAACAGTCAACCATTTGGGTGGTGGTTCAGGTTCTAGATGAAAATGACAACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp ATGGGAAGCTCCACAGATGTAGACAAAGAAGGTTTTCCGCCATCCTaGGCTAGGATGGTGACTCCATACTCAATGTTGGACAAGTCAGAG +
Preference number: 6 (lower is better)
Translates to: MGSSTDVDKEGFPPS*ARMVTPYSMLDKSE
Trigger: CTCTGACTTGTCCAACATTGAGTATGGAGTCACCATCCTAGCCAAGGATGGCGGAAAACCTTCTTTGTCTACATCTGTGGAGCTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp GTATTTTTCAGCTGGTTAAAATTACCCTTTGTGACCATCCAGCCATaGTCAGGATCGATTTCCAGGAGGTCGGCCACTGAAACAGAGGCC +
Preference number: 6 (lower is better)
Translates to: VFFSWLKLPFVTIQP*SGSISRRSATETEA
Trigger: GGCCTCTGTTTCAGTGGCCGACCTCCTGGAAATCGATCCTGACAATGGCTGGATGGTCACAAAGGGTAATTTTAACCAGCTGAAAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp CTTCAATCTGCAGGATCTCCGTGTCTGGAAGCACATCCTCGGAAATaGTCACATCGTAATTCGGCTGAGAGAATTCTGGGCCATTATCAT +
Preference number: 6 (lower is better)
Translates to: LQSAGSPCLEAHPRK*SHRNSAERILGHYH
Trigger: ATGATAATGGCCCAGAATTCTCTCAGCCGAATTACGATGTGACAATTTCCGAGGATGTGCTTCCAGACACGGAGATCCTGCAGATTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp AGTGACTTGTCCATTGGCTCCCCAGTCCATATCAATAGCTCTCACTaGTGTGAGTTTGGTGCCAACAGGCATCCCTTCCATTATAATGGT +
Preference number: 6 (lower is better)
Translates to: SDLSIGSPVHINSSH*CEFGANRHPFHYNG
Trigger: ACCATTATAATGGAAGGGATGCCTGTTGGCACCAAACTCACACAAGTGAGAGCTATTGATATGGACTGGGGAGCCAATGGACAAGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp CCGGTCCAACTGGTCGGCTACATAAACGATTCCAGTTaGGCTATTGATGGCAAACTGCTGTGTATCTGTCAA +
Preference number: 6 (lower is better)
Translates to: PVQLVGYINDSS*AIDGKLLCICQ
Trigger: TTGACAGATACACAGCAGTTTGCCATCAATAGCTCAACTGGAATCGTTTATGTAGCCGACCAGTTGGACCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp GGGAGTGCTTTACTGGGATGCCCCCATCTACTGCTTTaGCAAAGAACGAAAGCACTGTATTTTTCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: GSALLGCPHLLL*QRTKALYFSAG
Trigger: ACCAGCTGAAAAATACAGTGCTTTCGTTCTTTGTCAAAGCAGTAGATGGGGGCATCCCAGTAAAGCACTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp TTCTGCAATGGTAAAGGAATACTGAGACTGGGTGAATaGTGGCAAGAACGTTTCAGGGGGCAAGACGTGGAT +
Preference number: 6 (lower is better)
Translates to: FCNGKGILRLGE*WQERFRGQDVD
Trigger: ATCCACGTCTTGCCCCCTGAAACGTTCTTGCCATCATTCACCCAGTCTCAGTATTCCTTTACCATTGCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp CCAGGAAGAACTGATCTAAAGGATCCCCAGCCACAATaGAAACAGATTCGATCTCTCCATTCGCTCCATCAT +
Preference number: 6 (lower is better)
Translates to: PGRTDLKDPQPQ*KQIRSLHSLHH
Trigger: ATGATGGAGCGAATGGAGAGATCGAATCTGTTTCCATTGTGGCTGGGGATCCTTTAGATCAGTTCTTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp CTGCCTTGTCCCTGGCTTCTATTTTCAAAGAATAATTaGCTTTGGATTCCCGGTCCAACTGGTCGGCTACAT +
Preference number: 6 (lower is better)
Translates to: LPCPWLLFSKNN*LWIPGPTGRLH
Trigger: ATGTAGCCGACCAGTTGGACCGGGAATCCAAAGCCAATTATTCTTTGAAAATAGAAGCCAGGGACAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp CATTTTCATCTAGAACCTGAACCACCACCCAAATGGTaGACTGTTTTGGAGAGGGACCACCATCTGTCACAG +
Preference number: 6 (lower is better)
Translates to: HFHLEPEPPPKW*TVLERDHHLSQ
Trigger: CTGTGACAGATGGTGGTCCCTCTCCAAAACAGTCAACCATTTGGGTGGTGGTTCAGGTTCTAGATGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp TCCACAGATGTAGACAAAGAAGGTTTTCCGCCATCCTaGGCTAGGATGGTGACTCCATACTCAATGTTGGAC +
Preference number: 6 (lower is better)
Translates to: STDVDKEGFPPS*ARMVTPYSMLD
Trigger: GTCCAACATTGAGTATGGAGTCACCATCCTAGCCAAGGATGGCGGAAAACCTTCTTTGTCTACATCTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp AGGGAGTGCTTTACTGGGATGCCCCCATCTACTGCTTaGACAAAGAACGAAAGCACTGTATTTTTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: RECFTGMPPSTA*TKNESTVFFSW
Trigger: CCAGCTGAAAAATACAGTGCTTTCGTTCTTTGTCAAAGCAGTAGATGGGGGCATCCCAGTAAAGCACTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp AAGTGGAAAGCTGGGCTGGTTTCACGGTCAAGGCGTTaGTCAAGCTTAATAGTGCCTGTTTCCTGTTCTATG +
Preference number: 6 (lower is better)
Translates to: KWKAGLVSRSRR*SSLIVPVSCSM
Trigger: CATAGAACAGGAAACAGGCACTATTAAGCTTGACAAACGCCTTGACCGTGAAACCAGCCCAGCTTTCCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp TTCAAGGTACTGATCCAGCCCGTGTTGCTGTCAATATaGAATGCTTCCATTACCTTTTCGGGCTGGGAATCC +
Preference number: 6 (lower is better)
Translates to: FKVLIQPVLLSI*NASITFSGWES
Trigger: GGATTCCCAGCCCGAAAAGGTAATGGAAGCATTCAATATTGACAGCAACACGGGCTGGATCAGTACCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp GCAAAGCAGGTCACTTCTCCCGGGTCATCAACCCCTTaGTCTTCATGGACAGTGAAAGAGAAAGCAGAAATT +
Preference number: 6 (lower is better)
Translates to: AKQVTSPGSSTP*SSWTVKEKAEI
Trigger: AATTTCTGCTTTCTCTTTCACTGTCCATGAAGACAAAGGGGTTGATGACCCGGGAGAAGTGACCTGCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469900.1
CDS CAA 90 bp TTACTACCTGCAAAGCAGGTCACTTCTCCCGGGTCATCAACCCCTTaGTCTTCATGGACAGTGAAAGAGAAAGCAGAAATTACACTGGTT +
Preference number: 6 (lower is better)
Translates to: LLPAKQVTSPGSSTP*SSWTVKEKAEITLV
Trigger: AACCAGTGTAATTTCTGCTTTCTCTTTCACTGTCCATGAAGACAAAGGGGTTGATGACCCGGGAGAAGTGACCTGCTTTGCAGGTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469900.1
CDS TCA 72 bp TCATTGGAACTGGAGTCAGGATCTTCAGCCTGGATCTaGATGACAGATACGTCCTTTGGAGAGTTTTCCATG +
Preference number: 6 (lower is better)
Translates to: SLELESGSSAWI*MTDTSFGEFSM
Trigger: CATGGAAAACTCTCCAAAGGACGTATCTGTCATTCAGATCCAGGCTGAAGATCCTGACTCCAGTTCCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000528921.1
CDS GCA 72 bp CCATCAGAAAGCTCGTCCGGTCATTCCCAGATAAAATaGTATATTCCAACCGGTCAAAATCAGAGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: PSESSSGHSQIK*YIPTGQNQSCL
Trigger: CAGACAGCTCTGATTTTGACCGGTTGGAATATAGCATTTTATCTGGGAATGACCGGACGAGCTTTCTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp AAACACAATGTCTACTTTGTCCAGGGGTATAGTGGCTaGTACTTTAAAGTGGAAAGCTGGGCTGGTTTCACG +
Preference number: 6 (lower is better)
Translates to: KHNVYFVQGYSG*YFKVESWAGFT
Trigger: CGTGAAACCAGCCCAGCTTTCCACTTTAAAGTAGCAGCCACTATACCCCTGGACAAAGTAGACATTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp CTCCAGTTTATAAACCTCCTTCTTAACAGTATTCAGTaGCCGTGCTGTAACAATCAGACCCGACCGAGGATT +
Preference number: 6 (lower is better)
Translates to: LQFINLLLNSIQ*PCCNNQTRPRI
Trigger: AATCCTCGGTCGGGTCTGATTGTTACAGCACGGCCACTGAATACTGTTAAGAAGGAGGTTTATAAACTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp TTTCCTATTCGAATAGTCACATTGACCTCACTTTCATaGCGGTATGGTGAACCCCAGTCAGAGGCTCTAACA +
Preference number: 6 (lower is better)
Translates to: FPIRIVTLTSLS*RYGEPQSEALT
Trigger: TGTTAGAGCCTCTGACTGGGGTTCACCATACCGCCATGAAAGTGAGGTCAATGTGACTATTCGAATAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp TGTCATTTTCATCTAGAACCTGAACCACCACCCAAATaGTTGACTGTTTTGGAGAGGGACCACCATCTGTCA +
Preference number: 6 (lower is better)
Translates to: CHFHLEPEPPPK*LTVLERDHHLS
Trigger: TGACAGATGGTGGTCCCTCTCCAAAACAGTCAACCATTTGGGTGGTGGTTCAGGTTCTAGATGAAAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp TCTATCTGTGGCTTCAATCTGCAGGATCTCCGTGTCTaGAAGCACATCCTCGGAAATTGTCACATCGTAATT +
Preference number: 6 (lower is better)
Translates to: SICGFNLQDLRV*KHILGNCHIVI
Trigger: AATTACGATGTGACAATTTCCGAGGATGTGCTTCCAGACACGGAGATCCTGCAGATTGAAGCCACAGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp AAAGGGTCCCCATCGATAATGATATATATGATGCCTTaGCCTTCTGGACTGGTGGCATTGATGCTTAGGATG +
Preference number: 6 (lower is better)
Translates to: KGSPSIMIYMMP*PSGLVALMLRM
Trigger: CATCCTAAGCATCAATGCCACCAGTCCAGAAGGCCAAGGCATCATATATATCATTATCGATGGGGACCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp ATTGATGATGGCATAGCTGATCTGCCCATAAGTCCCTaGATCACCATCTGTGGCTCGAACATGAATTACCTT +
Preference number: 6 (lower is better)
Translates to: IDDGIADLPISP*ITICGSNMNYL
Trigger: AAGGTAATTCATGTTCGAGCCACAGATGGTGATCCAGGGACTTATGGGCAGATCAGCTATGCCATCATCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp CTGTTGTCGTTGACATTTCCTATTCGAATAGTCACATaGACCTCACTTTCATGGCGGTATGGTGAACCCCAG +
Preference number: 6 (lower is better)
Translates to: LLSLTFPIRIVT*TSLSWRYGEPQ
Trigger: CTGGGGTTCACCATACCGCCATGAAAGTGAGGTCAATGTGACTATTCGAATAGGAAATGTCAACGACAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp AATACCCCCTGTCTTGGGGTTGATCTTAAATTTCCCTaGTTCGTTCCCAGACCGGATGAGATAAGTGATCTC +
Preference number: 6 (lower is better)
Translates to: NTPCLGVDLKFP*FVPRPDEISDL
Trigger: GAGATCACTTATCTCATCCGGTCTGGGAACGAACAAGGGAAATTTAAGATCAACCCCAAGACAGGGGGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp GGTTCCCACTGGGACACTTTCATTCACATAAGCATCATACAGTGGTaGCTGAAATTCTGGGGTGTGGTCATTTGCATCTTCTATGCTGAT +
Preference number: 6 (lower is better)
Translates to: GSHWDTFIHISIIQW*LKFWGVVICIFYAD
Trigger: ATCAGCATAGAAGATGCAAATGACCACACCCCAGAATTTCAGCAACCACTGTATGATGCTTATGTGAATGAAAGTGTCCCAGTGGGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp GCTACTTTAAAGTGGAAAGCTGGGCTGGTTTCACGGTCAAGGCGTTaGTCAAGCTTAATAGTGCCTGTTTCCTGTTCTATGACGAATATG +
Preference number: 6 (lower is better)
Translates to: ATLKWKAGLVSRSRR*SSLIVPVSCSMTNM
Trigger: CATATTCGTCATAGAACAGGAAACAGGCACTATTAAGCTTGACAAACGCCTTGACCGTGAAACCAGCCCAGCTTTCCACTTTAAAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp AGAGACAGAAATACCCCCTGTCTTGGGGTTGATCTTAAATTTCCCTaGTTCGTTCCCAGACCGGATGAGATAAGTGATCTCAGCATTTGT +
Preference number: 6 (lower is better)
Translates to: RDRNTPCLGVDLKFP*FVPRPDEISDLSIC
Trigger: ACAAATGCTGAGATCACTTATCTCATCCGGTCTGGGAACGAACAAGGGAAATTTAAGATCAACCCCAAGACAGGGGGTATTTCTGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp CATTCTACTCTGGCTGTTGACGTAGGTCCTTGCTGCTaGGTTCTCATACACGGTAGCATTATAAATGGAATG +
Preference number: 6 (lower is better)
Translates to: HSTLAVDVGPCC*VLIHGSIINGM
Trigger: CATTCCATTTATAATGCTACCGTGTATGAGAACTCAGCAGCAAGGACCTACGTCAACAGCCAGAGTAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp TCATTCAACCACTTTCCTTCCTTAGCCAGGAAGAACTaGTCTAAAGGATCCCCAGCCACAATGGAAACAGAT +
Preference number: 6 (lower is better)
Translates to: SFNHFPSLARKN*SKGSPATMETD
Trigger: ATCTGTTTCCATTGTGGCTGGGGATCCTTTAGATCAGTTCTTCCTGGCTAAGGAAGGAAAGTGGTTGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp AATAGTCACATTGACCTCACTTTCATGGCGGTATGGTaGACCCCAGTCAGAGGCTCTAACAATGAATCTGTA +
Preference number: 6 (lower is better)
Translates to: NSHIDLTFMAVW*TPVRGSNNESV
Trigger: TACAGATTCATTGTTAGAGCCTCTGACTGGGGTTCACCATACCGCCATGAAAGTGAGGTCAATGTGACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp GTACTTTACAAGTTCAAGTTCATCGATATCGATCGCTaGGACTGCTGTGATGTGACCACCAACTGGAAAGTC +
Preference number: 6 (lower is better)
Translates to: VLYKFKFIDIDR*DCCDVTTNWKV
Trigger: GACTTTCCAGTTGGTGGTCACATCACAGCAGTCTCAGCGATCGATATCGATGAACTTGAACTTGTAAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp ACTGGTCGGCTACATAAACGATTCCAGTTGAGCTATTaGTGGCAAACTGCTGTGTATCTGTCAAGACTGAGT +
Preference number: 6 (lower is better)
Translates to: TGRLHKRFQLSY*WQTAVYLSRLS
Trigger: ACTCAGTCTTGACAGATACACAGCAGTTTGCCATCAATAGCTCAACTGGAATCGTTTATGTAGCCGACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp AACAGAGGCCTCGCTATAGAGGGAATAAGTAATCCTTaGATTTGCTCCATCATCGGGATCTATGGCTTGAAC +
Preference number: 6 (lower is better)
Translates to: NRGLAIEGISNP*ICSIIGIYGLN
Trigger: GTTCAAGCCATAGATCCCGATGATGGAGCAAATTCAAGGATTACTTATTCCCTCTATAGCGAGGCCTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp CTTTTCTGTAACAAACAGGGTGAAGTACCCAAGATGTaGTGTCTACACTTGAGTCTGATGCTGAGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: LFCNKQGEVPKM*CLHLSLMLSLH
Trigger: GTGGAGACTCAGCATCAGACTCAAGTGTAGACATCACATCTTGGGTACTTCACCCTGTTTGTTACAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp AAAGTAGTAGTAGAATTCTCCATTGGAACCAATATCTaGGTCTGTTGCAGTCACCTGGGCAACACTAGTCCT +
Preference number: 6 (lower is better)
Translates to: KVVVEFSIGTNI*VCCSHLGNTSP
Trigger: AGGACTAGTGTTGCCCAGGTGACTGCAACAGACGCAGATATTGGTTCCAATGGAGAATTCTACTACTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp CCATCTGTCACAGTCACCTCCAGAAAATGTTCTGCCTaGTGTTCTCGATCCAATTTCCTTGAAGTTGTTGTA +
Preference number: 6 (lower is better)
Translates to: PSVTVTSRKCSA*CSRSNFLEVVV
Trigger: TACAACAACTTCAAGGAAATTGGATCGAGAACAGCAGGCAGAACATTTTCTGGAGGTGACTGTGACAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp AATGCTATATTCCAACCGGTCAAAATCAGAGCTGTCTaGATCAGAGGCTTGTACACAGGTTACAAAATGGCC +
Preference number: 6 (lower is better)
Translates to: NAIFQPVKIRAV*IRGLYTGYKMA
Trigger: GGCCATTTTGTAACCTGTGTACAAGCCTCTGATGCAGACAGCTCTGATTTTGACCGGTTGGAATATAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp AATGAGGGAGTGCTTTACTGGGATGCCCCCATCTACTaGTTTGACAAAGAACGAAAGCACTGTATTTTTCAG +
Preference number: 6 (lower is better)
Translates to: NEGVLYWDAPIY*FDKERKHCIFQ
Trigger: CTGAAAAATACAGTGCTTTCGTTCTTTGTCAAAGCAGTAGATGGGGGCATCCCAGTAAAGCACTCCCTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp CACTGGGACACTTTCATTCACATAAGCATCATACAGTaGTTGCTGAAATTCTGGGGTGTGGTCATTTGCATC +
Preference number: 6 (lower is better)
Translates to: HWDTFIHISIIQ*LLKFWGVVICI
Trigger: GATGCAAATGACCACACCCCAGAATTTCAGCAACCACTGTATGATGCTTATGTGAATGAAAGTGTCCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp GATCTGACTTTCAAAGTGCAGTGTTGTACTAACTCATaGTCCAGCATTCGTGCTGTCAGGATTAAGCCACTT +
Preference number: 6 (lower is better)
Translates to: DLTFKVQCCTNS*SSIRAVRIKPL
Trigger: AAGTGGCTTAATCCTGACAGCACGAATGCTGGACCATGAGTTAGTACAACACTGCACTTTGAAAGTCAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp ACTCCCTGGCAAGCCACTTTTTCAAAGAGAGGGCTGTaGTCGTTGACATTTCCTATTCGAATAGTCACATTG +
Preference number: 6 (lower is better)
Translates to: TPWQATFSKRGL*SLTFPIRIVTL
Trigger: CAATGTGACTATTCGAATAGGAAATGTCAACGACAACAGCCCTCTCTTTGAAAAAGTGGCTTGCCAGGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp ATGCAGGGATTTGCTCTGGTGTACATTATAATCCCATaGCTTTGCAGTGTTCGAAGACGCAGAGCTAGTTTG +
Preference number: 6 (lower is better)
Translates to: MQGFALVYIIIP*LCSVRRRRASL
Trigger: CAAACTAGCTCTGCGTCTTCGAACACTGCAAAGCAATGGGATTATAATGTACACCAGAGCAAATCCCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CAA 90 bp TTGTTGGGGCATGTTCATTTATGCGCTCAATGTGAACATAAAGCTTaGCAGTACTGCTCACTCCATTGTTCCCATACAGTTTCATTCCCC +
Preference number: 6 (lower is better)
Translates to: LLGHVHLCAQCEHKA*QYCSLHCSHTVSFP
Trigger: GGGGAATGAAACTGTATGGGAACAATGGAGTGAGCAGTACTGCAAAGCTTTATGTTCACATTGAGCGCATAAATGAACATGCCCCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp ATAACTCCCTGGCAAGCCACTTTTTCAAAGAGAGGGCTGTTGTCGTaGACATTTCCTATTCGAATAGTCACATTGACCTCACTTTCATGG +
Preference number: 6 (lower is better)
Translates to: ITPWQATFSKRGLLS*TFPIRIVTLTSLSW
Trigger: CCATGAAAGTGAGGTCAATGTGACTATTCGAATAGGAAATGTCAACGACAACAGCCCTCTCTTTGAAAAAGTGGCTTGCCAGGGAGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp GGTTTTCCGCCATCCTTGGCTAGGATGGTGACTCCATACTCAATGTaGGACAAGTCAGAGTTGAATGCTTCCTTTAAAATAACATTCCCT +
Preference number: 6 (lower is better)
Translates to: GFPPSLARMVTPYSM*DKSELNASFKITFP
Trigger: AGGGAATGTTATTTTAAAGGAAGCATTCAACTCTGACTTGTCCAACATTGAGTATGGAGTCACCATCCTAGCCAAGGATGGCGGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp AATTCATTGTCCCGATCTCCATTCACAATGGAAAAATaGATCTGTCCGTTGGGCTGGCTGTCTACATCTTCT +
Preference number: 6 (lower is better)
Translates to: NSLSRSPFTMEK*ICPLGWLSTSS
Trigger: AGAAGATGTAGACAGCCAGCCCAACGGACAGATTCATTTTTCCATTGTGAATGGAGATCGGGACAATGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp TTATGCGCTCAATGTGAACATAAAGCTTTGCAGTACTaGTCACTCCATTGTTCCCATACAGTTTCATTCCCC +
Preference number: 6 (lower is better)
Translates to: LCAQCEHKALQY*SLHCSHTVSFP
Trigger: GGGGAATGAAACTGTATGGGAACAATGGAGTGAGCAGTACTGCAAAGCTTTATGTTCACATTGAGCGCATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp GGATTTGCTCTGGTGTACATTATAATCCCATTGCTTTaGAGTGTTCGAAGACGCAGAGCTAGTTTGAAATCC +
Preference number: 6 (lower is better)
Translates to: GFALVYIIIPLL*SVRRRRASLKS
Trigger: GGATTTCAAACTAGCTCTGCGTCTTCGAACACTGCAAAGCAATGGGATTATAATGTACACCAGAGCAAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 72 bp CTGAAAACAGCTGCTGACCACTCTCTGCCTTGTCCCTaGCTTCTATTTTCAAAGAATAATTGGCTTTGGATT +
Preference number: 6 (lower is better)
Translates to: LKTAADHSLPCP*LLFSKNNWLWI
Trigger: AATCCAAAGCCAATTATTCTTTGAAAATAGAAGCCAGGGACAAGGCAGAGAGTGGTCAGCAGCTGTTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp AAAAAGCCTTCCTCGTCTCCGGACACTATTCTGTATTaGATATCCCAGGATAGATCTATTAAGGTGATGCCC +
Preference number: 6 (lower is better)
Translates to: KKPSSSPDTILY*ISQDRSIKVMP
Trigger: GGGCATCACCTTAATAGATCTATCCTGGGATATCAAATACAGAATAGTGTCCGGAGACGAGGAAGGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp ACCGGGCTGTTGTCATTCACATCAGAAATATCAATGTaGACAGTTGCAGTTGATGACATTGCAGGAATGCCA +
Preference number: 6 (lower is better)
Translates to: TGLLSFTSEISM*TVAVDDIAGMP
Trigger: TGGCATTCCTGCAATGTCATCAACTGCAACTGTCAACATTGATATTTCTGATGTGAATGACAACAGCCCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp TCTGCTTTGAAAAAGCCTTCCTCGTCTCCGGACACTATTCTGTATTaGATATCCCAGGATAGATCTATTAAGGTGATGCCCATTCTACTC +
Preference number: 6 (lower is better)
Translates to: SALKKPSSSPDTILY*ISQDRSIKVMPILL
Trigger: GAGTAGAATGGGCATCACCTTAATAGATCTATCCTGGGATATCAAATACAGAATAGTGTCCGGAGACGAGGAAGGCTTTTTCAAAGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp TCGATAATGATATATATGATGCCTTGGCCTTCTGGACTGGTGGCATaGATGCTTAGGATGGGTGTGTTCATTCTGATGTCTTCATTGACA +
Preference number: 6 (lower is better)
Translates to: SIMIYMMPWPSGLVA*MLRMGVFILMSSLT
Trigger: TGTCAATGAAGACATCAGAATGAACACACCCATCCTAAGCATCAATGCCACCAGTCCAGAAGGCCAAGGCATCATATATATCATTATCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp TCCAATACCTTGATATCTACATCCACAGTAAACACAATGTCTACTTaGTCCAGGGGTATAGTGGCTGCTACTTTAAAGTGGAAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: SNTLISTSTVNTMST*SRGIVAATLKWKAG
Trigger: CCCAGCTTTCCACTTTAAAGTAGCAGCCACTATACCCCTGGACAAAGTAGACATTGTGTTTACTGTGGATGTAGATATCAAGGTATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp GCATATGTTGGCTCTTTTTCCAACGAGAAAGGAACATaGGTGACTACATGGATTGTTGGGGCATGTTCATTT +
Preference number: 6 (lower is better)
Translates to: AYVGSFSNEKGT*VTTWIVGACSF
Trigger: AAATGAACATGCCCCAACAATCCATGTAGTCACTCATGTTCCTTTCTCGTTGGAAAAAGAGCCAACATATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp CATTGCTTTGCAGTGTTCGAAGACGCAGAGCTAGTTTaGAATCCTCTTCTTTGCTATTTTCAGAAAGCCGAT +
Preference number: 6 (lower is better)
Translates to: HCFAVFEDAELV*NPLLCYFQKAD
Trigger: ATCGGCTTTCTGAAAATAGCAAAGAAGAGGATTTCAAACTAGCTCTGCGTCTTCGAACACTGCAAAGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp CTTGCCATCCACAATCTTCAGAATTATGCAGGGATTTaGTCTGGTGTACATTATAATCCCATTGCTTTGCAG +
Preference number: 6 (lower is better)
Translates to: LAIHNLQNYAGI*SGVHYNPIALQ
Trigger: CTGCAAAGCAATGGGATTATAATGTACACCAGAGCAAATCCCTGCATAATTCTGAAGATTGTGGATGGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS CCA 72 bp CAACGAGAAAGGAACATGAGTGACTACATGGATTGTTaGGGCATGTTCATTTATGCGCTCAATGTGAACATA +
Preference number: 6 (lower is better)
Translates to: QRERNMSDYMDC*GMFIYALNVNI
Trigger: TATGTTCACATTGAGCGCATAAATGAACATGCCCCAACAATCCATGTAGTCACTCATGTTCCTTTCTCGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp ATTCACATAAGCATCATACAGTGGTTGCTGAAATTCTaGGGTGTGGTCATTTGCATCTTCTATGCTGATGGT +
Preference number: 6 (lower is better)
Translates to: IHISIIQWLLKF*GVVICIFYADG
Trigger: ACCATCAGCATAGAAGATGCAAATGACCACACCCCAGAATTTCAGCAACCACTGTATGATGCTTATGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp CCAGTCAGAGGCTCTAACAATGAATCTGTAAATTTCTaGGGAGGATTCAAAATCCAGTTCTTCAGTTGTGCT +
Preference number: 6 (lower is better)
Translates to: PVRGSNNESVNF*GGFKIQFFSCA
Trigger: AGCACAACTGAAGAACTGGATTTTGAATCCTCCCCAGAAATTTACAGATTCATTGTTAGAGCCTCTGACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp TTGAACAGCAGCATAGTATGGGAGGCCCACAAAGACTaGAGAATTGTCATTTATGTCTTCAATGTTAACCCT +
Preference number: 6 (lower is better)
Translates to: LNSSIVWEAHKD*RIVIYVFNVNP
Trigger: AGGGTTAACATTGAAGACATAAATGACAATTCTCCAGTCTTTGTGGGCCTCCCATACTATGCTGCTGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp GATCTCCATTCACAATGGAAAAATGAATCTGTCCGTTaGGCTGGCTGTCTACATCTTCTGCTATTAGCAAAA +
Preference number: 6 (lower is better)
Translates to: DLHSQWKNESVR*AGCLHLLLLAK
Trigger: TTTTGCTAATAGCAGAAGATGTAGACAGCCAGCCCAACGGACAGATTCATTTTTCCATTGTGAATGGAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp TATGAAATAACTCCCTGGCAAGCCACTTTTTCAAAGAGAGGGCTGTaGTCGTTGACATTTCCTATTCGAATAGTCACATTGACCTCACTT +
Preference number: 6 (lower is better)
Translates to: YEITPWQATFSKRGL*SLTFPIRIVTLTSL
Trigger: AAGTGAGGTCAATGTGACTATTCGAATAGGAAATGTCAACGACAACAGCCCTCTCTTTGAAAAAGTGGCTTGCCAGGGAGTTATTTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp TTCAGAATTATGCAGGGATTTGCTCTGGTGTACATTATAATCCCATaGCTTTGCAGTGTTCGAAGACGCAGAGCTAGTTTGAAATCCTCT +
Preference number: 6 (lower is better)
Translates to: FRIMQGFALVYIIIP*LCSVRRRRASLKSS
Trigger: AGAGGATTTCAAACTAGCTCTGCGTCTTCGAACACTGCAAAGCAATGGGATTATAATGTACACCAGAGCAAATCCCTGCATAATTCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409404.6
ENST00000525166.6
ENST00000533797.1
CDS GCA 72 bp TTTATAAACCTCCTTCTTAACAGTATTCAGTGGCCGTaGTGTAACAATCAGACCCGACCGAGGATTAATTTT +
Preference number: 6 (lower is better)
Translates to: FINLLLNSIQWP*CNNQTRPRINF
Trigger: AAAATTAATCCTCGGTCGGGTCTGATTGTTACAGCACGGCCACTGAATACTGTTAAGAAGGAGGTTTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CCA 72 bp GCTTTGACAAAGAACGAAAGCACTGTATTTTTCAGCTaGTTAAAATTACCCTTTGTGACCATCCAGCCATTG +
Preference number: 6 (lower is better)
Translates to: ALTKNESTVFFS*LKLPFVTIQPL
Trigger: CAATGGCTGGATGGTCACAAAGGGTAATTTTAACCAGCTGAAAAATACAGTGCTTTCGTTCTTTGTCAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp CATGTTCATTTATGCGCTCAATGTGAACATAAAGCTTaGCAGTACTGCTCACTCCATTGTTCCCATACAGTT +
Preference number: 6 (lower is better)
Translates to: HVHLCAQCEHKA*QYCSLHCSHTV
Trigger: AACTGTATGGGAACAATGGAGTGAGCAGTACTGCAAAGCTTTATGTTCACATTGAGCGCATAAATGAACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp TTGATATCTACATCCACAGTAAACACAATGTCTACTTaGTCCAGGGGTATAGTGGCTGCTACTTTAAAGTGG +
Preference number: 6 (lower is better)
Translates to: LISTSTVNTMST*SRGIVAATLKW
Trigger: CCACTTTAAAGTAGCAGCCACTATACCCCTGGACAAAGTAGACATTGTGTTTACTGTGGATGTAGATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp AACAGGCATCCCTTCCATTATAATGGTGTCATAGCTTaGAGTTTCAAAGACTGGCTTGTTGTCATTCAAATC +
Preference number: 6 (lower is better)
Translates to: NRHPFHYNGVIA*SFKDWLVVIQI
Trigger: GATTTGAATGACAACAAGCCAGTCTTTGAAACTTCAAGCTATGACACCATTATAATGGAAGGGATGCCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp ATGTTCATTTATGCGCTCAATGTGAACATAAAGCTTTaGAGTACTGCTCACTCCATTGTTCCCATACAGTTT +
Preference number: 6 (lower is better)
Translates to: MFIYALNVNIKL*STAHSIVPIQF
Trigger: AAACTGTATGGGAACAATGGAGTGAGCAGTACTGCAAAGCTTTATGTTCACATTGAGCGCATAAATGAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp CTCAGATCATTCATATCTAAAACCTGTATATTCACTTaGGTCCATGCTTCCAAATCCTCTCCTCTGACAGAA +
Preference number: 6 (lower is better)
Translates to: LRSFISKTCIFT*VHASKSSPLTE
Trigger: TTCTGTCAGAGGAGAGGATTTGGAAGCATGGACCAAAGTGAATATACAGGTTTTAGATATGAATGATCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp TTGGCTAGGATGGTGACTCCATACTCAATGTTGGACAAGTCAGAGTaGAATGCTTCCTTTAAAATAACATTCCCTGAATTAGGGTTAATT +
Preference number: 6 (lower is better)
Translates to: LARMVTPYSMLDKSE*NASFKITFPELGLI
Trigger: AATTAACCCTAATTCAGGGAATGTTATTTTAAAGGAAGCATTCAACTCTGACTTGTCCAACATTGAGTATGGAGTCACCATCCTAGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp CTTGAAGTTTCAAAGACTGGCTTGTTGTCATTCAAATCCAATACCTaGATATCTACATCCACAGTAAACACAATGTCTACTTTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: LEVSKTGLLSFKSNT*ISTSTVNTMSTLSR
Trigger: CCTGGACAAAGTAGACATTGTGTTTACTGTGGATGTAGATATCAAGGTATTGGATTTGAATGACAACAAGCCAGTCTTTGAAACTTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS TCA 72 bp TCCAGTTCTTCAGTTGTGCTAATAACACCTGTAAACTaGTTAATGACAAATGGTAACAAATTCAGGCTAGCG +
Preference number: 6 (lower is better)
Translates to: SSSSVVLITPVN*LMTNGNKFRLA
Trigger: CGCTAGCCTGAATTTGTTACCATTTGTCATTAATCAGTTTACAGGTGTTATTAGCACAACTGAAGAACTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 90 bp CGAGGATTAATTTTAAAGTACACTGCATCCTCACCAGGAGATAATTaGTATTCCACATCTATCGGTTCAGGACTTAATTTTACTATAGCA +
Preference number: 6 (lower is better)
Translates to: RGLILKYTASSPGDN*YSTSIGSGLNFTIA
Trigger: TGCTATAGTAAAATTAAGTCCTGAACCGATAGATGTGGAATACAAATTATCTCCTGGTGAGGATGCAGTGTACTTTAAAATTAATCCTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp TATTTTAAGGGCTCATTAAGGCGATTTCCAACTGCATaGACAATAGCAACTTTGGTTATGTTAGTGTTGTTC +
Preference number: 6 (lower is better)
Translates to: YFKGSLRRFPTA*TIATLVMLVLF
Trigger: GAACAACACTAACATAACCAAAGTTGCTATTGTCAATGCAGTTGGAAATCGCCTTAATGAGCCCTTAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS GCA 72 bp TTAAGCCACTTGAGCTATCTATGTGAAAATAATCTGTaGTATTGTAGGTATCCTGGACAATCTGATAATGTA +
Preference number: 6 (lower is better)
Translates to: LSHLSYLCENNL*YCRYPGQSDNV
Trigger: TACATTATCAGATTGTCCAGGATACCTACAATAGCACAGATTATTTTCACATAGATAGCTCAAGTGGCTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6
CDS CAA 72 bp ATTTTAAAGTACACTGCATCCTCACCAGGAGATAATTaGTATTCCACATCTATCGGTTCAGGACTTAATTTT +
Preference number: 6 (lower is better)
Translates to: ILKYTASSPGDN*YSTSIGSGLNF
Trigger: AAAATTAAGTCCTGAACCGATAGATGTGGAATACAAATTATCTCCTGGTGAGGATGCAGTGTACTTTAAAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409404.6
ENST00000525166.6