RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000083857

Ensembl transcript IDs: ENST00000441802.7, ENST00000500085.2, ENST00000503253.1, ENST00000507105.1, ENST00000507662.1, ENST00000508035.1, ENST00000509537.1, ENST00000509647.1, ENST00000509927.1, ENST00000512347.1, ENST00000512772.5, ENST00000614102.4

Found 1306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTAGCCTCCAGGGTAATAGTCCGTATCGATGGCGTTTGGATCTGCTaGGTACAGGGGTGTCTGCTCATCAATCACCTCATAGTTGGGGAA +
Preference number: 1 (lower is better)
Translates to: VASRVIVRIDGVWIC*VQGCLLINHLIVGE
Trigger: TTCCCCAACTATGAGGTGATTGATGAGCAGACACCCCTGTACTCAGCAGATCCAAACGCCATCGATACGGACTATTACCCTGGAGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509537.1
3UTR CCA 90 bp GATCTGCTGAGTACAGGGGTGTCTGCTCATCAATCACCTCATAGTTaGGGAACTCTTGTATGTCCGGCAGAGGAACGCTTGGCATCCAAT +
Preference number: 1 (lower is better)
Translates to: DLLSTGVSAHQSPHS*GTLVCPAEERLASN
Trigger: ATTGGATGCCAAGCGTTCCTCTGCCGGACATACAAGAGTTCCCCAACTATGAGGTGATTGATGAGCAGACACCCCTGTACTCAGCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
3UTR CCA 90 bp AATCACTTTCGATGTCGTAGCCTCCAGGGTAATAGTCCGTATCGATaGCGTTTGGATCTGCTGAGTACAGGGGTGTCTGCTCATCAATCA +
Preference number: 1 (lower is better)
Translates to: NHFRCRSLQGNSPYR*RLDLLSTGVSAHQS
Trigger: TGATTGATGAGCAGACACCCCTGTACTCAGCAGATCCAAACGCCATCGATACGGACTATTACCCTGGAGGCTACGACATCGAAAGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
3UTR-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGCTTGGAAGCACTGCTaGAAAGAACAGCGCGGATTA +
Preference number: 2 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLAWKHC*KEQRGL
Trigger: TAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
3UTR-3UTR GCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCGCTTGGAAGCACTGCTaGAAAGAACAGCGCGGATTA +
Preference number: 2 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCAWKHC*KEQRGL
Trigger: TAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGC...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
3UTR-3UTR GCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCAAAGCTTGGAAGCACTaGTGCAAAGAACAGCGCGGA +
Preference number: 2 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCKAWKH*CKEQRG
Trigger: TCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
3UTR-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGATCCAGCGCAGCCATaGCCATTCGGCTCACCAAAA +
Preference number: 2 (lower is better)
Translates to: LTMTVVGTLEMASTSRGADPAQP*PFGSPK
Trigger: TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
3UTR CAA 90 bp TTTCGATGTCGTAGCCTCCAGGGTAATAGTCCGTATCGATGGCGTTaGGATCTGCTGAGTACAGGGGTGTCTGCTCATCAATCACCTCAT +
Preference number: 2 (lower is better)
Translates to: FRCRSLQGNSPYRWR*DLLSTGVSAHQSPH
Trigger: ATGAGGTGATTGATGAGCAGACACCCCTGTACTCAGCAGATCCAAACGCCATCGATACGGACTATTACCCTGGAGGCTACGACATCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
3UTR-3UTR TCA 90 bp GATCTGCTGAGTACAGGGGTGTCTGCTCATCAATCACCTCATAGTTGGGGAACTTCTGATGTATCCCAGTaGTACCAGAGGCCCAATCAG +
Preference number: 2 (lower is better)
Translates to: DLLSTGVSAHQSPHSWGTSDVSQ*YQRPNQ
Trigger: CTGATTGGGCCTCTGGTATCACTGGGATACATCAGA...AGTTCCCCAACTATGAGGTGATTGATGAGCAGACACCCCTGTACTCAGCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509537.1
3UTR-3UTR TCA 90 bp GATCTGCTGAGTACAGGGGTGTCTGCTCATCAATCACCTCATAGTTGGGGAACTGCTTGGCATCCAATCTaGTGTATCCCAGTGATACCA +
Preference number: 2 (lower is better)
Translates to: DLLSTGVSAHQSPHSWGTAWHPI*CIPVIP
Trigger: TGGTATCACTGGGATACATCAGATTGGATGCCAAGC...AGTTCCCCAACTATGAGGTGATTGATGAGCAGACACCCCTGTACTCAGCAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509537.1
3UTR-3UTR GCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATAAAGCTTGGAAGCACTaGTGCAAAGAACAGCGCGGA +
Preference number: 2 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADKAWKH*CKEQRG
Trigger: TCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTT...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
3UTR-3UTR CCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTTGGGACACTGGAAATaGCTAGCACGTCCAGAGGCG +
Preference number: 2 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYLGHWK*LARPEA
Trigger: CGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
3UTR-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCATACATGAATCATGCTaGCAACACAGGACTGATTTT +
Preference number: 2 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPIHESC*QHRTDF
Trigger: AAAATCAGTCCTGTGTTGTCAGCATGATTCATGTAT...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
3UTR CCA 72 bp CGATGTCGTAGCCTCCAGGGTAATAGTCCGTATCGATaGCGTTTGGATCTGCTGAGTACAGGGGTGTCTGCT +
Preference number: 3 (lower is better)
Translates to: RCRSLQGNSPYR*RLDLLSTGVSA
Trigger: AGCAGACACCCCTGTACTCAGCAGATCCAAACGCCATCGATACGGACTATTACCCTGGAGGCTACGACATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
3UTR-3UTR CAA 90 bp CAGGGTAATAGTCCGTATCGATGGCGTTTGGATCTGCTGAGTACAGGGGTGTCTCCGGCAGAGGAACGCTaGGCATCCAATCTGATGTAT +
Preference number: 3 (lower is better)
Translates to: QGNSPYRWRLDLLSTGVSPAEER*ASNLMY
Trigger: ATACATCAGATTGGATGCCAAGCGTTCCTCTGCCGG...AGACACCCCTGTACTCAGCAGATCCAAACGCCATCGATACGGACTATTACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
3UTR CCA 72 bp AGTACAGGGGTGTCTGCTCATCAATCACCTCATAGTTaGGGAACTCTTGTATGTCCGGCAGAGGAACGCTTG +
Preference number: 3 (lower is better)
Translates to: STGVSAHQSPHS*GTLVCPAEERL
Trigger: CAAGCGTTCCTCTGCCGGACATACAAGAGTTCCCCAACTATGAGGTGATTGATGAGCAGACACCCCTGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
3UTR TCA 72 bp AGGGTAATAGTCCGTATCGATGGCGTTTGGATCTGCTaGGTACAGGGGTGTCTGCTCATCAATCACCTCATA +
Preference number: 3 (lower is better)
Translates to: RVIVRIDGVWIC*VQGCLLINHLI
Trigger: TATGAGGTGATTGATGAGCAGACACCCCTGTACTCAGCAGATCCAAACGCCATCGATACGGACTATTACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
3UTR-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATAAATCCCAAAAGACGTaGGGAAATGGCACAGCCGAT +
Preference number: 3 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYKSQKT*GNGTAD
Trigger: ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTT...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAGCTCGCGCGTCCGCATaGTACCTGCCGCACGAGCCG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKARASA*YLPHEP
Trigger: CGGCTCGTGCGGCAGGTACCATGCGGACGCGCGAGC...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATGGGGGAGGCAGGTTTaGCGCCACGCTGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKWGRQV*RHAADR
Trigger: GCGGTCTGCAGCGTGGCGCCAAACCTGCCTCCCCCA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCCAGCACCTGCACCCTaGCCTTTGTTCGCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRPAPAP*PLFAPP
Trigger: TGGAGGCGCGAACAAAGGTCAGGGTGCAGGTGCTGG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCCTGCATCCGTGGCGCTaGCTCTTGCGATACTGGTCC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLLHPWR*LLRYWS
Trigger: GGACCAGTATCGCAAGAGTCAGCGCCACGGATGCAG...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGGCAACGTCGCTCAGTaGAGGCGTGCCTCCATCAGT +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLGNVAQ*RRASIS
Trigger: ACTGATGGAGGCACGCCTTCACTGAGCGACGTTGCC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAGAACTCCCTGGGCACTaGCCAAACCTGCCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKELPGH*PNLPLG
Trigger: TCCCAGCGGCAGGTTTGGTCAGTGCCCAGGGAGTTC...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGGCACCTTCCCTCTTTaGAGAGACACACCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLGTFPL*RDTPLP
Trigger: GGGCAGCGGTGTGTCTCTGCAAAGAGGGAAGGTGCC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGGTTTGGCGCCACGCTaGAGACCGCCACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLGLAPR*RPPLLF
Trigger: GAAAAGCAGTGGCGGTCTGCAGCGTGGCGCCAAACC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGTGGCGCAGTCTTCCGTaGCCGTCAGGAAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRWRSLP*PSGSSL
Trigger: CAGGCTGCTTCCTGACGGCCACGGAAGACTGCGCCA...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATCTGGCAAGGGTTGCTaGCGCAGTCTTCCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPSGKGC*RSLPWP
Trigger: CGGCCACGGAAGACTGCGCCAGCAACCCTTGCCAGA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGGCGTGGACACATACTaGTTGGGCGCAGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLGVDTY*LGAASS
Trigger: CGAGGATGCTGCGCCCAACCAGTATGTGTCCACGCC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACCAGCACCTGCACCCTaGCCTTTGTTCGCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKPAPAP*PLFAPP
Trigger: TGGAGGCGCGAACAAAGGTCAGGGTGCAGGTGCTGG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACCTTGTCGGTGGCTATaGCGTGATAGAGCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPPCRWL*RDRAAP
Trigger: GGGAGCCGCTCTATCACGTCATAGCCACCGACAAGG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATGTAGGAGGAAGCGGTaGACCACGGGGCGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPCRRKR*TTGRGH
Trigger: ATGACCACGCCCCGTGGTTCACCGCTTCCTCCTACA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATGTAGGAGGAAGCGGTaGACCACGGGGCGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKCRRKR*TTGRGH
Trigger: ATGACCACGCCCCGTGGTTCACCGCTTCCTCCTACA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAGCAGCATCCTCGCAGTaGCGTCCCCTGTACTCGTGG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKAASSQ*RPLYSW
Trigger: CCACGAGTACAGGGGACGTCACTGCGAGGATGCTGC...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGCAGCATCCTCGCAGTaGCGTCCCCTGTACTCGTGG +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIAASSQ*RPLYSW
Trigger: CCACGAGTACAGGGGACGTCACTGCGAGGATGCTGC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCCGTCCGCATGGTACCTaGCGCACGAGCCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSRPHGT*RTSRSR
Trigger: GCGGGAGCGGCTCGTGCGGCAGGTACCATGCGGACG...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCTGGACCACAGGGCTGTaGACCTGGATGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLWTTGL*TWMLSA
Trigger: TGCAGAGAGCATCCAGGTGCACAGCCCTGTGGTCCA...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCCGCTCAGTGAAGGCGTaGCTCCATCAGTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLRSVKA*LHQWPL
Trigger: TAGAGGCCACTGATGGAGGCACGCCTTCACTGAGCG...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGGCACCTTCCCTCTTTaGAGAGACACACCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPGTFPL*RDTPLP
Trigger: GGGCAGCGGTGTGTCTCTGCAAAGAGGGAAGGTGCC...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCCATTCTGGCAAGGGTTaGTGGCGCAGTCTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLHSGKG*WRSLPW
Trigger: CCACGGAAGACTGCGCCAGCAACCCTTGCCAGAATG...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGGTTTGGCGCCACGCTaGAGACCGCCACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPGLAPR*RPPLLF
Trigger: GAAAAGCAGTGGCGGTCTGCAGCGTGGCGCCAAACC...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACACAGACATGGGCATaGTCTCGACAGCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKTQTWA*SRQRAP
Trigger: AGGCGCCCGCTGTCGAGAGCATGCCCATGTCTGTGT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAACTGTTAGCCTGCACGTaGACCACAGGGCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKLLACT*TTGLCT
Trigger: GGTGCACAGCCCTGTGGTCCACGTGCAGGCTAACAG...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCCTGCGTCGGCATCTGTaGCCTGCACTCTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLLRRHL*PALLSA
Trigger: TGCTGACAAGAGTGCAGGCCACAGATGCCGACGCAG...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGGCAGTCAGCCTCCTTaGCAAGCCTTGATCCACAGC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLGSQPP*QALIHS
Trigger: GCTGTGGATCAAGGCTTGCCAAGGAGGCTGACTGCC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAACCGCTGCCCTGTGGTaGCGGGGAGTCACAAAACTC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPTAALW*RGVTKL
Trigger: GAGTTTTGTGACTCCCCGCCACCACAGGGCAGCGGT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACACACCGCTGCCCTGTaGTGGCGGGGAGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPHTAAL*WRGVTK
Trigger: TTTTGTGACTCCCCGCCACCACAGGGCAGCGGTGTG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGGTCACCTCTTCGAAGTaGCCGTCGTCCCCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRVTSSK*PSSPLS
Trigger: TGAGAGCGGGGACGACGGCCACTTCGAAGAGGTGAC...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCCTTGTCGGTGGCTATaGCGTGATAGAGCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIPCRWL*RDRAAP
Trigger: GGGAGCCGCTCTATCACGTCATAGCCACCGACAAGG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGTCACGAAATGCCCATaGGGGGCGTGCTCGCTAATT +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLVTKCP*GACSLI
Trigger: AATTAGCGAGCACGCCCCTCATGGGCATTTCGTGAC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCTTGGCCGTTGGTTCCTaGGTCAGCATCAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLLAVGS*VSIRCP
Trigger: AGGGCATCTGATGCTGACTCAGGAACCAACGGCCAA...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCTGTCGGCCACCGTCGTaGACTTCCCATCTGTTACGC +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCCRPPS*TSHLLR
Trigger: GCGTAACAGATGGGAAGTTCACGACGGTGGCCGACA...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGCTGCAGAGTTCTCCTaGACGGTGACGTTGTACTCG +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLAAEFS*TVTLYS
Trigger: CGAGTACAACGTCACCGTGCAGGAGAACTCTGCAGC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGGCTGTGCACCTGGATaGTCTCTGCAATCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLGCAPG*SLQSLH
Trigger: GTGCAGAGATTGCAGAGAGCATCCAGGTGCACAGCC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATGGACCACAGGGCTGTaGACCTGGATGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKWTTGL*TWMLSA
Trigger: TGCAGAGAGCATCCAGGTGCACAGCCCTGTGGTCCA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCACTTCCAGGGCCACTaGGTGCCACTGCCCATCATT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCHFQGH*VPLPII
Trigger: AATGATGGGCAGTGGCACGCAGTGGCCCTGGAAGTG...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCATTCTGGCAAGGGTTaGTGGCGCAGTCTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRHSGKG*WRSLPW
Trigger: CCACGGAAGACTGCGCCAGCAACCCTTGCCAGAATG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATCACAGAGGGCCCCGTaGAGGCAAGGGTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKSQRAP*RQGFPE
Trigger: CTCTGGAAACCCTTGCCTGCACGGGGCCCTCTGTGA...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAACTCGTGGCTGCAGTTaGAGTGATAGGAGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPTRGCS*SDRSRA
Trigger: CGCACGGCTCCTATCACTGCAACTGCAGCCACGAGT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGACTCGTGGCTGCAGTTaGAGTGATAGGAGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRTRGCS*SDRSRA
Trigger: CGCACGGCTCCTATCACTGCAACTGCAGCCACGAGT...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGGTTTGGCGCCACGCTaGAGACCGCCACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIGLAPR*RPPLLF
Trigger: GAAAAGCAGTGGCGGTCTGCAGCGTGGCGCCAAACC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAGTCAGACTTCCGTGTaGTGCTGGGAATCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKSQTSV*CWESRG
Trigger: GCCCCTGGATTCCCAGCAGCACACGGAAGTCTGACT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGATCCAGCGCAGCCATaGCCATTCGGCTCACCAAAA +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLDPAQP*PFGSPK
Trigger: TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCCGAAGGGCGTGCCAGTaGTTGACAGAACTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLRRACQ*LTELLK
Trigger: CTTCAGGAGTTCTGTCAACCACTGGCACGCCCTTCG...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAAGGCGTACACAGACATaGGCATGCTCTCGACAGCGG +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPRRTQT*ACSRQR
Trigger: CCGCTGTCGAGAGCATGCCCATGTCTGTGTACGCCT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGAGGCGTACACAGACATaGGCATGCTCTCGACAGCGG +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRRRTQT*ACSRQR
Trigger: CCGCTGTCGAGAGCATGCCCATGTCTGTGTACGCCT...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATCACCATTGGCACCCTaGTCGCAGTCATCCACTGTC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKSPLAP*SQSSTV
Trigger: GACAGTGGATGACTGCGATCAGGGTGCCAATGGTGA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCAAGCCCCAGTCTaGTGCACGAATCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIRQAPV*CTNPQS
Trigger: ACTCTGAGGATTCGTGCATCAGACTGGGGCTTGCCG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCGTCACGAAATGCCCATaGGGGGCGTGCTCGCTAATT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCVTKCP*GACSLI
Trigger: AATTAGCGAGCACGCCCCTCATGGGCATTTCGTGAC...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATTGGCCGTTGGTTCCTaGGTCAGCATCAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKLAVGS*VSIRCP
Trigger: AGGGCATCTGATGCTGACTCAGGAACCAACGGCCAA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCGGGCGCGTTGTCATTaGCATCGGACACATCGATGT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCRARCH*HRTHRC
Trigger: ACATCGATGTGTCCGATGTCAATGACAACGCGCCCG...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATGTCGGCCACCGTCGTaGACTTCCCATCTGTTACGC +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKCRPPS*TSHLLR
Trigger: GCGTAACAGATGGGAAGTTCACGACGGTGGCCGACA...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAACACGATCGAAGGGCGTaGCAGTGGTTGACAGAACTC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKHDRRA*QWLTEL
Trigger: GAGTTCTGTCAACCACTGGCACGCCCTTCGATCGTG...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGACAACGTGGGCCACTaGAGAAGGCTTATGTTCCTC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLDNVGH*RRLMFL
Trigger: GAGGAACATAAGCCTTCTGCAGTGGCCCACGTTGTC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCTCGGCATCTGTGGCCTaGACTCTTGTCAGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCSASVA*TLVSSV
Trigger: AACGCTGCTGACAAGAGTGCAGGCCACAGATGCCGA...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAGAGTCCCTGGGGCTGTaGCCGATGCAGTATGAACTT +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKESLGL*PMQYEL
Trigger: AAGTTCATACTGCATCGGGCACAGCCCCAGGGACTC...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATGTCGACAACACACGTaGCCCCATAGAGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPCRQHT*PHRGMA
Trigger: AGCCATGCCTCTATGGGGGCACGTGTGTTGTCGACA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAACCCTGTACTCGTGGCTaGAGTTGCAGTGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKPCTRG*SCSDRS
Trigger: GCTCCTATCACTGCAACTGCAGCCACGAGTACAGGG...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAGATCCAGCGCAGCCATaGCCATTCGGCTCACCAAAA +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKDPAQP*PFGSPK
Trigger: TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATC...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCCGGAGCACATTCATTaGCCTGTTCGATGTGCACCG +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRPEHIH*PVRCAP
Trigger: CGGTGCACATCGAACAGGCCAATGAATGTGCTCCGG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGCTGGAAAACACGGGTaGGTGCAGGTTCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLAGKHG*VQVLIH
Trigger: GTGAATGAGAACCTGCACCCACCCGTGTTTTCCAGC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGTCTCCCCATCTCTTCTaGCGTCCTCATCATGAGCCG +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRSPHLF*RPHHEP
Trigger: CGGCTCATGATGAGGACGCCAGAAGAGATGGGGAGA...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCAGAGCGGCTCCCGTCTaGCATTTCTTTCTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCRAAPV*HFFLGL
Trigger: CAGACCGAGAAAGAAATGCCAGACGGGAGCCGCTCT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAGAGCGGCTCCCGTCTaGCATTTCTTTCTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKRAAPV*HFFLGL
Trigger: CAGACCGAGAAAGAAATGCCAGACGGGAGCCGCTCT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCAATCACAGTGCCAGTaGCAGTCAGCCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRQSQCQ*QSASLA
Trigger: TGCCAAGGAGGCTGACTGCCACTGGCACTGTGATTG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCCGGATCGCGATGGTGTaGTTCAACATCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLRIAMV*FNISCV
Trigger: CACACAGGAGATGTTGAACCACACCATCGCGATCCG...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACGTCAGGAAGCAGCCTaGAGATACATCCACCGACTC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPRQEAA*RYIHRL
Trigger: GAGTCGGTGGATGTATCTCCAGGCTGCTTCCTGACG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCAAACGCCTCCATTCTaGCAAGGGTTGCTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIQTPPF*QGLLAQ
Trigger: CTGCGCCAGCAACCCTTGCCAGAATGGAGGCGTTTG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGGCCCCCATAGAGGCATaGCTTGGAGGAACACGGATT +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRAPIEA*LGGTRI
Trigger: AATCCGTGTTCCTCCAAGCCATGCCTCTATGGGGGC...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATGGACACATACTGGTTaGGCGCAGCATCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPWTHTG*AQHPRS
Trigger: ACTGCGAGGATGCTGCGCCCAACCAGTATGTGTCCA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGTCGCACGATTCGGACTaGAAGGAGCTCAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRSHDSD*KELRDC
Trigger: GCAGTCTCTGAGCTCCTTCCAGTCCGAATCGTGCGA...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATCGCACGATTCGGACTaGAAGGAGCTCAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPSHDSD*KELRDC
Trigger: GCAGTCTCTGAGCTCCTTCCAGTCCGAATCGTGCGA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAAGGCGTACACAGACATaGGCATGCTCTCGACAGCGG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKRRTQT*ACSRQR
Trigger: CCGCTGTCGAGAGCATGCCCATGTCTGTGTACGCCT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATTGGGACACTGGAAATaGCTAGCACGTCCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKLGHWK*LARPEA
Trigger: CGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACGGTCCAGTCGATCTaGCGTCTCTATGACACCTGT +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKTVQSI*RLYDTC
Trigger: ACAGGTGTCATAGAGACGTCAGATCGACTGGACCGT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGACGGTCCAGTCGATCTaGCGTCTCTATGACACCTGT +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRTVQSI*RLYDTC
Trigger: ACAGGTGTCATAGAGACGTCAGATCGACTGGACCGT...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCAGAGGCACGACACCCTaGTCGGTTGCAAAGACTGTT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCRGTTP*SVAKTV
Trigger: AACAGTCTTTGCAACCGATCAGGGTGTCGTGCCTCT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGATCTCTATGAACGATaGAAGAGGCACGACACCCTG +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLDLYER*KRHDTL
Trigger: CAGGGTGTCGTGCCTCTTTCATCGTTCATAGAGATC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAAACGATAACTTCCGCTaGAAAGGCCGGGTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKNDNFR*KGRVPS
Trigger: GGAGGGAACCCGGCCTTTTCAGCGGAAGTTATCGTT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCTCACATCTTCTAGCGTaGGCACAATACTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLSHLLA*AQYWLG
Trigger: GCCAAGCCAGTATTGTGCTCACGCTAGAAGATGTGA...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACGGGCGCGTTGTCATTaGCATCGGACACATCGATGT +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKRARCH*HRTHRC
Trigger: ACATCGATGTGTCCGATGTCAATGACAACGCGCCCG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGAATTCTTCCGGAGTaGGGTTGGCAAAGCGGATCG +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIRILPE*GWQSGS
Trigger: CGATCCGCTTTGCCAACCTCACTCCGGAAGAATTCG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAAGTCAGTGTCATAGATaGACTCCCTGGGCACTGACC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPSQCHR*TPWALT
Trigger: GGTCAGTGCCCAGGGAGTTCATCTATGACACTGACT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGTTGGTTCCTATGTCTaGATCCGTGGCGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPVGSYV*IRGADS
Trigger: AGAGTCAGCGCCACGGATGCAGACATAGGAACCAAC...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACTGCAGGAGCTTCTCTaGCAGCATTTTGGCAACACC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPLQELL*QHFGNT
Trigger: GGTGTTGCCAAAATGCTGGCAGAGAAGCTCCTGCAG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTTCCAGAGCCGTCACCTaGAACACAACTGAGCCAACG +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPISRAVT*NTTEPT
Trigger: CGTTGGCTCAGTTGTGTTGCAGGTGACGGCTCTGGA...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCGTTCCAATTACAGATaGCTCAGACAGGGTCACCGC +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRRSNYR*LRQGHR
Trigger: GCGGTGACCCTGTCTGAGGCATCTGTAATTGGAACG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGTCAGGAGGACTCCTTaGGGGTTAACTTCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLVRRTP*GLTSKA
Trigger: GGCTTTTGAAGTTAACCCGCAAGGAGTCCTCCTGAC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATCAGCTTGCCCCCTGTaGTGGAAACAGAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPSACPL*WKQRTG
Trigger: ACCTGTTCTCTGTTTCCAGCACAGGGGGCAAGCTGA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGCCACTGCTTTTCGGTaGCCGTGCACAGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAATAFR*PCTDSG
Trigger: CCCCGAGTCTGTGCACGGGCACCGAAAAGCAGTGGC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAACGTCACGTGTCCGTTaGGCCCCAGGTCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKTSRVR*APGLYL
Trigger: CAGATAAAGACCTGGGGCCCAACGGACACGTGACGT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCATCACTGCTCAGCGTaGGCATACCACCATCAACTG +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCHHCSA*AYHHQL
Trigger: CAGTTGATGGTGGTATGCCCACGCTGAGCAGTGATG...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGGCCGTGAATCGTGGTaGACTATCGTTGACATCGGT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPGRESW*TIVDIG
Trigger: ACCGATGTCAACGATAGTCCACCACGATTCACGGCC...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACTCGGCCGTGAATCGTaGTGGACTATCGTTGACATC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPLGRES*WTIVDI
Trigger: GATGTCAACGATAGTCCACCACGATTCACGGCCGAG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACCGTGGTACTTAAGATaGCAATCACCCCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPPWYLR*QSPHLG
Trigger: CCCAAGGTGGGGTGATTGCCATCTTAAGTACCACGG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGTCATCTTCACAGCCATaGTGGACAGGTGGGCACCTT +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRSSSQP*WTGGHL
Trigger: AAGGTGCCCACCTGTCCACCATGGCTGTGAAGATGA...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATCCCAGCTAGGCTTCTaGATGGAGTCGCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPSQLGF*MESLSE
Trigger: TTCTGACAGCGACTCCATCCAGAAGCCTAGCTGGGA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATTGGGACACTGGAAATaGCTAGCACGTCCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKLGHWK*LARPEA
Trigger: CGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAA...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAACCAGTGATACCCTCTTaGTTTGCTGAGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKPVIPS*FAEVRS
Trigger: GCTCCTGACCTCAGCAAACCAAGAGGGTATCACTGG...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512772.5
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGACCGTGAGGTGTGCTaGAACAGCTTCATGATCCAG +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPDREVC*NSFMIQ
Trigger: CTGGATCATGAAGCTGTTCCAGCACACCTCACGGTC...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAGTAGTCCAGGTTTTCTaGCGTACTCACGGCACCAGT +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKVVQVF*RTHGTS
Trigger: ACTGGTGCCGTGAGTACGTCAGAAAACCTGGACTAC...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGCGGTATGTGAGCATTaGCAGAGTGAGAATCGAAGA +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLAVCEH*QSENRR
Trigger: TCTTCGATTCTCACTCTGTCAATGCTCACATACCGC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCCATCTGTGGCCCTaGCGAGAAGATGATAAACAG +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRLHLWP*REDDKQ
Trigger: CTGTTTATCATCTTCTCGTCAGGGCCACAGATGGAG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGTGAGCGTGTAACCTaGAATCGTTTCTCGGTCGAG +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIRERVT*NRFSVE
Trigger: CTCGACCGAGAAACGATTTCAGGTTACACGCTCACG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACGTGAGCGTGTAACCTaGAATCGTTTCTCGGTCGAG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKRERVT*NRFSVE
Trigger: CTCGACCGAGAAACGATTTCAGGTTACACGCTCACG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACAGAAGCTTGAACCGTaGGCGTGTAACCTGAAATCG +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPQKLEP*ACNLKS
Trigger: CGATTTCAGGTTACACGCTCACGGTTCAAGCTTCTG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCCCAATGACGCCACCTaGGTATTCTTCTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRPNDAT*VFFSRR
Trigger: TCTTCTGGAGAAGAATACTCAGGTGGCGTCATTGGG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAACGTCCAGATGTGGGTaGGGTTCAGAGGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKTSRCG*GSEDCK
Trigger: TTTGCAGTCCTCTGAACCTCACCCACATCTGGACGT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCGGCTGTGCTGTGTGTTaGCATCACACTTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCGCAVC*HHTFIH
Trigger: GTGGATGAAAGTGTGATGTCAACACACAGCACAGCC...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAGGCTGTGCTGTGTGTTaGCATCACACTTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKGCAVC*HHTFIH
Trigger: GTGGATGAAAGTGTGATGTCAACACACAGCACAGCC...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCTCTGATGTATCCCAGTaGTACCCATTGTCATCGCAC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLSDVSQ*YPLSSH
Trigger: GTGCGATGACAATGGGTATCACTGGGATACATCAGA...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCGCTTGGCATCCAATCTaGTGTATCCCAGTGATACCC +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCAWHPI*CIPVIP
Trigger: GGGTATCACTGGGATACATCAGATTGGATGCCAAGC...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGCTTGGCATCCAATCTaGTGTATCCCAGTGATACCC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPAWHPI*CIPVIP
Trigger: GGGTATCACTGGGATACATCAGATTGGATGCCAAGC...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTTGTATCCAGCACCTaGACCCTGACCTTTGTTCGC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPFVSST*TLTFVR
Trigger: GCGAACAAAGGTCAGGGTGCAGGTGCTGGATACAAA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAGACAACGTGGGCCACTaGAGAAGGCTTATGTTCCTC +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKDNVGH*RRLMFL
Trigger: GAGGAACATAAGCCTTCTGCAGTGGCCCACGTTGTC...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCCATGGTCATCTTGAGTaGACCTGGCCAGTATGGAAA +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLHGHLE*TWPVWK
Trigger: TTTCCATACTGGCCAGGTGCACTCAAGATGACCATG...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGGTCAGGAGGACTCCTTaGGGGTTAACTTCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRVRRTP*GLTSKA
Trigger: GGCTTTTGAAGTTAACCCGCAAGGAGTCCTCCTGAC...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGGTGACTTGTCTGATATaGACTGTGATGTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRVTCLI*TVMSAT
Trigger: GGTGGCCGACATCACAGTGCATATCAGACAAGTCAC...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAGTGCTGAATTCGGGATaGTCTGGGATAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKVLNSG*SGIADP
Trigger: AGGATCTGCTATCCCAGAGCATCCCGAATTCAGCAC...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCACACAGACATGGGCATaGTCTCGACAGCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSTQTWA*SRQRAP
Trigger: AGGCGCCCGCTGTCGAGAGCATGCCCATGTCTGTGT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGCTTGGAAGCACTGCTaGAAAGAACAGCGCGGATTA +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPAWKHC*KEQRGL
Trigger: TAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGC...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGAAAGCTTGGAAGCACTaGTGCAAAGAACAGCGCGGA +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRKAWKH*CKEQRG
Trigger: TCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTT...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACATGACCGTGAGGTGTaGTGGAACAGCTTCATGATC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPHDREV*WNSFMI
Trigger: GATCATGAAGCTGTTCCAGCACACCTCACGGTCATG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAACTGTTCTAAACTGCTaGAGAAGGTCACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPTVLNC*RRSPAT
Trigger: CGTGGCAGGTGACCTTCTCCAGCAGTTTAGAACAGT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCACTGTTCTAAACTGCTaGAGAAGGTCACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCTVLNC*RRSPAT
Trigger: CGTGGCAGGTGACCTTCTCCAGCAGTTTAGAACAGT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAACGGCACCAGTGAAATaGTCAATCGCAAACGGCACA +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPTAPVK*SIANGT
Trigger: TGTGCCGTTTGCGATTGACCATTTCACTGGTGCCGT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCTCTGGCTTGGTCCCTaGCCTCAATCTTTAAGGAGT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCLWLGP*PQSLRS
Trigger: ACTCCTTAAAGATTGAGGCCAGGGACCAAGCCAGAG...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGCTGGAAAACACGGGTaGGTGCAGGTTCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIAGKHG*VQVLIH
Trigger: GTGAATGAGAACCTGCACCCACCCGTGTTTTCCAGC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAATTTCTTTCTCGGTCTaGCTTTTCCCGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPISFSV*LFPLRE
Trigger: CTCCCTGAGCGGGAAAAGCCAGACCGAGAAAGAAAT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCAGGGTGTATACTGCCTaGAGTTCTCTGTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLRVYTA*SSLSKG
Trigger: ACCTTTGGACAGAGAACTCCAGGCAGTATACACCCT...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACAAAGCGGATCGCGATaGTGTGGTTCAACATCTCCT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPQSGSR*CGSTSP
Trigger: AGGAGATGTTGAACCACACCATCGCGATCCGCTTTG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCACCGCTGCCCTGTGGTaGCGGGGAGTCACAAAACTC +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSTAALW*RGVTKL
Trigger: GAGTTTTGTGACTCCCCGCCACCACAGGGCAGCGGT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGCGTGGACACATACTaGTTGGGCGCAGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAGVDTY*LGAASS
Trigger: CGAGGATGCTGCGCCCAACCAGTATGTGTCCACGCC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGTCACCTCTTCGAAGTaGCCGTCGTCCCCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAVTSSK*PSSPLS
Trigger: TGAGAGCGGGGACGACGGCCACTTCGAAGAGGTGAC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTTACTCACGGCACCAGTaGAATGGTCAATCGCAAACG +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIYSRHQ*NGQSQT
Trigger: CGTTTGCGATTGACCATTTCACTGGTGCCGTGAGTA...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAAGTTTACCAGCTTGTaGCTGGCAGCCACTGTTATG +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKKFTSL*LAATVM
Trigger: CATAACAGTGGCTGCCAGTCACAAGCTGGTAAACTT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAGATCTCTATGAACGATaGAAGAGGCACGACACCCTG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKDLYER*KRHDTL
Trigger: CAGGGTGTCGTGCCTCTTTCATCGTTCATAGAGATC...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCGATGTTGCCTTCGGTaGTGGAGTAAATCAACTGTG +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCRCCLR*WSKSTV
Trigger: CACAGTTGATTTACTCCATCACCGAAGGCAACATCG...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATTTGGTCTTCTACAATaGCCTTCACGACAACGTGGG +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKFGLLQ*PSRQRG
Trigger: CCCACGTTGTCGTGAAGGTCATTGTAGAAGACCAAA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCAAGGGTCTCCGTCTGTaGTGCTGTAGAACACTTTCA +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCKGLRL*CCRTLS
Trigger: TGAAAGTGTTCTACAGCATCACAGACGGAGACCCTT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACTGGAGTATTCCCTTTaGCCAGGCTGTAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPLEYSL*PGCKEQ
Trigger: CTGTTCTTTACAGCCTGGTCAAAGGGAATACTCCAG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTATCTCATGGTCATCTTaGGTGCACCTGGCCAGTATG +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIISWSS*VHLASM
Trigger: CATACTGGCCAGGTGCACTCAAGATGACCATGAGAT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCTCAGATGCCCTGATCTaGATTACTCTACTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCSDALI*ITLLPP
Trigger: AGGGGGAAGTAGAGTAATTCAGATCAGGGCATCTGA...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATATAGATCTCGGCCGTaGATCGTGGTGGACTATCGT +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKYRSRP*IVVDYR
Trigger: ACGATAGTCCACCACGATTCACGGCCGAGATCTATA...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCTCCTTGGCAAGCCTTaGTCCACAGCTTTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPILLGKP*STAFKE
Trigger: CTCTTTGAAAGCTGTGGATCAAGGCTTGCCAAGGAG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCGCGTGGAATATGTTCTaGGCCTCATGGTCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCAWNMF*ASWSVS
Trigger: TGAAACTGACCATGAGGCTCAGAACATATTCCACGC...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTTTCCTCGAGCATACATaGCAACCGCATGCGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIFLEHT*QPHAWN
Trigger: ATTCCACGCATGCGGTTGTCATGTATGCTCGAGGAA...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGTGCCCGATGCAGTATaGACTTGGTCTAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIVPDAV*TWSRTK
Trigger: CTTGGTTCTAGACCAAGTTCATACTGCATCGGGCAC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGCGTTTGGATCTGCTaGGTACAGGGGTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAGVWIC*VQGCLL
Trigger: GAGCAGACACCCCTGTACTCAGCAGATCCAAACGCC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCATTCAAACTGATTGCTaGATTCGGGCGGTAACGGTG +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCIQTDC*IRAVTV
Trigger: CACCGTTACCGCCCGAATTCAGCAATCAGTTTGAAT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATGGATGGATTCAAACTaGTTGCTGAATTCGGGCGGT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPWMDSN*LLNSGG
Trigger: ACCGCCCGAATTCAGCAATCAGTTTGAATCCATCCA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGTGCCTTTTGTTTaGGGTTCAGACATATCGAGG +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCPVPFV*GSDISR
Trigger: CCTCGATATGTCTGAACCTCAAACAAAAGGCACTGG...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCAAATGGCACAGCCGATaGAAACCTCACGATGACAGT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCKWHSR*KPHDDS
Trigger: ACTGTCATCGTGAGGTTTTCATCGGCTGTGCCATTT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCACATAAGTCTTAGCTaGAGAGTTCTCCTGCACGGT +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRHISLS*RVLLHG
Trigger: ACCGTGCAGGAGAACTCTGCAGCTAAGACTTATGTG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATGTCACAATTGCATATaGTGGGTCCCTGTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKCHNCI*WVPVQF
Trigger: GAACTGGACAGGGACCCAGCATATGCAATTGTGACA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATCCACTGTCACAATTaGATATGCTGGGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKIHCHN*ICWVPV
Trigger: GACAGGGACCCAGCATATGCAATTGTGACAGTGGAT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAACTGGACGATCCTAACTaGTCCACTGAGTTTATCCAC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKLDDPN*STEFIH
Trigger: GTGGATAAACTCAGTGGAGCAGTTAGGATCGTCCAG...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACAAACCAAAGGGGTATaGCAGGAGGCTCCACAGATA +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKQTKGV*QEAPQI
Trigger: TATCTGTGGAGCCTCCTGGCATACCCCTTTGGTTTG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCCATACCACCATCAACTaGCCTCACAAAAATCGTGTG +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLHTTIN*PHKNRV
Trigger: CACACGATTTTTGTGAGGGCAGTTGATGGTGGTATG...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGAAGGTGCCATCAGTTaGCGTGATAGTAAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLEGAIS*RDSKKV
Trigger: TACCTTCTTACTATCACGGCAACTGATGGCACCTTC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGTGACTTGTCTGATATaGACTGTGATGTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIVTCLI*TVMSAT
Trigger: GGTGGCCGACATCACAGTGCATATCAGACAAGTCAC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCCACTTCCAGGGCCACTaGGTGCCACTGCCCATCATT +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSHFQGH*VPLPII
Trigger: AATGATGGGCAGTGGCACGCAGTGGCCCTGGAAGTG...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGTGCTGAATTCGGGATaGTCTGGGATAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIVLNSG*SGIADP
Trigger: AGGATCTGCTATCCCAGAGCATCCCGAATTCAGCAC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGTCAGACTTCCGTGTaGTGCTGGGAATCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSSQTSV*CWESRG
Trigger: GCCCCTGGATTCCCAGCAGCACACGGAAGTCTGACT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAGGTTCTAAACAGGTATaGAGAAGGTCCCCGTTACAC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKGSKQV*RRSPLH
Trigger: GTGTAACGGGGACCTTCTGCATACCTGTTTAGAACC...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACCCGGCTTTGAACTGTaGAGAAGTCACGTGAATGAC +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKPGFEL*RSHVND
Trigger: GTCATTCACGTGACTTCTCCACAGTTCAAAGCCGGG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGGCTTTGTACGCTGTCTaGGTAAATTCAGGGGGATTG +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRALYAV*VNSGGL
Trigger: CAATCCCCCTGAATTTACCCAGACAGCGTACAAAGC...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTACGGCACCAGTGAAATaGTCAATCGCAAACGGCACA +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPITAPVK*SIANGT
Trigger: TGTGCCGTTTGCGATTGACCATTTCACTGGTGCCGT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACTCTGGCTTGGTCCCTaGCCTCAATCTTTAAGGAGT +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKLWLGP*PQSLRS
Trigger: ACTCCTTAAAGATTGAGGCCAGGGACCAAGCCAGAG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGCTGAGGCTCTTCTCTaGCTTGGTCCCTGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAAEALL*LGPWPQ
Trigger: TTGAGGCCAGGGACCAAGCCAGAGAAGAGCCTCAGC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGATGACGGTTCCTTCTaGAAGATCCTCTCGGACTTT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPDDGSF*KILSDF
Trigger: AAAGTCCGAGAGGATCTTCCAGAAGGAACCGTCATC...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCTTGCAATGGTTGATTTaGGGGGACTACCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLLQWLI*GDYHCL
Trigger: CAGACAATGGTAGTCCCCCCAAATCAACCATTGCAA...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCGTGAACCACGGGGCGTaGTCATTCGTGTCGCTGACA +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSVNHGA*SFVSLT
Trigger: TGTCAGCGACACGAATGACCACGCCCCGTGGTTCAC...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCATGTTTCGGCCTCGGTaGAATTCTCTTTCACTACCG +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCMFRPR*NSLSLP
Trigger: CGGTAGTGAAAGAGAATTCCACCGAGGCCGAAACAT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAGTTAAGACTGTAAAATaGCTTCAGGGCGTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKVKTVK*LQGVPV
Trigger: CACCGGCACGCCCTGAAGCCATTTTACAGTCTTAAC...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGAGCACAATACTGGCTTaGCAGAATCTTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRSTILA*QNLPPP
Trigger: TGGAGGAGGAAGATTCTGCCAAGCCAGTATTGTGCT...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGCGTGCCTCCATCAGTaGCCTCTACTGTTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIACLHQ*PLLLGN
Trigger: ATTACCTAACAGTAGAGGCCACTGATGGAGGCACGC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAACGCTTATCTCACAGTaGGTCCCTATGTACAAGGCA +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPTLISQ*VPMYKA
Trigger: TGCCTTGTACATAGGGACCCACTGTGAGATAAGCGT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTGGGGGAGGCAGGTTTaGCGCCACGCTGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSWGRQV*RHAADR
Trigger: GCGGTCTGCAGCGTGGCGCCAAACCTGCCTCCCCCA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTGGGGGAGGCAGGTTTaGCGCCACGCTGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRWGRQV*RHAADR
Trigger: GCGGTCTGCAGCGTGGCGCCAAACCTGCCTCCCCCA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCCAATCACCTCATAGTTaGGGAACTCTTGTATGTCCG +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLQSPHS*GTLVCP
Trigger: CGGACATACAAGAGTTCCCCAACTATGAGGTGATTG...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGAATCCCAAAAGACGTTaGGAAATGGCACAGCCGATG +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRNPKRR*EMAQPM
Trigger: CATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATT...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAAGTTCTCCTGCACGGTaGCGTTGTACTCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGASSPAR*RCTRGV
Trigger: CACACCTCGAGTACAACGTCACCGTGCAGGAGAACT...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTCACCATTGGCACCCTaGTCGCAGTCATCCACTGTC +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSSPLAP*SQSSTV
Trigger: GACAGTGGATGACTGCGATCAGGGTGCCAATGGTGA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTAAGTTTACCAGCTTGTaGCTGGCAGCCACTGTTATG +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIKFTSL*LAATVM
Trigger: CATAACAGTGGCTGCCAGTCACAAGCTGGTAAACTT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCGTCACGCTGTCAATTaGAAATGTGTCTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCRHAVN*KCVCVC
Trigger: ACAGACACAGACACATTTTCAATTGACAGCGTGACG...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTTTGGCCCTCACAGTaGGATTATACACTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRLWPSQ*DYTLAS
Trigger: AGAAGCAAGTGTATAATCTCACTGTGAGGGCCAAAG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCATTTCCAATATTTCCTaGCTCGATCGAGTACAGCAC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLISNIS*LDRVQH
Trigger: GTGCTGTACTCGATCGAGTCAGGAAATATTGGAAAT...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441802.7
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGTCCTCTATTTGGTTCTaGATCAGAATCGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRSSIWF*IRIGGS
Trigger: AGAGCCACCGATTCTGATTCAGAACCAAATAGAGGA...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACAACTTGTCTATGTCTaGACTGTCTGCATCATAGGC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPQLVYV*TVCIIG
Trigger: GCCTATGATGCAGACAGTTCAGACATAGACAAGTTG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAGACTTCCACACTTTGTaGCTGATCCAGGCTATACAT +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKDFHTL*LIQAIH
Trigger: ATGTATAGCCTGGATCAGTCACAAAGTGTGGAAGTC...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATGTAGGTGTCTTGGCTaGACACAGGGGTATTATCGT +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKCRCLG*TQGYYR
Trigger: ACGATAATACCCCTGTGTTCAGCCAAGACACCTACA...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCAAACCATTACCAACTTaGGGACTTCTTCCATGCCTT +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLKPLPT*GLLPCL
Trigger: AAGGCATGGAAGAAGTCCTCAAGTTGGTAATGGTTT...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGAGTCCATACAACCCCTaGAACCATTACCAACTTGAG +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRSPYNP*NHYQLE
Trigger: CTCAAGTTGGTAATGGTTTCAGGGGTTGTATGGACT...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCACCCTCTTGGTTTGCTaGGGTCAGGAGCAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSTLLVC*GQEQPK
Trigger: CTTTGGCTGCTCCTGACCTCAGCAAACCAAGAGGGT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512772.5
CDS-3UTR GCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCGAAACAGTGGTTATTTaGTCTCCCACGCCTAGATCT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCETVVI*SPTPRS
Trigger: AGATCTAGGCGTGGGAGAGCAAATAACCACTGTTTC...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATGTAATTTATTTGCCTaGAGGAGCTTCTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKCNLFA*RSFSAS
Trigger: GCTGGCAGAGAAGCTCCTGCAGGCAAATAAATTACA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCTGGACGATCCTAACTaGTCCACTGAGTTTATCCAC +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPILDDPN*STEFIH
Trigger: GTGGATAAACTCAGTGGAGCAGTTAGGATCGTCCAG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCACATCAAACGCCTCCTaGTGCTCACGATCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSTSNAS*CSRSKG
Trigger: GCCCTTCGATCGTGAGCAGCAGGAGGCGTTTGATGT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGCTGTGCACCTGGATaGTCTCTGCAATCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAGCAPG*SLQSLH
Trigger: GTGCAGAGATTGCAGAGAGCATCCAGGTGCACAGCC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTTCAGGGCGTGCCGGTaGAGGTTTGAGAGGGTGATA +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSFRACR*RFERVI
Trigger: TATCACCCTCTCAAACCTGCACCGGCACGCCCTGAA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCATTCAGGGCGTGCCGGTaGAGGTTTGAGAGGGTGATA +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAFRACR*RFERVI
Trigger: TATCACCCTCTCAAACCTGCACCGGCACGCCCTGAA...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAAGTCCCACTATGTTCTaGTCGGATGAGATCTATCTC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPSPTMF*SDEIYL
Trigger: GAGATAGATCTCATCCGAGCAGAACATAGTGGGACT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAAACTCAGTCTGGCTGTaGTGTGTGTTGACATCACAC +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKNSVWL*CVLTSH
Trigger: GTGTGATGTCAACACACAGCACAGCCAGACTGAGTT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGGCAGAGACACACCGCTaGCCTGTGGTGGCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLAETHR*PVVAGS
Trigger: ACTCCCCGCCACCACAGGGCAGCGGTGTGTCTCTGC...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCTACATGACAACCGCATaGGTGGAATATGTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCYMTTA*VEYVLS
Trigger: GCTCAGAACATATTCCACGCATGCGGTTGTCATGTA...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACAAGGCACTGCATTTaGAGTAATAACCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKTRHCI*SNNLQQ
Trigger: CTGCTGGAGGTTATTACTGCAAATGCAGTGCCTTGT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGTAGCGGGTCCCAGGTaGTTGTCTTTAGGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAVAGPR*LSLGSA
Trigger: GGCTGAACCTAAAGACAAGCACCTGGGACCCGCTAC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATCAAAATACGGTCTTTaGAAGAAAGCCGTAGCGGGT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPSKYGL*KKAVAG
Trigger: ACCCGCTACGGCTTTCTTGCAAAGACCGTATTTTGA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGGTTCTAAACAGGTATaGAGAAGGTCCCCGTTACAC +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIGSKQV*RRSPLH
Trigger: GTGTAACGGGGACCTTCTGCATACCTGTTTAGAACC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGCGACGGCGCTCTCGTaGAGCTCACCCGCCGTCTCA +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSATALS*SSPAVS
Trigger: TGAGACGGCGGGTGAGCTCCACGAGAGCGCCGTCGC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAAGTAAAATTCCCCGTTaGTTCCTATGTCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPSKIPR*FLCLHP
Trigger: CGGATGCAGACATAGGAACCAACGGGGAATTTTACT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCCCATCTCATAGAGCTTaGTCTCTAGGTAATCAAGTC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLPSHRA*SLGNQV
Trigger: GACTTGATTACCTAGAGACCAAGCTCTATGAGATGG...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACTTTCACCAAGACCTTaGTGGACGCTTTTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKLSPRP*WTLFCH
Trigger: GTGACAGAAAAGCGTCCACCAAGGTCTTGGTGAAAG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAACGTCACGTGTCCGTTaGGCCCCAGGTCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGATSRVR*APGLYL
Trigger: CAGATAAAGACCTGGGGCCCAACGGACACGTGACGT...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGAGAAGACAGAGAAACTaGCTTTCCCTTGTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRRRQRN*LSLVFG
Trigger: GCCAAAGACAAGGGAAAGCCAGTTTCTCTGTCTTCT...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCATCTCCCCATCTCTTCTaGCGTCCTCATCATGAGCCG +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGASPHLF*RPHHEP
Trigger: CGGCTCATGATGAGGACGCCAGAAGAGATGGGGAGA...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCATTAGAGCTCGAATCTaGATCAAATGCCTCGATCTG +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLIRARI*IKCLDL
Trigger: CAGATCGAGGCATTTGATCCAGATTCGAGCTCTAAT...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCTGCTGAAAACCTCTTaGACGAAACCACTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCLLKTS*TKPLQF
Trigger: AAACTGGAGTGGTTTCGTCCAAGAGGTTTTCAGCAG...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTTCTTGAGACTCAGTaGATCTCTACTGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPFLETQ*ISTALQ
Trigger: CTGCAGAGCAGTAGAGATCCACTGAGTCTCAAGAAA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATGCCTGCATAAAAACTaGCGCGTTGTCATTCTCATC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKCLHKN*RVVILI
Trigger: GATGAGAATGACAACGCGCCAGTTTTTATGCAGGCA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATGCCTGCATAAAAACTaGCGCGTTGTCATTCTCATC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPCLHKN*RVVILI
Trigger: GATGAGAATGACAACGCGCCAGTTTTTATGCAGGCA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCATCCACAATGGCTGTaGAGGATAGCTGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCHPQWL*RIAGSF
Trigger: AAAAGATCCAGCTATCCTCCACAGCCATTGTGGATG...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGCAATCACCCCACCTTaGGGGTCATCCTCACTCACA +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAAITPP*GSSSLT
Trigger: TGTGAGTGAGGATGACCCCCAAGGTGGGGTGATTGC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGTGAACGAGCTTCCTTaGTTGCCATCTATAATTGAG +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLVNELP*LPSIIE
Trigger: CTCAATTATAGATGGCAACCAAGGAAGCTCGTTCAC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCGACCAAACCTGCCGCTaGGACAGACACAGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSDQTCR*DRHRCV
Trigger: AACACACCTGTGTCTGTCCCAGCGGCAGGTTTGGTC...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCATGGACACATACTGGTTaGGCGCAGCATCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAWTHTG*AQHPRS
Trigger: ACTGCGAGGATGCTGCGCCCAACCAGTATGTGTCCA...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAAATAGTCCGTATCGATaGCGTTTGGATCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPNSPYR*RLDLLS
Trigger: ACTCAGCAGATCCAAACGCCATCGATACGGACTATT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAGAAGTCTTCTGGGGGTaGAGGAAAATCACTTTCGAT +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKEVFWG*RKITFD
Trigger: ATCGAAAGTGATTTTCCTCCACCCCCAGAAGACTTC...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCACACCACTGGTTGGGTaGATAGCAAACATATCTGTT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCTPLVG*IANISV
Trigger: AACAGATATGTTTGCTATTCACCCAACCAGTGGTGT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTTGGCTTCAACCTGGATaGTTTCACTATGTACCTCCT +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIWLQPG*FHYVPP
Trigger: AGGAGGTACATAGTGAAATCATCCAGGTTGAAGCCA...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATGTGTCTGTAACAATTaGGTACGTCACGTGTCCGTT +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKCVCNN*VRHVSV
Trigger: AACGGACACGTGACGTACTCAATTGTTACAGACACA...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACTTTGGCCCTCACAGTaGGATTATACACTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKLWPSQ*DYTLAS
Trigger: AGAAGCAAGTGTATAATCTCACTGTGAGGGCCAAAG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCACTTTGATGAATACCTaGGTGAGGATAGTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCTLMNT*VRIVVV
Trigger: AACCACCACTATCCTCACTCAGGTATTCATCAAAGT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCAATAGGCACGTCCTCTaGCACTGTAAAGGTATAGAA +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCNRHVL*HCKGIE
Trigger: TTCTATACCTTTACAGTGTCAGAGGACGTGCCTATT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGAATAGGCACGTCCTCTaGCACTGTAAAGGTATAGAA +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRNRHVL*HCKGIE
Trigger: TTCTATACCTTTACAGTGTCAGAGGACGTGCCTATT...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCGCCAGTATGGAAAACTaGTACCACTTAGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCASMEN*YHLVVS
Trigger: TGAGACAACTAAGTGGTATCAGTTTTCCATACTGGC...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGTCCACACTTTGTGACTaGTCCAGGCTATACATAACT +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRSTLCD*SRLYIT
Trigger: AGTTATGTATAGCCTGGATCAGTCACAAAGTGTGGA...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATCCACACTTTGTGACTaGTCCAGGCTATACATAACT +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKSTLCD*SRLYIT
Trigger: AGTTATGTATAGCCTGGATCAGTCACAAAGTGTGGA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTTGCTGCATACACTTaGAGAACTTCAGTTCCAACA +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRLAAYT*RTSVPT
Trigger: TGTTGGAACTGAAGTTCTTCAAGTGTATGCAGCAAG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGGTTGCCATCTATAATTaGGTAGTGGATGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRVAIYN*VVDVAV
Trigger: AACAGCCACATCCACTACTCAATTATAGATGGCAAC...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCAGAAGTTGTTTTGTTaGGATCTGAGCACTACCTGG +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIQKLFC*DLSTTW
Trigger: CCAGGTAGTGCTCAGATCTCAACAAAACAACTTCTG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGCCACTGCCCATCATTaGCCTGAATGCTCTGAACAG +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAATAHH*PECSEQ
Trigger: CTGTTCAGAGCATTCAGGTCAATGATGGGCAGTGGC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAAGTCCATACAACCCCTaGAACCATTACCAACTTGAG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKSPYNP*NHYQLE
Trigger: CTCAAGTTGGTAATGGTTTCAGGGGTTGTATGGACT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTGGAGGAACACGGATTaGCGCTTATCTCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSWRNTD*RLSHSG
Trigger: CCCACTGTGAGATAAGCGTCAATCCGTGTTCCTCCA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CAGGGTAATAGTCCGTATCGATGGCGTTTGGATCTGCTGAGTACAGGGGTGTCTGGCGTTTGGATCTGCTaGGTACAGGGGTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: QGNSPYRWRLDLLSTGVSGVWIC*VQGCLL
Trigger: GAGCAGACACCCCTGTACTCAGCAGATCCAAACGCC...AGACACCCCTGTACTCAGCAGATCCAAACGCCATCGATACGGACTATTACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR GCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGCGTCCGCATGGTACCTaGCGCACGAGCCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPRPHGT*RTSRSR
Trigger: GCGGGAGCGGCTCGTGCGGCAGGTACCATGCGGACG...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATCAAAATGGGCTGCCTaGTGTCTTTTAACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKSKWAA*CLLTGS
Trigger: AGAACCAGTTAAAAGACAGCAGGCAGCCCATTTTGA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCATCGATCCAGAGGGCGTaGGATGTTAACAACACCCGT +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGASIQRA*DVNNTR
Trigger: ACGGGTGTTGTTAACATCGCACGCCCTCTGGATCGA...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATCAATCTTTAAGGAGTaGTCATGCTGCAGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKSIFKE*SCCSSR
Trigger: TCGAGAGCTGCAGCATGAGCACTCCTTAAAGATTGA...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTTTCTCAAAGTCCAACTaGTGGACGATCCTAACTGCT +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIFSKSN*WTILTA
Trigger: AGCAGTTAGGATCGTCCAGCAGTTGGACTTTGAGAA...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCAATATGTGTTCATCTTaGTGTTCTCGGTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLNMCSS*CSRSSF
Trigger: GAAGCTAGACCGAGAACAGCAAGATGAACACATATT...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCTCAGTGGATCTCTACTaGTCTGCAGAGTGTAGATTA +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCSVDLY*SAECRL
Trigger: TAATCTACACTCTGCAGAGCAGTAGAGATCCACTGA...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATAGAGAGAGCCGGTTaGAGGATCAAGACGAAATTT +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKIERAG*RIKTKF
Trigger: AAATTTCGTCTTGATCCTGCAACCGGCTCTCTCTAT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACCTGTATATTCTGCCTaGATAAAAACTGGCGCGTTG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKPVYSA*IKTGAL
Trigger: CAACGCGCCAGTTTTTATGCAGGCAGAATATACAGG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGCACTTCCCCGTTTCTaGCACTGTCTCTGTCTACAG +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAALPRF*HCLCLQ
Trigger: CTGTAGACAGAGACAGTGGCAGAAACGGGGAAGTGC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAGCTCTCTGCAATCTCTaGACTGTAGAAAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKALCNL*TVERFF
Trigger: GAAAAACCTTTCTACAGTGCAGAGATTGCAGAGAGC...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTCCGGGCTGTTAGCCTaGACGTGGACCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLSGLLA*TWTTGL
Trigger: CAGCCCTGTGGTCCACGTGCAGGCTAACAGCCCGGA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAAGTCCCACTATGTTCTaGTCGGATGAGATCTATCTC +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKSPTMF*SDEIYL
Trigger: GAGATAGATCTCATCCGAGCAGAACATAGTGGGACT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGAGGACTCATCCCTATTaGTTTCTGGAGTATTCCCTT +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRRTHPY*FLEYSL
Trigger: AAGGGAATACTCCAGAAAGCAATAGGGATGAGTCCT...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCAATATCCCGACTTGCTaGATACACTTGAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLNIPTC*IHLKNF
Trigger: GAAGTTCTTCAAGTGTATGCAGCAAGTCGGGATATT...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTCTGTTACTACCAGCTaGAGCACGCTGAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSSVTTS*STLKPT
Trigger: AGTGGGCTTCAGCGTGCTGCAGCTGGTAGTAACAGA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTTCAAAATACGGTCTTTaGAAGAAAGCCGTAGCGGGT +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPISKYGL*KKAVAG
Trigger: ACCCGCTACGGCTTTCTTGCAAAGACCGTATTTTGA...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCGCTGCAGACCGCCACTaGTTTTCGGTGCCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLAADRH*FSVPVH
Trigger: GTGCACGGGCACCGAAAAGCAGTGGCGGTCTGCAGC...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGCTGCAGACCGCCACTaGTTTTCGGTGCCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGAADRH*FSVPVH
Trigger: GTGCACGGGCACCGAAAAGCAGTGGCGGTCTGCAGC...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATGCTCGCGCGTCCGCATaGTACCTGCCGCACGAGCCG +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADARASA*YLPHEP
Trigger: CGGCTCGTGCGGCAGGTACCATGCGGACGCGCGAGC...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACCATCTCATAGAGCTTaGTCTCTAGGTAATCAAGTC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPPSHRA*SLGNQV
Trigger: GACTTGATTACCTAGAGACCAAGCTCTATGAGATGG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGCTCTTCTCTGGCTTaGTCCCTGGCCTCAATCTTT +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAGSSLA*SLASIF
Trigger: AAAGATTGAGGCCAGGGACCAAGCCAGAGAAGAGCC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCCTAAATCAGGATCGTaGGCTTCTAACCACATGATG +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIPKSGS*ASNHMM
Trigger: CATCATGTGGTTAGAAGCCCACGATCCTGATTTAGG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCTCAAATGCCTCGATCTaGACCACAGATACATCTTTA +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLSNASI*TTDTSL
Trigger: TAAAGATGTATCTGTGGTCCAGATCGAGGCATTTGA...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATATTTCACTCATTGGTaGACTGCCCTTATCTGTAGC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPYFTHW*TALICS
Trigger: GCTACAGATAAGGGCAGTCCACCAATGAGTGAAATA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCAAGTTAATAGTGAACTaGCTGAAAGGGTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCKLIVN*LKGSPS
Trigger: AGACGGAGACCCTTTCAGCCAGTTCACTATTAACTT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAAAGTTAATAGTGAACTaGCTGAAAGGGTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPKLIVN*LKGSPS
Trigger: AGACGGAGACCCTTTCAGCCAGTTCACTATTAACTT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTAGGCTATACATAACTTaGCCGTTGGTTCCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIRLYIT*PLVPES
Trigger: TGACTCAGGAACCAACGGCCAAGTTATGTATAGCCT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAGTAAAGAAGAAGGGTaGACCGTTATGGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKSKEEG*TVMGRI
Trigger: GATTCTTCCCATAACGGTCCACCCTTCTTCTTTACT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTCTGGCAAGGGTTGCTaGCGCAGTCTTCCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGSGKGC*RSLPWP
Trigger: CGGCCACGGAAGACTGCGCCAGCAACCCTTGCCAGA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATTCATCTTTGCAGTATaGACTAAGCTGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKFIFAV*TKLTPL
Trigger: CAGAGGTGTCAGCTTAGTCCATACTGCAAAGATGAA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCCTCTAGAGGCTTCTTaGAAAGACAGGGATCAAGAT +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIPLEAS*KDRDQD
Trigger: ATCTTGATCCCTGTCTTTCCAAGAAGCCTCTAGAGG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCAGCCACTGTTATGTTaGTATATAATGGTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRQPLLC*YIMVWQ
Trigger: TTGCCACACCATTATATATCAACATAACAGTGGCTG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCCCAAACATCTGGTATaGGATTCCTCTATTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIPKHLV*DSSIWF
Trigger: GAACCAAATAGAGGAATCTCATACCAGATGTTTGGG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCAACTCCATCAGACACTaGCAGGTTAAGACTGTAAAA +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCNSIRH*QVKTVK
Trigger: TTTTACAGTCTTAACCTGTCAGTGTCTGATGGAGTT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGCCAGTATGGAAAACTaGTACCACTTAGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIASMEN*YHLVVS
Trigger: TGAGACAACTAAGTGGTATCAGTTTTCCATACTGGC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGGCAACGTCGCTCAGTaGAGGCGTGCCTCCATCAGT +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGGNVAQ*RRASIS
Trigger: ACTGATGGAGGCACGCCTTCACTGAGCGACGTTGCC...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCACCCAATGACGCCACCTaGGTATTCTTCTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAPNDAT*VFFSRR
Trigger: TCTTCTGGAGAAGAATACTCAGGTGGCGTCATTGGG...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCGTGCCCGATGCAGTATaGACTTGGTCTAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSVPDAV*TWSRTK
Trigger: CTTGGTTCTAGACCAAGTTCATACTGCATCGGGCAC...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAAAACCATTACCAACTTaGGGACTTCTTCCATGCCTT +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKKPLPT*GLLPCL
Trigger: AAGGCATGGAAGAAGTCCTCAAGTTGGTAATGGTTT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
53% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGAAATTGGGCAAATACTaGTTCAAGTTGAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRKLGKY*FKLNLC
Trigger: GCAGAGGTTCAACTTGAATCAGTATTTGCCCAATTT...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCATACATGAATCATGCTaGCAACACAGGACTGATTTT +
Preference number: 4 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLIHESC*QHRTDF
Trigger: AAAATCAGTCCTGTGTTGTCAGCATGATTCATGTAT...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAATGAAAAATTTGCCATaGTCATTCCCGTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPMKNLP*SFPSSM
Trigger: CATCGAAGACGGGAATGAGCATGGCAAATTTTTCAT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATTGACCACAATCCTTaGAAAGTTGCGTTTTACAGG +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKIDHNP*KVAFYR
Trigger: CCTGTAAAACGCAACTTTGCAAGGATTGTGGTCAAT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGTTCCCTCCATCTTTTaGAACCACTGTAACAAGATA +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPVPSIF*NHCNKI
Trigger: TATCTTGTTACAGTGGTTGCAAAAGATGGAGGGAAC...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAAGTCAGTTGCGCGTATaGTCAGCTTATATGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGASQLRV*SAYMPG
Trigger: ACCCGGCATATAAGCTGAGCATACGCGCAACTGACT...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGAAAATTTTGGAAGCTaGATTTCCGGTGGAAGGATT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPENFGS*ISGGRI
Trigger: AATCCTTCCACCGGAAATGCAGCTTCCAAAATTTTC...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATTCAATATCCCGACTTaGTGCATACACTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKFNIPT*CIHLKN
Trigger: GTTCTTCAAGTGTATGCAGCAAGTCGGGATATTGAA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGGCACTGACCAAACCTaGCGCTGGGACAGACACAGG +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSGTDQT*RWDRHR
Trigger: CCTGTGTCTGTCCCAGCGGCAGGTTTGGTCAGTGCC...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAGATGAATCTCCAAGATaGTATAGTCAGTTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKDESPR*YSQFLE
Trigger: CTCGAGGAACTGACTATAGCATCTTGGAGATTCATC...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTCCAGGGCCACTGCGTaGCACTGCCCATCATTGACC +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSSRATA*HCPSLT
Trigger: GGTCAATGATGGGCAGTGGCACGCAGTGGCCCTGGA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTCCAGGGCCACTGCGTaGCACTGCCCATCATTGACC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRSRATA*HCPSLT
Trigger: GGTCAATGATGGGCAGTGGCACGCAGTGGCCCTGGA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTCACAGAGGGCCCCGTaGAGGCAAGGGTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSSQRAP*RQGFPE
Trigger: CTCTGGAAACCCTTGCCTGCACGGGGCCCTCTGTGA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTGCCACTGCTTTTCGGTaGCCGTGCACAGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTATAFR*PCTDSG
Trigger: CCCCGAGTCTGTGCACGGGCACCGAAAAGCAGTGGC...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCTTCAAGTTGAACCTCTaGCGGTTTCTTGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCFKLNL*RFLDEE
Trigger: TTCTTCATCAAGAAACCGGCAGAGGTTCAACTTGAA...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATGCGACGGCGCTCTCGTaGAGCTCACCCGCCGTCTCA +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADATALS*SSPAVS
Trigger: TGAGACGGCGGGTGAGCTCCACGAGAGCGCCGTCGC...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGAAAGTTGGCCCGAAGTaGCGACGGCGCTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLKVGPK*RRRSRG
Trigger: TCCACGAGAGCGCCGTCGCCACTTCGGGCCAACTTT...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGTATCACACCACTGGTTaGGTGAATAGCAAACATATC +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRYHTTG*VNSKHI
Trigger: GATATGTTTGCTATTCACCCAACCAGTGGTGTGATA...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCATTTCTTTCTCGGTCTaGCTTTTCCCGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSISFSV*LFPLRE
Trigger: CTCCCTGAGCGGGAAAAGCCAGACCGAGAAAGAAAT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAAGTTATTTCACTCATTaGTGGACTGCCCTTATCTGT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPSYFTH*WTALIC
Trigger: ACAGATAAGGGCAGTCCACCAATGAGTGAAATAACT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACTGTTGTTCAAAGAGTaGTGGATTATCATTGAGGTC +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPLLFKE*WIIIEV
Trigger: GACCTCAATGATAATCCACCACTCTTTGAACAACAG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAAGTGGATGTGGCTGTTaGAAGGTCCATCGGCATCAT +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGASGCGC*KVHRHH
Trigger: ATGATGCCGATGGACCTTCCAACAGCCACATCCACT...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCACGTGTTGACTCTGGGTaGACTGCCATTATCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGARVDSG*TAIIRS
Trigger: GCTTCTGATAATGGCAGTCCACCCAGAGTCAACACG...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCACACCGCTGCCCTGTaGTGGCGGGGAGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGHTAAL*WRGVTK
Trigger: TTTTGTGACTCCCCGCCACCACAGGGCAGCGGTGTG...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATATAATCCTCTACACTaGCAAACAAAGCCTCCGTTG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKYNPLH*QTKPPL
Trigger: CAACGGAGGCTTTGTTTGCCAGTGTAGAGGATTATA...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGAATTCGGGCGGTAACGGTGGTAGCTCATCAGCTGCGGGGAAGTCTTCTGGGGAAGTCTTCTGGGGGTaGAGGAAAATCACTTTCGAT +
Preference number: 4 (lower is better)
Translates to: LNSGGNGGSSSAAGKSSGEVFWG*RKITFD
Trigger: ATCGAAAGTGATTTTCCTCCACCCCCAGAAGACTTC...CCCAGAAGACTTCCCCGCAGCTGATGAGCTACCACCGTTACCGCCCGAATTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR CCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCACTTCCGTGTGCTGCTaGGAATCCAGGGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLTSVCC*ESRGGI
Trigger: GATCCCGCCCCTGGATTCCCAGCAGCACACGGAAGT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
3UTR CAA 72 bp CGTAGCCTCCAGGGTAATAGTCCGTATCGATGGCGTTaGGATCTGCTGAGTACAGGGGTGTCTGCTCATCAA +
Preference number: 4 (lower is better)
Translates to: RSLQGNSPYRWR*DLLSTGVSAHQ
Trigger: TTGATGAGCAGACACCCCTGTACTCAGCAGATCCAAACGCCATCGATACGGACTATTACCCTGGAGGCTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCCTGGCGTCCTCATCATaGGCCGACACCGTCATTACC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLLASSS*ADTVIT
Trigger: GGTAATGACGGTGTCGGCTCATGATGAGGACGCCAG...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCTGGCGTCCTCATCATaGGCCGACACCGTCATTACC +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGLASSS*ADTVIT
Trigger: GGTAATGACGGTGTCGGCTCATGATGAGGACGCCAG...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAACAAGGATTTTCACAATaGCTCTTGCAATGGTTGATT +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKQGFSQ*LLQWLI
Trigger: AATCAACCATTGCAAGAGTCATTGTGAAAATCCTTG...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACAGTTTTCGGTTCGATaGAAAATTTGCCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKQFSVR*KICHAH
Trigger: ATGAGCATGGCAAATTTTTCATCGAACCGAAAACTG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCACCTGCAACACAACTaGGCCAACGGCTGCCGATTC +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLHLQHN*ANGCRF
Trigger: GAATCGGCAGCCGTTGGCTCAGTTGTGTTGCAGGTG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGAACAGAATATTCTTTTaGTGTAAACTTCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRNRIFF*CKLRRG
Trigger: GCCTCTCCGAAGTTTACATCAAAAGAATATTCTGTT...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCAACAGAATATTCTTTTaGTGTAAACTTCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCNRIFF*CKLRRG
Trigger: GCCTCTCCGAAGTTTACATCAAAAGAATATTCTGTT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAGGTATAGAAAGGTTCTaGAAATTTTGGAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKGIERF*KFWKLH
Trigger: ATGCAGCTTCCAAAATTTTCAGAACCTTTCTATACC...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGCGTGGAATATGTTCTaGGCCTCATGGTCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAAWNMF*ASWSVS
Trigger: TGAAACTGACCATGAGGCTCAGAACATATTCCACGC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCATCTGATGTATCCCAGTaGTACCCATTGTCATCGCAC +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGASDVSQ*YPLSSH
Trigger: GTGCGATGACAATGGGTATCACTGGGATACATCAGA...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGGGCGTTTGGATCTGCTaGGTACAGGGGTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRGVWIC*VQGCLL
Trigger: GAGCAGACACCCCTGTACTCAGCAGATCCAAACGCC...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp TGTATCCCAGTGATACCAGAGGCCCAATCAGCCATACAGCATGTCCTTACGCCAGGAAGTGGAGGAAAGTaGCTGCGGAATGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: CIPVIPEAQSAIQHVLTPGSGGK*LRNEEP
Trigger: TGGTTCCTCATTCCGCAGTCACTTTCCTCCACTTCC...TGGCGTAAGGACATGCTGTATGGCTGATTGGGCCTCTGGTATCACTGGGATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCACAAATGTCTCCCCATTaGTTAACTGTCGGGAATCGC +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAQMSPH*LTVGNR
Trigger: GCGATTCCCGACAGTTAAGCAATGGGGAGACATTTG...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTGTCACAATTGCATATaGTGGGTCCCTGTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSCHNCI*WVPVQF
Trigger: GAACTGGACAGGGACCCAGCATATGCAATTGTGACA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGTCACCTGCCACGATaGTTAAAGATGCTATGTCAC +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAGHLPR*LKMLCH
Trigger: GTGACATAGCATCTTTAAGCATCGTGGCAGGTGACC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCCGAATCTGGATCAAATaGCTCGATCTGGACCACAGA +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSRIWIK*LDLDHR
Trigger: TCTGTGGTCCAGATCGAGGCATTTGATCCAGATTCG...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAATGAAAAATTTGCCATaGTCATTCCCGTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKMKNLP*SFPSSM
Trigger: CATCGAAGACGGGAATGAGCATGGCAAATTTTTCAT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTCAAACGCCTCCTGCTaGTCACGATCGAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLSNASC*SRSKGV
Trigger: CACGCCCTTCGATCGTGAGCAGCAGGAGGCGTTTGA...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCCGTCAAGGAGTCAGTTaGGCGTATGCTCAGCTTATA +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSRQGVS*AYAQLI
Trigger: TATAAGCTGAGCATACGCGCAACTGACTCCTTGACG...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGAAAATTTTGGAAGCTaGATTTCCGGTGGAAGGATT +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIENFGS*ISGGRI
Trigger: AATCCTTCCACCGGAAATGCAGCTTCCAAAATTTTC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATGGACTGTTGTCATTTaGATCCAGAACTTTCACTTC +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKWTVVI*IQNFHF
Trigger: GAAGTGAAAGTTCTGGATGCAAATGACAACAGTCCA...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATCTGTAGCAGAGATCTaGATGATCAATTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKSVAEI*MINFPG
Trigger: TCCTGGAAAATTGATCATGCAGATCTCTGCTACAGA...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTAATATCCCGACTTGCTaGATACACTTGAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPINIPTC*IHLKNF
Trigger: GAAGTTCTTCAAGTGTATGCAGCAAGTCGGGATATT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGCTCAGTGAAGGCGTaGCTCCATCAGTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRRSVKA*LHQWPL
Trigger: TAGAGGCCACTGATGGAGGCACGCCTTCACTGAGCG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAACCGTGATGACAGACTaGTCAAGAACGGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGATVMTD*SRTASS
Trigger: TGAAGATGCCGTTCTTGAGCAGTCTGTCATCACGGT...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGACATTGAGAAGGTATTaGCCTATGTCTAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRTLRRY*PMSSFL
Trigger: CAAAAAGCTAGACATAGGGCAATACCTTCTCAATGT...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATGCAGAGACACACCGCTaGCCTGTGGTGGCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADAETHR*PVVAGS
Trigger: ACTCCCCGCCACCACAGGGCAGCGGTGTGTCTCTGC...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAAAGTTTCCTTCTCCGTaGTCCAGAAGGCTGTATCTC +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAKFPSP*SRRLYL
Trigger: GAGATACAGCCTTCTGGACCACGGAGAAGGAAACTT...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAAGTTTCCTTCTCCGTaGTCCAGAAGGCTGTATCTC +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSKFPSP*SRRLYL
Trigger: GAGATACAGCCTTCTGGACCACGGAGAAGGAAACTT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATTCAATATGGAGTCTaGTGGTTGATGACTTTTGAG +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKIQYGV*WLMTFE
Trigger: CTCAAAAGTCATCAACCACCAGACTCCATATTGAAT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTAATGAATGCCTCATATaGACTAGATTCAAAGACCGG +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPINECLI*TRFKDR
Trigger: CCGGTCTTTGAATCTAGTCCATATGAGGCATTCATT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGGCAGTCAGCCTCCTTaGCAAGCCTTGATCCACAGC +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGGSQPP*QALIHS
Trigger: GCTGTGGATCAAGGCTTGCCAAGGAGGCTGACTGCC...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGCCATGGTGGACAGGTaGGCACCTTCCCTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSAMVDR*APSLFA
Trigger: TGCAAAGAGGGAAGGTGCCCACCTGTCCACCATGGC...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTCTTCACAGCCATGGTaGACAGGTGGGCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRSSQPW*TGGHLP
Trigger: GGGAAGGTGCCCACCTGTCCACCATGGCTGTGAAGA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCAAACGCCTCCATTCTaGCAAGGGTTGCTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLQTPPF*QGLLAQ
Trigger: CTGCGCCAGCAACCCTTGCCAGAATGGAGGCGTTTG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGAATTCGGGATGCTCTaGGATAGCAGATCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAEFGML*DSRSFE
Trigger: TTCGAAGGATCTGCTATCCCAGAGCATCCCGAATTC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCGTGTCTTTGATACCCTaGCGGGTAAGGGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLVSLIP*RVRGMG
Trigger: CCCCATGCCCCTTACCCGCCAGGGTATCAAAGACAC...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTCAGAGCAGGAGGCGGTaGAGGCGTACACAGACATGG +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTQSRRR*RRTQTW
Trigger: CCATGTCTGTGTACGCCTCCACCGCCTCCTGCTCTG...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACAGAGCAGGAGGCGGTaGAGGCGTACACAGACATGG +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSQSRRR*RRTQTW
Trigger: CCATGTCTGTGTACGCCTCCACCGCCTCCTGCTCTG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTACTTCCGTGTGCTGCTaGGAATCCAGGGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTTSVCC*ESRGGI
Trigger: GATCCCGCCCCTGGATTCCCAGCAGCACACGGAAGT...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAACTTCCGTGTGCTGCTaGGAATCCAGGGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSTSVCC*ESRGGI
Trigger: GATCCCGCCCCTGGATTCCCAGCAGCACACGGAAGT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAAATCCCAAAAGACGTTaGGAAATGGCACAGCCGATG +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGANPKRR*EMAQPM
Trigger: CATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATT...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCATGGCTTCAACCTGGATaGTTTCACTATGTACCTCCT +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAWLQPG*FHYVPP
Trigger: AGGAGGTACATAGTGAAATCATCCAGGTTGAAGCCA...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCACGTCACGCTGTCAATTaGAAATGTGTCTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGARHAVN*KCVCVC
Trigger: ACAGACACAGACACATTTTCAATTGACAGCGTGACG...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGACAGTGGAGAACAGCTaGGGCTCTTCTCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLTVENS*GSSLAW
Trigger: CCAAGCCAGAGAAGAGCCTCAGCTGTTCTCCACTGT...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTCACCTGCAACACAACTaGGCCAACGGCTGCCGATTC +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTHLQHN*ANGCRF
Trigger: GAATCGGCAGCCGTTGGCTCAGTTGTGTTGCAGGTG...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCACGTTGTCAGCAATTGTaGCAAAGATACGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGARCQQL*QRYAQK
Trigger: CTTCTGTGCGTATCTTTGTCACAATTGCTGACAACG...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCAACGATAACTTCCGCTaGAAAGGCCGGGTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLNDNFR*KGRVPS
Trigger: GGAGGGAACCCGGCCTTTTCAGCGGAAGTTATCGTT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTCCTCTATTTGGTTCTaGATCAGAATCGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSSSIWF*IRIGGS
Trigger: AGAGCCACCGATTCTGATTCAGAACCAAATAGAGGA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCCAACTTGTCTATGTCTaGACTGTCTGCATCATAGGC +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSQLVYV*TVCIIG
Trigger: GCCTATGATGCAGACAGTTCAGACATAGACAAGTTG...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGTGCCGGTGCAGGTTTaGGAGGGTGATAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSVPVQV*EGDNPC
Trigger: ACAGGGATTATCACCCTCTCAAACCTGCACCGGCAC...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGGTGCCGGTGCAGGTTTaGGAGGGTGATAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRVPVQV*EGDNPC
Trigger: ACAGGGATTATCACCCTCTCAAACCTGCACCGGCAC...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTTGTCTGGATTTAGTTTaGATTTTTCTGCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPICLDLV*IFLHLN
Trigger: GTTCAGGTGCAGAAAAATTCAAACTAAATCCAGACA...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCATCACGGTCGTCGTGTTaGCTCTGGGTGGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSSRSSC*LWVDCH
Trigger: ATGGCAGTCCACCCAGAGTCAACACGACGACCGTGA...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTGCCTTGTTCCCTGCTaGCGGATGTGGCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSCLVPC*RMWPPK
Trigger: TTTTGGTGGCCACATCCGTCAGCAGGGAACAAGGCA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGATAACCTCCAGCAGGTaGCGGATTGCAAACGCCTCC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRITSSR*RIANAS
Trigger: GGAGGCGTTTGCAATCCGTCACCTGCTGGAGGTTAT...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGTTTGGATCTGCTaGGTACAGGGGTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSGVWIC*VQGCLL
Trigger: GAGCAGACACCCCTGTACTCAGCAGATCCAAACGCC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp ATCCCAGTGATACCAGAGGCCCAATCAGCCATACAGCATGTCCTTACGCCAGTATCTGATGTATCCCAGTaGTACCAGAGGCCCAATCAG +
Preference number: 4 (lower is better)
Translates to: IPVIPEAQSAIQHVLTPVSDVSQ*YQRPNQ
Trigger: CTGATTGGGCCTCTGGTATCACTGGGATACATCAGA...TACTGGCGTAAGGACATGCTGTATGGCTGATTGGGCCTCTGGTATCACTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR GCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTCCCATACAACTTCATaGCACGGTCCGCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSSHTTS*HGPQRG
Trigger: TCCTCGCTGCGGACCGTGGCATGAAGTTGTATGGGA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCAAGGAGTGCTCATGCTaGAGCTCTCGATCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLKECSC*SSRSRG
Trigger: CCCTCTGGATCGAGAGCTGCAGCATGAGCACTCCTT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCACCTGTATATTCTGCCTaGATAAAAACTGGCGCGTTG +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAPVYSA*IKTGAL
Trigger: CAACGCGCCAGTTTTTATGCAGGCAGAATATACAGG...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCACGATCGAAGGGCGTaGCAGTGGTTGACAGAACTC +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLHDRRA*QWLTEL
Trigger: GAGTTCTGTCAACCACTGGCACGCCCTTCGATCGTG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCATCAAACGCCTCCTGCTaGTCACGATCGAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSSNASC*SRSKGV
Trigger: CACGCCCTTCGATCGTGAGCAGCAGGAGGCGTTTGA...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTCCGGGCTGTTAGCCTaGACGTGGACCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADSGLLA*TWTTGL
Trigger: CAGCCCTGTGGTCCACGTGCAGGCTAACAGCCCGGA...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTAATGATCATGACTCTTaGTGTGATTCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPINDHDS*CDSQTS
Trigger: AGATGTTTGGGAATCACAGCAAGAGTCATGATCATT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCACATACCACCATCAACTaGCCTCACAAAAATCGTGTG +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAHTTIN*PHKNRV
Trigger: CACACGATTTTTGTGAGGGCAGTTGATGGTGGTATG...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTCGGCATCTGTGGCCTaGACTCTTGTCAGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLSASVA*TLVSSV
Trigger: AACGCTGCTGACAAGAGTGCAGGCCACAGATGCCGA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTCGTTAATGGAGAACTaGCCATCAGCAGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSSLMEN*PSAESI
Trigger: GATTGACTCTGCTGATGGGCAGTTCTCCATTAACGA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAGAAGAGTTAATCTTGTaGAGAAGTTGTTTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKEELIL*RSCFVE
Trigger: CTCAACAAAACAACTTCTGCACAAGATTAACTCTTC...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGGAGTCCCTGGGGCTGTaGCCGATGCAGTATGAACTT +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRESLGL*PMQYEL
Trigger: AAGTTCATACTGCATCGGGCACAGCCCCAGGGACTC...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCCAGCAGGTGACGGATTaGAAACGCCTCCATTCTGGC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLQQVTD*KRLHSG
Trigger: GCCAGAATGGAGGCGTTTGCAATCCGTCACCTGCTG...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCCCTGTACTCGTGGCTaGAGTTGCAGTGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLPCTRG*SCSDRS
Trigger: GCTCCTATCACTGCAACTGCAGCCACGAGTACAGGG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGGTAGCGGGTCCCAGGTaGTTGTCTTTAGGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRVAGPR*LSLGSA
Trigger: GGCTGAACCTAAAGACAAGCACCTGGGACCCGCTAC...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATGCTGCAGACCGCCACTaGTTTTCGGTGCCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADAADRH*FSVPVH
Trigger: GTGCACGGGCACCGAAAAGCAGTGGCGGTCTGCAGC...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAAGTCAGACTTCCGTGTaGTGCTGGGAATCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSSQTSV*CWESRG
Trigger: GCCCCTGGATTCCCAGCAGCACACGGAAGTCTGACT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGGATCCAGCGCAGCCATaGCCATTCGGCTCACCAAAA +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLDPAQP*PFGSPK
Trigger: TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATC...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATCGGGAATCGCAAAGTTaGCCCGAAGTGGCGACGGCG +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADRESQS*PEVATA
Trigger: CGCCGTCGCCACTTCGGGCCAACTTTGCGATTCCCG...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGCGGGAATCGCAAAGTTaGCCCGAAGTGGCGACGGCG +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPRESQS*PEVATA
Trigger: CGCCGTCGCCACTTCGGGCCAACTTTGCGATTCCCG...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTCCGGAGCACATTCATTaGCCTGTTCGATGTGCACCG +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSPEHIH*PVRCAP
Trigger: CGGTGCACATCGAACAGGCCAATGAATGTGCTCCGG...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTTTCTTGAGACTCAGTaGATCTCTACTGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSFLETQ*ISTALQ
Trigger: CTGCAGAGCAGTAGAGATCCACTGAGTCTCAAGAAA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATTTAAATCTGCGATCTaGGTTGAGGATGTGATAAAA +
Preference number: 4 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKFKSAI*VEDVIK
Trigger: TTTTATCACATCCTCAACCCAGATCGCAGATTTAAA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAAGGCTATACATAACTTaGCCGTTGGTTCCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGARLYIT*PLVPES
Trigger: TGACTCAGGAACCAACGGCCAAGTTATGTATAGCCT...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGCAATCACCCCACCTTaGGGGTCATCCTCACTCACA +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSAITPP*GSSSLT
Trigger: TGTGAGTGAGGATGACCCCCAAGGTGGGGTGATTGC...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTAGTCTTTTCACAAACTaGACTGTTGTCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: LEMASTSRGAGSSAAMPISLFTN*TVVICI
Trigger: GATGCAAATGACAACAGTCCAGTTTGTGAAAAGACT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTCTGCGTCGGCATCTGTaGCCTGCACTCTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTLRRHL*PALLSA
Trigger: TGCTGACAAGAGTGCAGGCCACAGATGCCGACGCAG...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCACTGTAGTTTCCCCTaGAGAAGACGGGCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGHCSFP*RRRARC
Trigger: ACAACGCGCCCGTCTTCTCCAGGGGAAACTACAGTG...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTGTAGTTTCCCCTaGAGAAGACGGGCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRHCSFP*RRRARC
Trigger: ACAACGCGCCCGTCTTCTCCAGGGGAAACTACAGTG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGCCATGGTGGACAGGTaGGCACCTTCCCTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSAMVDR*APSLFA
Trigger: TGCAAAGAGGGAAGGTGCCCACCTGTCCACCATGGC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCATCTTCACAGCCATGGTaGACAGGTGGGCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSSSQPW*TGGHLP
Trigger: GGGAAGGTGCCCACCTGTCCACCATGGCTGTGAAGA...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGGACCAAACCTGCCGCTaGGACAGACACAGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLDQTCR*DRHRCV
Trigger: AACACACCTGTGTCTGTCCCAGCGGCAGGTTTGGTC...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCCGTCAGGAAGCAGCCTaGAGATACATCCACCGACTC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLRQEAA*RYIHRL
Trigger: GAGTCGGTGGATGTATCTCCAGGCTGCTTCCTGACG...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCGCCCCCATAGAGGCATaGCTTGGAGGAACACGGATT +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLAPIEA*LGGTRI
Trigger: AATCCGTGTTCCTCCAAGCCATGCCTCTATGGGGGC...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCAATGTTCCACGGCGTaGACACATACTGGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLQCSTA*THTGWA
Trigger: CGCCCAACCAGTATGTGTCCACGCCGTGGAACATTG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GTGGAGGAAAATCACTTTCGATGTCGTAGCCTCCAGGGTAATAGTCCGTATCGATCGCACGATTCGGACTaGAAGGAGCTCAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: VEENHFRCRSLQGNSPYRSHDSD*KELRDC
Trigger: GCAGTCTCTGAGCTCCTTCCAGTCCGAATCGTGCGA...TCGATACGGACTATTACCCTGGAGGCTACGACATCGAAAGTGATTTTCCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTCGCACGATTCGGACTaGAAGGAGCTCAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRSHDSD*KELRDC
Trigger: GCAGTCTCTGAGCTCCTTCCAGTCCGAATCGTGCGA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCCAATCACCTCATAGTTaGGGAACTCTTGTATGTCCG +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSQSPHS*GTLVCP
Trigger: CGGACATACAAGAGTTCCCCAACTATGAGGTGATTG...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCGAAGTCTTCTGGGGGTaGAGGAAAATCACTTTCGAT +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSEVFWG*RKITFD
Trigger: ATCGAAAGTGATTTTCCTCCACCCCCAGAAGACTTC...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCGTCAGTAAGAAAGACTaGCTAATGGTAGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCVSKKD*LMVVFI
Trigger: AATGAAAACTACCATTAGCCAGTCTTTCTTACTGAC...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGTCAGTAAGAAAGACTaGCTAATGGTAGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPVSKKD*LMVVFI
Trigger: AATGAAAACTACCATTAGCCAGTCTTTCTTACTGAC...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGCTGCATCCGTGGCGCTaGCTCTTGCGATACTGGTCC +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPLHPWR*LLRYWS
Trigger: GGACCAGTATCGCAAGAGTCAGCGCCACGGATGCAG...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAACACCACTGGTTGGGTaGATAGCAAACATATCTGTT +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGATPLVG*IANISV
Trigger: AACAGATATGTTTGCTATTCACCCAACCAGTGGTGT...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTGTGGAGAAGTCACGTaGATGACTTTAACAGAAGAG +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSCGEVT*MTLTEE
Trigger: CTCTTCTGTTAAAGTCATTCACGTGACTTCTCCACA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGAATGGCCTTTACCATaGCCACAGGTGTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSEWPLP*PQVCWE
Trigger: CTCCCAACACACCTGTGGTCATGGTAAAGGCCATTC...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCCTATGTAGATCTCTATaGACGATGAAAGAGGCACGA +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSLCRSL*TMKEAR
Trigger: TCGTGCCTCTTTCATCGTTCATAGAGATCTACATAG...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCCTTGCTGCATACACTTaGAGAACTTCAGTTCCAACA +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSLAAYT*RTSVPT
Trigger: TGTTGGAACTGAAGTTCTTCAAGTGTATGCAGCAAG...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACGAATTCTTCCGGAGTaGGGTTGGCAAAGCGGATCG +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSRILPE*GWQSGS
Trigger: CGATCCGCTTTGCCAACCTCACTCCGGAAGAATTCG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCACGTCCAGATGTGGGTaGGGTTCAGAGGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLTSRCG*GSEDCK
Trigger: TTTGCAGTCCTCTGAACCTCACCCACATCTGGACGT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCAGTCAGTGTCATAGATaGACTCCCTGGGCACTGACC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLSQCHR*TPWALT
Trigger: GGTCAGTGCCCAGGGAGTTCATCTATGACACTGACT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGGAGGAACACGGATTaGCGCTTATCTCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLWRNTD*RLSHSG
Trigger: CCCACTGTGAGATAAGCGTCAATCCGTGTTCCTCCA...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTCTTTAGGTTCAGCCTaGTGCTTCTTTTTCCGACTA +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSSLGSA*CFFFRL
Trigger: TAGTCGGAAAAAGAAGCATCAGGCTGAACCTAAAGA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCCATAGTCACTCATCATaGCCTCGGACTCCACTTCGC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLHSHSS*PRTPLR
Trigger: GCGAAGTGGAGTCCGAGGTCATGATGAGTGACTATG...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCGTGGCGCTGACTCTTaGGATACTGGTCCTTATAGC +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGRGADS*DTGPYS
Trigger: GCTATAAGGACCAGTATCGCAAGAGTCAGCGCCACG...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTTGGCCTGTTCGATGTaGACCGTTAGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRLACSM*TVSLAM
Trigger: CATGGCCAAGCTAACGGTGCACATCGAACAGGCCAA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAAGTTCAAAATGGGCTaGCTGCTGTCTTTTAACTGG +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSKFKMG*LLSFNW
Trigger: CCAGTTAAAAGACAGCAGGCAGCCCATTTTGAACTT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTAAGGAGTGCTCATGCTaGAGCTCTCGATCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTKECSC*SSRSRG
Trigger: CCCTCTGGATCGAGAGCTGCAGCATGAGCACTCCTT...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAACATCAAACGCCTCCTaGTGCTCACGATCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSTSNAS*CSRSKG
Trigger: GCCCTTCGATCGTGAGCAGCAGGAGGCGTTTGATGT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCGCACTTCCCCGTTTCTaGCACTGTCTCTGTCTACAG +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLALPRF*HCLCLQ
Trigger: CTGTAGACAGAGACAGTGGCAGAAACGGGGAAGTGC...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTCGTTCCAATTACAGATaGCTCAGACAGGGTCACCGC +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSRSNYR*LRQGHR
Trigger: GCGGTGACCCTGTCTGAGGCATCTGTAATTGGAACG...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCGGTGATTTCTGCATTTaGTTCAATATCCCGACTTGC +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSGDFCI*FNIPTC
Trigger: GCAAGTCGGGATATTGAAGCAAATGCAGAAATCACC...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCAAGCTCGCTGGAAGTTaGGCCAGTAGTCACCAACGA +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGKLAGS*ASSHQR
Trigger: TCGTTGGTGACTACTGGCGCAACTTCCAGCGAGCTT...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAGAAGAGTTAATCTTGTaGAGAAGTTGTTTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKEELIL*RSCFVE
Trigger: CTCAACAAAACAACTTCTGCACAAGATTAACTCTTC...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGGGCACTGACCAAACCTaGCGCTGGGACAGACACAGG +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPGTDQT*RWDRHR
Trigger: CCTGTGTCTGTCCCAGCGGCAGGTTTGGTCAGTGCC...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGGCTTTTCGGTGCCCGTaGACAGACTCGGGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRAFRCP*TDSGLK
Trigger: TTTTAACCCCGAGTCTGTGCACGGGCACCGAAAAGC...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCGCCACTGCTTTTCGGTaGCCGTGCACAGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPATAFR*PCTDSG
Trigger: CCCCGAGTCTGTGCACGGGCACCGAAAAGCAGTGGC...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGACACAGACATGGGCATaGTCTCGACAGCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPTQTWA*SRQRAP
Trigger: AGGCGCCCGCTGTCGAGAGCATGCCCATGTCTGTGT...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACCTTTACAAGACCATTaGATCACAAATATACAGACA +
Preference number: 4 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKPLQDH*ITNIQT
Trigger: TGTCTGTATATTTGTGATGCAATGGTCTTGTAAAGG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTTAACAGAAGAGAACTaGGGCGGAGTTCCTTTATCT +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSLTEEN*GGVPLS
Trigger: AGATAAAGGAACTCCGCCCCAGTTCTCTTCTGTTAA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTCTGTGGCTTCAACCTaGATGATTTCACTATGTACC +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSSVAST*MISLCT
Trigger: GGTACATAGTGAAATCATCCAGGTTGAAGCCACAGA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGGCTCCAGGGACGGTTTaGGCTTGGAGATCCATTCAA +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLAPGTV*AWRSIQ
Trigger: TTGAATGGATCTCCAAGCCCAAACCGTCCCTGGAGC...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACGAAGGGCGTGCCAGTaGTTGACAGAACTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSRRACQ*LTELLK
Trigger: CTTCAGGAGTTCTGTCAACCACTGGCACGCCCTTCG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTACCTTCACGACAACGTaGGCCACTGCAGAAGGCTTA +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSTFTTT*ATAEGL
Trigger: TAAGCCTTCTGCAGTGGCCCACGTTGTCGTGAAGGT...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACCTTCACGACAACGTaGGCCACTGCAGAAGGCTTA +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGTFTTT*ATAEGL
Trigger: TAAGCCTTCTGCAGTGGCCCACGTTGTCGTGAAGGT...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGACAGGGCTGTGCACCTaGATGCTCTCTGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRTGLCT*MLSAIS
Trigger: AGAGATTGCAGAGAGCATCCAGGTGCACAGCCCTGT...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCCATCACTGCTCAGCGTaGGCATACCACCATCAACTG +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLHHCSA*AYHHQL
Trigger: CAGTTGATGGTGGTATGCCCACGCTGAGCAGTGATG...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTGGCGCAGTCTTCCGTaGCCGTCAGGAAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPWRSLP*PSGSSL
Trigger: CAGGCTGCTTCCTGACGGCCACGGAAGACTGCGCCA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTCCCAGCTAGGCTTCTaGATGGAGTCGCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRSQLGF*MESLSE
Trigger: TTCTGACAGCGACTCCATCCAGAAGCCTAGCTGGGA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTCCCGGGCACTGTATaGCTGGGAAGGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTFPGTV*LGRLFL
Trigger: GAGGAAAAGCCTTCCCAGCCATACAGTGCCCGGGAA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAATCGCAAACGGCACATaGTTTAAATTTGCGATACTG +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAIANGT*FKFAIL
Trigger: CAGTATCGCAAATTTAAATCATGTGCCGTTTGCGAT...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGCGGCAAGCCCCAGTCTaGTGCACGAATCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPRQAPV*CTNPQS
Trigger: ACTCTGAGGATTCGTGCATCAGACTGGGGCTTGCCG...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCACAGCCACTGTTATGTTaGTATATAATGGTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAQPLLC*YIMVWQ
Trigger: TTGCCACACCATTATATATCAACATAACAGTGGCTG...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCATGGATCTTTTCACCATaGTCTGATGCAACCACTTTA +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAWIFSP*SDATTL
Trigger: TAAAGTGGTTGCATCAGATCATGGTGAAAAGATCCA...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTATAGATCTCGGCCGTaGATCGTGGTGGACTATCGT +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLYRSRP*IVVDYR
Trigger: ACGATAGTCCACCACGATTCACGGCCGAGATCTATA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTCACATCTTCTAGCGTaGGCACAATACTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGSHLLA*AQYWLG
Trigger: GCCAAGCCAGTATTGTGCTCACGCTAGAAGATGTGA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCTCCTTGGCAAGCCTTaGTCCACAGCTTTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGLLGKP*STAFKE
Trigger: CTCTTTGAAAGCTGTGGATCAAGGCTTGCCAAGGAG...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTCACGGTCGTCGTGTTaGCTCTGGGTGGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPSRSSC*LWVDCH
Trigger: ATGGCAGTCCACCCAGAGTCAACACGACGACCGTGA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGCCACTGCCCATCATTaGCCTGAATGCTCTGAACAG +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSATAHH*PECSEQ
Trigger: CTGTTCAGAGCATTCAGGTCAATGATGGGCAGTGGC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGAAACCCGAATCACACTaGCAAACGGCGCCATCCAAA +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRKPESH*QTAPSK
Trigger: TTTGGATGGCGCCGTTTGTCAGTGTGATTCGGGTTT...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACATAGTCACTCATCATaGCCTCGGACTCCACTTCGC +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSHSHSS*PRTPLR
Trigger: GCGAAGTGGAGTCCGAGGTCATGATGAGTGACTATG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCACATGTTCATGTATCTaGTCTCTCCTTCATCCTATG +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSTCSCI*SLLHPM
Trigger: CATAGGATGAAGGAGAGATCAGATACATGAACATGT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TTCTGGGGGTGGAGGAAAATCACTTTCGATGTCGTAGCCTCCAGGGTAATAGTCAAAGTGACTGCGGAATaGGGAACCAGAAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: FWGWRKITFDVVASRVIVKVTAE*GTRNLA
Trigger: GGCCAAATTTCTGGTTCCTCATTCCGCAGTCACTTT...GACTATTACCCTGGAGGCTACGACATCGAAAGTGATTTTCCTCCACCCCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR TCA 90 bp TTCTGGGGGTGGAGGAAAATCACTTTCGATGTCGTAGCCTCCAGGGTAATAGTCGCTTGGCATCCAATCTaGTGTATCCCAGTGATACCA +
Preference number: 4 (lower is better)
Translates to: FWGWRKITFDVVASRVIVAWHPI*CIPVIP
Trigger: TGGTATCACTGGGATACATCAGATTGGATGCCAAGC...GACTATTACCCTGGAGGCTACGACATCGAAAGTGATTTTCCTCCACCCCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR GCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTTTGTATCCAGCACCTaGACCCTGACCTTTGTTCGC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRFVSST*TLTFVR
Trigger: GCGAACAAAGGTCAGGGTGCAGGTGCTGGATACAAA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTGTTGGTTCCTATGTCTaGATCCGTGGCGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTVGSYV*IRGADS
Trigger: AGAGTCAGCGCCACGGATGCAGACATAGGAACCAAC...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGGCCTGTTCGATGTaGACCGTTAGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTLACSM*TVSLAM
Trigger: CATGGCCAAGCTAACGGTGCACATCGAACAGGCCAA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTCTGCAGGAGCTTCTCTaGCAGCATTTTGGCAACACC +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTLQELL*QHFGNT
Trigger: GGTGTTGCCAAAATGCTGGCAGAGAAGCTCCTGCAG...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTATGCTCAGCTTATATaGCGGGTGGGCCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLYAQLI*RVGLKV
Trigger: GACTTTGAGGCCCACCCGGCATATAAGCTGAGCATA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCAGTCAGTTGCGCGTATaGTCAGCTTATATGCCGGGT +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGSQLRV*SAYMPG
Trigger: ACCCGGCATATAAGCTGAGCATACGCGCAACTGACT...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTCTGTAGCAGAGATCTaGATGATCAATTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSSVAEI*MINFPG
Trigger: TCCTGGAAAATTGATCATGCAGATCTCTGCTACAGA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGGTTAGAGCGGATGTCTaGGTCTGTAGCAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRVRADV*VCSRDL
Trigger: CAGATCTCTGCTACAGACGCAGACATCCGCTCTAAC...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAAAGCTCGCTGGAAGTTaGGCCAGTAGTCACCAACGA +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSKLAGS*ASSHQR
Trigger: TCGTTGGTGACTACTGGCGCAACTTCCAGCGAGCTT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGCTTTTCGGTGCCCGTaGACAGACTCGGGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSAFRCP*TDSGLK
Trigger: TTTTAACCCCGAGTCTGTGCACGGGCACCGAAAAGC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTTCAAGTTGAACCTCTaGCGGTTTCTTGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSFKLNL*RFLDEE
Trigger: TTCTTCATCAAGAAACCGGCAGAGGTTCAACTTGAA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGAAAGCTTGGAAGCACTaGTGCAAAGAACAGCGCGGA +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRKAWKH*CKEQRG
Trigger: TCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTT...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp ATCACTTTCGATGTCGTAGCCTCCAGGGTAATAGTCCGTATCGATGGCGTTTGGGTGGAGGAAAGTGACTaGGGAATGAGGAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: ITFDVVASRVIVRIDGVWVEESD*GMRNQK
Trigger: TTTCTGGTTCCTCATTCCGCAGTCACTTTCCTCCAC...CCAAACGCCATCGATACGGACTATTACCCTGGAGGCTACGACATCGAAAGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR CCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCGTCTGTTCAAGTCGTTaGCTGCCATCACTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLVCSSR*LPSLSP
Trigger: TGGAGACAGTGATGGCAGCCAACGACTTGAACAGAC...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAAGCTTATATGCCGGGTaGGCCTCAAAGTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSSLYAG*ASKSRG
Trigger: TCCTCTGGACTTTGAGGCCCACCCGGCATATAAGCT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCGTGAATCGTGGTaGACTATCGTTGACATCGGT +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSGRESW*TIVDIG
Trigger: ACCGATGTCAACGATAGTCCACCACGATTCACGGCC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACTCGGCCGTGAATCGTaGTGGACTATCGTTGACATC +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSLGRES*WTIVDI
Trigger: GATGTCAACGATAGTCCACCACGATTCACGGCCGAG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACCGTGGTACTTAAGATaGCAATCACCCCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSPWYLR*QSPHLG
Trigger: CCCAAGGTGGGGTGATTGCCATCTTAAGTACCACGG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGCGTGCCTCCATCAGTaGCCTCTACTGTTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGACLHQ*PLLLGN
Trigger: ATTACCTAACAGTAGAGGCCACTGATGGAGGCACGC...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTCCCAGCTAGGCTTCTaGATGGAGTCGCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTSQLGF*MESLSE
Trigger: TTCTGACAGCGACTCCATCCAGAAGCCTAGCTGGGA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGGTGTCTTTGATACCCTaGCGGGTAAGGGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPVSLIP*RVRGMG
Trigger: CCCCATGCCCCTTACCCGCCAGGGTATCAAAGACAC...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCCAGAGCAGGAGGCGGTaGAGGCGTACACAGACATGG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPQSRRR*RRTQTW
Trigger: CCATGTCTGTGTACGCCTCCACCGCCTCCTGCTCTG...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATAGTTCTCCTGCACGGTaGCGTTGTACTCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADSSPAR*RCTRGV
Trigger: CACACCTCGAGTACAACGTCACCGTGCAGGAGAACT...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTGTAAACACCCATCTTaGCAGGATGCCCCACATAAG +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSCKHPS*QDAPHK
Trigger: CTTATGTGGGGCATCCTGTCAAGATGGGTGTTTACA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACCGTCATTACCAATaGACCAACAGGTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRHRHYQ*TNRCIF
Trigger: GAAGATGCACCTGTTGGTTCATTGGTAATGACGGTG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGATCTGACGTCTCTATaGCACCTGTCTCTTCACCTA +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSDLTSL*HLSLHL
Trigger: TAGGTGAAGAGACAGGTGTCATAGAGACGTCAGATC...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGTGGTTGATGACTTTTaGGGGCGACCATTGTCAACT +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSVVDDF*GRPLST
Trigger: AGTTGACAATGGTCGCCCTCAAAAGTCATCAACCAC...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGATTACTCCAATCATGTaGGCAACGGGGTCACTTTCC +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLITPIM*ATGSLS
Trigger: GGAAAGTGACCCCGTTGCTCACATGATTGGAGTAAT...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTCGTAGTTGCCACCAGTaGTGTCAAACCAAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTRSCHQ*CQTKGV
Trigger: TACCCCTTTGGTTTGACATCACTGGTGGCAACTACG...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACGTAGTTGCCACCAGTaGTGTCAAACCAAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSRSCHQ*CQTKGV
Trigger: TACCCCTTTGGTTTGACATCACTGGTGGCAACTACG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTTTGGTCTTCTACAATaGCCTTCACGACAACGTGGG +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSFGLLQ*PSRQRG
Trigger: CCCACGTTGTCGTGAAGGTCATTGTAGAAGACCAAA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTCGTAGTAGGGAAGGTTaGCAAACACCGGCGCATTAT +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTRSREG*QTPAHY
Trigger: ATAATGCGCCGGTGTTTGTCAACCTTCCCTACTACG...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCAAGGGTCTCCGTCTGTaGTGCTGTAGAACACTTTCA +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGKGLRL*CCRTLS
Trigger: TGAAAGTGTTCTACAGCATCACAGACGGAGACCCTT...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTACAAATACTTCAGCATaGGCGCCCGTCAAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTTNTSA*APVKES
Trigger: TGACTCCTTGACGGGCGCTCATGCTGAAGTATTTGT...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCGGTATAGAAAGGTTCTaGAAATTTTGGAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSGIERF*KFWKLH
Trigger: ATGCAGCTTCCAAAATTTTCAGAACCTTTCTATACC...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTATCTCATGGTCATCTTaGGTGCACCTGGCCAGTATG +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTISWSS*VHLASM
Trigger: CATACTGGCCAGGTGCACTCAAGATGACCATGAGAT...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTGTTTTCAAACACGGTaGTGGCATAAGGATCGGCAG +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSCFQTR*WHKDRQ
Trigger: CTGCCGATCCTTATGCCATCACCGTGTTTGAAAACA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCCATGGATCTTCCCAATaGCGCCACCTGAGTATTCTT +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLHGSSQ*RHLSIL
Trigger: AAGAATACTCAGGTGGCGTCATTGGGAAGATCCATG...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATAACCTCCAGCAGGTaGCGGATTGCAAACGCCTCC +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPITSSR*RIANAS
Trigger: GGAGGCGTTTGCAATCCGTCACCTGCTGGAGGTTAT...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGGATGGATTCAAACTaGTTGCTGAATTCGGGCGGT +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLWMDSN*LLNSGG
Trigger: ACCGCCCGAATTCAGCAATCAGTTTGAATCCATCCA...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp AGCCTCCAGGGTAATAGTCCGTATCGATGGCGTTTGGATCTGCTGAGTACAGGGTCTTTTCCTTGTTTCTaGCAATCACAGCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: SLQGNSPYRWRLDLLSTGSFPCF*QSQPLS
Trigger: TGACAATGGCTGTGATTGTCAGAAACAAGGAAAAGA...CCCTGTACTCAGCAGATCCAAACGCCATCGATACGGACTATTACCCTGGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR TCA 90 bp ATCCCAGTGATACCAGAGGCCCAATCAGCCATACAGCATGTCCTTACGCCAGTATTACGCCAGTATCTATaGCAATTCCAAATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: IPVIPEAQSAIQHVLTPVLRQYL*QFQMAE
Trigger: CTCAGCCATTTGGAATTGTCATAGATACTGGCGTAA...TACTGGCGTAAGGACATGCTGTATGGCTGATTGGGCCTCTGGTATCACTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR GCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCCACATAAGTCTTAGCTaGAGAGTTCTCCTGCACGGT +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLHISLS*RVLLHG
Trigger: ACCGTGCAGGAGAACTCTGCAGCTAAGACTTATGTG...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTCCCATACAACTTCATaGCACGGTCCGCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPSHTTS*HGPQRG
Trigger: TCCTCGCTGCGGACCGTGGCATGAAGTTGTATGGGA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCATCCACTGTCACAATTaGATATGCTGGGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGIHCHN*ICWVPV
Trigger: GACAGGGACCCAGCATATGCAATTGTGACAGTGGAT...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCGAATCTGGATCAAATaGCTCGATCTGGACCACAGA +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLRIWIK*LDLDHR
Trigger: TCTGTGGTCCAGATCGAGGCATTTGATCCAGATTCG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACAAACCAAAGGGGTATaGCAGGAGGCTCCACAGATA +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSQTKGV*QEAPQI
Trigger: TATCTGTGGAGCCTCCTGGCATACCCCTTTGGTTTG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTTTATCAGCATCAGCTaGTCGAATCACCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSFISIS*SNHQWD
Trigger: GTCCCACTGGTGATTCGAGCAGCTGATGCTGATAAA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCAATGGCTTCAGGGCGTaGCGGTGCAGGTTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPNGFRA*RCRFER
Trigger: CCTCTCAAACCTGCACCGGCACGCCCTGAAGCCATT...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGAGAGAGGGTGTATACTaGCTGGAGTTCTCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLREGVY*LEFSVQ
Trigger: TTGGACAGAGAACTCCAGGCAGTATACACCCTCTCT...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGAACTCAGTCTGGCTGTaGTGTGTGTTGACATCACAC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRNSVWL*CVLTSH
Trigger: GTGTGATGTCAACACACAGCACAGCCAGACTGAGTT...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGACTCTTCGATGTGTaGATAGCTTCTGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRRLFDV*IASGFA
Trigger: AGCAAACCCAGAAGCTATGCACACATCGAAGAGTCG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTGTCGACAACACACGTaGCCCCATAGAGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPCRQHT*PHRGMA
Trigger: AGCCATGCCTCTATGGGGGCACGTGTGTTGTCGACA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGTGCTGAATTCGGGATaGTCTGGGATAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSVLNSG*SGIADP
Trigger: AGGATCTGCTATCCCAGAGCATCCCGAATTCAGCAC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTGCTTGGAAGCACTGCTaGAAAGAACAGCGCGGATTA +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTAWKHC*KEQRGL
Trigger: TAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGC...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACCCGGCTTTGAACTGTaGAGAAGTCACGTGAATGAC +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSPGFEL*RSHVND
Trigger: GTCATTCACGTGACTTCTCCACAGTTCAAAGCCGGG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCCTTTTCAAACTTGACTaGCCCGGCTTTGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLLFKLD*PGFELW
Trigger: CCACAGTTCAAAGCCGGGCCAGTCAAGTTTGAAAAG...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTCACCAAGACCTTGGTaGACGCTTTTCTGTCACTTG +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSSPRPW*TLFCHL
Trigger: CAAGTGACAGAAAAGCGTCCACCAAGGTCTTGGTGA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTCACCAAGACCTTGGTaGACGCTTTTCTGTCACTTG +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGSPRPW*TLFCHL
Trigger: CAAGTGACAGAAAAGCGTCCACCAAGGTCTTGGTGA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTTTCACCAAGACCTTaGTGGACGCTTTTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRLSPRP*WTLFCH
Trigger: GTGACAGAAAAGCGTCCACCAAGGTCTTGGTGAAAG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGCTTTGTACGCTGTCTaGGTAAATTCAGGGGGATTG +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGALYAV*VNSGGL
Trigger: CAATCCCCCTGAATTTACCCAGACAGCGTACAAAGC...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCCCACGCCTAGATCTCTaGGAATTGTCCCTTCACAAT +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLPRLDL*ELSLHN
Trigger: ATTGTGAAGGGACAATTCCCAGAGATCTAGGCGTGG...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCCGGGTGGATTATCATTaGCATCGACAACCACGACAT +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLRVDYH*HRQPRH
Trigger: ATGTCGTGGTTGTCGATGCCAATGATAATCCACCCG...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCTTTCACAACGACAGTaGAGAACAGCTGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLLSQRQ*RTAEAL
Trigger: AAGAGCCTCAGCTGTTCTCCACTGTCGTTGTGAAAG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTCAAAGTCCAACTGCTaGACGATCCTAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGSKSNC*TILTAP
Trigger: TGGAGCAGTTAGGATCGTCCAGCAGTTGGACTTTGA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGGGGACGGTTTGGGCTTaGAGATCCATTCAATATGGA +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLGTVWA*RSIQYG
Trigger: TCCATATTGAATGGATCTCCAAGCCCAAACCGTCCC...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTGTTAAGACTGTAAAATaGCTTCAGGGCGTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTVKTVK*LQGVPV
Trigger: CACCGGCACGCCCTGAAGCCATTTTACAGTCTTAAC...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGAGGGTGTATACTGCCTaGAGTTCTCTGTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLRVYTA*SSLSKG
Trigger: ACCTTTGGACAGAGAACTCCAGGCAGTATACACCCT...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAAGTGGATGTGGCTGTTaGAAGGTCCATCGGCATCAT +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSSGCGC*KVHRHH
Trigger: ATGATGCCGATGGACCTTCCAACAGCCACATCCACT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATCAATGTTCCACGGCGTaGACACATACTGGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADQCSTA*THTGWA
Trigger: CGCCCAACCAGTATGTGTCCACGCCGTGGAACATTG...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGGAATTCGGGATGCTCTaGGATAGCAGATCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLEFGML*DSRSFE
Trigger: TTCGAAGGATCTGCTATCCCAGAGCATCCCGAATTC...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTTCCCGGGCACTGTATaGCTGGGAAGGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPFPGTV*LGRLFL
Trigger: GAGGAAAAGCCTTCCCAGCCATACAGTGCCCGGGAA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GTGTCTGCTCATCAATCACCTCATAGTTGGGGAACTCTTGTATGTCCGGCAGAGCAATCACCTCATAGTTaGGGAACTCTTGTATGTCCG +
Preference number: 4 (lower is better)
Translates to: VSAHQSPHSWGTLVCPAEQSPHS*GTLVCP
Trigger: CGGACATACAAGAGTTCCCCAACTATGAGGTGATTG...CTCTGCCGGACATACAAGAGTTCCCCAACTATGAGGTGATTGATGAGCAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR CCA 90 bp TTGGGGAACTCTTGTATGTCCGGCAGAGGAACGCTTGGCATCCAATCTGATGTAAATAGTCCGTATCGATaGCGTTTGGATCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LGNSCMSGRGTLGIQSDVNSPYR*RLDLLS
Trigger: ACTCAGCAGATCCAAACGCCATCGATACGGACTATT...TACATCAGATTGGATGCCAAGCGTTCCTCTGCCGGACATACAAGAGTTCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR CCA 90 bp CAGGGTAATAGTCCGTATCGATGGCGTTTGGATCTGCTGAGTACAGGGGTGTCTAATGGAATATGGAAGTaGAGGAAAGTGACTGCGGAA +
Preference number: 4 (lower is better)
Translates to: QGNSPYRWRLDLLSTGVSNGIWK*RKVTAE
Trigger: TTCCGCAGTCACTTTCCTCCACTTCCATATTCCATT...AGACACCCCTGTACTCAGCAGATCCAAACGCCATCGATACGGACTATTACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR TCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTGTAAACACCCATCTTaGCAGGATGCCCCACATAAG +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTCKHPS*QDAPHK
Trigger: CTTATGTGGGGCATCCTGTCAAGATGGGTGTTTACA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTGCCACCGATGGCTTTaGCTTTATACTCCTTACTCC +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTCHRWL*LYTPYS
Trigger: GGAGTAAGGAGTATAAAGTCAAAGCCATCGGTGGCA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTGGTTTTCCTTTACCTaGATACCAGTCGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGWFSFT*IPVGRV
Trigger: CACTCTTCCGACTGGTATTCAGGTAAAGGAAAACCA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGGTCAGTGGAGTTCATaGAAATTACACTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGGQWSS*KLHWNP
Trigger: TGGGTTCCAGTGTAATTTTCATGAACTCCACTGACC...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCACAGTGGAGAACAGCTaGGGCTCTTCTCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPTVENS*GSSLAW
Trigger: CCAAGCCAGAGAAGAGCCTCAGCTGTTCTCCACTGT...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTCTCTTCACCTATTTTaGAAACACCAACGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLSLHLF*KHQRQS
Trigger: GCTCTGGCGTTGGTGTTTTCAAAATAGGTGAAGAGA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGGTAATAAACAGGCTCTaGTGTCTGTGGTGCATTGTC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRVINRL*CLWCIV
Trigger: GACAATGCACCACAGACATCAGAGCCTGTTTATTAC...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGTAATAAACAGGCTCTaGTGTCTGTGGTGCATTGTC +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSVINRL*CLWCIV
Trigger: GACAATGCACCACAGACATCAGAGCCTGTTTATTAC...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGTGGTTGATGACTTTTaGGGGCGACCATTGTCAACT +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSVVDDF*GRPLST
Trigger: AGTTGACAATGGTCGCCCTCAAAAGTCATCAACCAC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGTTGTCAGCAATTGTaGCAAAGATACGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRRCQQL*QRYAQK
Trigger: CTTCTGTGCGTATCTTTGTCACAATTGCTGACAACG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTACACCACTGATGATTaGCTATGGGCTGTAACCATC +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGYTTDD*LWAVTI
Trigger: GATGGTTACAGCCCATAGTCAATCATCAGTGGTGTA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTCGGTGGCTCTAACTTaGACAACAGACGTTCCAATT +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSSVALT*TTDVPI
Trigger: AATTGGAACGTCTGTTGTTCAAGTTAGAGCCACCGA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTCAGATGCCCTGATCTaGATTACTCTACTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTSDALI*ITLLPP
Trigger: AGGGGGAAGTAGAGTAATTCAGATCAGGGCATCTGA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTCAGCATCAGATGCCCTaGTCTGAATTACTCTACTTC +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSQHQMP*SELLYF
Trigger: GAAGTAGAGTAATTCAGATCAGGGCATCTGATGCTG...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTGTAGGTGTCTTGGCTaGACACAGGGGTATTATCGT +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTCRCLG*TQGYYR
Trigger: ACGATAATACCCCTGTGTTCAGCCAAGACACCTACA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCGTCAAAGATGACAACTaGGGCTTTCCATTATCTGCC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLVKDDN*GFPLSA
Trigger: GGCAGATAATGGAAAGCCTCAGTTGTCATCTTTGAC...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCAGAAGTTGTTTTGTTaGGATCTGAGCACTACCTGG +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGQKLFC*DLSTTW
Trigger: CCAGGTAGTGCTCAGATCTCAACAAAACAACTTCTG...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATGAACTCCCTGGGCACTaGCCAAACCTGCCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYELPGH*PNLPLG
Trigger: TCCCAGCGGCAGGTTTGGTCAGTGCCCAGGGAGTTC...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTGCCTTGTTCCCTGCTaGCGGATGTGGCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPCLVPC*RMWPPK
Trigger: TTTTGGTGGCCACATCCGTCAGCAGGGAACAAGGCA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACCAGTGCCTTTTGTTTaGGGTTCAGACATATCGAGG +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSPVPFV*GSDISR
Trigger: CCTCGATATGTCTGAACCTCAAACAAAAGGCACTGG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATCATAGTCACTCATCATaGCCTCGGACTCCACTTCGC +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADHSHSS*PRTPLR
Trigger: GCGAAGTGGAGTCCGAGGTCATGATGAGTGACTATG...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTCTGATGTATCCCAGTaGTACCCTCTTGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTSDVSQ*YPLGLL
Trigger: CAGCAAACCAAGAGGGTATCACTGGGATACATCAGA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512772.5
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCATTTCCAAAAGTACCTaGCTCGATCGAGTACAGCAC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLISKST*LDRVQH
Trigger: GTGCTGTACTCGATCGAGTCAGGTACTTTTGGAAAT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACAAATGTCTCCCCATTaGTTAACTGTCGGGAATCGC +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSQMSPH*LTVGNR
Trigger: GCGATTCCCGACAGTTAAGCAATGGGGAGACATTTG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGGAAACAGTGGTTATTTaGTCTCCCACGCCTAGATCT +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRETVVI*SPTPRS
Trigger: AGATCTAGGCGTGGGAGAGCAAATAACCACTGTTTC...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTTCTCAAAGTCCAACTaGTGGACGATCCTAACTGCT +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRFSKSN*WTILTA
Trigger: AGCAGTTAGGATCGTCCAGCAGTTGGACTTTGAGAA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTCCAGAGCCGTCACCTaGAACACAACTGAGCCAACG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPSRAVT*NTTEPT
Trigger: CGTTGGCTCAGTTGTGTTGCAGGTGACGGCTCTGGA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACATGGTCATCTTGAGTaGACCTGGCCAGTATGGAAA +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSHGHLE*TWPVWK
Trigger: TTTCCATACTGGCCAGGTGCACTCAAGATGACCATG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTCGTTAATGGAGAACTaGCCATCAGCAGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLSLMEN*PSAESI
Trigger: GATTGACTCTGCTGATGGGCAGTTCTCCATTAACGA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTCTGTTACTACCAGCTaGAGCACGCTGAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADSVTTS*STLKPT
Trigger: AGTGGGCTTCAGCGTGCTGCAGCTGGTAGTAACAGA...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTCAGCTTGCCCCCTGTaGTGGAAACAGAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADSACPL*WKQRTG
Trigger: ACCTGTTCTCTGTTTCCAGCACAGGGGGCAAGCTGA...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTACATGACAACCGCATaGGTGGAATATGTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGYMTTA*VEYVLS
Trigger: GCTCAGAACATATTCCACGCATGCGGTTGTCATGTA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCACCTTTACAAGACCATTaGATCACAAATATACAGACA +
Preference number: 4 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAPLQDH*ITNIQT
Trigger: TGTCTGTATATTTGTGATGCAATGGTCTTGTAAAGG...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCCTTACTTCCCACGCTaGATGTGTAATGTAAACACC +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGPYFPR*MCNVNT
Trigger: GGTGTTTACATTACACATCCAGCGTGGGAAGTAAGG...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCAAACGCTGTATGAGGTaGGTGAGAATAACGGTCTCA +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGKRCMR*VRITVS
Trigger: TGAGACCGTTATTCTCACCCACCTCATACAGCGTTT...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAAACGCTGTATGAGGTaGGTGAGAATAACGGTCTCA +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSKRCMR*VRITVS
Trigger: TGAGACCGTTATTCTCACCCACCTCATACAGCGTTT...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACTTTTCAAACTTGACTaGCCCGGCTTTGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSLFKLD*PGFELW
Trigger: CCACAGTTCAAAGCCGGGCCAGTCAAGTTTGAAAAG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTCCACGCCTAGATCTCTaGGAATTGTCCCTTCACAAT +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTPRLDL*ELSLHN
Trigger: ATTGTGAAGGGACAATTCCCAGAGATCTAGGCGTGG...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTCGGGTGGATTATCATTaGCATCGACAACCACGACAT +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTRVDYH*HRQPRH
Trigger: ATGTCGTGGTTGTCGATGCCAATGATAATCCACCCG...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATGGCTCTTCTCTGGCTTaGTCCCTGGCCTCAATCTTT +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADGSSLA*SLASIF
Trigger: AAAGATTGAGGCCAGGGACCAAGCCAGAGAAGAGCC...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACTTTCACAACGACAGTaGAGAACAGCTGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSLSQRQ*RTAEAL
Trigger: AAGAGCCTCAGCTGTTCTCCACTGTCGTTGTGAAAG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGATGACGGTTCCTTCTaGAAGATCCTCTCGGACTTT +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSDDGSF*KILSDF
Trigger: AAAGTCCGAGAGGATCTTCCAGAAGGAACCGTCATC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCTAAATCAGGATCGTaGGCTTCTAACCACATGATG +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRPKSGS*ASNHMM
Trigger: CATCATGTGGTTAGAAGCCCACGATCCTGATTTAGG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGAAGACAGAGAAACTaGCTTTCCCTTGTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSRRQRN*LSLVFG
Trigger: GCCAAAGACAAGGGAAAGCCAGTTTCTCTGTCTTCT...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCAATATGGAGTCTGGTaGTTGATGACTTTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGQYGVW*LMTFEG
Trigger: GCCCTCAAAAGTCATCAACCACCAGACTCCATATTG...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATGCTCCAGGGACGGTTTaGGCTTGGAGATCCATTCAA +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADAPGTV*AWRSIQ
Trigger: TTGAATGGATCTCCAAGCCCAAACCGTCCCTGGAGC...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATACAGGGCTGTGCACCTaGATGCTCTCTGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADTGLCT*MLSAIS
Trigger: AGAGATTGCAGAGAGCATCCAGGTGCACAGCCCTGT...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCATCTTGAGTGCACCTaGCCAGTATGGAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRHLECT*PVWKTD
Trigger: ATCAGTTTTCCATACTGGCCAGGTGCACTCAAGATG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCATCTTGAGTGCACCTaGCCAGTATGGAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGHLECT*PVWKTD
Trigger: ATCAGTTTTCCATACTGGCCAGGTGCACTCAAGATG...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAAGCACAATACTGGCTTaGCAGAATCTTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSSTILA*QNLPPP
Trigger: TGGAGGAGGAAGATTCTGCCAAGCCAGTATTGTGCT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGCGGATCGCGATGGTGTaGTTCAACATCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPRIAMV*FNISCV
Trigger: CACACAGGAGATGTTGAACCACACCATCGCGATCCG...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCCGCGCAGAGTTTCTaGAATACATTCAGTATCCTA +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRPAQSF*NTFSIL
Trigger: TAGGATACTGAATGTATTCCAGAAACTCTGCGCGGG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGAATAGTCCGTATCGATaGCGTTTGGATCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRNSPYR*RLDLLS
Trigger: ACTCAGCAGATCCAAACGCCATCGATACGGACTATT...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCAATAGTCCGTATCGATaGCGTTTGGATCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGNSPYR*RLDLLS
Trigger: ACTCAGCAGATCCAAACGCCATCGATACGGACTATT...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGGAAGTCTTCTGGGGGTaGAGGAAAATCACTTTCGAT +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLEVFWG*RKITFD
Trigger: ATCGAAAGTGATTTTCCTCCACCCCCAGAAGACTTC...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTTGGGACACTGGAAATaGCTAGCACGTCCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPLGHWK*LARPEA
Trigger: CGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGTGGAGAAGTCACGTaGATGACTTTAACAGAAGAG +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLCGEVT*MTLTEE
Trigger: CTCTTCTGTTAAAGTCATTCACGTGACTTCTCCACA...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCGAATGGCCTTTACCATaGCCACAGGTGTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPEWPLP*PQVCWE
Trigger: CTCCCAACACACCTGTGGTCATGGTAAAGGCCATTC...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTACTCACGGCACCAGTaGAATGGTCAATCGCAAACG +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPYSRHQ*NGQSQT
Trigger: CGTTTGCGATTGACCATTTCACTGGTGCCGTGAGTA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTCAGTGGAGTTCATaGAAATTACACTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSGQWSS*KLHWNP
Trigger: TGGGTTCCAGTGTAATTTTCATGAACTCCACTGACC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTGTGTCTGTAACAATTaGGTACGTCACGTGTCCGTT +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTCVCNN*VRHVSV
Trigger: AACGGACACGTGACGTACTCAATTGTTACAGACACA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCAGAGGCACGACACCCTaGTCGGTTGCAAAGACTGTT +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPRGTTP*SVAKTV
Trigger: AACAGTCTTTGCAACCGATCAGGGTGTCGTGCCTCT...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTCTATGTAGATCTCTATaGACGATGAAAGAGGCACGA +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSLCRSL*TMKEAR
Trigger: TCGTGCCTCTTTCATCGTTCATAGAGATCTACATAG...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTGTGAGGTTGTAGTTTaGCTTCTGTTCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLCEVVV*LLFCIK
Trigger: CTTGATGCAGAACAGAAGTCAAACTACAACCTCACA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTGTGAGGTTGTAGTTTaGCTTCTGTTCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSCEVVV*LLFCIK
Trigger: CTTGATGCAGAACAGAAGTCAAACTACAACCTCACA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGATCTGCGATCTGGGTTaGGGATGTGATAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRICDLG*GCDKTK
Trigger: CTTTGTTTTATCACATCCTCAACCCAGATCGCAGAT...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCCCCAAACATCTGGTATaGGATTCCTCTATTTGGTTC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLPKHLV*DSSIWF
Trigger: GAACCAAATAGAGGAATCTCATACCAGATGTTTGGG...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTATGTTCTGCTCGGATaGGATCTATCTCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRYVLLG*DLSLFQ
Trigger: TTGGAACAGAGATAGATCTCATCCGAGCAGAACATA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTATGTTCTGCTCGGATaGGATCTATCTCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSYVLLG*DLSLFQ
Trigger: TTGGAACAGAGATAGATCTCATCCGAGCAGAACATA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTAGTTGTCTCATaGTCAAGACTCTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRHLVVS*SRLFSN
Trigger: GTTGGAGAAGAGTCTTGATCATGAGACAACTAAGTG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTCAGCATCAGATGCCCTaGTCTGAATTACTCTACTTC +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTQHQMP*SELLYF
Trigger: GAAGTAGAGTAATTCAGATCAGGGCATCTGATGCTG...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGTTGCCATCTATAATTaGGTAGTGGATGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGVAIYN*VVDVAV
Trigger: AACAGCCACATCCACTACTCAATTATAGATGGCAAC...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGCAGAAGCTTGAACCGTaGGCGTGTAACCTGAAATCG +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPQKLEP*ACNLKS
Trigger: CGATTTCAGGTTACACGCTCACGGTTCAAGCTTCTG...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGGCTTGGCATCCAATCTaGTGTATCCCAGTGATACCC +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPAWHPI*CIPVIP
Trigger: GGGTATCACTGGGATACATCAGATTGGATGCCAAGC...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCCGTGGCGCTGACTCTTaGGATACTGGTCCTTATAGC +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPRGADS*DTGPYS
Trigger: GCTATAAGGACCAGTATCGCAAGAGTCAGCGCCACG...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATCTCACTGTTCTAAACTaGTGGAGAAGGTCACCTGCC +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADLTVLN*WRRSPA
Trigger: GGCAGGTGACCTTCTCCAGCAGTTTAGAACAGTGAG...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCGCTCTCTGCAATCTCTaGACTGTAGAAAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLALCNL*TVERFF
Trigger: GAAAAACCTTTCTACAGTGCAGAGATTGCAGAGAGC...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTATGCTCAGCTTATATaGCGGGTGGGCCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADYAQLI*RVGLKV
Trigger: GACTTTGAGGCCCACCCGGCATATAAGCTGAGCATA...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTGAAGGTGCCATCAGTTaGCGTGATAGTAAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTEGAIS*RDSKKV
Trigger: TACCTTCTTACTATCACGGCAACTGATGGCACCTTC...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCGGTGATTTCTGCATTTaGTTCAATATCCCGACTTGC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLGDFCI*FNIPTC
Trigger: GCAAGTCGGGATATTGAAGCAAATGCAGAAATCACC...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACCTTACTTCCCACGCTaGATGTGTAATGTAAACACC +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSPYFPR*MCNVNT
Trigger: GGTGTTTACATTACACATCCAGCGTGGGAAGTAAGG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTCTGTGGCTTCAACCTaGATGATTTCACTATGTACC +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSSVAST*MISLCT
Trigger: GGTACATAGTGAAATCATCCAGGTTGAAGCCACAGA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACAATATGGAGTCTGGTaGTTGATGACTTTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSQYGVW*LMTFEG
Trigger: GCCCTCAAAAGTCATCAACCACCAGACTCCATATTG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCAGCTTATATGCCGGGTaGGCCTCAAAGTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPSLYAG*ASKSRG
Trigger: TCCTCTGGACTTTGAGGCCCACCCGGCATATAAGCT...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCAGAATCAGCATCCGTaGTACTTAAGATGGCAATCA +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGQNQHP*YLRWQS
Trigger: TGATTGCCATCTTAAGTACCACGGATGCTGATTCTG...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTCAGAATCAGCATCCGTaGTACTTAAGATGGCAATCA +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSQNQHP*YLRWQS
Trigger: TGATTGCCATCTTAAGTACCACGGATGCTGATTCTG...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATCGTGTTGACTCTGGGTaGACTGCCATTATCAGAAGC +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADRVDSG*TAIIRS
Trigger: GCTTCTGATAATGGCAGTCCACCCAGAGTCAACACG...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGCAAAGCGGATCGCGATaGTGTGGTTCAACATCTCCT +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPQSGSR*CGSTSP
Trigger: AGGAGATGTTGAACCACACCATCGCGATCCGCTTTG...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACCCGCGCAGAGTTTCTaGAATACATTCAGTATCCTA +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSPAQSF*NTFSIL
Trigger: TAGGATACTGAATGTATTCCAGAAACTCTGCGCGGG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTCACAAAACTCAGTCTaGCTGTGCTGTGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTSQNSV*LCCVLT
Trigger: TGTCAACACACAGCACAGCCAGACTGAGTTTTGTGA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTCATCTTCACAGCCATaGTGGACAGGTGGGCACCTT +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPSSSQP*WTGGHL
Trigger: AAGGTGCCCACCTGTCCACCATGGCTGTGAAGATGA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTTCATCTTTGCAGTATaGACTAAGCTGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGFIFAV*TKLTPL
Trigger: CAGAGGTGTCAGCTTAGTCCATACTGCAAAGATGAA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTCCTCTAGAGGCTTCTTaGAAAGACAGGGATCAAGAT +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTPLEAS*KDRDQD
Trigger: ATCTTGATCCCTGTCTTTCCAAGAAGCCTCTAGAGG...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTGCCACCGATGGCTTTaGCTTTATACTCCTTACTCC +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPCHRWL*LYTPYS
Trigger: GGAGTAAGGAGTATAAAGTCAAAGCCATCGGTGGCA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATGATCTGACGTCTCTATaGCACCTGTCTCTTCACCTA +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADDLTSL*HLSLHL
Trigger: TAGGTGAAGAGACAGGTGTCATAGAGACGTCAGATC...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTACTCCAATCATGTaGGCAACGGGGTCACTTTCC +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPITPIM*ATGSLS
Trigger: GGAAAGTGACCCCGTTGCTCACATGATTGGAGTAAT...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTCCTGATCCACAGCACTaGTTTGCAAAATTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSPDPQH*FAKFLF
Trigger: AAACAGAAATTTTGCAAATCAGTGCTGTGGATCAGG...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCTGATCCACAGCACTaGTTTGCAAAATTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRPDPQH*FAKFLF
Trigger: AAACAGAAATTTTGCAAATCAGTGCTGTGGATCAGG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTTTACAGGCACATCTTaGTCTCGTACCATGACCGTG +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPFTGTS*SRTMTV
Trigger: CACGGTCATGGTACGAGATCAAGATGTGCCTGTAAA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTTCTCATCCTGCAAGTaGACTAGAACCGTTGTATTA +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRFSSCK*TRTVVL
Trigger: TAATACAACGGTTCTAGTTCACTTGCAGGATGAGAA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTACAAGCAAAGCATTTaGGTCTTTATCAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSYKQSI*VFISIS
Trigger: GCTGATGCTGATAAAGACTCAAATGCTTTGCTTGTA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATCGATGTTGCCTTCGGTaGTGGAGTAAATCAACTGTG +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADRCCLR*WSKSTV
Trigger: CACAGTTGATTTACTCCATCACCGAAGGCAACATCG...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAAATTGCTTTTTCAGTaGAATTTCACCCAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSKLLFQ*NFTQGS
Trigger: GGACCCTTGGGTGAAATTTCACTGAAAAAGCAATTT...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCATGGCAAAGGATTCAATaGCTTCCACACTTTGTGACT +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSWQRIQ*LPHFVT
Trigger: AGTCACAAAGTGTGGAAGTCATTGAATCCTTTGCCA...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTGGATCTTTTCACCATaGTCTGATGCAACCACTTTA +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGWIFSP*SDATTL
Trigger: TAAAGTGGTTGCATCAGATCATGGTGAAAAGATCCA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTCCATCTGTGGCCCTaGCGAGAAGATGATAAACAG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPLHLWP*REDDKQ
Trigger: CTGTTTATCATCTTCTCGTCAGGGCCACAGATGGAG...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATCATGGATCTTCCCAATaGCGCCACCTGAGTATTCTT +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADHGSSQ*RHLSIL
Trigger: AAGAATACTCAGGTGGCGTCATTGGGAAGATCCATG...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATATTCAAACTGATTGCTaGATTCGGGCGGTAACGGTG +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADIQTDC*IRAVTV
Trigger: CACCGTTACCGCCCGAATTCAGCAATCAGTTTGAAT...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAAATACTGATTCAAGTTaGACCTCTGCCGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSNTDSS*TSAGFL
Trigger: CAAGAAACCGGCAGAGGTTCAACTTGAATCAGTATT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCAAATTGGGCAAATACTaGTTCAAGTTGAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLKLGKY*FKLNLC
Trigger: GCAGAGGTTCAACTTGAATCAGTATTTGCCCAATTT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGAAATGGCACAGCCGATaGAAACCTCACGATGACAGT +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPKWHSR*KPHDDS
Trigger: ACTGTCATCGTGAGGTTTTCATCGGCTGTGCCATTT...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTACATGTTCATGTATCTaGTCTCTCCTTCATCCTATG +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSTCSCI*SLLHPM
Trigger: CATAGGATGAAGGAGAGATCAGATACATGAACATGT...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTTTAAGGAGTGCTCATaGTGCAGCTCTCGATCCAGA +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADFKECS*CSSRSR
Trigger: TCTGGATCGAGAGCTGCAGCATGAGCACTCCTTAAA...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCAATATGTGTTCATCTTaGTGTTCTCGGTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGNMCSS*CSRSSF
Trigger: GAAGCTAGACCGAGAACAGCAAGATGAACACATATT...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAATAGAGAGAGCCGGTTaGAGGATCAAGACGAAATTT +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSIERAG*RIKTKF
Trigger: AAATTTCGTCTTGATCCTGCAACCGGCTCTCTCTAT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTCAATCCTTGCAAAGTTaGGTTTTACAGGCACATCTT +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSQSLQS*VLQAHL
Trigger: AAGATGTGCCTGTAAAACGCAACTTTGCAAGGATTG...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGTTCCCTCCATCTTTTaGAACCACTGTAACAAGATA +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGVPSIF*NHCNKI
Trigger: TATCTTGTTACAGTGGTTGCAAAAGATGGAGGGAAC...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATCGTCAAGGAGTCAGTTaGGCGTATGCTCAGCTTATA +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADRQGVS*AYAQLI
Trigger: TATAAGCTGAGCATACGCGCAACTGACTCCTTGACG...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCGGTGATAATCCCTGTTaGACTGTCAATGACAAAATG +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLGDNPC*TVNDKM
Trigger: CATTTTGTCATTGACAGTGCAACAGGGATTATCACC...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATAGAGAGGGTGTATACTaGCTGGAGTTCTCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADREGVY*LEFSVQ
Trigger: TTGGACAGAGAACTCCAGGCAGTATACACCCTCTCT...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTCAATATCCCGACTTaGTGCATACACTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLFNIPT*CIHLKN
Trigger: GTTCTTCAAGTGTATGCAGCAAGTCGGGATATTGAA...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCGTCTGTTCAAGTCGTTaGCTGCCATCACTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPVCSSR*LPSLSP
Trigger: TGGAGACAGTGATGGCAGCCAACGACTTGAACAGAC...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATGCTGAGGCTCTTCTCTaGCTTGGTCCCTGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYAEALL*LGPWPQ
Trigger: TTGAGGCCAGGGACCAAGCCAGAGAAGAGCCTCAGC...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTCAAATGCCTCGATCTaGACCACAGATACATCTTTA +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLSNASI*TTDTSL
Trigger: TAAAGATGTATCTGTGGTCCAGATCGAGGCATTTGA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAATTAGAGCTCGAATCTaGATCAAATGCCTCGATCTG +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSIRARI*IKCLDL
Trigger: CAGATCGAGGCATTTGATCCAGATTCGAGCTCTAAT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGGGGACGGTTTGGGCTTaGAGATCCATTCAATATGGA +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPGTVWA*RSIQYG
Trigger: TCCATATTGAATGGATCTCCAAGCCCAAACCGTCCC...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATGTGAACCACGGGGCGTaGTCATTCGTGTCGCTGACA +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYVNHGA*SFVSLT
Trigger: TGTCAGCGACACGAATGACCACGCCCCGTGGTTCAC...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTATTTCACTCATTGGTaGACTGCCCTTATCTGTAGC +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTYFTHW*TALICS
Trigger: GCTACAGATAAGGGCAGTCCACCAATGAGTGAAATA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGAGTTATTTCACTCATTaGTGGACTGCCCTTATCTGT +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLSYFTH*WTALIC
Trigger: ACAGATAAGGGCAGTCCACCAATGAGTGAAATAACT...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTGTTCAAAGAGTGGTaGATTATCATTGAGGTCGGT +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLLFKEW*IIIEVG
Trigger: ACCGACCTCAATGATAATCCACCACTCTTTGAACAA...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTTGTTCAAAGAGTGGTaGATTATCATTGAGGTCGGT +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLLFKEW*IIIEVG
Trigger: ACCGACCTCAATGATAATCCACCACTCTTTGAACAA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGAAGCTGCATTTCCGGTaGAAGGATTTTAACATAGAC +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRKLHFR*KDFNID
Trigger: GTCTATGTTAAAATCCTTCCACCGGAAATGCAGCTT...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCAAGCTGCATTTCCGGTaGAAGGATTTTAACATAGAC +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLKLHFR*KDFNID
Trigger: GTCTATGTTAAAATCCTTCCACCGGAAATGCAGCTT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAATGAATGCCTCATATaGACTAGATTCAAAGACCGG +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSNECLI*TRFKDR
Trigger: CCGGTCTTTGAATCTAGTCCATATGAGGCATTCATT...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCATACTCTACTTCCCCCTaGCAGGTTTTCAACAATGAA +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSYSTSP*QVFNNE
Trigger: TTCATTGTTGAAAACCTGCCAGGGGGAAGTAGAGTA...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGTGAACGAGCTTCCTTaGTTGCCATCTATAATTGAG +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSVNELP*LPSIIE
Trigger: CTCAATTATAGATGGCAACCAAGGAAGCTCGTTCAC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGACGCTTATCTCACAGTaGGTCCCTATGTACAAGGCA +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPTLISQ*VPMYKA
Trigger: TGCCTTGTACATAGGGACCCACTGTGAGATAAGCGT...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTATAATCCTCTACACTaGCAAACAAAGCCTCCGTTG +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTYNPLH*QTKPPL
Trigger: CAACGGAGGCTTTGTTTGCCAGTGTAGAGGATTATA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTATCGCAAACGGCACATaGTTTAAATTTGCGATACTG +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTIANGT*FKFAIL
Trigger: CAGTATCGCAAATTTAAATCATGTGCCGTTTGCGAT...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCGCGGTATGTGAGCATTaGCAGAGTGAGAATCGAAGA +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPAVCEH*QSENRR
Trigger: TCTTCGATTCTCACTCTGTCAATGCTCACATACCGC...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCCAAGGATTTTCACAATaGCTCTTGCAATGGTTGATT +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGQGFSQ*LLQWLI
Trigger: AATCAACCATTGCAAGAGTCATTGTGAAAATCCTTG...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTTTACAGGCACATCTTaGTCTCGTACCATGACCGTG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPFTGTS*SRTMTV
Trigger: CACGGTCATGGTACGAGATCAAGATGTGCCTGTAAA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCATACAAGCAAAGCATTTaGGTCTTTATCAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSYKQSI*VFISIS
Trigger: GCTGATGCTGATAAAGACTCAAATGCTTTGCTTGTA...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGGACTTCCACACTTTGTaGCTGATCCAGGCTATACAT +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPDFHTL*LIQAIH
Trigger: ATGTATAGCCTGGATCAGTCACAAAGTGTGGAAGTC...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGGTCAAAGATGACAACTaGGGCTTTCCATTATCTGCC +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPVKDDN*GFPLSA
Trigger: GGCAGATAATGGAAAGCCTCAGTTGTCATCTTTGAC...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCAATGTATGTCAAAGATaGCAACTGAGGCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLNVCQR*QLRLSI
Trigger: AATGGAAAGCCTCAGTTGTCATCTTTGACATACATT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCAATGTATGTCAAAGATaGCAACTGAGGCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGNVCQR*QLRLSI
Trigger: AATGGAAAGCCTCAGTTGTCATCTTTGACATACATT...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTATACATGAATCATGCTaGCAACACAGGACTGATTTT +
Preference number: 4 (lower is better)
Translates to: KSLEALLQRTARITHITSIHESC*QHRTDF
Trigger: AAAATCAGTCCTGTGTTGTCAGCATGATTCATGTAT...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATGCTGGAACAGCTTCATaGTCCAGTTTCTCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADAGTAS*SSFSEV
Trigger: TACTTCTGAGAAACTGGATCATGAAGCTGTTCCAGC...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614102.4
CDS-3UTR GCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATGCTGCAGAGTTCTCCTaGACGGTGACGTTGTACTCG +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYAAEFS*TVTLYS
Trigger: CGAGTACAACGTCACCGTGCAGGAGAACTCTGCAGC...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTGTAATTTATTTGCCTaGAGGAGCTTCTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADCNLFA*RSFSAS
Trigger: GCTGGCAGAGAAGCTCCTGCAGGCAAATAAATTACA...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTCAATCTTTAAGGAGTaGTCATGCTGCAGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADSIFKE*SCCSSR
Trigger: TCGAGAGCTGCAGCATGAGCACTCCTTAAAGATTGA...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAATTGACCACAATCCTTaGAAAGTTGCGTTTTACAGG +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSIDHNP*KVAFYR
Trigger: CCTGTAAAACGCAACTTTGCAAGGATTGTGGTCAAT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGGAGTCCTGTATATTCTaGCTGCATAAAAACTGGCGC +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPESCIF*LHKNWR
Trigger: GCGCCAGTTTTTATGCAGGCAGAATATACAGGACTC...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCACCGTGATGACAGACTaGTCAAGAACGGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPTVMTD*SRTASS
Trigger: TGAAGATGCCGTTCTTGAGCAGTCTGTCATCACGGT...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGACATTGAGAAGGTATTaGCCTATGTCTAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLTLRRY*PMSSFL
Trigger: CAAAAAGCTAGACATAGGGCAATACCTTCTCAATGT...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGACAAGGCACTGCATTTaGAGTAATAACCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPTRHCI*SNNLQQ
Trigger: CTGCTGGAGGTTATTACTGCAAATGCAGTGCCTTGT...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTCAAGTTGAACCTCTaGCGGTTTCTTGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTFKLNL*RFLDEE
Trigger: TTCTTCATCAAGAAACCGGCAGAGGTTCAACTTGAA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTCAAAGTCCAACTGCTaGACGATCCTAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPSKSNC*TILTAP
Trigger: TGGAGCAGTTAGGATCGTCCAGCAGTTGGACTTTGA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTTGCAATGGTTGATTTaGGGGGACTACCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADLQWLI*GDYHCL
Trigger: CAGACAATGGTAGTCCCCCCAAATCAACCATTGCAA...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCATTCAATATGGAGTCTaGTGGTTGATGACTTTTGAG +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLIQYGV*WLMTFE
Trigger: CTCAAAAGTCATCAACCACCAGACTCCATATTGAAT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCATGTTTCGGCCTCGGTaGAATTCTCTTTCACTACCG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPMFRPR*NSLSLP
Trigger: CGGTAGTGAAAGAGAATTCCACCGAGGCCGAAACAT...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCAAAGGCTCATTGATTaGATTCCCAATAGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLQRLID*IPNSSN
Trigger: ATTACTGCTATTGGGAATCCAATCAATGAGCCTTTG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTCTGTTGTTCAAAGAGTaGTGGATTATCATTGAGGTC +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTLLFKE*WIIIEV
Trigger: GACCTCAATGATAATCCACCACTCTTTGAACAACAG...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTCATTGCCAGACAGAATaGAATACTGCAACTTGTCTA +
Preference number: 4 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTHCQTE*NTATCL
Trigger: TAGACAAGTTGCAGTATTCCATTCTGTCTGGCAATG...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTCACAAAACTCAGTCTaGCTGTGCTGTGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPSQNSV*LCCVLT
Trigger: TGTCAACACACAGCACAGCCAGACTGAGTTTTGTGA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGCAATCACCTCATAGTTaGGGAACTCTTGTATGTCCG +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPQSPHS*GTLVCP
Trigger: CGGACATACAAGAGTTCCCCAACTATGAGGTGATTG...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TTGGGGAACTCTTGTATGTCCGGCAGAGGAACGCTTGGCATCCAATCTGATGTATATGACAATTCCAAATaGCTGAGAAATGTATGTACC +
Preference number: 4 (lower is better)
Translates to: LGNSCMSGRGTLGIQSDVYDNSK*LRNVCT
Trigger: GGTACATACATTTCTCAGCCATTTGGAATTGTCATA...TACATCAGATTGGATGCCAAGCGTTCCTCTGCCGGACATACAAGAGTTCCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTGTACTCTTCAGCTTTaGACAGGTTTTCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPCTLQL*TGFHCL
Trigger: GAGACAGTGAAAACCTGTTCAAAGCTGAAGAGTACA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATGTAGTCCAGGTTTTCTaGCGTACTCACGGCACCAGT +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYVVQVF*RTHGTS
Trigger: ACTGGTGCCGTGAGTACGTCAGAAAACCTGGACTAC...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTGGTTTTCCTTTACCTaGATACCAGTCGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPWFSFT*IPVGRV
Trigger: CACTCTTCCGACTGGTATTCAGGTAAAGGAAAACCA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTCTCTTCACCTATTTTaGAAACACCAACGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPSLHLF*KHQRQS
Trigger: GCTCTGGCGTTGGTGTTTTCAAAATAGGTGAAGAGA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTACACCACTGATGATTaGCTATGGGCTGTAACCATC +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPYTTDD*LWAVTI
Trigger: GATGGTTACAGCCCATAGTCAATCATCAGTGGTGTA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATATCTGCGATCTGGGTTaGGGATGTGATAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADICDLG*GCDKTK
Trigger: CTTTGTTTTATCACATCCTCAACCCAGATCGCAGAT...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTCGGTGGCTCTAACTTaGACAACAGACGTTCCAATT +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPSVALT*TTDVPI
Trigger: AATTGGAACGTCTGTTGTTCAAGTTAGAGCCACCGA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTCTTTAGGTTCAGCCTaGTGCTTCTTTTTCCGACTA +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADSLGSA*CFFFRL
Trigger: TAGTCGGAAAAAGAAGCATCAGGCTGAACCTAAAGA...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGAATACTGATTCAAGTTaGACCTCTGCCGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPNTDSS*TSAGFL
Trigger: CAAGAAACCGGCAGAGGTTCAACTTGAATCAGTATT...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TGGAGGAAAATCACTTTCGATGTCGTAGCCTCCAGGGTAATAGTCCGTATCGATACAATTCCAAATGGCTaGGAAATGTATGTACCACAA +
Preference number: 4 (lower is better)
Translates to: WRKITFDVVASRVIVRIDTIPNG*EMYVPQ
Trigger: TTGTGGTACATACATTTCTCAGCCATTTGGAATTGT...ATCGATACGGACTATTACCCTGGAGGCTACGACATCGAAAGTGATTTTCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR GCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCGTTCAAGTCGTTGGCTaGCATCACTGTCTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPVQVVG*HHCLQN
Trigger: ATTTTGGAGACAGTGATGGCAGCCAACGACTTGAAC...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTCAGTGGATCTCTACTaGTCTGCAGAGTGTAGATTA +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPSVDLY*SAECRL
Trigger: TAATCTACACTCTGCAGAGCAGTAGAGATCCACTGA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAAATGATCATGACTCTTaGTGTGATTCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSNDHDS*CDSQTS
Trigger: AGATGTTTGGGAATCACAGCAAGAGTCATGATCATT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATGCTTTTCGGTGCCCGTaGACAGACTCGGGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYAFRCP*TDSGLK
Trigger: TTTTAACCCCGAGTCTGTGCACGGGCACCGAAAAGC...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTTAACAGAAGAGAACTaGGGCGGAGTTCCTTTATCT +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADLTEEN*GGVPLS
Trigger: AGATAAAGGAACTCCGCCCCAGTTCTCTTCTGTTAA...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGAAATCATACTCCGCTTaGTTACTTCGATCTAATTCT +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRKSYSA*LLRSNS
Trigger: AGAATTAGATCGAAGTAACCAAGCGGAGTATGATTT...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCAAATCATACTCCGCTTaGTTACTTCGATCTAATTCT +
Preference number: 4 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLKSYSA*LLRSNS
Trigger: AGAATTAGATCGAAGTAACCAAGCGGAGTATGATTT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACAAAGGCTCATTGATTaGATTCCCAATAGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSQRLID*IPNSSN
Trigger: ATTACTGCTATTGGGAATCCAATCAATGAGCCTTTG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTTTAAATCTGCGATCTaGGTTGAGGATGTGATAAAA +
Preference number: 4 (lower is better)
Translates to: LQRTARITHITSRFTKVRFKSAI*VEDVIK
Trigger: TTTTATCACATCCTCAACCCAGATCGCAGATTTAAA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTACTCTACTTCCCCCTaGCAGGTTTTCAACAATGAA +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPYSTSP*QVFNNE
Trigger: TTCATTGTTGAAAACCTGCCAGGGGGAAGTAGAGTA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCCATCCACAATGGCTGTaGAGGATAGCTGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPHPQWL*RIAGSF
Trigger: AAAAGATCCAGCTATCCTCCACAGCCATTGTGGATG...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAAGTCTTTTCACAAACTaGACTGTTGTCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSSLFTN*TVVICI
Trigger: GATGCAAATGACAACAGTCCAGTTTGTGAAAAGACT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCAAGGGTGGACCGTTATaGGAAGAATCCTCATCTGTT +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPKGGPL*EESSSV
Trigger: AACAGATGAGGATTCTTCCCATAACGGTCCACCCTT...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATCAGTTTTCGGTTCGATaGAAAATTTGCCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADQFSVR*KICHAH
Trigger: ATGAGCATGGCAAATTTTTCATCGAACCGAAAACTG...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTTTGATGTAGAAAACTaGGGACGATGGTCATTTGTG +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPFDVEN*GRWSFV
Trigger: CACAAATGACCATCGTCCTCAGTTTTCTACATCAAA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTGTTTTGTTGAGATCTaGGCACTACCTGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPCFVEI*ALPGFS
Trigger: AGAGAAACCAGGTAGTGCTCAGATCTCAACAAAACA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTTCCTCGAGCATACATaGCAACCGCATGCGTGGAAT +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYFLEHT*QPHAWN
Trigger: ATTCCACGCATGCGGTTGTCATGTATGCTCGAGGAA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTCAAAATGGGCTGCCTaGTGTCTTTTAACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPSKWAA*CLLTGS
Trigger: AGAACCAGTTAAAAGACAGCAGGCAGCCCATTTTGA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCAAGTTCAAAATGGGCTaGCTGCTGTCTTTTAACTGG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPKFKMG*LLSFNW
Trigger: CCAGTTAAAAGACAGCAGGCAGCCCATTTTGAACTT...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTGGACTGTTGTCATTTaGATCCAGAACTTTCACTTC +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPWTVVI*IQNFHF
Trigger: GAAGTGAAAGTTCTGGATGCAAATGACAACAGTCCA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATGTTAGAGCGGATGTCTaGGTCTGTAGCAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYVRADV*VCSRDL
Trigger: CAGATCTCTGCTACAGACGCAGACATCCGCTCTAAC...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCGATGAATCTCCAAGATaGTATAGTCAGTTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPDESPR*YSQFLE
Trigger: CTCGAGGAACTGACTATAGCATCTTGGAGATTCATC...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATCATTGCCAGACAGAATaGAATACTGCAACTTGTCTA +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADHCQTE*NTATCL
Trigger: TAGACAAGTTGCAGTATTCCATTCTGTCTGGCAATG...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATAACAACTTCATACTTTaGTGTAGAAAACTGAGGACG +
Preference number: 4 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADNNFIL*CRKLRT
Trigger: CGTCCTCAGTTTTCTACATCAAAGTATGAAGTTGTT...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTTCTCATCCTGCAAGTaGACTAGAACCGTTGTATTA +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPFSSCK*TRTVVL
Trigger: TAATACAACGGTTCTAGTTCACTTGCAGGATGAGAA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCAACTCCATCAGACACTaGCAGGTTAAGACTGTAAAA +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPNSIRH*QVKTVK
Trigger: TTTTACAGTCTTAACCTGTCAGTGTCTGATGGAGTT...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATCTGGAGTATTCCCTTTaGCCAGGCTGTAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYLEYSL*PGCKEQ
Trigger: CTGTTCTTTACAGCCTGGTCAAAGGGAATACTCCAG...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTGTCTGGATTTAGTTTaGATTTTTCTGCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPCLDLV*IFLHLN
Trigger: GTTCAGGTGCAGAAAAATTCAAACTAAATCCAGACA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTGTTTTCAAACACGGTaGTGGCATAAGGATCGGCAG +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYCFQTR*WHKDRQ
Trigger: CTGCCGATCCTTATGCCATCACCGTGTTTGAAAACA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTGGATGGATTCAAACTaGTTGCTGAATTCGGGCGGT +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYWMDSN*LLNSGG
Trigger: ACCGCCCGAATTCAGCAATCAGTTTGAATCCATCCA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCAAATTGGGCAAATACTaGTTCAAGTTGAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPKLGKY*FKLNLC
Trigger: GCAGAGGTTCAACTTGAATCAGTATTTGCCCAATTT...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTTTAAGGAGTGCTCATaGTGCAGCTCTCGATCCAGA +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYFKECS*CSSRSR
Trigger: TCTGGATCGAGAGCTGCAGCATGAGCACTCCTTAAA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTTTATCAGCATCAGCTaGTCGAATCACCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYFISIS*SNHQWD
Trigger: GTCCCACTGGTGATTCGAGCAGCTGATGCTGATAAA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTATCACACCACTGGTTaGGTGAATAGCAAACATATC +
Preference number: 4 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPYHTTG*VNSKHI
Trigger: GATATGTTTGCTATTCACCCAACCAGTGGTGTGATA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATGAATTCGGGATGCTCTaGGATAGCAGATCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYEFGML*DSRSFE
Trigger: TTCGAAGGATCTGCTATCCCAGAGCATCCCGAATTC...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATGAGTCCTGTATATTCTaGCTGCATAAAAACTGGCGC +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYESCIF*LHKNWR
Trigger: GCGCCAGTTTTTATGCAGGCAGAATATACAGGACTC...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATAGTAAAATTCCCCGTTaGTTCCTATGTCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYSKIPR*FLCLHP
Trigger: CGGATGCAGACATAGGAACCAACGGGGAATTTTACT...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATCTGCTGAAAACCTCTTaGACGAAACCACTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYLLKTS*TKPLQF
Trigger: AAACTGGAGTGGTTTCGTCCAAGAGGTTTTCAGCAG...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATAAGGGTGGACCGTTATaGGAAGAATCCTCATCTGTT +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYKGGPL*EESSSV
Trigger: AACAGATGAGGATTCTTCCCATAACGGTCCACCCTT...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATACTTTGATGAATACCTaGGTGAGGATAGTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYTLMNT*VRIVVV
Trigger: AACCACCACTATCCTCACTCAGGTATTCATCAAAGT...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATCACTTAGTTGTCTCATaGTCAAGACTCTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYHLVVS*SRLFSN
Trigger: GTTGGAGAAGAGTCTTGATCATGAGACAACTAAGTG...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTGGCAAAGGATTCAATaGCTTCCACACTTTGTGACT +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYWQRIQ*LPHFVT
Trigger: AGTCACAAAGTGTGGAAGTCATTGAATCCTTTGCCA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTGTTTTGTTGAGATCTaGGCACTACCTGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYCFVEI*ALPGFS
Trigger: AGAGAAACCAGGTAGTGCTCAGATCTCAACAAAACA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTTTGATGTAGAAAACTaGGGACGATGGTCATTTGTG +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYFDVEN*GRWSFV
Trigger: CACAAATGACCATCGTCCTCAGTTTTCTACATCAAA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR TCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATAAATTGCTTTTTCAGTaGAATTTCACCCAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYKLLFQ*NFTQGS
Trigger: GGACCCTTGGGTGAAATTTCACTGAAAAAGCAATTT...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR GCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATCAATCCTTGCAAAGTTaGGTTTTACAGGCACATCTT +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYQSLQS*VLQAHL
Trigger: AAGATGTGCCTGTAAAACGCAACTTTGCAAGGATTG...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CCA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATACTTCAAGTTCAAAATaGGCTGCCTGCTGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYTSSSK*AACCLL
Trigger: TAAAAGACAGCAGGCAGCCCATTTTGAACTTGAAGT...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp GAGCTCACCCGCCGTCTCAGCGCGCCCCCGAGCAGGGACCGGGCCTaGCGGGGCCCTCGCCGGGCTCGCGCGTCCGCATGGTACCTGCCG +
Preference number: 5 (lower is better)
Translates to: ELTRRLSAPPSRDRA*RGPRRARASAWYLP
Trigger: CGGCAGGTACCATGCGGACGCGCGAGCCCGGCGAGGGCCCCGGCAGGCCCGGTCCCTGCTCGGGGGCGCGCTGAGACGGCGGGTGAGCTC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp TGTCGGGAATCGCAAAGTTGGCCCGAAGTGGCGACGGCGCTCTCGTaGAGCTCACCCGCCGTCTCAGCGCGCCCCCGAGCAGGGACCGGG +
Preference number: 5 (lower is better)
Translates to: CRESQSWPEVATALS*SSPAVSARPRAGTG
Trigger: CCCGGTCCCTGCTCGGGGGCGCGCTGAGACGGCGGGTGAGCTCCACGAGAGCGCCGTCGCCACTTCGGGCCAACTTTGCGATTCCCGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp GCAGCCAAGTTTGTCAGGACGTGCCCAGGCAGCCAGCCGCCGAGTTaGGGAGTTGCGGCCGCCGGCTGCGGCGACTCGCTGCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: AAKFVRTCPGSQPPS*GVAAAGCGDSLPLS
Trigger: GGAAAGAGGCAGCGAGTCGCCGCAGCCGGCGGCCGCAACTCCTCAACTCGGCGGCTGGCTGCCTGGGCACGTCCTGACAAACTTGGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509647.1
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGTGGGGGAGGCAGGTTaGGCGCCACGCTGCAGACCG +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPVGEAG*APRCRP
Trigger: CGGTCTGCAGCGTGGCGCCAAACCTGCCTCCCCCAC...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS GCA 90 bp GCGCAGCATCCTCGCAGTGACGTCCCCTGTACTCGTGGCTGCAGTTaGAGTGATAGGAGCCGTGCGTGTTCTCACAGAGGGCCCCGTGCA +
Preference number: 5 (lower is better)
Translates to: AQHPRSDVPCTRGCS*SDRSRACSHRGPRA
Trigger: TGCACGGGGCCCTCTGTGAGAACACGCACGGCTCCTATCACTGCAACTGCAGCCACGAGTACAGGGGACGTCACTGCGAGGATGCTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000507105.1
ENST00000614102.4
CDS GCA 90 bp GGTTGGGCGCAGCATCCTCGCAGTGACGTCCCCTGTACTCGTGGCTaGAGTTGCAGTGATAGGAGCCGTGCGTGTTCTCACAGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: GWAQHPRSDVPCTRG*SCSDRSRACSHRGP
Trigger: GGGCCCTCTGTGAGAACACGCACGGCTCCTATCACTGCAACTGCAGCCACGAGTACAGGGGACGTCACTGCGAGGATGCTGCGCCCAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000507105.1
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATCGGGAATCGCAAAGTaGGCCCGAAGTGGCGACGGC +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKSGIAK*ARSGDG
Trigger: GCCGTCGCCACTTCGGGCCAACTTTGCGATTCCCGA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCACTGTGGCCTGCACTCTaGTCAGCAGCGTTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPLWPAL*SAAFPA
Trigger: AGCCGGGAACGCTGCTGACAAGAGTGCAGGCCACAG...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp ACACGTCAGAGCAGGAGGCGGTGGAGGCGTACACAGACATGGGCATaGTCTCGACAGCGGGCGCCTCGAAGTGTCTTTGATACCCTGGCG +
Preference number: 5 (lower is better)
Translates to: TRQSRRRWRRTQTWA*SRQRAPRSVFDTLA
Trigger: CGCCAGGGTATCAAAGACACTTCGAGGCGCCCGCTGTCGAGAGCATGCCCATGTCTGTGTACGCCTCCACCGCCTCCTGCTCTGACGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS GCA 90 bp TCCGACCAGGGCAAACTTAAGCACCAAACGCAGGCGAAAAGAGAGTaGGCGGGGCCGGAACGAGGGCCCGGGAGCAGCCAAGTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: SDQGKLKHQTQAKRE*AGPERGPGSSQVCQ
Trigger: CTGACAAACTTGGCTGCTCCCGGGCCCTCGTTCCGGCCCCGCGCACTCTCTTTTCGCCTGCGTTTGGTGCTTAAGTTTGCCCTGGTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509647.1
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACTGTGGCCTGCACTCTaGTCAGCAGCGTTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKLWPAL*SAAFPA
Trigger: AGCCGGGAACGCTGCTGACAAGAGTGCAGGCCACAG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCCCAGCAGGTGACGGATaGCAAACGCCTCCATTCTGG +
Preference number: 5 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLPAGDG*QTPPFW
Trigger: CCAGAATGGAGGCGTTTGCAATCCGTCACCTGCTGG...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAGTGGACACATACTGGTaGGGCGCAGCATCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKVDTYW*GAASSQ
Trigger: CTGCGAGGATGCTGCGCCCAACCAGTATGTGTCCAC...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp TTCCTTCCGCCAACCCAATGTTCCACGGCGTGGACACATACTGGTTaGGCGCAGCATCCTCGCAGTGACGTCCCCTGTACTCGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: FLPPTQCSTAWTHTG*AQHPRSDVPCTRGC
Trigger: GCAGCCACGAGTACAGGGGACGTCACTGCGAGGATGCTGCGCCCAACCAGTATGTGTCCACGCCGTGGAACATTGGGTTGGCGGAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000614102.4
CDS CCA 90 bp AGGCTGACACGTCAGAGCAGGAGGCGGTGGAGGCGTACACAGACATaGGCATGCTCTCGACAGCGGGCGCCTCGAAGTGTCTTTGATACC +
Preference number: 5 (lower is better)
Translates to: RLTRQSRRRWRRTQT*ACSRQRAPRSVFDT
Trigger: GGTATCAAAGACACTTCGAGGCGCCCGCTGTCGAGAGCATGCCCATGTCTGTGTACGCCTCCACCGCCTCCTGCTCTGACGTGTCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGGCAATCACCCCACCTaGGGGGTCATCCTCACTCAC +
Preference number: 5 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIGNHPT*GVILTH
Trigger: GTGAGTGAGGATGACCCCCAAGGTGGGGTGATTGCC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCACGGTCGTCGTGTaGACTCTGGGTGGACTGCCA +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPFTVVV*TLGGLP
Trigger: TGGCAGTCCACCCAGAGTCAACACGACGACCGTGAA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCCAGCAGGTGACGGATaGCAAACGCCTCCATTCTGG +
Preference number: 5 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRPAGDG*QTPPFW
Trigger: CCAGAATGGAGGCGTTTGCAATCCGTCACCTGCTGG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCGCCTCGAAGTGTCTTaGATACCCTGGCGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRRLEVS*IPWRVR
Trigger: CCTTACCCGCCAGGGTATCAAAGACACTTCGAGGCG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS TCA 90 bp CCTCTTCGAAGTGGCCGTCGTCCCCGCTCTCATAGTCACTCATCATaGCCTCGGACTCCACTTCGCAGCAGGCTGACACGTCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PLRSGRRPRSHSHSS*PRTPLRSRLTRQSR
Trigger: CCTGCTCTGACGTGTCAGCCTGCTGCGAAGTGGAGTCCGAGGTCATGATGAGTGACTATGAGAGCGGGGACGACGGCCACTTCGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS GCA 90 bp CTCCAGCAGGTGACGGATTGCAAACGCCTCCATTCTGGCAAGGGTTaGTGGCGCAGTCTTCCGTGGCCGTCAGGAAGCAGCCTGGAGATA +
Preference number: 5 (lower is better)
Translates to: LQQVTDCKRLHSGKG*WRSLPWPSGSSLEI
Trigger: TATCTCCAGGCTGCTTCCTGACGGCCACGGAAGACTGCGCCAGCAACCCTTGCCAGAATGGAGGCGTTTGCAATCCGTCACCTGCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATGTGCACCGTTAGCTaGGCCATGCTGCTGATGCCA +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKMCTVS*AMLLMP
Trigger: TGGCATCAGCAGCATGGCCAAGCTAACGGTGCACAT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATACGTCACGTGTCCGTaGGGCCCCAGGTCTTTATCT +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPYVTCP*GPRSLS
Trigger: AGATAAAGACCTGGGGCCCAACGGACACGTGACGTA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAGGCTCCAGGGACGGTTaGGGCTTGGAGATCCATTCA +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKGSRDG*GLEIHS
Trigger: TGAATGGATCTCCAAGCCCAAACCGTCCCTGGAGCC...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCCGTATCGATGGCGTTaGGATCTGCTGAGTACAGGG +
Preference number: 5 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRPYRWR*DLLSTG
Trigger: CCCTGTACTCAGCAGATCCAAACGCCATCGATACGG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAACCGTATCGATGGCGTTaGGATCTGCTGAGTACAGGG +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKPYRWR*DLLSTG
Trigger: CCCTGTACTCAGCAGATCCAAACGCCATCGATACGG...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS TCA 90 bp CTCATAGTCACTCATCATGACCTCGGACTCCACTTCGCAGCAGGCTaGCACGTCAGAGCAGGAGGCGGTGGAGGCGTACACAGACATGGG +
Preference number: 5 (lower is better)
Translates to: LIVTHHDLGLHFAAG*HVRAGGGGGVHRHG
Trigger: CCCATGTCTGTGTACGCCTCCACCGCCTCCTGCTCTGACGTGTCAGCCTGCTGCGAAGTGGAGTCCGAGGTCATGATGAGTGACTATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS CCA 90 bp ACACATTCGGATCCCTCAGGGCACGGATCATCTTCACAGCCATGGTaGACAGGTGGGCACCTTCCCTCTTTGCAGAGACACACCGCTGCC +
Preference number: 5 (lower is better)
Translates to: THSDPSGHGSSSQPW*TGGHLPSLQRHTAA
Trigger: GGCAGCGGTGTGTCTCTGCAAAGAGGGAAGGTGCCCACCTGTCCACCATGGCTGTGAAGATGATCCGTGCCCTGAGGGATCCGAATGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp CAGCAGGTGACGGATTGCAAACGCCTCCATTCTGGCAAGGGTTGCTaGCGCAGTCTTCCGTGGCCGTCAGGAAGCAGCCTGGAGATACAT +
Preference number: 5 (lower is better)
Translates to: QQVTDCKRLHSGKGC*RSLPWPSGSSLEIH
Trigger: ATGTATCTCCAGGCTGCTTCCTGACGGCCACGGAAGACTGCGCCAGCAACCCTTGCCAGAATGGAGGCGTTTGCAATCCGTCACCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTCGGGAATCGCAAAGTaGGCCCGAAGTGGCGACGGC +
Preference number: 5 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSSGIAK*ARSGDG
Trigger: GCCGTCGCCACTTCGGGCCAACTTTGCGATTCCCGA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATCCTGCACGGTGACGTaGTACTCGAGGTGTGTAAAC +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPSCTVT*YSRCVN
Trigger: GTTTACACACCTCGAGTACAACGTCACCGTGCAGGA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCTCGGGTGGATTATCATaGGCATCGACAACCACGACA +
Preference number: 5 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLSGGLS*ASTTTT
Trigger: TGTCGTGGTTGTCGATGCCAATGATAATCCACCCGA...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCGTCAAGGAGTCAGTaGCGCGTATGCTCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCPSRSQ*RVCSAY
Trigger: ATAAGCTGAGCATACGCGCAACTGACTCCTTGACGG...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGTGTGCTATCAGCTaGCCCCCTGTGCTGGAAACA +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPLCAIS*PPVLET
Trigger: TGTTTCCAGCACAGGGGGCAAGCTGATAGCACACAA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCGACTTCTTCCATGCCTaGTTCCCTGCTGACGGATGT +
Preference number: 5 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCDFFHA*FPADGC
Trigger: ACATCCGTCAGCAGGGAACAAGGCATGGAAGAAGTC...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp GACACACATTCGGATCCCTCAGGGCACGGATCATCTTCACAGCCATaGTGGACAGGTGGGCACCTTCCCTCTTTGCAGAGACACACCGCT +
Preference number: 5 (lower is better)
Translates to: DTHSDPSGHGSSSQP*WTGGHLPSLQRHTA
Trigger: AGCGGTGTGTCTCTGCAAAGAGGGAAGGTGCCCACCTGTCCACCATGGCTGTGAAGATGATCCGTGCCCTGAGGGATCCGAATGTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp ACACAACGATTCCAATTCCTTCCGCCAACCCAATGTTCCACGGCGTaGACACATACTGGTTGGGCGCAGCATCCTCGCAGTGACGTCCCC +
Preference number: 5 (lower is better)
Translates to: TQRFQFLPPTQCSTA*THTGWAQHPRSDVP
Trigger: GGGGACGTCACTGCGAGGATGCTGCGCCCAACCAGTATGTGTCCACGCCGTGGAACATTGGGTTGGCGGAAGGAATTGGAATCGTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000614102.4
CDS CCA 90 bp GGGCATGCTCTCGACAGCGGGCGCCTCGAAGTGTCTTTGATACCCTaGCGGGTAAGGGGCATGGGGTTCTCTACAAGTACTATTCTCACC +
Preference number: 5 (lower is better)
Translates to: GHALDSGRLEVSLIP*RVRGMGFSTSTILT
Trigger: GGTGAGAATAGTACTTGTAGAGAACCCCATGCCCCTTACCCGCCAGGGTATCAAAGACACTTCGAGGCGCCCGCTGTCGAGAGCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAAATGTCTCCCCATaGCTTAACTGTCGGGAATCG +
Preference number: 5 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCPNVSP*LNCRES
Trigger: CGATTCCCGACAGTTAAGCAATGGGGAGACATTTGG...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTACGGTCTCAAGTCATTaGTATCCAGCACCTGCACCC +
Preference number: 5 (lower is better)
Translates to: LEMASTSRGAGSSAAMPITVSSH*YPAPAP
Trigger: GGGTGCAGGTGCTGGATACAAATGACTTGAGACCGT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCATGACCACAGGTGTGTaGGGAGGAGCAAATTCACTT +
Preference number: 5 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLMTTGV*GGANSL
Trigger: AAGTGAATTTGCTCCTCCCAACACACCTGTGGTCAT...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACTTTCACCAAGACCTaGGTGGACGCTTTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLTFTKT*VDAFLS
Trigger: TGACAGAAAAGCGTCCACCAAGGTCTTGGTGAAAGT...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATCGGGTGGATTATCATaGGCATCGACAACCACGACA +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPSGGLS*ASTTTT
Trigger: TGTCGTGGTTGTCGATGCCAATGATAATCCACCCGA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAAGGGACGGTTTGGGCTaGGAGATCCATTCAATATGG +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPRDGLG*EIHSIW
Trigger: CCATATTGAATGGATCTCCAAGCCCAAACCGTCCCT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCAGTGGTGGATTATCATaGAGGTCGGTAACGTCCACC +
Preference number: 5 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCSGGLS*RSVTST
Trigger: GGTGGACGTTACCGACCTCAATGATAATCCACCACT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAGTGGTGGATTATCATaGAGGTCGGTAACGTCCACC +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKSGGLS*RSVTST
Trigger: GGTGGACGTTACCGACCTCAATGATAATCCACCACT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAACCTCCTTGGCAAGCCTaGATCCACAGCTTTCAAAGA +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKPPWQA*IHSFQR
Trigger: TCTTTGAAAGCTGTGGATCAAGGCTTGCCAAGGAGG...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCCTCCTTGGCAAGCCTaGATCCACAGCTTTCAAAGA +
Preference number: 5 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRPPWQA*IHSFQR
Trigger: TCTTTGAAAGCTGTGGATCAAGGCTTGCCAAGGAGG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATCTCGGTCGAGAAGTTaGGTCACTTTGACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKSRSRS*VTLTSP
Trigger: GGGAGAAGTCAAAGTGACCAAACTTCTCGACCGAGA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATTGGAGGAACACGGATaGACGCTTATCTCACAGTGG +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKLEEHG*TLISQW
Trigger: CCACTGTGAGATAAGCGTCAATCCGTGTTCCTCCAA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGTGGGGGAGGCAGGTTaGGCGCCACGCTGCAGACCG +
Preference number: 5 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGVGEAG*APRCRP
Trigger: CGGTCTGCAGCGTGGCGCCAAACCTGCCTCCCCCAC...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCCGGCAGAGGAACGCTaGGCATCCAATCTGATGTAT +
Preference number: 5 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIPAEER*ASNLMY
Trigger: ATACATCAGATTGGATGCCAAGCGTTCCTCTGCCGG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACCGGCAGAGGAACGCTaGGCATCCAATCTGATGTAT +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKPAEER*ASNLMY
Trigger: ATACATCAGATTGGATGCCAAGCGTTCCTCTGCCGG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACCTCTGCCGGTTTCTaGATGAAGAACCCAAGCTAC +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKTSAGF*MKNPSY
Trigger: GTAGCTTGGGTTCTTCATCAAGAAACCGGCAGAGGT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS TCA 90 bp CTACCCGCGGCAGGCATGTCTCTAGGAGGGTGGATGGATTCAAACTaGTTGCTGAATTCGGGCGGTAACGGTGGTAGCTCATCAGCTGCG +
Preference number: 5 (lower is better)
Translates to: LPAAGMSLGGWMDSN*LLNSGGNGGSSSAA
Trigger: CGCAGCTGATGAGCTACCACCGTTACCGCCCGAATTCAGCAATCAGTTTGAATCCATCCACCCTCCTAGAGACATGCCTGCCGCGGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000507105.1
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCATCCACTGTCACAATaGCATATGCTGGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIHPLSQ*HMLGPC
Trigger: ACAGGGACCCAGCATATGCAATTGTGACAGTGGATG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCACATCCTTTTCAAACTaGACTGGCCCGGCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCTSFSN*TGPALN
Trigger: GTTCAAAGCCGGGCCAGTCAAGTTTGAAAAGGATGT...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATTCTCTGCCAGCATTTaGGCAACACCAGTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKFSASI*ATPVSS
Trigger: TGAAGAGACTGGTGTTGCCAAAATGCTGGCAGAGAA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCTCACTATGTACCTCCTaGTCTTCACTCACTTCCACA +
Preference number: 5 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLSLCTS*SSLTST
Trigger: TGTGGAAGTGAGTGAAGACAAGGAGGTACATAGTGA...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGCTGCTGAAAACCTCTaGGACGAAACCACTCCAGTT +
Preference number: 5 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIAAENL*DETTPV
Trigger: AACTGGAGTGGTTTCGTCCAAGAGGTTTTCAGCAGC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAAGATGATAAACAGCTaGCTCCTCACGATCAAGGGG +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKKMINS*LLTIKG
Trigger: CCCCTTGATCGTGAGGAGCAAGCTGTTTATCATCTT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCATTCACGGTCGTCGTGTaGACTCTGGGTGGACTGCCA +
Preference number: 5 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAFTVVV*TLGGLP
Trigger: TGGCAGTCCACCCAGAGTCAACACGACGACCGTGAA...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATGTTTCTTGAGTCACTaGGAATACTCGGGGTGTAGG +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPCFLSH*EYSGCR
Trigger: CCTACACCCCGAGTATTCCAAGTGACTCAAGAAACA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGTCCTCTAGAGGCTTCTaGGAAAGACAGGGATCAAGA +
Preference number: 5 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRSSRGF*ERQGSR
Trigger: TCTTGATCCCTGTCTTTCCAAGAAGCCTCTAGAGGA...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTACCTCTGCCGGTTTCTaGATGAAGAACCCAAGCTAC +
Preference number: 5 (lower is better)
Translates to: LEMASTSRGAGSSAAMPITSAGF*MKNPSY
Trigger: GTAGCTTGGGTTCTTCATCAAGAAACCGGCAGAGGT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAAATCCCAAAAGACGTaGGGAAATGGCACAGCCGAT +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKKSQKT*GNGTAD
Trigger: ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp TCTCTGGCTTGGTCCCTGGCCTCAATCTTTAAGGAGTGCTCATGCTaGAGCTCTCGATCCAGAGGGCGTGCGATGTTAACAACACCCGTC +
Preference number: 5 (lower is better)
Translates to: SLAWSLASIFKECSC*SSRSRGRAMLTTPV
Trigger: GACGGGTGTTGTTAACATCGCACGCCCTCTGGATCGAGAGCTGCAGCATGAGCACTCCTTAAAGATTGAGGCCAGGGACCAAGCCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp AACAAAGCCTCCGTTGTCGACAACACACGTGCCCCCATAGAGGCATaGCTTGGAGGAACACGGATTGACGCTTATCTCACAGTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: NKASVVDNTRAPIEA*LGGTRIDAYLTVGP
Trigger: GGGACCCACTGTGAGATAAGCGTCAATCCGTGTTCCTCCAAGCCATGCCTCTATGGGGGCACGTGTGTTGTCGACAACGGAGGCTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000507662.1
ENST00000512347.1
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTACTTTCACCAAGACCTaGGTGGACGCTTTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: LEMASTSRGAGSSAAMPITFTKT*VDAFLS
Trigger: TGACAGAAAAGCGTCCACCAAGGTCTTGGTGAAAGT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGTAAATTCAGGGGGATaGCTATTTGCACCTAAGACT +
Preference number: 5 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLVNSGG*LFAPKT
Trigger: AGTCTTAGGTGCAAATAGCAATCCCCCTGAATTTAC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATGTGGAAAGACACCTTaGCACCTAAGCCATCCATTA +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKCGKTP*HLSHPL
Trigger: TAATGGATGGCTTAGGTGCAAAGGTGTCTTTCCACA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGGGTGTATTTGTCTGTaGTTTCACGGTCAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIGCICL*FHGQEE
Trigger: CTCCTCTTGACCGTGAAACAACAGACAAATACACCC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATCACTATGTACCTCCTaGTCTTCACTCACTTCCACA +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPSLCTS*SSLTST
Trigger: TGTGGAAGTGAGTGAAGACAAGGAGGTACATAGTGA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCATACGTCACGTGTCCGTaGGGCCCCAGGTCTTTATCT +
Preference number: 5 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAYVTCP*GPRSLS
Trigger: AGATAAAGACCTGGGGCCCAACGGACACGTGACGTA...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATGTGGTGCATTGTCATaGACATCCTCAACCTCTATG +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPCGALS*TSSTSM
Trigger: CATAGAGGTTGAGGATGTCAATGACAATGCACCACA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTTTACAGGCACATCTaGATCTCGTACCATGACCGT +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPFYRHI*ISYHDR
Trigger: ACGGTCATGGTACGAGATCAAGATGTGCCTGTAAAA...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATCGGTGGCTCTAACTaGAACAACAGACGTTCCAAT +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKIGGSN*NNRRSN
Trigger: ATTGGAACGTCTGTTGTTCAAGTTAGAGCCACCGAT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTAAGATGATAAACAGCTaGCTCCTCACGATCAAGGGG +
Preference number: 5 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIKMINS*LLTIKG
Trigger: CCCCTTGATCGTGAGGAGCAAGCTGTTTATCATCTT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACTTGCTGCATACACTaGAAGAACTTCAGTTCCAAC +
Preference number: 5 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLTCCIH*KNFSSN
Trigger: GTTGGAACTGAAGTTCTTCAAGTGTATGCAGCAAGT...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACCTATGTCTAGCTTTTaGTGTGCTATCAGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKPMSSF*CAISLP
Trigger: GGGCAAGCTGATAGCACACAAAAAGCTAGACATAGG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGTCTGTTACGCTGACATaGAGAAGGTATTGCCCTATG +
Preference number: 5 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRSVTLT*RRYCPM
Trigger: CATAGGGCAATACCTTCTCAATGTCAGCGTAACAGA...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGGAAACCATTACCAACTaGAGGACTTCTTCCATGCCT +
Preference number: 5 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRETITN*RTSSMP
Trigger: AGGCATGGAAGAAGTCCTCAAGTTGGTAATGGTTTC...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAATCAAAATACGGTCTTaGCAAGAAAGCCGTAGCGGG +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKIKIRS*QESRSG
Trigger: CCCGCTACGGCTTTCTTGCAAAGACCGTATTTTGAT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATGTTTCTTGAGTCACTaGGAATACTCGGGGTGTAGG +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKCFLSH*EYSGCR
Trigger: CCTACACCCCGAGTATTCCAAGTGACTCAAGAAACA...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp GAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCAAGATCCACCACTTTaGTGTCATAGTCAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: EMASTSRGAGSSAAMPIRQDPPL*CHSQSP
Trigger: GGGACTTTGACTATGACACAAAAGTGGTGGATCTTG...CCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAACCAGTGCCTTTTGTTaGAGGTTCAGACATATCGAG +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPTSAFC*RFRHIE
Trigger: CTCGATATGTCTGAACCTCAAACAAAAGGCACTGGT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS TCA 90 bp TGTAGCAAGGACTTCGACTTCCCGGCGGTACGGCAAGCCCCAGTCTaGTGCACGAATCCTCAGAGTATAAACCCGAGGCATCAGTTCGTA +
Preference number: 5 (lower is better)
Translates to: CSKDFDFPAVRQAPV*CTNPQSINPRHQFV
Trigger: TACGAACTGATGCCTCGGGTTTATACTCTGAGGATTCGTGCATCAGACTGGGGCTTGCCGTACCGCCGGGAAGTCGAAGTCCTTGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp CTCGCTGGAAGTTGCGCCAGTAGTCACCAACGAATTCTTCCGGAGTaGGGTTGGCAAAGCGGATCGCGATGGTGTGGTTCAACATCTCCT +
Preference number: 5 (lower is better)
Translates to: LAGSCASSHQRILPE*GWQSGSRWCGSTSP
Trigger: AGGAGATGTTGAACCACACCATCGCGATCCGCTTTGCCAACCTCACTCCGGAAGAATTCGTTGGTGACTACTGGCGCAACTTCCAGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp TCTTCTCTGGCTTGGTCCCTGGCCTCAATCTTTAAGGAGTGCTCATaGTGCAGCTCTCGATCCAGAGGGCGTGCGATGTTAACAACACCC +
Preference number: 5 (lower is better)
Translates to: SSLAWSLASIFKECS*CSSRSRGRAMLTTP
Trigger: GGGTGTTGTTAACATCGCACGCCCTCTGGATCGAGAGCTGCAGCATGAGCACTCCTTAAAGATTGAGGCCAGGGACCAAGCCAGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp CAAATACTTCAGCATGAGCGCCCGTCAAGGAGTCAGTTGCGCGTATaGTCAGCTTATATGCCGGGTGGGCCTCAAAGTCCAGAGGAGCTA +
Preference number: 5 (lower is better)
Translates to: QILQHERPSRSQLRV*SAYMPGGPQSPEEL
Trigger: TAGCTCCTCTGGACTTTGAGGCCCACCCGGCATATAAGCTGAGCATACGCGCAACTGACTCCTTGACGGGCGCTCATGCTGAAGTATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp GATGTCCACAAATACTTCAGCATGAGCGCCCGTCAAGGAGTCAGTTaGGCGTATGCTCAGCTTATATGCCGGGTGGGCCTCAAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: DVHKYFSMSARQGVS*AYAQLICRVGLKVQ
Trigger: CTGGACTTTGAGGCCCACCCGGCATATAAGCTGAGCATACGCGCAACTGACTCCTTGACGGGCGCTCATGCTGAAGTATTTGTGGACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp CGTGACAATCACATCACTGCTCAGCGTGGGCATACCACCATCAACTaGCCTCACAAAAATCGTGTGCTGCCGGGACTGCTCGTAATCCAG +
Preference number: 5 (lower is better)
Translates to: RDNHITAQRGHTTIN*PHKNRVLPGLLVIQ
Trigger: CTGGATTACGAGCAGTCCCGGCAGCACACGATTTTTGTGAGGGCAGTTGATGGTGGTATGCCCACGCTGAGCAGTGATGTGATTGTCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp CAACGACAGTGGAGAACAGCTGAGGCTCTTCTCTGGCTTGGTCCCTaGCCTCAATCTTTAAGGAGTGCTCATGCTGCAGCTCTCGATCCA +
Preference number: 5 (lower is better)
Translates to: QRQWRTAEALLWLGP*PQSLRSAHAAALDP
Trigger: TGGATCGAGAGCTGCAGCATGAGCACTCCTTAAAGATTGAGGCCAGGGACCAAGCCAGAGAAGAGCCTCAGCTGTTCTCCACTGTCGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp CCCGGGCACTGTATGGCTGGGAAGGCTTTTCCTCTAGAGGCTTCTTaGAAAGACAGGGATCAAGATCCACCACTTTTGTGGTTGGGCGCA +
Preference number: 5 (lower is better)
Translates to: PGHCMAGKAFPLEAS*KDRDQDPPLLWLGA
Trigger: TGCGCCCAACCACAAAAGTGGTGGATCTTGATCCCTGTCTTTCCAAGAAGCCTCTAGAGGAAAAGCCTTCCCAGCCATACAGTGCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507105.1
CDS-3UTR CAA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGTCTGTTCAAGTCGTaGGCTGCCATCACTGTCTCC +
Preference number: 5 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSSLFKS*AAITVS
Trigger: GGAGACAGTGATGGCAGCCAACGACTTGAACAGACT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAATGCCACCGATGGCTTaGACTTTATACTCCTTACTC +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKMPPMA*TLYSLL
Trigger: GAGTAAGGAGTATAAAGTCAAAGCCATCGGTGGCAT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAAAGTTATTTCACTCATaGGTGGACTGCCCTTATCTG +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPKLFHS*VDCPYL
Trigger: CAGATAAGGGCAGTCCACCAATGAGTGAAATAACTT...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAATAAAAACTGGCGCGTaGTCATTCTCATCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKIKTGA*SFSSCK
Trigger: CTTGCAGGATGAGAATGACAACGCGCCAGTTTTTAT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAATCTTTCACATTAATTTaGACAGAGGTAAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKSFTLI*TEVRPA
Trigger: TGCCGGCCTTACCTCTGTCAAAATTAATGTGAAAGA...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAAGGTTCTGAAAATTTaGGAAGCTGCATTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: ARPEAQDPAQPCPFGSPKKVLKI*EAAFPV
Trigger: CACCGGAAATGCAGCTTCCAAAATTTTCAGAACCTT...TTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATCTGTTACGCTGACATaGAGAAGGTATTGCCCTATG +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKSVTLT*RRYCPM
Trigger: CATAGGGCAATACCTTCTCAATGTCAGCGTAACAGA...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAACATCTCCTGTGTGACTaGTCTGATATGCACTGTGAT +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKHLLCD*SDMHCD
Trigger: ATCACAGTGCATATCAGACAAGTCACACAGGAGATG...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGGGCACCTTCCCTCTTaGCAGAGACACACCGCTGCC +
Preference number: 5 (lower is better)
Translates to: KSLEALLQRTARITHITSGHLPS*QRHTAA
Trigger: GGCAGCGGTGTGTCTCTGCAAAGAGGGAAGGTGCCC...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTGGTCCAGATTGTTTCTaGAGTCACTTGGAATACTCG +
Preference number: 5 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIGPDCF*SHLEYS
Trigger: CGAGTATTCCAAGTGACTCAAGAAACAATCTGGACC...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGGTGGGGGAGGCAGGTTaGGCGCCACGCTGCAGACCG +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPVGEAG*APRCRP
Trigger: CGGTCTGCAGCGTGGCGCCAAACCTGCCTCCCCCAC...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AGCCTCCAGGGTAATAGTCCGTATCGATGGCGTTTGGATCTGCTGAGTACAGGGCCGTATCGATGGCGTTaGGATCTGCTGAGTACAGGG +
Preference number: 5 (lower is better)
Translates to: SLQGNSPYRWRLDLLSTGPYRWR*DLLSTG
Trigger: CCCTGTACTCAGCAGATCCAAACGCCATCGATACGG...CCCTGTACTCAGCAGATCCAAACGCCATCGATACGGACTATTACCCTGGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS TCA 90 bp GCACTCTTGTCAGCAGCGTTCCCGGCTCTGTGTTTTCAAACACGGTaGTGGCATAAGGATCGGCAGAGAATTCGGGGGCGTTATCGTTCA +
Preference number: 5 (lower is better)
Translates to: ALLSAAFPALCFQTR*WHKDRQRIRGRYRS
Trigger: TGAACGATAACGCCCCCGAATTCTCTGCCGATCCTTATGCCATCACCGTGTTTGAAAACACAGAGCCGGGAACGCTGCTGACAAGAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp AGTTTCCATTCACTTCCAGGGCCACTGCGTGCCACTGCCCATCATTaGCCTGAATGCTCTGAACAGAGACAATTCCAGGGCCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: SFHSLPGPLRATAHH*PECSEQRQFQGHFH
Trigger: GTGGAAGTGGCCCTGGAATTGTCTCTGTTCAGAGCATTCAGGTCAATGATGGGCAGTGGCACGCAGTGGCCCTGGAAGTGAATGGAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp CAACACACGTGCCCCCATAGAGGCATGGCTTGGAGGAACACGGATTaGCGCTTATCTCACAGTGGGTCCCTATGTACAAGGCACTGCATT +
Preference number: 5 (lower is better)
Translates to: QHTCPHRGMAWRNTD*RLSHSGSLCTRHCI
Trigger: AATGCAGTGCCTTGTACATAGGGACCCACTGTGAGATAAGCGTCAATCCGTGTTCCTCCAAGCCATGCCTCTATGGGGGCACGTGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000507662.1
ENST00000512347.1
ENST00000614102.4
CDS GCA 90 bp GCAGAGTTCTCCTGCACGGTGACGTTGTACTCGAGGTGTGTAAACTaGAGAGGAGTCTGTTCAAGTCGTTGGCTGCCATCACTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: AEFSCTVTLYSRCVN*RGVCSSRWLPSLSP
Trigger: TGGAGACAGTGATGGCAGCCAACGACTTGAACAGACTCCTCTGCAGTTTACACACCTCGAGTACAACGTCACCGTGCAGGAGAACTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS GCA 90 bp GGCTTATGTTCCTCTGTCACTTCTACAACCACATCAAACGCCTCCTaGTGCTCACGATCGAAGGGCGTGCCAGTGGTTGACAGAACTCCT +
Preference number: 5 (lower is better)
Translates to: GLCSSVTSTTTSNAS*CSRSKGVPVVDRTP
Trigger: AGGAGTTCTGTCAACCACTGGCACGCCCTTCGATCGTGAGCAGCAGGAGGCGTTTGATGTGGTTGTAGAAGTGACAGAGGAACATAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp ATGAGCGCCCGTCAAGGAGTCAGTTGCGCGTATGCTCAGCTTATATaGCGGGTGGGCCTCAAAGTCCAGAGGAGCTATGACATTGATAAC +
Preference number: 5 (lower is better)
Translates to: MSARQGVSCAYAQLI*RVGLKVQRSYDIDN
Trigger: GTTATCAATGTCATAGCTCCTCTGGACTTTGAGGCCCACCCGGCATATAAGCTGAGCATACGCGCAACTGACTCCTTGACGGGCGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp CGGTGCCCGTGCACAGACTCGGGGTTAAAAGTGCTGAATTCGGGATaGTCTGGGATAGCAGATCCTTCGAAGGAATTTCGGTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: RCPCTDSGLKVLNSG*SGIADPSKEFRSRL
Trigger: CAATCTGGACCGAAATTCCTTCGAAGGATCTGCTATCCCAGAGCATCCCGAATTCAGCACTTTTAACCCCGAGTCTGTGCACGGGCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS CCA 90 bp CTCAGAGACTGCACTTCAGACAGGCTTTCCCGGGCACTGTATGGCTaGGAAGGCTTTTCCTCTAGAGGCTTCTTGGAAAGACAGGGATCA +
Preference number: 5 (lower is better)
Translates to: LRDCTSDRLSRALYG*EGFSSRGFLERQGS
Trigger: TGATCCCTGTCTTTCCAAGAAGCCTCTAGAGGAAAAGCCTTCCCAGCCATACAGTGCCCGGGAAAGCCTGTCTGAAGTGCAGTCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000507105.1
ENST00000512772.5
ENST00000614102.4
CDS CCA 90 bp TGCATTACGGTCACTATGGAAGCATTGTCATCGCACGATTCGGACTaGAAGGAGCTCAGAGACTGCACTTCAGACAGGCTTTCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: CITVTMEALSSHDSD*KELRDCTSDRLSRA
Trigger: TGCCCGGGAAAGCCTGTCTGAAGTGCAGTCTCTGAGCTCCTTCCAGTCCGAATCGTGCGATGACAATGCTTCCATAGTGACCGTAATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509927.1
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAACAATCCTTGCAAAGTaGCGTTTTACAGGCACATCT +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKTILAK*RFTGTS
Trigger: AGATGTGCCTGTAAAACGCAACTTTGCAAGGATTGT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCATACAAGCAAAGCATTaGAGTCTTTATCAGCATCAG +
Preference number: 5 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLIQAKH*SLYQHQ
Trigger: CTGATGCTGATAAAGACTCAAATGCTTTGCTTGTAT...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAACAGGAGGGTTATCATaGATGTCGTCTACTATGATG +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKTGGLS*MSSTMM
Trigger: CATCATAGTAGACGACATCAATGATAACCCTCCTGT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCAGGCTTCATAAATCTGTaGTTCAAAGAGTGGTGGATT +
Preference number: 5 (lower is better)
Translates to: HWKWLARPEAQDPAQPCPGFINL*FKEWWI
Trigger: AATCCACCACTCTTTGAACAACAGATTTATGAAGCC...TGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCCATCTCATGGTCATCTaGAGTGCACCTGGCCAGTAT +
Preference number: 5 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSHLMVI*SAPGQY
Trigger: ATACTGGCCAGGTGCACTCAAGATGACCATGAGATG...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGGGCAATCACCCCACCTaGGGGGTCATCCTCACTCAC +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLGNHPT*GVILTH
Trigger: GTGAGTGAGGATGACCCCCAAGGTGGGGTGATTGCC...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAATCACAAACTGGACTGTaGTCATTTGCATCCAGAACT +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKSQTGL*SFASRT
Trigger: AGTTCTGGATGCAAATGACAACAGTCCAGTTTGTGA...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCGTGTCTGGATTTAGTTaGAATTTTTCTGCACCTGAA +
Preference number: 5 (lower is better)
Translates to: MASTSRGAGSSAAMPIRLVSGFS*NFSAPE
Trigger: TTCAGGTGCAGAAAAATTCAAACTAAATCCAGACAC...GAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCTTCAATATCCCGACTaGCTGCATACACTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: LEMASTSRGAGSSAAMPILQYPD*LHTLEE
Trigger: TTCTTCAAGTGTATGCAGCAAGTCGGGATATTGAAG...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCCATTCTGGCAAGGGTaGCTGGCGCAGTCTTCCGTG +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLPFWQG*LAQSSV
Trigger: CACGGAAGACTGCGCCAGCAACCCTTGCCAGAATGG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCCCATTCTGGCAAGGGTaGCTGGCGCAGTCTTCCGTG +
Preference number: 5 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLPFWQG*LAQSSV
Trigger: CACGGAAGACTGCGCCAGCAACCCTTGCCAGAATGG...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGTGGACACATACTGGTaGGGCGCAGCATCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: KSLEALLQRTARITHITSVDTYW*GAASSQ
Trigger: CTGCGAGGATGCTGCGCCCAACCAGTATGTGTCCAC...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAATAGTTGGGGAACTCTaGTATGTCCGGCAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAIVGEL*YVRQRN
Trigger: GTTCCTCTGCCGGACATACAAGAGTTCCCCAACTAT...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCACCTCTGCCGGTTTCTaGATGAAGAACCCAAGCTAC +
Preference number: 5 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSTSAGF*MKNPSY
Trigger: GTAGCTTGGGTTCTTCATCAAGAAACCGGCAGAGGT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS TCA 90 bp GATCGGCAGAGAATTCGGGGGCGTTATCGTTCACATCTTCTAGCGTaGGCACAATACTGGCTTGGCAGAATCTTCCTCCTCCATCTGTGG +
Preference number: 5 (lower is better)
Translates to: DRQRIRGRYRSHLLA*AQYWLGRIFLLHLW
Trigger: CCACAGATGGAGGAGGAAGATTCTGCCAAGCCAGTATTGTGCTCACGCTAGAAGATGTGAACGATAACGCCCCCGAATTCTCTGCCGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp AGCACTCGTCGATATCACTCTGACACCTGCCAAGGAAGTCAGGAATaGGGAGAGACCTCTGTAGCATACGCCAGCGTATGTCAGGCTCAA +
Preference number: 5 (lower is better)
Translates to: STRRYHSDTCQGSQE*GETSVAYASVCQAQ
Trigger: TTGAGCCTGACATACGCTGGCGTATGCTACAGAGGTCTCTCCTCATTCCTGACTTCCTTGGCAGGTGTCAGAGTGATATCGACGAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507662.1
CDS CCA 90 bp GCCCTATGTCTAGCTTTTTGTGTGCTATCAGCTTGCCCCCTGTGCTaGAAACAGAGAACAGGTTGTCCATCTGAGGGTCGAGACTGTAGG +
Preference number: 5 (lower is better)
Translates to: ALCLAFCVLSACPLC*KQRTGCPSEGRDCR
Trigger: CCTACAGTCTCGACCCTCAGATGGACAACCTGTTCTCTGTTTCCAGCACAGGGGGCAAGCTGATAGCACACAAAAAGCTAGACATAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTATGTACTCTTCAGCTTaGAACAGGTTTTCACTGTCT +
Preference number: 5 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIMYSSA*NRFSLS
Trigger: AGACAGTGAAAACCTGTTCAAAGCTGAAGAGTACAT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCATGACCACAGGTGTGTaGGGAGGAGCAAATTCACTT +
Preference number: 5 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSMTTGV*GGANSL
Trigger: AAGTGAATTTGCTCCTCCCAACACACCTGTGGTCAT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCACAGGGGGATTGCTATTaGCACCTAAGACTTTCACCA +
Preference number: 5 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAQGDCY*HLRLSP
Trigger: TGGTGAAAGTCTTAGGTGCAAATAGCAATCCCCCTG...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCGCACATGATTTAAATTaGCGATACTGTATGTCACGT +
Preference number: 5 (lower is better)
Translates to: GHWKWLARPEAQDPAQPCAHDLN*RYCMSR
Trigger: ACGTGACATACAGTATCGCAAATTTAAATCATGTGC...GCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCAGGGCGTGCCAGTGGTaGACAGAACTCCTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLRACQW*TELLKC
Trigger: GCACTTCAGGAGTTCTGTCAACCACTGGCACGCCCT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTAGAGGAGCTATGACATaGATAACTCCAGTATTGAAG +
Preference number: 5 (lower is better)
Translates to: LEMASTSRGAGSSAAMPIRGAMT*ITPVLK
Trigger: CTTCAATACTGGAGTTATCAATGTCATAGCTCCTCT...AATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTCTTCCGGAGTGAGGTaGGCAAAGCGGATCGCGATG +
Preference number: 5 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLSSGVR*AKRIAM
Trigger: CATCGCGATCCGCTTTGCCAACCTCACTCCGGAAGA...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCATCAAAATACGGTCTTaGCAAGAAAGCCGTAGCGGG +
Preference number: 5 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSIKIRS*QESRSG
Trigger: CCCGCTACGGCTTTCTTGCAAAGACCGTATTTTGAT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCATCCTCTAGAGGCTTCTaGGAAAGACAGGGATCAAGA +
Preference number: 5 (lower is better)
Translates to: LTMTVVGTLEMASTSRGASSRGF*ERQGSR
Trigger: TCTTGATCCCTGTCTTTCCAAGAAGCCTCTAGAGGA...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGCCTCGAAGTGTCTTaGATACCCTGGCGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: LQRTARITHITSRFTKVRRLEVS*IPWRVR
Trigger: CCTTACCCGCCAGGGTATCAAAGACACTTCGAGGCG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS TCA 90 bp TCACCTGCCACGATGCTTAAAGATGCTATGTCACCATTGGCACCCTaGTCGCAGTCATCCACTGTCACAATTGCATATGCTGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SPATMLKDAMSPLAP*SQSSTVTIAYAGSL
Trigger: CAGGGACCCAGCATATGCAATTGTGACAGTGGATGACTGCGATCAGGGTGCCAATGGTGACATAGCATCTTTAAGCATCGTGGCAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS TCA 90 bp CCTCAGAGTATAAACCCGAGGCATCAGTTCGTAGTCCAGGTTTTCTaGCGTACTCACGGCACCAGTGAAATGGTCAATCGCAAACGGCAC +
Preference number: 5 (lower is better)
Translates to: PQSINPRHQFVVQVF*RTHGTSEMVNRKRH
Trigger: GTGCCGTTTGCGATTGACCATTTCACTGGTGCCGTGAGTACGTCAGAAAACCTGGACTACGAACTGATGCCTCGGGTTTATACTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp CCACGGGGCGTGGTCATTCGTGTCGCTGACATTGACCACAATCCTTaGAAAGTTGCGTTTTACAGGCACATCTTGATCTCGTACCATGAC +
Preference number: 5 (lower is better)
Translates to: PRGVVIRVADIDHNP*KVAFYRHILISYHD
Trigger: GTCATGGTACGAGATCAAGATGTGCCTGTAAAACGCAACTTTGCAAGGATTGTGGTCAATGTCAGCGACACGAATGACCACGCCCCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp TTATGTTCCTCTGTCACTTCTACAACCACATCAAACGCCTCCTGCTaGTCACGATCGAAGGGCGTGCCAGTGGTTGACAGAACTCCTGAA +
Preference number: 5 (lower is better)
Translates to: LCSSVTSTTTSNASC*SRSKGVPVVDRTPE
Trigger: TTCAGGAGTTCTGTCAACCACTGGCACGCCCTTCGATCGTGAGCAGCAGGAGGCGTTTGATGTGGTTGTAGAAGTGACAGAGGAACATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp GTGATACTTTCACAACGACAGTGGAGAACAGCTGAGGCTCTTCTCTaGCTTGGTCCCTGGCCTCAATCTTTAAGGAGTGCTCATGCTGCA +
Preference number: 5 (lower is better)
Translates to: VILSQRQWRTAEALL*LGPWPQSLRSAHAA
Trigger: TGCAGCATGAGCACTCCTTAAAGATTGAGGCCAGGGACCAAGCCAGAGAAGAGCCTCAGCTGTTCTCCACTGTCGTTGTGAAAGTATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp GTCATCCTCACTCACAGTCCCTTTATAGATCTCGGCCGTGAATCGTaGTGGACTATCGTTGACATCGGTGACGGTAACATCCACAATGGC +
Preference number: 5 (lower is better)
Translates to: VILTHSPFIDLGRES*WTIVDIGDGNIHNG
Trigger: GCCATTGTGGATGTTACCGTCACCGATGTCAACGATAGTCCACCACGATTCACGGCCGAGATCTATAAAGGGACTGTGAGTGAGGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp CGTTCACAGTGGCAACGTCGCTCAGTGAAGGCGTGCCTCCATCAGTaGCCTCTACTGTTAGGTAATACTCATGAGAGCTCTCATAATCCA +
Preference number: 5 (lower is better)
Translates to: RSQWQRRSVKACLHQ*PLLLGNTHESSHNP
Trigger: TGGATTATGAGAGCTCTCATGAGTATTACCTAACAGTAGAGGCCACTGATGGAGGCACGCCTTCACTGAGCGACGTTGCCACTGTGAACG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000508035.1
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACCGGAGCACATTCATaGGCCTGTTCGATGTGCACC +
Preference number: 5 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGTGAHS*ACSMCT
Trigger: GGTGCACATCGAACAGGCCAATGAATGTGCTCCGGT...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTTGACTGGCCCGGCTTaGAACTGTGGAGAAGTCACG +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLLTGPA*NCGEVT
Trigger: CGTGACTTCTCCACAGTTCAAAGCCGGGCCAGTCAA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCATGTGGAAAGACACCTTaGCACCTAAGCCATCCATTA +
Preference number: 5 (lower is better)
Translates to: LTMTVVGTLEMASTSRGACGKTP*HLSHPL
Trigger: TAATGGATGGCTTAGGTGCAAAGGTGTCTTTCCACA...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGAGGCTCTTCTCTGGCTaGGTCCCTGGCCTCAATCTT +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLRLFSG*VPGLNL
Trigger: AAGATTGAGGCCAGGGACCAAGCCAGAGAAGAGCCT...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAATTTTGTACATGAGCTaGTCATTAGAGCTCGAATCT +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKILYMS*SLELES
Trigger: AGATTCGAGCTCTAATGACAAGCTCATGTACAAAAT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCTATAGAGAGAGCCGGTaGCAGGATCAAGACGAAATT +
Preference number: 5 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSYRESR*QDQDEI
Trigger: AATTTCGTCTTGATCCTGCAACCGGCTCTCTCTATA...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCATAAAAACTGGCGCGTaGTCATTCTCATCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSIKTGA*SFSSCK
Trigger: CTTGCAGGATGAGAATGACAACGCGCCAGTTTTTAT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTAGGGCGTGCCAGTGGTaGACAGAACTCCTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTRACQW*TELLKC
Trigger: GCACTTCAGGAGTTCTGTCAACCACTGGCACGCCCT...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CACGTCCAGAGGCGCAGGATCCAGCGCAGCCATGCCCATTCGGCTCACCAAAAAACAGGGGTATTATCGTaGATATCTGTTACATTAACG +
Preference number: 5 (lower is better)
Translates to: HVQRRRIQRSHAHSAHQKTGVLS*ISVTLT
Trigger: CGTTAATGTAACAGATATCAACGATAATACCCCTGT...TTTTTGGTGAGCCGAATGGGCATGGCTGCGCTGGATCCTGCGCCTCTGGACGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCGCAGAAGTTGTTTTGTaGAGATCTGAGCACTACCTG +
Preference number: 5 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSAEVVL*RSEHYL
Trigger: CAGGTAGTGCTCAGATCTCAACAAAACAACTTCTGC...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CAGGGTAATAGTCCGTATCGATGGCGTTTGGATCTGCTGAGTACAGGGGTGTCTATAGTTGGGGAACTCTaGTATGTCCGGCAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: QGNSPYRWRLDLLSTGVSIVGEL*YVRQRN
Trigger: GTTCCTCTGCCGGACATACAAGAGTTCCCCAACTAT...AGACACCCCTGTACTCAGCAGATCCAAACGCCATCGATACGGACTATTACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS TCA 90 bp CTAATGGAGTATCGGATCTCCCCATCTCTTCTGGCGTCCTCATCATaGGCCGACACCGTCATTACCAATGAACCAACAGGTGCATCTTCT +
Preference number: 5 (lower is better)
Translates to: LMEYRISPSLLASSS*ADTVITNEPTGASS
Trigger: AGAAGATGCACCTGTTGGTTCATTGGTAATGACGGTGTCGGCTCATGATGAGGACGCCAGAAGAGATGGGGAGATCCGATACTCCATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp GAGCAGCCAAAGATTCTTCTGTGCTCACCGTGTCAACCACAGCATTaGCAAGGTGCATTACGGTCACTATGGAAGCATTGTCATCGCACG +
Preference number: 5 (lower is better)
Translates to: EQPKILLCSPCQPQH*QGALRSLWKHCHRT
Trigger: CGTGCGATGACAATGCTTCCATAGTGACCGTAATGCACCTTGTCAATGCTGTGGTTGACACGGTGAGCACAGAAGAATCTTTGGCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509927.1
CDS GCA 90 bp ATTGCCCTATGTCTAGCTTTTTGTGTGCTATCAGCTTGCCCCCTGTaGTGGAAACAGAGAACAGGTTGTCCATCTGAGGGTCGAGACTGT +
Preference number: 5 (lower is better)
Translates to: IALCLAFCVLSACPL*WKQRTGCPSEGRDC
Trigger: ACAGTCTCGACCCTCAGATGGACAACCTGTTCTCTGTTTCCAGCACAGGGGGCAAGCTGATAGCACACAAAAAGCTAGACATAGGGCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp ACACATAGTTATCCAGGTTCAGGGTTTTCAGAGTCCCTGGGGCTGTaGCCGATGCAGTATGAACTTGGTCTAGAACCAAGCGAGCATAGT +
Preference number: 5 (lower is better)
Translates to: THSYPGSGFSESLGL*PMQYELGLEPSEHS
Trigger: ACTATGCTCGCTTGGTTCTAGACCAAGTTCATACTGCATCGGGCACAGCCCCAGGGACTCTGAAAACCCTGAACCTGGATAACTATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp GGAGAAGGTCACCTGCCACGATGCTTAAAGATGCTATGTCACCATTaGCACCCTGATCGCAGTCATCCACTGTCACAATTGCATATGCTG +
Preference number: 5 (lower is better)
Translates to: GEGHLPRCLKMLCHH*HPDRSHPLSQLHML
Trigger: CAGCATATGCAATTGTGACAGTGGATGACTGCGATCAGGGTGCCAATGGTGACATAGCATCTTTAAGCATCGTGGCAGGTGACCTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CCA 90 bp ATCCTCACTCACAGTCCCTTTATAGATCTCGGCCGTGAATCGTGGTaGACTATCGTTGACATCGGTGACGGTAACATCCACAATGGCTGT +
Preference number: 5 (lower is better)
Translates to: ILTHSPFIDLGRESW*TIVDIGDGNIHNGC
Trigger: ACAGCCATTGTGGATGTTACCGTCACCGATGTCAACGATAGTCCACCACGATTCACGGCCGAGATCTATAAAGGGACTGTGAGTGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp ACGAATTCTTCCGGAGTGAGGTTGGCAAAGCGGATCGCGATGGTGTaGTTCAACATCTCCTGTGTGACTTGTCTGATATGCACTGTGATG +
Preference number: 5 (lower is better)
Translates to: TNSSGVRLAKRIAMV*FNISCVTCLICTVM
Trigger: CATCACAGTGCATATCAGACAAGTCACACAGGAGATGTTGAACCACACCATCGCGATCCGCTTTGCCAACCTCACTCCGGAAGAATTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp CCCGTGCACAGACTCGGGGTTAAAAGTGCTGAATTCGGGATGCTCTaGGATAGCAGATCCTTCGAAGGAATTTCGGTCCAGATTGTTTCT +
Preference number: 5 (lower is better)
Translates to: PVHRLGVKSAEFGML*DSRSFEGISVQIVS
Trigger: AGAAACAATCTGGACCGAAATTCCTTCGAAGGATCTGCTATCCCAGAGCATCCCGAATTCAGCACTTTTAACCCCGAGTCTGTGCACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS CCA 90 bp CCCGGGCACTGTATGGCTGGGAAGGCTTTTCCTCTAGAGGCTTCTTaGAAAGACAGGGATCAAGATCCACCACTTTTGTGTCATAGTCAA +
Preference number: 5 (lower is better)
Translates to: PGHCMAGKAFPLEAS*KDRDQDPPLLCHSQ
Trigger: TTGACTATGACACAAAAGTGGTGGATCTTGATCCCTGTCTTTCCAAGAAGCCTCTAGAGGAAAAGCCTTCCCAGCCATACAGTGCCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTCCTGCACGGTGACGTaGTACTCGAGGTGTGTAAAC +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLSCTVT*YSRCVN
Trigger: GTTTACACACCTCGAGTACAACGTCACCGTGCAGGA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCACGGTCTCAAGTCATTaGTATCCAGCACCTGCACCC +
Preference number: 5 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLTVSSH*YPAPAP
Trigger: GGGTGCAGGTGCTGGATACAAATGACTTGAGACCGT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTACCGGAGCACATTCATaGGCCTGTTCGATGTGCACC +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTTGAHS*ACSMCT
Trigger: GGTGCACATCGAACAGGCCAATGAATGTGCTCCGGT...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCGTGGTGGACTATCGTaGACATCGGTGACGGTAACA +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLRGGLS*TSVTVT
Trigger: TGTTACCGTCACCGATGTCAACGATAGTCCACCACG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTCGTGGTGGACTATCGTaGACATCGGTGACGGTAACA +
Preference number: 5 (lower is better)
Translates to: KSLEALLQRTARITHITSRGGLS*TSVTVT
Trigger: TGTTACCGTCACCGATGTCAACGATAGTCCACCACG...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTGTGTGCTATCAGCTaGCCCCCTGTGCTGGAAACA +
Preference number: 5 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLLCAIS*PPVLET
Trigger: TGTTTCCAGCACAGGGGGCAAGCTGATAGCACACAA...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCGGGCACCTTCCCTCTTaGCAGAGACACACCGCTGCC +
Preference number: 5 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPGHLPS*QRHTAA
Trigger: GGCAGCGGTGTGTCTCTGCAAAGAGGGAAGGTGCCC...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTCAAACAAAGCCTCCGTaGTCGACAACACACGTGCCC +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTQTKPP*STTHVP
Trigger: GGGCACGTGTGTTGTCGACAACGGAGGCTTTGTTTG...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTCACGATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGAATTTCGGTCCAGATaGTTTCTTGAGTCACTTGGA +
Preference number: 5 (lower is better)
Translates to: LTMTVVGTLEMASTSRGAEFRSR*FLESLG
Trigger: TCCAAGTGACTCAAGAAACAATCTGGACCGAAATTC...TGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCATCGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCCGGCAGAGGAACGCTaGGCATCCAATCTGATGTAT +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLPAEER*ASNLMY
Trigger: ATACATCAGATTGGATGCCAAGCGTTCCTCTGCCGG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACCGTATCGATGGCGTTaGGATCTGCTGAGTACAGGG +
Preference number: 5 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSPYRWR*DLLSTG
Trigger: CCCTGTACTCAGCAGATCCAAACGCCATCGATACGG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS TCA 90 bp TGGGATAGCAGATCCTTCGAAGGAATTTCGGTCCAGATTGTTTCTTaGGTCACTTGGAATACTCGGGGTGTAGGAAATAGGCCGGACAGG +
Preference number: 5 (lower is better)
Translates to: WDSRSFEGISVQIVS*VTWNTRGVGNRPDR
Trigger: CCTGTCCGGCCTATTTCCTACACCCCGAGTATTCCAAGTGACTCAAGAAACAATCTGGACCGAAATTCCTTCGAAGGATCTGCTATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS GCA 90 bp AGAATCGGTGGCTCTAACTTGAACAACAGACGTTCCAATTACAGATaGCTCAGACAGGGTCACCGCATAAGACTGCTGAGCAAACACAGG +
Preference number: 5 (lower is better)
Translates to: RIGGSNLNNRRSNYR*LRQGHRIRLLSKHR
Trigger: CCTGTGTTTGCTCAGCAGTCTTATGCGGTGACCCTGTCTGAGGCATCTGTAATTGGAACGTCTGTTGTTCAAGTTAGAGCCACCGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp ACCGTCGTGAACTTCCCATCTGTTACGCTGACATTGAGAAGGTATTaGCCTATGTCTAGCTTTTTGTGTGCTATCAGCTTGCCCCCTGTG +
Preference number: 5 (lower is better)
Translates to: TVVNFPSVTLTLRRY*PMSSFLCAISLPPV
Trigger: CACAGGGGGCAAGCTGATAGCACACAAAAAGCTAGACATAGGGCAATACCTTCTCAATGTCAGCGTAACAGATGGGAAGTTCACGACGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp CCAATCAATGCCACCGATGGCTTTGACTTTATACTCCTTACTCCCTaGAAAGGACCTCACTGTTCTAAACTGCTGGAGAAGGTCACCTGC +
Preference number: 5 (lower is better)
Translates to: PINATDGFDFILLTP*KGPHCSKLLEKVTC
Trigger: GCAGGTGACCTTCTCCAGCAGTTTAGAACAGTGAGGTCCTTTCCAGGGAGTAAGGAGTATAAAGTCAAAGCCATCGGTGGCATTGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCATCCACTGTCACAATaGCATATGCTGGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: LQRTARITHITSRFTKVRHPLSQ*HMLGPC
Trigger: ACAGGGACCCAGCATATGCAATTGTGACAGTGGATG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGGCTTTCCCTTGTCTTaGGCCCTCACAGTGAGATTA +
Preference number: 5 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGGFPLS*ALTVRL
Trigger: TAATCTCACTGTGAGGGCCAAAGACAAGGGAAAGCC...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTATGGAGTCTGGTGGTaGATGACTTTTGAGGGCGAC +
Preference number: 5 (lower is better)
Translates to: KSLEALLQRTARITHITSYGVWW*MTFEGD
Trigger: GTCGCCCTCAAAAGTCATCAACCACCAGACTCCATA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGAGGGACGGTTTGGGCTaGGAGATCCATTCAATATGG +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLRDGLG*EIHSIW
Trigger: CCATATTGAATGGATCTCCAAGCCCAAACCGTCCCT...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATGGCTCCAGGGACGGTTaGGGCTTGGAGATCCATTCA +
Preference number: 5 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADGSRDG*GLEIHS
Trigger: TGAATGGATCTCCAAGCCCAAACCGTCCCTGGAGCC...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCAGAGGAGCTATGACATaGATAACTCCAGTATTGAAG +
Preference number: 5 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSRGAMT*ITPVLK
Trigger: CTTCAATACTGGAGTTATCAATGTCATAGCTCCTCT...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACCGTCAAGGAGTCAGTaGCGCGTATGCTCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSPSRSQ*RVCSAY
Trigger: ATAAGCTGAGCATACGCGCAACTGACTCCTTGACGG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATGACAGTAGTTGGGACACTGGAAATGGCTAGCACGTCCAGAGGCGCAGGATCCGAACAACAGATTCTTTaGATGGAGACCCATTATCCA +
Preference number: 5 (lower is better)
Translates to: MTVVGTLEMASTSRGAGSEQQIL*METHYP
Trigger: TGGATAATGGGTCTCCATCAAAAGAATCTGTTGTTC...GGATCCTGCGCCTCTGGACGTGCTAGCCATTTCCAGTGTCCCAACTACTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTGAGCACAATACTGGCTaGGCAGAATCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTEHNTG*AESSSS
Trigger: GGAGGAGGAAGATTCTGCCAAGCCAGTATTGTGCTC...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTCTCGGTCGAGAAGTTaGGTCACTTTGACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: KSLEALLQRTARITHITSSRSRS*VTLTSP
Trigger: GGGAGAAGTCAAAGTGACCAAACTTCTCGACCGAGA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGGCCATTATCAGAAGCTaGAACCGTGAGCGTGTAACC +
Preference number: 5 (lower is better)
Translates to: LQRTARITHITSRFTKVRAIIRS*NRERVT
Trigger: GGTTACACGCTCACGGTTCAAGCTTCTGATAATGGC...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTGTCAGGAGGACTCCTaGCGGGTTAACTTCAAAAGC +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLCQEDS*RVNFKS
Trigger: GCTTTTGAAGTTAACCCGCAAGGAGTCCTCCTGACA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTCTTCCGGAGTGAGGTaGGCAAAGCGGATCGCGATG +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPSSGVR*AKRIAM
Trigger: CATCGCGATCCGCTTTGCCAACCTCACTCCGGAAGA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGGAGGAAAATCACTTTCGATGTCGTAGCCTCCAGGGTAATAGTCCGTATCGATCCGGCAGAGGAACGCTaGGCATCCAATCTGATGTAT +
Preference number: 5 (lower is better)
Translates to: WRKITFDVVASRVIVRIDPAEER*ASNLMY
Trigger: ATACATCAGATTGGATGCCAAGCGTTCCTCTGCCGG...ATCGATACGGACTATTACCCTGGAGGCTACGACATCGAAAGTGATTTTCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR CAA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCATAGTTGGGGAACTCTaGTATGTCCGGCAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGIVGEL*YVRQRN
Trigger: GTTCCTCTGCCGGACATACAAGAGTTCCCCAACTAT...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATCGCCTCGAAGTGTCTTaGATACCCTGGCGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADRLEVS*IPWRVR
Trigger: CCTTACCCGCCAGGGTATCAAAGACACTTCGAGGCG...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp CGTGTCCGTTGGGCCCCAGGTCTTTATCTGTGGCTTCAACCTGGATaGTTTCACTATGTACCTCCTTGTCTTCACTCACTTCCACAAAAT +
Preference number: 5 (lower is better)
Translates to: RVRWAPGLYLWLQPG*FHYVPPCLHSLPQN
Trigger: ATTTTGTGGAAGTGAGTGAAGACAAGGAGGTACATAGTGAAATCATCCAGGTTGAAGCCACAGATAAAGACCTGGGGCCCAACGGACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp ATCTCTTCTGGCGTCCTCATCATGAGCCGACACCGTCATTACCAATaGACCAACAGGTGCATCTTCTTTCACTGTCCCCTTTTCCACAAA +
Preference number: 5 (lower is better)
Translates to: ISSGVLIMSRHRHYQ*TNRCIFFHCPLFHK
Trigger: TTTGTGGAAAAGGGGACAGTGAAAGAAGATGCACCTGTTGGTTCATTGGTAATGACGGTGTCGGCTCATGATGAGGACGCCAGAAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp AGGCATGGCTTTATTCATGACAGTGATCGGAACGATAACTTCCGCTaGAAAGGCCGGGTTCCCTCCATCTTTTGCAACCACTGTAACAAG +
Preference number: 5 (lower is better)
Translates to: RHGFIHDSDRNDNFR*KGRVPSIFCNHCNK
Trigger: CTTGTTACAGTGGTTGCAAAAGATGGAGGGAACCCGGCCTTTTCAGCGGAAGTTATCGTTCCGATCACTGTCATGAATAAAGCCATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp AAGAAAGCCGTAGCGGGTCCCAGGTGCTTGTCTTTAGGTTCAGCCTaGTGCTTCTTTTTCCGACTAATCATCTTACGGCAGAGAACAAAC +
Preference number: 5 (lower is better)
Translates to: KKAVAGPRCLSLGSA*CFFFRLIILRQRTN
Trigger: GTTTGTTCTCTGCCGTAAGATGATTAGTCGGAAAAAGAAGCATCAGGCTGAACCTAAAGACAAGCACCTGGGACCCGCTACGGCTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000614102.4
CDS GCA 90 bp AATGTAAACACCCATCTTGACAGGATGCCCCACATAAGTCTTAGCTaGAGAGTTCTCCTGCACGGTGACGTTGTACTCGAGGTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: NVNTHLDRMPHISLS*RVLLHGDVVLEVCK
Trigger: TTTACACACCTCGAGTACAACGTCACCGTGCAGGAGAACTCTGCAGCTAAGACTTATGTGGGGCATCCTGTCAAGATGGGTGTTTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CCA 90 bp TTGTACTCGAGGTGTGTAAACTGCAGAGGAGTCTGTTCAAGTCGTTaGCTGCCATCACTGTCTCCAAAATGTTGGAAGAGAAGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: LYSRCVNCRGVCSSR*LPSLSPKCWKRRSR
Trigger: TCTGCTCCTTCTCTTCCAACATTTTGGAGACAGTGATGGCAGCCAACGACTTGAACAGACTCCTCTGCAGTTTACACACCTCGAGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CCA 90 bp TCATCGCAGAACTTCCAGGGGCAGTCCAGTCCCGCGCAGAGTTTCTaGAATACATTCAGTATCCTAACTCCAATGATTTCCTCAATGTCA +
Preference number: 5 (lower is better)
Translates to: SSQNFQGQSSPAQSF*NTFSILTPMISSMS
Trigger: TGACATTGAGGAAATCATTGGAGTTAGGATACTGAATGTATTCCAGAAACTCTGCGCGGGACTGGACTGCCCCTGGAAGTTCTGCGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp AGCCTGGAGATACATCCACCGACTCTTCGATGTGTGCATAGCTTCTaGGTTTGCTGTTTAAAGGGAGCTCCTGCCCATTCAAATAAATGG +
Preference number: 5 (lower is better)
Translates to: SLEIHPPTLRCVHSF*VCCLKGAPAHSNKW
Trigger: CCATTTATTTGAATGGGCAGGAGCTCCCTTTAAACAGCAAACCCAGAAGCTATGCACACATCGAAGAGTCGGTGGATGTATCTCCAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCAGGGGGATTGCTATTaGCACCTAAGACTTTCACCA +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLQGDCY*HLRLSP
Trigger: TGGTGAAAGTCTTAGGTGCAAATAGCAATCCCCCTG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTCCGTCACGCTGTCAATaGAAAATGTGTCTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: KSLEALLQRTARITHITSPSRCQ*KMCLCL
Trigger: CAGACACAGACACATTTTCAATTGACAGCGTGACGG...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGAGGCTCTTCTCTGGCTaGGTCCCTGGCCTCAATCTT +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPRLFSG*VPGLNL
Trigger: AAGATTGAGGCCAGGGACCAAGCCAGAGAAGAGCCT...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGGATGTCTGTGGTGCATaGTCATTGACATCCTCAACC +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLDVCGA*SLTSST
Trigger: GGTTGAGGATGTCAATGACAATGCACCACAGACATC...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTTCGTGTCGCTGACATaGACCACAATCCTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LQRTARITHITSRFTKVRFVSLT*TTILAK
Trigger: CTTTGCAAGGATTGTGGTCAATGTCAGCGACACGAA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTACATAACTTGGCCGTaGGTTCCTGAGTCAGCATCA +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLYITWP*VPESAS
Trigger: TGATGCTGACTCAGGAACCAACGGCCAAGTTATGTA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTACATAACTTGGCCGTaGGTTCCTGAGTCAGCATCA +
Preference number: 5 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGYITWP*VPESAS
Trigger: TGATGCTGACTCAGGAACCAACGGCCAAGTTATGTA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTGCCATTATCAGAAGCTaGAACCGTGAGCGTGTAACC +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTAIIRS*NRERVT
Trigger: GGTTACACGCTCACGGTTCAAGCTTCTGATAATGGC...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCATTGGAGGAACACGGATaGACGCTTATCTCACAGTGG +
Preference number: 5 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSLEEHG*TLISQW
Trigger: CCACTGTGAGATAAGCGTCAATCCGTGTTCCTCCAA...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGCAAACAAAGCCTCCGTaGTCGACAACACACGTGCCC +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPQTKPP*STTHVP
Trigger: GGGCACGTGTGTTGTCGACAACGGAGGCTTTGTTTG...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGTTTCTTGAGTCACTaGGAATACTCGGGGTGTAGG +
Preference number: 5 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLCFLSH*EYSGCR
Trigger: CCTACACCCCGAGTATTCCAAGTGACTCAAGAAACA...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTCCTCTAGAGGCTTCTaGGAAAGACAGGGATCAAGA +
Preference number: 5 (lower is better)
Translates to: LQRTARITHITSRFTKVRSSRGF*ERQGSR
Trigger: TCTTGATCCCTGTCTTTCCAAGAAGCCTCTAGAGGA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTATAGTTGGGGAACTCTaGTATGTCCGGCAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTIVGEL*YVRQRN
Trigger: GTTCCTCTGCCGGACATACAAGAGTTCCCCAACTAT...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGAAATCCCAAAAGACGTaGGGAAATGGCACAGCCGAT +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLKSQKT*GNGTAD
Trigger: ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTT...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGCAGCCAAAGATTCATaGTCATCGCACGATTCGGAC +
Preference number: 5 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSAAKDS*SSHDSD
Trigger: GTCCGAATCGTGCGATGACAATGAATCTTTGGCTGC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512772.5
CDS TCA 90 bp TTAACATCTTCTAGTGATACTTTCACAACGACAGTGGAGAACAGCTaGGGCTCTTCTCTGGCTTGGTCCCTGGCCTCAATCTTTAAGGAG +
Preference number: 5 (lower is better)
Translates to: LTSSSDTFTTTVENS*GSSLAWSLASIFKE
Trigger: CTCCTTAAAGATTGAGGCCAGGGACCAAGCCAGAGAAGAGCCTCAGCTGTTCTCCACTGTCGTTGTGAAAGTATCACTAGAAGATGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp GATAGTGGTGGTTCCATCTGTAGCCTCGACTGTGAGGTTGTAGTTTaGCTTCTGTTCTGCATCAAGAGGTTTGGCAACAATGATGGTTCC +
Preference number: 5 (lower is better)
Translates to: DSGGSICSLDCEVVV*LLFCIKRFGNNDGS
Trigger: GGAACCATCATTGTTGCCAAACCTCTTGATGCAGAACAGAAGTCAAACTACAACCTCACAGTCGAGGCTACAGATGGAACCACCACTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp CAGGTTAAGACTGTAAAATGGCTTCAGGGCGTGCCGGTGCAGGTTTaGGAGGGTGATAATCCCTGTTGCACTGTCAATGACAAAATGTTT +
Preference number: 5 (lower is better)
Translates to: QVKTVKWLQGVPVQV*EGDNPCCTVNDKMF
Trigger: AAACATTTTGTCATTGACAGTGCAACAGGGATTATCACCCTCTCAAACCTGCACCGGCACGCCCTGAAGCCATTTTACAGTCTTAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp TCTGTAAACATCCTTTTCAAACTTGACTGGCCCGGCTTTGAACTGTaGAGAAGTCACGTGAATGACTTTAACAGAAGAGAACTGGGGCGG +
Preference number: 5 (lower is better)
Translates to: SVNILFKLDWPGFEL*RSHVNDFNRRELGR
Trigger: CCGCCCCAGTTCTCTTCTGTTAAAGTCATTCACGTGACTTCTCCACAGTTCAAAGCCGGGCCAGTCAAGTTTGAAAAGGATGTTTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTCTCCGGAAACAATTTaGTACCTTACTTCCCACGCT +
Preference number: 5 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLSPETI*YLTSHA
Trigger: AGCGTGGGAAGTAAGGTACAAAATTGTTTCCGGAGA...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTACATCCTTTTCAAACTaGACTGGCCCGGCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTTSFSN*TGPALN
Trigger: GTTCAAAGCCGGGCCAGTCAAGTTTGAAAAGGATGT...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGTGGTGCATTGTCATaGACATCCTCAACCTCTATG +
Preference number: 5 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLCGALS*TSSTSM
Trigger: CATAGAGGTTGAGGATGTCAATGACAATGCACCACA...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTTCTGCATCAAGAGGTTaGGCAACAATGATGGTTCCA +
Preference number: 5 (lower is better)
Translates to: KSLEALLQRTARITHITSSASRG*ATMMVP
Trigger: TGGAACCATCATTGTTGCCAAACCTCTTGATGCAGA...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTCGTGTCGCTGACATaGACCACAATCCTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTFVSLT*TTILAK
Trigger: CTTTGCAAGGATTGTGGTCAATGTCAGCGACACGAA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAAACTTCGGAGAGGCGTaGTCAGCAATTGTGACAAAG +
Preference number: 5 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSNFGEA*SAIVTK
Trigger: CTTTGTCACAATTGCTGACAACGCCTCTCCGAAGTT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGGAGCACAATACTGGCTaGGCAGAATCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPEHNTG*AESSSS
Trigger: GGAGGAGGAAGATTCTGCCAAGCCAGTATTGTGCTC...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACCTATGTCTAGCTTTTaGTGTGCTATCAGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSPMSSF*CAISLP
Trigger: GGGCAAGCTGATAGCACACAAAAAGCTAGACATAGG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGAAACCATTACCAACTaGAGGACTTCTTCCATGCCT +
Preference number: 5 (lower is better)
Translates to: KSLEALLQRTARITHITSETITN*RTSSMP
Trigger: AGGCATGGAAGAAGTCCTCAAGTTGGTAATGGTTTC...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCAAGATCCACCACTTTaGTGTCATAGTCAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLQDPPL*CHSQSP
Trigger: GGGACTTTGACTATGACACAAAAGTGGTGGATCTTG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCAAGATCCACCACTTTaGTGTCATAGTCAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: LQRTARITHITSRFTKVRQDPPL*CHSQSP
Trigger: GGGACTTTGACTATGACACAAAAGTGGTGGATCTTG...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCACCAGTGCCTTTTGTTaGAGGTTCAGACATATCGAG +
Preference number: 5 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLTSAFC*RFRHIE
Trigger: CTCGATATGTCTGAACCTCAAACAAAAGGCACTGGT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS TCA 90 bp TTTTCAAACTTGACTGGCCCGGCTTTGAACTGTGGAGAAGTCACGTaGATGACTTTAACAGAAGAGAACTGGGGCGGAGTTCCTTTATCT +
Preference number: 5 (lower is better)
Translates to: FSNLTGPALNCGEVT*MTLTEENWGGVPLS
Trigger: AGATAAAGGAACTCCGCCCCAGTTCTCTTCTGTTAAAGTCATTCACGTGACTTCTCCACAGTTCAAAGCCGGGCCAGTCAAGTTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS TCA 90 bp GCATCAGTTCGTAGTCCAGGTTTTCTGACGTACTCACGGCACCAGTaGAATGGTCAATCGCAAACGGCACATGATTTAAATTTGCGATAC +
Preference number: 5 (lower is better)
Translates to: ASVRSPGFLTYSRHQ*NGQSQTAHDLNLRY
Trigger: GTATCGCAAATTTAAATCATGTGCCGTTTGCGATTGACCATTTCACTGGTGCCGTGAGTACGTCAGAAAACCTGGACTACGAACTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp GGTTGTAGTTTGACTTCTGTTCTGCATCAAGAGGTTTGGCAACAATaGTGGTTCCAGTTCCCTTGTCCACATCGAAGTGACTGTCGTAGT +
Preference number: 5 (lower is better)
Translates to: GCSLTSVLHQEVWQQ*WFQFPCPHRSDCRS
Trigger: ACTACGACAGTCACTTCGATGTGGACAAGGGAACTGGAACCATCATTGTTGCCAAACCTCTTGATGCAGAACAGAAGTCAAACTACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp GAGATTCCTCTATTTGGTTCTGAATCAGAATCGGTGGCTCTAACTTaGACAACAGACGTTCCAATTACAGATGCCTCAGACAGGGTCACC +
Preference number: 5 (lower is better)
Translates to: EIPLFGSESESVALT*TTDVPITDASDRVT
Trigger: GGTGACCCTGTCTGAGGCATCTGTAATTGGAACGTCTGTTGTTCAAGTTAGAGCCACCGATTCTGATTCAGAACCAAATAGAGGAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp GCACTACCTGGTTTCTCTACAAAAAGTAAGACGTCCAGATGTGGGTaGGGTTCAGAGGACTGCAAACTAACAATCTGTATGTCGTTCCTC +
Preference number: 5 (lower is better)
Translates to: ALPGFSTKSKTSRCG*GSEDCKLTICMSFL
Trigger: GAGGAACGACATACAGATTGTTAGTTTGCAGTCCTCTGAACCTCACCCACATCTGGACGTCTTACTTTTTGTAGAGAAACCAGGTAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp ACTTTATACTCCTTACTCCCTGGAAAGGACCTCACTGTTCTAAACTaGTGGAGAAGGTCACCTGCCACGATGCTTAAAGATGCTATGTCA +
Preference number: 5 (lower is better)
Translates to: TLYSLLPGKDLTVLN*WRRSPATMLKDAMS
Trigger: TGACATAGCATCTTTAAGCATCGTGGCAGGTGACCTTCTCCAGCAGTTTAGAACAGTGAGGTCCTTTCCAGGGAGTAAGGAGTATAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS GCA 90 bp AAGAAAATATCCTCCACCTCTCCCTGGTTGTGTAATTTATTTGCCTaGAGGAGCTTCTCTGCCAGCATTTTGGCAACACCAGTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: KKISSTSPWLCNLFA*RSFSASILATPVSS
Trigger: TGAAGAGACTGGTGTTGCCAAAATGCTGGCAGAGAAGCTCCTGCAGGCAAATAAATTACACAACCAGGGAGAGGTGGAGGATATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp GTAATTTCAGCGTTAGAGCGGATGTCTGCGTCTGTAGCAGAGATCTaGATGATCAATTTTCCAGGAAGGACGTCTTCAGGAATAGTGTCT +
Preference number: 5 (lower is better)
Translates to: VISALERMSASVAEI*MINFPGRTSSGIVS
Trigger: AGACACTATTCCTGAAGACGTCCTTCCTGGAAAATTGATCATGCAGATCTCTGCTACAGACGCAGACATCCGCTCTAACGCTGAAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp GGTGTGGCAAAATTTTCTCCATCTGTAGCTGTGATTCTCAGACTGTaGAAAGACACCTTTGCACCTAAGCCATCCATTAGCGATCGCTTT +
Preference number: 5 (lower is better)
Translates to: GVAKFSPSVAVILRL*KDTFAPKPSISDRF
Trigger: AAAGCGATCGCTAATGGATGGCTTAGGTGCAAAGGTGTCTTTCCACAGTCTGAGAATCACAGCTACAGATGGAGAAAATTTTGCCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATCCAAATGTCTCCCCATaGCTTAACTGTCGGGAATCG +
Preference number: 5 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADPNVSP*LNCRES
Trigger: CGATTCCCGACAGTTAAGCAATGGGGAGACATTTGG...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTATGCCACCGATGGCTTaGACTTTATACTCCTTACTC +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTMPPMA*TLYSLL
Trigger: GAGTAAGGAGTATAAAGTCAAAGCCATCGGTGGCAT...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTCATCAAAAGCAGCTTaGTACGCTGTCTGGGTAAAT +
Preference number: 5 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGSSKAA*YAVWVN
Trigger: ATTTACCCAGACAGCGTACAAAGCTGCTTTTGATGA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGGGCTTTCCCTTGTCTTaGGCCCTCACAGTGAGATTA +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPGFPLS*ALTVRL
Trigger: TAATCTCACTGTGAGGGCCAAAGACAAGGGAAAGCC...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTGTCTCTTCACCTATTTaGAAAACACCAACGCCAGAG +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTVSSPI*KTPTPE
Trigger: CTCTGGCGTTGGTGTTTTCAAAATAGGTGAAGAGAC...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTTCGATGAAAAATTaGCCATGCTCATTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSGSMKN*PCSFPS
Trigger: AGACGGGAATGAGCATGGCAAATTTTTCATCGAACC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTGGTTCGATGAAAAATTaGCCATGCTCATTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTGSMKN*PCSFPS
Trigger: AGACGGGAATGAGCATGGCAAATTTTTCATCGAACC...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCATTTTACAGGCACATCTaGATCTCGTACCATGACCGT +
Preference number: 5 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSFYRHI*ISYHDR
Trigger: ACGGTCATGGTACGAGATCAAGATGTGCCTGTAAAA...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACAATCCTTGCAAAGTaGCGTTTTACAGGCACATCT +
Preference number: 5 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGTILAK*RFTGTS
Trigger: AGATGTGCCTGTAAAACGCAACTTTGCAAGGATTGT...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTCCCATGTCATGCACTaGGACGGTAAAGTGAAAAAT +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLSHVMH*DGKVKN
Trigger: ATTTTTCACTTTACCGTCCAAGTGCATGACATGGGA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCACAGGAGGGTTATCATaGATGTCGTCTACTATGATG +
Preference number: 5 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLTGGLS*MSSTMM
Trigger: CATCATAGTAGACGACATCAATGATAACCCTCCTGT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGTTTGGTTGCTCGAAATaGTGGTGCATTGTCATTGTC +
Preference number: 5 (lower is better)
Translates to: LQRTARITHITSRFTKVRFGCSK*WCIVIV
Trigger: GACAATGACAATGCACCACAATTTCGAGCAACCAAA...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTTTGGTTGCTCGAAATaGTGGTGCATTGTCATTGTC +
Preference number: 5 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGFGCSK*WCIVIV
Trigger: GACAATGACAATGCACCACAATTTCGAGCAACCAAA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTAAGGACTCATCCCTATaGCTTTCTGGAGTATTCCCT +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTKDSSL*LSGVFP
Trigger: AGGGAATACTCCAGAAAGCAATAGGGATGAGTCCTT...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGCATCTCATGGTCATCTaGAGTGCACCTGGCCAGTAT +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPHLMVI*SAPGQY
Trigger: ATACTGGCCAGGTGCACTCAAGATGACCATGAGATG...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTCAAAGACCGGGCTGTaGTCATTTGCATCTTTCACT +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTSKTGL*SFASFT
Trigger: AGTGAAAGATGCAAATGACAACAGCCCGGTCTTTGA...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTGTCGTGTAGGTGTCTaGGCTGAACACAGGGGTATT +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPCRVGV*AEHRGI
Trigger: AATACCCCTGTGTTCAGCCAAGACACCTACACGACA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGTGTGCAGAAGTTGTTTaGTTGAGATCTGAGCACTAC +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLCAEVV*LRSEHY
Trigger: GTAGTGCTCAGATCTCAACAAAACAACTTCTGCACA...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTGGTCCAGATTGTTTCTaGAGTCACTTGGAATACTCG +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTGPDCF*SHLEYS
Trigger: CGAGTATTCCAAGTGACTCAAGAAACAATCTGGACC...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGGAATTTCGGTCCAGATaGTTTCTTGAGTCACTTGGA +
Preference number: 5 (lower is better)
Translates to: LQRTARITHITSRFTKVREFRSR*FLESLG
Trigger: TCCAAGTGACTCAAGAAACAATCTGGACCGAAATTC...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTCTCACCAGTGCCTTTaGTTTGAGGTTCAGACATAT +
Preference number: 5 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGSHQCL*FEVQTY
Trigger: ATATGTCTGAACCTCAAACAAAAGGCACTGGTGAGA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCTGTGTCATGGTGGTTTaGGTTCTAAACAGGTATGCA +
Preference number: 5 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGCVMVV*VLNRYA
Trigger: TGCATACCTGTTTAGAACCAAAACCACCATGACACA...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp TTATCATTGATGTCGTCTACTATGATGTCCACAAATACTTCAGCATaGGCGCCCGTCAAGGAGTCAGTTGCGCGTATGCTCAGCTTATAT +
Preference number: 5 (lower is better)
Translates to: LSLMSSTMMSTNTSA*APVKESVARMLSLY
Trigger: ATATAAGCTGAGCATACGCGCAACTGACTCCTTGACGGGCGCTCATGCTGAAGTATTTGTGGACATCATAGTAGACGACATCAATGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp TCCATGTTAATGGCAAAGGATTCAATGACTTCCACACTTTGTGACTaGTCCAGGCTATACATAACTTGGCCGTTGGTTCCTGAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: SMLMAKDSMTSTLCD*SRLYITWPLVPESA
Trigger: TGCTGACTCAGGAACCAACGGCCAAGTTATGTATAGCCTGGATCAGTCACAAAGTGTGGAAGTCATTGAATCCTTTGCCATTAACATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp GTGATTTCTGCATTTGCTTCAATATCCCGACTTGCTGCATACACTTaGAGAACTTCAGTTCCAACAAGAATGTCCTCAGACACGGTGGCA +
Preference number: 5 (lower is better)
Translates to: VISAFASISRLAAYT*RTSVPTRMSSDTVA
Trigger: TGCCACCGTGTCTGAGGACATTCTTGTTGGAACTGAAGTTCTTCAAGTGTATGCAGCAAGTCGGGATATTGAAGCAAATGCAGAAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp TACCATGACCACAGGTGTGTTGGGAGGAGCAAATTCACTTATTTCTaGTCTGTAAACATCCTTTTCAAACTTGACTGGCCCGGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: YHDHRCVGRSKFTYF*SVNILFKLDWPGFE
Trigger: TTCAAAGCCGGGCCAGTCAAGTTTGAAAAGGATGTTTACAGAGCAGAAATAAGTGAATTTGCTCCTCCCAACACACCTGTGGTCATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS GCA 90 bp ATCATTTTGGTCTTCTACAATGACCTTCACGACAACGTGGGCCACTaGAGAAGGCTTATGTTCCTCTGTCACTTCTACAACCACATCAAA +
Preference number: 5 (lower is better)
Translates to: IILVFYNDLHDNVGH*RRLMFLCHFYNHIK
Trigger: TTTGATGTGGTTGTAGAAGTGACAGAGGAACATAAGCCTTCTGCAGTGGCCCACGTTGTCGTGAAGGTCATTGTAGAAGACCAAAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGACAATACCCCCGAGTaGGGGTTTAAACTAAAGAAA +
Preference number: 5 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSDNTPE*GFKLKK
Trigger: TTTCTTTAGTTTAAACCCCAACTCGGGGGTATTGTC...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTTCTCTGCCAGCATTTaGGCAACACCAGTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADFSASI*ATPVSS
Trigger: TGAAGAGACTGGTGTTGCCAAAATGCTGGCAGAGAA...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTATATTCAGGGTGTATTaGTCTGTTGTTTCACGGTCA +
Preference number: 5 (lower is better)
Translates to: KSLEALLQRTARITHITSIFRVY*SVVSRS
Trigger: TGACCGTGAAACAACAGACAAATACACCCTGAATAT...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGCCGTCACGCTGTCAATaGAAAATGTGTCTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPPSRCQ*KMCLCL
Trigger: CAGACACAGACACATTTTCAATTGACAGCGTGACGG...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCCGACACCCTGATCGGTaGCAAAGACTGTTAGCCAAT +
Preference number: 5 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPRHPDR*QRLLAN
Trigger: ATTGGCTAACAGTCTTTGCAACCGATCAGGGTGTCG...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCGGCTTCATAAATCTGTaGTTCAAAGAGTGGTGGATT +
Preference number: 5 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGGFINL*FKEWWI
Trigger: AATCCACCACTCTTTGAACAACAGATTTATGAAGCC...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGATGGAATACTGCAACTaGTCTATGTCTGAACTGTCT +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLMEYCN*SMSELS
Trigger: AGACAGTTCAGACATAGACAAGTTGCAGTATTCCAT...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCGAACAACAGATTCTTTaGATGGAGACCCATTATCCA +
Preference number: 5 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLEQQIL*METHYP
Trigger: TGGATAATGGGTCTCCATCAAAAGAATCTGTTGTTC...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTACTTGCTGCATACACTaGAAGAACTTCAGTTCCAAC +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTTCCIH*KNFSSN
Trigger: GTTGGAACTGAAGTTCTTCAAGTGTATGCAGCAAGT...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTGTCGTGTAGGTGTCTaGGCTGAACACAGGGGTATT +
Preference number: 5 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPCRVGV*AEHRGI
Trigger: AATACCCCTGTGTTCAGCCAAGACACCTACACGACA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTGAATTTCGGTCCAGATaGTTTCTTGAGTCACTTGGA +
Preference number: 5 (lower is better)
Translates to: KEQRGLLTSPLGSLKSGTEFRSR*FLESLG
Trigger: TCCAAGTGACTCAAGAAACAATCTGGACCGAAATTC...AGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000512772.5
ENST00000614102.4
CDS GCA 90 bp GAATGCCTCATATGGACTAGATTCAAAGACCGGGCTGTTGTCATTTaGATCTTTCACTTGGATACTAACATCTACAGAAGCCACCATCTC +
Preference number: 5 (lower is better)
Translates to: ECLIWTRFKDRAVVI*IFHLDTNIYRSHHL
Trigger: GAGATGGTGGCTTCTGTAGATGTTAGTATCCAAGTGAAAGATGCAAATGACAACAGCCCGGTCTTTGAATCTAGTCCATATGAGGCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 90 bp TCTTTCTCCTTCCTCTTGATGGCAGATGATGTCAGGAGGACTCCTTaGGGGTTAACTTCAAAAGCCTTCTCATCATTTCCAGTTACAATA +
Preference number: 5 (lower is better)
Translates to: SFSFLLMADDVRRTP*GLTSKAFSSFPVTI
Trigger: TATTGTAACTGGAAATGATGAGAAGGCTTTTGAAGTTAACCCGCAAGGAGTCCTCCTGACATCATCTGCCATCAAGAGGAAGGAGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 90 bp AAAATGATTCTTCAAATGAAATGGGCTCCAGGGACGGTTTGGGCTTaGAGATCCATTCAATATGGAGTCTGGTGGTTGATGACTTTTGAG +
Preference number: 5 (lower is better)
Translates to: KMILQMKWAPGTVWA*RSIQYGVWWLMTFE
Trigger: CTCAAAAGTCATCAACCACCAGACTCCATATTGAATGGATCTCCAAGCCCAAACCGTCCCTGGAGCCCATTTCATTTGAAGAATCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTCTCCGGAAACAATTTaGTACCTTACTTCCCACGCT +
Preference number: 5 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADSPETI*YLTSHA
Trigger: AGCGTGGGAAGTAAGGTACAAAATTGTTTCCGGAGA...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATATGTGCACCGTTAGCTaGGCCATGCTGCTGATGCCA +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYMCTVS*AMLLMP
Trigger: TGGCATCAGCAGCATGGCCAAGCTAACGGTGCACAT...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTTGACTGGCCCGGCTTaGAACTGTGGAGAAGTCACG +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYLTGPA*NCGEVT
Trigger: CGTGACTTCTCCACAGTTCAAAGCCGGGCCAGTCAA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTGCACATGATTTAAATTaGCGATACTGTATGTCACGT +
Preference number: 5 (lower is better)
Translates to: KSLEALLQRTARITHITSAHDLN*RYCMSR
Trigger: ACGTGACATACAGTATCGCAAATTTAAATCATGTGC...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp GAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACTTTGCTAGATCTCTGGGAATaGTCCCTTCACAATTTATTT +
Preference number: 5 (lower is better)
Translates to: EQRGLLTSPLGSLKSGTLLDLWE*SLHNLF
Trigger: AAATAAATTGTGAAGGGACAATTCCCAGAGATCTAG...CAAAGTGCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTATTTTGTACATGAGCTaGTCATTAGAGCTCGAATCT +
Preference number: 5 (lower is better)
Translates to: KSLEALLQRTARITHITSILYMS*SLELES
Trigger: AGATTCGAGCTCTAATGACAAGCTCATGTACAAAAT...AGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTCTGCATCAAGAGGTTaGGCAACAATGATGGTTCCA +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPSASRG*ATMMVP
Trigger: TGGAACCATCATTGTTGCCAAACCTCTTGATGCAGA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCACTTCGATCTAATTCTTaGGCAGTTTTAATAGAGCCC +
Preference number: 5 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSLRSNS*AVLIEP
Trigger: GGGCTCTATTAAAACTGCCAAAGAATTAGATCGAAG...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAATGGAATACTGCAACTaGTCTATGTCTGAACTGTCT +
Preference number: 5 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSMEYCN*SMSELS
Trigger: AGACAGTTCAGACATAGACAAGTTGCAGTATTCCAT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGATTACGCCGGACAGTTaGTTAATTTCCAAATTCTCT +
Preference number: 5 (lower is better)
Translates to: LQRTARITHITSRFTKVRITPDS*LISKFS
Trigger: AGAGAATTTGGAAATTAACAAACTGTCCGGCGTAAT...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGAAGGACTCATCCCTATaGCTTTCTGGAGTATTCCCT +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPKDSSL*LSGVFP
Trigger: AGGGAATACTCCAGAAAGCAATAGGGATGAGTCCTT...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATTCAAAGACCGGGCTGTaGTCATTTGCATCTTTCACT +
Preference number: 5 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADSKTGL*SFASFT
Trigger: AGTGAAAGATGCAAATGACAACAGCCCGGTCTTTGA...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAAAAGCTTGGAAGCACTGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCACAGGGGTATTATCGTaGATATCTGTTACATTAACG +
Preference number: 5 (lower is better)
Translates to: KKLGSTAAKNSADYSHHLTGVLS*ISVTLT
Trigger: CGTTAATGTAACAGATATCAACGATAATACCCCTGT...GAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCAGTGCTTCCAAGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGCATCTCCTGTGTGACTaGTCTGATATGCACTGTGAT +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPHLLCD*SDMHCD
Trigger: ATCACAGTGCATATCAGACAAGTCACACAGGAGATG...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGCACGGAAGAGTTAATCTaGTGCAGAAGTTGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: CKEQRGLLTSPLGSLKSGTEELI*CRSCFV
Trigger: AACAAAACAACTTCTGCACAAGATTAACTCTTCCGT...GCCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGGGTCCAGATTGTTTCTaGAGTCACTTGGAATACTCG +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPGPDCF*SHLEYS
Trigger: CGAGTATTCCAAGTGACTCAAGAAACAATCTGGACC...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATACCAGTGCCTTTTGTTaGAGGTTCAGACATATCGAG +
Preference number: 5 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADTSAFC*RFRHIE
Trigger: CTCGATATGTCTGAACCTCAAACAAAAGGCACTGGT...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp CTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAGGACCTTTACAAGACCATaGCATCACAAATATACAGAC +
Preference number: 5 (lower is better)
Translates to: LQRTARITHITSRFTKVRTFTRP*HHKYTD
Trigger: GTCTGTATATTTGTGATGCAATGGTCTTGTAAAGGT...CCTGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp ATTTTGGCAACACCAGTCTCTTCACACTGCAAGTTTACCAGCTTGTaGCTGGCAGCCACTGTTATGTTGATATATAATGGTGTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: ILATPVSSHCKFTSL*LAATVMLIYNGVAK
Trigger: TTTTGCCACACCATTATATATCAACATAACAGTGGCTGCCAGTCACAAGCTGGTAAACTTGCAGTGTGAAGAGACTGGTGTTGCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp GCATCACCTGTATTTCCATCTTTTATTTCATACACCACTGATGATTaGCTATGGGCTGTAACCATCCCAACGAAACTCCCAATGCTGACA +
Preference number: 5 (lower is better)
Translates to: ASPVFPSFISYTTDD*LWAVTIPTKLPMLT
Trigger: TGTCAGCATTGGGAGTTTCGTTGGGATGGTTACAGCCCATAGTCAATCATCAGTGGTGTATGAAATAAAAGATGGAAATACAGGTGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGGTAAATTCAGGGGGATaGCTATTTGCACCTAAGACT +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPVNSGG*LFAPKT
Trigger: AGTCTTAGGTGCAAATAGCAATCCCCCTGAATTTAC...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGGACAATACCCCCGAGTaGGGGTTTAAACTAAAGAAA +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPDNTPE*GFKLKK
Trigger: TTTCTTTAGTTTAAACCCCAACTCGGGGGTATTGTC...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATAAGTTATTTCACTCATaGGTGGACTGCCCTTATCTG +
Preference number: 5 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADKLFHS*VDCPYL
Trigger: CAGATAAGGGCAGTCCACCAATGAGTGAAATAACTT...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTCCCATGTCATGCACTaGGACGGTAAAGTGAAAAAT +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPSHVMH*DGKVKN
Trigger: ATTTTTCACTTTACCGTCCAAGTGCATGACATGGGA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCATCGGTGGCTCTAACTaGAACAACAGACGTTCCAAT +
Preference number: 5 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPIGGSN*NNRRSN
Trigger: ATTGGAACGTCTGTTGTTCAAGTTAGAGCCACCGAT...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTGTGCAGAAGTTGTTTaGTTGAGATCTGAGCACTAC +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPCAEVV*LRSEHY
Trigger: GTAGTGCTCAGATCTCAACAAAACAACTTCTGCACA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATGACTTCTTCCATGCCTaGTTCCCTGCTGACGGATGT +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYDFFHA*FPADGC
Trigger: ACATCCGTCAGCAGGGAACAAGGCATGGAAGAAGTC...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGTGTGTCATGGTGGTTTaGGTTCTAAACAGGTATGCA +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPCVMVV*VLNRYA
Trigger: TGCATACCTGTTTAGAACCAAAACCACCATGACACA...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TGCTGCAAAGAACAGCGCGGATTACTCACATCACCTCTAGGTTCACTAAAGTCAACCTTTACAAGACCATaGCATCACAAATATACAGAC +
Preference number: 5 (lower is better)
Translates to: CCKEQRGLLTSPLGSLKSTFTRP*HHKYTD
Trigger: GTCTGTATATTTGTGATGCAATGGTCTTGTAAAGGT...TGACTTTAGTGAACCTAGAGGTGATGTGAGTAATCCGCGCTGTTCTTTGCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp AGGGTGTATACTGCCTGGAGTTCTCTGTCCAAAGGTTTTTCTAACTaGATAATTCCAGATAATTCGTTAATGGAGAACTGCCCATCAGCA +
Preference number: 5 (lower is better)
Translates to: RVYTAWSSLSKGFSN*IIPDNSLMENCPSA
Trigger: TGCTGATGGGCAGTTCTCCATTAACGAATTATCTGGAATTATTCAGTTAGAAAAACCTTTGGACAGAGAACTCCAGGCAGTATACACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp GTCACGGAAGAGTTAATCTTGTGCAGAAGTTGTTTTGTTGAGATCTaGGCACTACCTGGTTTCTCTACAAAAAGTAAGACGTCCAGATGT +
Preference number: 5 (lower is better)
Translates to: VTEELILCRSCFVEI*ALPGFSTKSKTSRC
Trigger: ACATCTGGACGTCTTACTTTTTGTAGAGAAACCAGGTAGTGCTCAGATCTCAACAAAACAACTTCTGCACAAGATTAACTCTTCCGTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTCATCAAAAGCAGCTTaGTACGCTGTCTGGGTAAAT +
Preference number: 5 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPSSKAA*YAVWVN
Trigger: ATTTACCCAGACAGCGTACAAAGCTGCTTTTGATGA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATCGACACCCTGATCGGTaGCAAAGACTGTTAGCCAAT +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYRHPDR*QRLLAN
Trigger: ATTGGCTAACAGTCTTTGCAACCGATCAGGGTGTCG...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTATGGAGTCTGGTGGTaGATGACTTTTGAGGGCGAC +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYYGVWW*MTFEGD
Trigger: GTCGCCCTCAAAAGTCATCAACCACCAGACTCCATA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCTCACAAACTGGACTGTaGTCATTTGCATCCAGAACT +
Preference number: 5 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPSQTGL*SFASRT
Trigger: AGTTCTGGATGCAAATGACAACAGTCCAGTTTGTGA...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp CAATTCTGTGGGAAAACGTCTATTTGCTTAATGAAAAGCCCAGCATaGCTGGCTCTCTGTTTGGAAAGAATAAATTTGACGACTGCATCA +
Preference number: 5 (lower is better)
Translates to: QFCGKTSICLMKSPA*LALCLERINLTTAS
Trigger: TGATGCAGTCGTCAAATTTATTCTTTCCAAACAGAGAGCCAGTCATGCTGGGCTTTTCATTAAGCAAATAGACGTTTTCCCACAGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503253.1
CDS TCA 90 bp ATGAGAGCTCTCATAATCCAGATTCTCAATGATAAATACGGCCCCTaGATAGAAATCAAAATTACTTCCAGCATTCTGCAATGCCACCAC +
Preference number: 5 (lower is better)
Translates to: MRALIIQILNDKYGP*IEIKITSSILQCHH
Trigger: GTGGTGGCATTGCAGAATGCTGGAAGTAATTTTGATTTCTATTCAGGGGCCGTATTTATCATTGAGAATCTGGATTATGAGAGCTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508035.1
CDS CCA 90 bp AAATTCACTTATTTCTGCTCTGTAAACATCCTTTTCAAACTTGACTaGCCCGGCTTTGAACTGTGGAGAAGTCACGTGAATGACTTTAAC +
Preference number: 5 (lower is better)
Translates to: KFTYFCSVNILFKLD*PGFELWRSHVNDFN
Trigger: GTTAAAGTCATTCACGTGACTTCTCCACAGTTCAAAGCCGGGCCAGTCAAGTTTGAAAAGGATGTTTACAGAGCAGAAATAAGTGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CCA 90 bp GGACTGCCCTTATCTGTAGCTTTTACCATTAAATCATACTCCGCTTaGTTACTTCGATCTAATTCTTTGGCAGTTTTAATAGAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: GLPLSVAFTIKSYSA*LLRSNSLAVLIEPK
Trigger: CTTGGGCTCTATTAAAACTGCCAAAGAATTAGATCGAAGTAACCAAGCGGAGTATGATTTAATGGTAAAAGCTACAGATAAGGGCAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp ATTTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGCTAGATCTCTGGGAATaGTCCCTTCACAATTTATTT +
Preference number: 5 (lower is better)
Translates to: ILTQTDVNPKRRWEMAQPLDLWE*SLHNLF
Trigger: AAATAAATTGTGAAGGGACAATTCCCAGAGATCTAG...CGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATGGGTGTATTTGTCTGTaGTTTCACGGTCAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYGCICL*FHGQEE
Trigger: CTCCTCTTGACCGTGAAACAACAGACAAATACACCC...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCGATCTAATTCTTaGGCAGTTTTAATAGAGCCC +
Preference number: 5 (lower is better)
Translates to: YKNCVMVVLVLNRYAEGPLRSNS*AVLIEP
Trigger: GGGCTCTATTAAAACTGCCAAAGAATTAGATCGAAG...GGGACCTTCTGCATACCTGTTTAGAACCAAAACCACCATGACACAGTTTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATAACTTCGGAGAGGCGTaGTCAGCAATTGTGACAAAG +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYNFGEA*SAIVTK
Trigger: CTTTGTCACAATTGCTGACAACGCCTCTCCGAAGTT...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp TTTAACACAGACAGATGTAAATCCCAAAAGACGTTGGGAAATGGCACAGCCGATGTGTCTGGATTTAGTTaGAATTTTTCTGCACCTGAA +
Preference number: 5 (lower is better)
Translates to: FNTDRCKSQKTLGNGTADVSGFS*NFSAPE
Trigger: TTCAGGTGCAGAAAAATTCAAACTAAATCCAGACAC...ATCGGCTGTGCCATTTCCCAACGTCTTTTGGGATTTACATCTGTCTGTGTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTATAGAGAGAGCCGGTaGCAGGATCAAGACGAAATT +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYYRESR*QDQDEI
Trigger: AATTTCGTCTTGATCCTGCAACCGGCTCTCTCTATA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATCTTCAACTATCGCTTTaGATGAGAAGGTGCCATCAG +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYLQLSL*MRRCHQ
Trigger: CTGATGGCACCTTCTCATCAAAAGCGATAGTTGAAG...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp ATACAGCATGTCCTTACGCCAGTATCTATGACAATTCCAAATGGCTaGGAAATGTATGTACCACAAATAAAATGGAATATGGAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: IQHVLTPVSMTIPNG*EMYVPQIKWNMEVE
Trigger: CTCCACTTCCATATTCCATTTTATTTGTGGTACATACATTTCTCAGCCATTTGGAATTGTCATAGATACTGGCGTAAGGACATGCTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS CCA 90 bp AGCCATACAGCATGTCCTTACGCCAGTATCTATGACAATTCCAAATaGCTGAGAAATGTATGTACCACAAATAAAATGGAATATGGAAGT +
Preference number: 5 (lower is better)
Translates to: SHTACPYASIYDNSK*LRNVCTTNKMEYGS
Trigger: ACTTCCATATTCCATTTTATTTGTGGTACATACATTTCTCAGCCATTTGGAATTGTCATAGATACTGGCGTAAGGACATGCTGTATGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTCTTTCACATTAATTTaGACAGAGGTAAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYSFTLI*TEVRPA
Trigger: TGCCGGCCTTACCTCTGTCAAAATTAATGTGAAAGA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATAAGGTTCTGAAAATTTaGGAAGCTGCATTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYKVLKI*EAAFPV
Trigger: CACCGGAAATGCAGCTTCCAAAATTTTCAGAACCTT...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATCTTCAATATCCCGACTaGCTGCATACACTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYLQYPD*LHTLEE
Trigger: TTCTTCAAGTGTATGCAGCAAGTCGGGATATTGAAG...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATTCTCACCAGTGCCTTTaGTTTGAGGTTCAGACATAT +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYSHQCL*FEVQTY
Trigger: ATATGTCTGAACCTCAAACAAAAGGCACTGGTGAGA...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp TTCTGTTTCTGGCGCTGTATCTTCAGGAATAACAACTTCATACTTTaGTGTAGAAAACTGAGGACGATGGTCATTTGTGTCTATTACTTT +
Preference number: 5 (lower is better)
Translates to: FCFWRCIFRNNNFIL*CRKLRTMVICVYYF
Trigger: AAAGTAATAGACACAAATGACCATCGTCCTCAGTTTTCTACATCAAAGTATGAAGTTGTTATTCCTGAAGATACAGCGCCAGAAACAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp TTTAGAATCTATGCTGAATTTCCCATGTTCATTTCCACTTATTATTaGGTAGGTGATTTCTGCATTTGCTTCAATATCCCGACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: FRIYAEFPMFISTYY*VGDFCICFNIPTCC
Trigger: GCAGCAAGTCGGGATATTGAAGCAAATGCAGAAATCACCTACTCAATAATAAGTGGAAATGAACATGGGAAATTCAGCATAGATTCTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATATGTACTCTTCAGCTTaGAACAGGTTTTCACTGTCT +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYMYSSA*NRFSLS
Trigger: AGACAGTGAAAACCTGTTCAAAGCTGAAGAGTACAT...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 90 bp CTAGAATCAATAGCAAAATATGTGTGTACAGATGGTTCAACAATGTaGTATACAAGCAAAGCATTTGAGTCTTTATCAGCATCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LESIAKYVCTDGSTM*YTSKAFESLSASAA
Trigger: AGCAGCTGATGCTGATAAAGACTCAAATGCTTTGCTTGTATATCACATTGTTGAACCATCTGTACACACATATTTTGCTATTGATTCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATATACAAGCAAAGCATTaGAGTCTTTATCAGCATCAG +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYIQAKH*SLYQHQ
Trigger: CTGATGCTGATAAAGACTCAAATGCTTTGCTTGTAT...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS-3UTR CAA 90 bp AAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATATTACGCCGGACAGTTaGTTAATTTCCAAATTCTCT +
Preference number: 5 (lower is better)
Translates to: KQVCRRSPLHFPIMKNVYITPDS*LISKFS
Trigger: AGAGAATTTGGAAATTAACAAACTGTCCGGCGTAAT...ATAAACATTTTTCATTATTGGAAAGTGTAACGGGGACCTTCTGCATACCTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp TTTGTCAGGACGTGCCCAGGCAGCCAGCCGCCGAGTTaGGGAGTTGCGGCCGCCGGCTGCGGCGACTCGCTG +
Preference number: 6 (lower is better)
Translates to: FVRTCPGSQPPS*GVAAAGCGDSL
Trigger: CAGCGAGTCGCCGCAGCCGGCGGCCGCAACTCCTCAACTCGGCGGCTGGCTGCCTGGGCACGTCCTGACAAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509647.1
CDS CCA 72 bp TCGCAAAGTTGGCCCGAAGTGGCGACGGCGCTCTCGTaGAGCTCACCCGCCGTCTCAGCGCGCCCCCGAGCA +
Preference number: 6 (lower is better)
Translates to: SQSWPEVATALS*SSPAVSARPRA
Trigger: TGCTCGGGGGCGCGCTGAGACGGCGGGTGAGCTCCACGAGAGCGCCGTCGCCACTTCGGGCCAACTTTGCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp GTTTGTCAGGACGTGCCCAGGCAGCCAGCCGCCGAGTaGAGGAGTTGCGGCCGCCGGCTGCGGCGACTCGCT +
Preference number: 6 (lower is better)
Translates to: VCQDVPRQPAAE*RSCGRRLRRLA
Trigger: AGCGAGTCGCCGCAGCCGGCGGCCGCAACTCCTCAACTCGGCGGCTGGCTGCCTGGGCACGTCCTGACAAAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509647.1
CDS CAA 90 bp AGCAGCCAAGTTTGTCAGGACGTGCCCAGGCAGCCAGCCGCCGAGTaGAGGAGTTGCGGCCGCCGGCTGCGGCGACTCGCTGCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: SSQVCQDVPRQPAAE*RSCGRRLRRLAASF
Trigger: GAAAGAGGCAGCGAGTCGCCGCAGCCGGCGGCCGCAACTCCTCAACTCGGCGGCTGGCTGCCTGGGCACGTCCTGACAAACTTGGCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509647.1
CDS CAA 90 bp AAGAGAGTGCGCGGGGCCGGAACGAGGGCCCGGGAGCAGCCAAGTTaGTCAGGACGTGCCCAGGCAGCCAGCCGCCGAGTTGAGGAGTTG +
Preference number: 6 (lower is better)
Translates to: KRVRGAGTRAREQPS*SGRAQAASRRVEEL
Trigger: CAACTCCTCAACTCGGCGGCTGGCTGCCTGGGCACGTCCTGACAAACTTGGCTGCTCCCGGGCCCTCGTTCCGGCCCCGCGCACTCTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509647.1
CDS CCA 72 bp CGTCAGAGCAGGAGGCGGTGGAGGCGTACACAGACATaGGCATGCTCTCGACAGCGGGCGCCTCGAAGTGTC +
Preference number: 6 (lower is better)
Translates to: RQSRRRWRRTQT*ACSRQRAPRSV
Trigger: GACACTTCGAGGCGCCCGCTGTCGAGAGCATGCCCATGTCTGTGTACGCCTCCACCGCCTCCTGCTCTGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS GCA 72 bp GGGAGGCAGGTTTGGCGCCACGCTGCAGACCGCCACTaGTTTTCGGTGCCCGTGCACAGACTCGGGGTTAAA +
Preference number: 6 (lower is better)
Translates to: GRQVWRHAADRH*FSVPVHRLGVK
Trigger: TTTAACCCCGAGTCTGTGCACGGGCACCGAAAAGCAGTGGCGGTCTGCAGCGTGGCGCCAAACCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS GCA 72 bp GGCAAACTTAAGCACCAAACGCAGGCGAAAAGAGAGTaGGCGGGGCCGGAACGAGGGCCCGGGAGCAGCCAA +
Preference number: 6 (lower is better)
Translates to: GKLKHQTQAKRE*AGPERGPGSSQ
Trigger: TTGGCTGCTCCCGGGCCCTCGTTCCGGCCCCGCGCACTCTCTTTTCGCCTGCGTTTGGTGCTTAAGTTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509647.1
CDS CCA 72 bp TGCTTAACTGTCGGGAATCGCAAAGTTGGCCCGAAGTaGCGACGGCGCTCTCGTGGAGCTCACCCGCCGTCT +
Preference number: 6 (lower is better)
Translates to: CLTVGNRKVGPK*RRRSRGAHPPS
Trigger: AGACGGCGGGTGAGCTCCACGAGAGCGCCGTCGCCACTTCGGGCCAACTTTGCGATTCCCGACAGTTAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp CCTCCAGCAGGTGACGGATTGCAAACGCCTCCATTCTaGCAAGGGTTGCTGGCGCAGTCTTCCGTGGCCGTC +
Preference number: 6 (lower is better)
Translates to: PPAGDGLQTPPF*QGLLAQSSVAV
Trigger: GACGGCCACGGAAGACTGCGCCAGCAACCCTTGCCAGAATGGAGGCGTTTGCAATCCGTCACCTGCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp GGGCATGCTCTCGACAGCGGGCGCCTCGAAGTGTCTTaGATACCCTGGCGGGTAAGGGGCATGGGGTTCTCT +
Preference number: 6 (lower is better)
Translates to: GHALDSGRLEVS*IPWRVRGMGFS
Trigger: AGAGAACCCCATGCCCCTTACCCGCCAGGGTATCAAAGACACTTCGAGGCGCCCGCTGTCGAGAGCATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS GCA 72 bp GTGACGGATTGCAAACGCCTCCATTCTGGCAAGGGTTaGTGGCGCAGTCTTCCGTGGCCGTCAGGAAGCAGC +
Preference number: 6 (lower is better)
Translates to: VTDCKRLHSGKG*WRSLPWPSGSS
Trigger: GCTGCTTCCTGACGGCCACGGAAGACTGCGCCAGCAACCCTTGCCAGAATGGAGGCGTTTGCAATCCGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp CCTCGCAGTGACGTCCCCTGTACTCGTGGCTGCAGTTaGAGTGATAGGAGCCGTGCGTGTTCTCACAGAGGG +
Preference number: 6 (lower is better)
Translates to: PRSDVPCTRGCS*SDRSRACSHRG
Trigger: CCCTCTGTGAGAACACGCACGGCTCCTATCACTGCAACTGCAGCCACGAGTACAGGGGACGTCACTGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000507105.1
ENST00000614102.4
CDS GCA 72 bp AGCAGGAGGCGGTGGAGGCGTACACAGACATGGGCATaGTCTCGACAGCGGGCGCCTCGAAGTGTCTTTGAT +
Preference number: 6 (lower is better)
Translates to: SRRRWRRTQTWA*SRQRAPRSVFD
Trigger: ATCAAAGACACTTCGAGGCGCCCGCTGTCGAGAGCATGCCCATGTCTGTGTACGCCTCCACCGCCTCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS CCA 72 bp ACGGATTGCAAACGCCTCCATTCTGGCAAGGGTTGCTaGCGCAGTCTTCCGTGGCCGTCAGGAAGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: TDCKRLHSGKGC*RSLPWPSGSSL
Trigger: CAGGCTGCTTCCTGACGGCCACGGAAGACTGCGCCAGCAACCCTTGCCAGAATGGAGGCGTTTGCAATCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp AGTGGCCGTCGTCCCCGCTCTCATAGTCACTCATCATaGCCTCGGACTCCACTTCGCAGCAGGCTGACACGT +
Preference number: 6 (lower is better)
Translates to: SGRRPRSHSHSS*PRTPLRSRLTR
Trigger: ACGTGTCAGCCTGCTGCGAAGTGGAGTCCGAGGTCATGATGAGTGACTATGAGAGCGGGGACGACGGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS GCA 72 bp CAGCATCCTCGCAGTGACGTCCCCTGTACTCGTGGCTaGAGTTGCAGTGATAGGAGCCGTGCGTGTTCTCAC +
Preference number: 6 (lower is better)
Translates to: QHPRSDVPCTRG*SCSDRSRACSH
Trigger: GTGAGAACACGCACGGCTCCTATCACTGCAACTGCAGCCACGAGTACAGGGGACGTCACTGCGAGGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000507105.1
ENST00000614102.4
CDS CCA 72 bp CACCTTCCCTCTTTGCAGAGACACACCGCTGCCCTGTaGTGGCGGGGAGTCACAAAACTCAGTCTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: HLPSLQRHTAAL*WRGVTKLSLAV
Trigger: CACAGCCAGACTGAGTTTTGTGACTCCCCGCCACCACAGGGCAGCGGTGTGTCTCTGCAAAGAGGGAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp CCAACCCAATGTTCCACGGCGTGGACACATACTGGTTaGGCGCAGCATCCTCGCAGTGACGTCCCCTGTACT +
Preference number: 6 (lower is better)
Translates to: PTQCSTAWTHTG*AQHPRSDVPCT
Trigger: AGTACAGGGGACGTCACTGCGAGGATGCTGCGCCCAACCAGTATGTGTCCACGCCGTGGAACATTGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000614102.4
CDS CAA 90 bp CACAGACATGGGCATGCTCTCGACAGCGGGCGCCTCGAAGTGTCTTaGATACCCTGGCGGGTAAGGGGCATGGGGTTCTCTACAAGTACT +
Preference number: 6 (lower is better)
Translates to: HRHGHALDSGRLEVS*IPWRVRGMGFSTST
Trigger: AGTACTTGTAGAGAACCCCATGCCCCTTACCCGCCAGGGTATCAAAGACACTTCGAGGCGCCCGCTGTCGAGAGCATGCCCATGTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS GCA 72 bp TCTCTGGCTTGGTCCCTGGCCTCAATCTTTAAGGAGTaGTCATGCTGCAGCTCTCGATCCAGAGGGCGTGCG +
Preference number: 6 (lower is better)
Translates to: SLAWSLASIFKE*SCCSSRSRGRA
Trigger: CGCACGCCCTCTGGATCGAGAGCTGCAGCATGAGCACTCCTTAAAGATTGAGGCCAGGGACCAAGCCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp CAGCATGAGCGCCCGTCAAGGAGTCAGTTGCGCGTATaGTCAGCTTATATGCCGGGTGGGCCTCAAAGTCCA +
Preference number: 6 (lower is better)
Translates to: QHERPSRSQLRV*SAYMPGGPQSP
Trigger: TGGACTTTGAGGCCCACCCGGCATATAAGCTGAGCATACGCGCAACTGACTCCTTGACGGGCGCTCATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp TCGGATCCCTCAGGGCACGGATCATCTTCACAGCCATaGTGGACAGGTGGGCACCTTCCCTCTTTGCAGAGA +
Preference number: 6 (lower is better)
Translates to: SDPSGHGSSSQP*WTGGHLPSLQR
Trigger: TCTCTGCAAAGAGGGAAGGTGCCCACCTGTCCACCATGGCTGTGAAGATGATCCGTGCCCTGAGGGATCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp CTCGACAGCGGGCGCCTCGAAGTGTCTTTGATACCCTaGCGGGTAAGGGGCATGGGGTTCTCTACAAGTACT +
Preference number: 6 (lower is better)
Translates to: LDSGRLEVSLIP*RVRGMGFSTST
Trigger: AGTACTTGTAGAGAACCCCATGCCCCTTACCCGCCAGGGTATCAAAGACACTTCGAGGCGCCCGCTGTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS TCA 72 bp GACTTCGACTTCCCGGCGGTACGGCAAGCCCCAGTCTaGTGCACGAATCCTCAGAGTATAAACCCGAGGCAT +
Preference number: 6 (lower is better)
Translates to: DFDFPAVRQAPV*CTNPQSINPRH
Trigger: ATGCCTCGGGTTTATACTCTGAGGATTCGTGCATCAGACTGGGGCTTGCCGTACCGCCGGGAAGTCGAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp CATCAAACGCCTCCTGCTGCTCACGATCGAAGGGCGTaGCAGTGGTTGACAGAACTCCTGAAGTGCGGCTTA +
Preference number: 6 (lower is better)
Translates to: HQTPPAAHDRRA*QWLTELLKCGL
Trigger: TAAGCCGCACTTCAGGAGTTCTGTCAACCACTGGCACGCCCTTCGATCGTGAGCAGCAGGAGGCGTTTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp CACATCACTGCTCAGCGTGGGCATACCACCATCAACTaGCCTCACAAAAATCGTGTGCTGCCGGGACTGCTC +
Preference number: 6 (lower is better)
Translates to: HITAQRGHTTIN*PHKNRVLPGLL
Trigger: GAGCAGTCCCGGCAGCACACGATTTTTGTGAGGGCAGTTGATGGTGGTATGCCCACGCTGAGCAGTGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp TTCCAATTCCTTCCGCCAACCCAATGTTCCACGGCGTaGACACATACTGGTTGGGCGCAGCATCCTCGCAGT +
Preference number: 6 (lower is better)
Translates to: FQFLPPTQCSTA*THTGWAQHPRS
Trigger: ACTGCGAGGATGCTGCGCCCAACCAGTATGTGTCCACGCCGTGGAACATTGGGTTGGCGGAAGGAATTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000614102.4
CDS TCA 72 bp TCAGCAGCGTTCCCGGCTCTGTGTTTTCAAACACGGTaGTGGCATAAGGATCGGCAGAGAATTCGGGGGCGT +
Preference number: 6 (lower is better)
Translates to: SAAFPALCFQTR*WHKDRQRIRGR
Trigger: ACGCCCCCGAATTCTCTGCCGATCCTTATGCCATCACCGTGTTTGAAAACACAGAGCCGGGAACGCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp TCACTTCCAGGGCCACTGCGTGCCACTGCCCATCATTaGCCTGAATGCTCTGAACAGAGACAATTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: SLPGPLRATAHH*PECSEQRQFQG
Trigger: GCCCTGGAATTGTCTCTGTTCAGAGCATTCAGGTCAATGATGGGCAGTGGCACGCAGTGGCCCTGGAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp GCTTGGTCCCTGGCCTCAATCTTTAAGGAGTGCTCATaGTGCAGCTCTCGATCCAGAGGGCGTGCGATGTTA +
Preference number: 6 (lower is better)
Translates to: AWSLASIFKECS*CSSRSRGRAML
Trigger: TAACATCGCACGCCCTCTGGATCGAGAGCTGCAGCATGAGCACTCCTTAAAGATTGAGGCCAGGGACCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp TCCTCTGTCACTTCTACAACCACATCAAACGCCTCCTaGTGCTCACGATCGAAGGGCGTGCCAGTGGTTGAC +
Preference number: 6 (lower is better)
Translates to: SSVTSTTTSNAS*CSRSKGVPVVD
Trigger: GTCAACCACTGGCACGCCCTTCGATCGTGAGCAGCAGGAGGCGTTTGATGTGGTTGTAGAAGTGACAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp CGTCAAGGAGTCAGTTGCGCGTATGCTCAGCTTATATaGCGGGTGGGCCTCAAAGTCCAGAGGAGCTATGAC +
Preference number: 6 (lower is better)
Translates to: RQGVSCAYAQLI*RVGLKVQRSYD
Trigger: GTCATAGCTCCTCTGGACTTTGAGGCCCACCCGGCATATAAGCTGAGCATACGCGCAACTGACTCCTTGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp AAATACTTCAGCATGAGCGCCCGTCAAGGAGTCAGTTaGGCGTATGCTCAGCTTATATGCCGGGTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: KYFSMSARQGVS*AYAQLICRVGL
Trigger: GAGGCCCACCCGGCATATAAGCTGAGCATACGCGCAACTGACTCCTTGACGGGCGCTCATGCTGAAGTATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp ACTGGCAAACAAAGCCTCCGTTGTCGACAACACACGTaGCCCCATAGAGGCATGGCTTGGAGGAACACGGAT +
Preference number: 6 (lower is better)
Translates to: TGKQSLRCRQHT*PHRGMAWRNTD
Trigger: ATCCGTGTTCCTCCAAGCCATGCCTCTATGGGGGCACGTGTGTTGTCGACAACGGAGGCTTTGTTTGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000507662.1
ENST00000512347.1
ENST00000614102.4
CDS CAA 72 bp CAAATACTTCAGCATGAGCGCCCGTCAAGGAGTCAGTaGCGCGTATGCTCAGCTTATATGCCGGGTGGGCCT +
Preference number: 6 (lower is better)
Translates to: QILQHERPSRSQ*RVCSAYMPGGP
Trigger: AGGCCCACCCGGCATATAAGCTGAGCATACGCGCAACTGACTCCTTGACGGGCGCTCATGCTGAAGTATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 90 bp GGCAAAGCGGATCGCGATGGTGTGGTTCAACATCTCCTGTGTGACTaGTCTGATATGCACTGTGATGTCGGCCACCGTCGTGAACTTCCC +
Preference number: 6 (lower is better)
Translates to: GKADRDGVVQHLLCD*SDMHCDVGHRRELP
Trigger: GGGAAGTTCACGACGGTGGCCGACATCACAGTGCATATCAGACAAGTCACACAGGAGATGTTGAACCACACCATCGCGATCCGCTTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp AGTTGCGCCAGTAGTCACCAACGAATTCTTCCGGAGTaGGGTTGGCAAAGCGGATCGCGATGGTGTGGTTCA +
Preference number: 6 (lower is better)
Translates to: SCASSHQRILPE*GWQSGSRWCGS
Trigger: TGAACCACACCATCGCGATCCGCTTTGCCAACCTCACTCCGGAAGAATTCGTTGGTGACTACTGGCGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp TGCCCCCATAGAGGCATGGCTTGGAGGAACACGGATTaGCGCTTATCTCACAGTGGGTCCCTATGTACAAGG +
Preference number: 6 (lower is better)
Translates to: CPHRGMAWRNTD*RLSHSGSLCTR
Trigger: CCTTGTACATAGGGACCCACTGTGAGATAAGCGTCAATCCGTGTTCCTCCAAGCCATGCCTCTATGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000507662.1
ENST00000512347.1
ENST00000614102.4
CDS GCA 72 bp GTTATCACCGGAGCACATTCATTGGCCTGTTCGATGTaGACCGTTAGCTTGGCCATGCTGCTGATGCCACTG +
Preference number: 6 (lower is better)
Translates to: VITGAHSLACSM*TVSLAMLLMPL
Trigger: CAGTGGCATCAGCAGCATGGCCAAGCTAACGGTGCACATCGAACAGGCCAATGAATGTGCTCCGGTGATAAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS GCA 72 bp TGGTCCCTGGCCTCAATCTTTAAGGAGTGCTCATGCTaGAGCTCTCGATCCAGAGGGCGTGCGATGTTAACA +
Preference number: 6 (lower is better)
Translates to: WSLASIFKECSC*SSRSRGRAMLT
Trigger: TGTTAACATCGCACGCCCTCTGGATCGAGAGCTGCAGCATGAGCACTCCTTAAAGATTGAGGCCAGGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp TCTGTCACTTCTACAACCACATCAAACGCCTCCTGCTaGTCACGATCGAAGGGCGTGCCAGTGGTTGACAGA +
Preference number: 6 (lower is better)
Translates to: SVTSTTTSNASC*SRSKGVPVVDR
Trigger: TCTGTCAACCACTGGCACGCCCTTCGATCGTGAGCAGCAGGAGGCGTTTGATGTGGTTGTAGAAGTGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp ATCTTCCGATTTAATCCTGCGTCGGCATCTGTGGCCTaGACTCTTGTCAGCAGCGTTCCCGGCTCTGTGTTT +
Preference number: 6 (lower is better)
Translates to: IFRFNPASASVA*TLVSSVPGSVF
Trigger: AAACACAGAGCCGGGAACGCTGCTGACAAGAGTGCAGGCCACAGATGCCGACGCAGGATTAAATCGGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp TGCATTTGCAGTAATAACCTCCAGCAGGTGACGGATTaGAAACGCCTCCATTCTGGCAAGGGTTGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: CICSNNLQQVTD*KRLHSGKGCWR
Trigger: GCGCCAGCAACCCTTGCCAGAATGGAGGCGTTTGCAATCCGTCACCTGCTGGAGGTTATTACTGCAAATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp TGGAGAACAGCTGAGGCTCTTCTCTGGCTTGGTCCCTaGCCTCAATCTTTAAGGAGTGCTCATGCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: WRTAEALLWLGP*PQSLRSAHAAA
Trigger: AGCTGCAGCATGAGCACTCCTTAAAGATTGAGGCCAGGGACCAAGCCAGAGAAGAGCCTCAGCTGTTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp TCCGTTGTCGACAACACACGTGCCCCCATAGAGGCATaGCTTGGAGGAACACGGATTGACGCTTATCTCACA +
Preference number: 6 (lower is better)
Translates to: SVVDNTRAPIEA*LGGTRIDAYLT
Trigger: TGTGAGATAAGCGTCAATCCGTGTTCCTCCAAGCCATGCCTCTATGGGGGCACGTGTGTTGTCGACAACGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000507662.1
ENST00000512347.1
ENST00000614102.4
CDS GCA 72 bp TCCTGCACGGTGACGTTGTACTCGAGGTGTGTAAACTaGAGAGGAGTCTGTTCAAGTCGTTGGCTGCCATCA +
Preference number: 6 (lower is better)
Translates to: SCTVTLYSRCVN*RGVCSSRWLPS
Trigger: TGATGGCAGCCAACGACTTGAACAGACTCCTCTGCAGTTTACACACCTCGAGTACAACGTCACCGTGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS GCA 72 bp ACCCATCTTGACAGGATGCCCCACATAAGTCTTAGCTaGAGAGTTCTCCTGCACGGTGACGTTGTACTCGAG +
Preference number: 6 (lower is better)
Translates to: THLDRMPHISLS*RVLLHGDVVLE
Trigger: CTCGAGTACAACGTCACCGTGCAGGAGAACTCTGCAGCTAAGACTTATGTGGGGCATCCTGTCAAGATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS GCA 72 bp CCATCGGCATCATCGGCCATAACCGTGATGACAGACTaGTCAAGAACGGCATCTTCACTGATGACTGTCGTG +
Preference number: 6 (lower is better)
Translates to: PSASSAITVMTD*SRTASSLMTVV
Trigger: CACGACAGTCATCAGTGAAGATGCCGTTCTTGAGCAGTCTGTCATCACGGTTATGGCCGATGATGCCGATGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000508035.1
ENST00000614102.4
CDS GCA 72 bp TATCCAGGTTCAGGGTTTTCAGAGTCCCTGGGGCTGTaGCCGATGCAGTATGAACTTGGTCTAGAACCAAGC +
Preference number: 6 (lower is better)
Translates to: YPGSGFSESLGL*PMQYELGLEPS
Trigger: GCTTGGTTCTAGACCAAGTTCATACTGCATCGGGCACAGCCCCAGGGACTCTGAAAACCCTGAACCTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp TCACAACGACAGTGGAGAACAGCTGAGGCTCTTCTCTaGCTTGGTCCCTGGCCTCAATCTTTAAGGAGTGCT +
Preference number: 6 (lower is better)
Translates to: SQRQWRTAEALL*LGPWPQSLRSA
Trigger: AGCACTCCTTAAAGATTGAGGCCAGGGACCAAGCCAGAGAAGAGCCTCAGCTGTTCTCCACTGTCGTTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp ATAAAATCTTCCGATTTAATCCTGCGTCGGCATCTGTaGCCTGCACTCTTGTCAGCAGCGTTCCCGGCTCTG +
Preference number: 6 (lower is better)
Translates to: IKSSDLILRRHL*PALLSAAFPAL
Trigger: CAGAGCCGGGAACGCTGCTGACAAGAGTGCAGGCCACAGATGCCGACGCAGGATTAAATCGGAAGATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp TGGCAACGTCGCTCAGTGAAGGCGTGCCTCCATCAGTaGCCTCTACTGTTAGGTAATACTCATGAGAGCTCT +
Preference number: 6 (lower is better)
Translates to: WQRRSVKACLHQ*PLLLGNTHESS
Trigger: AGAGCTCTCATGAGTATTACCTAACAGTAGAGGCCACTGATGGAGGCACGCCTTCACTGAGCGACGTTGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000508035.1
ENST00000614102.4
CDS CCA 72 bp CACATCGATGTTCACGGTCGTCGTGTTGACTCTGGGTaGACTGCCATTATCAGAAGCTTGAACCGTGAGCGT +
Preference number: 6 (lower is better)
Translates to: HIDVHGRRVDSG*TAIIRSLNRER
Trigger: ACGCTCACGGTTCAAGCTTCTGATAATGGCAGTCCACCCAGAGTCAACACGACGACCGTGAACATCGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp TCCGGAGTGAGGTTGGCAAAGCGGATCGCGATGGTGTaGTTCAACATCTCCTGTGTGACTTGTCTGATATGC +
Preference number: 6 (lower is better)
Translates to: SGVRLAKRIAMV*FNISCVTCLIC
Trigger: GCATATCAGACAAGTCACACAGGAGATGTTGAACCACACCATCGCGATCCGCTTTGCCAACCTCACTCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp TGCACTTCAGACAGGCTTTCCCGGGCACTGTATGGCTaGGAAGGCTTTTCCTCTAGAGGCTTCTTGGAAAGA +
Preference number: 6 (lower is better)
Translates to: CTSDRLSRALYG*EGFSSRGFLER
Trigger: TCTTTCCAAGAAGCCTCTAGAGGAAAAGCCTTCCCAGCCATACAGTGCCCGGGAAAGCCTGTCTGAAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000507105.1
ENST00000512772.5
ENST00000614102.4
CDS CAA 72 bp GTGAACCACGGGGCGTGGTCATTCGTGTCGCTGACATaGACCACAATCCTTGCAAAGTTGCGTTTTACAGGC +
Preference number: 6 (lower is better)
Translates to: VNHGAWSFVSLT*TTILAKLRFTG
Trigger: GCCTGTAAAACGCAACTTTGCAAGGATTGTGGTCAATGTCAGCGACACGAATGACCACGCCCCGTGGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp GATTTAATCCTGCGTCGGCATCTGTGGCCTGCACTCTaGTCAGCAGCGTTCCCGGCTCTGTGTTTTCAAACA +
Preference number: 6 (lower is better)
Translates to: DLILRRHLWPAL*SAAFPALCFQT
Trigger: TGTTTGAAAACACAGAGCCGGGAACGCTGCTGACAAGAGTGCAGGCCACAGATGCCGACGCAGGATTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp GATCGCGATGGTGTGGTTCAACATCTCCTGTGTGACTaGTCTGATATGCACTGTGATGTCGGCCACCGTCGT +
Preference number: 6 (lower is better)
Translates to: DRDGVVQHLLCD*SDMHCDVGHRR
Trigger: ACGACGGTGGCCGACATCACAGTGCATATCAGACAAGTCACACAGGAGATGTTGAACCACACCATCGCGATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 90 bp TCGCGGTGTAGATATGTGTTAAGAGCCGGGTTTGAAGTACCAACTTaGCCTCCCCGGGATCTTCAGCATGTCCCTAACCAGAGTGCCAAC +
Preference number: 6 (lower is better)
Translates to: SRCRYVLRAGFEVPT*PPRDLQHVPNQSAN
Trigger: GTTGGCACTCTGGTTAGGGACATGCTGAAGATCCCGGGGAGGCAAAGTTGGTACTTCAAACCCGGCTCTTAACACATATCTACACCGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509647.1
CDS CAA 90 bp TCTGATGGTGACAATGTCACTGCTGTTATCACCGGAGCACATTCATaGGCCTGTTCGATGTGCACCGTTAGCTTGGCCATGCTGCTGATG +
Preference number: 6 (lower is better)
Translates to: SDGDNVTAVITGAHS*ACSMCTVSLAMLLM
Trigger: CATCAGCAGCATGGCCAAGCTAACGGTGCACATCGAACAGGCCAATGAATGTGCTCCGGTGATAACAGCAGTGACATTGTCACCATCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS TCA 72 bp TCTAGTGATACTTTCACAACGACAGTGGAGAACAGCTaGGGCTCTTCTCTGGCTTGGTCCCTGGCCTCAATC +
Preference number: 6 (lower is better)
Translates to: SSDTFTTTVENS*GSSLAWSLASI
Trigger: GATTGAGGCCAGGGACCAAGCCAGAGAAGAGCCTCAGCTGTTCTCCACTGTCGTTGTGAAAGTATCACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp GGCGTCCTCATCATGAGCCGACACCGTCATTACCAATaGACCAACAGGTGCATCTTCTTTCACTGTCCCCTT +
Preference number: 6 (lower is better)
Translates to: GVLIMSRHRHYQ*TNRCIFFHCPL
Trigger: AAGGGGACAGTGAAAGAAGATGCACCTGTTGGTTCATTGGTAATGACGGTGTCGGCTCATGATGAGGACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp TATCGGATCTCCCCATCTCTTCTGGCGTCCTCATCATaGGCCGACACCGTCATTACCAATGAACCAACAGGT +
Preference number: 6 (lower is better)
Translates to: YRISPSLLASSS*ADTVITNEPTG
Trigger: ACCTGTTGGTTCATTGGTAATGACGGTGTCGGCTCATGATGAGGACGCCAGAAGAGATGGGGAGATCCGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp ACTGTAAAATGGCTTCAGGGCGTGCCGGTGCAGGTTTaGGAGGGTGATAATCCCTGTTGCACTGTCAATGAC +
Preference number: 6 (lower is better)
Translates to: TVKWLQGVPVQV*EGDNPCCTVND
Trigger: GTCATTGACAGTGCAACAGGGATTATCACCCTCTCAAACCTGCACCGGCACGCCCTGAAGCCATTTTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp CGATATCACTCTGACACCTGCCAAGGAAGTCAGGAATaGGGAGAGACCTCTGTAGCATACGCCAGCGTATGT +
Preference number: 6 (lower is better)
Translates to: RYHSDTCQGSQE*GETSVAYASVC
Trigger: ACATACGCTGGCGTATGCTACAGAGGTCTCTCCTCATTCCTGACTTCCTTGGCAGGTGTCAGAGTGATATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500085.2
ENST00000507662.1
CDS GCA 72 bp CACAGGGCTGTGCACCTGGATGCTCTCTGCAATCTCTaGACTGTAGAAAGGTTTTTCAAACACAGGCATGGC +
Preference number: 6 (lower is better)
Translates to: HRAVHLDALCNL*TVERFFKHRHG
Trigger: GCCATGCCTGTGTTTGAAAAACCTTTCTACAGTGCAGAGATTGCAGAGAGCATCCAGGTGCACAGCCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp ATAGAGCGGCTCCCGTCTGGCATTTCTTTCTCGGTCTaGCTTTTCCCGCTCAGGGAGTCTGATTTTGTAGAA +
Preference number: 6 (lower is better)
Translates to: IERLPSGISFSV*LFPLRESDFVE
Trigger: TTCTACAAAATCAGACTCCCTGAGCGGGAAAAGCCAGACCGAGAAAGAAATGCCAGACGGGAGCCGCTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp GAGTCAGTTGCGCGTATGCTCAGCTTATATGCCGGGTaGGCCTCAAAGTCCAGAGGAGCTATGACATTGATA +
Preference number: 6 (lower is better)
Translates to: ESVARMLSLYAG*ASKSRGAMTLI
Trigger: TATCAATGTCATAGCTCCTCTGGACTTTGAGGCCCACCCGGCATATAAGCTGAGCATACGCGCAACTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp CACAGTCCCTTTATAGATCTCGGCCGTGAATCGTGGTaGACTATCGTTGACATCGGTGACGGTAACATCCAC +
Preference number: 6 (lower is better)
Translates to: HSPFIDLGRESW*TIVDIGDGNIH
Trigger: GTGGATGTTACCGTCACCGATGTCAACGATAGTCCACCACGATTCACGGCCGAGATCTATAAAGGGACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp GTCACTATGGAAGCATTGTCATCGCACGATTCGGACTaGAAGGAGCTCAGAGACTGCACTTCAGACAGGCTT +
Preference number: 6 (lower is better)
Translates to: VTMEALSSHDSD*KELRDCTSDRL
Trigger: AAGCCTGTCTGAAGTGCAGTCTCTGAGCTCCTTCCAGTCCGAATCGTGCGATGACAATGCTTCCATAGTGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509927.1
CDS CCA 72 bp GCAGCCAAAGATTCATTGTCATCGCACGATTCGGACTaGAAGGAGCTCAGAGACTGCACTTCAGACAGGCTT +
Preference number: 6 (lower is better)
Translates to: AAKDSLSSHDSD*KELRDCTSDRL
Trigger: AAGCCTGTCTGAAGTGCAGTCTCTGAGCTCCTTCCAGTCCGAATCGTGCGATGACAATGAATCTTTGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512772.5
CDS CAA 72 bp GACAATGTCACTGCTGTTATCACCGGAGCACATTCATaGGCCTGTTCGATGTGCACCGTTAGCTTGGCCATG +
Preference number: 6 (lower is better)
Translates to: DNVTAVITGAHS*ACSMCTVSLAM
Trigger: CATGGCCAAGCTAACGGTGCACATCGAACAGGCCAATGAATGTGCTCCGGTGATAACAGCAGTGACATTGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CAA 72 bp TCTGTGTCTGTAACAATTGAGTACGTCACGTGTCCGTaGGGCCCCAGGTCTTTATCTGTGGCTTCAACCTGG +
Preference number: 6 (lower is better)
Translates to: SVSVTIEYVTCP*GPRSLSVASTW
Trigger: CCAGGTTGAAGCCACAGATAAAGACCTGGGGCCCAACGGACACGTGACGTACTCAATTGTTACAGACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 90 bp AACGGCGTAGTAGGGAAGGTTGACAAACACCGGCGCATTATCATTTaGGTCTTCTACAATGACCTTCACGACAACGTGGGCCACTGCAGA +
Preference number: 6 (lower is better)
Translates to: NGVVGKVDKHRRIII*VFYNDLHDNVGHCR
Trigger: TCTGCAGTGGCCCACGTTGTCGTGAAGGTCATTGTAGAAGACCAAAATGATAATGCGCCGGTGTTTGTCAACCTTCCCTACTACGCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp TTGACTGGCCCGGCTTTGAACTGTGGAGAAGTCACGTaGATGACTTTAACAGAAGAGAACTGGGGCGGAGTT +
Preference number: 6 (lower is better)
Translates to: LTGPALNCGEVT*MTLTEENWGGV
Trigger: AACTCCGCCCCAGTTCTCTTCTGTTAAAGTCATTCACGTGACTTCTCCACAGTTCAAAGCCGGGCCAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS TCA 72 bp ATAAACCCGAGGCATCAGTTCGTAGTCCAGGTTTTCTaGCGTACTCACGGCACCAGTGAAATGGTCAATCGC +
Preference number: 6 (lower is better)
Translates to: INPRHQFVVQVF*RTHGTSEMVNR
Trigger: GCGATTGACCATTTCACTGGTGCCGTGAGTACGTCAGAAAACCTGGACTACGAACTGATGCCTCGGGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp CCGTTGGTTCCTGAGTCAGCATCAGATGCCCTGATCTaGATTACTCTACTTCCCCCTGGCAGGTTTTCAACA +
Preference number: 6 (lower is better)
Translates to: PLVPESASDALI*ITLLPPGRFST
Trigger: TGTTGAAAACCTGCCAGGGGGAAGTAGAGTAATTCAGATCAGGGCATCTGATGCTGACTCAGGAACCAACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp AGAATTCGGGGGCGTTATCGTTCACATCTTCTAGCGTaGGCACAATACTGGCTTGGCAGAATCTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: RIRGRYRSHLLA*AQYWLGRIFLL
Trigger: GAGGAGGAAGATTCTGCCAAGCCAGTATTGTGCTCACGCTAGAAGATGTGAACGATAACGCCCCCGAATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp CTCTGGGTGGACTGCCATTATCAGAAGCTTGAACCGTaGGCGTGTAACCTGAAATCGTTTCTCGGTCGAGAA +
Preference number: 6 (lower is better)
Translates to: LWVDCHYQKLEP*ACNLKSFLGRE
Trigger: TTCTCGACCGAGAAACGATTTCAGGTTACACGCTCACGGTTCAAGCTTCTGATAATGGCAGTCCACCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp GTAGCGGGTCCCAGGTGCTTGTCTTTAGGTTCAGCCTaGTGCTTCTTTTTCCGACTAATCATCTTACGGCAG +
Preference number: 6 (lower is better)
Translates to: VAGPRCLSLGSA*CFFFRLIILRQ
Trigger: CTGCCGTAAGATGATTAGTCGGAAAAAGAAGCATCAGGCTGAACCTAAAGACAAGCACCTGGGACCCGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000614102.4
CDS GCA 72 bp GGCTCTAACTTGAACAACAGACGTTCCAATTACAGATaGCTCAGACAGGGTCACCGCATAAGACTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: GSNLNNRRSNYR*LRQGHRIRLLS
Trigger: GCTCAGCAGTCTTATGCGGTGACCCTGTCTGAGGCATCTGTAATTGGAACGTCTGTTGTTCAAGTTAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp GCGTTAGAGCGGATGTCTGCGTCTGTAGCAGAGATCTaGATGATCAATTTTCCAGGAAGGACGTCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: ALERMSASVAEI*MINFPGRTSSG
Trigger: TCCTGAAGACGTCCTTCCTGGAAAATTGATCATGCAGATCTCTGCTACAGACGCAGACATCCGCTCTAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp TGCACAGACTCGGGGTTAAAAGTGCTGAATTCGGGATaGTCTGGGATAGCAGATCCTTCGAAGGAATTTCGG +
Preference number: 6 (lower is better)
Translates to: CTDSGLKVLNSG*SGIADPSKEFR
Trigger: CCGAAATTCCTTCGAAGGATCTGCTATCCCAGAGCATCCCGAATTCAGCACTTTTAACCCCGAGTCTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS CCA 72 bp CACCTGCCACGATGCTTAAAGATGCTATGTCACCATTaGCACCCTGATCGCAGTCATCCACTGTCACAATTG +
Preference number: 6 (lower is better)
Translates to: HLPRCLKMLCHH*HPDRSHPLSQL
Trigger: CAATTGTGACAGTGGATGACTGCGATCAGGGTGCCAATGGTGACATAGCATCTTTAAGCATCGTGGCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CCA 72 bp ACTCACAGTCCCTTTATAGATCTCGGCCGTGAATCGTaGTGGACTATCGTTGACATCGGTGACGGTAACATC +
Preference number: 6 (lower is better)
Translates to: THSPFIDLGRES*WTIVDIGDGNI
Trigger: GATGTTACCGTCACCGATGTCAACGATAGTCCACCACGATTCACGGCCGAGATCTATAAAGGGACTGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp AGACTCGGGGTTAAAAGTGCTGAATTCGGGATGCTCTaGGATAGCAGATCCTTCGAAGGAATTTCGGTCCAG +
Preference number: 6 (lower is better)
Translates to: RLGVKSAEFGML*DSRSFEGISVQ
Trigger: CTGGACCGAAATTCCTTCGAAGGATCTGCTATCCCAGAGCATCCCGAATTCAGCACTTTTAACCCCGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS CAA 72 bp CCTGAAATCGTTTCTCGGTCGAGAAGTTTGGTCACTTaGACTTCTCCCCTGACGGGGTCAATTGTGAACGAG +
Preference number: 6 (lower is better)
Translates to: PEIVSRSRSLVT*TSPLTGSIVNE
Trigger: CTCGTTCACAATTGACCCCGTCAGGGGAGAAGTCAAAGTGACCAAACTTCTCGACCGAGAAACGATTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp AGATATGTGTTAAGAGCCGGGTTTGAAGTACCAACTTaGCCTCCCCGGGATCTTCAGCATGTCCCTAACCAG +
Preference number: 6 (lower is better)
Translates to: RYVLRAGFEVPT*PPRDLQHVPNQ
Trigger: CTGGTTAGGGACATGCTGAAGATCCCGGGGAGGCAAAGTTGGTACTTCAAACCCGGCTCTTAACACATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509647.1
CDS CAA 90 bp GTTGTACTCGAGGTGTGTAAACTGCAGAGGAGTCTGTTCAAGTCGTaGGCTGCCATCACTGTCTCCAAAATGTTGGAAGAGAAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: VVLEVCKLQRSLFKS*AAITVSKMLEEKEQ
Trigger: CTGCTCCTTCTCTTCCAACATTTTGGAGACAGTGATGGCAGCCAACGACTTGAACAGACTCCTCTGCAGTTTACACACCTCGAGTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CAA 90 bp GTGATGTCGGCCACCGTCGTGAACTTCCCATCTGTTACGCTGACATaGAGAAGGTATTGCCCTATGTCTAGCTTTTTGTGTGCTATCAGC +
Preference number: 6 (lower is better)
Translates to: VMSATVVNFPSVTLT*RRYCPMSSFLCAIS
Trigger: GCTGATAGCACACAAAAAGCTAGACATAGGGCAATACCTTCTCAATGTCAGCGTAACAGATGGGAAGTTCACGACGGTGGCCGACATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp TCACCTGCAGTAAGTAATGATCTTTCTCCTTCCTCTTaGTGGCAGATGATGTCAGGAGGACTCCTTGCGGGT +
Preference number: 6 (lower is better)
Translates to: SPAVSNDLSPSS*WQMMSGGLLAG
Trigger: ACCCGCAAGGAGTCCTCCTGACATCATCTGCCATCAAGAGGAAGGAGAAAGATCATTACTTACTGCAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp GAGAATAACGGTCTCAAGTCATTTGTATCCAGCACCTaGACCCTGACCTTTGTTCGCGCCTCCACATTAGTA +
Preference number: 6 (lower is better)
Translates to: ENNGLKSFVSST*TLTFVRASTLV
Trigger: TACTAATGTGGAGGCGCGAACAAAGGTCAGGGTGCAGGTGCTGGATACAAATGACTTGAGACCGTTATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS GCA 72 bp TCCTTACTCCCTGGAAAGGACCTCACTGTTCTAAACTaGTGGAGAAGGTCACCTGCCACGATGCTTAAAGAT +
Preference number: 6 (lower is better)
Translates to: SLLPGKDLTVLN*WRRSPATMLKD
Trigger: ATCTTTAAGCATCGTGGCAGGTGACCTTCTCCAGCAGTTTAGAACAGTGAGGTCCTTTCCAGGGAGTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS GCA 72 bp GTCTTCTACAATGACCTTCACGACAACGTGGGCCACTaGAGAAGGCTTATGTTCCTCTGTCACTTCTACAAC +
Preference number: 6 (lower is better)
Translates to: VFYNDLHDNVGH*RRLMFLCHFYN
Trigger: GTTGTAGAAGTGACAGAGGAACATAAGCCTTCTGCAGTGGCCCACGTTGTCGTGAAGGTCATTGTAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp AGGCACATCTTGATCTCGTACCATGACCGTGAGGTGTaGTGGAACAGCTTCATGATCCAGTTTCTCAGAAGT +
Preference number: 6 (lower is better)
Translates to: RHILISYHDREV*WNSFMIQFLRS
Trigger: ACTTCTGAGAAACTGGATCATGAAGCTGTTCCAGCACACCTCACGGTCATGGTACGAGATCAAGATGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614102.4
CDS CCA 72 bp GCCACCGATGGCTTTGACTTTATACTCCTTACTCCCTaGAAAGGACCTCACTGTTCTAAACTGCTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: ATDGFDFILLTP*KGPHCSKLLEK
Trigger: CTTCTCCAGCAGTTTAGAACAGTGAGGTCCTTTCCAGGGAGTAAGGAGTATAAAGTCAAAGCCATCGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CCA 72 bp CTTCAAATGAAATGGGCTCCAGGGACGGTTTGGGCTTaGAGATCCATTCAATATGGAGTCTGGTGGTTGATG +
Preference number: 6 (lower is better)
Translates to: LQMKWAPGTVWA*RSIQYGVWWLM
Trigger: CATCAACCACCAGACTCCATATTGAATGGATCTCCAAGCCCAAACCGTCCCTGGAGCCCATTTCATTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp AACTTCCAGGGGCAGTCCAGTCCCGCGCAGAGTTTCTaGAATACATTCAGTATCCTAACTCCAATGATTTCC +
Preference number: 6 (lower is better)
Translates to: NFQGQSSPAQSF*NTFSILTPMIS
Trigger: GGAAATCATTGGAGTTAGGATACTGAATGTATTCCAGAAACTCTGCGCGGGACTGGACTGCCCCTGGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp TGTATGGCTGGGAAGGCTTTTCCTCTAGAGGCTTCTTaGAAAGACAGGGATCAAGATCCACCACTTTTGTGG +
Preference number: 6 (lower is better)
Translates to: CMAGKAFPLEAS*KDRDQDPPLLW
Trigger: CCACAAAAGTGGTGGATCTTGATCCCTGTCTTTCCAAGAAGCCTCTAGAGGAAAAGCCTTCCCAGCCATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507105.1
CDS CAA 72 bp GAGGTGTGTAAACTGCAGAGGAGTCTGTTCAAGTCGTaGGCTGCCATCACTGTCTCCAAAATGTTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: EVCKLQRSLFKS*AAITVSKMLEE
Trigger: CTCTTCCAACATTTTGGAGACAGTGATGGCAGCCAACGACTTGAACAGACTCCTCTGCAGTTTACACACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CAA 72 bp GTAGGGAAGGTTGACAAACACCGGCGCATTATCATTTaGGTCTTCTACAATGACCTTCACGACAACGTGGGC +
Preference number: 6 (lower is better)
Translates to: VGKVDKHRRIII*VFYNDLHDNVG
Trigger: GCCCACGTTGTCGTGAAGGTCATTGTAGAAGACCAAAATGATAATGCGCCGGTGTTTGTCAACCTTCCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp AATGGAGTCCATACAACCCCTGAAACCATTACCAACTaGAGGACTTCTTCCATGCCTTGTTCCCTGCTGACG +
Preference number: 6 (lower is better)
Translates to: NGVHTTPETITN*RTSSMPCSLLT
Trigger: CGTCAGCAGGGAACAAGGCATGGAAGAAGTCCTCAAGTTGGTAATGGTTTCAGGGGTTGTATGGACTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 90 bp TCTGTTACGCTGACATTGAGAAGGTATTGCCCTATGTCTAGCTTTTaGTGTGCTATCAGCTTGCCCCCTGTGCTGGAAACAGAGAACAGG +
Preference number: 6 (lower is better)
Translates to: SVTLTLRRYCPMSSF*CAISLPPVLETENR
Trigger: CCTGTTCTCTGTTTCCAGCACAGGGGGCAAGCTGATAGCACACAAAAAGCTAGACATAGGGCAATACCTTCTCAATGTCAGCGTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 90 bp TCATCAAAAGCAGCTTTGTACGCTGTCTGGGTAAATTCAGGGGGATaGCTATTTGCACCTAAGACTTTCACCAAGACCTTGGTGGACGCT +
Preference number: 6 (lower is better)
Translates to: SSKAALYAVWVNSGG*LFAPKTFTKTLVDA
Trigger: AGCGTCCACCAAGGTCTTGGTGAAAGTCTTAGGTGCAAATAGCAATCCCCCTGAATTTACCCAGACAGCGTACAAAGCTGCTTTTGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CAA 90 bp CTCATGACAGTAGTACCAATGGGCACGTTCTCATCAAAAGCAGCTTaGTACGCTGTCTGGGTAAATTCAGGGGGATTGCTATTTGCACCT +
Preference number: 6 (lower is better)
Translates to: LMTVVPMGTFSSKAA*YAVWVNSGGLLFAP
Trigger: AGGTGCAAATAGCAATCCCCCTGAATTTACCCAGACAGCGTACAAAGCTGCTTTTGATGAGAACGTGCCCATTGGTACTACTGTCATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CAA 90 bp GAAAATGTGTCTGTGTCTGTAACAATTGAGTACGTCACGTGTCCGTaGGGCCCCAGGTCTTTATCTGTGGCTTCAACCTGGATGATTTCA +
Preference number: 6 (lower is better)
Translates to: ENVSVSVTIEYVTCP*GPRSLSVASTWMIS
Trigger: TGAAATCATCCAGGTTGAAGCCACAGATAAAGACCTGGGGCCCAACGGACACGTGACGTACTCAATTGTTACAGACACAGACACATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 90 bp ATTCAAATAAATGGAGTCCATACAACCCCTGAAACCATTACCAACTaGAGGACTTCTTCCATGCCTTGTTCCCTGCTGACGGATGTGGCC +
Preference number: 6 (lower is better)
Translates to: IQINGVHTTPETITN*RTSSMPCSLLTDVA
Trigger: GGCCACATCCGTCAGCAGGGAACAAGGCATGGAAGAAGTCCTCAAGTTGGTAATGGTTTCAGGGGTTGTATGGACTCCATTTATTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp AAGGATGACTGTCCCAATCAATGCCACCGATGGCTTTaGCTTTATACTCCTTACTCCCTGGAAAGGACCTCA +
Preference number: 6 (lower is better)
Translates to: KDDCPNQCHRWL*LYTPYSLERTS
Trigger: TGAGGTCCTTTCCAGGGAGTAAGGAGTATAAAGTCAAAGCCATCGGTGGCATTGATTGGGACAGTCATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS TCA 72 bp CCAATAATGGGAGGTCGATTCACGGTCCAGTCGATCTaGCGTCTCTATGACACCTGTCTCTTCACCTATTTT +
Preference number: 6 (lower is better)
Translates to: PIMGGRFTVQSI*RLYDTCLFTYF
Trigger: AAAATAGGTGAAGAGACAGGTGTCATAGAGACGTCAGATCGACTGGACCGTGAATCGACCTCCCATTATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp GACATCCTCAACCTCTATGTAGATCTCTATGAACGATaGAAGAGGCACGACACCCTGATCGGTTGCAAAGAC +
Preference number: 6 (lower is better)
Translates to: DILNLYVDLYER*KRHDTLIGCKD
Trigger: GTCTTTGCAACCGATCAGGGTGTCGTGCCTCTTTCATCGTTCATAGAGATCTACATAGAGGTTGAGGATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp ACCTCTTGGACGAAACCACTCCAGTTTTCGGTTCGATaGAAAATTTGCCATGCTCATTCCCGTCTTCGATGC +
Preference number: 6 (lower is better)
Translates to: TSWTKPLQFSVR*KICHAHSRLRC
Trigger: GCATCGAAGACGGGAATGAGCATGGCAAATTTTTCATCGAACCGAAAACTGGAGTGGTTTCGTCCAAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp ATGCCAGGAGGCTCCACAGATATTACTCCAATCATGTaGGCAACGGGGTCACTTTCCATCACAGTAAAGGTA +
Preference number: 6 (lower is better)
Translates to: MPGGSTDITPIM*ATGSLSITVKV
Trigger: TACCTTTACTGTGATGGAAAGTGACCCCGTTGCTCACATGATTGGAGTAATATCTGTGGAGCCTCCTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp TTTATTCATGACAGTGATCGGAACGATAACTTCCGCTaGAAAGGCCGGGTTCCCTCCATCTTTTGCAACCAC +
Preference number: 6 (lower is better)
Translates to: FIHDSDRNDNFR*KGRVPSIFCNH
Trigger: GTGGTTGCAAAAGATGGAGGGAACCCGGCCTTTTCAGCGGAAGTTATCGTTCCGATCACTGTCATGAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp CTTGATGAGCTTTCTCCCCTAAAACCCGAATCACACTaGCAAACGGCGCCATCCAAACTGTCAAAGCATGTT +
Preference number: 6 (lower is better)
Translates to: LDELSPLKPESH*QTAPSKLSKHV
Trigger: AACATGCTTTGACAGTTTGGATGGCGCCGTTTGTCAGTGTGATTCGGGTTTTAGGGGAGAAAGCTCATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507662.1
CDS GCA 72 bp GTGGTCATTCGTGTCGCTGACATTGACCACAATCCTTaGAAAGTTGCGTTTTACAGGCACATCTTGATCTCG +
Preference number: 6 (lower is better)
Translates to: VVIRVADIDHNP*KVAFYRHILIS
Trigger: CGAGATCAAGATGTGCCTGTAAAACGCAACTTTGCAAGGATTGTGGTCAATGTCAGCGACACGAATGACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp AGGTGTGTAAACTGCAGAGGAGTCTGTTCAAGTCGTTaGCTGCCATCACTGTCTCCAAAATGTTGGAAGAGA +
Preference number: 6 (lower is better)
Translates to: RCVNCRGVCSSR*LPSLSPKCWKR
Trigger: TCTCTTCCAACATTTTGGAGACAGTGATGGCAGCCAACGACTTGAACAGACTCCTCTGCAGTTTACACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CCA 72 bp AATAGCTCTCCTGTAAAAACTCGGGTGGATTATCATTaGCATCGACAACCACGACATGTAGAAGACGCCACG +
Preference number: 6 (lower is better)
Translates to: NSSPVKTRVDYH*HRQPRHVEDAT
Trigger: CGTGGCGTCTTCTACATGTCGTGGTTGTCGATGCCAATGATAATCCACCCGAGTTTTTACAGGAGAGCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp ATGATTCTTCAAATGAAATGGGCTCCAGGGACGGTTTaGGCTTGGAGATCCATTCAATATGGAGTCTGGTGG +
Preference number: 6 (lower is better)
Translates to: MILQMKWAPGTV*AWRSIQYGVWW
Trigger: CCACCAGACTCCATATTGAATGGATCTCCAAGCCCAAACCGTCCCTGGAGCCCATTTCATTTGAAGAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp TCATTTTGGTCTTCTACAATGACCTTCACGACAACGTaGGCCACTGCAGAAGGCTTATGTTCCTCTGTCACT +
Preference number: 6 (lower is better)
Translates to: SFWSSTMTFTTT*ATAEGLCSSVT
Trigger: AGTGACAGAGGAACATAAGCCTTCTGCAGTGGCCCACGTTGTCGTGAAGGTCATTGTAGAAGACCAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp TGTATGGCTGGGAAGGCTTTTCCTCTAGAGGCTTCTTaGAAAGACAGGGATCAAGATCCACCACTTTTGTGT +
Preference number: 6 (lower is better)
Translates to: CMAGKAFPLEAS*KDRDQDPPLLC
Trigger: ACACAAAAGTGGTGGATCTTGATCCCTGTCTTTCCAAGAAGCCTCTAGAGGAAAAGCCTTCCCAGCCATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000512772.5
ENST00000614102.4
CDS CAA 72 bp GTAGTACCAATGGGCACGTTCTCATCAAAAGCAGCTTaGTACGCTGTCTGGGTAAATTCAGGGGGATTGCTA +
Preference number: 6 (lower is better)
Translates to: VVPMGTFSSKAA*YAVWVNSGGLL
Trigger: TAGCAATCCCCCTGAATTTACCCAGACAGCGTACAAAGCTGCTTTTGATGAGAACGTGCCCATTGGTACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CAA 72 bp TCTTCAAATGAAATGGGCTCCAGGGACGGTTTGGGCTaGGAGATCCATTCAATATGGAGTCTGGTGGTTGAT +
Preference number: 6 (lower is better)
Translates to: SSNEMGSRDGLG*EIHSIWSLVVD
Trigger: ATCAACCACCAGACTCCATATTGAATGGATCTCCAAGCCCAAACCGTCCCTGGAGCCCATTTCATTTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp CTGACATTGAGAAGGTATTGCCCTATGTCTAGCTTTTaGTGTGCTATCAGCTTGCCCCCTGTGCTGGAAACA +
Preference number: 6 (lower is better)
Translates to: LTLRRYCPMSSF*CAISLPPVLET
Trigger: TGTTTCCAGCACAGGGGGCAAGCTGATAGCACACAAAAAGCTAGACATAGGGCAATACCTTCTCAATGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp GCCACCGTCGTGAACTTCCCATCTGTTACGCTGACATaGAGAAGGTATTGCCCTATGTCTAGCTTTTTGTGT +
Preference number: 6 (lower is better)
Translates to: ATVVNFPSVTLT*RRYCPMSSFLC
Trigger: ACACAAAAAGCTAGACATAGGGCAATACCTTCTCAATGTCAGCGTAACAGATGGGAAGTTCACGACGGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 90 bp AATCGAAGAAAATATCCTCCACCTCTCCCTGGTTGTGTAATTTATTaGCCTGCAGGAGCTTCTCTGCCAGCATTTTGGCAACACCAGTCT +
Preference number: 6 (lower is better)
Translates to: NRRKYPPPLPGCVIY*PAGASLPAFWQHQS
Trigger: AGACTGGTGTTGCCAAAATGCTGGCAGAGAAGCTCCTGCAGGCAAATAAATTACACAACCAGGGAGAGGTGGAGGATATTTTCTTCGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp ACGATGCTTAAAGATGCTATGTCACCATTGGCACCCTaGTCGCAGTCATCCACTGTCACAATTGCATATGCT +
Preference number: 6 (lower is better)
Translates to: TMLKDAMSPLAP*SQSSTVTIAYA
Trigger: AGCATATGCAATTGTGACAGTGGATGACTGCGATCAGGGTGCCAATGGTGACATAGCATCTTTAAGCATCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS TCA 72 bp ACCTCAAATGGGAATAAGCAGGAATGGCCTTTACCATaGCCACAGGTGTGTTGGGAGGAGCAAATTCACTTA +
Preference number: 6 (lower is better)
Translates to: TSNGNKQEWPLP*PQVCWEEQIHL
Trigger: TAAGTGAATTTGCTCCTCCCAACACACCTGTGGTCATGGTAAAGGCCATTCCTGCTTATTCCCATTTGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS TCA 72 bp CGTAGTCCAGGTTTTCTGACGTACTCACGGCACCAGTaGAATGGTCAATCGCAAACGGCACATGATTTAAAT +
Preference number: 6 (lower is better)
Translates to: RSPGFLTYSRHQ*NGQSQTAHDLN
Trigger: ATTTAAATCATGTGCCGTTTGCGATTGACCATTTCACTGGTGCCGTGAGTACGTCAGAAAACCTGGACTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp GGTTCCATCTGTAGCCTCGACTGTGAGGTTGTAGTTTaGCTTCTGTTCTGCATCAAGAGGTTTGGCAACAAT +
Preference number: 6 (lower is better)
Translates to: GSICSLDCEVVV*LLFCIKRFGNN
Trigger: ATTGTTGCCAAACCTCTTGATGCAGAACAGAAGTCAAACTACAACCTCACAGTCGAGGCTACAGATGGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp CCTGCCCATTCAAATAAATGGAGTCCATACAACCCCTaGAACCATTACCAACTTGAGGACTTCTTCCATGCC +
Preference number: 6 (lower is better)
Translates to: PAHSNKWSPYNP*NHYQLEDFFHA
Trigger: GGCATGGAAGAAGTCCTCAAGTTGGTAATGGTTTCAGGGGTTGTATGGACTCCATTTATTTGAATGGGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp AGTTCATCTGCATCAATAGCAGAAACAGTGGTTATTTaGTCTCCCACGCCTAGATCTCTGGGAATTGTCCCT +
Preference number: 6 (lower is better)
Translates to: SSSASIAETVVI*SPTPRSLGIVP
Trigger: AGGGACAATTCCCAGAGATCTAGGCGTGGGAGAGCAAATAACCACTGTTTCTGCTATTGATGCAGATGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp TTCCTCTTGATGGCAGATGATGTCAGGAGGACTCCTTaGGGGTTAACTTCAAAAGCCTTCTCATCATTTCCA +
Preference number: 6 (lower is better)
Translates to: FLLMADDVRRTP*GLTSKAFSSFP
Trigger: TGGAAATGATGAGAAGGCTTTTGAAGTTAACCCGCAAGGAGTCCTCCTGACATCATCTGCCATCAAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp CCAGTTACAATAGTAAAGAAGAAGGGTGGACCGTTATaGGAAGAATCCTCATCTGTTACTACCAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PVTIVKKKGGPL*EESSSVTTSCS
Trigger: GCTGCAGCTGGTAGTAACAGATGAGGATTCTTCCCATAACGGTCCACCCTTCTTCTTTACTATTGTAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp CACATCTTGATCTCGTACCATGACCGTGAGGTGTGCTaGAACAGCTTCATGATCCAGTTTCTCAGAAGTATA +
Preference number: 6 (lower is better)
Translates to: HILISYHDREVC*NSFMIQFLRSI
Trigger: TATACTTCTGAGAAACTGGATCATGAAGCTGTTCCAGCACACCTCACGGTCATGGTACGAGATCAAGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614102.4
CDS CAA 72 bp AAATATCCTCCACCTCTCCCTGGTTGTGTAATTTATTaGCCTGCAGGAGCTTCTCTGCCAGCATTTTGGCAA +
Preference number: 6 (lower is better)
Translates to: KYPPPLPGCVIY*PAGASLPAFWQ
Trigger: TTGCCAAAATGCTGGCAGAGAAGCTCCTGCAGGCAAATAAATTACACAACCAGGGAGAGGTGGAGGATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp AATGATTCTTCAAATGAAATGGGCTCCAGGGACGGTTaGGGCTTGGAGATCCATTCAATATGGAGTCTGGTG +
Preference number: 6 (lower is better)
Translates to: NDSSNEMGSRDG*GLEIHSIWSLV
Trigger: CACCAGACTCCATATTGAATGGATCTCCAAGCCCAAACCGTCCCTGGAGCCCATTTCATTTGAAGAATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 90 bp CACTTGGATACTAACATCTACAGAAGCCACCATCTCATGGTCATCTaGAGTGCACCTGGCCAGTATGGAAAACTGATACCACTTAGTTGT +
Preference number: 6 (lower is better)
Translates to: HLDTNIYRSHHLMVI*SAPGQYGKLIPLSC
Trigger: ACAACTAAGTGGTATCAGTTTTCCATACTGGCCAGGTGCACTCAAGATGACCATGAGATGGTGGCTTCTGTAGATGTTAGTATCCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp ATGGCAAAGGATTCAATGACTTCCACACTTTGTGACTaGTCCAGGCTATACATAACTTGGCCGTTGGTTCCT +
Preference number: 6 (lower is better)
Translates to: MAKDSMTSTLCD*SRLYITWPLVP
Trigger: AGGAACCAACGGCCAAGTTATGTATAGCCTGGATCAGTCACAAAGTGTGGAAGTCATTGAATCCTTTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp CGAGGGGATAAAAATTGGGCAAATACTGATTCAAGTTaGACCTCTGCCGGTTTCTTGATGAAGAACCCAAGC +
Preference number: 6 (lower is better)
Translates to: RGDKNWANTDSS*TSAGFLMKNPS
Trigger: GCTTGGGTTCTTCATCAAGAAACCGGCAGAGGTTCAACTTGAATCAGTATTTGCCCAATTTTTATCCCCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000507105.1
ENST00000512772.5
ENST00000614102.4
CDS GCA 72 bp ATGTTCTTATTTAGCTTGGAATCAAAATACGGTCTTTaGAAGAAAGCCGTAGCGGGTCCCAGGTGCTTGTCT +
Preference number: 6 (lower is better)
Translates to: MFLFSLESKYGL*KKAVAGPRCLS
Trigger: AGACAAGCACCTGGGACCCGCTACGGCTTTCTTGCAAAGACCGTATTTTGATTCCAAGCTAAATAAGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000500085.2
ENST00000614102.4
CDS CCA 72 bp GTCTCCGGAAACAATTTTGTACCTTACTTCCCACGCTaGATGTGTAATGTAAACACCCATCTTGACAGGATG +
Preference number: 6 (lower is better)
Translates to: VSGNNFVPYFPR*MCNVNTHLDRM
Trigger: CATCCTGTCAAGATGGGTGTTTACATTACACATCCAGCGTGGGAAGTAAGGTACAAAATTGTTTCCGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CCA 72 bp TCAAAGACCGGGCTGTTGTCATTTGCATCTTTCACTTaGATACTAACATCTACAGAAGCCACCATCTCATGG +
Preference number: 6 (lower is better)
Translates to: SKTGLLSFASFT*ILTSTEATISW
Trigger: CCATGAGATGGTGGCTTCTGTAGATGTTAGTATCCAAGTGAAAGATGCAAATGACAACAGCCCGGTCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp CAAGTAGAAGACAGAGAAACTGGCTTTCCCTTGTCTTaGGCCCTCACAGTGAGATTATACACTTGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: QVEDRETGFPLS*ALTVRLYTCFF
Trigger: GAAGAAGCAAGTGTATAATCTCACTGTGAGGGCCAAAGACAAGGGAAAGCCAGTTTCTCTGTCTTCTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 90 bp TGGACTAGATTCAAAGACCGGGCTGTTGTCATTTGCATCTTTCACTaGGATACTAACATCTACAGAAGCCACCATCTCATGGTCATCTTG +
Preference number: 6 (lower is better)
Translates to: WTRFKDRAVVICIFH*DTNIYRSHHLMVIL
Trigger: CAAGATGACCATGAGATGGTGGCTTCTGTAGATGTTAGTATCCAAGTGAAAGATGCAAATGACAACAGCCCGGTCTTTGAATCTAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp GTTAATGGCAAAGGATTCAATGACTTCCACACTTTGTaGCTGATCCAGGCTATACATAACTTGGCCGTTGGT +
Preference number: 6 (lower is better)
Translates to: VNGKGFNDFHTL*LIQAIHNLAVG
Trigger: ACCAACGGCCAAGTTATGTATAGCCTGGATCAGTCACAAAGTGTGGAAGTCATTGAATCCTTTGCCATTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp GGTTTCTCTACAAAAAGTAAGACGTCCAGATGTGGGTaGGGTTCAGAGGACTGCAAACTAACAATCTGTATG +
Preference number: 6 (lower is better)
Translates to: GFSTKSKTSRCG*GSEDCKLTICM
Trigger: CATACAGATTGTTAGTTTGCAGTCCTCTGAACCTCACCCACATCTGGACGTCTTACTTTTTGTAGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp AACTTCCCATCTGTTACGCTGACATTGAGAAGGTATTaGCCTATGTCTAGCTTTTTGTGTGCTATCAGCTTG +
Preference number: 6 (lower is better)
Translates to: NFPSVTLTLRRY*PMSSFLCAISL
Trigger: CAAGCTGATAGCACACAAAAAGCTAGACATAGGGCAATACCTTCTCAATGTCAGCGTAACAGATGGGAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp ATCCTTTTCAAACTTGACTGGCCCGGCTTTGAACTGTaGAGAAGTCACGTGAATGACTTTAACAGAAGAGAA +
Preference number: 6 (lower is better)
Translates to: ILFKLDWPGFEL*RSHVNDFNRRE
Trigger: TTCTCTTCTGTTAAAGTCATTCACGTGACTTCTCCACAGTTCAAAGCCGGGCCAGTCAAGTTTGAAAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CCA 72 bp TATTTCTGCTCTGTAAACATCCTTTTCAAACTTGACTaGCCCGGCTTTGAACTGTGGAGAAGTCACGTGAAT +
Preference number: 6 (lower is better)
Translates to: YFCSVNILFKLD*PGFELWRSHVN
Trigger: ATTCACGTGACTTCTCCACAGTTCAAAGCCGGGCCAGTCAAGTTTGAAAAGGATGTTTACAGAGCAGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CCA 72 bp AAATTTTCTCCATCTGTAGCTGTGATTCTCAGACTGTaGAAAGACACCTTTGCACCTAAGCCATCCATTAGC +
Preference number: 6 (lower is better)
Translates to: KFSPSVAVILRL*KDTFAPKPSIS
Trigger: GCTAATGGATGGCTTAGGTGCAAAGGTGTCTTTCCACAGTCTGAGAATCACAGCTACAGATGGAGAAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp GGATTGCTATTTGCACCTAAGACTTTCACCAAGACCTaGGTGGACGCTTTTCTGTCACTTGTTGTTACTTCA +
Preference number: 6 (lower is better)
Translates to: GLLFAPKTFTKT*VDAFLSLVVTS
Trigger: TGAAGTAACAACAAGTGACAGAAAAGCGTCCACCAAGGTCTTGGTGAAAGTCTTAGGTGCAAATAGCAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS TCA 72 bp AATCAGCCATACAGCATGTCCTTACGCCAGTATCTATaGCAATTCCAAATGGCTGAGAAATGTATGTACCAC +
Preference number: 6 (lower is better)
Translates to: NQPYSMSLRQYL*QFQMAEKCMYH
Trigger: GTGGTACATACATTTCTCAGCCATTTGGAATTGTCATAGATACTGGCGTAAGGACATGCTGTATGGCTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509537.1
CDS GCA 72 bp GTAGGTGATTTCTGCATTTGCTTCAATATCCCGACTTaGTGCATACACTTGAAGAACTTCAGTTCCAACAAG +
Preference number: 6 (lower is better)
Translates to: VGDFCICFNIPT*CIHLKNFSSNK
Trigger: CTTGTTGGAACTGAAGTTCTTCAAGTGTATGCAGCAAGTCGGGATATTGAAGCAAATGCAGAAATCACCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CCA 72 bp TGCTATTTGCACCTAAGACTTTCACCAAGACCTTGGTaGACGCTTTTCTGTCACTTGTTGTTACTTCAAGTT +
Preference number: 6 (lower is better)
Translates to: CYLHLRLSPRPW*TLFCHLLLLQV
Trigger: AACTTGAAGTAACAACAAGTGACAGAAAAGCGTCCACCAAGGTCTTGGTGAAAGTCTTAGGTGCAAATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CCA 72 bp GATTGCTATTTGCACCTAAGACTTTCACCAAGACCTTaGTGGACGCTTTTCTGTCACTTGTTGTTACTTCAA +
Preference number: 6 (lower is better)
Translates to: DCYLHLRLSPRP*WTLFCHLLLLQ
Trigger: TTGAAGTAACAACAAGTGACAGAAAAGCGTCCACCAAGGTCTTGGTGAAAGTCTTAGGTGCAAATAGCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CCA 72 bp AATTTTGTACATGAGCTTGTCATTAGAGCTCGAATCTaGATCAAATGCCTCGATCTGGACCACAGATACATC +
Preference number: 6 (lower is better)
Translates to: NFVHELVIRARI*IKCLDLDHRYI
Trigger: GATGTATCTGTGGTCCAGATCGAGGCATTTGATCCAGATTCGAGCTCTAATGACAAGCTCATGTACAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 90 bp AATTCAGGGGGATTGCTATTTGCACCTAAGACTTTCACCAAGACCTaGGTGGACGCTTTTCTGTCACTTGTTGTTACTTCAAGTTCAAAA +
Preference number: 6 (lower is better)
Translates to: NSGGLLFAPKTFTKT*VDAFLSLVVTSSSK
Trigger: TTTTGAACTTGAAGTAACAACAAGTGACAGAAAAGCGTCCACCAAGGTCTTGGTGAAAGTCTTAGGTGCAAATAGCAATCCCCCTGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441802.7
ENST00000509647.1
ENST00000614102.4
CDS CAA 90 bp TCACAATTTATTTTCTCAAACAAAGGTGTGTTGTCATTCAAGTTATaGAGAGTAATTGTAGCAAGGACTTCGACTTCCCGGCGGTACGGC +
Preference number: 6 (lower is better)
Translates to: SQFIFSNKGVLSFKL*RVIVARTSTSRRYG
Trigger: GCCGTACCGCCGGGAAGTCGAAGTCCTTGCTACAATTACTCTCAATAACTTGAATGACAACACACCTTTGTTTGAGAAAATAAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 90 bp TCAACAATGAATGCCTCATATGGACTAGATTCAAAGACCGGGCTGTaGTCATTTGCATCTTTCACTTGGATACTAACATCTACAGAAGCC +
Preference number: 6 (lower is better)
Translates to: STMNASYGLDSKTGL*SFASFTWILTSTEA
Trigger: GGCTTCTGTAGATGTTAGTATCCAAGTGAAAGATGCAAATGACAACAGCCCGGTCTTTGAATCTAGTCCATATGAGGCATTCATTGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 90 bp TGTCCTAAAGGATCCCCTCCTGTTATGAAATATGTAACTTGTCTGTaGATCTCTTCAGAATCAGCATCCGTGGTACTTAAGATGGCAATC +
Preference number: 6 (lower is better)
Translates to: CPKGSPPVMKYVTCL*ISSESASVVLKMAI
Trigger: GATTGCCATCTTAAGTACCACGGATGCTGATTCTGAAGAGATCAACAGACAAGTTACATATTTCATAACAGGAGGGGATCCTTTAGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp TGGCGCTGTATCTTCAGGAATAACAACTTCATACTTTaGTGTAGAAAACTGAGGACGATGGTCATTTGTGTC +
Preference number: 6 (lower is better)
Translates to: WRCIFRNNNFIL*CRKLRTMVICV
Trigger: GACACAAATGACCATCGTCCTCAGTTTTCTACATCAAAGTATGAAGTTGTTATTCCTGAAGATACAGCGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp CACGGAAGAGTTAATCTTGTGCAGAAGTTGTTTTGTTaGGATCTGAGCACTACCTGGTTTCTCTACAAAAAG +
Preference number: 6 (lower is better)
Translates to: HGRVNLVQKLFC*DLSTTWFLYKK
Trigger: CTTTTTGTAGAGAAACCAGGTAGTGCTCAGATCTCAACAAAACAACTTCTGCACAAGATTAACTCTTCCGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp GGGAAAACGTCTATTTGCTTAATGAAAAGCCCAGCATaGCTGGCTCTCTGTTTGGAAAGAATAAATTTGACG +
Preference number: 6 (lower is better)
Translates to: GKTSICLMKSPA*LALCLERINLT
Trigger: CGTCAAATTTATTCTTTCCAAACAGAGAGCCAGTCATGCTGGGCTTTTCATTAAGCAAATAGACGTTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503253.1
CDS GCA 72 bp ATATGGACTAGATTCAAAGACCGGGCTGTTGTCATTTaGATCTTTCACTTGGATACTAACATCTACAGAAGC +
Preference number: 6 (lower is better)
Translates to: IWTRFKDRAVVI*IFHLDTNIYRS
Trigger: GCTTCTGTAGATGTTAGTATCCAAGTGAAAGATGCAAATGACAACAGCCCGGTCTTTGAATCTAGTCCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS GCA 72 bp GGTGATTTCTGCATTTGCTTCAATATCCCGACTTGCTaGATACACTTGAAGAACTTCAGTTCCAACAAGAAT +
Preference number: 6 (lower is better)
Translates to: GDFCICFNIPTC*IHLKNFSSNKN
Trigger: ATTCTTGTTGGAACTGAAGTTCTTCAAGTGTATGCAGCAAGTCGGGATATTGAAGCAAATGCAGAAATCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp AATGCCTCATATGGACTAGATTCAAAGACCGGGCTGTaGTCATTTGCATCTTTCACTTGGATACTAACATCT +
Preference number: 6 (lower is better)
Translates to: NASYGLDSKTGL*SFASFTWILTS
Trigger: AGATGTTAGTATCCAAGTGAAAGATGCAAATGACAACAGCCCGGTCTTTGAATCTAGTCCATATGAGGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp GAGTTAATCTTGTGCAGAAGTTGTTTTGTTGAGATCTaGGCACTACCTGGTTTCTCTACAAAAAGTAAGACG +
Preference number: 6 (lower is better)
Translates to: ELILCRSCFVEI*ALPGFSTKSKT
Trigger: CGTCTTACTTTTTGTAGAGAAACCAGGTAGTGCTCAGATCTCAACAAAACAACTTCTGCACAAGATTAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp ATTTTCTCAAACAAAGGTGTGTTGTCATTCAAGTTATaGAGAGTAATTGTAGCAAGGACTTCGACTTCCCGG +
Preference number: 6 (lower is better)
Translates to: IFSNKGVLSFKL*RVIVARTSTSR
Trigger: CCGGGAAGTCGAAGTCCTTGCTACAATTACTCTCAATAACTTGAATGACAACACACCTTTGTTTGAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp AAATCATACTCCGCTTGGTTACTTCGATCTAATTCTTaGGCAGTTTTAATAGAGCCCAAGACAGGATCAATC +
Preference number: 6 (lower is better)
Translates to: KSYSAWLLRSNS*AVLIEPKTGSI
Trigger: GATTGATCCTGTCTTGGGCTCTATTAAAACTGCCAAAGAATTAGATCGAAGTAACCAAGCGGAGTATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 72 bp ACAGAATATTCTTTTGATGTAAACTTCGGAGAGGCGTaGTCAGCAATTGTGACAAAGATACGCACAGAAGTT +
Preference number: 6 (lower is better)
Translates to: TEYSFDVNFGEA*SAIVTKIRTEV
Trigger: AACTTCTGTGCGTATCTTTGTCACAATTGCTGACAACGCCTCTCCGAAGTTTACATCAAAAGAATATTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS CAA 90 bp CTAAGTTCAACAGAATATTCTTTTGATGTAAACTTCGGAGAGGCGTaGTCAGCAATTGTGACAAAGATACGCACAGAAGTTATTTCACTC +
Preference number: 6 (lower is better)
Translates to: LSSTEYSFDVNFGEA*SAIVTKIRTEVISL
Trigger: GAGTGAAATAACTTCTGTGCGTATCTTTGTCACAATTGCTGACAACGCCTCTCCGAAGTTTACATCAAAAGAATATTCTGTTGAACTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp TATGCTGAATTTCCCATGTTCATTTCCACTTATTATTaGGTAGGTGATTTCTGCATTTGCTTCAATATCCCG +
Preference number: 6 (lower is better)
Translates to: YAEFPMFISTYY*VGDFCICFNIP
Trigger: CGGGATATTGAAGCAAATGCAGAAATCACCTACTCAATAATAAGTGGAAATGAACATGGGAAATTCAGCATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441802.7
ENST00000614102.4
CDS TCA 72 bp CTCATAATCCAGATTCTCAATGATAAATACGGCCCCTaGATAGAAATCAAAATTACTTCCAGCATTCTGCAA +
Preference number: 6 (lower is better)
Translates to: LIIQILNDKYGP*IEIKITSSILQ
Trigger: TTGCAGAATGCTGGAAGTAATTTTGATTTCTATTCAGGGGCCGTATTTATCATTGAGAATCTGGATTATGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508035.1