RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FASTKD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000124279

Ensembl transcript IDs: ENST00000264669.10, ENST00000504695.1, ENST00000507036.1, ENST00000507572.1, ENST00000511261.5, ENST00000513658.5

Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCTCCAAGACTCTCCTAAGCTCCTCGTTAGTGAAATGTGGGACATaGCTCACGACATATTTGCCCAATTTTATAATCAGAGGAAATGCT +
Preference number: 1 (lower is better)
Translates to: ASKTLLSSSLVKCGT*LTTYLPNFIIRGNA
Trigger: AGCATTTCCTCTGATTATAAAATTGGGCAAATATGTCGTGAGGCATGTCCCACATTTCACTAACGAGGAGCTTAGGAGAGTCTTGGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR CCA 90 bp TATGAACGCCTCCAAGACTCTCCTAAGCTCCTCGTTAGTGAAATGTaGGACATGCCTCACGACATATTTGCCCAATTTTATAATCAGAGG +
Preference number: 1 (lower is better)
Translates to: YERLQDSPKLLVSEM*DMPHDIFAQFYNQR
Trigger: CCTCTGATTATAAAATTGGGCAAATATGTCGTGAGGCATGTCCCACATTTCACTAACGAGGAGCTTAGGAGAGTCTTGGAGGCGTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR GCA 90 bp GACATGCCTCACGACATATTTGCCCAATTTTATAATCAGAGGAAATaGTTGACTTTGATCAAGAACCACCAGGGCAGTGAGCATTTGGCT +
Preference number: 1 (lower is better)
Translates to: DMPHDIFAQFYNQRK*LTLIKNHQGSEHLA
Trigger: AGCCAAATGCTCACTGCCCTGGTGGTTCTTGATCAAAGTCAAGCATTTCCTCTGATTATAAAATTGGGCAAATATGTCGTGAGGCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR TCA 90 bp GCCACTGCATTGAGGATGGGTTTTGAAAGAATCAGTTCTCTACTGCAGTACTCCGGTGCCCAAAATATATaGACGCCTCCAAGACTCTCC +
Preference number: 2 (lower is better)
Translates to: ATALRMGFERISSLLQYSGAQNI*TPPRLS
Trigger: GGAGAGTCTTGGAGGCGTTCATATATTTTGGGCACC...GGAGTACTGCAGTAGAGAACTGATTCTTTCAAAACCCATCCTCAATGCAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR CCA 90 bp CTCCATGACCCTGCAGACAACTTCAGGATCCAACGTGAGGCACACCGCAGCTACAGTGCTATCCTTTTATaGATATCTTCATTAGCTGTG +
Preference number: 2 (lower is better)
Translates to: LHDPADNFRIQREAHRSYSAILL*ISSLAV
Trigger: CACAGCTAATGAAGATATCCATAAAAGGATAGCACT...GTAGCTGCGGTGTGCCTCACGTTGGATCCTGAAGTTGTCTGCAGGGTCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR CCA 90 bp ATTCCAGGACTGAGGCTAAGAAAAGTTGGGTCAGTTGTGCCCGACTCAATGTGTAGCAGAGGCATTTGGTaGCAAATAATTGAGTTTCCC +
Preference number: 2 (lower is better)
Translates to: IPGLRLRKVGSVVPDSMCSRGIW*QIIEFP
Trigger: GGGAAACTCAATTATTTGCCACCAAATGCCTCTGCT...ACACATTGAGTCGGGCACAACTGACCCAACTTTTCTTAGCCTCAGTCCTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR GCA 90 bp TTGAGGATGGGTTTTGAAAGAATCAGTTCTCTACTGCAGTACTCCATGACCCTGACCGCAGCTACACGATaGTCTAGGGCTTTTGTAAAA +
Preference number: 2 (lower is better)
Translates to: LRMGFERISSLLQYSMTLTAATR*SRAFVK
Trigger: TTTTACAAAAGCCCTAGAGCATCGTGTAGCTGCGGT...CAGGGTCATGGAGTACTGCAGTAGAGAACTGATTCTTTCAAAACCCATCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR GCA 90 bp GTTGTGCCCGACTCAATGTGTCCAAATGAGATTCTTTACCTTGCAGCCGTTGAATCCCCAGTAAGTGTTTaGTATTGGAGCAAAACCTTT +
Preference number: 2 (lower is better)
Translates to: VVPDSMCPNEILYLAAVESPVSV*YWSKTF
Trigger: AAAGGTTTTGCTCCAATAGCAAACACTTACTGGGGA...TTCAACGGCTGCAAGGTAAAGAATCTCATTTGGACACATTGAGTCGGGCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR CCA 90 bp TTGAGGATGGGTTTTGAAAGAATCAGTTCTCTACTGCAGTACTCCATGACCCTGGGAGCAAAACCTTTTTaGACCATCAATACACAGTGC +
Preference number: 2 (lower is better)
Translates to: LRMGFERISSLLQYSMTLGAKPF*TINTQC
Trigger: GCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCC...CAGGGTCATGGAGTACTGCAGTAGAGAACTGATTCTTTCAAAACCCATCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR GCA 90 bp ATTCCAGGACTGAGGCTAAGAAAAGTTGGGTCAGTTGTGCCCGACTCAATGTGTACCATCAATACACAGTaGTATCCTTTTATGGATATC +
Preference number: 2 (lower is better)
Translates to: IPGLRLRKVGSVVPDSMCTINTQ*YPFMDI
Trigger: GATATCCATAAAAGGATAGCACTGTGTATTGATGGT...ACACATTGAGTCGGGCACAACTGACCCAACTTTTCTTAGCCTCAGTCCTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR CCA 90 bp AAAATATATGAACGCCTCCAAGACTCTCCTAAGCTCCTCGTTAGTGAAATGTGGAGGGCAGTGAGCATTTaGCTAATCAATTTAGGACTC +
Preference number: 2 (lower is better)
Translates to: KIYERLQDSPKLLVSEMWRAVSI*LINLGL
Trigger: GAGTCCTAAATTGATTAGCCAAATGCTCACTGCCCT...CCACATTTCACTAACGAGGAGCTTAGGAGAGTCTTGGAGGCGTTCATATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR CAA 90 bp ATGCCTCACGACATATTTGCCCAATTTTATAATCAGAGGAAATGCTaGACTTTGATCAAGAACCACCAGGGCAGTGAGCATTTGGCTAAT +
Preference number: 2 (lower is better)
Translates to: MPHDIFAQFYNQRKC*TLIKNHQGSEHLAN
Trigger: ATTAGCCAAATGCTCACTGCCCTGGTGGTTCTTGATCAAAGTCAAGCATTTCCTCTGATTATAAAATTGGGCAAATATGTCGTGAGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR GCA 90 bp TCATGGTGCCCAAAATATATGAACGCCTCCAAGACTCTCCTAAGCTCCTCGTTACACTTTTTCAGTACATaGCTGCAAGATTCTATAAAG +
Preference number: 2 (lower is better)
Translates to: SWCPKYMNASKTLLSSSLHFFST*LQDSIK
Trigger: CTTTATAGAATCTTGCAGGCATGTACTGAAAAAGTG...TAACGAGGAGCTTAGGAGAGTCTTGGAGGCGTTCATATATTTTGGGCACCATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR CAA 90 bp ACCACCAGGGCAGTGAGCATTTGGCTAATCAATTTAGGACTCAGGTaGGAAACTATTGATAGGGAAAAGTTGTTTATCTTATTTAAAAAT +
Preference number: 2 (lower is better)
Translates to: TTRAVSIWLINLGLR*ETIDREKLFILFKN
Trigger: ATTTTTAAATAAGATAAACAACTTTTCCCTATCAATAGTTTCCAACCTGAGTCCTAAATTGATTAGCCAAATGCTCACTGCCCTGGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR CAA 90 bp GCAGTACTCCATGACCCTGCAGACAACTTCAGGATCCAACGTGAGGCACACCGCCAGGGCAGTGAGCATTaGGCTAATCAATTTAGGACT +
Preference number: 3 (lower is better)
Translates to: AVLHDPADNFRIQREAHRQGSEH*ANQFRT
Trigger: AGTCCTAAATTGATTAGCCAAATGCTCACTGCCCTG...GCGGTGTGCCTCACGTTGGATCCTGAAGTTGTCTGCAGGGTCATGGAGTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR CAA 90 bp CTCCATGACCCTGCAGACAACTTCAGGATCCAACGTGAGGCACACCGCAGCTACTTCCCCAGTAAGTGTTaGCTATTGGAGCAAAACCTT +
Preference number: 3 (lower is better)
Translates to: LHDPADNFRIQREAHRSYFPSKC*LLEQNL
Trigger: AAGGTTTTGCTCCAATAGCAAACACTTACTGGGGAA...GTAGCTGCGGTGTGCCTCACGTTGGATCCTGAAGTTGTCTGCAGGGTCATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR CAA 90 bp CTCCTAAGCTCCTCGTTAGTGAAATGTGGGACATGCCTCACGACATATTTGCCCAATCAGAGGAAATGCTaGACTTTGATCAAGAACCAC +
Preference number: 3 (lower is better)
Translates to: LLSSSLVKCGTCLTTYLPNQRKC*TLIKNH
Trigger: GTGGTTCTTGATCAAAGTCAAGCATTTCCTCTGATT...GGGCAAATATGTCGTGAGGCATGTCCCACATTTCACTAACGAGGAGCTTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR CAA 90 bp TCATGGTGCCCAAAATATATGAACGCCTCCAAGACTCTCCTAAGCTCCTCGTTATGGAGCAAAACCTTTTaGGACCATCAATACACAGTG +
Preference number: 3 (lower is better)
Translates to: SWCPKYMNASKTLLSSSLWSKTF*DHQYTV
Trigger: CACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCA...TAACGAGGAGCTTAGGAGAGTCTTGGAGGCGTTCATATATTTTGGGCACCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR CAA 90 bp AAAATATATGAACGCCTCCAAGACTCTCCTAAGCTCCTCGTTAGTGAAATGTGGAGGAAATGCTTGACTTaGATCAAGAACCACCAGGGC +
Preference number: 3 (lower is better)
Translates to: KIYERLQDSPKLLVSEMWRKCLT*IKNHQG
Trigger: GCCCTGGTGGTTCTTGATCAAAGTCAAGCATTTCCT...CCACATTTCACTAACGAGGAGCTTAGGAGAGTCTTGGAGGCGTTCATATATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR CCA 72 bp CTCCAAGACTCTCCTAAGCTCCTCGTTAGTGAAATGTaGGACATGCCTCACGACATATTTGCCCAATTTTAT +
Preference number: 3 (lower is better)
Translates to: LQDSPKLLVSEM*DMPHDIFAQFY
Trigger: ATAAAATTGGGCAAATATGTCGTGAGGCATGTCCCACATTTCACTAACGAGGAGCTTAGGAGAGTCTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR CAA 90 bp GCCACTGCATTGAGGATGGGTTTTGAAAGAATCAGTTCTCTACTGCAGTACTCCAGTCAGTATTCATTCTaGCAACCAATGAACAGTGTT +
Preference number: 3 (lower is better)
Translates to: ATALRMGFERISSLLQYSSQYSF*QPMNSV
Trigger: AACACTGTTCATTGGTTGCAAGAATGAATACTGACT...GGAGTACTGCAGTAGAGAACTGATTCTTTCAAAACCCATCCTCAATGCAGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR-3UTR CAA 90 bp TCATGGTGCCCAAAATATATGAACGCCTCCAAGACTCTCCTAAGCTCCTCGTTATGCCTCACGACATATTaGCCCAATTTTATAATCAGA +
Preference number: 3 (lower is better)
Translates to: SWCPKYMNASKTLLSSSLCLTTY*PNFIIR
Trigger: TCTGATTATAAAATTGGGCAAATATGTCGTGAGGCA...TAACGAGGAGCTTAGGAGAGTCTTGGAGGCGTTCATATATTTTGGGCACCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR TCA 72 bp AACAAAAGTTTCTGCCACTGCATTGAGGATGGGTTTTaGAAGAATCAGTTCTCTACTGCAGTACTCCATGAC +
Preference number: 3 (lower is better)
Translates to: NKSFCHCIEDGF*KNQFSTAVLHD
Trigger: GTCATGGAGTACTGCAGTAGAGAACTGATTCTTTCAAAACCCATCCTCAATGCAGTGGCAGAAACTTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
3UTR GCA 72 bp ACTCTCCTAAGCTCCTCGTTAGTGAAATGTGGGACATaGCTCACGACATATTTGCCCAATTTTATAATCAGA +
Preference number: 3 (lower is better)
Translates to: TLLSSSLVKCGT*LTTYLPNFIIR
Trigger: TCTGATTATAAAATTGGGCAAATATGTCGTGAGGCATGTCCCACATTTCACTAACGAGGAGCTTAGGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CCA 90 bp CTCCATGACCCTGCAGACAACTTCAGGATCCAACGTGAGGCACACCGCAGCTACCTCGTTAGTGAAATGTaGGACATGCCTCACGACATA +
Preference number: 4 (lower is better)
Translates to: LHDPADNFRIQREAHRSYLVSEM*DMPHDI
Trigger: TATGTCGTGAGGCATGTCCCACATTTCACTAACGAG...GTAGCTGCGGTGTGCCTCACGTTGGATCCTGAAGTTGTCTGCAGGGTCATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp ACCCTGCAGACAACTTCAGGATCCAACGTGAGGCACACCGCAGCTACACGATGCCTCAATGTGTCCAAATaGGATTCTTTACCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: TLQTTSGSNVRHTAATRCLNVSK*DSLPCS
Trigger: GCTGCAAGGTAAAGAATCTCATTTGGACACATTGAG...GCATCGTGTAGCTGCGGTGTGCCTCACGTTGGATCCTGAAGTTGTCTGCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTGGCAATCACTCCGGGTaGTCGCGGAAGCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIGNHSG*SRKRLG
Trigger: GCCCAGGCGCTTCCGCGACCACCCGGAGTGATTGCC...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp GCAGTACTCCATGACCCTGCAGACAACTTCAGGATCCAACGTGAGGCACACCGCATTGAGGATGGGTTTTaGAAGAATCAGTTCTCTACT +
Preference number: 4 (lower is better)
Translates to: AVLHDPADNFRIQREAHRIEDGF*KNQFST
Trigger: AGTAGAGAACTGATTCTTTCAAAACCCATCCTCAAT...GCGGTGTGCCTCACGTTGGATCCTGAAGTTGTCTGCAGGGTCATGGAGTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCCTTCAGGATCCAACGTaGGGCACACCGCAGCTACAC +
Preference number: 4 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSLQDPT*GTPQLH
Trigger: GTGTAGCTGCGGTGTGCCTCACGTTGGATCCTGAAG...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CCA 90 bp ACCCTGCAGACAACTTCAGGATCCAACGTGAGGCACACCGCAGCTACACGATGCAGTGCTATCCTTTTATaGATATCTTCATTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TLQTTSGSNVRHTAATRCSAILL*ISSLAV
Trigger: CACAGCTAATGAAGATATCCATAAAAGGATAGCACT...GCATCGTGTAGCTGCGGTGTGCCTCACGTTGGATCCTGAAGTTGTCTGCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp TTCAGTACATGCCTGCAAGATTCTATAAAGGGCCACAATATCCTCCGGGGTAAAGGTGCCCAAAATATATaGACGCCTCCAAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: FSTCLQDSIKGHNILRGKGAQNI*TPPRLS
Trigger: GGAGAGTCTTGGAGGCGTTCATATATTTTGGGCACC...TTTACCCCGGAGGATATTGTGGCCCTTTATAGAATCTTGCAGGCATGTACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp CTCGTTAGTGAAATGTGGGACATGCCTCACGACATATTTGCCCAATTTTATAATCTTCAGGATCCAACGTaGGGCACACCGCAGCTACAC +
Preference number: 4 (lower is better)
Translates to: LVSEMWDMPHDIFAQFYNLQDPT*GTPQLH
Trigger: GTGTAGCTGCGGTGTGCCTCACGTTGGATCCTGAAG...ATTATAAAATTGGGCAAATATGTCGTGAGGCATGTCCCACATTTCACTAACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp TTGAGGATGGGTTTTGAAAGAATCAGTTCTCTACTGCAGTACTCCATGACCCTGTACTGCAGTACTCCATaGCCCTGCAGACAACTTCAG +
Preference number: 4 (lower is better)
Translates to: LRMGFERISSLLQYSMTLYCSTP*PCRQLQ
Trigger: CTGAAGTTGTCTGCAGGGTCATGGAGTACTGCAGTA...CAGGGTCATGGAGTACTGCAGTAGAGAACTGATTCTTTCAAAACCCATCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp ATTCCAGGACTGAGGCTAAGAAAAGTTGGGTCAGTTGTGCCCGACTCAATGTGTTTACCTTGCAGCCGTTaGAGGAAAAGAGGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: IPGLRLRKVGSVVPDSMCLPCSR*RKRGLN
Trigger: ATTCAAGCCTCTTTTCCTTCAACGGCTGCAAGGTAA...ACACATTGAGTCGGGCACAACTGACCCAACTTTTCTTAGCCTCAGTCCTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR GCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTACGAGTATCGCGCTCTaGCGGGCAATCACTCCGGGT +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHITSIAL*RAITPG
Trigger: ACCCGGAGTGATTGCCCGGCAGAGCGCGATACTCGT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CCA 90 bp CCACTTTTTCAGTACATGCCTGCAAGATTCTATAAAGGGCCACAATATCCTCCGGAGGCTAAGAAAAGTTaGGTCAGTTGTGCCCGACTC +
Preference number: 4 (lower is better)
Translates to: PLFQYMPARFYKGPQYPPEAKKS*VSCARL
Trigger: GAGTCGGGCACAACTGACCCAACTTTTCTTAGCCTC...CGGAGGATATTGTGGCCCTTTATAGAATCTTGCAGGCATGTACTGAAAAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCGGGCATGATGGAATTTaGCCCCGAAAGGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSGHDGI*PRKAQV
Trigger: AACCTGAGCCTTTCGGGGTCAAATTCCATCATGCCC...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR TCA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTCGCAGTCAGATACTTaGGAGAACACTGGTCCACCG +
Preference number: 4 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSSQSDT*ENTGPP
Trigger: CGGTGGACCAGTGTTCTCTCAAGTATCTGACTGCGA...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCTTCAGGATCCAACGTaGGGCACACCGCAGCTACAC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHILQDPT*GTPQLH
Trigger: GTGTAGCTGCGGTGTGCCTCACGTTGGATCCTGAAG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR GCA 90 bp CCACTTTTTCAGTACATGCCTGCAAGATTCTATAAAGGGCCACAATATCCTCCGGTGAAATGTGGGACATaGCTCACGACATATTTGCCC +
Preference number: 4 (lower is better)
Translates to: PLFQYMPARFYKGPQYPPVKCGT*LTTYLP
Trigger: GGGCAAATATGTCGTGAGGCATGTCCCACATTTCAC...CGGAGGATATTGTGGCCCTTTATAGAATCTTGCAGGCATGTACTGAAAAAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR GCA 90 bp TCATGGTGCCCAAAATATATGAACGCCTCCAAGACTCTCCTAAGCTCCTCGTTAGCAAACAAAAGTTTCTaGCACTGCATTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SWCPKYMNASKTLLSSSLANKSF*HCIEDG
Trigger: CCCATCCTCAATGCAGTGGCAGAAACTTTTGTTTGC...TAACGAGGAGCTTAGGAGAGTCTTGGAGGCGTTCATATATTTTGGGCACCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTAGGCTCAGGTTGTCGTaGACACAACCAAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIRLRLS*TQPRAQ
Trigger: CTGTGCCCTTGGTTGTGTTCACGACAACCTGAGCCT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp CCTTTTTGGACCATCAATACACAGTGCTATCCTTTTATGGATATCTTCATTAGCAGGCTCAGGTTGTCGTaGACACAACCAAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: PFWTINTQCYPFMDIFISRLRLS*TQPRAQ
Trigger: CTGTGCCCTTGGTTGTGTTCACGACAACCTGAGCCT...GCTAATGAAGATATCCATAAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR TCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTACTGCAGTACTCCATaGCCCTGCAGACAACTTCAG +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPYCSTP*PCRQLQ
Trigger: CTGAAGTTGTCTGCAGGGTCATGGAGTACTGCAGTA...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CCA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCGAGGCTAAGAAAAGTTaGGTCAGTTGTGCCCGACTC +
Preference number: 4 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSEAKKS*VSCARL
Trigger: GAGTCGGGCACAACTGACCCAACTTTTCTTAGCCTC...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CCA 90 bp TCATGGTGCCCAAAATATATGAACGCCTCCAAGACTCTCCTAAGCTCCTCGTTAGGAGCAAAACCTTTTTaGACCATCAATACACAGTGC +
Preference number: 4 (lower is better)
Translates to: SWCPKYMNASKTLLSSSLGAKPF*TINTQC
Trigger: GCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCC...TAACGAGGAGCTTAGGAGAGTCTTGGAGGCGTTCATATATTTTGGGCACCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTGGGCATGATGGAATTTaGCCCCGAAAGGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIGHDGI*PRKAQV
Trigger: AACCTGAGCCTTTCGGGGTCAAATTCCATCATGCCC...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCGGTCCACCGAGTGGATaGAGGTCATTTCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSGPPSG*RSFPFF
Trigger: GAAAAATGGAAATGACCTTCATCCACTCGGTGGACC...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTCGCAGTCAGATACTTaGGAGAACACTGGTCCACCG +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHISQSDT*ENTGPP
Trigger: CGGTGGACCAGTGTTCTCTCAAGTATCTGACTGCGA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTCCATGCCACCTTTTCTaGGACGATTTTGGCATTCTG +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPPCHLF*DDFGIL
Trigger: CAGAATGCCAAAATCGTCTCAGAAAAGGTGGCATGG...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR TCA 90 bp TTGAGGATGGGTTTTGAAAGAATCAGTTCTCTACTGCAGTACTCCATGACCCTGTTTCTGCCACTGCATTaGGGATGGGTTTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: LRMGFERISSLLQYSMTLFLPLH*GWVLKE
Trigger: TTCTTTCAAAACCCATCCTCAATGCAGTGGCAGAAA...CAGGGTCATGGAGTACTGCAGTAGAGAACTGATTCTTTCAAAACCCATCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR GCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTACGATTTTGGCATTCTaGCACCAGGTTCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPTILAF*HQVQQQ
Trigger: CTGTTGCTGAACCTGGTGGCAGAATGCCAAAATCGT...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR GCA 90 bp AAAATATATGAACGCCTCCAAGACTCTCCTAAGCTCCTCGTTAGTGAAATGTGGACCGCAGCTACACGATaGTCTAGGGCTTTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: KIYERLQDSPKLLVSEMWTAATR*SRAFVK
Trigger: TTTTACAAAAGCCCTAGAGCATCGTGTAGCTGCGGT...CCACATTTCACTAACGAGGAGCTTAGGAGAGTCTTGGAGGCGTTCATATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR GCA 90 bp CTCCTAAGCTCCTCGTTAGTGAAATGTGGGACATGCCTCACGACATATTTGCCCACCATCAATACACAGTaGTATCCTTTTATGGATATC +
Preference number: 4 (lower is better)
Translates to: LLSSSLVKCGTCLTTYLPTINTQ*YPFMDI
Trigger: GATATCCATAAAAGGATAGCACTGTGTATTGATGGT...GGGCAAATATGTCGTGAGGCATGTCCCACATTTCACTAACGAGGAGCTTAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR GCA 90 bp TCATGGTGCCCAAAATATATGAACGCCTCCAAGACTCTCCTAAGCTCCTCGTTATCCCCAGTAAGTGTTTaGTATTGGAGCAAAACCTTT +
Preference number: 4 (lower is better)
Translates to: SWCPKYMNASKTLLSSSLSPVSV*YWSKTF
Trigger: AAAGGTTTTGCTCCAATAGCAAACACTTACTGGGGA...TAACGAGGAGCTTAGGAGAGTCTTGGAGGCGTTCATATATTTTGGGCACCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTCACTGGTCCACCGAGTaGATGAAGGTCATTTCCATT +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPHWSTE*MKVISI
Trigger: AATGGAAATGACCTTCATCCACTCGGTGGACCAGTG...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR CCA 90 bp TTGAGGATGGGTTTTGAAAGAATCAGTTCTCTACTGCAGTACTCCATGACCCTGAGCAGAGGCATTTGGTaGCAAATAATTGAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LRMGFERISSLLQYSMTLSRGIW*QIIEFP
Trigger: GGGAAACTCAATTATTTGCCACCAAATGCCTCTGCT...CAGGGTCATGGAGTACTGCAGTAGAGAACTGATTCTTTCAAAACCCATCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CCA 90 bp GCCACTGCATTGAGGATGGGTTTTGAAAGAATCAGTTCTCTACTGCAGTACTCCTTTAGGAAGGAGTTTTaGACCCTTATAGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: ATALRMGFERISSLLQYSFRKEF*TLIERA
Trigger: TGCCCTTTCTATAAGGGTCCAAAACTCCTTCCTAAA...GGAGTACTGCAGTAGAGAACTGATTCTTTCAAAACCCATCCTCAATGCAGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTGGCACAGACGCTCCTTaGCTACCTTGTGAACATGAT +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIGTDAP*LPCEHD
Trigger: ATCATGTTCACAAGGTAGTCAAGGAGCGTCTGTGCC...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp CCTTTTTGGACCATCAATACACAGTGCTATCCTTTTATGGATATCTTCATTAGCGGCACAGACGCTCCTTaGCTACCTTGTGAACATGAT +
Preference number: 4 (lower is better)
Translates to: PFWTINTQCYPFMDIFISGTDAP*LPCEHD
Trigger: ATCATGTTCACAAGGTAGTCAAGGAGCGTCTGTGCC...GCTAATGAAGATATCCATAAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTGGTGCCCAAAATATATaGACGCCTCCAAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIGAQNI*TPPRLS
Trigger: GGAGAGTCTTGGAGGCGTTCATATATTTTGGGCACC...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp CCTTTTTGGACCATCAATACACAGTGCTATCCTTTTATGGATATCTTCATTAGCGGTGCCCAAAATATATaGACGCCTCCAAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: PFWTINTQCYPFMDIFISGAQNI*TPPRLS
Trigger: GGAGAGTCTTGGAGGCGTTCATATATTTTGGGCACC...GCTAATGAAGATATCCATAAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTACTGCAGTACTCCATaGCCCTGCAGACAACTTCAG +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIYCSTP*PCRQLQ
Trigger: CTGAAGTTGTCTGCAGGGTCATGGAGTACTGCAGTA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp GCCACTGCATTGAGGATGGGTTTTGAAAGAATCAGTTCTCTACTGCAGTACTCCAGAAATCTGACGAGGTaGAAATTTTTCTGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: ATALRMGFERISSLLQYSRNLTR*KFFCLA
Trigger: TGCCAAACAGAAAAATTTTCACCTCGTCAGATTTCT...GGAGTACTGCAGTAGAGAACTGATTCTTTCAAAACCCATCCTCAATGCAGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTACCTTGCAGCCGTTaGAGGAAAAGAGGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPLPCSR*RKRGLN
Trigger: ATTCAAGCCTCTTTTCCTTCAACGGCTGCAAGGTAA...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR GCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTACCGCAGCTACACGATaGTCTAGGGCTTTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPTAATR*SRAFVK
Trigger: TTTTACAAAAGCCCTAGAGCATCGTGTAGCTGCGGT...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR GCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTGCAAACAAAAGTTTCTaGCACTGCATTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPANKSF*HCIEDG
Trigger: CCCATCCTCAATGCAGTGGCAGAAACTTTTGTTTGC...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTCTCCAGTATTTCTTTTaGCAGCCCTTGATCACCATC +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPLQYFF*QPLITI
Trigger: GATGGTGATCAAGGGCTGCCAAAAGAAATACTGGAG...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR CCA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTCTGAGACGATTTTaGCATTCTGCCACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSFLRRF*HSATRF
Trigger: GAACCTGGTGGCAGAATGCCAAAATCGTCTCAGAAA...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR CCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTGAGGCTAAGAAAAGTTaGGTCAGTTGTGCCCGACTC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIEAKKS*VSCARL
Trigger: GAGTCGGGCACAACTGACCCAACTTTTCTTAGCCTC...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
3UTR CAA 72 bp TTGACTTTGATCAAGAACCACCAGGGCAGTGAGCATTaGGCTAATCAATTTAGGACTCAGGTTGGAAACTAT +
Preference number: 4 (lower is better)
Translates to: LTLIKNHQGSEH*ANQFRTQVGNY
Trigger: ATAGTTTCCAACCTGAGTCCTAAATTGATTAGCCAAATGCTCACTGCCCTGGTGGTTCTTGATCAAAGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp CTCGTTAGTGAAATGTGGGACATGCCTCACGACATATTTGCCCAATTTTATAATGGTTCTTCCTCAAGGTaGTTAATGCCATACCATCAG +
Preference number: 4 (lower is better)
Translates to: LVSEMWDMPHDIFAQFYNGSSSR*LMPYHQ
Trigger: CTGATGGTATGGCATTAATCACCTTGAGGAAGAACC...ATTATAAAATTGGGCAAATATGTCGTGAGGCATGTCCCACATTTCACTAACGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTGGTCCACCGAGTGGATaGAGGTCATTTCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIGPPSG*RSFPFF
Trigger: GAAAAATGGAAATGACCTTCATCCACTCGGTGGACC...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCCATGCCACCTTTTCTaGGACGATTTTGGCATTCTG +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIPCHLF*DDFGIL
Trigger: CAGAATGCCAAAATCGTCTCAGAAAAGGTGGCATGG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTCTGCCACTGCATTaGGGATGGGTTTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSFLPLH*GWVLKE
Trigger: TTCTTTCAAAACCCATCCTCAATGCAGTGGCAGAAA...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR TCA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTCCTTCCACCTTGCATTaGTCAATTGGACTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFPSTLH*SIGLKA
Trigger: AGCCTTCAGTCCAATTGATCAATGCAAGGTGGAAGG...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR GCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTACGATTTTGGCATTCTaGCACCAGGTTCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHITILAF*HQVQQQ
Trigger: CTGTTGCTGAACCTGGTGGCAGAATGCCAAAATCGT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR GCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTGTGAAATGTGGGACATaGCTCACGACATATTTGCCC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIVKCGT*LTTYLP
Trigger: GGGCAAATATGTCGTGAGGCATGTCCCACATTTCAC...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR GCA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTGTGAAATGTGGGACATaGCTCACGACATATTTGCCC +
Preference number: 4 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFVKCGT*LTTYLP
Trigger: GGGCAAATATGTCGTGAGGCATGTCCCACATTTCAC...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR GCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTAAGTTGGGTCAGTTGTaGCCGACTCAATGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIKLGQL*PTQCVQ
Trigger: TTGGACACATTGAGTCGGGCACAACTGACCCAACTT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR GCA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTAAGTTGGGTCAGTTGTaGCCGACTCAATGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFKLGQL*PTQCVQ
Trigger: TTGGACACATTGAGTCGGGCACAACTGACCCAACTT...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR GCA 90 bp TTAGTGAAATGTGGGACATGCCTCACGACATATTTGCCCAATTTTATAATCAGAAAGTTGGGTCAGTTGTaGCCGACTCAATGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LVKCGTCLTTYLPNFIIRKLGQL*PTQCVQ
Trigger: TTGGACACATTGAGTCGGGCACAACTGACCCAACTT...TCTGATTATAAAATTGGGCAAATATGTCGTGAGGCATGTCCCACATTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCACTGGTCCACCGAGTaGATGAAGGTCATTTCCATT +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIHWSTE*MKVISI
Trigger: AATGGAAATGACCTTCATCCACTCGGTGGACCAGTG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTAGGGCAGTGAGCATTTaGCTAATCAATTTAGGACTC +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPRAVSI*LINLGL
Trigger: GAGTCCTAAATTGATTAGCCAAATGCTCACTGCCCT...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTGGAGCAAAACCTTTTTaGACCATCAATACACAGTGC +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPGAKPF*TINTQC
Trigger: GCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCC...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTGGTTCTTCCTCAAGGTaGTTAATGCCATACCATCAG +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIGSSSR*LMPYHQ
Trigger: CTGATGGTATGGCATTAATCACCTTGAGGAAGAACC...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp CCTTTTTGGACCATCAATACACAGTGCTATCCTTTTATGGATATCTTCATTAGCGGTTCTTCCTCAAGGTaGTTAATGCCATACCATCAG +
Preference number: 4 (lower is better)
Translates to: PFWTINTQCYPFMDIFISGSSSR*LMPYHQ
Trigger: CTGATGGTATGGCATTAATCACCTTGAGGAAGAACC...GCTAATGAAGATATCCATAAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR TCA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTTACAATGGGCATaGTGGAATTTGACCCCGAAA +
Preference number: 4 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSFLQWA*WNLTPK
Trigger: TTTCGGGGTCAAATTCCATCATGCCCATTGTAAAAA...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR TCA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTGGTGGCAAATAATTaGGTTTCCCAAATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSLVANN*VSQMVP
Trigger: TGGAACCATTTGGGAAACTCAATTATTTGCCACCAA...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTTACCTTGCAGCCGTTaGAGGAAAAGAGGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHILPCSR*RKRGLN
Trigger: ATTCAAGCCTCTTTTCCTTCAACGGCTGCAAGGTAA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp AAAATATATGAACGCCTCCAAGACTCTCCTAAGCTCCTCGTTAGTGAAATGTGGAGTTCTTCCATTGTTTaGGTTCTGAAGTCAGTATTC +
Preference number: 4 (lower is better)
Translates to: KIYERLQDSPKLLVSEMWSSSIV*VLKSVF
Trigger: GAATACTGACTTCAGAACTCAAACAATGGAAGAACT...CCACATTTCACTAACGAGGAGCTTAGGAGAGTCTTGGAGGCGTTCATATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTGAAAAATTCCTCGTGTaGTACCCTCACAAACACTAT +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPEKFLV*YPHKHY
Trigger: ATAGTGTTTGTGAGGGTATCACACGAGGAATTTTTC...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR GCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTCTGATGAAGTCAAGTTaGTCAGTCTCCTGTAAAACA +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPLMKSS*SVSCKT
Trigger: TGTTTTACAGGAGACTGAGCAACTTGACTTCATCAG...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR GCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTACCGCAGCTACACGATaGTCTAGGGCTTTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHITAATR*SRAFVK
Trigger: TTTTACAAAAGCCCTAGAGCATCGTGTAGCTGCGGT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR GCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTGCAAACAAAAGTTTCTaGCACTGCATTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIANKSF*HCIEDG
Trigger: CCCATCCTCAATGCAGTGGCAGAAACTTTTGTTTGC...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCTCCAGTATTTCTTTTaGCAGCCCTTGATCACCATC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHILQYFF*QPLITI
Trigger: GATGGTGATCAAGGGCTGCCAAAAGAAATACTGGAG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTTTCTGAGACGATTTTaGCATTCTGCCACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIFLRRF*HSATRF
Trigger: GAACCTGGTGGCAGAATGCCAAAATCGTCTCAGAAA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCTCGTTAGTGAAATGTaGGACATGCCTCACGACATA +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHILVSEM*DMPHDI
Trigger: TATGTCGTGAGGCATGTCCCACATTTCACTAACGAG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CCA 90 bp CCTTTTTGGACCATCAATACACAGTGCTATCCTTTTATGGATATCTTCATTAGCCTCGTTAGTGAAATGTaGGACATGCCTCACGACATA +
Preference number: 4 (lower is better)
Translates to: PFWTINTQCYPFMDIFISLVSEM*DMPHDI
Trigger: TATGTCGTGAGGCATGTCCCACATTTCACTAACGAG...GCTAATGAAGATATCCATAAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR TCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTATTGAGGATGGGTTTTaGAAGAATCAGTTCTCTACT +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPIEDGF*KNQFST
Trigger: AGTAGAGAACTGATTCTTTCAAAACCCATCCTCAAT...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTTTCTGCCACTGCATTaGGGATGGGTTTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIFLPLH*GWVLKE
Trigger: TTCTTTCAAAACCCATCCTCAATGCAGTGGCAGAAA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTAGAAATCTGACGAGGTaGAAATTTTTCTGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPRNLTR*KFFCLA
Trigger: TGCCAAACAGAAAAATTTTCACCTCGTCAGATTTCT...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCTCAATGTGTCCAAATaGGATTCTTTACCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHILNVSK*DSLPCS
Trigger: GCTGCAAGGTAAAGAATCTCATTTGGACACATTGAG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp CCTTTTTGGACCATCAATACACAGTGCTATCCTTTTATGGATATCTTCATTAGCCTCAATGTGTCCAAATaGGATTCTTTACCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PFWTINTQCYPFMDIFISLNVSK*DSLPCS
Trigger: GCTGCAAGGTAAAGAATCTCATTTGGACACATTGAG...GCTAATGAAGATATCCATAAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTAGGGCAGTGAGCATTTaGCTAATCAATTTAGGACTC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIRAVSI*LINLGL
Trigger: GAGTCCTAAATTGATTAGCCAAATGCTCACTGCCCT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTAGCAGAGGCATTTGGTaGCAAATAATTGAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHISRGIW*QIIEFP
Trigger: GGGAAACTCAATTATTTGCCACCAAATGCCTCTGCT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CCA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTAGCAGAGGCATTTGGTaGCAAATAATTGAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFSRGIW*QIIEFP
Trigger: GGGAAACTCAATTATTTGCCACCAAATGCCTCTGCT...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTGGAGCAAAACCTTTTTaGACCATCAATACACAGTGC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIGAKPF*TINTQC
Trigger: GCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCC...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTTTTTACAATGGGCATaGTGGAATTTGACCCCGAAA +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIFLQWA*WNLTPK
Trigger: TTTCGGGGTCAAATTCCATCATGCCCATTGTAAAAA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTTGGTGGCAAATAATTaGGTTTCCCAAATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHILVANN*VSQMVP
Trigger: TGGAACCATTTGGGAAACTCAATTATTTGCCACCAA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp TTAGTGAAATGTGGGACATGCCTCACGACATATTTGCCCAATTTTATAATCAGATTGGTGGCAAATAATTaGGTTTCCCAAATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LVKCGTCLTTYLPNFIIRLVANN*VSQMVP
Trigger: TGGAACCATTTGGGAAACTCAATTATTTGCCACCAA...TCTGATTATAAAATTGGGCAAATATGTCGTGAGGCATGTCCCACATTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR TCA 90 bp CTCGTTAGTGAAATGTGGGACATGCCTCACGACATATTTGCCCAATTTTATAATCCATTGTTTGAGTTCTaGAGTCAGTATTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: LVSEMWDMPHDIFAQFYNPLFEF*SQYSFL
Trigger: CAAGAATGAATACTGACTTCAGAACTCAAACAATGG...ATTATAAAATTGGGCAAATATGTCGTGAGGCATGTCCCACATTTCACTAACGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR GCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCTGATGAAGTCAAGTTaGTCAGTCTCCTGTAAAACA +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHILMKSS*SVSCKT
Trigger: TGTTTTACAGGAGACTGAGCAACTTGACTTCATCAG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR GCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCAAGAATACAAAGATTaGGAACTTCCATGCCACCTT +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIQEYKD*ELPCHL
Trigger: AAGGTGGCATGGAAGTTCGCAATCTTTGTATTCTTG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR GCA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTCAAGAATACAAAGATTaGGAACTTCCATGCCACCTT +
Preference number: 4 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFQEYKD*ELPCHL
Trigger: AAGGTGGCATGGAAGTTCGCAATCTTTGTATTCTTG...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR GCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTCCCCAGTAAGTGTTTaGTATTGGAGCAAAACCTTT +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHISPVSV*YWSKTF
Trigger: AAAGGTTTTGCTCCAATAGCAAACACTTACTGGGGA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR GCA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTTCCCCAGTAAGTGTTTaGTATTGGAGCAAAACCTTT +
Preference number: 4 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFSPVSV*YWSKTF
Trigger: AAAGGTTTTGCTCCAATAGCAAACACTTACTGGGGA...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CCA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCAGAAAGTTGACTGGATaGCATTCATTAAGTGAACAT +
Preference number: 4 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSRKLTG*HSLSEH
Trigger: ATGTTCACTTAATGAATGCCATCCAGTCAACTTTCT...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTTTAGGAAGGAGTTTTaGACCCTTATAGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIFRKEF*TLIERA
Trigger: TGCCCTTTCTATAAGGGTCCAAAACTCCTTCCTAAA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CCA 90 bp CCTTTTTGGACCATCAATACACAGTGCTATCCTTTTATGGATATCTTCATTAGCTTTAGGAAGGAGTTTTaGACCCTTATAGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PFWTINTQCYPFMDIFISFRKEF*TLIERA
Trigger: TGCCCTTTCTATAAGGGTCCAAAACTCCTTCCTAAA...GCTAATGAAGATATCCATAAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CCA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTAGTGCTATCCTTTTATaGATATCTTCATTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPSAILL*ISSLAV
Trigger: CACAGCTAATGAAGATATCCATAAAAGGATAGCACT...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTATTGAGGATGGGTTTTaGAAGAATCAGTTCTCTACT +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIIEDGF*KNQFST
Trigger: AGTAGAGAACTGATTCTTTCAAAACCCATCCTCAAT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTAGAAATCTGACGAGGTaGAAATTTTTCTGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIRNLTR*KFFCLA
Trigger: TGCCAAACAGAAAAATTTTCACCTCGTCAGATTTCT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCCATTGTTTGAGTTCTaGAGTCAGTATTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIPLFEF*SQYSFL
Trigger: CAAGAATGAATACTGACTTCAGAACTCAAACAATGG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR TCA 90 bp CCTTTTTGGACCATCAATACACAGTGCTATCCTTTTATGGATATCTTCATTAGCCCATTGTTTGAGTTCTaGAGTCAGTATTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: PFWTINTQCYPFMDIFISPLFEF*SQYSFL
Trigger: CAAGAATGAATACTGACTTCAGAACTCAAACAATGG...GCTAATGAAGATATCCATAAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR TCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTAGTTCTTCCATTGTTTaGGTTCTGAAGTCAGTATTC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHISSSIV*VLKSVF
Trigger: GAATACTGACTTCAGAACTCAAACAATGGAAGAACT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CCA 90 bp CTCGTTAGTGAAATGTGGGACATGCCTCACGACATATTTGCCCAATTTTATAATAGAAAGTTGACTGGATaGCATTCATTAAGTGAACAT +
Preference number: 4 (lower is better)
Translates to: LVSEMWDMPHDIFAQFYNRKLTG*HSLSEH
Trigger: ATGTTCACTTAATGAATGCCATCCAGTCAACTTTCT...ATTATAAAATTGGGCAAATATGTCGTGAGGCATGTCCCACATTTCACTAACGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR GCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCACTTTTTCAGTACATaGCTGCAAGATTCTATAAAG +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIHFFST*LQDSIK
Trigger: CTTTATAGAATCTTGCAGGCATGTACTGAAAAAGTG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR GCA 90 bp CCTTTTTGGACCATCAATACACAGTGCTATCCTTTTATGGATATCTTCATTAGCCACTTTTTCAGTACATaGCTGCAAGATTCTATAAAG +
Preference number: 4 (lower is better)
Translates to: PFWTINTQCYPFMDIFISHFFST*LQDSIK
Trigger: CTTTATAGAATCTTGCAGGCATGTACTGAAAAAGTG...GCTAATGAAGATATCCATAAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR GCA 90 bp TTAGTGAAATGTGGGACATGCCTCACGACATATTTGCCCAATTTTATAATCAGACACTTTTTCAGTACATaGCTGCAAGATTCTATAAAG +
Preference number: 4 (lower is better)
Translates to: LVKCGTCLTTYLPNFIIRHFFST*LQDSIK
Trigger: CTTTATAGAATCTTGCAGGCATGTACTGAAAAAGTG...TCTGATTATAAAATTGGGCAAATATGTCGTGAGGCATGTCCCACATTTCACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR GCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTACCATCAATACACAGTaGTATCCTTTTATGGATATC +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHITINTQ*YPFMDI
Trigger: GATATCCATAAAAGGATAGCACTGTGTATTGATGGT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR GCA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTACCATCAATACACAGTaGTATCCTTTTATGGATATC +
Preference number: 4 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFTINTQ*YPFMDI
Trigger: GATATCCATAAAAGGATAGCACTGTGTATTGATGGT...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTAGAAAGTTGACTGGATaGCATTCATTAAGTGAACAT +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIRKLTG*HSLSEH
Trigger: ATGTTCACTTAATGAATGCCATCCAGTCAACTTTCT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CCA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTAGTGCTATCCTTTTATaGATATCTTCATTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHISAILL*ISSLAV
Trigger: CACAGCTAATGAAGATATCCATAAAAGGATAGCACT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
3UTR CAA 72 bp GCAGTGAGCATTTGGCTAATCAATTTAGGACTCAGGTaGGAAACTATTGATAGGGAAAAGTTGTTTATCTTA +
Preference number: 4 (lower is better)
Translates to: AVSIWLINLGLR*ETIDREKLFIL
Trigger: TAAGATAAACAACTTTTCCCTATCAATAGTTTCCAACCTGAGTCCTAAATTGATTAGCCAAATGCTCACTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS TCA 90 bp ACAATGGGCATGATGGAATTTGACCCCGAAAGGCTCAGGTTGTCGTaGACACAACCAAGGGCACAGACGCTCCTTGACTACCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: TMGMMEFDPERLRLS*TQPRAQTLLDYLVN
Trigger: GTTCACAAGGTAGTCAAGGAGCGTCTGTGCCCTTGGTTGTGTTCACGACAACCTGAGCCTTTCGGGGTCAAATTCCATCATGCCCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264669.10
ENST00000504695.1
ENST00000507036.1
ENST00000507572.1
CDS-3UTR CAA 90 bp ACCCTGCAGACAACTTCAGGATCCAACGTGAGGCACACCGCAGCTACACGATGCCCACCAATTCACGTCTaGATTTTAGCATCCCAATCT +
Preference number: 5 (lower is better)
Translates to: TLQTTSGSNVRHTAATRCPPIHV*ILASQS
Trigger: AGATTGGGATGCTAAAATCAAGACGTGAATTGGTGG...GCATCGTGTAGCTGCGGTGTGCCTCACGTTGGATCCTGAAGTTGTCTGCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CAA 90 bp TCAGGATCCAACGTGAGGCACACCGCAGCTACACGATGCTCTAGGGCTTTTGTAGTTTCTGCCACTGCATaGAGGATGGGTTTTGAAAGA +
Preference number: 5 (lower is better)
Translates to: SGSNVRHTAATRCSRAFVVSATA*RMGFER
Trigger: TCTTTCAAAACCCATCCTCAATGCAGTGGCAGAAAC...TACAAAAGCCCTAGAGCATCGTGTAGCTGCGGTGTGCCTCACGTTGGATCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CAA 90 bp CTCCATGACCCTGCAGACAACTTCAGGATCCAACGTGAGGCACACCGCAGCTACTGCCTCACGACATATTaGCCCAATTTTATAATCAGA +
Preference number: 5 (lower is better)
Translates to: LHDPADNFRIQREAHRSYCLTTY*PNFIIR
Trigger: TCTGATTATAAAATTGGGCAAATATGTCGTGAGGCA...GTAGCTGCGGTGTGCCTCACGTTGGATCCTGAAGTTGTCTGCAGGGTCATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CAA 90 bp TCAGGATCCAACGTGAGGCACACCGCAGCTACACGATGCTCTAGGGCTTTTGTAAGTCAGTATTCATTCTaGCAACCAATGAACAGTGTT +
Preference number: 5 (lower is better)
Translates to: SGSNVRHTAATRCSRAFVSQYSF*QPMNSV
Trigger: AACACTGTTCATTGGTTGCAAGAATGAATACTGACT...TACAAAAGCCCTAGAGCATCGTGTAGCTGCGGTGTGCCTCACGTTGGATCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CAA 90 bp AAAATATATGAACGCCTCCAAGACTCTCCTAAGCTCCTCGTTAGTGAAATGTGGGAAAAGTTGGGTCAGTaGTGCCCGACTCAATGTGTC +
Preference number: 5 (lower is better)
Translates to: KIYERLQDSPKLLVSEMWEKLGQ*CPTQCV
Trigger: GACACATTGAGTCGGGCACAACTGACCCAACTTTTC...CCACATTTCACTAACGAGGAGCTTAGGAGAGTCTTGGAGGCGTTCATATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CAA 90 bp ATCAAGAACCACCAGGGCAGTGAGCATTTGGCTAATCAATTTAGGACTCAGGTTCAGGGCAGTGAGCATTaGGCTAATCAATTTAGGACT +
Preference number: 5 (lower is better)
Translates to: IKNHQGSEHLANQFRTQVQGSEH*ANQFRT
Trigger: AGTCCTAAATTGATTAGCCAAATGCTCACTGCCCTG...AACCTGAGTCCTAAATTGATTAGCCAAATGCTCACTGCCCTGGTGGTTCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CAA 90 bp ATTCCAGGACTGAGGCTAAGAAAAGTTGGGTCAGTTGTGCCCGACTCAATGTGTAATCAGAGGAAATGCTaGACTTTGATCAAGAACCAC +
Preference number: 5 (lower is better)
Translates to: IPGLRLRKVGSVVPDSMCNQRKC*TLIKNH
Trigger: GTGGTTCTTGATCAAAGTCAAGCATTTCCTCTGATT...ACACATTGAGTCGGGCACAACTGACCCAACTTTTCTTAGCCTCAGTCCTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CAA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCGAAAAGTTGGGTCAGTaGTGCCCGACTCAATGTGTC +
Preference number: 5 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSEKLGQ*CPTQCV
Trigger: GACACATTGAGTCGGGCACAACTGACCCAACTTTTC...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp ATTCCAGGACTGAGGCTAAGAAAAGTTGGGTCAGTTGTGCCCGACTCAATGTGTAATTTAGGACTCAGGTaGGAAACTATTGATAGGGAA +
Preference number: 5 (lower is better)
Translates to: IPGLRLRKVGSVVPDSMCNLGLR*ETIDRE
Trigger: TTCCCTATCAATAGTTTCCAACCTGAGTCCTAAATT...ACACATTGAGTCGGGCACAACTGACCCAACTTTTCTTAGCCTCAGTCCTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CAA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTAGGAAATGCTTGACTTaGATCAAGAACCACCAGGGC +
Preference number: 5 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPRKCLT*IKNHQG
Trigger: GCCCTGGTGGTTCTTGATCAAAGTCAAGCATTTCCT...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCAGGAAATGCTTGACTTaGATCAAGAACCACCAGGGC +
Preference number: 5 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSRKCLT*IKNHQG
Trigger: GCCCTGGTGGTTCTTGATCAAAGTCAAGCATTTCCT...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp ATTCCAGGACTGAGGCTAAGAAAAGTTGGGTCAGTTGTGCCCGACTCAATGTGTAGGGTGTCAACACTTTaGGAGCAAAATATAATCTTG +
Preference number: 5 (lower is better)
Translates to: IPGLRLRKVGSVVPDSMCRVSTL*EQNIIL
Trigger: CAAGATTATATTTTGCTCCAAAAGTGTTGACACCCT...ACACATTGAGTCGGGCACAACTGACCCAACTTTTCTTAGCCTCAGTCCTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CAA 90 bp CCACTTTTTCAGTACATGCCTGCAAGATTCTATAAAGGGCCACAATATCCTCCGTGGAGCAAAACCTTTTaGGACCATCAATACACAGTG +
Preference number: 5 (lower is better)
Translates to: PLFQYMPARFYKGPQYPPWSKTF*DHQYTV
Trigger: CACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCA...CGGAGGATATTGTGGCCCTTTATAGAATCTTGCAGGCATGTACTGAAAAAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS CCA 90 bp AAGCCTGTCGCAGTCAGATACTTGAGAGAACACTGGTCCACCGAGTaGATGAAGGTCATTTCCATTTTTCGAATGAAACTTTTTACAATG +
Preference number: 5 (lower is better)
Translates to: KPVAVRYLREHWSTE*MKVISIFRMKLFTM
Trigger: CATTGTAAAAAGTTTCATTCGAAAAATGGAAATGACCTTCATCCACTCGGTGGACCAGTGTTCTCTCAAGTATCTGACTGCGACAGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264669.10
ENST00000504695.1
ENST00000507036.1
ENST00000507572.1
CDS CCA 90 bp AACATTTTGTTCAAGCCTGTCGCAGTCAGATACTTGAGAGAACACTaGTCCACCGAGTGGATGAAGGTCATTTCCATTTTTCGAATGAAA +
Preference number: 5 (lower is better)
Translates to: NILFKPVAVRYLREH*STEWMKVISIFRMK
Trigger: TTTCATTCGAAAAATGGAAATGACCTTCATCCACTCGGTGGACCAGTGTTCTCTCAAGTATCTGACTGCGACAGGCTTGAACAAAATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264669.10
ENST00000504695.1
ENST00000507036.1
ENST00000507572.1
CDS-3UTR CAA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTCTCCAGTATTTCTTTaGGCAGCCCTTGATCACCAT +
Preference number: 5 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPSPVFL*AALDHH
Trigger: ATGGTGATCAAGGGCTGCCAAAAGAAATACTGGAGA...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCAGCAACAGGCTACTTaGAGGATCCACATGCAACAG +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIQQQAT*RIHMQQ
Trigger: CTGTTGCATGTGGATCCTCAAAGTAGCCTGTTGCTG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTCAGCAACAGGCTACTTaGAGGATCCACATGCAACAG +
Preference number: 5 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFQQQAT*RIHMQQ
Trigger: CTGTTGCATGTGGATCCTCAAAGTAGCCTGTTGCTG...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR CAA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTGTTTCTGCCACTGCATaGAGGATGGGTTTTGAAAGA +
Preference number: 5 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPVSATA*RMGFER
Trigger: TCTTTCAAAACCCATCCTCAATGCAGTGGCAGAAAC...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp GTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTACCTTGCAGCCGTaGAAGGAAAAGAGGCTTGAA +
Preference number: 5 (lower is better)
Translates to: VFAIGAKPFWTINTQCYPFTLQP*KEKRLE
Trigger: TTCAAGCCTCTTTTCCTTCAACGGCTGCAAGGTAAA...AGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTGAAAAGTTGGGTCAGTaGTGCCCGACTCAATGTGTC +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIEKLGQ*CPTQCV
Trigger: GACACATTGAGTCGGGCACAACTGACCCAACTTTTC...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTAGGAAATGCTTGACTTaGATCAAGAACCACCAGGGC +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIRKCLT*IKNHQG
Trigger: GCCCTGGTGGTTCTTGATCAAAGTCAAGCATTTCCT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTGGAGCAAAACCTTTTaGGACCATCAATACACAGTG +
Preference number: 5 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSWSKTF*DHQYTV
Trigger: CACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCA...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTCCCCAGTAAGTGTTaGCTATTGGAGCAAAACCTT +
Preference number: 5 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSFPSKC*LLEQNL
Trigger: AAGGTTTTGCTCCAATAGCAAACACTTACTGGGGAA...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCCCACCAATTCACGTCTaGATTTTAGCATCCCAATCT +
Preference number: 5 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSPPIHV*ILASQS
Trigger: AGATTGGGATGCTAAAATCAAGACGTGAATTGGTGG...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp CCTTTTTGGACCATCAATACACAGTGCTATCCTTTTATGGATATCTTCATTAGCTCCTTCCACCTTGCATaGATCAATTGGACTGAAGGC +
Preference number: 5 (lower is better)
Translates to: PFWTINTQCYPFMDIFISSFHLA*INWTEG
Trigger: GCCTTCAGTCCAATTGATCAATGCAAGGTGGAAGGA...GCTAATGAAGATATCCATAAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTCTCCAGTATTTCTTTaGGCAGCCCTTGATCACCAT +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHISPVFL*AALDHH
Trigger: ATGGTGATCAAGGGCTGCCAAAAGAAATACTGGAGA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCCAAGAATACAAAGATaGCGAACTTCCATGCCACCT +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIPRIQR*RTSMPP
Trigger: AGGTGGCATGGAAGTTCGCAATCTTTGTATTCTTGG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCAGGGCAGTGAGCATTaGGCTAATCAATTTAGGACT +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIQGSEH*ANQFRT
Trigger: AGTCCTAAATTGATTAGCCAAATGCTCACTGCCCTG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTCAGGGCAGTGAGCATTaGGCTAATCAATTTAGGACT +
Preference number: 5 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFQGSEH*ANQFRT
Trigger: AGTCCTAAATTGATTAGCCAAATGCTCACTGCCCTG...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTGTTTCTGCCACTGCATaGAGGATGGGTTTTGAAAGA +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIVSATA*RMGFER
Trigger: TCTTTCAAAACCCATCCTCAATGCAGTGGCAGAAAC...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTTTACCTTGCAGCCGTaGAAGGAAAAGAGGCTTGAA +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIFTLQP*KEKRLE
Trigger: TTCAAGCCTCTTTTCCTTCAACGGCTGCAAGGTAAA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTTTTACCTTGCAGCCGTaGAAGGAAAAGAGGCTTGAA +
Preference number: 5 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFFTLQP*KEKRLE
Trigger: TTCAAGCCTCTTTTCCTTCAACGGCTGCAAGGTAAA...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp CAAATGGTTCCATTAAGGCAGAAATCTGACGAGGTGAAAATTTTTCTGTTTGGCATGAGATTCTTTACCTaGCAGCCGTTGAAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: QMVPLRQKSDEVKIFLFGMRFFT*QPLKEK
Trigger: CTTTTCCTTCAACGGCTGCAAGGTAAAGAATCTCAT...GCCAAACAGAAAAATTTTCACCTCGTCAGATTTCTGCCTTAATGGAACCATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CAA 90 bp CAAATGGTTCCATTAAGGCAGAAATCTGACGAGGTGAAAATTTTTCTGTTTGGCTTCCCCAGTAAGTGTTaGCTATTGGAGCAAAACCTT +
Preference number: 5 (lower is better)
Translates to: QMVPLRQKSDEVKIFLFGFPSKC*LLEQNL
Trigger: AAGGTTTTGCTCCAATAGCAAACACTTACTGGGGAA...GCCAAACAGAAAAATTTTCACCTCGTCAGATTTCTGCCTTAATGGAACCATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000511261.5
CDS-3UTR CAA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTGCCTCACGACATATTaGCCCAATTTTATAATCAGA +
Preference number: 5 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSCLTTY*PNFIIR
Trigger: TCTGATTATAAAATTGGGCAAATATGTCGTGAGGCA...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTATGAGATTCTTTACCTaGCAGCCGTTGAAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIMRFFT*QPLKEK
Trigger: CTTTTCCTTCAACGGCTGCAAGGTAAAGAATCTCAT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTATGAGATTCTTTACCTaGCAGCCGTTGAAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFMRFFT*QPLKEK
Trigger: CTTTTCCTTCAACGGCTGCAAGGTAAAGAATCTCAT...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp AGTGTTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCAGGGTGTCAACACTTTaGGAGCAAAATATAATCTTG +
Preference number: 5 (lower is better)
Translates to: SVCYWSKTFLDHQYTVLSRVSTL*EQNIIL
Trigger: CAAGATTATATTTTGCTCCAAAAGTGTTGACACCCT...GGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTGGAGCAAAACCTTTTaGGACCATCAATACACAGTG +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIWSKTF*DHQYTV
Trigger: CACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTTCCCCAGTAAGTGTTaGCTATTGGAGCAAAACCTT +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIFPSKC*LLEQNL
Trigger: AAGGTTTTGCTCCAATAGCAAACACTTACTGGGGAA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTCCACCAATTCACGTCTaGATTTTAGCATCCCAATCT +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIPPIHV*ILASQS
Trigger: AGATTGGGATGCTAAAATCAAGACGTGAATTGGTGG...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTTTCCTTTGCTTTGCTTaGATTCCTTCCACCTTGCAT +
Preference number: 5 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFFLCFA*IPSTLH
Trigger: ATGCAAGGTGGAAGGAATCAAAGCAAAGCAAAGGAA...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000507036.1
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTAATCAGAGGAAATGCTaGACTTTGATCAAGAACCAC +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHINQRKC*TLIKNH
Trigger: GTGGTTCTTGATCAAAGTCAAGCATTTCCTCTGATT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTAATCAGAGGAAATGCTaGACTTTGATCAAGAACCAC +
Preference number: 5 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFNQRKC*TLIKNH
Trigger: GTGGTTCTTGATCAAAGTCAAGCATTTCCTCTGATT...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS TCA 90 bp TTAATTTCAACATCTGGTGAGAGAAGAAAGGAAAAATTCCTCGTGTaGTACCCTCACAAACACTATCTTCCTGTATTCATTCCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: LISTSGERRKEKFLV*YPHKHYLPVFIPLL
Trigger: AAGCAAAGGAATGAATACAGGAAGATAGTGTTTGTGAGGGTATCACACGAGGAATTTTTCCTTTCTTCTCTCACCAGATGTTGAAATTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000513658.5
CDS TCA 90 bp TATGCATCTGAAAATCAGATAAACGATAAAGGTTCTTCCTCAAGGTaGTTAATGCCATACCATCAGATTCTCAATTTGATAACGCGCTCT +
Preference number: 5 (lower is better)
Translates to: YASENQINDKGSSSR*LMPYHQILNLITRS
Trigger: AGAGCGCGTTATCAAATTGAGAATCTGATGGTATGGCATTAATCACCTTGAGGAAGAACCTTTATCGTTTATCTGATTTTCAGATGCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504695.1
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTAATTTAGGACTCAGGTaGGAAACTATTGATAGGGAA +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHINLGLR*ETIDRE
Trigger: TTCCCTATCAATAGTTTCCAACCTGAGTCCTAAATT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTAATTTAGGACTCAGGTaGGAAACTATTGATAGGGAA +
Preference number: 5 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFNLGLR*ETIDRE
Trigger: TTCCCTATCAATAGTTTCCAACCTGAGTCCTAAATT...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTTGCCTCACGACATATTaGCCCAATTTTATAATCAGA +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHICLTTY*PNFIIR
Trigger: TCTGATTATAAAATTGGGCAAATATGTCGTGAGGCA...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTAGGGTGTCAACACTTTaGGAGCAAAATATAATCTTG +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHIRVSTL*EQNIIL
Trigger: CAAGATTATATTTTGCTCCAAAAGTGTTGACACCCT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp ATGCTTTCAGATCACCAGTCTAGAACATATTCTGCAAAGTGGCTAATTCACATTAGTCAGTATTCATTCTaGCAACCAATGAACAGTGTT +
Preference number: 5 (lower is better)
Translates to: MLSDHQSRTYSAKWLIHISQYSF*QPMNSV
Trigger: AACACTGTTCATTGGTTGCAAGAATGAATACTGACT...AATGTGAATTAGCCACTTTGCAGAATATGTTCTAGACTGGTGATCTGAAAGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264669.10
CDS-3UTR CAA 90 bp TTTGCTATTGGAGCAAAACCTTTTTGGACCATCAATACACAGTGCTATCCTTTTAGTCAGTATTCATTCTaGCAACCAATGAACAGTGTT +
Preference number: 5 (lower is better)
Translates to: FAIGAKPFWTINTQCYPFSQYSF*QPMNSV
Trigger: AACACTGTTCATTGGTTGCAAGAATGAATACTGACT...AAAAGGATAGCACTGTGTATTGATGGTCCAAAAAGGTTTTGCTCCAATAGCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507036.1
ENST00000511261.5
CDS TCA 72 bp ATGATGGAATTTGACCCCGAAAGGCTCAGGTTGTCGTaGACACAACCAAGGGCACAGACGCTCCTTGACTAC +
Preference number: 6 (lower is better)
Translates to: MMEFDPERLRLS*TQPRAQTLLDY
Trigger: GTAGTCAAGGAGCGTCTGTGCCCTTGGTTGTGTTCACGACAACCTGAGCCTTTCGGGGTCAAATTCCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264669.10
ENST00000504695.1
ENST00000507036.1
ENST00000507572.1
CDS GCA 72 bp TTCCATGCCACCTTTTCTGAGACGATTTTGGCATTCTaGCACCAGGTTCAGCAACAGGCTACTTTGAGGATC +
Preference number: 6 (lower is better)
Translates to: FHATFSETILAF*HQVQQQATLRI
Trigger: GATCCTCAAAGTAGCCTGTTGCTGAACCTGGTGGCAGAATGCCAAAATCGTCTCAGAAAAGGTGGCATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264669.10
ENST00000504695.1
ENST00000507036.1
CDS CAA 72 bp TTTAACATTTTGTTCAAGCCTGTCGCAGTCAGATACTaGAGAGAACACTGGTCCACCGAGTGGATGAAGGTC +
Preference number: 6 (lower is better)
Translates to: FNILFKPVAVRY*REHWSTEWMKV
Trigger: GACCTTCATCCACTCGGTGGACCAGTGTTCTCTCAAGTATCTGACTGCGACAGGCTTGAACAAAATGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264669.10
ENST00000504695.1
ENST00000507036.1
ENST00000507572.1
CDS CAA 90 bp CTCCTCATTTTTAACATTTTGTTCAAGCCTGTCGCAGTCAGATACTaGAGAGAACACTGGTCCACCGAGTGGATGAAGGTCATTTCCATT +
Preference number: 6 (lower is better)
Translates to: LLIFNILFKPVAVRY*REHWSTEWMKVISI
Trigger: AATGGAAATGACCTTCATCCACTCGGTGGACCAGTGTTCTCTCAAGTATCTGACTGCGACAGGCTTGAACAAAATGTTAAAAATGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264669.10
ENST00000504695.1
ENST00000507036.1
ENST00000507572.1
CDS CAA 90 bp GCTCAGTCTCCTGTAAAACATCTGACTCTCCTCATTTTTAACATTTaGTTCAAGCCTGTCGCAGTCAGATACTTGAGAGAACACTGGTCC +
Preference number: 6 (lower is better)
Translates to: AQSPVKHLTLLIFNI*FKPVAVRYLREHWS
Trigger: GGACCAGTGTTCTCTCAAGTATCTGACTGCGACAGGCTTGAACAAAATGTTAAAAATGAGGAGAGTCAGATGTTTTACAGGAGACTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264669.10
ENST00000504695.1
ENST00000507036.1
ENST00000507572.1
CDS TCA 72 bp GTTGTCGTGAACACAACCAAGGGCACAGACGCTCCTTaGCTACCTTGTGAACATGATTTAGAGGTTTATTTT +
Preference number: 6 (lower is better)
Translates to: VVVNTTKGTDAP*LPCEHDLEVYF
Trigger: AAAATAAACCTCTAAATCATGTTCACAAGGTAGTCAAGGAGCGTCTGTGCCCTTGGTTGTGTTCACGACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264669.10
ENST00000504695.1
ENST00000507036.1
ENST00000507572.1
CDS CCA 72 bp GCAGTCAGATACTTGAGAGAACACTGGTCCACCGAGTaGATGAAGGTCATTTCCATTTTTCGAATGAAACTT +
Preference number: 6 (lower is better)
Translates to: AVRYLREHWSTE*MKVISIFRMKL
Trigger: AAGTTTCATTCGAAAAATGGAAATGACCTTCATCCACTCGGTGGACCAGTGTTCTCTCAAGTATCTGACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264669.10
ENST00000504695.1
ENST00000507036.1
ENST00000507572.1
CDS TCA 72 bp ACTGAGTTCCATAAAAATGCAAGTTCTTCCATTGTTTaGGTTCTGAAGTCAGTATTCATTCTTGCAACCAAT +
Preference number: 6 (lower is better)
Translates to: TEFHKNASSSIV*VLKSVFILATN
Trigger: ATTGGTTGCAAGAATGAATACTGACTTCAGAACTCAAACAATGGAAGAACTTGCATTTTTATGGAACTCAGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264669.10
ENST00000513658.5