RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAS (Homo sapiens)

Ensembl gene IDs: ENSG00000026103

Ensembl transcript IDs: ENST00000313771.9, ENST00000352159.8, ENST00000355279.2, ENST00000355740.7, ENST00000357339.6, ENST00000371857.7, ENST00000460510.5, ENST00000466081.5, ENST00000477270.5, ENST00000479522.5, ENST00000484444.5, ENST00000487314.1, ENST00000488877.5, ENST00000492756.5, ENST00000494410.5, ENST00000494799.5, ENST00000612663.5, ENST00000640140.1, ENST00000640250.1, ENST00000640681.1, ENST00000652046.1

Found 541 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATGATTCTGGACCGTGGGGTCACCTCAACTCGGGAATGTGGCTGTaGTCATTGACATGGGAGAAGTCATGCTTGGGGCCACTAGGTGAA +
Preference number: 1 (lower is better)
Translates to: DDSGPWGHLNSGMWL*SLTWEKSCLGPLGE
Trigger: TTCACCTAGTGGCCCCAAGCATGACTTCTCCCATGTCAATGAGCACAGCCACATTCCCGAGTTGAGGTGACCCCACGGTCCAGAATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR CCA 90 bp CACAAAGAGAACCAGGTTCACCAGAATGAGGATGATTCTGGACCGTaGGGTCACCTCAACTCGGGAATGTGGCTGTGCTCATTGACATGG +
Preference number: 1 (lower is better)
Translates to: HKENQVHQNEDDSGP*GHLNSGMWLCSLTW
Trigger: CCATGTCAATGAGCACAGCCACATTCCCGAGTTGAGGTGACCCCACGGTCCAGAATCATCCTCATTCTGGTGAACCTGGTTCTCTTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR TCA 90 bp CTTCTGTCTAGAAATAGAAAACTGGAGAGCAGACAGCACAGACTATaGTGGCTCAGAAAAGAGAAATTAATGAGTGAACCCTGTGATCAC +
Preference number: 1 (lower is better)
Translates to: LLSRNRKLESRQHRL*WLRKEKLMSEPCDH
Trigger: GTGATCACAGGGTTCACTCATTAATTTCTCTTTTCTGAGCCATCATAGTCTGTGCTGTCTGCTCTCCAGTTTTCTATTTCTAGACAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR GCA 90 bp AACACAGGAGGGAACCCTAAGCAAAGCACAACTATCTTACCGACATaGTTACATGTTGAAATGCTAATACTTTGGGACTCATGGGTTAAA +
Preference number: 1 (lower is better)
Translates to: NTGGNPKQSTTILPT*LHVEMLILWDSWVK
Trigger: TTTAACCCATGAGTCCCAAAGTATTAGCATTTCAACATGTAAGCATGTCGGTAAGATAGTTGTGCTTTGCTTAGGGTTCCCTCCTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR GCA 90 bp TCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTaGTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTTTGGC +
Preference number: 1 (lower is better)
Translates to: SMKLMPITKQLNFLF*CVLDIVILDLIYFG
Trigger: GCCAAAATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR CCA 90 bp TTCCTCCCAAAGGAACTCAAAGTTCTTGCTCTGAGTTCACCAAAGTaGAATAGGGTGTTCTCTAACTTAATCTTGTCTTGCAAAGTAGAA +
Preference number: 1 (lower is better)
Translates to: FLPKELKVLALSSPK*NRVFSNLILSCKVE
Trigger: TTCTACTTTGCAAGACAAGATTAAGTTAGAGAACACCCTATTCCACTTTGGTGAACTCAGAGCAAGAACTTTGAGTTCCTTTGGGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR TCA 90 bp CAGATAGTTGTACAGAAACTGATGATTCAATATCTAAAAAGTGTCTaGTCTAATCAGAGGTCAGAAGACCCTGTGGGCATGCCAATAAAG +
Preference number: 1 (lower is better)
Translates to: QIVVQKLMIQYLKSV*SNQRSEDPVGMPIK
Trigger: CTTTATTGGCATGCCCACAGGGTCTTCTGACCTCTGATTAGATCAGACACTTTTTAGATATTGAATCATCAGTTTCTGTACAACTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR CCA 90 bp CCAGAGCATAATCTTAATCTTTCATCCTCTGCATACACTCCTATTTaGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTT +
Preference number: 1 (lower is better)
Translates to: PEHNLNLSSSAYTPI*VLSMPLHLLLMKFV
Trigger: AACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAATAGGAGTGTATGCAGAGGATGAAAGATTAAGATTATGCTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
3UTR CCA 90 bp TATGGTAAAATCTCTAGAATTATCAGAGGTAATTTAGAGGCAAAGTaGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGC +
Preference number: 1 (lower is better)
Translates to: YGKISRIIRGNLEAK*PACSVTDISAKGHS
Trigger: GCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGCCTCTAAATTACCTCTGATAATTCTAGAGATTTTACCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
3UTR TCA 90 bp ATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTaGCTTAGTGTCATGACTCCAGCAATAGTGGTGATATATTTACTC +
Preference number: 1 (lower is better)
Translates to: ILASLTPFFRTKPLT*LSVMTPAIVVIYLL
Trigger: GAGTAAATATATCACCACTATTGCTGGAGTCATGACACTAAGTCAAGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR TCA 90 bp AGGATAGTAGTAAGGAGAATCTTAAATCTTAGAAACTTGGGGGTATaGCAAGAGCAATTCCTAAATCCAGATGATGATTTTACCATTGCT +
Preference number: 1 (lower is better)
Translates to: RIVVRRILNLRNLGV*QEQFLNPDDDFTIA
Trigger: AGCAATGGTAAAATCATCATCTGGATTTAGGAATTGCTCTTGTCATACCCCCAAGTTTCTAAGATTTAAGATTCTCCTTACTACTATCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
3UTR-3UTR TCA 90 bp GGAATGTGGCTGTGCTCATTGACATGGGAGAAGTCATGCTTGGGGCCACTAGGTCTGTGCAAAGGTCTTTaGGGTAGAGCCTTATTTAAA +
Preference number: 2 (lower is better)
Translates to: GMWLCSLTWEKSCLGPLGLCKGL*GRALFK
Trigger: TTTAAATAAGGCTCTACCTCAAAGACCTTTGCACAG...ACCTAGTGGCCCCAAGCATGACTTCTCCCATGTCAATGAGCACAGCCACATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR-3UTR CCA 90 bp AACCACATCACCAAGTACAAAGACTTCTCCACTGTCTTCCTCCCAAAGGAACTCCCACATTCCAGTATCTaGAATACGAAACTGTTTGAC +
Preference number: 2 (lower is better)
Translates to: NHITKYKDFSTVFLPKELPHSSI*NTKLFD
Trigger: GTCAAACAGTTTCGTATTCCAGATACTGGAATGTGG...GAGTTCCTTTGGGAGGAAGACAGTGGAGAAGTCTTTGTACTTGGTGATGTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR-3UTR TCA 90 bp ATCCACATTCCAGTATCTGGAATACGAAACTGTTTGACGAATAATCATGTGCTGTACATGGGACATTATTaGACATTTTCGGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: IHIPVSGIRNCLTNNHVLYMGHY*TFSGVG
Trigger: CCCCACCCCCGAAAATGTTCAATAATGTCCCATGTA...CAGCACATGATTATTCGTCAAACAGTTTCGTATTCCAGATACTGGAATGTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR-3UTR TCA 90 bp AACCACATCACCAAGTACAAAGACTTCTCCACTGTCTTCCTCCCAAAGGAACTCGAATACGAAACTGTTTaGCGAATAATCATGTGCTGT +
Preference number: 2 (lower is better)
Translates to: NHITKYKDFSTVFLPKELEYETV*RIIMCC
Trigger: ACAGCACATGATTATTCGTCAAACAGTTTCGTATTC...GAGTTCCTTTGGGAGGAAGACAGTGGAGAAGTCTTTGTACTTGGTGATGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR-3UTR CCA 90 bp AACCACATCACCAAGTACAAAGACTTCTCCACTGTCTTCCTCCCAAAGGAACTCGGCAGTCTTGCCTTTTaGTGGACTATTAAGTATTTT +
Preference number: 2 (lower is better)
Translates to: NHITKYKDFSTVFLPKELGSLAF*WTIKYF
Trigger: AAAATACTTAATAGTCCACCAAAAGGCAAGACTGCC...GAGTTCCTTTGGGAGGAAGACAGTGGAGAAGTCTTTGTACTTGGTGATGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR-3UTR CCA 90 bp AACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTTTATTGCCACTGTTTCCTaGCATGGTGGTGCATGCCTG +
Preference number: 2 (lower is better)
Translates to: NFLFCCVLDIVILDLIYFIATVS*HGGACL
Trigger: CAGGCATGCACCACCATGCCAGGAAACAGTGGCAAT...AAAATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612663.5
3UTR-3UTR CCA 90 bp AGGGTGTTCTCTAACTTAATCTTGTCTTGCAAAGTAGAACTTGCACTTCTGGCCCTAGAAATAGAAAACTaGAGAGCAGACAGCACAGAC +
Preference number: 2 (lower is better)
Translates to: RVFSNLILSCKVELALLALEIEN*RADSTD
Trigger: GTCTGTGCTGTCTGCTCTCCAGTTTTCTATTTCTAG...GGCCAGAAGTGCAAGTTCTACTTTGCAAGACAAGATTAAGTTAGAGAACACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR CAA 90 bp GCTCTGAGTTCACCAAAGTGGAATAGGGTGTTCTCTAACTTAATCTaGTCTTGCAAAGTAGAACTTGCACTTCTGGCCATGAAGAATAAC +
Preference number: 2 (lower is better)
Translates to: ALSSPKWNRVFSNLI*SCKVELALLAMKNN
Trigger: GTTATTCTTCATGGCCAGAAGTGCAAGTTCTACTTTGCAAGACAAGATTAAGTTAGAGAACACCCTATTCCACTTTGGTGAACTCAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR-3UTR TCA 90 bp CTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTCAATTACGAAGCAGTTaGACTTTCTGTTCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: LSMKLMPITKQLNFLFCCQLRSS*TFCSAV
Trigger: CACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTG...ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR TCA 90 bp AGGGTGTTCTCTAACTTAATCTTGTCTTGCAAAGTAGAACTTGCACTTCTGGCCTGCCTGTTCAGTAACTaGTATTTCAGCAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: RVFSNLILSCKVELALLACLFSN*YFSKRS
Trigger: TGACCTTTTGCTGAAATATCAGTTACTGAACAGGCA...GGCCAGAAGTGCAAGTTCTACTTTGCAAGACAAGATTAAGTTAGAGAACACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR-3UTR TCA 90 bp TTGACGAATAATCATGTGCTGTTTGGAAGAGGTCTTCTTGGCAATAGCAACCTACAAAGCTACTTTCTCTaGGAGCAGTTAGTATCTCCA +
Preference number: 2 (lower is better)
Translates to: LTNNHVLFGRGLLGNSNLQSYFL*EQLVSP
Trigger: TGGAGATACTAACTGCTCTCAGAGAAAGTAGCTTTG...TAGGTTGCTATTGCCAAGAAGACCTCTTCCAAACAGCACATGATTATTCGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR-3UTR TCA 90 bp AGGGTGTTCTCTAACTTAATCTTGTCTTGCAAAGTAGAACTTGCACTTCTGGCCAGAAACTTGGGGGTATaGCAAGAGCAATTCCTAAAT +
Preference number: 2 (lower is better)
Translates to: RVFSNLILSCKVELALLARNLGV*QEQFLN
Trigger: ATTTAGGAATTGCTCTTGTCATACCCCCAAGTTTCT...GGCCAGAAGTGCAAGTTCTACTTTGCAAGACAAGATTAAGTTAGAGAACACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR-3UTR CCA 90 bp AGAGGTAATTTAGAGGCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCATGTTCTGCTGTGTCTTaGACATTGTCATTCTTGATC +
Preference number: 2 (lower is better)
Translates to: RGNLEAKWPACSVTDISACSAVS*TLSFLI
Trigger: GATCAAGAATGACAATGTCCAAGACACAGCAGAACA...TGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGCCTCTAAATTACCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352159.8
ENST00000355740.7
3UTR-3UTR TCA 90 bp AATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGGCCAATTACGAAGCAGTTaGACTTTCTGTTCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: NVLEDDSLNFLCKSTKIGQLRSS*TFCSAV
Trigger: CACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTG...GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR GCA 90 bp AAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTTCAGTCTGAATTTTCTCTaGAAGAGTACAAAGATTGGC +
Preference number: 2 (lower is better)
Translates to: KWPACSVTDISAKGHSFFSLNFL*KSTKIG
Trigger: GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACT...GAAGAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352159.8
ENST00000355740.7
3UTR-3UTR CCA 90 bp CATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCTTTGTTCTGCTGTGTCTTaGACATTGTCATTCTTGATC +
Preference number: 2 (lower is better)
Translates to: HEVDANYEAVELSVLLCLCSAVS*TLSFLI
Trigger: GATCAAGAATGACAATGTCCAAGACACAGCAGAACA...AAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR CAA 90 bp ATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGAT +
Preference number: 2 (lower is better)
Translates to: IRFFLSMKLMPITKQ*NFLFCCVLDIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR CAA 90 bp GAGATCTTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTaGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTC +
Preference number: 2 (lower is better)
Translates to: EIFNQCVIRFFLSMK*MPITKQLNFLFCCV
Trigger: GACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAAGATCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR TCA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGCAATTACGAAGCAGTTaGACTTTCTGTTCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKQLRSS*TFCSAV
Trigger: CACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTG...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR GCA 90 bp CTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGTTGAACTTTCTGTTCTaGTGTGTCTTGGACATTGTC +
Preference number: 2 (lower is better)
Translates to: LSFHEVDANYEAVELSVLLNFLF*CVLDIV
Trigger: GACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA...CAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR GCA 90 bp GTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGGCTTTCCTTTCTGTGCTTTCTaGATGTTTTCTGTACTTCCT +
Preference number: 2 (lower is better)
Translates to: VLEDDSLNFLCKSTKIGFPFCAF*MFSVLP
Trigger: AGGAAGTACAGAAAACATGCAGAAAGCACAGAAAGG...AAAGCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
3UTR-3UTR CCA 90 bp TCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCATGTTCTGCTGTGTCTTaGACATTGTCATTCTTGATC +
Preference number: 2 (lower is better)
Translates to: SMCHTLLSFHEVDANYEACSAVS*TLSFLI
Trigger: GATCAAGAATGACAATGTCCAAGACACAGCAGAACA...TGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR CAA 90 bp GTATACTTTCTTATCCACATTCCAGTATCTGGAATACGAAACTGTTaGACGAATAATCATGTGCTGTTTGGAAGAGGTCTTCTTGGCAAT +
Preference number: 2 (lower is better)
Translates to: VYFLIHIPVSGIRNC*TNNHVLFGRGLLGN
Trigger: ATTGCCAAGAAGACCTCTTCCAAACAGCACATGATTATTCGTCAAACAGTTTCGTATTCCAGATACTGGAATGTGGATAAGAAAGTATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR-3UTR TCA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTCAATTACGAAGCAGTTaGACTTTCTGTTCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKIQLRSS*TFCSAV
Trigger: CACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTG...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR TCA 90 bp TTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTTATAACTATCTTCACAGTTTAATTAGGCCATTAAGATaGGCACCAAGGCAAAAATGG +
Preference number: 2 (lower is better)
Translates to: FFRWFQVSASVYNYLHSLIRPLR*APRQKW
Trigger: CCATTTTTGCCTTGGTGCTCATCTTAATGGCCTAAT...TAAACTGTGAAGATAGTTATAAACTGAAGCAGATACCTGGAACCACCTAAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
3UTR-3UTR TCA 90 bp CTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGAAAGTTGGAGATTCATaGGAACCTTGGTTTTCCTTT +
Preference number: 2 (lower is better)
Translates to: LSFHEVDANYEAVELSVLKVGDS*EPWFSF
Trigger: AAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTT...CAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
3UTR-3UTR GCA 90 bp TTGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATCCTTTCTGTGCTTTCTaGATGTTTTCTGTACTTCCT +
Preference number: 2 (lower is better)
Translates to: LNFLFCCVLDIVILDLIYPFCAF*MFSVLP
Trigger: AGGAAGTACAGAAAACATGCAGAAAGCACAGAAAGG...ATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
3UTR-3UTR TCA 90 bp AATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGAAAGTTGGAGATTCATaGGAACCTTGGTTTTCCTTT +
Preference number: 2 (lower is better)
Translates to: NQCVIRFFLSMKLMPITKKVGDS*EPWFSF
Trigger: AAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTT...CTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
3UTR-3UTR TCA 90 bp TTGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATAAAGTTGGAGATTCATaGGAACCTTGGTTTTCCTTT +
Preference number: 2 (lower is better)
Translates to: LNFLFCCVLDIVILDLIYKVGDS*EPWFSF
Trigger: AAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTT...ATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
3UTR-3UTR GCA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTTTGAACTTTCTGTTCTaGTGTGTCTTGGACATTGTC +
Preference number: 2 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKILNFLF*CVLDIV
Trigger: GACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR TCA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTATTGAGGATGATAGTCTaGATTTTCTCTGCAAGAGTA +
Preference number: 2 (lower is better)
Translates to: RQNHEILKIYKYVGSSALLRMIV*IFSARV
Trigger: TACTCTTGCAGAGAAAATTCAGACTATCATCCTCAA...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
3UTR GCA 72 bp GGACCGTGGGGTCACCTCAACTCGGGAATGTGGCTGTaGTCATTGACATGGGAGAAGTCATGCTTGGGGCCA +
Preference number: 3 (lower is better)
Translates to: GPWGHLNSGMWL*SLTWEKSCLGP
Trigger: TGGCCCCAAGCATGACTTCTCCCATGTCAATGAGCACAGCCACATTCCCGAGTTGAGGTGACCCCACGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR CCA 72 bp AACCAGGTTCACCAGAATGAGGATGATTCTGGACCGTaGGGTCACCTCAACTCGGGAATGTGGCTGTGCTCA +
Preference number: 3 (lower is better)
Translates to: NQVHQNEDDSGP*GHLNSGMWLCS
Trigger: TGAGCACAGCCACATTCCCGAGTTGAGGTGACCCCACGGTCCAGAATCATCCTCATTCTGGTGAACCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR TCA 72 bp TATTTCCATGTTTGGGGGTGCATTAGGCCATTAAGATaGGCACCAAGGCAAAAATGGAGAGGTGGCAAAGCT +
Preference number: 3 (lower is better)
Translates to: YFHVWGCIRPLR*APRQKWRGGKA
Trigger: AGCTTTGCCACCTCTCCATTTTTGCCTTGGTGCTCATCTTAATGGCCTAATGCACCCCCAAACATGGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
3UTR-3UTR CAA 90 bp GCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCGCTGTGTCTTGGACATaGTCATTCTTGATCTCATCT +
Preference number: 3 (lower is better)
Translates to: AKWPACSVTDISAKGHSFAVSWT*SFLISS
Trigger: AGATGAGATCAAGAATGACAATGTCCAAGACACAGC...GAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352159.8
ENST00000355740.7
3UTR TCA 72 bp CCCTGTGGGCATGCCAATAAAGAAGACCAAGATGTTTaGATATGCAATGCTTTCAATGTGATCTGTGAGCTC +
Preference number: 3 (lower is better)
Translates to: PCGHANKEDQDV*ICNAFNVICEL
Trigger: GAGCTCACAGATCACATTGAAAGCATTGCATATTCAAACATCTTGGTCTTCTTTATTGGCATGCCCACAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR GCA 72 bp GGGAACCCTAAGCAAAGCACAACTATCTTACCGACATaGTTACATGTTGAAATGCTAATACTTTGGGACTCA +
Preference number: 3 (lower is better)
Translates to: GNPKQSTTILPT*LHVEMLILWDS
Trigger: TGAGTCCCAAAGTATTAGCATTTCAACATGTAAGCATGTCGGTAAGATAGTTGTGCTTTGCTTAGGGTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR-3UTR CAA 90 bp CATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCTTGCTGTGTCTTGGACATaGTCATTCTTGATCTCATCT +
Preference number: 3 (lower is better)
Translates to: HEVDANYEAVELSVLLCLAVSWT*SFLISS
Trigger: AGATGAGATCAAGAATGACAATGTCCAAGACACAGC...AAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp AAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTTCTTTCTTTCCATGAAGTaGATGCCAATTACGAAGCAG +
Preference number: 3 (lower is better)
Translates to: KWPACSVTDISAKGHSFFFLSMK*MPITKQ
Trigger: CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA...GAAGAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352159.8
ENST00000355740.7
3UTR-3UTR CAA 90 bp GTCACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAGCTGTGTCTTGGACATaGTCATTCTTGATCTCATCT +
Preference number: 3 (lower is better)
Translates to: VTSNVLEDDSLNFLCKSTAVSWT*SFLISS
Trigger: AGATGAGATCAAGAATGACAATGTCCAAGACACAGC...TGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp GTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGGCTTTGCTGTGTCTTGGACATaGTCATTCTTGATCTCATCT +
Preference number: 3 (lower is better)
Translates to: VLEDDSLNFLCKSTKIGFAVSWT*SFLISS
Trigger: AGATGAGATCAAGAATGACAATGTCCAAGACACAGC...AAAGCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp AATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGGCCTGTTCTGCTGTGTCTaGGACATTGTCATTCTTGAT +
Preference number: 3 (lower is better)
Translates to: NVLEDDSLNFLCKSTKIGLFCCV*DIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAG...GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp TCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCACTGTTCTGCTGTGTCTaGGACATTGTCATTCTTGAT +
Preference number: 3 (lower is better)
Translates to: SMCHTLLSFHEVDANYEALFCCV*DIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAG...TGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp AATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGGCCCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: NVLEDDSLNFLCKSTKIGPITKQ*NFLFCC
Trigger: ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGG...GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp CTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: LSFHEVDANYEAVELSVLPITKQ*NFLFCC
Trigger: ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGG...CAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp CTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTTTTCTTTCCATGAAGTaGATGCCAATTACGAAGCAG +
Preference number: 3 (lower is better)
Translates to: LSMKLMPITKQLNFLFCCFLSMK*MPITKQ
Trigger: CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA...ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp AAAATCCTCCATAAATGGAAGTTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTTTTCTAAGGGCAGTCTaGCCTTTTGGTGGACTATTA +
Preference number: 3 (lower is better)
Translates to: KILHKWKFFRWFQVSASVFLRAV*PFGGLL
Trigger: TAATAGTCCACCAAAAGGCAAGACTGCCCTTAGAAA...AACTGAAGCAGATACCTGGAACCACCTAAAGAACTTCCATTTATGGAGGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
3UTR-3UTR CAA 90 bp ATGTGCTGTTTGGAAGAGGTCTTCTTGGCAATAGCAACCTATGGAAATAATTATTTACATGGGACATTATaGAACATTTTCGGGGGTGGG +
Preference number: 3 (lower is better)
Translates to: MCCLEEVFLAIATYGNNYLHGTL*NIFGGG
Trigger: CCCACCCCCGAAAATGTTCAATAATGTCCCATGTAA...ATAATTATTTCCATAGGTTGCTATTGCCAAGAAGACCTCTTCCAAACAGCACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR TCA 72 bp GTACAGAAACTGATGATTCAATATCTAAAAAGTGTCTaGTCTAATCAGAGGTCAGAAGACCCTGTGGGCATG +
Preference number: 3 (lower is better)
Translates to: VQKLMIQYLKSV*SNQRSEDPVGM
Trigger: CATGCCCACAGGGTCTTCTGACCTCTGATTAGATCAGACACTTTTTAGATATTGAATCATCAGTTTCTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR-3UTR CAA 90 bp CTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGTTCTGCTGTGTCTaGGACATTGTCATTCTTGAT +
Preference number: 3 (lower is better)
Translates to: LLSFHEVDANYEAVELSVLFCCV*DIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAG...AACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACCTGTTCTGCTGTGTCTaGGACATTGTCATTCTTGAT +
Preference number: 3 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNLFCCV*DIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAG...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp CTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: LLSFHEVDANYEAVELSVPITKQ*NFLFCC
Trigger: ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGG...AACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp AGTAATACTCTCCTGCTCAAAATGCTTTTGATGCCTGAGAAAGAAGTAGGTAGTCCACTGCATTTACTCTaGATGAAGTTTGTTTTCCCA +
Preference number: 3 (lower is better)
Translates to: SNTLLLKMLLMPEKEVGSPLHLL*MKFVFP
Trigger: TGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGG...ACTACCTACTTCTTTCTCAGGCATCAAAAGCATTTTGAGCAGGAGAGTATTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
3UTR-3UTR CAA 90 bp TTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCATCAGATAAATTTATaGCCACTGTTTCCCCAAACA +
Preference number: 3 (lower is better)
Translates to: FHEVDANYEAVELSVLLCHQINL*PLFPQT
Trigger: TGTTTGGGGAAACAGTGGCAATAAATTTATCTGATG...ACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494410.5
3UTR-3UTR CAA 90 bp TTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCAGATTCATGAGAACCTaGGTTTTCCTTTCTGTGCTT +
Preference number: 3 (lower is better)
Translates to: FLSMKLMPITKQLNFLFCRFMRT*VFLSVL
Trigger: AAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCT...GCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
3UTR-3UTR CAA 90 bp TGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAAAGATTCATGAGAACCTaGGTTTTCCTTTCTGTGCTT +
Preference number: 3 (lower is better)
Translates to: CHTLLSFHEVDANYEAVERFMRT*VFLSVL
Trigger: AAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCT...TTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
3UTR TCA 72 bp TCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTaGCTTAGTGTCATGACTCCAGCAATAGTGGTGATA +
Preference number: 3 (lower is better)
Translates to: SLTPFFRTKPLT*LSVMTPAIVVI
Trigger: TATCACCACTATTGCTGGAGTCATGACACTAAGTCAAGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR GCA 72 bp AAGTGGAATAGGGTGTTCTCTAACTTAATCTTGTCTTaGAAAGTAGAACTTGCACTTCTGGCCATGAAGAAT +
Preference number: 3 (lower is better)
Translates to: KWNRVFSNLILS*KVELALLAMKN
Trigger: ATTCTTCATGGCCAGAAGTGCAAGTTCTACTTTGCAAGACAAGATTAAGTTAGAGAACACCCTATTCCACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR-3UTR CAA 90 bp AATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGGCTGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 3 (lower is better)
Translates to: NVLEDDSLNFLCKSTKIGWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp TTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 3 (lower is better)
Translates to: FLSMKLMPITKQLNFLFCWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...GCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTCCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKIPITKQ*NFLFCC
Trigger: ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGG...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGTTTCTTTCCATGAAGTaGATGCCAATTACGAAGCAG +
Preference number: 3 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKFLSMK*MPITKQ
Trigger: CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp GAGCATAATCTTAATCTTTCATCCTCTGCATACACTCCTATTTGGGTACTTAGCACTCTAGACCAAGCTTaGGATTTCATTTCTGAAGTT +
Preference number: 3 (lower is better)
Translates to: EHNLNLSSSAYTPIWVLSTLDQA*DFISEV
Trigger: AACTTCAGAAATGAAATCCAAAGCTTGGTCTAGAGT...GCTAAGTACCCAAATAGGAGTGTATGCAGAGGATGAAAGATTAAGATTATGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352159.8
ENST00000355740.7
3UTR-3UTR CAA 90 bp AATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGAGATTCATGAGAACCTaGGTTTTCCTTTCTGTGCTT +
Preference number: 3 (lower is better)
Translates to: NQCVIRFFLSMKLMPITKRFMRT*VFLSVL
Trigger: AAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCT...CTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
3UTR CCA 72 bp ATCTCTAGAATTATCAGAGGTAATTTAGAGGCAAAGTaGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAA +
Preference number: 3 (lower is better)
Translates to: ISRIIRGNLEAK*PACSVTDISAK
Trigger: TTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGCCTCTAAATTACCTCTGATAATTCTAGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
3UTR-3UTR CAA 90 bp TTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 3 (lower is better)
Translates to: FFLSMKLMPITKQLNFLFWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...GAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp GAGATCTTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCATGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 3 (lower is better)
Translates to: EIFNQCVIRFFLSMKLMPWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...TGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAAGATCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR-3UTR CAA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTAGATTCATGAGAACCTaGGTTTTCCTTTCTGTGCTT +
Preference number: 3 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKIRFMRT*VFLSVL
Trigger: AAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCT...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
3UTR-3UTR CAA 90 bp AACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTTTTGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 3 (lower is better)
Translates to: NFLFCCVLDIVILDLIYFWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...AAAATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR CAA 72 bp TGGGGTCACCTCAACTCGGGAATGTGGCTGTGCTCATaGACATGGGAGAAGTCATGCTTGGGGCCACTAGGT +
Preference number: 4 (lower is better)
Translates to: WGHLNSGMWLCS*TWEKSCLGPLG
Trigger: ACCTAGTGGCCCCAAGCATGACTTCTCCCATGTCAATGAGCACAGCCACATTCCCGAGTTGAGGTGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CCA 90 bp GGAATGTGGCTGTGCTCATTGACATGGGAGAAGTCATGCTTGGGGCCACTAGGTTCCAGATGCCCAGCATaGTTGTTGAGCAATCCTCCG +
Preference number: 4 (lower is better)
Translates to: GMWLCSLTWEKSCLGPLGSRCPA*LLSNPP
Trigger: CGGAGGATTGCTCAACAACCATGCTGGGCATCTGGA...ACCTAGTGGCCCCAAGCATGACTTCTCCCATGTCAATGAGCACAGCCACATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp CCTTTGGGTGATTCTCCTACCCAGTATGCCCACCACAAAGAGAACCAGGTTCACAGCAATCCTCCGAAGTaGAAGAGCTTCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: PLGDSPTQYAHHKENQVHSNPPK*KSFPNS
Trigger: GGAGTTGGGGAAGCTCTTTCACTTCGGAGGATTGCT...GTGAACCTGGTTCTCTTTGTGGTGGGCATACTGGGTAGGAGAATCACCCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CCA 90 bp CTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGGAAGGAAGCCTCGCTaGGGAACGCCCGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSMKLMPITKQLNFLFCCGRKPR*GTPGLG
Trigger: CCCCAACCCGGGCGTTCCCCAGCGAGGCTTCCTTCC...ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR TCA 90 bp CTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTTCCCCAACTCCGTACTaGGCGGGTCCACCAACCCGC +
Preference number: 4 (lower is better)
Translates to: LSMKLMPITKQLNFLFCCSPTPY*AGPPTR
Trigger: GCGGGTTGGTGGACCCGCTCAGTACGGAGTTGGGGA...ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR GCA 90 bp CGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTCAGGGTGTGTTCCGTaGCAGTGCCCGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RFFLSMKLMPITKQLNFLSGCVP*QCPPLR
Trigger: CCTCAGGGGCGGGCACTGGCACGGAACACACCCTGA...CAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTCAGGGTGTGTTCCGTaGCAGTGCCCGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SFHEVDANYEAVELSVLLSGCVP*QCPPLR
Trigger: CCTCAGGGGCGGGCACTGGCACGGAACACACCCTGA...CAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCATGTGTTCCGTGCCAGTaGCCGCCCCTGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SMCHTLLSFHEVDANYEACVPCQ*PPLRLQ
Trigger: CTGGAGCCTCAGGGGCGGGCACTGGCACGGAACACA...TGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp GTCACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACATCAGGGTGTGTTCCGTaGCAGTGCCCGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VTSNVLEDDSLNFLCKSTSGCVP*QCPPLR
Trigger: CCTCAGGGGCGGGCACTGGCACGGAACACACCCTGA...TGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR CCA 90 bp TTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCCTGGGCAGCCAGGGCTaGCCTCAGGGTGTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: FLSMKLMPITKQLNFLFCLGSQG*PQGVFR
Trigger: ACGGAACACACCCTGAGGCCAGCCCTGGCTGCCCAG...GCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR TCA 90 bp GAGATCTTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCATCCCCAACTCCGTACTaGGCGGGTCCACCAACCCGC +
Preference number: 4 (lower is better)
Translates to: EIFNQCVIRFFLSMKLMPSPTPY*AGPPTR
Trigger: GCGGGTTGGTGGACCCGCTCAGTACGGAGTTGGGGA...TGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAAGATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR TCA 90 bp AATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGTCCCCAACTCCGTACTaGGCGGGTCCACCAACCCGC +
Preference number: 4 (lower is better)
Translates to: NQCVIRFFLSMKLMPITKSPTPY*AGPPTR
Trigger: GCGGGTTGGTGGACCCGCTCAGTACGGAGTTGGGGA...CTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR TCA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGTCCCCAACTCCGTACTaGGCGGGTCCACCAACCCGC +
Preference number: 4 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKSPTPY*AGPPTR
Trigger: GCGGGTTGGTGGACCCGCTCAGTACGGAGTTGGGGA...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR GCA 90 bp GCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCCCTGTGTGTCACTCTTaGGCGAGATCAGAGACGAGC +
Preference number: 4 (lower is better)
Translates to: AKWPACSVTDISAKGHSFPVCHS*ARSETS
Trigger: GCTCGTCTCTGATCTCGCGCAAGAGTGACACACAGG...GAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR GCA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGTGTGTTCCGTGCCAGTaGCCGCCCCTGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKCVPCQ*PPLRLQ
Trigger: CTGGAGCCTCAGGGGCGGGCACTGGCACGGAACACA...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTGTGTTCCGTGCCAGTaGCCGCCCCTGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNCVPCQ*PPLRLQ
Trigger: CTGGAGCCTCAGGGGCGGGCACTGGCACGGAACACA...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CCA 90 bp TTGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATCTGGGCAGCCAGGGCTaGCCTCAGGGTGTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: LNFLFCCVLDIVILDLIYLGSQG*PQGVFR
Trigger: ACGGAACACACCCTGAGGCCAGCCCTGGCTGCCCAG...ATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR CCA 90 bp GAGATCTTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCACTGGGCAGCCAGGGCTaGCCTCAGGGTGTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: EIFNQCVIRFFLSMKLMPLGSQG*PQGVFR
Trigger: ACGGAACACACCCTGAGGCCAGCCCTGGCTGCCCAG...TGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAAGATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR TCA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTATCCCCAACTCCGTACTaGGCGGGTCCACCAACCCGC +
Preference number: 4 (lower is better)
Translates to: RQNHEILKIYKYVGSSALSPTPY*AGPPTR
Trigger: GCGGGTTGGTGGACCCGCTCAGTACGGAGTTGGGGA...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000652046.1
CDS-3UTR TCA 90 bp ATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGGCTGCAGTGAGCCATaGTTGCACCCCTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: MCHTLLSFHEVDANYEAVGCSEP*LHPCTP
Trigger: TGGAGTGCAGGGGTGCAATCATGGCTCACTGCAGCC...AACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612663.5
CDS-3UTR TCA 90 bp GATTCTGGACCGTGGGGTCACCTCAACTCGGGAATGTGGCTGTGCTCATTGACAGACATGCTTACATGTTaGAATGCTAATACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: DSGPWGHLNSGMWLCSLTDMLTC*NANTLG
Trigger: TCCCAAAGTATTAGCATTTCAACATGTAAGCATGTC...TGTCAATGAGCACAGCCACATTCCCGAGTTGAGGTGACCCCACGGTCCAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp GGAATGTGGCTGTGCTCATTGACATGGGAGAAGTCATGCTTGGGGCCACTAGGTTCAAAGTTCTTGCTCTaGGTTCACCAAAGTGGAATA +
Preference number: 4 (lower is better)
Translates to: GMWLCSLTWEKSCLGPLGSKFLL*VHQSGI
Trigger: TATTCCACTTTGGTGAACTCAGAGCAAGAACTTTGA...ACCTAGTGGCCCCAAGCATGACTTCTCCCATGTCAATGAGCACAGCCACATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp GCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTCTGCAGCTCATGGGTaGCCTTTGGGTGATTCTCCT +
Preference number: 4 (lower is better)
Translates to: AKWPACSVTDISAKGHSFSAAHG*PLGDSP
Trigger: AGGAGAATCACCCAAAGGTCACCCATGAGCTGCAGA...GAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR GCA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTATCAGGGTGTGTTCCGTaGCAGTGCCCGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RQNHEILKIYKYVGSSALSGCVP*QCPPLR
Trigger: CCTCAGGGGCGGGCACTGGCACGGAACACACCCTGA...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
CDS-3UTR GCA 90 bp AAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTTCGTAGGAGGGTCCAGATaGCCAGCATGGTTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: KWPACSVTDISAKGHSFFVGGSR*PAWLLS
Trigger: GCTCAACAACCATGCTGGGCATCTGGACCCTCCTAC...GAAGAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp AGAGGTAATTTAGAGGCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCATACTCCTTCCCTTCTTaGCAGGGCACGCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RGNLEAKWPACSVTDISAYSFPS*QGTQSG
Trigger: ACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTA...TGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGCCTCTAAATTACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp ATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTCTGGGCAGCCAGGGCTaGCCTCAGGGTGTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: ISSILASLTPFFRTKPLTLGSQG*PQGVFR
Trigger: ACGGAACACACCCTGAGGCCAGCCCTGGCTGCCCAG...AGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR CCA 90 bp AACCACATCACCAAGTACAAAGACTTCTCCACTGTCTTCCTCCCAAAGGAACTCCTGTGCTCATTGACATaGGAGAAGTCATGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: NHITKYKDFSTVFLPKELLCSLT*EKSCLG
Trigger: CCCCAAGCATGACTTCTCCCATGTCAATGAGCACAG...GAGTTCCTTTGGGAGGAAGACAGTGGAGAAGTCTTTGTACTTGGTGATGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp TGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAATGGGGAGGGCTCCATTaGTTCAGCAACTTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CHTLLSFHEVDANYEAVEWGGLH*FSNLAC
Trigger: GCAGGCCAAGTTGCTGAATCAATGGAGCCCTCCCCA...TTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR TCA 90 bp TCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCGCCCAGCATGGTTGTTaGGCAATCCTCCGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: SMKLMPITKQLNFLFCCVAQHGC*AILRSE
Trigger: TTCACTTCGGAGGATTGCTCAACAACCATGCTGGGC...GACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR TCA 90 bp GCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTGTGGCTGTGCTCATTaGCATGGGAGAAGTCATGCT +
Preference number: 4 (lower is better)
Translates to: AKWPACSVTDISAKGHSFCGCAH*HGRSHA
Trigger: AGCATGACTTCTCCCATGTCAATGAGCACAGCCACA...GAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp GCATACACTCCTATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTGGGTGACCTTTGGGTaGTTCTCCTACCCAGTATGC +
Preference number: 4 (lower is better)
Translates to: AYTPIWVLSMPLHLLLMKWVTFG*FSYPVC
Trigger: GCATACTGGGTAGGAGAATCACCCAAAGGTCACCCA...CTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAATAGGAGTGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR GCA 90 bp CCTTTGGGTGATTCTCCTACCCAGTATGCCCACCACAAAGAGAACCAGGTTCACCCTTTCTGTGCTTTCTaGATGTTTTCTGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: PLGDSPTQYAHHKENQVHPFCAF*MFSVLP
Trigger: AGGAAGTACAGAAAACATGCAGAAAGCACAGAAAGG...GTGAACCTGGTTCTCTTTGTGGTGGGCATACTGGGTAGGAGAATCACCCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR GCA 90 bp CATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCTTCCTGTGTGTCACTCTTaGGCGAGATCAGAGACGAGC +
Preference number: 4 (lower is better)
Translates to: HEVDANYEAVELSVLLCLPVCHS*ARSETS
Trigger: GCTCGTCTCTGATCTCGCGCAAGAGTGACACACAGG...AAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp CTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTAGGAGGGTCCAGATaGCCAGCATGGTTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LSMKLMPITKQLNFLFCCVGGSR*PAWLLS
Trigger: GCTCAACAACCATGCTGGGCATCTGGACCCTCCTAC...ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTGTAGGAGGGTCCAGATaGCCAGCATGGTTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: FHEVDANYEAVELSVLLCVGGSR*PAWLLS
Trigger: GCTCAACAACCATGCTGGGCATCTGGACCCTCCTAC...ACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp GTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACGCAGGGCACGCAGTCTaGTTCATCCCCATTGACTGT +
Preference number: 4 (lower is better)
Translates to: VIRFFLSMKLMPITKQLNAGHAV*FIPIDC
Trigger: ACAGTCAATGGGGATGAACCAGACTGCGTGCCCTGC...GTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp CGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTACTCCTTCCCTTCTTaGCAGGGCACGCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RFFLSMKLMPITKQLNFLYSFPS*QGTQSG
Trigger: ACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTA...CAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp GTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTACTCCTTCCCTTCTTaGCAGGGCACGCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: VIRFFLSMKLMPITKQLNYSFPS*QGTQSG
Trigger: ACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTA...GTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp AAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTTCTCCAGATGCCCAGCATaGTTGTTGAGCAATCCTCCG +
Preference number: 4 (lower is better)
Translates to: KWPACSVTDISAKGHSFFSRCPA*LLSNPP
Trigger: CGGAGGATTGCTCAACAACCATGCTGGGCATCTGGA...GAAGAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR TCA 90 bp CGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGCCCCAGAAGCGTCTTTaGACACCTGTGTGTCACTCT +
Preference number: 4 (lower is better)
Translates to: RFFLSMKLMPITKQLNFLPQKRL*TPVCHS
Trigger: AGAGTGACACACAGGTGTTCAAAGACGCTTCTGGGG...CAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000612663.5
CDS-3UTR TCA 90 bp CTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGACTTTGAGGCTGCAGTaGGCCATGATTGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: LSFHEVDANYEAVELSVLTLRLQ*AMIAPL
Trigger: CAGGGGTGCAATCATGGCTCACTGCAGCCTCAAAGT...CAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612663.5
CDS-3UTR TCA 90 bp TTGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATGGCAGGAGGATCACTTaGGCCCAGGACTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LNFLFCCVLDIVILDLIYGRRIT*AQDFEA
Trigger: AGCCTCAAAGTCCTGGGCTCAAGTGATCCTCCTGCC...ATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612663.5
CDS-3UTR CCA 90 bp AAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTTCAGCTTTCCTTTCACCTaGAGGACAGGGCTTATGGCA +
Preference number: 4 (lower is better)
Translates to: KWPACSVTDISAKGHSFFSFPFT*RTGLMA
Trigger: TGCCATAAGCCCTGTCCTCCAGGTGAAAGGAAAGCT...GAAGAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp TCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGCAGGGCACGCAGTCTaGTTCATCCCCATTGACTGT +
Preference number: 4 (lower is better)
Translates to: SMCHTLLSFHEVDANYEAAGHAV*FIPIDC
Trigger: ACAGTCAATGGGGATGAACCAGACTGCGTGCCCTGC...TGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp GAGCATAATCTTAATCTTTCATCCTCTGCATACACTCCTATTTGGGTACTTAGCGCAGGGCACGCAGTCTaGTTCATCCCCATTGACTGT +
Preference number: 4 (lower is better)
Translates to: EHNLNLSSSAYTPIWVLSAGHAV*FIPIDC
Trigger: ACAGTCAATGGGGATGAACCAGACTGCGTGCCCTGC...GCTAAGTACCCAAATAGGAGTGTATGCAGAGGATGAAAGATTAAGATTATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp GTCACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAGCAGGGCACGCAGTCTaGTTCATCCCCATTGACTGT +
Preference number: 4 (lower is better)
Translates to: VTSNVLEDDSLNFLCKSTAGHAV*FIPIDC
Trigger: ACAGTCAATGGGGATGAACCAGACTGCGTGCCCTGC...TGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp ATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCAGCAGGGCACGCAGTCTaGTTCATCCCCATTGACTGT +
Preference number: 4 (lower is better)
Translates to: IWVLSMPLHLLLMKFVFPAGHAV*FIPIDC
Trigger: ACAGTCAATGGGGATGAACCAGACTGCGTGCCCTGC...TGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp ATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTTACTCCTTCCCTTCTTaGCAGGGCACGCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: MCHTLLSFHEVDANYEAVYSFPS*QGTQSG
Trigger: ACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTA...AACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp AATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGGCTACTCCTTCCCTTCTTaGCAGGGCACGCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: NVLEDDSLNFLCKSTKIGYSFPS*QGTQSG
Trigger: ACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTA...GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp AAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTTCGTTTACATCTGCACTTaGTATTCTGGGTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: KWPACSVTDISAKGHSFFVYICT*YSGSGC
Trigger: GCACCCGGACCCAGAATACCAAGTGCAGATGTAAAC...GAAGAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp AGAGGTAATTTAGAGGCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCACTCAACTCGGGAATGTaGCTGTGCTCATTGACATGG +
Preference number: 4 (lower is better)
Translates to: RGNLEAKWPACSVTDISALNSGM*LCSLTW
Trigger: CCATGTCAATGAGCACAGCCACATTCCCGAGTTGAG...TGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGCCTCTAAATTACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CCA 90 bp ATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCAGATGATTCTGGACCGTaGGGTCACCTCAACTCGGGA +
Preference number: 4 (lower is better)
Translates to: IWVLSMPLHLLLMKFVFPDDSGP*GHLNSG
Trigger: TCCCGAGTTGAGGTGACCCCACGGTCCAGAATCATC...TGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp TCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAAGCAATCCTCCGAAGTaGAAGAGCTTCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: SMCHTLLSFHEVDANYEASNPPK*KSFPNS
Trigger: GGAGTTGGGGAAGCTCTTTCACTTCGGAGGATTGCT...TGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR TCA 90 bp CCACTGTTTCAGGATTTAAAGTTGGAGATTCATGAGAACCTTGGTTTTCCTTTCGCCCAGCATGGTTGTTaGGCAATCCTCCGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: PLFQDLKLEIHENLGFPFAQHGC*AILRSE
Trigger: TTCACTTCGGAGGATTGCTCAACAACCATGCTGGGC...GAAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTTAAATCCTGAAACAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484444.5
CDS-3UTR TCA 90 bp GTCACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAGCCCAGCATGGTTGTTaGGCAATCCTCCGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: VTSNVLEDDSLNFLCKSTAQHGC*AILRSE
Trigger: TTCACTTCGGAGGATTGCTCAACAACCATGCTGGGC...TGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR TCA 90 bp TATGGTAAAATCTCTAGAATTATCAGAGGTAATTTAGAGGCAAAGTGGCCTGCCGCCCAGCATGGTTGTTaGGCAATCCTCCGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: YGKISRIIRGNLEAKWPAAQHGC*AILRSE
Trigger: TTCACTTCGGAGGATTGCTCAACAACCATGCTGGGC...GGCAGGCCACTTTGCCTCTAAATTACCTCTGATAATTCTAGAGATTTTACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR TCA 90 bp AGGGTGTTCTCTAACTTAATCTTGTCTTGCAAAGTAGAACTTGCACTTCTGGCCTACATGGGACATTATTaGACATTTTCGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RVFSNLILSCKVELALLAYMGHY*TFSGVG
Trigger: CCCCACCCCCGAAAATGTTCAATAATGTCCCATGTA...GGCCAGAAGTGCAAGTTCTACTTTGCAAGACAAGATTAAGTTAGAGAACACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR GCA 90 bp CTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTGTAGGAGGGTCCAGATaGCCAGCATGGTTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LLSFHEVDANYEAVELSVVGGSR*PAWLLS
Trigger: GCTCAACAACCATGCTGGGCATCTGGACCCTCCTAC...AACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACGTAGGAGGGTCCAGATaGCCAGCATGGTTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNVGGSR*PAWLLS
Trigger: GCTCAACAACCATGCTGGGCATCTGGACCCTCCTAC...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp CTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTAGCTTTCCTTTCACCTaGAGGACAGGGCTTATGGCA +
Preference number: 4 (lower is better)
Translates to: LSMKLMPITKQLNFLFCCSFPFT*RTGLMA
Trigger: TGCCATAAGCCCTGTCCTCCAGGTGAAAGGAAAGCT...ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp CTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTGCAGGGCACGCAGTCTaGTTCATCCCCATTGACTGT +
Preference number: 4 (lower is better)
Translates to: LLSFHEVDANYEAVELSVAGHAV*FIPIDC
Trigger: ACAGTCAATGGGGATGAACCAGACTGCGTGCCCTGC...AACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGGCAGGGCACGCAGTCTaGTTCATCCCCATTGACTGT +
Preference number: 4 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKAGHAV*FIPIDC
Trigger: ACAGTCAATGGGGATGAACCAGACTGCGTGCCCTGC...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGTACTCCTTCCCTTCTTaGCAGGGCACGCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKYSFPS*QGTQSG
Trigger: ACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTA...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp GTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGGCTTTTCCAGATGCCCAGCATaGTTGTTGAGCAATCCTCCG +
Preference number: 4 (lower is better)
Translates to: VLEDDSLNFLCKSTKIGFSRCPA*LLSNPP
Trigger: CGGAGGATTGCTCAACAACCATGCTGGGCATCTGGA...AAAGCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp TCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCATCCAGATGCCCAGCATaGTTGTTGAGCAATCCTCCG +
Preference number: 4 (lower is better)
Translates to: SMCHTLLSFHEVDANYEASRCPA*LLSNPP
Trigger: CGGAGGATTGCTCAACAACCATGCTGGGCATCTGGA...TGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp GTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCAACTAGACCAATCCCTTGGAGTTaGTGTCAGTCACTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VLSMPLHLLLMKFVFPTRPIPWS*CQSLGH
Trigger: ATGCCCAAGTGACTGACATCAACTCCAAGGGATTGG...TCTAGTTGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR TCA 90 bp TTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCCCAATCCCTTGGAGTTaGTGTCAGTCACTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: FLSMKLMPITKQLNFLFCPIPWS*CQSLGH
Trigger: ATGCCCAAGTGACTGACATCAACTCCAAGGGATTGG...GCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp CTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCCCCAGAAGCGTCTTTaGACACCTGTGTGTCACTCT +
Preference number: 4 (lower is better)
Translates to: LLSFHEVDANYEAVELSVPQKRL*TPVCHS
Trigger: AGAGTGACACACAGGTGTTCAAAGACGCTTCTGGGG...AACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000612663.5
CDS-3UTR TCA 90 bp CTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTAGCAATCCTCCGAAGTaGAAGAGCTTCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: LLSFHEVDANYEAVELSVSNPPK*KSFPNS
Trigger: GGAGTTGGGGAAGCTCTTTCACTTCGGAGGATTGCT...AACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR GCA 90 bp GAGCATAATCTTAATCTTTCATCCTCTGCATACACTCCTATTTGGGTACTTAGCACATGGGAGAAGTCATaGTTGGGGCCACTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: EHNLNLSSSAYTPIWVLSTWEKS*LGPLGE
Trigger: TTCACCTAGTGGCCCCAAGCATGACTTCTCCCATGT...GCTAAGTACCCAAATAGGAGTGTATGCAGAGGATGAAAGATTAAGATTATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR GCA 90 bp AGTAATACTCTCCTGCTCAAAATGCTTTTGATGCCTGAGAAAGAAGTAGGTAGTTCGGGAATGTGGCTGTaGTCATTGACATGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SNTLLLKMLLMPEKEVGSSGMWL*SLTWEK
Trigger: CTTCTCCCATGTCAATGAGCACAGCCACATTCCCGA...ACTACCTACTTCTTTCTCAGGCATCAAAAGCATTTTGAGCAGGAGAGTATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CCA 90 bp TTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCAGCTTTCCTTTCACCTaGAGGACAGGGCTTATGGCA +
Preference number: 4 (lower is better)
Translates to: FLSMKLMPITKQLNFLFCSFPFT*RTGLMA
Trigger: TGCCATAAGCCCTGTCCTCCAGGTGAAAGGAAAGCT...GCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp ATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTGCAGGGCACGCAGTCTaGTTCATCCCCATTGACTGT +
Preference number: 4 (lower is better)
Translates to: ISSILASLTPFFRTKPLTAGHAV*FIPIDC
Trigger: ACAGTCAATGGGGATGAACCAGACTGCGTGCCCTGC...AGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp TCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGTACTCCTTCCCTTCTTaGCAGGGCACGCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SFLISSILASLTPFFRTKYSFPS*QGTQSG
Trigger: ACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTA...CTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp TTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTTATAACTATCTTCACAGTTTATACTCCTTCCCTTCTTaGCAGGGCACGCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: FFRWFQVSASVYNYLHSLYSFPS*QGTQSG
Trigger: ACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTA...TAAACTGTGAAGATAGTTATAAACTGAAGCAGATACCTGGAACCACCTAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp CTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTCTGCACTTGGTATTCTaGGTCCGGGTGCAGTTTATT +
Preference number: 4 (lower is better)
Translates to: LSMKLMPITKQLNFLFCCLHLVF*VRVQFI
Trigger: AATAAACTGCACCCGGACCCAGAATACCAAGTGCAG...ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CCA 90 bp TTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCGTTTACATCTGCACTTaGTATTCTGGGTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: FLSMKLMPITKQLNFLFCVYICT*YSGSGC
Trigger: GCACCCGGACCCAGAATACCAAGTGCAGATGTAAAC...GCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CCA 90 bp GTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGGCTTTGTTTACATCTGCACTTaGTATTCTGGGTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: VLEDDSLNFLCKSTKIGFVYICT*YSGSGC
Trigger: GCACCCGGACCCAGAATACCAAGTGCAGATGTAAAC...AAAGCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CCA 90 bp AGTAATACTCTCCTGCTCAAAATGCTTTTGATGCCTGAGAAAGAAGTAGGTAGTGTTTACATCTGCACTTaGTATTCTGGGTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: SNTLLLKMLLMPEKEVGSVYICT*YSGSGC
Trigger: GCACCCGGACCCAGAATACCAAGTGCAGATGTAAAC...ACTACCTACTTCTTTCTCAGGCATCAAAAGCATTTTGAGCAGGAGAGTATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp CTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTTCCAGATGCCCAGCATaGTTGTTGAGCAATCCTCCG +
Preference number: 4 (lower is better)
Translates to: LDLIYFGFIDTILSNKAFSRCPA*LLSNPP
Trigger: CGGAGGATTGCTCAACAACCATGCTGGGCATCTGGA...AAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTCCAGATGCCCAGCATaGTTGTTGAGCAATCCTCCG +
Preference number: 4 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNSRCPA*LLSNPP
Trigger: CGGAGGATTGCTCAACAACCATGCTGGGCATCTGGA...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp CTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTGTCCAGATGCCCAGCATaGTTGTTGAGCAATCCTCCG +
Preference number: 4 (lower is better)
Translates to: LIYFGFIDTILSNKAFNLSRCPA*LLSNPP
Trigger: CGGAGGATTGCTCAACAACCATGCTGGGCATCTGGA...CAAGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp GCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTGGAAGTTCTTTAGGTaGTTCCAGGTATCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: AKWPACSVTDISAKGHSFWKFFR*FQVSAS
Trigger: TGAAGCAGATACCTGGAACCACCTAAAGAACTTCCA...GAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp AAAATCCTCCATAAATGGAAGTTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTCTCATGGGTGACCTTTaGGTGATTCTCCTACCCAGT +
Preference number: 4 (lower is better)
Translates to: KILHKWKFFRWFQVSASVLMGDL*VILLPS
Trigger: ACTGGGTAGGAGAATCACCCAAAGGTCACCCATGAG...AACTGAAGCAGATACCTGGAACCACCTAAAGAACTTCCATTTATGGAGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp ATTGTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAGCAATCCTCCGAAGTaGAAGAGCTTCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: IVILDLIYFGFIDTILSNSNPPK*KSFPNS
Trigger: GGAGTTGGGGAAGCTCTTTCACTTCGGAGGATTGCT...GTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR TCA 90 bp GTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAAGCAATCCTCCGAAGTaGAAGAGCTTCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: VILDLIYFGFIDTILSNKSNPPK*KSFPNS
Trigger: GGAGTTGGGGAAGCTCTTTCACTTCGGAGGATTGCT...TTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000612663.5
CDS-3UTR TCA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTAGCCCAGCATGGTTGTTaGGCAATCCTCCGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: RQNHEILKIYKYVGSSALAQHGC*AILRSE
Trigger: TTCACTTCGGAGGATTGCTCAACAACCATGCTGGGC...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000652046.1
CDS-3UTR TCA 90 bp GCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTGCCTGTTCAGTAACTaGTATTTCAGCAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: AKWPACSVTDISAKGHSFCLFSN*YFSKRS
Trigger: TGACCTTTTGCTGAAATATCAGTTACTGAACAGGCA...GAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR TCA 90 bp AGAGGTAATTTAGAGGCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAGCAAACATGGGTTCATaGCATGTCACAAAGCTACTT +
Preference number: 4 (lower is better)
Translates to: RGNLEAKWPACSVTDISAANMGS*HVTKLL
Trigger: AAGTAGCTTTGTGACATGTCATGAACCCATGTTTGC...TGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGCCTCTAAATTACCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR TCA 90 bp AAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTTCTTTCAATGTGATCTGTaGGCTCCTTCTGCAAATAGC +
Preference number: 4 (lower is better)
Translates to: KWPACSVTDISAKGHSFFFQCDL*APSANS
Trigger: GCTATTTGCAGAAGGAGCTCACAGATCACATTGAAA...GAAGAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp ATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCAGCAATGCTTTCAATGTaGTCTGTGAGCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: IWVLSMPLHLLLMKFVFPAMLSM*SVSSFC
Trigger: GCAGAAGGAGCTCACAGATCACATTGAAAGCATTGC...TGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR GCA 90 bp AAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTTCAGTTTGGTTTACATCTaGACTTGGTATTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KWPACSVTDISAKGHSFFSLVYI*TWYSGS
Trigger: GGACCCAGAATACCAAGTGCAGATGTAAACCAAACT...GAAGAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR GCA 90 bp TCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGCATGTTCACATTTGGTaGAAGGGTCACAGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: SFHEVDANYEAVELSVLLHVHIW*KGHSVH
Trigger: GTGAACACTGTGACCCTTGCACCAAATGTGAACATG...CAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp AGAGGTAATTTAGAGGCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAGGAACTCAAAGTTCTTaGTCTGAGTTCACCAAAGTG +
Preference number: 4 (lower is better)
Translates to: RGNLEAKWPACSVTDISAGTQSS*SEFTKV
Trigger: CACTTTGGTGAACTCAGAGCAAGAACTTTGAGTTCC...TGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGCCTCTAAATTACCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CCA 90 bp AATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGAGCTTTCCTTTCACCTaGAGGACAGGGCTTATGGCA +
Preference number: 4 (lower is better)
Translates to: NQCVIRFFLSMKLMPITKSFPFT*RTGLMA
Trigger: TGCCATAAGCCCTGTCCTCCAGGTGAAAGGAAAGCT...CTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp CTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTGAGCTTTCCTTTCACCTaGAGGACAGGGCTTATGGCA +
Preference number: 4 (lower is better)
Translates to: LIYFGFIDTILSNKAFNLSFPFT*RTGLMA
Trigger: TGCCATAAGCCCTGTCCTCCAGGTGAAAGGAAAGCT...CAAGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp GTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAATCCAGATGCCCAGCATaGTTGTTGAGCAATCCTCCG +
Preference number: 4 (lower is better)
Translates to: VILDLIYFGFIDTILSNKSRCPA*LLSNPP
Trigger: CGGAGGATTGCTCAACAACCATGCTGGGCATCTGGA...TTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp GCATACACTCCTATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGAGTGGGGTTAGCCTGTaGATAGACATTTGTACTAAC +
Preference number: 4 (lower is better)
Translates to: AYTPIWVLSMPLHLLLMKSGVSL*IDICTN
Trigger: GTTAGTACAAATGTCTATCCACAGGCTAACCCCACT...CTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAATAGGAGTGTATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp CAGGATTTAAAGTTGGAGATTCATGAGAACCTTGGTTTTCCTTTCTGTGCTTTCTTCCATGTTCACATCTaGAGGACAGGGCTTATGGCA +
Preference number: 4 (lower is better)
Translates to: QDLKLEIHENLGFPFCAFFHVHI*RTGLMA
Trigger: TGCCATAAGCCCTGTCCTCCAGATGTGAACATGGAA...GAAAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTTAAATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479522.5
ENST00000484444.5
CDS-3UTR CCA 90 bp ATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTATTGCCACTGTTTCCTaGCATGGTGGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: ISSILASLTPFFRTKPLTIATVS*HGGACL
Trigger: CAGGCATGCACCACCATGCCAGGAAACAGTGGCAAT...AGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612663.5
CDS-3UTR CCA 90 bp AGAGGTAATTTAGAGGCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCACTAGAAATAGAAAACTaGAGAGCAGACAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: RGNLEAKWPACSVTDISALEIEN*RADSTD
Trigger: GTCTGTGCTGTCTGCTCTCCAGTTTTCTATTTCTAG...TGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGCCTCTAAATTACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR CAA 72 bp TCACCAAAGTGGAATAGGGTGTTCTCTAACTTAATCTaGTCTTGCAAAGTAGAACTTGCACTTCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: SPKWNRVFSNLI*SCKVELALLAM
Trigger: CATGGCCAGAAGTGCAAGTTCTACTTTGCAAGACAAGATTAAGTTAGAGAACACCCTATTCCACTTTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTCCAATCCCTTGGAGTTaGTGTCAGTCACTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKIPIPWS*CQSLGH
Trigger: ATGCCCAAGTGACTGACATCAACTCCAAGGGATTGG...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp ATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTCCAATCCCTTGGAGTTaGTGTCAGTCACTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: ISSILASLTPFFRTKPLTPIPWS*CQSLGH
Trigger: ATGCCCAAGTGACTGACATCAACTCCAAGGGATTGG...AGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp TCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCAATCCCTTGGAGTTaGTGTCAGTCACTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SFLISSILASLTPFFRTKPIPWS*CQSLGH
Trigger: ATGCCCAAGTGACTGACATCAACTCCAAGGGATTGG...CTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp TCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGCAATTACGAAGCAGTTaGACTTTCTGTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SFHEVDANYEAVELSVLLQLRSS*TFCSAV
Trigger: CACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTG...CAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp TTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCAAAGCTACTTTCTCTaGGAGCAGTTAGTATCTCCA +
Preference number: 4 (lower is better)
Translates to: FHEVDANYEAVELSVLLCQSYFL*EQLVSP
Trigger: TGGAGATACTAACTGCTCTCAGAGAAAGTAGCTTTG...ACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR TCA 90 bp AACCAGGCTAGAATTTCTAAGGGCAGTCTTGCCTTTTGGTGGACTATTAAGTATCAAAGCTACTTTCTCTaGGAGCAGTTAGTATCTCCA +
Preference number: 4 (lower is better)
Translates to: NQARISKGSLAFWWTIKYQSYFL*EQLVSP
Trigger: TGGAGATACTAACTGCTCTCAGAGAAAGTAGCTTTG...ATACTTAATAGTCCACCAAAAGGCAAGACTGCCCTTAGAAATTCTAGCCTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR GCA 90 bp ATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTCATGTTCACATTTGGTaGAAGGGTCACAGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: MCHTLLSFHEVDANYEAVHVHIW*KGHSVH
Trigger: GTGAACACTGTGACCCTTGCACCAAATGTGAACATG...AACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp AATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGGCCATGTTCACATTTGGTaGAAGGGTCACAGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: NVLEDDSLNFLCKSTKIGHVHIW*KGHSVH
Trigger: GTGAACACTGTGACCCTTGCACCAAATGTGAACATG...GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp AGGGTGTTCTCTAACTTAATCTTGTCTTGCAAAGTAGAACTTGCACTTCTGGCCTTGAACTTTCTGTTCTaGTGTGTCTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: RVFSNLILSCKVELALLALNFLF*CVLDIV
Trigger: GACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA...GGCCAGAAGTGCAAGTTCTACTTTGCAAGACAAGATTAAGTTAGAGAACACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CCA 90 bp CTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTCTGCACTTGGTATTCTaGGTCCGGGTGCAGTTTATT +
Preference number: 4 (lower is better)
Translates to: LDLIYFGFIDTILSNKAFLHLVF*VRVQFI
Trigger: AATAAACTGCACCCGGACCCAGAATACCAAGTGCAG...AAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CCA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGCTGCACTTGGTATTCTaGGTCCGGGTGCAGTTTATT +
Preference number: 4 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKLHLVF*VRVQFI
Trigger: AATAAACTGCACCCGGACCCAGAATACCAAGTGCAG...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CCA 90 bp CTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTGCTGCACTTGGTATTCTaGGTCCGGGTGCAGTTTATT +
Preference number: 4 (lower is better)
Translates to: LIYFGFIDTILSNKAFNLLHLVF*VRVQFI
Trigger: AATAAACTGCACCCGGACCCAGAATACCAAGTGCAG...CAAGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CCA 90 bp ATTGTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACGTTTACATCTGCACTTaGTATTCTGGGTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: IVILDLIYFGFIDTILSNVYICT*YSGSGC
Trigger: GCACCCGGACCCAGAATACCAAGTGCAGATGTAAAC...GTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CCA 90 bp TTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTTTCCATGTTCACATTTaGTGCAAGGGTCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: FHEVDANYEAVELSVLLCFHVHI*CKGHSV
Trigger: AACACTGTGACCCTTGCACCAAATGTGAACATGGAA...ACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CCA 90 bp CGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCCATGTTCACATTTaGTGCAAGGGTCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: RFFLSMKLMPITKQLNFLFHVHI*CKGHSV
Trigger: AACACTGTGACCCTTGCACCAAATGTGAACATGGAA...CAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CCA 90 bp TCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGAATTTAGAGGCAAAGTaGCCTGCCTGTTCAGTAACT +
Preference number: 4 (lower is better)
Translates to: SFHEVDANYEAVELSVLLNLEAK*PACSVT
Trigger: AGTTACTGAACAGGCAGGCCACTTTGCCTCTAAATT...CAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352159.8
ENST00000355740.7
CDS-3UTR CCA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTCCATGTTCACATCTaGAGGACAGGGCTTATGGCA +
Preference number: 4 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNFHVHI*RTGLMA
Trigger: TGCCATAAGCCCTGTCCTCCAGATGTGAACATGGAA...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479522.5
ENST00000484444.5
CDS-3UTR CCA 90 bp GCATACACTCCTATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGCCACATTCCAGTATCTaGAATACGAAACTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: AYTPIWVLSMPLHLLLMKPHSSI*NTKLFD
Trigger: GTCAAACAGTTTCGTATTCCAGATACTGGAATGTGG...CTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAATAGGAGTGTATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CCA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTATGCAGAAAAGAAAGGTaGCCCACTGGCCAGCATGTA +
Preference number: 4 (lower is better)
Translates to: RQNHEILKIYKYVGSSALCRKER*PTGQHV
Trigger: TACATGCTGGCCAGTGGGCCACCTTTCTTTTCTGCA...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp AGGGTGTTCTCTAACTTAATCTTGTCTTGCAAAGTAGAACTTGCACTTCTGGCCAAAGTTGGAGATTCATaGGAACCTTGGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RVFSNLILSCKVELALLAKVGDS*EPWFSF
Trigger: AAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTT...GGCCAGAAGTGCAAGTTCTACTTTGCAAGACAAGATTAAGTTAGAGAACACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp CCACTGTTTCAGGATTTAAAGTTGGAGATTCATGAGAACCTTGGTTTTCCTTTCCAATTACGAAGCAGTTaGACTTTCTGTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: PLFQDLKLEIHENLGFPFQLRSS*TFCSAV
Trigger: CACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTG...GAAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTTAAATCCTGAAACAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
CDS-3UTR TCA 90 bp ATCCACATTCCAGTATCTGGAATACGAAACTGTTTGACGAATAATCATGTGCTGCAATTACGAAGCAGTTaGACTTTCTGTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: IHIPVSGIRNCLTNNHVLQLRSS*TFCSAV
Trigger: CACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTG...CAGCACATGATTATTCGTCAAACAGTTTCGTATTCCAGATACTGGAATGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp AAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTTCTTGAGGATGATAGTCTaGATTTTCTCTGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: KWPACSVTDISAKGHSFFLRMIV*IFSARV
Trigger: TACTCTTGCAGAGAAAATTCAGACTATCATCCTCAA...GAAGAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR TCA 90 bp TTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCTGTGCAAAGGTCTTTaGGGTAGAGCCTTATTTAAA +
Preference number: 4 (lower is better)
Translates to: FHEVDANYEAVELSVLLCLCKGL*GRALFK
Trigger: TTTAAATAAGGCTCTACCTCAAAGACCTTTGCACAG...ACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR TCA 90 bp GTCACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAATTAGGCCATTAAGATaGGCACCAAGGCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: VTSNVLEDDSLNFLCKSTIRPLR*APRQKW
Trigger: CCATTTTTGCCTTGGTGCTCATCTTAATGGCCTAAT...TGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR TCA 90 bp GTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCAACTAGAATTAGGCCATTAAGATaGGCACCAAGGCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: VLSMPLHLLLMKFVFPTRIRPLR*APRQKW
Trigger: CCATTTTTGCCTTGGTGCTCATCTTAATGGCCTAAT...TCTAGTTGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR TCA 90 bp TTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTTATAACTATCTTCACAGTTTATACATGGGACATTATTaGACATTTTCGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FFRWFQVSASVYNYLHSLYMGHY*TFSGVG
Trigger: CCCCACCCCCGAAAATGTTCAATAATGTCCCATGTA...TAAACTGTGAAGATAGTTATAAACTGAAGCAGATACCTGGAACCACCTAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR TCA 90 bp GCATACACTCCTATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGGAATACGAAACTGTTTaGCGAATAATCATGTGCTGT +
Preference number: 4 (lower is better)
Translates to: AYTPIWVLSMPLHLLLMKEYETV*RIIMCC
Trigger: ACAGCACATGATTATTCGTCAAACAGTTTCGTATTC...CTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAATAGGAGTGTATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp GTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCAACTAGAAGACAGCACAGACTATaGTGGCTCAGAAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VLSMPLHLLLMKFVFPTRRQHRL*WLRKEK
Trigger: TTTCTCTTTTCTGAGCCATCATAGTCTGTGCTGTCT...TCTAGTTGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR GCA 90 bp CTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGTATTCTGGGTCCGGGTaGAGTTTATTTCCACTTCTA +
Preference number: 4 (lower is better)
Translates to: LSFHEVDANYEAVELSVLYSGSG*SLFPLL
Trigger: TAGAAGTGGAAATAAACTGCACCCGGACCCAGAATA...CAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp ATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTTATTCTGGGTCCGGGTaGAGTTTATTTCCACTTCTA +
Preference number: 4 (lower is better)
Translates to: MCHTLLSFHEVDANYEAVYSGSG*SLFPLL
Trigger: TAGAAGTGGAAATAAACTGCACCCGGACCCAGAATA...AACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp GTCACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAGTTTGGTTTACATCTaGACTTGGTATTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VTSNVLEDDSLNFLCKSTSLVYI*TWYSGS
Trigger: GGACCCAGAATACCAAGTGCAGATGTAAACCAAACT...TGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp TATGGTAAAATCTCTAGAATTATCAGAGGTAATTTAGAGGCAAAGTGGCCTGCCAGTTTGGTTTACATCTaGACTTGGTATTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: YGKISRIIRGNLEAKWPASLVYI*TWYSGS
Trigger: GGACCCAGAATACCAAGTGCAGATGTAAACCAAACT...GGCAGGCCACTTTGCCTCTAAATTACCTCTGATAATTCTAGAGATTTTACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR GCA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGCATGTTCACATTTGGTaGAAGGGTCACAGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKHVHIW*KGHSVH
Trigger: GTGAACACTGTGACCCTTGCACCAAATGTGAACATG...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp CATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCTTTTGAACTTTCTGTTCTaGTGTGTCTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: HEVDANYEAVELSVLLCLLNFLF*CVLDIV
Trigger: GACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA...AAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp GTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTGAACTTTCTGTTCTaGTGTGTCTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: VIRFFLSMKLMPITKQLNLNFLF*CVLDIV
Trigger: GACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA...GTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTTTGAACTTTCTGTTCTaGTGTGTCTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: FHEVDANYEAVELSVLLCLNFLF*CVLDIV
Trigger: GACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA...ACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTACTGCACTTGGTATTCTaGGTCCGGGTGCAGTTTATT +
Preference number: 4 (lower is better)
Translates to: RQNHEILKIYKYVGSSALLHLVF*VRVQFI
Trigger: AATAAACTGCACCCGGACCCAGAATACCAAGTGCAG...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp CTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGTTCCATGTTCACATTTaGTGCAAGGGTCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: LSFHEVDANYEAVELSVLFHVHI*CKGHSV
Trigger: AACACTGTGACCCTTGCACCAAATGTGAACATGGAA...CAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CCA 90 bp AGTAATACTCTCCTGCTCAAAATGCTTTTGATGCCTGAGAAAGAAGTAGGTAGTTTCCATGTTCACATTTaGTGCAAGGGTCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: SNTLLLKMLLMPEKEVGSFHVHI*CKGHSV
Trigger: AACACTGTGACCCTTGCACCAAATGTGAACATGGAA...ACTACCTACTTCTTTCTCAGGCATCAAAAGCATTTTGAGCAGGAGAGTATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp AAAATCCTCCATAAATGGAAGTTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTAGTGGGGTTAGCCTGTaGATAGACATTTGTACTAAC +
Preference number: 4 (lower is better)
Translates to: KILHKWKFFRWFQVSASVSGVSL*IDICTN
Trigger: GTTAGTACAAATGTCTATCCACAGGCTAACCCCACT...AACTGAAGCAGATACCTGGAACCACCTAAAGAACTTCCATTTATGGAGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp TCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAAATTTAGAGGCAAAGTaGCCTGCCTGTTCAGTAACT +
Preference number: 4 (lower is better)
Translates to: SMCHTLLSFHEVDANYEANLEAK*PACSVT
Trigger: AGTTACTGAACAGGCAGGCCACTTTGCCTCTAAATT...TGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352159.8
ENST00000355740.7
CDS-3UTR CCA 90 bp TCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCATGGAAGTTCTTTAGGTaGTTCCAGGTATCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SMCHTLLSFHEVDANYEAWKFFR*FQVSAS
Trigger: TGAAGCAGATACCTGGAACCACCTAAAGAACTTCCA...TGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355740.7
3UTR CAA 72 bp TTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: FLSMKLMPITKQ*NFLFCCVLDIV
Trigger: GACAATGTCCAAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp CATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCTTAAAGTTGGAGATTCATaGGAACCTTGGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: HEVDANYEAVELSVLLCLKVGDS*EPWFSF
Trigger: AAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTT...AAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR TCA 90 bp AATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAATTACGAAGCAGTTaGACTTTCTGTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: NQCVIRFFLSMKLMPITKQLRSS*TFCSAV
Trigger: CACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTG...CTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp CTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTGCAATTACGAAGCAGTTaGACTTTCTGTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LIYFGFIDTILSNKAFNLQLRSS*TFCSAV
Trigger: CACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTG...CAAGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp TTGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATCAATTACGAAGCAGTTaGACTTTCTGTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LNFLFCCVLDIVILDLIYQLRSS*TFCSAV
Trigger: CACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTG...ATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp CATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCTTTTGAGGATGATAGTCTaGATTTTCTCTGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: HEVDANYEAVELSVLLCLLRMIV*IFSARV
Trigger: TACTCTTGCAGAGAAAATTCAGACTATCATCCTCAA...AAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp CTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTTTGAGGATGATAGTCTaGATTTTCTCTGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: LSMKLMPITKQLNFLFCCLRMIV*IFSARV
Trigger: TACTCTTGCAGAGAAAATTCAGACTATCATCCTCAA...ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp ATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTTGCCTGTTCAGTAACTaGTATTTCAGCAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: MCHTLLSFHEVDANYEAVCLFSN*YFSKRS
Trigger: TGACCTTTTGCTGAAATATCAGTTACTGAACAGGCA...AACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352159.8
ENST00000355740.7
CDS-3UTR TCA 90 bp AAAATCCTCCATAAATGGAAGTTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTCTGTGCAAAGGTCTTTaGGGTAGAGCCTTATTTAAA +
Preference number: 4 (lower is better)
Translates to: KILHKWKFFRWFQVSASVLCKGL*GRALFK
Trigger: TTTAAATAAGGCTCTACCTCAAAGACCTTTGCACAG...AACTGAAGCAGATACCTGGAACCACCTAAAGAACTTCCATTTATGGAGGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR TCA 90 bp TTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTGCAAACATGGGTTCATaGCATGTCACAAAGCTACTT +
Preference number: 4 (lower is better)
Translates to: FLISSILASLTPFFRTKPANMGS*HVTKLL
Trigger: AAGTAGCTTTGTGACATGTCATGAACCCATGTTTGC...AGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR TCA 90 bp TCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAAGAAACTTGGGGGTATaGCAAGAGCAATTCCTAAAT +
Preference number: 4 (lower is better)
Translates to: SMCHTLLSFHEVDANYEARNLGV*QEQFLN
Trigger: ATTTAGGAATTGCTCTTGTCATACCCCCAAGTTTCT...TGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR TCA 90 bp ATCCACATTCCAGTATCTGGAATACGAAACTGTTTGACGAATAATCATGTGCTGAGAAACTTGGGGGTATaGCAAGAGCAATTCCTAAAT +
Preference number: 4 (lower is better)
Translates to: IHIPVSGIRNCLTNNHVLRNLGV*QEQFLN
Trigger: ATTTAGGAATTGCTCTTGTCATACCCCCAAGTTTCT...CAGCACATGATTATTCGTCAAACAGTTTCGTATTCCAGATACTGGAATGTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR GCA 90 bp GAGATCTTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCATATTCTGGGTCCGGGTaGAGTTTATTTCCACTTCTA +
Preference number: 4 (lower is better)
Translates to: EIFNQCVIRFFLSMKLMPYSGSG*SLFPLL
Trigger: TAGAAGTGGAAATAAACTGCACCCGGACCCAGAATA...TGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAAGATCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp TTGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTATTCTGGGTCCGGGTaGAGTTTATTTCCACTTCTA +
Preference number: 4 (lower is better)
Translates to: LNFLFCCVLDIVILDLIYYSGSG*SLFPLL
Trigger: TAGAAGTGGAAATAAACTGCACCCGGACCCAGAATA...ATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp TTGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATAGTTTGGTTTACATCTaGACTTGGTATTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LNFLFCCVLDIVILDLIYSLVYI*TWYSGS
Trigger: GGACCCAGAATACCAAGTGCAGATGTAAACCAAACT...ATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp TTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTTATAACTATCTTCACAGTTTACATGTTCACATTTGGTaGAAGGGTCACAGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: FFRWFQVSASVYNYLHSLHVHIW*KGHSVH
Trigger: GTGAACACTGTGACCCTTGCACCAAATGTGAACATG...TAAACTGTGAAGATAGTTATAAACTGAAGCAGATACCTGGAACCACCTAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR GCA 90 bp CTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCCTTTCTGTGCTTTCTaGATGTTTTCTGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: LSFHEVDANYEAVELSVLPFCAF*MFSVLP
Trigger: AGGAAGTACAGAAAACATGCAGAAAGCACAGAAAGG...CAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCACCTTTCTGTGCTTTCTaGATGTTTTCTGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: SMCHTLLSFHEVDANYEAPFCAF*MFSVLP
Trigger: AGGAAGTACAGAAAACATGCAGAAAGCACAGAAAGG...TGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCCCTTTCTGTGCTTTCTaGATGTTTTCTGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: FLSMKLMPITKQLNFLFCPFCAF*MFSVLP
Trigger: AGGAAGTACAGAAAACATGCAGAAAGCACAGAAAGG...GCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR GCA 90 bp GTCACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACATTGAACTTTCTGTTCTaGTGTGTCTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: VTSNVLEDDSLNFLCKSTLNFLF*CVLDIV
Trigger: GACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA...TGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp CTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTAGTCTGAATTTTCTCTaGAAGAGTACAAAGATTGGC +
Preference number: 4 (lower is better)
Translates to: LSMKLMPITKQLNFLFCCSLNFL*KSTKIG
Trigger: GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACT...ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTAGTCTGAATTTTCTCTaGAAGAGTACAAAGATTGGC +
Preference number: 4 (lower is better)
Translates to: FHEVDANYEAVELSVLLCSLNFL*KSTKIG
Trigger: GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACT...ACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TTGACGAATAATCATGTGCTGTTTGGAAGAGGTCTTCTTGGCAATAGCAACCTAAGTCTGAATTTTCTCTaGAAGAGTACAAAGATTGGC +
Preference number: 4 (lower is better)
Translates to: LTNNHVLFGRGLLGNSNLSLNFL*KSTKIG
Trigger: GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACT...TAGGTTGCTATTGCCAAGAAGACCTCTTCCAAACAGCACATGATTATTCGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR GCA 90 bp TTGACGAATAATCATGTGCTGTTTGGAAGAGGTCTTCTTGGCAATAGCAACCTATTACTAGCATTAAATTaGAGAAAAGAAAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LTNNHVLFGRGLLGNSNLLLALN*RKERWP
Trigger: GGGCCACCTTTCTTTTCTGCAATTTAATGCTAGTAA...TAGGTTGCTATTGCCAAGAAGACCTCTTCCAAACAGCACATGATTATTCGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CCA 90 bp CTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGTGTTCTGCTGTGTCTTaGACATTGTCATTCTTGATC +
Preference number: 4 (lower is better)
Translates to: LSFHEVDANYEAVELSVLCSAVS*TLSFLI
Trigger: GATCAAGAATGACAATGTCCAAGACACAGCAGAACA...CAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp ATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCATGTTCTGCTGTGTCTTaGACATTGTCATTCTTGATC +
Preference number: 4 (lower is better)
Translates to: IWVLSMPLHLLLMKFVFPCSAVS*TLSFLI
Trigger: GATCAAGAATGACAATGTCCAAGACACAGCAGAACA...TGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp TTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCAGTGGGGTTAGCCTGTaGATAGACATTTGTACTAAC +
Preference number: 4 (lower is better)
Translates to: FFLSMKLMPITKQLNFLFSGVSL*IDICTN
Trigger: GTTAGTACAAATGTCTATCCACAGGCTAACCCCACT...GAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352159.8
ENST00000355740.7
CDS-3UTR CCA 90 bp ATGTGCTGTTTGGAAGAGGTCTTCTTGGCAATAGCAACCTATGGAAATAATTATAATTTAGAGGCAAAGTaGCCTGCCTGTTCAGTAACT +
Preference number: 4 (lower is better)
Translates to: MCCLEEVFLAIATYGNNYNLEAK*PACSVT
Trigger: AGTTACTGAACAGGCAGGCCACTTTGCCTCTAAATT...ATAATTATTTCCATAGGTTGCTATTGCCAAGAAGACCTCTTCCAAACAGCACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
3UTR CAA 72 bp ACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTaGATCTCATCTATTTTGGCTTCATTGACACCATTC +
Preference number: 4 (lower is better)
Translates to: TFCSAVSWTLSF*ISSILASLTPF
Trigger: GAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
3UTR CAA 72 bp CTTATCCACATTCCAGTATCTGGAATACGAAACTGTTaGACGAATAATCATGTGCTGTTTGGAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LIHIPVSGIRNC*TNNHVLFGRGL
Trigger: AAGACCTCTTCCAAACAGCACATGATTATTCGTCAAACAGTTTCGTATTCCAGATACTGGAATGTGGATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR TCA 90 bp TTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCAAAGTTGGAGATTCATaGGAACCTTGGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FLSMKLMPITKQLNFLFCKVGDS*EPWFSF
Trigger: AAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTT...GCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR TCA 90 bp GTCACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAAGTTGGAGATTCATaGGAACCTTGGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VTSNVLEDDSLNFLCKSTKVGDS*EPWFSF
Trigger: AAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTT...TGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR TCA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTACAATTACGAAGCAGTTaGACTTTCTGTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RQNHEILKIYKYVGSSALQLRSS*TFCSAV
Trigger: CACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTG...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000652046.1
CDS-3UTR TCA 90 bp ATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTGCCTGTTCAGTAACTaGTATTTCAGCAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ILDLIYFGFIDTILSNKACLFSN*YFSKRS
Trigger: TGACCTTTTGCTGAAATATCAGTTACTGAACAGGCA...GGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352159.8
ENST00000355740.7
CDS-3UTR GCA 90 bp TTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTTATAACTATCTTCACAGTTTATATTCTGGGTCCGGGTaGAGTTTATTTCCACTTCTA +
Preference number: 4 (lower is better)
Translates to: FFRWFQVSASVYNYLHSLYSGSG*SLFPLL
Trigger: TAGAAGTGGAAATAAACTGCACCCGGACCCAGAATA...TAAACTGTGAAGATAGTTATAAACTGAAGCAGATACCTGGAACCACCTAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR GCA 90 bp ATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTAGTTTGGTTTACATCTaGACTTGGTATTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ISSILASLTPFFRTKPLTSLVYI*TWYSGS
Trigger: GGACCCAGAATACCAAGTGCAGATGTAAACCAAACT...AGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR GCA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGCCTTTCTGTGCTTTCTaGATGTTTTCTGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKPFCAF*MFSVLP
Trigger: AGGAAGTACAGAAAACATGCAGAAAGCACAGAAAGG...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTTGAACTTTCTGTTCTaGTGTGTCTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: FFLSMKLMPITKQLNFLFLNFLF*CVLDIV
Trigger: GACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA...GAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGTTGAACTTTCTGTTCTaGTGTGTCTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKLNFLF*CVLDIV
Trigger: GACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp CTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTGTTGAACTTTCTGTTCTaGTGTGTCTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: LIYFGFIDTILSNKAFNLLNFLF*CVLDIV
Trigger: GACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA...CAAGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp AATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGTTGAACTTTCTGTTCTaGTGTGTCTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: NQCVIRFFLSMKLMPITKLNFLF*CVLDIV
Trigger: GACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA...CTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAAAGTCTGAATTTTCTCTaGAAGAGTACAAAGATTGGC +
Preference number: 4 (lower is better)
Translates to: CHTLLSFHEVDANYEAVESLNFL*KSTKIG
Trigger: GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACT...TTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp ATGTGCTGTTTGGAAGAGGTCTTCTTGGCAATAGCAACCTATGGAAATAATTATTTGCAAAGTAGAACTTaGACTTCTGGCCATGAAGAA +
Preference number: 4 (lower is better)
Translates to: MCCLEEVFLAIATYGNNYLQSRT*TSGHEE
Trigger: TTCTTCATGGCCAGAAGTGCAAGTTCTACTTTGCAA...ATAATTATTTCCATAGGTTGCTATTGCCAAGAAGACCTCTTCCAAACAGCACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CCA 90 bp CAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTACATCTTCTGCATTTaGAAGAAAAATGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: QCVIRFFLSMKLMPITKQYIFCI*KKNGLC
Trigger: ACAAAGCCCATTTTTCTTCCAAATGCAGAAGATGTA...CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp AACCAGGCTAGAATTTCTAAGGGCAGTCTTGCCTTTTGGTGGACTATTAAGTATTACATCTTCTGCATTTaGAAGAAAAATGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: NQARISKGSLAFWWTIKYYIFCI*KKNGLC
Trigger: ACAAAGCCCATTTTTCTTCCAAATGCAGAAGATGTA...ATACTTAATAGTCCACCAAAAGGCAAGACTGCCCTTAGAAATTCTAGCCTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTTTCCATGTTCACATTTaGTGCAAGGGTCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKIFHVHI*CKGHSV
Trigger: AACACTGTGACCCTTGCACCAAATGTGAACATGGAA...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CCA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTGTTCTGCTGTGTCTTaGACATTGTCATTCTTGATC +
Preference number: 4 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNCSAVS*TLSFLI
Trigger: GATCAAGAATGACAATGTCCAAGACACAGCAGAACA...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp AATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGTGTTCTGCTGTGTCTTaGACATTGTCATTCTTGATC +
Preference number: 4 (lower is better)
Translates to: NQCVIRFFLSMKLMPITKCSAVS*TLSFLI
Trigger: GATCAAGAATGACAATGTCCAAGACACAGCAGAACA...CTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGTGTTCTGCTGTGTCTTaGACATTGTCATTCTTGATC +
Preference number: 4 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKCSAVS*TLSFLI
Trigger: GATCAAGAATGACAATGTCCAAGACACAGCAGAACA...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp ATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCAGGCAGTCTTGCCTTTTaGTGGACTATTAAGTATTTT +
Preference number: 4 (lower is better)
Translates to: IWVLSMPLHLLLMKFVFPGSLAF*WTIKYF
Trigger: AAAATACTTAATAGTCCACCAAAAGGCAAGACTGCC...TGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR TCA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACAAAGTTGGAGATTCATaGGAACCTTGGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNKVGDS*EPWFSF
Trigger: AAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTT...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR TCA 90 bp CTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTAAAGTTGGAGATTCATaGGAACCTTGGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLSFHEVDANYEAVELSVKVGDS*EPWFSF
Trigger: AAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTT...AACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR TCA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTGAGGATGATAGTCTaGATTTTCTCTGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNLRMIV*IFSARV
Trigger: TACTCTTGCAGAGAAAATTCAGACTATCATCCTCAA...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp GAGATCTTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCATTGAGGATGATAGTCTaGATTTTCTCTGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: EIFNQCVIRFFLSMKLMPLRMIV*IFSARV
Trigger: TACTCTTGCAGAGAAAATTCAGACTATCATCCTCAA...TGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAAGATCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGTTGAGGATGATAGTCTaGATTTTCTCTGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKLRMIV*IFSARV
Trigger: TACTCTTGCAGAGAAAATTCAGACTATCATCCTCAA...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp GTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAACCTTTCTGTGCTTTCTaGATGTTTTCTGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: VILDLIYFGFIDTILSNKPFCAF*MFSVLP
Trigger: AGGAAGTACAGAAAACATGCAGAAAGCACAGAAAGG...TTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR GCA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTCCTTTCTGTGCTTTCTaGATGTTTTCTGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKIPFCAF*MFSVLP
Trigger: AGGAAGTACAGAAAACATGCAGAAAGCACAGAAAGG...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGTTGAACTTTCTGTTCTaGTGTGTCTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: SFLISSILASLTPFFRTKLNFLF*CVLDIV
Trigger: GACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA...CTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTAGTCTGAATTTTCTCTaGAAGAGTACAAAGATTGGC +
Preference number: 4 (lower is better)
Translates to: FLISSILASLTPFFRTKPSLNFL*KSTKIG
Trigger: GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACT...AGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCAGTCTGAATTTTCTCTaGAAGAGTACAAAGATTGGC +
Preference number: 4 (lower is better)
Translates to: FFLSMKLMPITKQLNFLFSLNFL*KSTKIG
Trigger: GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACT...GAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp ATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCAGTCTGAATTTTCTCTaGAAGAGTACAAAGATTGGC +
Preference number: 4 (lower is better)
Translates to: ILDLIYFGFIDTILSNKASLNFL*KSTKIG
Trigger: GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACT...GGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACAGTCTGAATTTTCTCTaGAAGAGTACAAAGATTGGC +
Preference number: 4 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNSLNFL*KSTKIG
Trigger: GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACT...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TTGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATAGTCTGAATTTTCTCTaGAAGAGTACAAAGATTGGC +
Preference number: 4 (lower is better)
Translates to: LNFLFCCVLDIVILDLIYSLNFL*KSTKIG
Trigger: GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACT...ATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTAATCACTCAGACTTTCTaGCTAAAGACACTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RQNHEILKIYKYVGSSALITQTF*LKTLSR
Trigger: TCTGGAAAGTGTCTTTAGGCAGAAAGTCTGAGTGAT...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CCA 90 bp AAAATCCTCCATAAATGGAAGTTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTTACATCTTCTGCATTTaGAAGAAAAATGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: KILHKWKFFRWFQVSASVYIFCI*KKNGLC
Trigger: ACAAAGCCCATTTTTCTTCCAAATGCAGAAGATGTA...AACTGAAGCAGATACCTGGAACCACCTAAAGAACTTCCATTTATGGAGGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CCA 90 bp ATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTTACATCTTCTGCATTTaGAAGAAAAATGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: MCHTLLSFHEVDANYEAVYIFCI*KKNGLC
Trigger: ACAAAGCCCATTTTTCTTCCAAATGCAGAAGATGTA...AACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp ATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTGTTCTGCTGTGTCTTaGACATTGTCATTCTTGATC +
Preference number: 4 (lower is better)
Translates to: ISSILASLTPFFRTKPLTCSAVS*TLSFLI
Trigger: GATCAAGAATGACAATGTCCAAGACACAGCAGAACA...AGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTATGTTCTGCTGTGTCTTaGACATTGTCATTCTTGATC +
Preference number: 4 (lower is better)
Translates to: RQNHEILKIYKYVGSSALCSAVS*TLSFLI
Trigger: GATCAAGAATGACAATGTCCAAGACACAGCAGAACA...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000652046.1
CDS-3UTR CCA 90 bp GTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAATGTTCTGCTGTGTCTTaGACATTGTCATTCTTGATC +
Preference number: 4 (lower is better)
Translates to: VILDLIYFGFIDTILSNKCSAVS*TLSFLI
Trigger: GATCAAGAATGACAATGTCCAAGACACAGCAGAACA...TTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp AACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTTTTGTTCTGCTGTGTCTTaGACATTGTCATTCTTGATC +
Preference number: 4 (lower is better)
Translates to: NFLFCCVLDIVILDLIYFCSAVS*TLSFLI
Trigger: GATCAAGAATGACAATGTCCAAGACACAGCAGAACA...AAAATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp TTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGTGTTCTGCTGTGTCTTaGACATTGTCATTCTTGATC +
Preference number: 4 (lower is better)
Translates to: FNQCVIRFFLSMKLMPITCSAVS*TLSFLI
Trigger: GATCAAGAATGACAATGTCCAAGACACAGCAGAACA...CGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp AAAATCCTCCATAAATGGAAGTTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTAAAATCCTCCATAAATaGAAGTTCTTTAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: KILHKWKFFRWFQVSASVKILHK*KFFRWF
Trigger: GAACCACCTAAAGAACTTCCATTTATGGAGGATTTT...AACTGAAGCAGATACCTGGAACCACCTAAAGAACTTCCATTTATGGAGGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR TCA 90 bp GTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAAAAGTTGGAGATTCATaGGAACCTTGGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VILDLIYFGFIDTILSNKKVGDS*EPWFSF
Trigger: AAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTT...TTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGAC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR TCA 90 bp ATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTTGAGGATGATAGTCTaGATTTTCTCTGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: ISSILASLTPFFRTKPLTLRMIV*IFSARV
Trigger: TACTCTTGCAGAGAAAATTCAGACTATCATCCTCAA...AGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp AACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTTTTTGAGGATGATAGTCTaGATTTTCTCTGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: NFLFCCVLDIVILDLIYFLRMIV*IFSARV
Trigger: TACTCTTGCAGAGAAAATTCAGACTATCATCCTCAA...AAAATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR TCA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTTTGAGGATGATAGTCTaGATTTTCTCTGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKILRMIV*IFSARV
Trigger: TACTCTTGCAGAGAAAATTCAGACTATCATCCTCAA...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR GCA 90 bp TTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAGTCTGAATTTTCTCTaGAAGAGTACAAAGATTGGC +
Preference number: 4 (lower is better)
Translates to: FNQCVIRFFLSMKLMPITSLNFL*KSTKIG
Trigger: GCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACT...CGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp ATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTACATCTTCTGCATTTaGAAGAAAAATGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: ILDLIYFGFIDTILSNKAYIFCI*KKNGLC
Trigger: ACAAAGCCCATTTTTCTTCCAAATGCAGAAGATGTA...GGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp ATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCAAAATCCTCCATAAATaGAAGTTCTTTAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: ILDLIYFGFIDTILSNKAKILHK*KFFRWF
Trigger: GAACCACCTAAAGAACTTCCATTTATGGAGGATTTT...GGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR CCA 90 bp TTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGTACATCTTCTGCATTTaGAAGAAAAATGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: FNQCVIRFFLSMKLMPITYIFCI*KKNGLC
Trigger: ACAAAGCCCATTTTTCTTCCAAATGCAGAAGATGTA...CGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp TCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGTACATCTTCTGCATTTaGAAGAAAAATGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SFLISSILASLTPFFRTKYIFCI*KKNGLC
Trigger: ACAAAGCCCATTTTTCTTCCAAATGCAGAAGATGTA...CTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CCA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTTACATCTTCTGCATTTaGAAGAAAAATGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKIYIFCI*KKNGLC
Trigger: ACAAAGCCCATTTTTCTTCCAAATGCAGAAGATGTA...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS CCA 90 bp CCGCGGGGCGGCGCGCACTCACCCACCCGCGCCGGAGCGGACCTTTaGCTTGGCTTGTCAGGGCTTGTCCAGGAGTTCCGCTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PRGGAHSPTRAGADL*LGLSGLVQEFRSSL
Trigger: GAGAGAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTGAGTGCGCGCCGCCCCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313771.9
CDS GCA 90 bp CCCACCTCAACGTGGAGCGCAGTGGTCTCCGAGGAGCGCCGGAGCTaGCCCGCCTGCCCAGCGGGGTCAGCACTTCGCATCAAGGCCCAA +
Preference number: 5 (lower is better)
Translates to: PTSTWSAVVSEERRS*PACPAGSALRIKAQ
Trigger: TTGGGCCTTGATGCGAAGTGCTGACCCCGCTGGGCAGGCGGGGCAGCTCCGGCGCTCCTCGGAGACCACTGCGCTCCACGTTGAGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460510.5
CDS CCA 90 bp GACTTCCGCTTCAATTCCTGTCCGCACCCCACGCCCACCTCAACGTaGAGCGCAGTGGTCTCCGAGGAGCGCCGGAGCTGCCCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: DFRFNSCPHPTPTST*SAVVSEERRSCPAC
Trigger: GCAGGCGGGGCAGCTCCGGCGCTCCTCGGAGACCACTGCGCTCCACGTTGAGGTGGGCGTGGGGTGCGGACAGGAATTGAAGCGGAAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460510.5
CDS GCA 90 bp AGAACCTCAACGTGGAGCGCAGTGGTCTCCGAGGAGCGCCGGAGCTaGCCCGCCTGCCCAGCGGGGTCAGCACTTCGCATCAAGGCCCAA +
Preference number: 5 (lower is better)
Translates to: RTSTWSAVVSEERRS*PACPAGSALRIKAQ
Trigger: TTGGGCCTTGATGCGAAGTGCTGACCCCGCTGGGCAGGCGGGGCAGCTCCGGCGCTCCTCGGAGACCACTGCGCTCCACGTTGAGGTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477270.5
CDS CCA 90 bp GCAACAGACGTAAGAACCCACCCGCGCCGGAGCGGACCTTTGGCTTaGCTTGTCAGGGCTTGTCCAGGAGTTCCGCTCCTCTCTCCAACC +
Preference number: 5 (lower is better)
Translates to: ATDVRTHPRRSGPLA*LVRACPGVPLLSPT
Trigger: GGTTGGAGAGAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTTCTTACGTCTGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460510.5
CDS-3UTR CAA 90 bp GGAATGTGGCTGTGCTCATTGACATGGGAGAAGTCATGCTTGGGGCCACTAGGTTGGGAGAAGTCATGCTaGGGGCCACTAGGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: GMWLCSLTWEKSCLGPLGWEKSC*GPLGEA
Trigger: GGCTTCACCTAGTGGCCCCAAGCATGACTTCTCCCA...ACCTAGTGGCCCCAAGCATGACTTCTCCCATGTCAATGAGCACAGCCACATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS CCA 90 bp GGCTTTGTCTGTGTACTCCTTCCCTTCTTGGCAGGGCACGCAGTCTaGTTCATCCCCATTGACTGTGCAGTCCCTAGCTTTCCTTTCACC +
Preference number: 5 (lower is better)
Translates to: GFVCVLLPFLAGHAV*FIPIDCAVPSFPFT
Trigger: GGTGAAAGGAAAGCTAGGGACTGCACAGTCAATGGGGATGAACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTACACAGACAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000313771.9
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000357339.6
ENST00000371857.7
ENST00000460510.5
ENST00000466081.5
ENST00000477270.5
ENST00000487314.1
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
ENST00000640140.1
ENST00000640681.1
ENST00000652046.1
CDS-3UTR CAA 90 bp GATTCTGGACCGTGGGGTCACCTCAACTCGGGAATGTGGCTGTGCTCATTGACACCTTCCTCTTTGCACTaGGTGTTGCTGGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: DSGPWGHLNSGMWLCSLTPSSLH*VLLVSV
Trigger: CACACTCACCAGCAACACCAAGTGCAAAGAGGAAGG...TGTCAATGAGCACAGCCACATTCCCGAGTTGAGGTGACCCCACGGTCCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp CCTTTGGGTGATTCTCCTACCCAGTATGCCCACCACAAAGAGAACCAGGTTCACTCTGGTTCATCCCCATaGACTGTGCAGTCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: PLGDSPTQYAHHKENQVHSGSSP*TVQSLA
Trigger: AGCTAGGGACTGCACAGTCAATGGGGATGAACCAGA...GTGAACCTGGTTCTCTTTGTGGTGGGCATACTGGGTAGGAGAATCACCCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp TCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGGTACTCCTTCCCTTCTaGGCAGGGCACGCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: SFHEVDANYEAVELSVLLVLLPF*AGHAVW
Trigger: CCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTAC...CAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp ATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCATGGGGAACGCCCGGGTaGGGGAGGGCTCCATTGATT +
Preference number: 5 (lower is better)
Translates to: IWVLSMPLHLLLMKFVFPWGTPG*GRAPLI
Trigger: AATCAATGGAGCCCTCCCCAACCCGGGCGTTCCCCA...TGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR CAA 90 bp GATTCTGGACCGTGGGGTCACCTCAACTCGGGAATGTGGCTGTGCTCATTGACACTGCTCAAAATGCTTTaGATGCCTGAGAAAGAAGTA +
Preference number: 5 (lower is better)
Translates to: DSGPWGHLNSGMWLCSLTLLKML*MPEKEV
Trigger: TACTTCTTTCTCAGGCATCAAAAGCATTTTGAGCAG...TGTCAATGAGCACAGCCACATTCCCGAGTTGAGGTGACCCCACGGTCCAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS TCA 90 bp CAGTTTGGATCTCAGGTTCTTCAAACCACACTAGAAACAGCACCATaGATGATAGAAGCCAGGTGTTCTAAGGTGAACAGGGCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: QFGSQVLQTTLETAP*MIEARCSKVNRASH
Trigger: GTGGGAGGCCCTGTTCACCTTAGAACACCTGGCTTCTATCATTCATGGTGCTGTTTCTAGTGTGGTTTGAAGAACCTGAGATCCAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640140.1
CDS-3UTR CAA 90 bp ATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCAGTACTCCTTCCCTTCTaGGCAGGGCACGCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: IWVLSMPLHLLLMKFVFPVLLPF*AGHAVW
Trigger: CCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTAC...TGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp ATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGTACTCCTTCCCTTCTaGGCAGGGCACGCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: MCHTLLSFHEVDANYEAVVLLPF*AGHAVW
Trigger: CCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTAC...AACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCAACTAGAGTACTCCTTCCCTTCTaGGCAGGGCACGCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: VLSMPLHLLLMKFVFPTRVLLPF*AGHAVW
Trigger: CCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTAC...TCTAGTTGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp GATTCTGGACCGTGGGGTCACCTCAACTCGGGAATGTGGCTGTGCTCATTGACATGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: DSGPWGHLNSGMWLCSLTWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...TGTCAATGAGCACAGCCACATTCCCGAGTTGAGGTGACCCCACGGTCCAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp GCATACACTCCTATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGACCTGTGTGTCACTCTaGCGCGAGATCAGAGACGAG +
Preference number: 5 (lower is better)
Translates to: AYTPIWVLSMPLHLLLMKTCVSL*REIRDE
Trigger: CTCGTCTCTGATCTCGCGCAAGAGTGACACACAGGT...CTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAATAGGAGTGTATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR CAA 90 bp GGAATGTGGCTGTGCTCATTGACATGGGAGAAGTCATGCTTGGGGCCACTAGGTCCACTGCATTTACTCTaGATGAAGTTTGTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: GMWLCSLTWEKSCLGPLGPLHLL*MKFVFP
Trigger: TGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGG...ACCTAGTGGCCCCAAGCATGACTTCTCCCATGTCAATGAGCACAGCCACATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS GCA 90 bp CTTAACCACTGCTTCGGTGCTGACTTATTTCCTACGTCTGAGAACTaGCAGAAAATGAGCAATATCTGTTCTGAAGGCTGCAGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: LNHCFGADLFPTSEN*QKMSNICSEGCRLS
Trigger: AGAGAGCCTGCAGCCTTCAGAACAGATATTGCTCATTTTCTGGCAGTTCTCAGACGTAGGAAATAAGTCAGCACCGAAGCAGTGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313771.9
CDS CCA 90 bp TGTGCCCTTATGACAAACTTTAAGAGCAATCTCTTTGCTCAGGCTTaGATACTGAACCCATGCCTGGTAAAGGCTGTTTCTCTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: CALMTNFKSNLFAQA*ILNPCLVKAVSLQG
Trigger: TCCCTGCAGAGAAACAGCCTTTACCAGGCATGGGTTCAGTATCCAAGCCTGAGCAAAGAGATTGCTCTTAAAGTTTGTCATAAGGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640250.1
CDS-3UTR CAA 90 bp CTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTGTACTCCTTCCCTTCTaGGCAGGGCACGCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: LLSFHEVDANYEAVELSVVLLPF*AGHAVW
Trigger: CCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTAC...AACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATGTACTCCTTCCCTTCTaGGCAGGGCACGCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: LNFLFCCVLDIVILDLIYVLLPF*AGHAVW
Trigger: CCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTAC...ATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTTCCCTTCCTCTTTGCACTaGGTGTTGCTGGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: KWPACSVTDISAKGHSFFPSSLH*VLLVSV
Trigger: CACACTCACCAGCAACACCAAGTGCAAAGAGGAAGG...GAAGAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp TCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCAGATGCCCAGCATGGTaGTTGAGCAATCCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: SMKLMPITKQLNFLFCCVRCPAW*LSNPPK
Trigger: CTTCGGAGGATTGCTCAACAACCATGCTGGGCATCT...GACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GGAATGTGGCTGTGCTCATTGACATGGGAGAAGTCATGCTTGGGGCCACTAGGTACTCTAGACCAAGCTTaGGATTTCATTTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: GMWLCSLTWEKSCLGPLGTLDQA*DFISEV
Trigger: AACTTCAGAAATGAAATCCAAAGCTTGGTCTAGAGT...ACCTAGTGGCCCCAAGCATGACTTCTCCCATGTCAATGAGCACAGCCACATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp GCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCATGTGGCTGTGCTCATaGACATGGGAGAAGTCATGC +
Preference number: 5 (lower is better)
Translates to: AKWPACSVTDISAKGHSFMWLCS*TWEKSC
Trigger: GCATGACTTCTCCCATGTCAATGAGCACAGCCACAT...GAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp TCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCTCCAATCCCTTGGAGTaGATGTCAGTCACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: SMKLMPITKQLNFLFCCVSNPLE*MSVTWA
Trigger: TGCCCAAGTGACTGACATCAACTCCAAGGGATTGGA...GACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGGTACTCCTTCCCTTCTaGGCAGGGCACGCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: FNQCVIRFFLSMKLMPITVLLPF*AGHAVW
Trigger: CCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTAC...CGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGTACTCCTTCCCTTCTaGGCAGGGCACGCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKIVLLPF*AGHAVW
Trigger: CCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTAC...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTGGTTTACATCTGCACTaGGTATTCTGGGTCCGGGTG +
Preference number: 5 (lower is better)
Translates to: FHEVDANYEAVELSVLLCGLHLH*VFWVRV
Trigger: CACCCGGACCCAGAATACCAAGTGCAGATGTAAACC...ACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CAA 90 bp CAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGCTGGATCCTTCCTCTTaGCACTTGGTGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: QCVIRFFLSMKLMPITKQLDPSS*HLVLLV
Trigger: CACCAGCAACACCAAGTGCAAAGAGGAAGGATCCAG...CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AACCAGGCTAGAATTTCTAAGGGCAGTCTTGCCTTTTGGTGGACTATTAAGTATCTGGATCCTTCCTCTTaGCACTTGGTGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: NQARISKGSLAFWWTIKYLDPSS*HLVLLV
Trigger: CACCAGCAACACCAAGTGCAAAGAGGAAGGATCCAG...ATACTTAATAGTCCACCAAAAGGCAAGACTGCCCTTAGAAATTCTAGCCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp CGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTCCCCAGAAGCGTCTTaGAACACCTGTGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: RFFLSMKLMPITKQLNFLSPEAS*NTCVSL
Trigger: GAGTGACACACAGGTGTTCAAAGACGCTTCTGGGGA...CAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CAA 90 bp CATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCTTAGATGCCCAGCATGGTaGTTGAGCAATCCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: HEVDANYEAVELSVLLCLRCPAW*LSNPPK
Trigger: CTTCGGAGGATTGCTCAACAACCATGCTGGGCATCT...AAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACGTCCCAGGGTCACAGTaGAGGCAGGAGGATCACTTG +
Preference number: 5 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNVPGSQ*RQEDHL
Trigger: CAAGTGATCCTCCTGCCTCAACTGTGACCCTGGGAC...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612663.5
CDS GCA 90 bp AATCTAGCAACAGACGTAAGAACCCAAAATTGGCAGTATCTGCTGTaGACAGGCAAAGACAATGTGAGGGCTCCACTGTCTTTCAGATTT +
Preference number: 5 (lower is better)
Translates to: NLATDVRTQNWQYLL*TGKDNVRAPLSFRF
Trigger: AAATCTGAAAGACAGTGGAGCCCTCACATTGTCTTTGCCTGTGCACAGCAGATACTGCCAATTTTGGGTTCTTACGTCTGTTGCTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640140.1
CDS-3UTR CAA 90 bp AACCACATCACCAAGTACAAAGACTTCTCCACTGTCTTCCTCCCAAAGGAACTCGTTGATGTCAGTCACTaGGGCATTAACACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: NHITKYKDFSTVFLPKELVDVSH*GINTFG
Trigger: TCCAAAAGTGTTAATGCCCAAGTGACTGACATCAAC...GAGTTCCTTTGGGAGGAAGACAGTGGAGAAGTCTTTGTACTTGGTGATGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp CGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTCCAATCCCTTGGAGTaGATGTCAGTCACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: RFFLSMKLMPITKQLNFLSNPLE*MSVTWA
Trigger: TGCCCAAGTGACTGACATCAACTCCAAGGGATTGGA...CAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTCCAATCCCTTGGAGTaGATGTCAGTCACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: QCVIRFFLSMKLMPITKQSNPLE*MSVTWA
Trigger: TGCCCAAGTGACTGACATCAACTCCAAGGGATTGGA...CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTCTGGTTCATCCCCATaGACTGTGCAGTCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: FLSMKLMPITKQLNFLFCSGSSP*TVQSLA
Trigger: AGCTAGGGACTGCACAGTCAATGGGGATGAACCAGA...GCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCGGTTTACATCTGCACTaGGTATTCTGGGTCCGGGTG +
Preference number: 5 (lower is better)
Translates to: FLSMKLMPITKQLNFLFCGLHLH*VFWVRV
Trigger: CACCCGGACCCAGAATACCAAGTGCAGATGTAAACC...GCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CAA 90 bp GTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGGCTTTGGTTTACATCTGCACTaGGTATTCTGGGTCCGGGTG +
Preference number: 5 (lower is better)
Translates to: VLEDDSLNFLCKSTKIGFGLHLH*VFWVRV
Trigger: CACCCGGACCCAGAATACCAAGTGCAGATGTAAACC...AAAGCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CAA 90 bp ATCCACATTCCAGTATCTGGAATACGAAACTGTTTGACGAATAATCATGTGCTGGGTTTACATCTGCACTaGGTATTCTGGGTCCGGGTG +
Preference number: 5 (lower is better)
Translates to: IHIPVSGIRNCLTNNHVLGLHLH*VFWVRV
Trigger: CACCCGGACCCAGAATACCAAGTGCAGATGTAAACC...CAGCACATGATTATTCGTCAAACAGTTTCGTATTCCAGATACTGGAATGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp GTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTCTTTGCACTTGGTGTaGCTGGTGAGTGTGCATTCC +
Preference number: 5 (lower is better)
Translates to: VIRFFLSMKLMPITKQLNSLHLV*LVSVHS
Trigger: GGAATGCACACTCACCAGCAACACCAAGTGCAAAGA...GTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CAGGATTTAAAGTTGGAGATTCATGAGAACCTTGGTTTTCCTTTCTGTGCTTTCCCTTCCTCTTTGCACTaGGTGTTGCTGGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: QDLKLEIHENLGFPFCAFPSSLH*VLLVSV
Trigger: CACACTCACCAGCAACACCAAGTGCAAAGAGGAAGG...GAAAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTTAAATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484444.5
ENST00000488877.5
CDS-3UTR CAA 90 bp CTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGGATCCTTCCTCTTaGCACTTGGTGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LSFHEVDANYEAVELSVLLDPSS*HLVLLV
Trigger: CACCAGCAACACCAAGTGCAAAGAGGAAGGATCCAG...CAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp ATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCACTGGATCCTTCCTCTTaGCACTTGGTGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: IWVLSMPLHLLLMKFVFPLDPSS*HLVLLV
Trigger: CACCAGCAACACCAAGTGCAAAGAGGAAGGATCCAG...TGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp GTCACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACACTGGATCCTTCCTCTTaGCACTTGGTGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: VTSNVLEDDSLNFLCKSTLDPSS*HLVLLV
Trigger: CACCAGCAACACCAAGTGCAAAGAGGAAGGATCCAG...TGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCCTGGATCCTTCCTCTTaGCACTTGGTGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: FLSMKLMPITKQLNFLFCLDPSS*HLVLLV
Trigger: CACCAGCAACACCAAGTGCAAAGAGGAAGGATCCAG...GCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp ATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTGGGGAGGGCTCCATaGATTCAGCAACTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: ILDLIYFGFIDTILSNKALGRAP*IQQLGL
Trigger: CAGGCCAAGTTGCTGAATCAATGGAGCCCTCCCCAA...GGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR CAA 90 bp TTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTACCTGTGTGTCACTCTaGCGCGAGATCAGAGACGAG +
Preference number: 5 (lower is better)
Translates to: FLISSILASLTPFFRTKPTCVSL*REIRDE
Trigger: CTCGTCTCTGATCTCGCGCAAGAGTGACACACAGGT...AGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CAA 90 bp CCACTGTTTCAGGATTTAAAGTTGGAGATTCATGAGAACCTTGGTTTTCCTTTCAGATGCCCAGCATGGTaGTTGAGCAATCCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: PLFQDLKLEIHENLGFPFRCPAW*LSNPPK
Trigger: CTTCGGAGGATTGCTCAACAACCATGCTGGGCATCT...GAAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTTAAATCCTGAAACAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
CDS-3UTR CAA 90 bp ATTTGGGTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCAAGATGCCCAGCATGGTaGTTGAGCAATCCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: IWVLSMPLHLLLMKFVFPRCPAW*LSNPPK
Trigger: CTTCGGAGGATTGCTCAACAACCATGCTGGGCATCT...TGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTACCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp CATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCTTCTCTTCACTTCCTCTTaGCACTTGGTGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HEVDANYEAVELSVLLCLLFTSS*HLVLLV
Trigger: CACCAGCAACACCAAGTGCAAAGAGGAAGTGAAGAG...AAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479522.5
ENST00000492756.5
CDS-3UTR CAA 90 bp CTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGTCCAATCCCTTGGAGTaGATGTCAGTCACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: LSFHEVDANYEAVELSVLSNPLE*MSVTWA
Trigger: TGCCCAAGTGACTGACATCAACTCCAAGGGATTGGA...CAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTCTGGTTCATCCCCATaGACTGTGCAGTCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: LNFLFCCVLDIVILDLIYSGSSP*TVQSLA
Trigger: AGCTAGGGACTGCACAGTCAATGGGGATGAACCAGA...ATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCATTCCATGTTCACATTaGGTGCAAGGGTCACAGTGT +
Preference number: 5 (lower is better)
Translates to: SMKLMPITKQLNFLFCCVIPCSH*VQGSQC
Trigger: ACACTGTGACCCTTGCACCAAATGTGAACATGGAAT...GACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CAA 90 bp TCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCATCTTTGCACTTGGTGTaGCTGGTGAGTGTGCATTCC +
Preference number: 5 (lower is better)
Translates to: SMCHTLLSFHEVDANYEASLHLV*LVSVHS
Trigger: GGAATGCACACTCACCAGCAACACCAAGTGCAAAGA...TGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAATCTTTGCACTTGGTGTaGCTGGTGAGTGTGCATTCC +
Preference number: 5 (lower is better)
Translates to: CHTLLSFHEVDANYEAVESLHLV*LVSVHS
Trigger: GGAATGCACACTCACCAGCAACACCAAGTGCAAAGA...TTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCCCTTCCTCTTTGCACTaGGTGTTGCTGGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: FFLSMKLMPITKQLNFLFPSSLH*VLLVSV
Trigger: CACACTCACCAGCAACACCAAGTGCAAAGAGGAAGG...GAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACCCTTCCTCTTTGCACTaGGTGTTGCTGGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNPSSLH*VLLVSV
Trigger: CACACTCACCAGCAACACCAAGTGCAAAGAGGAAGG...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GAGATCTTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCACCTTCCTCTTTGCACTaGGTGTTGCTGGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: EIFNQCVIRFFLSMKLMPPSSLH*VLLVSV
Trigger: CACACTCACCAGCAACACCAAGTGCAAAGAGGAAGG...TGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAAGATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCCTTCCTCTTTGCACTaGGTGTTGCTGGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: LLSFHEVDANYEAVELSVPSSLH*VLLVSV
Trigger: CACACTCACCAGCAACACCAAGTGCAAAGAGGAAGG...AACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATCCTTCCTCTTTGCACTaGGTGTTGCTGGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: LNFLFCCVLDIVILDLIYPSSLH*VLLVSV
Trigger: CACACTCACCAGCAACACCAAGTGCAAAGAGGAAGG...ATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGGATCCTTCCTCTTaGCACTTGGTGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LLSFHEVDANYEAVELSVLDPSS*HLVLLV
Trigger: CACCAGCAACACCAAGTGCAAAGAGGAAGGATCCAG...AACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GAGATCTTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCACTGGATCCTTCCTCTTaGCACTTGGTGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: EIFNQCVIRFFLSMKLMPLDPSS*HLVLLV
Trigger: CACCAGCAACACCAAGTGCAAAGAGGAAGGATCCAG...TGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAAGATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCAGATGCCCAGCATGGTaGTTGAGCAATCCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: FFLSMKLMPITKQLNFLFRCPAW*LSNPPK
Trigger: CTTCGGAGGATTGCTCAACAACCATGCTGGGCATCT...GAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAAACTTCCTCTTTGCACTaGGTGTTGCTGGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: CHTLLSFHEVDANYEAVETSSLH*VLLVSV
Trigger: CACACTCACCAGCAACACCAAGTGCAAAGAGGAAGT...TTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479522.5
ENST00000492756.5
CDS-3UTR CAA 90 bp GTCACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACACTCTTCACTTCCTCTTaGCACTTGGTGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: VTSNVLEDDSLNFLCKSTLFTSS*HLVLLV
Trigger: CACCAGCAACACCAAGTGCAAAGAGGAAGTGAAGAG...TGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479522.5
ENST00000492756.5
CDS CCA 90 bp ACAGTCTTCCTCAATTCCAATCCCTTGGAGTTGATGTCAGTCACTTaGGCATTAACACTTTTGGACGATAATCTAGCAACAGACGTAAGA +
Preference number: 5 (lower is better)
Translates to: TVFLNSNPLELMSVT*ALTLLDDNLATDVR
Trigger: TCTTACGTCTGTTGCTAGATTATCGTCCAAAAGTGTTAATGCCCAAGTGACTGACATCAACTCCAAGGGATTGGAATTGAGGAAGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000313771.9
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000357339.6
ENST00000371857.7
ENST00000460510.5
ENST00000466081.5
ENST00000477270.5
ENST00000479522.5
ENST00000484444.5
ENST00000487314.1
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000494799.5
ENST00000612663.5
ENST00000640140.1
ENST00000640681.1
ENST00000652046.1
CDS-3UTR CAA 90 bp GAGATCTTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCATCCAATCCCTTGGAGTaGATGTCAGTCACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: EIFNQCVIRFFLSMKLMPSNPLE*MSVTWA
Trigger: TGCCCAAGTGACTGACATCAACTCCAAGGGATTGGA...TGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAAGATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTCTCAATTCCAATCCCTaGGAGTTGATGTCAGTCACT +
Preference number: 5 (lower is better)
Translates to: LSMKLMPITKQLNFLFCCLNSNP*ELMSVT
Trigger: AGTGACTGACATCAACTCCAAGGGATTGGAATTGAG...ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAATCTGGTTCATCCCCATaGACTGTGCAGTCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: VILDLIYFGFIDTILSNKSGSSP*TVQSLA
Trigger: AGCTAGGGACTGCACAGTCAATGGGGATGAACCAGA...TTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp ATTGTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACTCTGGTTCATCCCCATaGACTGTGCAGTCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: IVILDLIYFGFIDTILSNSGSSP*TVQSLA
Trigger: AGCTAGGGACTGCACAGTCAATGGGGATGAACCAGA...GTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGTCTGGTTCATCCCCATaGACTGTGCAGTCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: FNQCVIRFFLSMKLMPITSGSSP*TVQSLA
Trigger: AGCTAGGGACTGCACAGTCAATGGGGATGAACCAGA...CGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCTTGAAGAAAAATGGGCTTaGTCTGTGTACTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: HEVDANYEAVELSVLLCLEEKWA*SVYSFP
Trigger: AGGGAAGGAGTACACAGACAAAGCCCATTTTTCTTC...AAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGGAAGAAAAATGGGCTTaGTCTGTGTACTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: QCVIRFFLSMKLMPITKQEEKWA*SVYSFP
Trigger: AGGGAAGGAGTACACAGACAAAGCCCATTTTTCTTC...CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGGTTTACATCTGCACTaGGTATTCTGGGTCCGGGTG +
Preference number: 5 (lower is better)
Translates to: VILDLIYFGFIDTILSNKGLHLH*VFWVRV
Trigger: CACCCGGACCCAGAATACCAAGTGCAGATGTAAACC...TTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CAA 90 bp CATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCTTATTCCATGTTCACATTaGGTGCAAGGGTCACAGTGT +
Preference number: 5 (lower is better)
Translates to: HEVDANYEAVELSVLLCLIPCSH*VQGSQC
Trigger: ACACTGTGACCCTTGCACCAAATGTGAACATGGAAT...AAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CAA 90 bp TTGACGAATAATCATGTGCTGTTTGGAAGAGGTCTTCTTGGCAATAGCAACCTAATTCCATGTTCACATTaGGTGCAAGGGTCACAGTGT +
Preference number: 5 (lower is better)
Translates to: LTNNHVLFGRGLLGNSNLIPCSH*VQGSQC
Trigger: ACACTGTGACCCTTGCACCAAATGTGAACATGGAAT...TAGGTTGCTATTGCCAAGAAGACCTCTTCCAAACAGCACATGATTATTCGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp ATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTCTTTGCACTTGGTGTaGCTGGTGAGTGTGCATTCC +
Preference number: 5 (lower is better)
Translates to: ILDLIYFGFIDTILSNKASLHLV*LVSVHS
Trigger: GGAATGCACACTCACCAGCAACACCAAGTGCAAAGA...GGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTCTTTGCACTTGGTGTaGCTGGTGAGTGTGCATTCC +
Preference number: 5 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNSLHLV*LVSVHS
Trigger: GGAATGCACACTCACCAGCAACACCAAGTGCAAAGA...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GAGATCTTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCATCTTTGCACTTGGTGTaGCTGGTGAGTGTGCATTCC +
Preference number: 5 (lower is better)
Translates to: EIFNQCVIRFFLSMKLMPSLHLV*LVSVHS
Trigger: GGAATGCACACTCACCAGCAACACCAAGTGCAAAGA...TGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAAGATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCGCTGTGTCTTGGACATaGTCATTCTTGATCTCATCT +
Preference number: 5 (lower is better)
Translates to: SMKLMPITKQLNFLFCCVAVSWT*SFLISS
Trigger: AGATGAGATCAAGAATGACAATGTCCAAGACACAGC...GACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTTCCTGTTCTGCTGTGTCTaGGACATTGTCATTCTTGAT +
Preference number: 5 (lower is better)
Translates to: KWPACSVTDISAKGHSFFLFCCV*DIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAG...GAAGAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp AGAGGTAATTTAGAGGCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCACCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: RGNLEAKWPACSVTDISAPITKQ*NFLFCC
Trigger: ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGG...TGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGCCTCTAAATTACCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp TCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCCCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SMKLMPITKQLNFLFCCVPITKQ*NFLFCC
Trigger: ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGG...GACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTTCCCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: KWPACSVTDISAKGHSFFPITKQ*NFLFCC
Trigger: ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGG...GAAGAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp AACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTTTAGATGCCCAGCATGGTaGTTGAGCAATCCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: NFLFCCVLDIVILDLIYFRCPAW*LSNPPK
Trigger: CTTCGGAGGATTGCTCAACAACCATGCTGGGCATCT...AAAATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTTATAACTATCTTCACAGTTTAAGATGCCCAGCATGGTaGTTGAGCAATCCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: FFRWFQVSASVYNYLHSLRCPAW*LSNPPK
Trigger: CTTCGGAGGATTGCTCAACAACCATGCTGGGCATCT...TAAACTGTGAAGATAGTTATAAACTGAAGCAGATACCTGGAACCACCTAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp TTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAGATGCCCAGCATGGTaGTTGAGCAATCCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: FNQCVIRFFLSMKLMPITRCPAW*LSNPPK
Trigger: CTTCGGAGGATTGCTCAACAACCATGCTGGGCATCT...CGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GCAAAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCCCACTGCATTTACTCTaGATGAAGTTTGTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: AKWPACSVTDISAKGHSFPLHLL*MKFVFP
Trigger: TGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGG...GAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS TCA 90 bp TGGGCTATGGAGCAAGACTCCATAGGATTTAAAGTTGGAGATTCATaGGAACCTTGGTTTTCCTTTCTGTGCTTTCTGCATGTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: WAMEQDSIGFKVGDS*EPWFSFLCFLHVFC
Trigger: ACAGAAAACATGCAGAAAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTTAAATCCTATGGAGTCTTGCTCCATAGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487314.1
ENST00000612663.5
CDS-3UTR CAA 90 bp AAGTGGCCTGCCTGTTCAGTAACTGATATTTCAGCAAAAGGTCATAGCTTCTTCTGGGCATTAACACTTTaGGACGATAATCTAGCAACA +
Preference number: 5 (lower is better)
Translates to: KWPACSVTDISAKGHSFFWALTL*DDNLAT
Trigger: TGTTGCTAGATTATCGTCCAAAAGTGTTAATGCCCA...GAAGAAGCTATGACCTTTTGCTGAAATATCAGTTACTGAACAGGCAGGCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp GTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACGTTGATGTCAGTCACTaGGGCATTAACACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: VIRFFLSMKLMPITKQLNVDVSH*GINTFG
Trigger: TCCAAAAGTGTTAATGCCCAAGTGACTGACATCAAC...GTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp ATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTCCAATCCCTTGGAGTaGATGTCAGTCACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: ISSILASLTPFFRTKPLTSNPLE*MSVTWA
Trigger: TGCCCAAGTGACTGACATCAACTCCAAGGGATTGGA...AGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTTTTCCAATCCCTTGGAGTaGATGTCAGTCACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: NFLFCCVLDIVILDLIYFSNPLE*MSVTWA
Trigger: TGCCCAAGTGACTGACATCAACTCCAAGGGATTGGA...AAAATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTATCCAATCCCTTGGAGTaGATGTCAGTCACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: RQNHEILKIYKYVGSSALSNPLE*MSVTWA
Trigger: TGCCCAAGTGACTGACATCAACTCCAAGGGATTGGA...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000652046.1
CDS-3UTR CAA 90 bp TTAAAGTTGGAGATTCATGAGAACCTTGGTTTTCCTTTCTGTGCTTTCTGCATGCTCAATTCCAATCCCTaGGAGTTGATGTCAGTCACT +
Preference number: 5 (lower is better)
Translates to: LKLEIHENLGFPFCAFCMLNSNP*ELMSVT
Trigger: AGTGACTGACATCAACTCCAAGGGATTGGAATTGAG...CATGCAGAAAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
CDS-3UTR CAA 90 bp TGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTCAATTCCAATCCCTaGGAGTTGATGTCAGTCACT +
Preference number: 5 (lower is better)
Translates to: CHTLLSFHEVDANYEAVELNSNP*ELMSVT
Trigger: AGTGACTGACATCAACTCCAAGGGATTGGAATTGAG...TTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TATGGTAAAATCTCTAGAATTATCAGAGGTAATTTAGAGGCAAAGTGGCCTGCCCTCAATTCCAATCCCTaGGAGTTGATGTCAGTCACT +
Preference number: 5 (lower is better)
Translates to: YGKISRIIRGNLEAKWPALNSNP*ELMSVT
Trigger: AGTGACTGACATCAACTCCAAGGGATTGGAATTGAG...GGCAGGCCACTTTGCCTCTAAATTACCTCTGATAATTCTAGAGATTTTACCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp GTACTTAGCATGCCACTGCATTTACTCTTGATGAAGTTTGTTTTCCCAACTAGAGAAGAAAAATGGGCTTaGTCTGTGTACTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: VLSMPLHLLLMKFVFPTREEKWA*SVYSFP
Trigger: AGGGAAGGAGTACACAGACAAAGCCCATTTTTCTTC...TCTAGTTGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGGCATGCTAAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp TATGGTAAAATCTCTAGAATTATCAGAGGTAATTTAGAGGCAAAGTGGCCTGCCGAAGAAAAATGGGCTTaGTCTGTGTACTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: YGKISRIIRGNLEAKWPAEEKWA*SVYSFP
Trigger: AGGGAAGGAGTACACAGACAAAGCCCATTTTTCTTC...GGCAGGCCACTTTGCCTCTAAATTACCTCTGATAATTCTAGAGATTTTACCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp ATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTATTCCATGTTCACATTaGGTGCAAGGGTCACAGTGT +
Preference number: 5 (lower is better)
Translates to: MCHTLLSFHEVDANYEAVIPCSH*VQGSQC
Trigger: ACACTGTGACCCTTGCACCAAATGTGAACATGGAAT...AACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CAA 90 bp AACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTTTTCTTTGCACTTGGTGTaGCTGGTGAGTGTGCATTCC +
Preference number: 5 (lower is better)
Translates to: NFLFCCVLDIVILDLIYFSLHLV*LVSVHS
Trigger: GGAATGCACACTCACCAGCAACACCAAGTGCAAAGA...AAAATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTATCTTTGCACTTGGTGTaGCTGGTGAGTGTGCATTCC +
Preference number: 5 (lower is better)
Translates to: RQNHEILKIYKYVGSSALSLHLV*LVSVHS
Trigger: GGAATGCACACTCACCAGCAACACCAAGTGCAAAGA...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000652046.1
CDS-3UTR CAA 90 bp GTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACGCTGTGTCTTGGACATaGTCATTCTTGATCTCATCT +
Preference number: 5 (lower is better)
Translates to: VIRFFLSMKLMPITKQLNAVSWT*SFLISS
Trigger: AGATGAGATCAAGAATGACAATGTCCAAGACACAGC...GTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTGCTGTGTCTTGGACATaGTCATTCTTGATCTCATCT +
Preference number: 5 (lower is better)
Translates to: FHEVDANYEAVELSVLLCAVSWT*SFLISS
Trigger: AGATGAGATCAAGAATGACAATGTCCAAGACACAGC...ACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGCTGTTCTGCTGTGTCTaGGACATTGTCATTCTTGAT +
Preference number: 5 (lower is better)
Translates to: SFHEVDANYEAVELSVLLLFCCV*DIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAG...CAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTCTGTTCTGCTGTGTCTaGGACATTGTCATTCTTGAT +
Preference number: 5 (lower is better)
Translates to: LSMKLMPITKQLNFLFCCLFCCV*DIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAG...ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACCCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: VIRFFLSMKLMPITKQLNPITKQ*NFLFCC
Trigger: ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGG...GTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTAAGGGCAGTCTaGCCTTTTGGTGGACTATTA +
Preference number: 5 (lower is better)
Translates to: VIRFFLSMKLMPITKQLNFLRAV*PFGGLL
Trigger: TAATAGTCCACCAAAAGGCAAGACTGCCCTTAGAAA...GTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR CAA 90 bp TTGACGAATAATCATGTGCTGTTTGGAAGAGGTCTTCTTGGCAATAGCAACCTATTTCTAAGGGCAGTCTaGCCTTTTGGTGGACTATTA +
Preference number: 5 (lower is better)
Translates to: LTNNHVLFGRGLLGNSNLFLRAV*PFGGLL
Trigger: TAATAGTCCACCAAAAGGCAAGACTGCCCTTAGAAA...TAGGTTGCTATTGCCAAGAAGACCTCTTCCAAACAGCACATGATTATTCGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp AGTAATACTCTCCTGCTCAAAATGCTTTTGATGCCTGAGAAAGAAGTAGGTAGTTTACATGGGACATTATaGAACATTTTCGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SNTLLLKMLLMPEKEVGSLHGTL*NIFGGG
Trigger: CCCACCCCCGAAAATGTTCAATAATGTCCCATGTAA...ACTACCTACTTCTTTCTCAGGCATCAAAAGCATTTTGAGCAGGAGAGTATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp TCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGACTTCCTCTTTGCACTaGGTGTTGCTGGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: SFLISSILASLTPFFRTKTSSLH*VLLVSV
Trigger: CACACTCACCAGCAACACCAAGTGCAAAGAGGAAGT...CTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479522.5
ENST00000492756.5
CDS-3UTR CAA 90 bp ATCCACATTCCAGTATCTGGAATACGAAACTGTTTGACGAATAATCATGTGCTGTTGGAAGAGGTCTTCTaGGCAATAGCAACCTATGGA +
Preference number: 5 (lower is better)
Translates to: IHIPVSGIRNCLTNNHVLLEEVF*AIATYG
Trigger: TCCATAGGTTGCTATTGCCAAGAAGACCTCTTCCAA...CAGCACATGATTATTCGTCAAACAGTTTCGTATTCCAGATACTGGAATGTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp AGGGTGTTCTCTAACTTAATCTTGTCTTGCAAAGTAGAACTTGCACTTCTGGCCGGAATACGAAACTGTTaGACGAATAATCATGTGCTG +
Preference number: 5 (lower is better)
Translates to: RVFSNLILSCKVELALLAGIRNC*TNNHVL
Trigger: CAGCACATGATTATTCGTCAAACAGTTTCGTATTCC...GGCCAGAAGTGCAAGTTCTACTTTGCAAGACAAGATTAAGTTAGAGAACACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp TGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAAGTTGATGTCAGTCACTaGGGCATTAACACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: CHTLLSFHEVDANYEAVEVDVSH*GINTFG
Trigger: TCCAAAAGTGTTAATGCCCAAGTGACTGACATCAAC...TTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGGTTGATGTCAGTCACTaGGGCATTAACACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: LSFHEVDANYEAVELSVLVDVSH*GINTFG
Trigger: TCCAAAAGTGTTAATGCCCAAGTGACTGACATCAAC...CAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GAGATCTTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCACTCAATTCCAATCCCTaGGAGTTGATGTCAGTCACT +
Preference number: 5 (lower is better)
Translates to: EIFNQCVIRFFLSMKLMPLNSNP*ELMSVT
Trigger: AGTGACTGACATCAACTCCAAGGGATTGGAATTGAG...TGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAAGATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTGAAGAAAAATGGGCTTaGTCTGTGTACTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: FLISSILASLTPFFRTKPEEKWA*SVYSFP
Trigger: AGGGAAGGAGTACACAGACAAAGCCCATTTTTCTTC...AGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACGAAGAAAAATGGGCTTaGTCTGTGTACTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNEEKWA*SVYSFP
Trigger: AGGGAAGGAGTACACAGACAAAGCCCATTTTTCTTC...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTGAAGAAAAATGGGCTTaGTCTGTGTACTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LDLIYFGFIDTILSNKAFEEKWA*SVYSFP
Trigger: AGGGAAGGAGTACACAGACAAAGCCCATTTTTCTTC...AAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACATTCCATGTTCACATTaGGTGCAAGGGTCACAGTGT +
Preference number: 5 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNIPCSH*VQGSQC
Trigger: ACACTGTGACCCTTGCACCAAATGTGAACATGGAAT...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000612663.5
CDS-3UTR CAA 90 bp TCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGTCTGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: SMKLMPITKQLNFLFCCVWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...GACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TATGGTAAAATCTCTAGAATTATCAGAGGTAATTTAGAGGCAAAGTGGCCTGCCGCTGTGTCTTGGACATaGTCATTCTTGATCTCATCT +
Preference number: 5 (lower is better)
Translates to: YGKISRIIRGNLEAKWPAAVSWT*SFLISS
Trigger: AGATGAGATCAAGAATGACAATGTCCAAGACACAGC...GGCAGGCCACTTTGCCTCTAAATTACCTCTGATAATTCTAGAGATTTTACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp TTAAAGTTGGAGATTCATGAGAACCTTGGTTTTCCTTTCTGTGCTTTCTGCATGGCTGTGTCTTGGACATaGTCATTCTTGATCTCATCT +
Preference number: 5 (lower is better)
Translates to: LKLEIHENLGFPFCAFCMAVSWT*SFLISS
Trigger: AGATGAGATCAAGAATGACAATGTCCAAGACACAGC...CATGCAGAAAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
CDS-3UTR CAA 90 bp CTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTTCTGCTGTGTCTaGGACATTGTCATTCTTGAT +
Preference number: 5 (lower is better)
Translates to: LSFHEVDANYEAVELSVLLFCCV*DIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAG...CAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AGTAATACTCTCCTGCTCAAAATGCTTTTGATGCCTGAGAAAGAAGTAGGTAGTCTGTTCTGCTGTGTCTaGGACATTGTCATTCTTGAT +
Preference number: 5 (lower is better)
Translates to: SNTLLLKMLLMPEKEVGSLFCCV*DIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAG...ACTACCTACTTCTTTCTCAGGCATCAAAAGCATTTTGAGCAGGAGAGTATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp TCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCACCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SMCHTLLSFHEVDANYEAPITKQ*NFLFCC
Trigger: ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGG...TGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGGCTTTCCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: VLEDDSLNFLCKSTKIGFPITKQ*NFLFCC
Trigger: ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGG...AAAGCCAATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTAAAGTTGGAGATTCATGAGAACCTTGGTTTTCCTTTCTGTGCTTTCTGCATGCCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: LKLEIHENLGFPFCAFCMPITKQ*NFLFCC
Trigger: ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGG...CATGCAGAAAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
CDS-3UTR CAA 90 bp TCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGCCACTGCATTTACTCTaGATGAAGTTTGTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: SFHEVDANYEAVELSVLLPLHLL*MKFVFP
Trigger: TGGGAAAACAAACTTCATCAAGAGTAAATGCAGTGG...CAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352159.8
ENST00000355740.7
CDS-3UTR CAA 90 bp AAAATCCTCCATAAATGGAAGTTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTATAATCATGTGCTGTTaGGAAGAGGTCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: KILHKWKFFRWFQVSASVIIMCC*EEVFLA
Trigger: TGCCAAGAAGACCTCTTCCAAACAGCACATGATTAT...AACTGAAGCAGATACCTGGAACCACCTAAAGAACTTCCATTTATGGAGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp TTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGGGCATTAACACTTTaGGACGATAATCTAGCAACA +
Preference number: 5 (lower is better)
Translates to: FLSMKLMPITKQLNFLFCWALTL*DDNLAT
Trigger: TGTTGCTAGATTATCGTCCAAAAGTGTTAATGCCCA...GCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTGTTGATGTCAGTCACTaGGGCATTAACACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: LLSFHEVDANYEAVELSVVDVSH*GINTFG
Trigger: TCCAAAAGTGTTAATGCCCAAGTGACTGACATCAAC...AACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTGTTGATGTCAGTCACTaGGGCATTAACACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: FLISSILASLTPFFRTKPVDVSH*GINTFG
Trigger: TCCAAAAGTGTTAATGCCCAAGTGACTGACATCAAC...AGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTTTCTCAATTCCAATCCCTaGGAGTTGATGTCAGTCACT +
Preference number: 5 (lower is better)
Translates to: NFLFCCVLDIVILDLIYFLNSNP*ELMSVT
Trigger: AGTGACTGACATCAACTCCAAGGGATTGGAATTGAG...AAAATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAACTCAATTCCAATCCCTaGGAGTTGATGTCAGTCACT +
Preference number: 5 (lower is better)
Translates to: VILDLIYFGFIDTILSNKLNSNP*ELMSVT
Trigger: AGTGACTGACATCAACTCCAAGGGATTGGAATTGAG...TTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTCTCAATTCCAATCCCTaGGAGTTGATGTCAGTCACT +
Preference number: 5 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKILNSNP*ELMSVT
Trigger: AGTGACTGACATCAACTCCAAGGGATTGGAATTGAG...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGGAAGAAAAATGGGCTTaGTCTGTGTACTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: SFLISSILASLTPFFRTKEEKWA*SVYSFP
Trigger: AGGGAAGGAGTACACAGACAAAGCCCATTTTTCTTC...CTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CCACTGTTTCAGGATTTAAAGTTGGAGATTCATGAGAACCTTGGTTTTCCTTTCAGATTCATGAGAACCTaGGTTTTCCTTTCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: PLFQDLKLEIHENLGFPFRFMRT*VFLSVL
Trigger: AAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCT...GAAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTTAAATCCTGAAACAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
CDS-3UTR CAA 90 bp ATCCACATTCCAGTATCTGGAATACGAAACTGTTTGACGAATAATCATGTGCTGAGATTCATGAGAACCTaGGTTTTCCTTTCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: IHIPVSGIRNCLTNNHVLRFMRT*VFLSVL
Trigger: AAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCT...CAGCACATGATTATTCGTCAAACAGTTTCGTATTCCAGATACTGGAATGTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp TCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: SFHEVDANYEAVELSVLLWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...CAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGGCTGTGTCTTGGACATaGTCATTCTTGATCTCATCT +
Preference number: 5 (lower is better)
Translates to: NQCVIRFFLSMKLMPITKAVSWT*SFLISS
Trigger: AGATGAGATCAAGAATGACAATGTCCAAGACACAGC...CTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTGCTGTGTCTTGGACATaGTCATTCTTGATCTCATCT +
Preference number: 5 (lower is better)
Translates to: FLISSILASLTPFFRTKPAVSWT*SFLISS
Trigger: AGATGAGATCAAGAATGACAATGTCCAAGACACAGC...AGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp ATTCCAGTATCTGGAATACGAAACTGTTTGACGAATAATCATGTGCTGTTTGGAGCTGTGTCTTGGACATaGTCATTCTTGATCTCATCT +
Preference number: 5 (lower is better)
Translates to: IPVSGIRNCLTNNHVLFGAVSWT*SFLISS
Trigger: AGATGAGATCAAGAATGACAATGTCCAAGACACAGC...TCCAAACAGCACATGATTATTCGTCAAACAGTTTCGTATTCCAGATACTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGCTGTTCTGCTGTGTCTaGGACATTGTCATTCTTGAT +
Preference number: 5 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKLFCCV*DIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAG...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACCCAATTACGAAGCAGTaGAACTTTCTGTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNPITKQ*NFLFCC
Trigger: ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGG...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AGTAATACTCTCCTGCTCAAAATGCTTTTGATGCCTGAGAAAGAAGTAGGTAGTTTTCTTTCCATGAAGTaGATGCCAATTACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SNTLLLKMLLMPEKEVGSFLSMK*MPITKQ
Trigger: CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA...ACTACCTACTTCTTTCTCAGGCATCAAAAGCATTTTGAGCAGGAGAGTATTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp ATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTTTTCTTTCCATGAAGTaGATGCCAATTACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: MCHTLLSFHEVDANYEAVFLSMK*MPITKQ
Trigger: CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA...AACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AAAATCCTCCATAAATGGAAGTTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTTTTCTTTCCATGAAGTaGATGCCAATTACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: KILHKWKFFRWFQVSASVFLSMK*MPITKQ
Trigger: CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA...AACTGAAGCAGATACCTGGAACCACCTAAAGAACTTCCATTTATGGAGGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp CTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGCTGTACTCTAGACCAAGCTTaGGATTTCATTTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: LSMKLMPITKQLNFLFCCTLDQA*DFISEV
Trigger: AACTTCAGAAATGAAATCCAAAGCTTGGTCTAGAGT...ACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACACTCTAGACCAAGCTTaGGATTTCATTTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: VIRFFLSMKLMPITKQLNTLDQA*DFISEV
Trigger: AACTTCAGAAATGAAATCCAAAGCTTGGTCTAGAGT...GTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTATTACATGGGACATTATaGAACATTTTCGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RQNHEILKIYKYVGSSALLHGTL*NIFGGG
Trigger: CCCACCCCCGAAAATGTTCAATAATGTCCCATGTAA...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp AACCAGGCTAGAATTTCTAAGGGCAGTCTTGCCTTTTGGTGGACTATTAAGTATATTACTAGCATTAAATaGCAGAAAAGAAAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: NQARISKGSLAFWWTIKYITSIK*QKRKVA
Trigger: GGCCACCTTTCTTTTCTGCAATTTAATGCTAGTAAT...ATACTTAATAGTCCACCAAAAGGCAAGACTGCCCTTAGAAATTCTAGCCTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652046.1
CDS-3UTR CAA 90 bp TTGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTGGGCATTAACACTTTaGGACGATAATCTAGCAACA +
Preference number: 5 (lower is better)
Translates to: LNFLFCCVLDIVILDLIYWALTL*DDNLAT
Trigger: TGTTGCTAGATTATCGTCCAAAAGTGTTAATGCCCA...ATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTGGGCATTAACACTTTaGGACGATAATCTAGCAACA +
Preference number: 5 (lower is better)
Translates to: FLISSILASLTPFFRTKPWALTL*DDNLAT
Trigger: TGTTGCTAGATTATCGTCCAAAAGTGTTAATGCCCA...AGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTAGTTGATGTCAGTCACTaGGGCATTAACACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: RQNHEILKIYKYVGSSALVDVSH*GINTFG
Trigger: TCCAAAAGTGTTAATGCCCAAGTGACTGACATCAAC...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000484444.5
ENST00000652046.1
CDS-3UTR CAA 90 bp ATTGTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACGTTGATGTCAGTCACTaGGGCATTAACACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: IVILDLIYFGFIDTILSNVDVSH*GINTFG
Trigger: TCCAAAAGTGTTAATGCCCAAGTGACTGACATCAAC...GTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGTTGATGTCAGTCACTaGGGCATTAACACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKIVDVSH*GINTFG
Trigger: TCCAAAAGTGTTAATGCCCAAGTGACTGACATCAAC...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTTTGTTGATGTCAGTCACTaGGGCATTAACACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: NFLFCCVLDIVILDLIYFVDVSH*GINTFG
Trigger: TCCAAAAGTGTTAATGCCCAAGTGACTGACATCAAC...AAAATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp ATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCAGATTCATGAGAACCTaGGTTTTCCTTTCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: ILDLIYFGFIDTILSNKARFMRT*VFLSVL
Trigger: AAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCT...GGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTGAGATTCATGAGAACCTaGGTTTTCCTTTCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: LIYFGFIDTILSNKAFNLRFMRT*VFLSVL
Trigger: AAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCT...CAAGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GAGATCTTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAAGATTCATGAGAACCTaGGTTTTCCTTTCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: EIFNQCVIRFFLSMKLMPRFMRT*VFLSVL
Trigger: AAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCT...TGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAAGATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTAGATTCATGAGAACCTaGGTTTTCCTTTCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: LLSFHEVDANYEAVELSVRFMRT*VFLSVL
Trigger: AAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCT...AACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GAGCATAATCTTAATCTTTCATCCTCTGCATACACTCCTATTTGGGTACTTAGCTGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: EHNLNLSSSAYTPIWVLSWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...GCTAAGTACCCAAATAGGAGTGTATGCAGAGGATGAAAGATTAAGATTATGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp CTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTGTGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: LSFHEVDANYEAVELSVLWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...CAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAATGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: CHTLLSFHEVDANYEAVEWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...TTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTGCTGTGTCTTGGACATaGTCATTCTTGATCTCATCT +
Preference number: 5 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKIAVSWT*SFLISS
Trigger: AGATGAGATCAAGAATGACAATGTCCAAGACACAGC...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAACTGTTCTGCTGTGTCTaGGACATTGTCATTCTTGAT +
Preference number: 5 (lower is better)
Translates to: VILDLIYFGFIDTILSNKLFCCV*DIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAG...TTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp ATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTCTGTTCTGCTGTGTCTaGGACATTGTCATTCTTGAT +
Preference number: 5 (lower is better)
Translates to: ISSILASLTPFFRTKPLTLFCCV*DIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAG...AGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTTTCTGTTCTGCTGTGTCTaGGACATTGTCATTCTTGAT +
Preference number: 5 (lower is better)
Translates to: NFLFCCVLDIVILDLIYFLFCCV*DIVILD
Trigger: ATCAAGAATGACAATGTCCAAGACACAGCAGAACAG...AAAATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTTTTCTTTCCATGAAGTaGATGCCAATTACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: LLSFHEVDANYEAVELSVFLSMK*MPITKQ
Trigger: CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA...AACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTTCTTTCCATGAAGTaGATGCCAATTACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: FLISSILASLTPFFRTKPFLSMK*MPITKQ
Trigger: CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA...AGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTCTTTCTTTCCATGAAGTTGATGCCAATTACGAAGCAGTTGAACTTTCTGTTCTTTCTTTCCATGAAGTaGATGCCAATTACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: FFLSMKLMPITKQLNFLFFLSMK*MPITKQ
Trigger: CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA...GAACAGAAAGTTCAACTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp CCACTGTTTCAGGATTTAAAGTTGGAGATTCATGAGAACCTTGGTTTTCCTTTCACTCTAGACCAAGCTTaGGATTTCATTTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: PLFQDLKLEIHENLGFPFTLDQA*DFISEV
Trigger: AACTTCAGAAATGAAATCCAAAGCTTGGTCTAGAGT...GAAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTTAAATCCTGAAACAGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479522.5
ENST00000484444.5
CDS-3UTR CAA 90 bp GTCACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAACTCTAGACCAAGCTTaGGATTTCATTTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: VTSNVLEDDSLNFLCKSTTLDQA*DFISEV
Trigger: AACTTCAGAAATGAAATCCAAAGCTTGGTCTAGAGT...TGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAATGGGCATTAACACTTTaGGACGATAATCTAGCAACA +
Preference number: 5 (lower is better)
Translates to: VILDLIYFGFIDTILSNKWALTL*DDNLAT
Trigger: TGTTGCTAGATTATCGTCCAAAAGTGTTAATGCCCA...TTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGAGATTCATGAGAACCTaGGTTTTCCTTTCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: FNQCVIRFFLSMKLMPITRFMRT*VFLSVL
Trigger: AAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCT...CGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000612663.5
CDS-3UTR CAA 90 bp ACTAGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGTGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: TSNVLEDDSLNFLCKSTKWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...CTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATTTTTTTCTTTCCATGAAGTaGATGCCAATTACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: NFLFCCVLDIVILDLIYFFLSMK*MPITKQ
Trigger: CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA...AAAATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp ATTGTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACTTTCTTTCCATGAAGTaGATGCCAATTACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: IVILDLIYFGFIDTILSNFLSMK*MPITKQ
Trigger: CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA...GTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTTTTCTTTCCATGAAGTaGATGCCAATTACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKIFLSMK*MPITKQ
Trigger: CTGCTTCGTAATTGGCATCAACTTCATGGAAAGAAA...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp GATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACCATCAGATAAATTTATaGCCACTGTTTCCCCAAACA +
Preference number: 5 (lower is better)
Translates to: DLIYFGFIDTILSNKAFNHQINL*PLFPQT
Trigger: TGTTTGGGGAAACAGTGGCAATAAATTTATCTGATG...GTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000494410.5
CDS-3UTR CAA 90 bp TTGAACTTTCTGTTCTGCTGTGTCTTGGACATTGTCATTCTTGATCTCATCTATACTCTAGACCAAGCTTaGGATTTCATTTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: LNFLFCCVLDIVILDLIYTLDQA*DFISEV
Trigger: AACTTCAGAAATGAAATCCAAAGCTTGGTCTAGAGT...ATAGATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp TTCTTTAGGTGGTTCCAGGTATCTGCTTCAGTTTATAACTATCTTCACAGTTTACTGCTCAAAATGCTTTaGATGCCTGAGAAAGAAGTA +
Preference number: 5 (lower is better)
Translates to: FFRWFQVSASVYNYLHSLLLKML*MPEKEV
Trigger: TACTTCTTTCTCAGGCATCAAAAGCATTTTGAGCAG...TAAACTGTGAAGATAGTTATAAACTGAAGCAGATACCTGGAACCACCTAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000652046.1
CDS-3UTR CAA 90 bp ATTGTCATTCTTGATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACTGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: IVILDLIYFGFIDTILSNWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...GTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGATCAAGAATGACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp ATCTCATCTATTTTGGCTTCATTGACACCATTCTTTCGAACAAAGCCTTTAACTTGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: ISSILASLTPFFRTKPLTWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...AGTTAAAGGCTTTGTTCGAAAGAATGGTGTCAATGAAGCCAAAATAGATGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AGTAATGTCCTTGAGGATGATAGTCTGAATTTTCTCTGCAAGAGTACAAAGATTTGGACATTGTCATTCTaGATCTCATCTATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: SNVLEDDSLNFLCKSTKIWTLSF*ISSILA
Trigger: AGCCAAAATAGATGAGATCAAGAATGACAATGTCCA...AATCTTTGTACTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
CDS-3UTR CAA 90 bp AGGCAGAATCATGAGATATTAAAAATCTACAAATATGTTGGCTCTTCAGCGCTACATCAGATAAATTTATaGCCACTGTTTCCCCAAACA +
Preference number: 5 (lower is better)
Translates to: RQNHEILKIYKYVGSSALHQINL*PLFPQT
Trigger: TGTTTGGGGAAACAGTGGCAATAAATTTATCTGATG...TAGCGCTGAAGAGCCAACATATTTGTAGATTTTTAATATCTCATGATTCTGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS-3UTR CAA 90 bp TTTAATCAATGTGTCATACGCTTCTTTCTTTCCATGAAGTTGATGCCAATTACGACTCTAGACCAAGCTTaGGATTTCATTTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: FNQCVIRFFLSMKLMPITTLDQA*DFISEV
Trigger: AACTTCAGAAATGAAATCCAAAGCTTGGTCTAGAGT...CGTAATTGGCATCAACTTCATGGAAAGAAAGAAGCGTATGACACATTGATTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000479522.5
ENST00000484444.5
ENST00000494410.5
ENST00000612663.5
CDS CCA 72 bp GTCCGCACCCCACGCCCACCTCAACGTGGAGCGCAGTaGTCTCCGAGGAGCGCCGGAGCTGCCCCGCCTGCC +
Preference number: 6 (lower is better)
Translates to: VRTPRPPQRGAQ*SPRSAGAAPPA
Trigger: GGCAGGCGGGGCAGCTCCGGCGCTCCTCGGAGACCACTGCGCTCCACGTTGAGGTGGGCGTGGGGTGCGGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460510.5
CDS GCA 72 bp ACGTGGAGCGCAGTGGTCTCCGAGGAGCGCCGGAGCTaGCCCGCCTGCCCAGCGGGGTCAGCACTTCGCATC +
Preference number: 6 (lower is better)
Translates to: TWSAVVSEERRS*PACPAGSALRI
Trigger: GATGCGAAGTGCTGACCCCGCTGGGCAGGCGGGGCAGCTCCGGCGCTCCTCGGAGACCACTGCGCTCCACGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460510.5
ENST00000477270.5
CDS CAA 90 bp CCCGCGGGGCGGCGCGCACTCACCCACCCGCGCCGGAGCGGACCTTaGGCTTGGCTTGTCAGGGCTTGTCCAGGAGTTCCGCTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: PAGRRALTHPRRSGP*AWLVRACPGVPLLS
Trigger: AGAGAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTGAGTGCGCGCCGCCCCGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313771.9
CDS CCA 72 bp GGCGCGCACTCACCCACCCGCGCCGGAGCGGACCTTTaGCTTGGCTTGTCAGGGCTTGTCCAGGAGTTCCGC +
Preference number: 6 (lower is better)
Translates to: GAHSPTRAGADL*LGLSGLVQEFR
Trigger: GCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTGAGTGCGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313771.9
CDS CAA 72 bp CGGCGCGCACTCACCCACCCGCGCCGGAGCGGACCTTaGGCTTGGCTTGTCAGGGCTTGTCCAGGAGTTCCG +
Preference number: 6 (lower is better)
Translates to: RRALTHPRRSGP*AWLVRACPGVP
Trigger: CGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTGAGTGCGCGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313771.9
CDS CAA 90 bp AACCCACCCGCGCCGGAGCGGACCTTTGGCTTGGCTTGTCAGGGCTaGTCCAGGAGTTCCGCTCCTCTCTCCAACCGGGGTCCCCCTCCA +
Preference number: 6 (lower is better)
Translates to: NPPAPERTFGLACQG*SRSSAPLSNRGPPP
Trigger: TGGAGGGGGACCCCGGTTGGAGAGAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460510.5
CDS CCA 72 bp GCACTCACCCACCCGCGCCGGAGCGGACCTTTGGCTTaGCTTGTCAGGGCTTGTCCAGGAGTTCCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: ALTHPRRSGPLA*LVRACPGVPLL
Trigger: GAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTGAGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313771.9
CDS CAA 72 bp CGCACTCACCCACCCGCGCCGGAGCGGACCTTTGGCTaGGCTTGTCAGGGCTTGTCCAGGAGTTCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: RTHPPAPERTFG*ACQGLSRSSAP
Trigger: AGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTGAGTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313771.9
CDS CAA 90 bp GTGGTCAGGAGGATGGGAAGGAAGCCTCGCTGGGGAACGCCCGGGTaGGGGAGGGCTCCATTGATTCAGCAACTTGGCCTGCGCGCGGGT +
Preference number: 6 (lower is better)
Translates to: VVRRMGRKPRWGTPG*GRAPLIQQLGLRAG
Trigger: ACCCGCGCGCAGGCCAAGTTGCTGAATCAATGGAGCCCTCCCCAACCCGGGCGTTCCCCAGCGAGGCTTCCTTCCCATCCTCCTGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355740.7
CDS CAA 72 bp TCACCCACCCGCGCCGGAGCGGACCTTTGGCTTGGCTaGTCAGGGCTTGTCCAGGAGTTCCGCTCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: SPTRAGADLWLG*SGLVQEFRSSL
Trigger: GAGAGAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313771.9
CDS CAA 72 bp GCGCCGGAGCGGACCTTTGGCTTGGCTTGTCAGGGCTaGTCCAGGAGTTCCGCTCCTCTCTCCAACCGGGGT +
Preference number: 6 (lower is better)
Translates to: APERTFGLACQG*SRSSAPLSNRG
Trigger: ACCCCGGTTGGAGAGAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460510.5
CDS CAA 72 bp GAACCCACCCGCGCCGGAGCGGACCTTTGGCTTGGCTaGTCAGGGCTTGTCCAGGAGTTCCGCTCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: EPTRAGADLWLG*SGLVQEFRSSL
Trigger: GAGAGAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460510.5
CDS CCA 72 bp GTAAGAACCCACCCGCGCCGGAGCGGACCTTTGGCTTaGCTTGTCAGGGCTTGTCCAGGAGTTCCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: VRTHPRRSGPLA*LVRACPGVPLL
Trigger: GAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTTCTTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460510.5
CDS CAA 72 bp CGTAAGAACCCACCCGCGCCGGAGCGGACCTTTGGCTaGGCTTGTCAGGGCTTGTCCAGGAGTTCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: RKNPPAPERTFG*ACQGLSRSSAP
Trigger: AGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTTCTTACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460510.5
CDS CAA 72 bp ACAGACGTAAGAACCCACCCGCGCCGGAGCGGACCTTaGGCTTGGCTTGTCAGGGCTTGTCCAGGAGTTCCG +
Preference number: 6 (lower is better)
Translates to: TDVRTHPRRSGP*AWLVRACPGVP
Trigger: CGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTTCTTACGTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460510.5
CDS CAA 90 bp AGCAACAGACGTAAGAACCCACCCGCGCCGGAGCGGACCTTTGGCTaGGCTTGTCAGGGCTTGTCCAGGAGTTCCGCTCCTCTCTCCAAC +
Preference number: 6 (lower is better)
Translates to: SNRRKNPPAPERTFG*ACQGLSRSSAPLSN
Trigger: GTTGGAGAGAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTTCTTACGTCTGTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460510.5
CDS TCA 72 bp ATCCTCCGAAGTGAAAGAGCTTCCCCAACTCCGTACTaGGCGGGTCCACCAACCCGCGGGAGAAGAGGCAGC +
Preference number: 6 (lower is better)
Translates to: ILRSERASPTPY*AGPPTRGRRGS
Trigger: GCTGCCTCTTCTCCCGCGGGTTGGTGGACCCGCTCAGTACGGAGTTGGGGAAGCTCTTTCACTTCGGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352159.8
ENST00000355740.7
ENST00000357339.6
ENST00000484444.5
ENST00000612663.5
CDS CAA 90 bp AATCTAGCAACAGACGTAAGAACCCACCCGCGCCGGAGCGGACCTTaGGCTTGGCTTGTCAGGGCTTGTCCAGGAGTTCCGCTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: NLATDVRTHPRRSGP*AWLVRACPGVPLLS
Trigger: AGAGAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGCCAAAGGTCCGCTCCGGCGCGGGTGGGTTCTTACGTCTGTTGCTAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460510.5
CDS CAA 90 bp TACTCCTTCCCTTCTTGGCAGGGCACGCAGTCTGGTTCATCCCCATaGACTGTGCAGTCCCTAGCTTTCCTTTCACCTGGAGGACAGGGC +
Preference number: 6 (lower is better)
Translates to: YSFPSWQGTQSGSSP*TVQSLAFLSPGGQG
Trigger: GCCCTGTCCTCCAGGTGAAAGGAAAGCTAGGGACTGCACAGTCAATGGGGATGAACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000313771.9
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000357339.6
ENST00000371857.7
ENST00000460510.5
ENST00000466081.5
ENST00000477270.5
ENST00000487314.1
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
ENST00000640140.1
ENST00000640681.1
ENST00000652046.1
CDS CAA 90 bp GCCAAGTCACTCGTAAACCGCTTCCCTCACTCCCCAGAAGCGTCTTaGAACACCTGTGTGTCACTCTTGCGCGAGATCAGAGACGAGCTC +
Preference number: 6 (lower is better)
Translates to: AKSLVNRFPHSPEAS*NTCVSLLREIRDEL
Trigger: GAGCTCGTCTCTGATCTCGCGCAAGAGTGACACACAGGTGTTCAAAGACGCTTCTGGGGAGTGAGGGAAGCGGTTTACGAGTGACTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000612663.5
CDS CAA 72 bp TCCCCAGAAGCGTCTTTGAACACCTGTGTGTCACTCTaGCGCGAGATCAGAGACGAGCTCACGAAAAGCCCC +
Preference number: 6 (lower is better)
Translates to: SPEASLNTCVSL*REIRDELTKSP
Trigger: GGGGCTTTTCGTGAGCTCGTCTCTGATCTCGCGCAAGAGTGACACACAGGTGTTCAAAGACGCTTCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000612663.5
CDS GCA 72 bp AAGGTGCCGTTCTTCCGAGCCCTCCGGCTTAACCACTaGTTCGGTGCTGACTTATTTCCTACGTCTGAGAAC +
Preference number: 6 (lower is better)
Translates to: KVPFFRALRLNH*FGADLFPTSEN
Trigger: GTTCTCAGACGTAGGAAATAAGTCAGCACCGAAGCAGTGGTTAAGCCGGAGGGCTCGGAAGAACGGCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313771.9
ENST00000371857.7
ENST00000466081.5
CDS CCA 72 bp TGTGTACTCCTTCCCTTCTTGGCAGGGCACGCAGTCTaGTTCATCCCCATTGACTGTGCAGTCCCTAGCTTT +
Preference number: 6 (lower is better)
Translates to: CVLLPFLAGHAV*FIPIDCAVPSF
Trigger: AAAGCTAGGGACTGCACAGTCAATGGGGATGAACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000313771.9
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000357339.6
ENST00000371857.7
ENST00000460510.5
ENST00000466081.5
ENST00000477270.5
ENST00000487314.1
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
ENST00000640140.1
ENST00000640681.1
ENST00000652046.1
CDS CAA 72 bp CTCGTAAACCGCTTCCCTCACTCCCCAGAAGCGTCTTaGAACACCTGTGTGTCACTCTTGCGCGAGATCAGA +
Preference number: 6 (lower is better)
Translates to: LVNRFPHSPEAS*NTCVSLLREIR
Trigger: TCTGATCTCGCGCAAGAGTGACACACAGGTGTTCAAAGACGCTTCTGGGGAGTGAGGGAAGCGGTTTACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355740.7
ENST00000612663.5
CDS CCA 72 bp GAAAAATGGGCTTTGTCTGTGTACTCCTTCCCTTCTTaGCAGGGCACGCAGTCTGGTTCATCCCCATTGACT +
Preference number: 6 (lower is better)
Translates to: EKWALSVYSFPS*QGTQSGSSPLT
Trigger: AGTCAATGGGGATGAACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTACACAGACAAAGCCCATTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 17 transcripts:
ENST00000313771.9
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000357339.6
ENST00000371857.7
ENST00000460510.5
ENST00000466081.5
ENST00000477270.5
ENST00000487314.1
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
ENST00000640140.1
ENST00000640681.1
ENST00000652046.1
CDS CAA 72 bp AGAAAAATGGGCTTTGTCTGTGTACTCCTTCCCTTCTaGGCAGGGCACGCAGTCTGGTTCATCCCCATTGAC +
Preference number: 6 (lower is better)
Translates to: RKMGFVCVLLPF*AGHAVWFIPID
Trigger: GTCAATGGGGATGAACCAGACTGCGTGCCCTGCCAAGAAGGGAAGGAGTACACAGACAAAGCCCATTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 17 transcripts:
ENST00000313771.9
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000357339.6
ENST00000371857.7
ENST00000460510.5
ENST00000466081.5
ENST00000477270.5
ENST00000487314.1
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000612663.5
ENST00000640140.1
ENST00000640681.1
ENST00000652046.1
CDS CAA 90 bp GATCCTTCCTCTTTGCACTTGGTGTTGCTGGTGAGTGTGCATTCCTaGATGATTCCATGTTCACATCTGGAGGACAGGGCTTATGGCAGA +
Preference number: 6 (lower is better)
Translates to: DPSSLHLVLLVSVHS*MIPCSHLEDRAYGR
Trigger: TCTGCCATAAGCCCTGTCCTCCAGATGTGAACATGGAATCATCAAGGAATGCACACTCACCAGCAACACCAAGTGCAAAGAGGAAGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484444.5
ENST00000494799.5
CDS GCA 72 bp ACAGACGTAAGAACCCAAAATTGGCAGTATCTGCTGTaGACAGGCAAAGACAATGTGAGGGCTCCACTGTCT +
Preference number: 6 (lower is better)
Translates to: TDVRTQNWQYLL*TGKDNVRAPLS
Trigger: AGACAGTGGAGCCCTCACATTGTCTTTGCCTGTGCACAGCAGATACTGCCAATTTTGGGTTCTTACGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640140.1
CDS CAA 90 bp TTCACTTCCTCTTTGCACTTGGTGTTGCTGGTGAGTGTGCATTCCTaGATGATTCCATGTTCACATCTGGAGGACAGGGCTTATGGCAGA +
Preference number: 6 (lower is better)
Translates to: FTSSLHLVLLVSVHS*MIPCSHLEDRAYGR
Trigger: TCTGCCATAAGCCCTGTCCTCCAGATGTGAACATGGAATCATCAAGGAATGCACACTCACCAGCAACACCAAGTGCAAAGAGGAAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479522.5
CDS CAA 72 bp CACCCCAAGTTAGATCTGGATCCTTCCTCTTTGCACTaGGTGTTGCTGGTGAGTGTGCATTCCTTGATGATT +
Preference number: 6 (lower is better)
Translates to: HPKLDLDPSSLH*VLLVSVHSLMI
Trigger: AATCATCAAGGAATGCACACTCACCAGCAACACCAAGTGCAAAGAGGAAGGATCCAGATCTAACTTGGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000313771.9
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000477270.5
ENST00000484444.5
ENST00000487314.1
ENST00000488877.5
ENST00000494410.5
ENST00000494799.5
ENST00000612663.5
ENST00000640140.1
ENST00000640681.1
ENST00000652046.1
CDS GCA 72 bp TGCTTCGGTGCTGACTTATTTCCTACGTCTGAGAACTaGCAGAAAATGAGCAATATCTGTTCTGAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: CFGADLFPTSEN*QKMSNICSEGC
Trigger: GCAGCCTTCAGAACAGATATTGCTCATTTTCTGGCAGTTCTCAGACGTAGGAAATAAGTCAGCACCGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313771.9
CDS CAA 90 bp GATCCTTCCTCTTTGCACTTGGTGTTGCTGGTGAGTGTGCATTCCTaGATGATTCCATGTTCACATCATGTCCTTCATCACACAATCTAC +
Preference number: 6 (lower is better)
Translates to: DPSSLHLVLLVSVHS*MIPCSHHVLHHTIY
Trigger: GTAGATTGTGTGATGAAGGACATGATGTGAACATGGAATCATCAAGGAATGCACACTCACCAGCAACACCAAGTGCAAAGAGGAAGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488877.5
ENST00000494410.5
CDS CAA 90 bp TTACCTTCCTCTTTGCACTTGGTGTTGCTGGTGAGTGTGCATTCCTaGATGATTCCATGTTCACATCATGTCCTTCATCACACAATCTAC +
Preference number: 6 (lower is better)
Translates to: LPSSLHLVLLVSVHS*MIPCSHHVLHHTIY
Trigger: GTAGATTGTGTGATGAAGGACATGATGTGAACATGGAATCATCAAGGAATGCACACTCACCAGCAACACCAAGTGCAAAGAGGAAGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466081.5
CDS CAA 90 bp TTCACTTCCTCTTTGCACTTGGTGTTGCTGGTGAGTGTGCATTCCTaGATGATTCCATGTTCACATCATGTCCTTCATCACACAATCTAC +
Preference number: 6 (lower is better)
Translates to: FTSSLHLVLLVSVHS*MIPCSHHVLHHTIY
Trigger: GTAGATTGTGTGATGAAGGACATGATGTGAACATGGAATCATCAAGGAATGCACACTCACCAGCAACACCAAGTGCAAAGAGGAAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492756.5
CDS CAA 90 bp ACTTCTAAGCCATGTCCTTCATCACACAATCTACATCTTCTGCATTaGGAAGAAAAATGGGCTTTGTCTGTGTACTCCTTCCCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: TSKPCPSSHNLHLLH*EEKWALSVYSFPSW
Trigger: CCAAGAAGGGAAGGAGTACACAGACAAAGCCCATTTTTCTTCCAAATGCAGAAGATGTAGATTGTGTGATGAAGGACATGGCTTAGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000313771.9
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000357339.6
ENST00000371857.7
ENST00000460510.5
ENST00000477270.5
ENST00000487314.1
ENST00000612663.5
ENST00000640140.1
ENST00000640681.1
ENST00000652046.1
CDS CAA 72 bp TCAACTGTAGTAACAGTCTTCCTCAATTCCAATCCCTaGGAGTTGATGTCAGTCACTTGGGCATTAACACTT +
Preference number: 6 (lower is better)
Translates to: STVVTVFLNSNP*ELMSVTWALTL
Trigger: AAGTGTTAATGCCCAAGTGACTGACATCAACTCCAAGGGATTGGAATTGAGGAAGACTGTTACTACAGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000313771.9
ENST00000352159.8
ENST00000355279.2
ENST00000355740.7
ENST00000357339.6
ENST00000371857.7
ENST00000460510.5
ENST00000466081.5
ENST00000477270.5
ENST00000479522.5
ENST00000484444.5
ENST00000487314.1
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
ENST00000494799.5
ENST00000612663.5
ENST00000640140.1
ENST00000640681.1
ENST00000652046.1
CDS CAA 72 bp TTTCAGATTTCTCTCTCCAAGAAAGCAGCAGGTCACTaGTATAGCAGTTTGGATCTCAGGTTCTTCAAACCA +
Preference number: 6 (lower is better)
Translates to: FQISLSKKAAGH*YSSLDLRFFKP
Trigger: TGGTTTGAAGAACCTGAGATCCAAACTGCTATACAAGTGACCTGCTGCTTTCTTGGAGAGAGAAATCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640140.1
CDS CAA 90 bp ATGTTCACATCATGTCCTTCATCACACAATCTACATCTTCTGCATTaGGAAGAAAAATGGGCTTTGTCTGTGTACTCCTTCCCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: MFTSCPSSHNLHLLH*EEKWALSVYSFPSW
Trigger: CCAAGAAGGGAAGGAGTACACAGACAAAGCCCATTTTTCTTCCAAATGCAGAAGATGTAGATTGTGTGATGAAGGACATGATGTGAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000466081.5
ENST00000488877.5
ENST00000492756.5
ENST00000494410.5
CDS TCA 72 bp GAGCAAGACTCCATAGGATTTAAAGTTGGAGATTCATaGGAACCTTGGTTTTCCTTTCTGTGCTTTCTGCAT +
Preference number: 6 (lower is better)
Translates to: EQDSIGFKVGDS*EPWFSFLCFLH
Trigger: ATGCAGAAAGCACAGAAAGGAAAACCAAGGTTCTCATGAATCTCCAACTTTAAATCCTATGGAGTCTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487314.1
ENST00000612663.5
CDS CCA 72 bp ATAACCTCTTCCTCACAGGCTTGTTGTGAAAATACGTaGAATAATGCACTTAAAGCTGTTAGCACAGAACCT +
Preference number: 6 (lower is better)
Translates to: ITSSSQACCENT*NNALKAVSTEP
Trigger: AGGTTCTGTGCTAACAGCTTTAAGTGCATTATTCCACGTATTTTCACAACAAGCCTGTGAGGAAGAGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640681.1