RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FARSA (Homo sapiens)

Ensembl gene IDs: ENSG00000179115

Ensembl transcript IDs: ENST00000314606.9, ENST00000423140.6, ENST00000586146.5, ENST00000586280.1, ENST00000587488.5, ENST00000587981.1, ENST00000588025.5, ENST00000588965.5, ENST00000592662.5, ENST00000593021.1

Found 379 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGATGACCTGTCCTAGAGTGGCCCATGTCACGCAGCCTCCTGTGTaGGAGGGGGCCTCGGCTCGGCATCCAGGCGGCACAGGGGACTGT +
Preference number: 1 (lower is better)
Translates to: RMTCPRVAHVTQPPV*EGASARHPGGTGDC
Trigger: ACAGTCCCCTGTGCCGCCTGGATGCCGAGCCGAGGCCCCCTCCCACACAGGAGGCTGCGTGACATGGGCCACTCTAGGACAGGTCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR TCA 90 bp ACTTGTACCCCTGTGAGCCGTAGCCGCCCTGAGAGTGGGTCCGCTTaGCCCGCTGGACATAGTCCATTGGGAGCTGCAGGGCCTCCGCTG +
Preference number: 1 (lower is better)
Translates to: TCTPVSRSRPESGSA*PAGHSPLGAAGPPL
Trigger: CAGCGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAGCGGGTCAAGCGGACCCACTCTCAGGGCGGCTACGGCTCACAGGGGTACAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR TCA 90 bp TGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATaGCCTGTCCTAGAGTGGCCCATGTCACGCAGCCTCCTGTGTGGG +
Preference number: 1 (lower is better)
Translates to: WPGMQRSAAAGTRGG*PVLEWPMSRSLLCG
Trigger: CCCACACAGGAGGCTGCGTGACATGGGCCACTCTAGGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CCA 90 bp GCCGCCCTGAGAGTGGGTCCGCTTGACCCGCTGGACATAGTCCATTaGGAGCTGCAGGGCCTCCGCTGGATCTCGAAGGAAGAAGGTGTC +
Preference number: 1 (lower is better)
Translates to: AALRVGPLDPLDIVH*ELQGLRWISKEEGV
Trigger: GACACCTTCTTCCTTCGAGATCCAGCGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAGCGGGTCAAGCGGACCCACTCTCAGGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CCA 90 bp GCTTCTTCTGGGCAAGGCGGTAGAGCGCACGGGCGCTGGCTGATGTaGTGTGGGTTCGCAGTAGGTTTTTCCGGGCCTCGTCCAGCTTCC +
Preference number: 1 (lower is better)
Translates to: ASSGQGGRAHGRWLM*CGFAVGFSGPRPAS
Trigger: GGAAGCTGGACGAGGCCCGGAAAAACCTACTGCGAACCCACACCACATCAGCCAGCGCCCGTGCGCTCTACCGCCTTGCCCAGAAGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR TCA 90 bp AAGAACTCCCGCAGAACGCCCATGAGGTGGCCCAAGGTGAGACCATaGTCCGCCACCACGCCCTCGATCTGGTGGAACTCAGCCAGGTGC +
Preference number: 1 (lower is better)
Translates to: KNSRRTPMRWPKVRP*SATTPSIWWNSARC
Trigger: GCACCTGGCTGAGTTCCACCAGATCGAGGGCGTGGTGGCGGATCATGGTCTCACCTTGGGCCACCTCATGGGCGTTCTGCGGGAGTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CCA 90 bp GATCCGCCACCACGCCCTCGATCTGGTGGAACTCAGCCAGGTGCGTaGCGTCCAGGGTCTCATTCCGGAATACGCGGTCGATGGAGAAGT +
Preference number: 1 (lower is better)
Translates to: DPPPRPRSGGTQPGA*RPGSHSGIRGRWRS
Trigger: ACTTCTCCATCGACCGCGTATTCCGGAATGAGACCCTGGACGCCACGCACCTGGCTGAGTTCCACCAGATCGAGGGCGTGGTGGCGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR GCA 90 bp GCTGGATCTCGAAGGAAGAAGGTGTCGTGCTGGTCACGGGCTGGGTaGTGCTGGGGCTGGAAGAGGGCGTCAAAGTTCCAGAAGGAGCTC +
Preference number: 1 (lower is better)
Translates to: AGSRRKKVSCWSRAG*CWGWKRASKFQKEL
Trigger: GAGCTCCTTCTGGAACTTTGACGCCCTCTTCCAGCCCCAGCAGCACCCAGCCCGTGACCAGCACGACACCTTCTTCCTTCGAGATCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CCA 90 bp CTCCGCTGGATCTCGAAGGAAGAAGGTGTCGTGCTGGTCACGGGCTaGGTGCTGCTGGGGCTGGAAGAGGGCGTCAAAGTTCCAGAAGGA +
Preference number: 1 (lower is better)
Translates to: LRWISKEEGVVLVTG*VLLGLEEGVKVPEG
Trigger: TCCTTCTGGAACTTTGACGCCCTCTTCCAGCCCCAGCAGCACCCAGCCCGTGACCAGCACGACACCTTCTTCCTTCGAGATCCAGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR GCA 90 bp CTGGCCTCACAGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATaGAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCC +
Preference number: 1 (lower is better)
Translates to: LASQRPHKYKVTGQG*KGAQQQGLGEDDLS
Trigger: GGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCTGTGAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
3UTR GCA 90 bp CTCGGCTCGGCATCCAGGCGGCACAGGGGACTGTCATACACCATCTaGAGGTTCACCTTGTGGCCCACCAGCTCCCGGATATTGTTGATG +
Preference number: 1 (lower is better)
Translates to: LGSASRRHRGLSYTI*RFTLWPTSSRILLM
Trigger: CATCAACAATATCCGGGAGCTGGTGGGCCACAAGGTGAACCTGCAGATGGTGTATGACAGTCCCCTGTGCCGCCTGGATGCCGAGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CCA 90 bp AATGACCGACACGTTCTCGGGAAGCCCCATGGGCAGCAGCATCTCTaGACGGAAGACCCCCGAGTTTCCGACCTCCACCCACTTCTTCAG +
Preference number: 1 (lower is better)
Translates to: NDRHVLGKPHGQQHL*TEDPRVSDLHPLLQ
Trigger: CTGAAGAAGTGGGTGGAGGTCGGAAACTCGGGGGTCTTCCGTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGAACGTGTCGGTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CCA 90 bp TCTCGAAGGAAGAAGGTGTCGTGCTGGTCACGGGCTGGGTGCTGCTaGGGCTGGAAGAGGGCGTCAAAGTTCCAGAAGGAGCTCTCAATG +
Preference number: 1 (lower is better)
Translates to: SRRKKVSCWSRAGCC*GWKRASKFQKELSM
Trigger: CATTGAGAGCTCCTTCTGGAACTTTGACGCCCTCTTCCAGCCCCAGCAGCACCCAGCCCGTGACCAGCACGACACCTTCTTCCTTCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR GCA 90 bp CCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTaGTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACAGGT +
Preference number: 1 (lower is better)
Translates to: PTLTVDTPHRTTEGT*YPVLCPWDSGPGTG
Trigger: ACCTGTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
3UTR CCA 90 bp AGGAAGAAGGTGTCGTGCTGGTCACGGGCTGGGTGCTGCTGGGGCTaGAAGAGGGCGTCAAAGTTCCAGAAGGAGCTCTCAATGAAGTTA +
Preference number: 1 (lower is better)
Translates to: RKKVSCWSRAGCCWG*KRASKFQKELSMKL
Trigger: TAACTTCATTGAGAGCTCCTTCTGGAACTTTGACGCCCTCTTCCAGCCCCAGCAGCACCCAGCCCGTGACCAGCACGACACCTTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CCA 90 bp AGGCGGCACAGGGGACTGTCATACACCATCTGCAGGTTCACCTTGTaGCCCACCAGCTCCCGGATATTGTTGATGCCATATTTGATCATC +
Preference number: 1 (lower is better)
Translates to: RRHRGLSYTICRFTL*PTSSRILLMPYLII
Trigger: GATGATCAAATATGGCATCAACAATATCCGGGAGCTGGTGGGCCACAAGGTGAACCTGCAGATGGTGTATGACAGTCCCCTGTGCCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR TCA 90 bp CCAGGCGGCACAGGGGACTGTCATACACCATCTGCAGGTTCACCTTGTGGCCCACGCACGGGCGCTGGCTaGTGTGGTGTGGGTTCGCAG +
Preference number: 2 (lower is better)
Translates to: PGGTGDCHTPSAGSPCGPRTGAG*CGVGSQ
Trigger: CTGCGAACCCACACCACATCAGCCAGCGCCCGTGCG...TGGGCCACAAGGTGAACCTGCAGATGGTGTATGACAGTCCCCTGTGCCGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR CCA 90 bp ACCATGATCCGCCACCACGCCCTCGATCTGGTGGAACTCAGCCAGGTGCGTGGCGGGTGCTGCTGGGGCTaGAAGAGGGCGTCAAAGTTC +
Preference number: 2 (lower is better)
Translates to: TMIRHHALDLVELSQVRGGCCWG*KRASKF
Trigger: GAACTTTGACGCCCTCTTCCAGCCCCAGCAGCACCC...GCCACGCACCTGGCTGAGTTCCACCAGATCGAGGGCGTGGTGGCGGATCATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR CCA 90 bp GAAGAACTCCCGCAGAACGCCCATGAGGTGGCCCAAGGTGAGACCATGATCCGCGTGCTGGTCACGGGCTaGGTGCTGCTGGGGCTGGAA +
Preference number: 2 (lower is better)
Translates to: EELPQNAHEVAQGETMIRVLVTG*VLLGLE
Trigger: TTCCAGCCCCAGCAGCACCCAGCCCGTGACCAGCAC...GCGGATCATGGTCTCACCTTGGGCCACCTCATGGGCGTTCTGCGGGAGTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR TCA 90 bp CCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGGGACTCGGGGAGGATaGCCTGTCCTAGAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: PQVSSGPTLTVDTPHRTTGTRGG*PVLEWP
Trigger: GGGCCACTCTAGGACAGGTCATCCTCCCCGAGTCCC...TGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
3UTR-3UTR CCA 90 bp CCTCGGCTCGGCATCCAGGCGGCACAGGGGACTGTCATACACCATCTGCAGGTTACGCCCTCGATCTGGTaGAACTCAGCCAGGTGCGTG +
Preference number: 2 (lower is better)
Translates to: PRLGIQAAQGTVIHHLQVTPSIW*NSARCV
Trigger: CACGCACCTGGCTGAGTTCCACCAGATCGAGGGCGT...AACCTGCAGATGGTGTATGACAGTCCCCTGTGCCGCCTGGATGCCGAGCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR TCA 90 bp AACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACGGGACTCGGGGAGGATaGCCTGTCCTAGAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: NRRNLLPSPLSLGFWSWDGTRGG*PVLEWP
Trigger: GGGCCACTCTAGGACAGGTCATCCTCCCCGAGTCCC...GTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
3UTR-3UTR TCA 90 bp GCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCGGGACTCGGGGAGGATaGCCTGTCCTAGAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: AHPHSRHTTQDNRRNLLPGTRGG*PVLEWP
Trigger: GGGCCACTCTAGGACAGGTCATCCTCCCCGAGTCCC...GGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
3UTR-3UTR CCA 90 bp CGGCACAGGGGACTGTCATACACCATCTGCAGGTTCACCTTGTGGCCCACCAGCGGGCAGCAGCATCTCTaGACGGAAGACCCCCGAGTT +
Preference number: 2 (lower is better)
Translates to: RHRGLSYTICRFTLWPTSGQQHL*TEDPRV
Trigger: AACTCGGGGGTCTTCCGTCCAGAGATGCTGCTGCCC...GCTGGTGGGCCACAAGGTGAACCTGCAGATGGTGTATGACAGTCCCCTGTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR TCA 90 bp CCCCGAGTTTCCGACCTCCACCCACTTCTTCAGGCCTTGGTGGTAGCTGAACACGAGAGTGGGTCCGCTTaGCCCGCTGGACATAGTCCA +
Preference number: 2 (lower is better)
Translates to: PRVSDLHPLLQALVVAEHESGSA*PAGHSP
Trigger: TGGACTATGTCCAGCGGGTCAAGCGGACCCACTCTC...GTGTTCAGCTACCACCAAGGCCTGAAGAAGTGGGTGGAGGTCGGAAACTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR CCA 90 bp AATGACCGACACGTTCTCGGGAAGCCCCATGGGCAGCAGCATCTCTGGACGGAAGAGGAAGGTGGGGGCTaGCCTCACAGAGGCCTCATA +
Preference number: 2 (lower is better)
Translates to: NDRHVLGKPHGQQHLWTEEEGGG*PHRGLI
Trigger: TATGAGGCCTCTGTGAGGCCAGCCCCCACCTTCCTC...TTCCGTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGAACGTGTCGGTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR CCA 90 bp AATGACCGACACGTTCTCGGGAAGCCCCATGGGCAGCAGCATCTCTGGACGGAAACCACGCCCTCGATCTaGTGGAACTCAGCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: NDRHVLGKPHGQQHLWTETTPSI*WNSARC
Trigger: GCACCTGGCTGAGTTCCACCAGATCGAGGGCGTGGT...TTCCGTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGAACGTGTCGGTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR CCA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCGAGGAAGGTGGGGGCTaGCCTCACAGAGGCCTCATA +
Preference number: 2 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRAEEGGG*PHRGLI
Trigger: TATGAGGCCTCTGTGAGGCCAGCCCCCACCTTCCTC...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
3UTR-3UTR CCA 90 bp GGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGAGGAAGGTGGGGGCTaGCCTCACAGAGGCCTCATA +
Preference number: 2 (lower is better)
Translates to: GLINTRSLARDAKERSSREEGGG*PHRGLI
Trigger: TATGAGGCCTCTGTGAGGCCAGCCCCCACCTTCCTC...CCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
3UTR-3UTR CCA 90 bp TCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCGAGGAAGGTGGGGGCTaGCCTCACAGAGGCCTCATA +
Preference number: 2 (lower is better)
Translates to: SGPTLTVDTPHRTTEGTCEEGGG*PHRGLI
Trigger: TATGAGGCCTCTGTGAGGCCAGCCCCCACCTTCCTC...GCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
3UTR-3UTR GCA 90 bp ACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCAGGAAGAAGGTGTCGTaGTGGTCACGGGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: TGQQKEPATQSSVPGILVRKKVS*WSRAGC
Trigger: GCACCCAGCCCGTGACCAGCACGACACCTTCTTCCT...GACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR CCA 90 bp GGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGCCAGTCCTCTGTCCCTaGGATTCTGGTCCTGGGACA +
Preference number: 2 (lower is better)
Translates to: GLINTRSLARDAKERSSRPVLCP*DSGPGT
Trigger: TGTCCCAGGACCAGAATCCCAGGGACAGAGGACTGG...CCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
3UTR-3UTR CCA 90 bp GCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCCTGCAGGGCCTCCGCTaGATCTCGAAGGAAGAAGGT +
Preference number: 2 (lower is better)
Translates to: AHPHSRHTTQDNRRNLLPLQGLR*ISKEEG
Trigger: ACCTTCTTCCTTCGAGATCCAGCGGAGGCCCTGCAG...GGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CAA 90 bp ACCATCTGCAGGTTCACCTTGTGGCCCACCAGCTCCCGGATATTGTaGATGCCATATTTGATCATCGTTGGGCGCTCCAGGGAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: TICRFTLWPTSSRIL*MPYLIIVGRSRERP
Trigger: GGGCCTCTCCCTGGAGCGCCCAACGATGATCAAATATGGCATCAACAATATCCGGGAGCTGGTGGGCCACAAGGTGAACCTGCAGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR GCA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCACAACAGAAGGAACCTaGTACCCAGTCCTCTGTCCC +
Preference number: 2 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRATTEGT*YPVLCP
Trigger: GGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
3UTR-3UTR CCA 90 bp CCCCGAGTTTCCGACCTCCACCCACTTCTTCAGGCCTTGGTGGTAGCTGAACACCTGGCTGATGTGGTGTaGGTTCGCAGTAGGTTTTTC +
Preference number: 2 (lower is better)
Translates to: PRVSDLHPLLQALVVAEHLADVV*VRSRFF
Trigger: GAAAAACCTACTGCGAACCCACACCACATCAGCCAG...GTGTTCAGCTACCACCAAGGCCTGAAGAAGTGGGTGGAGGTCGGAAACTCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CAA 90 bp TACACCATCTGCAGGTTCACCTTGTGGCCCACCAGCTCCCGGATATaGTTGATGCCATATTTGATCATCGTTGGGCGCTCCAGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: YTICRFTLWPTSSRI*LMPYLIIVGRSRER
Trigger: CCTCTCCCTGGAGCGCCCAACGATGATCAAATATGGCATCAACAATATCCGGGAGCTGGTGGGCCACAAGGTGAACCTGCAGATGGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CAA 90 bp TCCAGGCGGCACAGGGGACTGTCATACACCATCTGCAGGTTCACCTaGTGGCCCACCAGCTCCCGGATATTGTTGATGCCATATTTGATC +
Preference number: 2 (lower is better)
Translates to: SRRHRGLSYTICRFT*WPTSSRILLMPYLI
Trigger: GATCAAATATGGCATCAACAATATCCGGGAGCTGGTGGGCCACAAGGTGAACCTGCAGATGGTGTATGACAGTCCCCTGTGCCGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR GCA 90 bp ACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTACAACAGAAGGAACCTaGTACCCAGTCCTCTGTCCC +
Preference number: 2 (lower is better)
Translates to: TLLDNRWPTGLLRAHPHSTTEGT*YPVLCP
Trigger: GGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT...ACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
3UTR CCA 72 bp TGTCCTAGAGTGGCCCATGTCACGCAGCCTCCTGTGTaGGAGGGGGCCTCGGCTCGGCATCCAGGCGGCACA +
Preference number: 3 (lower is better)
Translates to: CPRVAHVTQPPV*EGASARHPGGT
Trigger: TGTGCCGCCTGGATGCCGAGCCGAGGCCCCCTCCCACACAGGAGGCTGCGTGACATGGGCCACTCTAGGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR TCA 72 bp CCTGTGAGCCGTAGCCGCCCTGAGAGTGGGTCCGCTTaGCCCGCTGGACATAGTCCATTGGGAGCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: PVSRSRPESGSA*PAGHSPLGAAG
Trigger: CCCTGCAGCTCCCAATGGACTATGTCCAGCGGGTCAAGCGGACCCACTCTCAGGGCGGCTACGGCTCACAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR TCA 72 bp TCATCGTTGGGCGCTCCAGGGAGAGGCCCCAGGCAATaGCCGACACGTTCTCGGGAAGCCCCATGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: SSLGAPGRGPRQ*PTRSREAPWAA
Trigger: TGCTGCCCATGGGGCTTCCCGAGAACGTGTCGGTCATTGCCTGGGGCCTCTCCCTGGAGCGCCCAACGATGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR GCA 72 bp GCCACCACGCCCTCGATCTGGTGGAACTCAGCCAGGTaGGTGGCGTCCAGGGTCTCATTCCGGAATACGCGG +
Preference number: 3 (lower is better)
Translates to: ATTPSIWWNSAR*VASRVSFRNTR
Trigger: CCGCGTATTCCGGAATGAGACCCTGGACGCCACGCACCTGGCTGAGTTCCACCAGATCGAGGGCGTGGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CCA 72 bp GGGCAAGGCGGTAGAGCGCACGGGCGCTGGCTGATGTaGTGTGGGTTCGCAGTAGGTTTTTCCGGGCCTCGT +
Preference number: 3 (lower is better)
Translates to: GQGGRAHGRWLM*CGFAVGFSGPR
Trigger: ACGAGGCCCGGAAAAACCTACTGCGAACCCACACCACATCAGCCAGCGCCCGTGCGCTCTACCGCCTTGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CCA 72 bp CCACGCCCTCGATCTGGTGGAACTCAGCCAGGTGCGTaGCGTCCAGGGTCTCATTCCGGAATACGCGGTCGA +
Preference number: 3 (lower is better)
Translates to: PRPRSGGTQPGA*RPGSHSGIRGR
Trigger: TCGACCGCGTATTCCGGAATGAGACCCTGGACGCCACGCACCTGGCTGAGTTCCACCAGATCGAGGGCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CCA 72 bp CACGTTCTCGGGAAGCCCCATGGGCAGCAGCATCTCTaGACGGAAGACCCCCGAGTTTCCGACCTCCACCCA +
Preference number: 3 (lower is better)
Translates to: HVLGKPHGQQHL*TEDPRVSDLHP
Trigger: TGGGTGGAGGTCGGAAACTCGGGGGTCTTCCGTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGAACGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR TCA 72 bp CGCAGAACGCCCATGAGGTGGCCCAAGGTGAGACCATaGTCCGCCACCACGCCCTCGATCTGGTGGAACTCA +
Preference number: 3 (lower is better)
Translates to: RRTPMRWPKVRP*SATTPSIWWNS
Trigger: TGAGTTCCACCAGATCGAGGGCGTGGTGGCGGATCATGGTCTCACCTTGGGCCACCTCATGGGCGTTCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR TCA 72 bp ATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATaGCCTGTCCTAGAGTGGCCCATGTCACGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: MQRSAAAGTRGG*PVLEWPMSRSL
Trigger: GAGGCTGCGTGACATGGGCCACTCTAGGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CCA 72 bp GTGTCGTGCTGGTCACGGGCTGGGTGCTGCTGGGGCTaGAAGAGGGCGTCAAAGTTCCAGAAGGAGCTCTCA +
Preference number: 3 (lower is better)
Translates to: VSCWSRAGCCWG*KRASKFQKELS
Trigger: TGAGAGCTCCTTCTGGAACTTTGACGCCCTCTTCCAGCCCCAGCAGCACCCAGCCCGTGACCAGCACGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR GCA 72 bp GCATCCAGGCGGCACAGGGGACTGTCATACACCATCTaGAGGTTCACCTTGTGGCCCACCAGCTCCCGGATA +
Preference number: 3 (lower is better)
Translates to: ASRRHRGLSYTI*RFTLWPTSSRI
Trigger: TATCCGGGAGCTGGTGGGCCACAAGGTGAACCTGCAGATGGTGTATGACAGTCCCCTGTGCCGCCTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CCA 72 bp AGAGTGGGTCCGCTTGACCCGCTGGACATAGTCCATTaGGAGCTGCAGGGCCTCCGCTGGATCTCGAAGGAA +
Preference number: 3 (lower is better)
Translates to: RVGPLDPLDIVH*ELQGLRWISKE
Trigger: TTCCTTCGAGATCCAGCGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAGCGGGTCAAGCGGACCCACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CCA 72 bp GCTTCTTCTGGGCAAGGCGGTAGAGCGCACGGGCGCTaGCTGATGTGGTGTGGGTTCGCAGTAGGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: ASSGQGGRAHGR*LMWCGFAVGFS
Trigger: GGAAAAACCTACTGCGAACCCACACCACATCAGCCAGCGCCCGTGCGCTCTACCGCCTTGCCCAGAAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR CAA 90 bp ATCATCGTTGGGCGCTCCAGGGAGAGGCCCCAGGCAATGACCGACACGTTCTCGTGGCTTGAAGCGGAGTaGCGTGATACCCAGCTTGGT +
Preference number: 3 (lower is better)
Translates to: IIVGRSRERPQAMTDTFSWLEAE*RDTQLG
Trigger: ACCAAGCTGGGTATCACGCAACTCCGCTTCAAGCCA...CGAGAACGTGTCGGTCATTGCCTGGGGCCTCTCCCTGGAGCGCCCAACGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR-3UTR CAA 90 bp CCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGCTGGACATAGTCCATaGGGAGCTGCAGGGCCTCCG +
Preference number: 3 (lower is better)
Translates to: PTLTVDTPHRTTEGTCYPAGHSP*GAAGPP
Trigger: CGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAGC...TGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR GCA 72 bp CAGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATaGAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGAT +
Preference number: 3 (lower is better)
Translates to: QRPHKYKVTGQG*KGAQQQGLGED
Trigger: ATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
3UTR CCA 72 bp ACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTaGGATTCTGGTCCTGGGACAGGTGGGAAAGAGGAA +
Preference number: 3 (lower is better)
Translates to: TTEGTCYPVLCP*DSGPGTGGKEE
Trigger: TTCCTCTTTCCCACCTGTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
3UTR CCA 72 bp GTGGTAGCTGAACACCTCCATGCTGGGCTCTGTGTATaGGTTGTAGGCTGGCTTGAAGCGGAGTTGCGTGAT +
Preference number: 3 (lower is better)
Translates to: VVAEHLHAGLCV*VVGWLEAELRD
Trigger: ATCACGCAACTCCGCTTCAAGCCAGCCTACAACCCATACACAGAGCCCAGCATGGAGGTGTTCAGCTACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR GCA 72 bp ACAGTAGACACACCACACAGGACAACAGAAGGAACCTaGTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCT +
Preference number: 3 (lower is better)
Translates to: TVDTPHRTTEGT*YPVLCPWDSGP
Trigger: AGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
3UTR CCA 72 bp AGGGGACTGTCATACACCATCTGCAGGTTCACCTTGTaGCCCACCAGCTCCCGGATATTGTTGATGCCATAT +
Preference number: 3 (lower is better)
Translates to: RGLSYTICRFTL*PTSSRILLMPY
Trigger: ATATGGCATCAACAATATCCGGGAGCTGGTGGGCCACAAGGTGAACCTGCAGATGGTGTATGACAGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR TCA 90 bp GGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCCACTGGGAGCGGACCTTaGGCAGCGGGTGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GQGCKGAQQQGLGEDDLSTGSGP*AAGEGG
Trigger: GCCACCTTCACCCGCTGCTCAAGGTCCGCTCCCAGT...GGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp ACCACGCCCTCGATCTGGTGGAACTCAGCCAGGTGCGTGGCGTCCAGGGTCTCACGCACGGGCGCTGGCTaGTGTGGTGTGGGTTCGCAG +
Preference number: 4 (lower is better)
Translates to: TTPSIWWNSARCVASRVSRTGAG*CGVGSQ
Trigger: CTGCGAACCCACACCACATCAGCCAGCGCCCGTGCG...TGAGACCCTGGACGCCACGCACCTGGCTGAGTTCCACCAGATCGAGGGCGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR GCA 90 bp GCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCCTCCCACCACCGCCTGGTaGTCCATGCCCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ARDAKERSSRDSGRMTCPPTTAW*SMPSSA
Trigger: GGCTGAGCTGGGCATGGAGCACCAGGCGGTGGTGGG...AGGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CAGGGCCTCCGCTGGATCTCGAAGGAAGAAGGTGTCGTGCTGGTCACGGGCTGGGCGCCCACCACCGCCTaGTGCTCCATGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QGLRWISKEEGVVLVTGWAPTTA*CSMPSS
Trigger: TGAGCTGGGCATGGAGCACCAGGCGGTGGTGGGCGC...CCAGCCCGTGACCAGCACGACACCTTCTTCCTTCGAGATCCAGCGGAGGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp GGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCCCGCATAAGCTCGCTCTaGGCCAGGCCCTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GQGCKGAQQQGLGEDDLSRISSL*ARPSGG
Trigger: TCCCCCAGAGGGCCTGGCCCAGAGCGAGCTTATGCG...GGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp GACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACCTCGCCCAGCGCCTaGAGGCTCTTCACGGCGCCC +
Preference number: 4 (lower is better)
Translates to: DNRWPTGLLRAHPHSRHTTSPSA*RLFTAP
Trigger: GGGCGCCGTGAAGAGCCTTCAGGCGCTGGGCGAGGT...GGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp ATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAACCTCGCCCAGCGCCTaGAGGCTCTTCACGGCGCCC +
Preference number: 4 (lower is better)
Translates to: IQGHWPGMQRSAAAGTRGTSPSA*RLFTAP
Trigger: GGGCGCCGTGAAGAGCCTTCAGGCGCTGGGCGAGGT...TCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp GACCGACACGTTCTCGGGAAGCCCCATGGGCAGCAGCATCTCTGGACGGAAGACACCTTGAGCAGCGGGTaGAGGTGGCCGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: DRHVLGKPHGQQHLWTEDTLSSG*RWPLSG
Trigger: CCCCGACAGCGGCCACCTTCACCCGCTGCTCAAGGT...GTCTTCCGTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGAACGTGTCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR GCA 90 bp CAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGACCGCCTGGTGCTCCATaGCCAGCTCAGCCGCCAACT +
Preference number: 4 (lower is better)
Translates to: QGHWPGMQRSAAAGTRGGPPGAP*PAQPPT
Trigger: AGTTGGCGGCTGAGCTGGGCATGGAGCACCAGGCGG...TCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCGCATAAGCTCGCTCTaGGCCAGGCCCTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: VTGQGCKGAQQQGLGEDDRISSL*ARPSGG
Trigger: TCCCCCAGAGGGCCTGGCCCAGAGCGAGCTTATGCG...GTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCCAGAGCGCACGGGCGCTaGCTGATGTGGTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GQGCKGAQQQGLGEDDLSRAHGR*LMWCGF
Trigger: GAACCCACACCACATCAGCCAGCGCCCGTGCGCTCT...GGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CGGCACAGGGGACTGTCATACACCATCTGCAGGTTCACCTTGTGGCCCACCAGCACGCAGCCTCCTGTGTaGGAGGGGGCCTCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: RHRGLSYTICRFTLWPTSTQPPV*EGASAR
Trigger: CCGAGCCGAGGCCCCCTCCCACACAGGAGGCTGCGT...GCTGGTGGGCCACAAGGTGAACCTGCAGATGGTGTATGACAGTCCCCTGTGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR TCA 90 bp GGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCCAGCAGTTCCGCCACCTaGCCATCCGCCATGACTCCT +
Preference number: 4 (lower is better)
Translates to: GQGCKGAQQQGLGEDDLSSSSAT*PSAMTP
Trigger: AGGAGTCATGGCGGATGGTCAGGTGGCGGAACTGCT...GGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314606.9
ENST00000423140.6
CDS-3UTR TCA 90 bp GACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCCGCACGGGCGCTGGCTaGTGTGGTGTGGGTTCGCAG +
Preference number: 4 (lower is better)
Translates to: DNRWPTGLLRAHPHSRHTRTGAG*CGVGSQ
Trigger: CTGCGAACCCACACCACATCAGCCAGCGCCCGTGCG...GGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp GGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCCGGGCAGCAGCATCTCTaGACGGAAGACCCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: GQGCKGAQQQGLGEDDLSGQQHL*TEDPRV
Trigger: AACTCGGGGGTCTTCCGTCCAGAGATGCTGCTGCCC...GGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp CAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCACCTCGCCCAGCGCCTaGAGGCTCTTCACGGCGCCC +
Preference number: 4 (lower is better)
Translates to: QDNRRNLLPSPLSLGFWSTSPSA*RLFTAP
Trigger: GGGCGCCGTGAAGAGCCTTCAGGCGCTGGGCGAGGT...GGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp ATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACACTGGGAGCGGACCTTaGGCAGCGGGTGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: IGGPQVSSGPTLTVDTPHTGSGP*AAGEGG
Trigger: GCCACCTTCACCCGCTGCTCAAGGTCCGCTCCCAGT...GTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp AATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACGCACGGGCGCTGGCTaGTGTGGTGTGGGTTCGCAG +
Preference number: 4 (lower is better)
Translates to: NRWPTGLLRAHPHSRHTTRTGAG*CGVGSQ
Trigger: CTGCGAACCCACACCACATCAGCCAGCGCCCGTGCG...TGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp ATGACCGACACGTTCTCGGGAAGCCCCATGGGCAGCAGCATCTCTGGACGGAAGCCCAAGGTGAGACCATaGTCCGCCACCACGCCCTCG +
Preference number: 4 (lower is better)
Translates to: MTDTFSGSPMGSSISGRKPKVRP*SATTPS
Trigger: CGAGGGCGTGGTGGCGGATCATGGTCTCACCTTGGG...CTTCCGTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGAACGTGTCGGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR TCA 90 bp GCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCCTAGAGGCCCCAGGCAATaGCCGACACGTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: ARDAKERSSRDSGRMTCPRGPRQ*PTRSRE
Trigger: TTCCCGAGAACGTGTCGGTCATTGCCTGGGGCCTCT...AGGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp GAAGAACTCCCGCAGAACGCCCATGAGGTGGCCCAAGGTGAGACCATGATCCGCGGGACTCGGGGAGGATaGCCTGTCCTAGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: EELPQNAHEVAQGETMIRGTRGG*PVLEWP
Trigger: GGGCCACTCTAGGACAGGTCATCCTCCCCGAGTCCC...GCGGATCATGGTCTCACCTTGGGCCACCTCATGGGCGTTCTGCGGGAGTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR GCA 90 bp GACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCCACGGGCCTCATGGCTaGCCTCCCGGGCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: DNRWPTGLLRAHPHSRHTHGPHG*PPGQSP
Trigger: AGGAGATTGCCCGGGAGGGCAGCCATGAGGCCCGTG...GGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR GCA 90 bp CTGAGAGTGGGTCCGCTTGACCCGCTGGACATAGTCCATTGGGAGCTGCAGGGCAGCTGGAGCCGCCGCTaGACCTCATCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LRVGPLDPLDIVHWELQGSWSRR*TSSSML
Trigger: CAGCATGGAGGATGAGGTGCAGCGGCGGCTCCAGCT...GCCCTGCAGCTCCCAATGGACTATGTCCAGCGGGTCAAGCGGACCCACTCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR GCA 90 bp ATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACTGGTCACGGGCTGGGTaGTGCTGGGGCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IGGPQVSSGPTLTVDTPHWSRAG*CWGWKR
Trigger: CCTCTTCCAGCCCCAGCAGCACCCAGCCCGTGACCA...GTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR GCA 90 bp CAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGAAGGAAGAAGGTGTCGTaGTGGTCACGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: QGHWPGMQRSAAAGTRGGRKKVS*WSRAGC
Trigger: GCACCCAGCCCGTGACCAGCACGACACCTTCTTCCT...TCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp CAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGGAACTCAGCCAGGTaGGTGGCGTCCAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: QGHWPGMQRSAAAGTRGGWNSAR*VASRVS
Trigger: TGAGACCCTGGACGCCACGCACCTGGCTGAGTTCCA...TCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp AATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACAGCGCCCACCACCGCCTaGTGCTCCATGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: NRWPTGLLRAHPHSRHTTAPTTA*CSMPSS
Trigger: TGAGCTGGGCATGGAGCACCAGGCGGTGGTGGGCGC...TGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp ACCACGCCCTCGATCTGGTGGAACTCAGCCAGGTGCGTGGCGTCCAGGGTCTCAGGGCGCTGGCTGATGTaGTGTGGGTTCGCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: TTPSIWWNSARCVASRVSGRWLM*CGFAVG
Trigger: ACCTACTGCGAACCCACACCACATCAGCCAGCGCCC...TGAGACCCTGGACGCCACGCACCTGGCTGAGTTCCACCAGATCGAGGGCGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp GTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACACTCAGCCAGGTGCGTaGCGTCCAGGGTCTCATTCC +
Preference number: 4 (lower is better)
Translates to: VTGQGCKGAQQQGLGEDDTQPGA*RPGSHS
Trigger: GGAATGAGACCCTGGACGCCACGCACCTGGCTGAGT...GTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGAACGCCCTCGATCTGGTaGAACTCAGCCAGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: QGHWPGMQRSAAAGTRGGTPSIW*NSARCV
Trigger: CACGCACCTGGCTGAGTTCCACCAGATCGAGGGCGT...TCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGAACCACGCCCTCGATCTaGTGGAACTCAGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QGHWPGMQRSAAAGTRGGTTPSI*WNSARC
Trigger: GCACCTGGCTGAGTTCCACCAGATCGAGGGCGTGGT...TCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCCTTCTCGGGAAGCCCCATaGGCAGCAGCATCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: ARDAKERSSRDSGRMTCPSREAP*AAASLD
Trigger: GTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGA...AGGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCACGCAGCCTCCTGTGTaGGAGGGGGCCTCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRATQPPV*EGASAR
Trigger: CCGAGCCGAGGCCCCCTCCCACACAGGAGGCTGCGT...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp GTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACGAGGAAGGTGGGGGCTaGCCTCACAGAGGCCTCATA +
Preference number: 4 (lower is better)
Translates to: VTGQGCKGAQQQGLGEDDEEGGG*PHRGLI
Trigger: TATGAGGCCTCTGTGAGGCCAGCCCCCACCTTCCTC...GTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp TCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCACCTTGAGCAGCGGGTaGAGGTGGCCGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SSGPTLTVDTPHRTTEGTTLSSG*RWPLSG
Trigger: CCCCGACAGCGGCCACCTTCACCCGCTGCTCAAGGT...GGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp GTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACATACTTGTACCCCTGTaGGCCGTAGCCGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: VTGQGCKGAQQQGLGEDDILVPL*AVAALR
Trigger: TCTCAGGGCGGCTACGGCTCACAGGGGTACAAGTAT...GTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp ACCGACACGTTCTCGGGAAGCCCCATGGGCAGCAGCATCTCTGGACGGAAGACCCATCTCGGTGAACCTTaGGCAGCGGGTGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TDTFSGSPMGSSISGRKTHLGEP*AAGEGG
Trigger: GCCACCTTCACCCGCTGCTCAAGGTTCACCGAGATG...GGTCTTCCGTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGAACGTGTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR GCA 90 bp ACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACCGCCTGGTGCTCCATaGCCAGCTCAGCCGCCAACT +
Preference number: 4 (lower is better)
Translates to: TIGGPQVSSGPTLTVDTPPPGAP*PAQPPT
Trigger: AGTTGGCGGCTGAGCTGGGCATGGAGCACCAGGCGG...TGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR GCA 90 bp CCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACACACGGGCCTCATGGCTaGCCTCCCGGGCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: PQVSSGPTLTVDTPHRTTHGPHG*PPGQSP
Trigger: AGGAGATTGCCCGGGAGGGCAGCCATGAGGCCCGTG...TGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR GCA 90 bp AATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACACGGGCCTCATGGCTaGCCTCCCGGGCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: NRWPTGLLRAHPHSRHTTHGPHG*PPGQSP
Trigger: AGGAGATTGCCCGGGAGGGCAGCCATGAGGCCCGTG...TGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR GCA 90 bp CTCGGCTCGGCATCCAGGCGGCACAGGGGACTGTCATACACCATCTGCAGGTTCGGCCCTCTGGGGGAATaGTTCGAAACACACGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGSASRRHRGLSYTICRFGPLGE*FETHGP
Trigger: AGGCCCGTGTGTTTCGAAGCATTCCCCCAGAGGGCC...GAACCTGCAGATGGTGTATGACAGTCCCCTGTGCCGCCTGGATGCCGAGCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp GGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGCGCCCACCACCGCCTaGTGCTCCATGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GLINTRSLARDAKERSSRAPTTA*CSMPSS
Trigger: TGAGCTGGGCATGGAGCACCAGGCGGTGGTGGGCGC...CCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCCTCCCGCCAAGAGCCACTaGAGATCATCTCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ARDAKERSSRDSGRMTCPPAKSH*RSSLGS
Trigger: TGAGCCCAGAGATGATCTCCAGTGGCTCTTGGCGGG...AGGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CCGACACGTTCTCGGGAAGCCCCATGGGCAGCAGCATCTCTGGACGGAAGACCCCTGCAGGGCCTCCGCTaGATCTCGAAGGAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: PTRSREAPWAAASLDGRPLQGLR*ISKEEG
Trigger: ACCTTCTTCCTTCGAGATCCAGCGGAGGCCCTGCAG...GGGTCTTCCGTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGAACGTGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp CTCGGCTCGGCATCCAGGCGGCACAGGGGACTGTCATACACCATCTGCAGGTTCACTCAGCCAGGTGCGTaGCGTCCAGGGTCTCATTCC +
Preference number: 4 (lower is better)
Translates to: LGSASRRHRGLSYTICRFTQPGA*RPGSHS
Trigger: GGAATGAGACCCTGGACGCCACGCACCTGGCTGAGT...GAACCTGCAGATGGTGTATGACAGTCCCCTGTGCCGCCTGGATGCCGAGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp CCTCGGCTCGGCATCCAGGCGGCACAGGGGACTGTCATACACCATCTGCAGGTTTCTCGGGAAGCCCCATaGGCAGCAGCATCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: PRLGIQAAQGTVIHHLQVSREAP*AAASLD
Trigger: GTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGA...AACCTGCAGATGGTGTATGACAGTCCCCTGTGCCGCCTGGATGCCGAGCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp GTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACTGCAGGTTCACCTTGTaGCCCACCAGCTCCCGGATA +
Preference number: 4 (lower is better)
Translates to: VTGQGCKGAQQQGLGEDDCRFTL*PTSSRI
Trigger: TATCCGGGAGCTGGTGGGCCACAAGGTGAACCTGCA...GTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCACGCAGCCTCCTGTGTaGGAGGGGGCCTCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: HKYKVTGQGCKGAQQQGLTQPPV*EGASAR
Trigger: CCGAGCCGAGGCCCCCTCCCACACAGGAGGCTGCGT...GAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp ATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAAGCAGTTCCGCCACCTaGCCATCCGCCATGACTCCT +
Preference number: 4 (lower is better)
Translates to: IQGHWPGMQRSAAAGTRGSSSAT*PSAMTP
Trigger: AGGAGTCATGGCGGATGGTCAGGTGGCGGAACTGCT...TCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314606.9
ENST00000423140.6
CDS-3UTR TCA 90 bp ATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGAAGTTGTAGGGCTTaGAGGGCCGGTCCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: IGGPQVSSGPTLTVDTPHRSCRA*RAGPAK
Trigger: CTTGGCGGGACCGGCCCTTCAAGCCCTACAACTTCT...GTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp GACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCAGAAGTTGTAGGGCTTaGAGGGCCGGTCCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: DNRWPTGLLRAHPHSRHTRSCRA*RAGPAK
Trigger: CTTGGCGGGACCGGCCCTTCAAGCCCTACAACTTCT...GGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp CCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAACCTTGAGCAGCGGGTaGAGGTGGCCGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PTLTVDTPHRTTEGTCYPTLSSG*RWPLSG
Trigger: CCCCGACAGCGGCCACCTTCACCCGCTGCTCAAGGT...TGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp AGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCACCTTGAGCAGCGGGTaGAGGTGGCCGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: RGLINTRSLARDAKERSSTLSSG*RWPLSG
Trigger: CCCCGACAGCGGCCACCTTCACCCGCTGCTCAAGGT...GCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp GACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCGAGAGTGGGTCCGCTTaGCCCGCTGGACATAGTCCA +
Preference number: 4 (lower is better)
Translates to: DNRWPTGLLRAHPHSRHTESGSA*PAGHSP
Trigger: TGGACTATGTCCAGCGGGTCAAGCGGACCCACTCTC...GGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp ACCGACACGTTCTCGGGAAGCCCCATGGGCAGCAGCATCTCTGGACGGAAGACCATACTTGTACCCCTGTaGGCCGTAGCCGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: TDTFSGSPMGSSISGRKTILVPL*AVAALR
Trigger: TCTCAGGGCGGCTACGGCTCACAGGGGTACAAGTAT...GGTCTTCCGTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGAACGTGTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR TCA 90 bp CATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCCGCACGGGCGCTGGCTaGTGTGGTGTGGGTTCGCAG +
Preference number: 4 (lower is better)
Translates to: HKYKVTGQGCKGAQQQGLRTGAG*CGVGSQ
Trigger: CTGCGAACCCACACCACATCAGCCAGCGCCCGTGCG...GAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp GCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCCCCAAGGTGAGACCATaGTCCGCCACCACGCCCTCG +
Preference number: 4 (lower is better)
Translates to: AHPHSRHTTQDNRRNLLPPKVRP*SATTPS
Trigger: CGAGGGCGTGGTGGCGGATCATGGTCTCACCTTGGG...GGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp TCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCGGGACTCGGGGAGGATaGCCTGTCCTAGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SSGPTLTVDTPHRTTEGTGTRGG*PVLEWP
Trigger: GGGCCACTCTAGGACAGGTCATCCTCCCCGAGTCCC...GGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR GCA 90 bp GCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCCCGCCTGGTGCTCCATaGCCAGCTCAGCCGCCAACT +
Preference number: 4 (lower is better)
Translates to: AHPHSRHTTQDNRRNLLPPPGAP*PAQPPT
Trigger: AGTTGGCGGCTGAGCTGGGCATGGAGCACCAGGCGG...GGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp CAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGAGCACCTCATCCTCCATaGTGTCCACCACTCGGAACA +
Preference number: 4 (lower is better)
Translates to: QGHWPGMQRSAAAGTRGGAPHPP*CPPLGT
Trigger: TGTTCCGAGTGGTGGACAGCATGGAGGATGAGGTGC...TCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp GAAGAACTCCCGCAGAACGCCCATGAGGTGGCCCAAGGTGAGACCATGATCCGCAGGAAGAAGGTGTCGTaGTGGTCACGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: EELPQNAHEVAQGETMIRRKKVS*WSRAGC
Trigger: GCACCCAGCCCGTGACCAGCACGACACCTTCTTCCT...GCGGATCATGGTCTCACCTTGGGCCACCTCATGGGCGTTCTGCGGGAGTTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp CATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGCGCCCACCACCGCCTaGTGCTCCATGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: HKYKVTGQGCKGAQQQGLAPTTA*CSMPSS
Trigger: TGAGCTGGGCATGGAGCACCAGGCGGTGGTGGGCGC...GAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp ACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCAAACACACGGGCCTCATaGCTGCCCTCCCGGGCAATC +
Preference number: 4 (lower is better)
Translates to: TIGGPQVSSGPTLTVDTPNTRAS*LPSRAI
Trigger: GATTGCCCGGGAGGGCAGCCATGAGGCCCGTGTGTT...TGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp ATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACCTGGGCCAGGCCCTCTaGGGGAATGCTTCGAAACAC +
Preference number: 4 (lower is better)
Translates to: IGGPQVSSGPTLTVDTPHLGQAL*GNASKH
Trigger: GTGTTTCGAAGCATTCCCCCAGAGGGCCTGGCCCAG...GTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp GTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACAAGATCTGTCGGAACTaGGAGCGGACCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VTGQGCKGAQQQGLGEDDKICRN*ERTLSS
Trigger: GCTGCTCAAGGTCCGCTCCCAGTTCCGACAGATCTT...GTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp ATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACGGGTGCTGCTGGGGCTaGAAGAGGGCGTCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: IGGPQVSSGPTLTVDTPHGCCWG*KRASKF
Trigger: GAACTTTGACGCCCTCTTCCAGCCCCAGCAGCACCC...GTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp ACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGGTGCTGGTCACGGGCTaGGTGCTGCTGGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TTEGTCYPVLCPWDSGPGVLVTG*VLLGLE
Trigger: TTCCAGCCCCAGCAGCACCCAGCCCGTGACCAGCAC...CCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp ATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACGGGCGCTGGCTGATGTaGTGTGGGTTCGCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: IGGPQVSSGPTLTVDTPHGRWLM*CGFAVG
Trigger: ACCTACTGCGAACCCACACCACATCAGCCAGCGCCC...GTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp CTTGACCCGCTGGACATAGTCCATTGGGAGCTGCAGGGCCTCCGCTGGATCTCGTGCAGGTTCACCTTGTaGCCCACCAGCTCCCGGATA +
Preference number: 4 (lower is better)
Translates to: LDPLDIVHWELQGLRWISCRFTL*PTSSRI
Trigger: TATCCGGGAGCTGGTGGGCCACAAGGTGAACCTGCA...CGAGATCCAGCGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAGCGGGTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp GCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCCTCTGGGATTCTGGTCCTaGGACAGGTGGGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: ARDAKERSSRDSGRMTCPLGFWS*DRWERG
Trigger: TCCTCTTTCCCACCTGTCCCAGGACCAGAATCCCAG...AGGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp ATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACTGGACATGGCCTTGCTaGAGCCCACTTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: IGGPQVSSGPTLTVDTPHWTWPC*SPLCHW
Trigger: CCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCA...GTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp CAGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCCCAAGGTGAGACCATaGTCCGCCACCACGCCCTCG +
Preference number: 4 (lower is better)
Translates to: QRPHKYKVTGQGCKGAQQPKVRP*SATTPS
Trigger: CGAGGGCGTGGTGGCGGATCATGGTCTCACCTTGGG...CTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp CTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACGGGACTCGGGGAGGATaGCCTGTCCTAGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LINTRSLARDAKERSSRDGTRGG*PVLEWP
Trigger: GGGCCACTCTAGGACAGGTCATCCTCCCCGAGTCCC...GTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp CATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCCCGCCTGGTGCTCCATaGCCAGCTCAGCCGCCAACT +
Preference number: 4 (lower is better)
Translates to: HKYKVTGQGCKGAQQQGLPPGAP*PAQPPT
Trigger: AGTTGGCGGCTGAGCTGGGCATGGAGCACCAGGCGG...GAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCAGCTGGAGCCGCCGCTaGACCTCATCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRASWSRR*TSSSML
Trigger: CAGCATGGAGGATGAGGTGCAGCGGCGGCTCCAGCT...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR GCA 90 bp AACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACAGCTGGAGCCGCCGCTaGACCTCATCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: NRRNLLPSPLSLGFWSWDSWSRR*TSSSML
Trigger: CAGCATGGAGGATGAGGTGCAGCGGCGGCTCCAGCT...GTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp CCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCATGGTCACGGGCTGGGTaGTGCTGGGGCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PTLTVDTPHRTTEGTCYPWSRAG*CWGWKR
Trigger: CCTCTTCCAGCCCCAGCAGCACCCAGCCCGTGACCA...TGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp AGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCTGGTCACGGGCTGGGTaGTGCTGGGGCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RGLINTRSLARDAKERSSWSRAG*CWGWKR
Trigger: CCTCTTCCAGCCCCAGCAGCACCCAGCCCGTGACCA...GCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp CATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCTGGTCACGGGCTGGGTaGTGCTGGGGCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HKYKVTGQGCKGAQQQGLWSRAG*CWGWKR
Trigger: CCTCTTCCAGCCCCAGCAGCACCCAGCCCGTGACCA...GAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp CAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGAACAACAGAAGGAACCTaGTACCCAGTCCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QGHWPGMQRSAAAGTRGGTTEGT*YPVLCP
Trigger: GGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT...TCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGAACACACGGGCCTCATaGCTGCCCTCCCGGGCAATC +
Preference number: 4 (lower is better)
Translates to: GLINTRSLARDAKERSSRNTRAS*LPSRAI
Trigger: GATTGCCCGGGAGGGCAGCCATGAGGCCCGTGTGTT...CCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGCGCATAAGCTCGCTCTaGGCCAGGCCCTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: HTGQQKEPATQSSVPGILRISSL*ARPSGG
Trigger: TCCCCCAGAGGGCCTGGCCCAGAGCGAGCTTATGCG...CAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GATGTGGTGTGGGTTCGCAGTAGGTTTTTCCGGGCCTCGTCCAGCTTCCAGTTAGTGCTGGTCACGGGCTaGGTGCTGCTGGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: DVVWVRSRFFRASSSFQLVLVTG*VLLGLE
Trigger: TTCCAGCCCCAGCAGCACCCAGCCCGTGACCAGCAC...TAACTGGAAGCTGGACGAGGCCCGGAAAAACCTACTGCGAACCCACACCACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp ACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCGTGCTGGTCACGGGCTaGGTGCTGCTGGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TGQQKEPATQSSVPGILVVLVTG*VLLGLE
Trigger: TTCCAGCCCCAGCAGCACCCAGCCCGTGACCAGCAC...GACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp AATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACTGGACATAGTCCATTaGGAGCTGCAGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: NRWPTGLLRAHPHSRHTTLDIVH*ELQGLR
Trigger: GCGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAG...TGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp GGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCCCTGGCTGATGTGGTGTaGGTTCGCAGTAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: GQGCKGAQQQGLGEDDLSLADVV*VRSRFF
Trigger: GAAAAACCTACTGCGAACCCACACCACATCAGCCAG...GGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp TCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCAGAGCGCACGGGCGCTaGCTGATGTGGTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SSGPTLTVDTPHRTTEGTRAHGR*LMWCGF
Trigger: GAACCCACACCACATCAGCCAGCGCCCGTGCGCTCT...GGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp GCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGAGCGCACGGGCGCTaGCTGATGTGGTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: AHPHSRHTTQDNRRNLLPRAHGR*LMWCGF
Trigger: GAACCCACACCACATCAGCCAGCGCCCGTGCGCTCT...GGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp ACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTACGCAGCCTCCTGTGTaGGAGGGGGCCTCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: TVDTPHRTTEGTCYPVLCTQPPV*EGASAR
Trigger: CCGAGCCGAGGCCCCCTCCCACACAGGAGGCTGCGT...ACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAGGAAGGTGGGGGCTaGCCTCACAGAGGCCTCATA +
Preference number: 4 (lower is better)
Translates to: PQVSSGPTLTVDTPHRTTEEGGG*PHRGLI
Trigger: TATGAGGCCTCTGTGAGGCCAGCCCCCACCTTCCTC...TGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp ACTCAGCCAGGTGCGTGGCGTCCAGGGTCTCATTCCGGAATACGCGGTCGATGGCTGGGATTCTGGTCCTaGGACAGGTGGGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: TQPGAWRPGSHSGIRGRWLGFWS*DRWERG
Trigger: TCCTCTTTCCCACCTGTCCCAGGACCAGAATCCCAG...CCATCGACCGCGTATTCCGGAATGAGACCCTGGACGCCACGCACCTGGCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR TCA 90 bp ACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCATGGACATGGCCTTGCTaGAGCCCACTTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: TIGGPQVSSGPTLTVDTPWTWPC*SPLCHW
Trigger: CCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCA...TGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp AACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACAGAAGTTGTAGGGCTTaGAGGGCCGGTCCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: NRRNLLPSPLSLGFWSWDRSCRA*RAGPAK
Trigger: CTTGGCGGGACCGGCCCTTCAAGCCCTACAACTTCT...GTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp TCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCGAGAGTGGGTCCGCTTaGCCCGCTGGACATAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSGPTLTVDTPHRTTEGTESGSA*PAGHSP
Trigger: TGGACTATGTCCAGCGGGTCAAGCGGACCCACTCTC...GGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp AACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACGAGAGTGGGTCCGCTTaGCCCGCTGGACATAGTCCA +
Preference number: 4 (lower is better)
Translates to: NRRNLLPSPLSLGFWSWDESGSA*PAGHSP
Trigger: TGGACTATGTCCAGCGGGTCAAGCGGACCCACTCTC...GTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp ACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTCCCAAGGTGAGACCATaGTCCGCCACCACGCCCTCG +
Preference number: 4 (lower is better)
Translates to: TLLDNRWPTGLLRAHPHSPKVRP*SATTPS
Trigger: CGAGGGCGTGGTGGCGGATCATGGTCTCACCTTGGG...ACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp GGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGAGAGGCCCCAGGCAATaGCCGACACGTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: GLINTRSLARDAKERSSRRGPRQ*PTRSRE
Trigger: TTCCCGAGAACGTGTCGGTCATTGCCTGGGGCCTCT...CCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp ACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGAGAGGCCCCAGGCAATaGCCGACACGTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: TTEGTCYPVLCPWDSGPGRGPRQ*PTRSRE
Trigger: TTCCCGAGAACGTGTCGGTCATTGCCTGGGGCCTCT...CCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCTTCGAGCGGGCTGTGTaGCCTTGGACTTCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRAFERAV*PWTSPS
Trigger: AGACGGGGAAGTCCAAGGTCACACAGCCCGCTCGAA...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS-3UTR GCA 90 bp AATACGCGGTCGATGGAGAAGTACTTGACCGGAGTGAAGGGCTTCTTCTGGGCACACGGGCCTCATGGCTaGCCTCCCGGGCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: NTRSMEKYLTGVKGFFWAHGPHG*PPGQSP
Trigger: AGGAGATTGCCCGGGAGGGCAGCCATGAGGCCCGTG...TGCCCAGAAGAAGCCCTTCACTCCGGTCAAGTACTTCTCCATCGACCGCGTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR GCA 90 bp CTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTGGCCCTCTGGGGGAATaGTTCGAAACACACGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPTLLDNRWPTGLLRAHPGPLGE*FETHGP
Trigger: AGGCCCGTGTGTTTCGAAGCATTCCCCCAGAGGGCC...AGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR GCA 90 bp CACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGAGCTGGAGCCGCCGCTaGACCTCATCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: HTGQQKEPATQSSVPGILSWSRR*TSSSML
Trigger: CAGCATGGAGGATGAGGTGCAGCGGCGGCTCCAGCT...CAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp TCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGGAACTCAGCCAGGTaGGTGGCGTCCAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SSGPTLTVDTPHRTTEGTWNSAR*VASRVS
Trigger: TGAGACCCTGGACGCCACGCACCTGGCTGAGTTCCA...GGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp CAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCCTGGGCCAGGCCCTCTaGGGGAATGCTTCGAAACAC +
Preference number: 4 (lower is better)
Translates to: QDNRRNLLPSPLSLGFWSLGQAL*GNASKH
Trigger: GTGTTTCGAAGCATTCCCCCAGAGGGCCTGGCCCAG...GGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp AGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCGCATAAGCTCGCTCTaGGCCAGGCCCTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SRHTTQDNRRNLLPSPLSRISSL*ARPSGG
Trigger: TCCCCCAGAGGGCCTGGCCCAGAGCGAGCTTATGCG...GGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGAACTGGAGATCATCTCTaGGCTCAGCTCTGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: QGHWPGMQRSAAAGTRGGTGDHL*AQLCLL
Trigger: CAAGAGACAGAGCTGAGCCCAGAGATGATCTCCAGT...TCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCGGGTGCTGCTGGGGCTaGAAGAGGGCGTCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRAGCCWG*KRASKF
Trigger: GAACTTTGACGCCCTCTTCCAGCCCCAGCAGCACCC...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp CTCCATGCTGGGCTCTGTGTATGGGTTGTAGGCTGGCTTGAAGCGGAGTTGCGTAAGAAGGTGTCGTGCTaGTCACGGGCTGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LHAGLCVWVVGWLEAELRKKVSC*SRAGCC
Trigger: GCAGCACCCAGCCCGTGACCAGCACGACACCTTCTT...ACGCAACTCCGCTTCAAGCCAGCCTACAACCCATACACAGAGCCCAGCATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp ACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGAAGAAGGTGTCGTGCTaGTCACGGGCTGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TTEGTCYPVLCPWDSGPGKKVSC*SRAGCC
Trigger: GCAGCACCCAGCCCGTGACCAGCACGACACCTTCTT...CCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCCTCTGGCTGATGTGGTGTaGGTTCGCAGTAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ARDAKERSSRDSGRMTCPLADVV*VRSRFF
Trigger: GAAAAACCTACTGCGAACCCACACCACATCAGCCAG...AGGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp TCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCGGGCGCTGGCTGATGTaGTGTGGGTTCGCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SGPTLTVDTPHRTTEGTCGRWLM*CGFAVG
Trigger: ACCTACTGCGAACCCACACCACATCAGCCAGCGCCC...GCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp AGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGAGCGCACGGGCGCTaGCTGATGTGGTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: RGLINTRSLARDAKERSSRAHGR*LMWCGF
Trigger: GAACCCACACCACATCAGCCAGCGCCCGTGCGCTCT...GCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTACTCAGCCAGGTGCGTaGCGTCCAGGGTCTCATTCC +
Preference number: 4 (lower is better)
Translates to: LPTLLDNRWPTGLLRAHPTQPGA*RPGSHS
Trigger: GGAATGAGACCCTGGACGCCACGCACCTGGCTGAGT...AGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp ACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACTCAGCCAGGTGCGTaGCGTCCAGGGTCTCATTCC +
Preference number: 4 (lower is better)
Translates to: TTEGTCYPVLCPWDSGPGTQPGA*RPGSHS
Trigger: GGAATGAGACCCTGGACGCCACGCACCTGGCTGAGT...CCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp AACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACACGCCCTCGATCTGGTaGAACTCAGCCAGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: NRRNLLPSPLSLGFWSWDTPSIW*NSARCV
Trigger: CACGCACCTGGCTGAGTTCCACCAGATCGAGGGCGT...GTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp ACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACGCCCTCGATCTGGTaGAACTCAGCCAGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: TTEGTCYPVLCPWDSGPGTPSIW*NSARCV
Trigger: CACGCACCTGGCTGAGTTCCACCAGATCGAGGGCGT...CCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp TCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCACCACGCCCTCGATCTaGTGGAACTCAGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SGPTLTVDTPHRTTEGTCTTPSI*WNSARC
Trigger: GCACCTGGCTGAGTTCCACCAGATCGAGGGCGTGGT...GCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp TCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCACCACGCCCTCGATCTaGTGGAACTCAGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SSGPTLTVDTPHRTTEGTTTPSI*WNSARC
Trigger: GCACCTGGCTGAGTTCCACCAGATCGAGGGCGTGGT...GGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp CTTGACCCGCTGGACATAGTCCATTGGGAGCTGCAGGGCCTCCGCTGGATCTCGGCTGGGCTCTGTGTATaGGTTGTAGGCTGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: LDPLDIVHWELQGLRWISAGLCV*VVGWLE
Trigger: TTCAAGCCAGCCTACAACCCATACACAGAGCCCAGC...CGAGATCCAGCGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAGCGGGTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp CTCCATGCTGGGCTCTGTGTATGGGTTGTAGGCTGGCTTGAAGCGGAGTTGCGTGGGCAGCAGCATCTCTaGACGGAAGACCCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: LHAGLCVWVVGWLEAELRGQQHL*TEDPRV
Trigger: AACTCGGGGGTCTTCCGTCCAGAGATGCTGCTGCCC...ACGCAACTCCGCTTCAAGCCAGCCTACAACCCATACACAGAGCCCAGCATGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp ACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGTCTCGGGAAGCCCCATaGGCAGCAGCATCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: TTEGTCYPVLCPWDSGPGSREAP*AAASLD
Trigger: GTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGA...CCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp AACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACTCTCGGGAAGCCCCATaGGCAGCAGCATCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: NRRNLLPSPLSLGFWSWDSREAP*AAASLD
Trigger: GTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGA...GTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CTGATGTGGTGTGGGTTCGCAGTAGGTTTTTCCGGGCCTCGTCCAGCTTCCAGTGAGGAAGGTGGGGGCTaGCCTCACAGAGGCCTCATA +
Preference number: 4 (lower is better)
Translates to: LMWCGFAVGFSGPRPASSEEGGG*PHRGLI
Trigger: TATGAGGCCTCTGTGAGGCCAGCCCCCACCTTCCTC...ACTGGAAGCTGGACGAGGCCCGGAAAAACCTACTGCGAACCCACACCACATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp CAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCGAGGAAGGTGGGGGCTaGCCTCACAGAGGCCTCATA +
Preference number: 4 (lower is better)
Translates to: QDNRRNLLPSPLSLGFWSEEGGG*PHRGLI
Trigger: TATGAGGCCTCTGTGAGGCCAGCCCCCACCTTCCTC...GGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp AATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACCAGTCCTCTGTCCCTaGGATTCTGGTCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: NRWPTGLLRAHPHSRHTTPVLCP*DSGPGT
Trigger: TGTCCCAGGACCAGAATCCCAGGGACAGAGGACTGG...TGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp AACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACTGGACATGGCCTTGCTaGAGCCCACTTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: NRRNLLPSPLSLGFWSWDWTWPC*SPLCHW
Trigger: CCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCA...GTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp CAGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGAGAAGTTGTAGGGCTTaGAGGGCCGGTCCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: QRPHKYKVTGQGCKGAQQRSCRA*RAGPAK
Trigger: CTTGGCGGGACCGGCCCTTCAAGCCCTACAACTTCT...CTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp ACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTACTGGGAGCGGACCTTaGGCAGCGGGTGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TVDTPHRTTEGTCYPVLCTGSGP*AAGEGG
Trigger: GCCACCTTCACCCGCTGCTCAAGGTCCGCTCCCAGT...ACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp AGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCGAGAGTGGGTCCGCTTaGCCCGCTGGACATAGTCCA +
Preference number: 4 (lower is better)
Translates to: RGLINTRSLARDAKERSSESGSA*PAGHSP
Trigger: TGGACTATGTCCAGCGGGTCAAGCGGACCCACTCTC...GCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCATACTTGTACCCCTGTaGGCCGTAGCCGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRAILVPL*AVAALR
Trigger: TCTCAGGGCGGCTACGGCTCACAGGGGTACAAGTAT...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp ACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCAGAGGCCCCAGGCAATaGCCGACACGTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: TGQQKEPATQSSVPGILVRGPRQ*PTRSRE
Trigger: TTCCCGAGAACGTGTCGGTCATTGCCTGGGGCCTCT...GACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp ATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGCAGTAAGCTCCCAGTaGTTGGTGGACCGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: IQGHWPGMQRSAAAGTRGAVSSQ*LVDRSS
Trigger: TGAACTTCGGTCCACCAAGCACTGGGAGCTTACTGC...TCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp GACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCGCAGTAAGCTCCCAGTaGTTGGTGGACCGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: DNRWPTGLLRAHPHSRHTAVSSQ*LVDRSS
Trigger: TGAACTTCGGTCCACCAAGCACTGGGAGCTTACTGC...GGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR GCA 90 bp CAGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGGGCCCTCTGGGGGAATaGTTCGAAACACACGGGCCT +
Preference number: 4 (lower is better)
Translates to: QRPHKYKVTGQGCKGAQQGPLGE*FETHGP
Trigger: AGGCCCGTGTGTTTCGAAGCATTCCCCCAGAGGGCC...CTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp ACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGCGGAGCCGCAAAAGGTaGATGGGACTCAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: TTEGTCYPVLCPWDSGPGRSRKR*MGLSSH
Trigger: GTGGGAACTGAGTCCCATGCACCTTTTGCGGCTCCG...CCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS-3UTR CCA 90 bp ACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAACACACGGGCCTCATaGCTGCCCTCCCGGGCAATC +
Preference number: 4 (lower is better)
Translates to: TLLDNRWPTGLLRAHPHSNTRAS*LPSRAI
Trigger: GATTGCCCGGGAGGGCAGCCATGAGGCCCGTGTGTT...ACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp TTCCGGAATACGCGGTCGATGGAGAAGTACTTGACCGGAGTGAAGGGCTTCTTCAACACACGGGCCTCATaGCTGCCCTCCCGGGCAATC +
Preference number: 4 (lower is better)
Translates to: FRNTRSMEKYLTGVKGFFNTRAS*LPSRAI
Trigger: GATTGCCCGGGAGGGCAGCCATGAGGCCCGTGTGTT...GAAGAAGCCCTTCACTCCGGTCAAGTACTTCTCCATCGACCGCGTATTCCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp CCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCACTGGGCCAGGCCCTCTaGGGGAATGCTTCGAAACAC +
Preference number: 4 (lower is better)
Translates to: PTLTVDTPHRTTEGTCYPLGQAL*GNASKH
Trigger: GTGTTTCGAAGCATTCCCCCAGAGGGCCTGGCCCAG...TGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCCTGGGCCAGGCCCTCTaGGGGAATGCTTCGAAACAC +
Preference number: 4 (lower is better)
Translates to: HKYKVTGQGCKGAQQQGLLGQAL*GNASKH
Trigger: GTGTTTCGAAGCATTCCCCCAGAGGGCCTGGCCCAG...GAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCCCCGCCAAGAGCCACTaGAGATCATCTCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: QDNRRNLLPSPLSLGFWSPAKSH*RSSLGS
Trigger: TGAGCCCAGAGATGATCTCCAGTGGCTCTTGGCGGG...GGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGGGTGCTGCTGGGGCTaGAAGAGGGCGTCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: PTLTVDTPHRTTEGTCYPGCCWG*KRASKF
Trigger: GAACTTTGACGCCCTCTTCCAGCCCCAGCAGCACCC...TGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CGGAATACGCGGTCGATGGAGAAGTACTTGACCGGAGTGAAGGGCTTCTTCTGGGGGTGCTGCTGGGGCTaGAAGAGGGCGTCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: RNTRSMEKYLTGVKGFFWGCCWG*KRASKF
Trigger: GAACTTTGACGCCCTCTTCCAGCCCCAGCAGCACCC...CCAGAAGAAGCCCTTCACTCCGGTCAAGTACTTCTCCATCGACCGCGTATTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp CACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGAAGAAGGTGTCGTGCTaGTCACGGGCTGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HTGQQKEPATQSSVPGILKKVSC*SRAGCC
Trigger: GCAGCACCCAGCCCGTGACCAGCACGACACCTTCTT...CAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCAAGAAGGTGTCGTGCTaGTCACGGGCTGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HKYKVTGQGCKGAQQQGLKKVSC*SRAGCC
Trigger: GCAGCACCCAGCCCGTGACCAGCACGACACCTTCTT...GAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGCTGCAGGGCCTCCGCTaGATCTCGAAGGAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: GLINTRSLARDAKERSSRLQGLR*ISKEEG
Trigger: ACCTTCTTCCTTCGAGATCCAGCGGAGGCCCTGCAG...CCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp TCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCCTGCAGGGCCTCCGCTaGATCTCGAAGGAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: SSGPTLTVDTPHRTTEGTLQGLR*ISKEEG
Trigger: ACCTTCTTCCTTCGAGATCCAGCGGAGGCCCTGCAG...GGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp CATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCCTGGACATAGTCCATTaGGAGCTGCAGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: HKYKVTGQGCKGAQQQGLLDIVH*ELQGLR
Trigger: GCGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAG...GAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp ACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGACATAGTCCATTaGGAGCTGCAGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: TGQQKEPATQSSVPGILVLDIVH*ELQGLR
Trigger: GCGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAG...GACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACGGGCGCTGGCTGATGTaGTGTGGGTTCGCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: LINTRSLARDAKERSSRDGRWLM*CGFAVG
Trigger: ACCTACTGCGAACCCACACCACATCAGCCAGCGCCC...GTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp AGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCGGGCAGCAGCATCTCTaGACGGAAGACCCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: RGLINTRSLARDAKERSSGQQHL*TEDPRV
Trigger: AACTCGGGGGTCTTCCGTCCAGAGATGCTGCTGCCC...GCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCTGCAGGTTCACCTTGTaGCCCACCAGCTCCCGGATA +
Preference number: 4 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRACRFTL*PTSSRI
Trigger: TATCCGGGAGCTGGTGGGCCACAAGGTGAACCTGCA...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp CCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACACTGGGATTCTGGTCCTaGGACAGGTGGGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PQVSSGPTLTVDTPHRTTLGFWS*DRWERG
Trigger: TCCTCTTTCCCACCTGTCCCAGGACCAGAATCCCAG...TGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp TCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCCCAGTCCTCTGTCCCTaGGATTCTGGTCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: SGPTLTVDTPHRTTEGTCPVLCP*DSGPGT
Trigger: TGTCCCAGGACCAGAATCCCAGGGACAGAGGACTGG...GCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp CAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCCCAGTCCTCTGTCCCTaGGATTCTGGTCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: QDNRRNLLPSPLSLGFWSPVLCP*DSGPGT
Trigger: TGTCCCAGGACCAGAATCCCAGGGACAGAGGACTGG...GGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
3UTR CAA 72 bp TGGCCCACCAGCTCCCGGATATTGTTGATGCCATATTaGATCATCGTTGGGCGCTCCAGGGAGAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: WPTSSRILLMPY*IIVGRSRERPQ
Trigger: CTGGGGCCTCTCCCTGGAGCGCCCAACGATGATCAAATATGGCATCAACAATATCCGGGAGCTGGTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR TCA 90 bp CGGAATACGCGGTCGATGGAGAAGTACTTGACCGGAGTGAAGGGCTTCTTCTGGTGGACATGGCCTTGCTaGAGCCCACTTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: RNTRSMEKYLTGVKGFFWWTWPC*SPLCHW
Trigger: CCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCA...CCAGAAGAAGCCCTTCACTCCGGTCAAGTACTTCTCCATCGACCGCGTATTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR TCA 90 bp ACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCATACTTGTACCCCTGTaGGCCGTAGCCGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: TGQQKEPATQSSVPGILVILVPL*AVAALR
Trigger: TCTCAGGGCGGCTACGGCTCACAGGGGTACAAGTAT...GACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp TGGGGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGAATGTGTCGTCATCTTaGGTGTGGCGACGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: WGQLPTLLDNRWPTGLLRNVSSS*VWRRSR
Trigger: GCGGCTCCGTCGCCACACTCAAGATGACGACACATT...CCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS-3UTR GCA 90 bp ACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTGGCCCTCTGGGGGAATaGTTCGAAACACACGGGCCT +
Preference number: 4 (lower is better)
Translates to: TLLDNRWPTGLLRAHPHSGPLGE*FETHGP
Trigger: AGGCCCGTGTGTTTCGAAGCATTCCCCCAGAGGGCC...ACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR GCA 90 bp CAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCGCACCTCATCCTCCATaGTGTCCACCACTCGGAACA +
Preference number: 4 (lower is better)
Translates to: QDNRRNLLPSPLSLGFWSAPHPP*CPPLGT
Trigger: TGTTCCGAGTGGTGGACAGCATGGAGGATGAGGTGC...GGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp AGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCAGGAAGAAGGTGTCGTaGTGGTCACGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SRHTTQDNRRNLLPSPLSRKKVS*WSRAGC
Trigger: GCACCCAGCCCGTGACCAGCACGACACCTTCTTCCT...GGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp CTGCTGGGGCTGGAAGAGGGCGTCAAAGTTCCAGAAGGAGCTCTCAATGAAGTTTGGAACTCAGCCAGGTaGGTGGCGTCCAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LLGLEEGVKVPEGALNEVWNSAR*VASRVS
Trigger: TGAGACCCTGGACGCCACGCACCTGGCTGAGTTCCA...AACTTCATTGAGAGCTCCTTCTGGAACTTTGACGCCCTCTTCCAGCCCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR GCA 90 bp AGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCTGGAACTCAGCCAGGTaGGTGGCGTCCAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SRHTTQDNRRNLLPSPLSWNSAR*VASRVS
Trigger: TGAGACCCTGGACGCCACGCACCTGGCTGAGTTCCA...GGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp TCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCGGCTTGAAGCGGAGTTaGGTGATACCCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SGPTLTVDTPHRTTEGTCGLKRS*VIPSLV
Trigger: CACCAAGCTGGGTATCACGCAACTCCGCTTCAAGCC...GCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR GCA 90 bp AATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACAACAACAGAAGGAACCTaGTACCCAGTCCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: NRWPTGLLRAHPHSRHTTTTEGT*YPVLCP
Trigger: GGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT...TGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp ACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCGCTCCCAGTGCTTGGTaGACCGAAGTTCAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: TGQQKEPATQSSVPGILVAPSAW*TEVQPR
Trigger: TCGAGGCTGAACTTCGGTCCACCAAGCACTGGGAGC...GACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp CTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTAAGATCTGTCGGAACTaGGAGCGGACCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LPTLLDNRWPTGLLRAHPKICRN*ERTLSS
Trigger: GCTGCTCAAGGTCCGCTCCCAGTTCCGACAGATCTT...AGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp CAGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCTGCAGGGCCTCCGCTaGATCTCGAAGGAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: QRPHKYKVTGQGCKGAQQLQGLR*ISKEEG
Trigger: ACCTTCTTCCTTCGAGATCCAGCGGAGGCCCTGCAG...CTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp AGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGACATAGTCCATTaGGAGCTGCAGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: SRHTTQDNRRNLLPSPLSLDIVH*ELQGLR
Trigger: GCGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAG...GGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp ACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTACGCCCTCGATCTGGTaGAACTCAGCCAGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: TLLDNRWPTGLLRAHPHSTPSIW*NSARCV
Trigger: CACGCACCTGGCTGAGTTCCACCAGATCGAGGGCGT...ACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp ACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCTGCAGGTTCACCTTGTaGCCCACCAGCTCCCGGATA +
Preference number: 4 (lower is better)
Translates to: TGQQKEPATQSSVPGILVCRFTL*PTSSRI
Trigger: TATCCGGGAGCTGGTGGGCCACAAGGTGAACCTGCA...GACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCCTGGGATTCTGGTCCTaGGACAGGTGGGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: AHPHSRHTTQDNRRNLLPLGFWS*DRWERG
Trigger: TCCTCTTTCCCACCTGTCCCAGGACCAGAATCCCAG...GGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
3UTR CAA 72 bp GTCTCATTCCGGAATACGCGGTCGATGGAGAAGTACTaGACCGGAGTGAAGGGCTTCTTCTGGGCAAGGCGG +
Preference number: 4 (lower is better)
Translates to: VSFRNTRSMEKY*TGVKGFFWARR
Trigger: CCGCCTTGCCCAGAAGAAGCCCTTCACTCCGGTCAAGTACTTCTCCATCGACCGCGTATTCCGGAATGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR GCA 90 bp GGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGCAGTAAGCTCCCAGTaGTTGGTGGACCGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: GLINTRSLARDAKERSSRAVSSQ*LVDRSS
Trigger: TGAACTTCGGTCCACCAAGCACTGGGAGCTTACTGC...CCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp CACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGCACCTCATCCTCCATaGTGTCCACCACTCGGAACA +
Preference number: 4 (lower is better)
Translates to: HTGQQKEPATQSSVPGILAPHPP*CPPLGT
Trigger: TGTTCCGAGTGGTGGACAGCATGGAGGATGAGGTGC...CAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp ACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTAGGAAGAAGGTGTCGTaGTGGTCACGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: TVDTPHRTTEGTCYPVLCRKKVS*WSRAGC
Trigger: GCACCCAGCCCGTGACCAGCACGACACCTTCTTCCT...ACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp CACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGGCTTGAAGCGGAGTTaGGTGATACCCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HTGQQKEPATQSSVPGILGLKRS*VIPSLV
Trigger: CACCAAGCTGGGTATCACGCAACTCCGCTTCAAGCC...CAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCTGTCATACACCATCTaGAGGTTCACCTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRALSYTI*RFTLWP
Trigger: GGGCCACAAGGTGAACCTGCAGATGGTGTATGACAG...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR GCA 90 bp CAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCCTGTCATACACCATCTaGAGGTTCACCTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QDNRRNLLPSPLSLGFWSLSYTI*RFTLWP
Trigger: GGGCCACAAGGTGAACCTGCAGATGGTGTATGACAG...GGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp GCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCACAACAGAAGGAACCTaGTACCCAGTCCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AHPHSRHTTQDNRRNLLPTTEGT*YPVLCP
Trigger: GGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT...GGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp AACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACACAACAGAAGGAACCTaGTACCCAGTCCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: NRRNLLPSPLSLGFWSWDTTEGT*YPVLCP
Trigger: GGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT...GTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp AATGACCGACACGTTCTCGGGAAGCCCCATGGGCAGCAGCATCTCTGGACGGAAACTGGAGATCATCTCTaGGCTCAGCTCTGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: NDRHVLGKPHGQQHLWTETGDHL*AQLCLL
Trigger: CAAGAGACAGAGCTGAGCCCAGAGATGATCTCCAGT...TTCCGTCCAGAGATGCTGCTGCCCATGGGGCTTCCCGAGAACGTGTCGGTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp AGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCCCGCCAAGAGCCACTaGAGATCATCTCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SRHTTQDNRRNLLPSPLSPAKSH*RSSLGS
Trigger: TGAGCCCAGAGATGATCTCCAGTGGCTCTTGGCGGG...GGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCGCTGGGCTCTGTGTATaGGTTGTAGGCTGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: AHPHSRHTTQDNRRNLLPAGLCV*VVGWLE
Trigger: TTCAAGCCAGCCTACAACCCATACACAGAGCCCAGC...GGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCGCTGGGCTCTGTGTATaGGTTGTAGGCTGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRAAGLCV*VVGWLE
Trigger: TTCAAGCCAGCCTACAACCCATACACAGAGCCCAGC...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp ACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGGCTGGGCTCTGTGTATaGGTTGTAGGCTGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: TTEGTCYPVLCPWDSGPGAGLCV*VVGWLE
Trigger: TTCAAGCCAGCCTACAACCCATACACAGAGCCCAGC...CCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp TTCCGGAATACGCGGTCGATGGAGAAGTACTTGACCGGAGTGAAGGGCTTCTTCCCAGTCCTCTGTCCCTaGGATTCTGGTCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: FRNTRSMEKYLTGVKGFFPVLCP*DSGPGT
Trigger: TGTCCCAGGACCAGAATCCCAGGGACAGAGGACTGG...GAAGAAGCCCTTCACTCCGGTCAAGTACTTCTCCATCGACCGCGTATTCCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CCA 90 bp ACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTCCCTGGCTCCATCAATaGCGTCTGGTTGACCAGAGG +
Preference number: 4 (lower is better)
Translates to: TLLDNRWPTGLLRAHPHSPWLHQ*RLVDQR
Trigger: CCTCTGGTCAACCAGACGCCATTGATGGAGCCAGGG...ACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588025.5
3UTR CAA 72 bp CACAGGGGACTGTCATACACCATCTGCAGGTTCACCTaGTGGCCCACCAGCTCCCGGATATTGTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: HRGLSYTICRFT*WPTSSRILLMP
Trigger: TGGCATCAACAATATCCGGGAGCTGGTGGGCCACAAGGTGAACCTGCAGATGGTGTATGACAGTCCCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR TCA 90 bp ATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAAGAAGGAGCTCTCAATaGAGTTATCAGTCGGCATCT +
Preference number: 4 (lower is better)
Translates to: IQGHWPGMQRSAAAGTRGRRSSQ*SYQSAS
Trigger: AGATGCCGACTGATAACTTCATTGAGAGCTCCTTCT...TCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp ACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCGCAGTAAGCTCCCAGTaGTTGGTGGACCGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: TGQQKEPATQSSVPGILVAVSSQ*LVDRSS
Trigger: TGAACTTCGGTCCACCAAGCACTGGGAGCTTACTGC...GACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp CTGCTGGGGCTGGAAGAGGGCGTCAAAGTTCCAGAAGGAGCTCTCAATGAAGTTGGCTTGAAGCGGAGTTaGGTGATACCCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLGLEEGVKVPEGALNEVGLKRS*VIPSLV
Trigger: CACCAAGCTGGGTATCACGCAACTCCGCTTCAAGCC...AACTTCATTGAGAGCTCCTTCTGGAACTTTGACGCCCTCTTCCAGCCCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR GCA 90 bp AGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCGGCTTGAAGCGGAGTTaGGTGATACCCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SRHTTQDNRRNLLPSPLSGLKRS*VIPSLV
Trigger: CACCAAGCTGGGTATCACGCAACTCCGCTTCAAGCC...GGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp AGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCCTGTCATACACCATCTaGAGGTTCACCTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RGLINTRSLARDAKERSSLSYTI*RFTLWP
Trigger: GGGCCACAAGGTGAACCTGCAGATGGTGTATGACAG...GCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp AACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACACTGGAGATCATCTCTaGGCTCAGCTCTGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: NRRNLLPSPLSLGFWSWDTGDHL*AQLCLL
Trigger: CAAGAGACAGAGCTGAGCCCAGAGATGATCTCCAGT...GTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp ACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAAGATCTGTCGGAACTaGGAGCGGACCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLLDNRWPTGLLRAHPHSKICRN*ERTLSS
Trigger: GCTGCTCAAGGTCCGCTCCCAGTTCCGACAGATCTT...ACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CCA 90 bp GCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCCTGGCTGATGTGGTGTaGGTTCGCAGTAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: AHPHSRHTTQDNRRNLLPLADVV*VRSRFF
Trigger: GAAAAACCTACTGCGAACCCACACCACATCAGCCAG...GGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CCA 90 bp GTAGGCTGGCTTGAAGCGGAGTTGCGTGATACCCAGCTTGGTGAAGAACTCCCGCTGGCTGATGTGGTGTaGGTTCGCAGTAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: VGWLEAELRDTQLGEELPLADVV*VRSRFF
Trigger: GAAAAACCTACTGCGAACCCACACCACATCAGCCAG...CGGGAGTTCTTCACCAAGCTGGGTATCACGCAACTCCGCTTCAAGCCAGCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CAA 72 bp AGGTTCACCTTGTGGCCCACCAGCTCCCGGATATTGTaGATGCCATATTTGATCATCGTTGGGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RFTLWPTSSRIL*MPYLIIVGRSR
Trigger: CCTGGAGCGCCCAACGATGATCAAATATGGCATCAACAATATCCGGGAGCTGGTGGGCCACAAGGTGAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
3UTR CAA 72 bp TGCAGGTTCACCTTGTGGCCCACCAGCTCCCGGATATaGTTGATGCCATATTTGATCATCGTTGGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: CRFTLWPTSSRI*LMPYLIIVGRS
Trigger: GGAGCGCCCAACGATGATCAAATATGGCATCAACAATATCCGGGAGCTGGTGGGCCACAAGGTGAACCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR GCA 90 bp ACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTGCACCTCATCCTCCATaGTGTCCACCACTCGGAACA +
Preference number: 4 (lower is better)
Translates to: TVDTPHRTTEGTCYPVLCAPHPP*CPPLGT
Trigger: TGTTCCGAGTGGTGGACAGCATGGAGGATGAGGTGC...ACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR GCA 90 bp AATACGCGGTCGATGGAGAAGTACTTGACCGGAGTGAAGGGCTTCTTCTGGGCACTGTCATACACCATCTaGAGGTTCACCTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: NTRSMEKYLTGVKGFFWALSYTI*RFTLWP
Trigger: GGGCCACAAGGTGAACCTGCAGATGGTGTATGACAG...TGCCCAGAAGAAGCCCTTCACTCCGGTCAAGTACTTCTCCATCGACCGCGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR TCA 90 bp TCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCAGAAGGAGCTCTCAATaGAGTTATCAGTCGGCATCT +
Preference number: 4 (lower is better)
Translates to: SGPTLTVDTPHRTTEGTCRRSSQ*SYQSAS
Trigger: AGATGCCGACTGATAACTTCATTGAGAGCTCCTTCT...GCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR TCA 90 bp CAGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGAGCACCGCCCTGTTTTaGGTTTTATCTAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: QRPHKYKVTGQGCKGAQQSTALF*VLSSLT
Trigger: AGTGAGGCTAGATAAAACTCAAAACAGGGCGGTGCT...CTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS-3UTR CCA 90 bp AGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCTCCATCAATGGCGTCTaGTTGACCAGAGGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: RGLINTRSLARDAKERSSSINGV*LTRGVK
Trigger: TTTTACCCCTCTGGTCAACCAGACGCCATTGATGGA...GCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS-3UTR TCA 90 bp ACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCAGAAGGAGCTCTCAATaGAGTTATCAGTCGGCATCT +
Preference number: 4 (lower is better)
Translates to: TGQQKEPATQSSVPGILVRRSSQ*SYQSAS
Trigger: AGATGCCGACTGATAACTTCATTGAGAGCTCCTTCT...GACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp CTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACAGAAGGAGCTCTCAATaGAGTTATCAGTCGGCATCT +
Preference number: 4 (lower is better)
Translates to: LINTRSLARDAKERSSRDRRSSQ*SYQSAS
Trigger: AGATGCCGACTGATAACTTCATTGAGAGCTCCTTCT...GTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR TCA 90 bp CTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTGTGTACCGCCATCTTaGATGTGTCTAACTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LINTRSLARDAKERSSRDCVPPS*MCLTVE
Trigger: TTCTACAGTTAGACACATTCAAGATGGCGGTACACA...GTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS GCA 90 bp CTGCCCTCCCGGGCAATCTCCTCGCCCTCCGCAGTAAGCTCCCAGTaGTTGGTGGACCGAAGTTCAGCCTCGATGACCTCGCCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: LPSRAISSPSAVSSQ*LVDRSSASMTSPSA
Trigger: GGCGCTGGGCGAGGTCATCGAGGCTGAACTTCGGTCCACCAAGCACTGGGAGCTTACTGCGGAGGGCGAGGAGATTGCCCGGGAGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000586280.1
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS TCA 90 bp GGCCGCTGTCGGGGAGGACACCGTGGGCCAAGAAGTTGTAGGGCTTaGAGGGCCGGTCCCGCCAAGAGCCACTGGAGATCATCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: GRCRGGHRGPRSCRA*RAGPAKSHWRSSLG
Trigger: GCCCAGAGATGATCTCCAGTGGCTCTTGGCGGGACCGGCCCTTCAAGCCCTACAACTTCTTGGCCCACGGTGTCCTCCCCGACAGCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314606.9
ENST00000586146.5
ENST00000586280.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
ENST00000593021.1
CDS TCA 90 bp CTCACCCCATCTCCAGGAAGATCTGTCGGAACTGGGAGCGGACCTTaGGCAGCGGGTGAAGGTGGCCGCTGTCGGGGAGGACACCGTGGG +
Preference number: 5 (lower is better)
Translates to: LTPSPGRSVGTGSGP*AAGEGGRCRGGHRG
Trigger: CCCACGGTGTCCTCCCCGACAGCGGCCACCTTCACCCGCTGCTCAAGGTCCGCTCCCAGTTCCGACAGATCTTCCTGGAGATGGGGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592662.5
CDS GCA 90 bp CCTGCCTGTACCCAGCAGAAGCACCAGGCACCGCCCCCAGCCCTGTaGTCACCCCATCTCCAGGAAGATCTGTCGGAACTGGGAGCGGAC +
Preference number: 5 (lower is better)
Translates to: PACTQQKHQAPPPAL*SPHLQEDLSELGAD
Trigger: GTCCGCTCCCAGTTCCGACAGATCTTCCTGGAGATGGGGTGAGCACAGGGCTGGGGGCGGTGCCTGGTGCTTCTGCTGGGTACAGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592662.5
CDS CCA 90 bp TCACCCCGCAGCTCCTACCATAAGCTCGCTCTGGGCCAGGCCCTCTaGGGGAATGCTTCGAAACACACGGGCCTCATGGCTGCCCTCCCG +
Preference number: 5 (lower is better)
Translates to: SPRSSYHKLALGQAL*GNASKHTGLMAALP
Trigger: CGGGAGGGCAGCCATGAGGCCCGTGTGTTTCGAAGCATTCCCCCAGAGGGCCTGGCCCAGAGCGAGCTTATGGTAGGAGCTGCGGGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586280.1
CDS CCA 90 bp GGGCCAACCGCACCTTCTGGGCAAGGCGGTAGAGCGCACGGGCGCTaGCTGATGTGGTGTGGGTTCGCAGTAGGTTTTTCCGGGCCTCGT +
Preference number: 5 (lower is better)
Translates to: GPTAPSGQGGRAHGR*LMWCGFAVGFSGPR
Trigger: ACGAGGCCCGGAAAAACCTACTGCGAACCCACACCACATCAGCCAGCGCCCGTGCGCTCTACCGCCTTGCCCAGAAGGTGCGGTTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588965.5
CDS TCA 90 bp GGCCGCTGTCGGGGAGGACACCGTGGGCCAAGAAGTTGTAGGGCTTaGAGGGCCGGTCCCGCCAAGAGCCAACTTCAGCCAACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GRCRGGHRGPRSCRA*RAGPAKSQLQPTAS
Trigger: GGAAGCTGTTGGCTGAAGTTGGCTCTTGGCGGGACCGGCCCTTCAAGCCCTACAACTTCTTGGCCCACGGTGTCCTCCCCGACAGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423140.6
CDS CCA 90 bp TTTGCCACTGGGCAGTCGCATAAGCTCGCTCTGGGCCAGGCCCTCTaGGGGAATGCTTCGAAACACACGGGCCTCATGGCTGCCCTCCCG +
Preference number: 5 (lower is better)
Translates to: FATGQSHKLALGQAL*GNASKHTGLMAALP
Trigger: CGGGAGGGCAGCCATGAGGCCCGTGTGTTTCGAAGCATTCCCCCAGAGGGCCTGGCCCAGAGCGAGCTTATGCGACTGCCCAGTGGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS CCA 90 bp GCACCTTCTGGGCAAGGCGGTAGAGCGCACGGGCGCTGGCTGATGTaGTGTGGGTTCGCAGTAGGTTTTTCCGGGCCTCGTCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: APSGQGGRAHGRWLM*CGFAVGFSGPRPAS
Trigger: GGAAGCTGGACGAGGCCCGGAAAAACCTACTGCGAACCCACACCACATCAGCCAGCGCCCGTGCGCTCTACCGCCTTGCCCAGAAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588965.5
CDS TCA 90 bp TCCAGGAAGATCTGTCGGAACTGGGAGCGGACCTTGAGCAGCGGGTaGAGGTGGCCGCTGTCGGGGAGGACACCGTGGGCCAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SRKICRNWERTLSSG*RWPLSGRTPWAKKL
Trigger: CAACTTCTTGGCCCACGGTGTCCTCCCCGACAGCGGCCACCTTCACCCGCTGCTCAAGGTCCGCTCCCAGTTCCGACAGATCTTCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586280.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
ENST00000593021.1
CDS-3UTR CAA 90 bp GTGGAACTCAGCCAGGTGCGTGGCGTCCAGGGTCTCATTCCGGAATACGCGGTCGCTGGACATAGTCCATaGGGAGCTGCAGGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: VELSQVRGVQGLIPEYAVAGHSP*GAAGPP
Trigger: CGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAGC...GACCGCGTATTCCGGAATGAGACCCTGGACGCCACGCACCTGGCTGAGTTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CAA 90 bp CCTCGGCTCGGCATCCAGGCGGCACAGGGGACTGTCATACACCATCTGCAGGTTATCTGCAGGTTCACCTaGTGGCCCACCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PRLGIQAAQGTVIHHLQVICRFT*WPTSSR
Trigger: CCGGGAGCTGGTGGGCCACAAGGTGAACCTGCAGAT...AACCTGCAGATGGTGTATGACAGTCCCCTGTGCCGCCTGGATGCCGAGCCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS TCA 90 bp AAGTTATCAGTCGGCATCTCGGTGAACCTGGTGGGAGACACAGCCTaGCTGCCCTGCCTGTACCCAGCAGAAGCACCAGGCACCGCCCCC +
Preference number: 5 (lower is better)
Translates to: KLSVGISVNLVGDTA*LPCLYPAEAPGTAP
Trigger: GGGGGCGGTGCCTGGTGCTTCTGCTGGGTACAGGCAGGGCAGTCAGGCTGTGTCTCCCACCAGGTTCACCGAGATGCCGACTGATAACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592662.5
CDS-3UTR CAA 90 bp GACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCGCTGGACATAGTCCATaGGGAGCTGCAGGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: DNRWPTGLLRAHPHSRHTAGHSP*GAAGPP
Trigger: CGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAGC...GGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CAA 90 bp GACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCCCGTCAGCCGCACTCTaGTCCACCCGAATCCACTTG +
Preference number: 5 (lower is better)
Translates to: DNRWPTGLLRAHPHSRHTPSAAL*STRIHL
Trigger: CAAGTGGATTCGGGTGGACAAGAGTGCGGCTGACGG...GGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CAA 90 bp ACCATGATCCGCCACCACGCCCTCGATCTGGTGGAACTCAGCCAGGTGCGTGGCTGCGTGATACCCAGCTaGGTGAAGAACTCCCGCAGA +
Preference number: 5 (lower is better)
Translates to: TMIRHHALDLVELSQVRGCVIPS*VKNSRR
Trigger: TCTGCGGGAGTTCTTCACCAAGCTGGGTATCACGCA...GCCACGCACCTGGCTGAGTTCCACCAGATCGAGGGCGTGGTGGCGGATCATGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CAA 90 bp GCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACCTGTCCTCCACTTCTTCAGGCCTaGGTGGTAGCTGAACACCTC +
Preference number: 5 (lower is better)
Translates to: ARDAKERSSRDSGRMTCPPLLQA*VVAEHL
Trigger: GAGGTGTTCAGCTACCACCAAGGCCTGAAGAAGTGG...AGGACAGGTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCGCGGGCTGTGTGACCTaGGACTTCCCCGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRAAGCVT*DFPVSG
Trigger: CCCAGAGACGGGGAAGTCCAAGGTCACACAGCCCGC...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS GCA 90 bp GCTGAAGCCCACTTTGCCACTGGGCAGTCGCTGGAAAAGAGAGGCTaGAGTGAGTGGGGCACGAGGGCCACCTTCATCCCATCACTCACT +
Preference number: 5 (lower is better)
Translates to: AEAHFATGQSLEKRG*SEWGTRATFIPSLT
Trigger: AGTGAGTGATGGGATGAAGGTGGCCCTCGTGCCCCACTCACTGCAGCCTCTCTTTTCCAGCGACTGCCCAGTGGCAAAGTGGGCTTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586280.1
CDS CCA 90 bp TTGGACATGGCCTTGCTGAAGCCCACTTTGCCACTGGGCAGTCGCTaGAAAAGAGAGGCTGCAGTGAGTGGGGCACGAGGGCCACCTTCA +
Preference number: 5 (lower is better)
Translates to: LDMALLKPTLPLGSR*KREAAVSGARGPPS
Trigger: TGAAGGTGGCCCTCGTGCCCCACTCACTGCAGCCTCTCTTTTCCAGCGACTGCCCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586280.1
CDS-3UTR CAA 90 bp CAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATTGTTGGACATGGCCTaGCTGAAGCCCACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: QGHWPGMQRSAAAGTRGGLLDMA*LKPTLP
Trigger: TGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAA...TCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp GTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACTTGTTGGACATGGCCTaGCTGAAGCCCACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: VTGQGCKGAQQQGLGEDDLLDMA*LKPTLP
Trigger: TGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAA...GTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CTTGACCCGCTGGACATAGTCCATTGGGAGCTGCAGGGCCTCCGCTGGATCTCGTCCACCCGAATCCACTaGTTGGACATGGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LDPLDIVHWELQGLRWISSTRIH*LDMALL
Trigger: CAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGA...CGAGATCCAGCGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAGCGGGTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CAA 90 bp GGACATAGTCCATTGGGAGCTGCAGGGCCTCCGCTGGATCTCGAAGGAAGAAGGCCGTCAGCCGCACTCTaGTCCACCCGAATCCACTTG +
Preference number: 5 (lower is better)
Translates to: GHSPLGAAGPPLDLEGRRPSAAL*STRIHL
Trigger: CAAGTGGATTCGGGTGGACAAGAGTGCGGCTGACGG...CCTTCTTCCTTCGAGATCCAGCGGAGGCCCTGCAGCTCCCAATGGACTATGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CAA 90 bp GTGGAACTCAGCCAGGTGCGTGGCGTCCAGGGTCTCATTCCGGAATACGCGGTCTGGCTTGAAGCGGAGTaGCGTGATACCCAGCTTGGT +
Preference number: 5 (lower is better)
Translates to: VELSQVRGVQGLIPEYAVWLEAE*RDTQLG
Trigger: ACCAAGCTGGGTATCACGCAACTCCGCTTCAAGCCA...GACCGCGTATTCCGGAATGAGACCCTGGACGCCACGCACCTGGCTGAGTTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CAA 90 bp AACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACATCTGCAGGTTCACCTaGTGGCCCACCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: NRRNLLPSPLSLGFWSWDICRFT*WPTSSR
Trigger: CCGGGAGCTGGTGGGCCACAAGGTGAACCTGCAGAT...GTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAGTAAGCTCCCAGTGCTaGGTGGACCGAAGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: PQVSSGPTLTVDTPHRTTVSSQC*VDRSSA
Trigger: GGCTGAACTTCGGTCCACCAAGCACTGGGAGCTTAC...TGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CAA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCCGTCAGCCGCACTCTaGTCCACCCGAATCCACTTG +
Preference number: 5 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRAPSAAL*STRIHL
Trigger: CAAGTGGATTCGGGTGGACAAGAGTGCGGCTGACGG...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CAA 90 bp CTGAGAGTGGGTCCGCTTGACCCGCTGGACATAGTCCATTGGGAGCTGCAGGGCTCGATGGAGAAGTACTaGACCGGAGTGAAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: LRVGPLDPLDIVHWELQGSMEKY*TGVKGF
Trigger: GAAGCCCTTCACTCCGGTCAAGTACTTCTCCATCGA...GCCCTGCAGCTCCCAATGGACTATGTCCAGCGGGTCAAGCGGACCCACTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CAA 90 bp GACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCTGCGTGATACCCAGCTaGGTGAAGAACTCCCGCAGA +
Preference number: 5 (lower is better)
Translates to: DNRWPTGLLRAHPHSRHTCVIPS*VKNSRR
Trigger: TCTGCGGGAGTTCTTCACCAAGCTGGGTATCACGCA...GGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CAA 90 bp ATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGACCACTTCTTCAGGCCTaGGTGGTAGCTGAACACCTC +
Preference number: 5 (lower is better)
Translates to: IQGHWPGMQRSAAAGTRGPLLQA*VVAEHL
Trigger: GAGGTGTTCAGCTACCACCAAGGCCTGAAGAAGTGG...TCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCATCTGCAGGTTCACCTaGTGGCCCACCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: HKYKVTGQGCKGAQQQGLICRFT*WPTSSR
Trigger: CCGGGAGCTGGTGGGCCACAAGGTGAACCTGCAGAT...GAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp ACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACAATGTGTCGTCATCTaGAGTGTGGCGACGGAGCCG +
Preference number: 5 (lower is better)
Translates to: TIGGPQVSSGPTLTVDTPQCVVI*SVATEP
Trigger: CGGCTCCGTCGCCACACTCAAGATGACGACACATTG...TGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS TCA 90 bp CCGCACTCTTGTCCACCCGAATCCACTTGTTGGACATGGCCTTGCTaGAGCCCACTTTGCCACTGGGCAGTCGCTGGAAAAGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PHSCPPESTCWTWPC*SPLCHWAVAGKERL
Trigger: CAGCCTCTCTTTTCCAGCGACTGCCCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGACAAGAGTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586280.1
CDS-3UTR CAA 90 bp CACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGCCGTCAGCCGCACTCTaGTCCACCCGAATCCACTTG +
Preference number: 5 (lower is better)
Translates to: HTGQQKEPATQSSVPGILPSAAL*STRIHL
Trigger: CAAGTGGATTCGGGTGGACAAGAGTGCGGCTGACGG...CAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGAAGCTCTGTCTCTTGCTaGGAGATGCTGGTACTAAAG +
Preference number: 5 (lower is better)
Translates to: QGHWPGMQRSAAAGTRGGSSVSC*EMLVLK
Trigger: CTTTAGTACCAGCATCTCCAAGCAAGAGACAGAGCT...TCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp ATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGATCGATGGAGAAGTACTaGACCGGAGTGAAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: IQGHWPGMQRSAAAGTRGSMEKY*TGVKGF
Trigger: GAAGCCCTTCACTCCGGTCAAGTACTTCTCCATCGA...TCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp AGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCATCTGCAGGTTCACCTaGTGGCCCACCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SRHTTQDNRRNLLPSPLSICRFT*WPTSSR
Trigger: CCGGGAGCTGGTGGGCCACAAGGTGAACCTGCAGAT...GGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp ACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCGTAAGCTCCCAGTGCTaGGTGGACCGAAGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: TGQQKEPATQSSVPGILVVSSQC*VDRSSA
Trigger: GGCTGAACTTCGGTCCACCAAGCACTGGGAGCTTAC...GACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CAGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGGTAAGCTCCCAGTGCTaGGTGGACCGAAGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: QRPHKYKVTGQGCKGAQQVSSQC*VDRSSA
Trigger: GGCTGAACTTCGGTCCACCAAGCACTGGGAGCTTAC...CTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTTTGCTGAAGCCCACTTaGCCACTGGGCAGTCGCATA +
Preference number: 5 (lower is better)
Translates to: LPTLLDNRWPTGLLRAHPLLKPT*PLGSRI
Trigger: TATGCGACTGCCCAGTGGCAAAGTGGGCTTCAGCAA...AGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CAA 90 bp ACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTGCTGGACATAGTCCATaGGGAGCTGCAGGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: TVDTPHRTTEGTCYPVLCAGHSP*GAAGPP
Trigger: CGGAGGCCCTGCAGCTCCCAATGGACTATGTCCAGC...ACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp ACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGTGCGTGATACCCAGCTaGGTGAAGAACTCCCGCAGA +
Preference number: 5 (lower is better)
Translates to: TTEGTCYPVLCPWDSGPGCVIPS*VKNSRR
Trigger: TCTGCGGGAGTTCTTCACCAAGCTGGGTATCACGCA...CCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCTGGCTTGAAGCGGAGTaGCGTGATACCCAGCTTGGT +
Preference number: 5 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRAWLEAE*RDTQLG
Trigger: ACCAAGCTGGGTATCACGCAACTCCGCTTCAAGCCA...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CAA 90 bp GGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGCCACTTCTTCAGGCCTaGGTGGTAGCTGAACACCTC +
Preference number: 5 (lower is better)
Translates to: GLINTRSLARDAKERSSRPLLQA*VVAEHL
Trigger: GAGGTGTTCAGCTACCACCAAGGCCTGAAGAAGTGG...CCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS GCA 90 bp CGCCAAGAGCCACTGGAGATCATCTCTGGGCTCAGCTCTGTCTCTTaGTTGGAGATGCTGGTACTAAAGGCACTGCCTTTGCTCACCCAG +
Preference number: 5 (lower is better)
Translates to: RQEPLEIISGLSSVS*LEMLVLKALPLLTQ
Trigger: CTGGGTGAGCAAAGGCAGTGCCTTTAGTACCAGCATCTCCAAGCAAGAGACAGAGCTGAGCCCAGAGATGATCTCCAGTGGCTCTTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314606.9
ENST00000586146.5
ENST00000586280.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
ENST00000593021.1
CDS-3UTR CAA 90 bp AGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCGTAAGCTCCCAGTGCTaGGTGGACCGAAGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: SRHTTQDNRRNLLPSPLSVSSQC*VDRSSA
Trigger: GGCTGAACTTCGGTCCACCAAGCACTGGGAGCTTAC...GGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp ACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGTTGTTGGACATGGCCTaGCTGAAGCCCACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: TTEGTCYPVLCPWDSGPGLLDMA*LKPTLP
Trigger: TGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAA...CCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp GGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGACCCGAATCCACTTGTaGGACATGGCCTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GLINTRSLARDAKERSSRTRIHL*DMALLK
Trigger: CTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGT...CCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCCACCCGAATCCACTaGTTGGACATGGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LINTRSLARDAKERSSRDSTRIH*LDMALL
Trigger: CAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGA...GTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp AACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACTCGATGGAGAAGTACTaGACCGGAGTGAAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: NRRNLLPSPLSLGFWSWDSMEKY*TGVKGF
Trigger: GAAGCCCTTCACTCCGGTCAAGTACTTCTCCATCGA...GTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTCGATGGAGAAGTACTaGACCGGAGTGAAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: QDNRRNLLPSPLSLGFWSSMEKY*TGVKGF
Trigger: GAAGCCCTTCACTCCGGTCAAGTACTTCTCCATCGA...GGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CCCACCCTCACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCATGCGTGATACCCAGCTaGGTGAAGAACTCCCGCAGA +
Preference number: 5 (lower is better)
Translates to: PTLTVDTPHRTTEGTCYPCVIPS*VKNSRR
Trigger: TCTGCGGGAGTTCTTCACCAAGCTGGGTATCACGCA...TGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGTGGCTTGAAGCGGAGTaGCGTGATACCCAGCTTGGT +
Preference number: 5 (lower is better)
Translates to: HTGQQKEPATQSSVPGILWLEAE*RDTQLG
Trigger: ACCAAGCTGGGTATCACGCAACTCCGCTTCAAGCCA...CAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp ACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCTGGCTTGAAGCGGAGTaGCGTGATACCCAGCTTGGT +
Preference number: 5 (lower is better)
Translates to: TGQQKEPATQSSVPGILVWLEAE*RDTQLG
Trigger: ACCAAGCTGGGTATCACGCAACTCCGCTTCAAGCCA...GACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp ACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCCACTTCTTCAGGCCTaGGTGGTAGCTGAACACCTC +
Preference number: 5 (lower is better)
Translates to: TGQQKEPATQSSVPGILVPLLQA*VVAEHL
Trigger: GAGGTGTTCAGCTACCACCAAGGCCTGAAGAAGTGG...GACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp GTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCGGGGAGGATGACAGCTCCCGGATATTGTaGATGCCATATTTGATCATC +
Preference number: 5 (lower is better)
Translates to: VTGQGCKGAQQQGLGEDDSSRIL*MPYLII
Trigger: GATGATCAAATATGGCATCAACAATATCCGGGAGCT...GTCATCCTCCCCGAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CAGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGACCCGAATCCACTTGTaGGACATGGCCTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: QRPHKYKVTGQGCKGAQQTRIHL*DMALLK
Trigger: CTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGT...CTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACACCCGAATCCACTTGTaGGACATGGCCTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LINTRSLARDAKERSSRDTRIHL*DMALLK
Trigger: CTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGT...GTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp ACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTTCCACCCGAATCCACTaGTTGGACATGGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TLLDNRWPTGLLRAHPHSSTRIH*LDMALL
Trigger: CAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGA...ACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CAA 90 bp ACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCATTGTTGATGCCATATTaGATCATCGTTGGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: TIGGPQVSSGPTLTVDTPLLMPY*IIVGRS
Trigger: GGAGCGCCCAACGATGATCAAATATGGCATCAACAA...TGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CAA 90 bp ATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACACCAGCTCCCGGATATaGTTGATGCCATATTTGATC +
Preference number: 5 (lower is better)
Translates to: IGGPQVSSGPTLTVDTPHTSSRI*LMPYLI
Trigger: GATCAAATATGGCATCAACAATATCCGGGAGCTGGT...GTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS TCA 90 bp GGAGCAGCAGTTCCGCCACCGGAACCGGAGTGTGTACCGCCATCTTaGATGTGTCTAACTGTAGAACAGGGCTCAATGTGTCGTCATCTT +
Preference number: 5 (lower is better)
Translates to: GAAVPPPEPECVPPS*MCLTVEQGSMCRHL
Trigger: AAGATGACGACACATTGAGCCCTGTTCTACAGTTAGACACATTCAAGATGGCGGTACACACTCCGGTTCCGGTGGCGGAACTGCTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS-3UTR CAA 90 bp TTCCGGAATACGCGGTCGATGGAGAAGTACTTGACCGGAGTGAAGGGCTTCTTCACCCGAATCCACTTGTaGGACATGGCCTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: FRNTRSMEKYLTGVKGFFTRIHL*DMALLK
Trigger: CTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGT...GAAGAAGCCCTTCACTCCGGTCAAGTACTTCTCCATCGACCGCGTATTCCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CAA 90 bp ACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTTCCACCCGAATCCACTaGTTGGACATGGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TVDTPHRTTEGTCYPVLCSTRIH*LDMALL
Trigger: CAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGA...ACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp GGGCAACTGCCCACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCAGCTCTGTCTCTTGCTaGGAGATGCTGGTACTAAAG +
Preference number: 5 (lower is better)
Translates to: GQLPTLLDNRWPTGLLRASSVSC*EMLVLK
Trigger: CTTTAGTACCAGCATCTCCAAGCAAGAGACAGAGCT...GGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGTGGGCAGTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314606.9
ENST00000588025.5
CDS-3UTR CAA 90 bp GGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGTTGTTGATGCCATATTaGATCATCGTTGGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: GLINTRSLARDAKERSSRLLMPY*IIVGRS
Trigger: GGAGCGCCCAACGATGATCAAATATGGCATCAACAA...CCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp ACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCAACCAGCTCCCGGATATaGTTGATGCCATATTTGATC +
Preference number: 5 (lower is better)
Translates to: TIGGPQVSSGPTLTVDTPTSSRI*LMPYLI
Trigger: GATCAAATATGGCATCAACAATATCCGGGAGCTGGT...TGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CAA 90 bp CAGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGTTGTTGATGCCATATTaGATCATCGTTGGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: QRPHKYKVTGQGCKGAQQLLMPY*IIVGRS
Trigger: GGAGCGCCCAACGATGATCAAATATGGCATCAACAA...CTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCACACAGGACAACAAGCTCCCGGATATTGTaGATGCCATATTTGATCATC +
Preference number: 5 (lower is better)
Translates to: PQVSSGPTLTVDTPHRTTSSRIL*MPYLII
Trigger: GATGATCAAATATGGCATCAACAATATCCGGGAGCT...TGTTGTCCTGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CAA 90 bp ACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTAGACACACCAAGCTCCCGGATATTGTaGATGCCATATTTGATCATC +
Preference number: 5 (lower is better)
Translates to: TIGGPQVSSGPTLTVDTPSSRIL*MPYLII
Trigger: GATGATCAAATATGGCATCAACAATATCCGGGAGCT...TGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS TCA 90 bp TTGAATGTGTCTAACTGTAGAACAGGGCTCAATGTGTCGTCATCTTaGGTGTGGCGACGGAGCCGCAAAAGGTGCATGGGACTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: LNVSNCRTGLNVSSS*VWRRSRKRCMGLSS
Trigger: GGAACTGAGTCCCATGCACCTTTTGCGGCTCCGTCGCCACACTCAAGATGACGACACATTGAGCCCTGTTCTACAGTTAGACACATTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS-3UTR CAA 90 bp AATACGCGGTCGATGGAGAAGTACTTGACCGGAGTGAAGGGCTTCTTCTGGGCATTGTTGATGCCATATTaGATCATCGTTGGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: NTRSMEKYLTGVKGFFWALLMPY*IIVGRS
Trigger: GGAGCGCCCAACGATGATCAAATATGGCATCAACAA...TGCCCAGAAGAAGCCCTTCACTCCGGTCAAGTACTTCTCCATCGACCGCGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CAA 90 bp AGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTCCATCAATGGCGTCTGGTaGACCAGAGGGGTAAAATTG +
Preference number: 5 (lower is better)
Translates to: SRHTTQDNRRNLLPSPLSINGVW*TRGVKL
Trigger: CAATTTTACCCCTCTGGTCAACCAGACGCCATTGAT...GGACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS-3UTR CAA 90 bp AGAGGCCTCATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCGTGTGTACCGCCATCTaGAATGTGTCTAACTGTAGA +
Preference number: 5 (lower is better)
Translates to: RGLINTRSLARDAKERSSVCTAI*NVSNCR
Trigger: TCTACAGTTAGACACATTCAAGATGGCGGTACACAC...GCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATGAGGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS-3UTR CAA 90 bp ACAGTAGACACACCACACAGGACAACAGAAGGAACCTGCTACCCAGTCCTCTGTAGCTCTGTCTCTTGCTaGGAGATGCTGGTACTAAAG +
Preference number: 5 (lower is better)
Translates to: TVDTPHRTTEGTCYPVLCSSVSC*EMLVLK
Trigger: CTTTAGTACCAGCATCTCCAAGCAAGAGACAGAGCT...ACAGAGGACTGGGTAGCAGGTTCCTTCTGTTGTCCTGTGTGGTGTGTCTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp CATAAATACAAGGTCACTGGCCAGGGATGCAAAGGAGCGCAGCAGCAGGGACTCAGCTCCCGGATATTGTaGATGCCATATTTGATCATC +
Preference number: 5 (lower is better)
Translates to: HKYKVTGQGCKGAQQQGLSSRIL*MPYLII
Trigger: GATGATCAAATATGGCATCAACAATATCCGGGAGCT...GAGTCCCTGCTGCTGCGCTCCTTTGCATCCCTGGCCAGTGACCTTGTATTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000588025.5
CDS-3UTR CAA 90 bp ACTTTATTAGACAATAGGTGGCCCACAGGTCTCCTCAGGGCCCACCCTCACAGTACCAGCTCCCGGATATaGTTGATGCCATATTTGATC +
Preference number: 5 (lower is better)
Translates to: TLLDNRWPTGLLRAHPHSTSSRI*LMPYLI
Trigger: GATCAAATATGGCATCAACAATATCCGGGAGCTGGT...ACTGTGAGGGTGGGCCCTGAGGAGACCTGTGGGCCACCTATTGTCTAATAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000588025.5
CDS-3UTR CAA 90 bp CTGCTGGGGCTGGAAGAGGGCGTCAAAGTTCCAGAAGGAGCTCTCAATGAAGTTACCAGCTCCCGGATATaGTTGATGCCATATTTGATC +
Preference number: 5 (lower is better)
Translates to: LLGLEEGVKVPEGALNEVTSSRI*LMPYLI
Trigger: GATCAAATATGGCATCAACAATATCCGGGAGCTGGT...AACTTCATTGAGAGCTCCTTCTGGAACTTTGACGCCCTCTTCCAGCCCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586146.5
CDS-3UTR CAA 90 bp AACAGAAGGAACCTGCTACCCAGTCCTCTGTCCCTGGGATTCTGGTCCTGGGACACCAGAGGGGTAAAATaGATTATCTCAAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: NRRNLLPSPLSLGFWSWDTRGVK*IISRSE
Trigger: TTCTGACCTTGAGATAATCAATTTTACCCCTCTGGT...GTCCCAGGACCAGAATCCCAGGGACAGAGGACTGGGTAGCAGGTTCCTTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS GCA 72 bp GGCTCTTCACGGCGCCCACCACCGCCTGGTGCTCCATaGCCAGCTCAGCCGCCAACTCGGCGCTGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: GSSRRPPPPGAP*PAQPPTRRCPG
Trigger: GCCTGGACAGCGCCGAGTTGGCGGCTGAGCTGGGCATGGAGCACCAGGCGGTGGTGGGCGCCGTGAAGAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000586280.1
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
ENST00000593021.1
CDS TCA 72 bp GTCGGCATCTCGGTGAACCTGGTGGGAGACACAGCCTaGCTGCCCTGCCTGTACCCAGCAGAAGCACCAGGC +
Preference number: 6 (lower is better)
Translates to: VGISVNLVGDTA*LPCLYPAEAPG
Trigger: GCCTGGTGCTTCTGCTGGGTACAGGCAGGGCAGTCAGGCTGTGTCTCCCACCAGGTTCACCGAGATGCCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592662.5
CDS GCA 72 bp ACCCAGCAGAAGCACCAGGCACCGCCCCCAGCCCTGTaGTCACCCCATCTCCAGGAAGATCTGTCGGAACTG +
Preference number: 6 (lower is better)
Translates to: TQQKHQAPPPAL*SPHLQEDLSEL
Trigger: CAGTTCCGACAGATCTTCCTGGAGATGGGGTGAGCACAGGGCTGGGGGCGGTGCCTGGTGCTTCTGCTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592662.5
CDS CCA 72 bp GGGCAGTCGCATAAGCTCGCTCTGGGCCAGGCCCTCTaGGGGAATGCTTCGAAACACACGGGCCTCATGGCT +
Preference number: 6 (lower is better)
Translates to: GQSHKLALGQAL*GNASKHTGLMA
Trigger: AGCCATGAGGCCCGTGTGTTTCGAAGCATTCCCCCAGAGGGCCTGGCCCAGAGCGAGCTTATGCGACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS CAA 90 bp ACCCGGGGCCCGTCAGCCGCACTCTTGTCCACCCGAATCCACTTGTaGGACATGGCCTTGCTGAAGCCCACTTTGCCACTGGGCAGTCGC +
Preference number: 6 (lower is better)
Translates to: TRGPSAALLSTRIHL*DMALLKPTLPLGSR
Trigger: GCGACTGCCCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGACAAGAGTGCGGCTGACGGGCCCCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000586280.1
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS CAA 90 bp CAGGAACGCACCACTCGGAACACCCGGGGCCCGTCAGCCGCACTCTaGTCCACCCGAATCCACTTGTTGGACATGGCCTTGCTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: QERTTRNTRGPSAAL*STRIHLLDMALLKP
Trigger: GGGCTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGACAAGAGTGCGGCTGACGGGCCCCGGGTGTTCCGAGTGGTGCGTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587981.1
CDS CAA 90 bp ATGCTGTCCACCACTCGGAACACCCGGGGCCCGTCAGCCGCACTCTaGTCCACCCGAATCCACTTGTTGGACATGGCCTTGCTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: MLSTTRNTRGPSAAL*STRIHLLDMALLKP
Trigger: GGGCTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGACAAGAGTGCGGCTGACGGGCCCCGGGTGTTCCGAGTGGTGGACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000586280.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS GCA 72 bp CGGGCAATCTCCTCGCCCTCCGCAGTAAGCTCCCAGTaGTTGGTGGACCGAAGTTCAGCCTCGATGACCTCG +
Preference number: 6 (lower is better)
Translates to: RAISSPSAVSSQ*LVDRSSASMTS
Trigger: CGAGGTCATCGAGGCTGAACTTCGGTCCACCAAGCACTGGGAGCTTACTGCGGAGGGCGAGGAGATTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000586280.1
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS GCA 72 bp AGCCGCCGCTGCACCTCATCCTCCATGCTGTCCACCTaGCAGGATAAGGAGTGTGAGGGGTATGAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: SRRCTSSSMLST*QDKECEGYEGQ
Trigger: CTGGCCCTCATACCCCTCACACTCCTTATCCTGGCAGGTGGACAGCATGGAGGATGAGGTGCAGCGGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587981.1
CDS CCA 72 bp GCACCTTCTGGGCAAGGCGGTAGAGCGCACGGGCGCTaGCTGATGTGGTGTGGGTTCGCAGTAGGTTTTTCC +
Preference number: 6 (lower is better)
Translates to: APSGQGGRAHGR*LMWCGFAVGFS
Trigger: GGAAAAACCTACTGCGAACCCACACCACATCAGCCAGCGCCCGTGCGCTCTACCGCCTTGCCCAGAAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588965.5
CDS CAA 72 bp GCAATCTCCTCGCCCTCCGCAGTAAGCTCCCAGTGCTaGGTGGACCGAAGTTCAGCCTCGATGACCTCGCCC +
Preference number: 6 (lower is better)
Translates to: AISSPSAVSSQC*VDRSSASMTSP
Trigger: GGGCGAGGTCATCGAGGCTGAACTTCGGTCCACCAAGCACTGGGAGCTTACTGCGGAGGGCGAGGAGATTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000586280.1
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS CAA 72 bp ACCACTCGGAACACCCGGGGCCCGTCAGCCGCACTCTaGTCCACCCGAATCCACTTGTTGGACATGGCCTTG +
Preference number: 6 (lower is better)
Translates to: TTRNTRGPSAAL*STRIHLLDMAL
Trigger: CAAGGCCATGTCCAACAAGTGGATTCGGGTGGACAAGAGTGCGGCTGACGGGCCCCGGGTGTTCCGAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000586280.1
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS CAA 90 bp AACACCCGGGGCCCGTCAGCCGCACTCTTGTCCACCCGAATCCACTaGTTGGACATGGCCTTGCTGAAGCCCACTTTGCCACTGGGCAGT +
Preference number: 6 (lower is better)
Translates to: NTRGPSAALLSTRIH*LDMALLKPTLPLGS
Trigger: ACTGCCCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGACAAGAGTGCGGCTGACGGGCCCCGGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000586280.1
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS TCA 72 bp AAAGAGGAAGGTGGGGGCTGGCCCAAGGTGAGACCATaGTCCGCCACCACGCCCTCGATCTGGTGGAACTCA +
Preference number: 6 (lower is better)
Translates to: KEEGGGWPKVRP*SATTPSIWWNS
Trigger: TGAGTTCCACCAGATCGAGGGCGTGGTGGCGGATCATGGTCTCACCTTGGGCCAGCCCCCACCTTCCTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587488.5
CDS GCA 72 bp CACTTTGCCACTGGGCAGTCGCTGGAAAAGAGAGGCTaGAGTGAGTGGGGCACGAGGGCCACCTTCATCCCA +
Preference number: 6 (lower is better)
Translates to: HFATGQSLEKRG*SEWGTRATFIP
Trigger: TGGGATGAAGGTGGCCCTCGTGCCCCACTCACTGCAGCCTCTCTTTTCCAGCGACTGCCCAGTGGCAAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586280.1
CDS CCA 72 bp CCCACTTTGCCACTGGGCAGTCGCATAAGCTCGCTCTaGGCCAGGCCCTCTGGGGGAATGCTTCGAAACACA +
Preference number: 6 (lower is better)
Translates to: PTLPLGSRISSL*ARPSGGMLRNT
Trigger: TGTGTTTCGAAGCATTCCCCCAGAGGGCCTGGCCCAGAGCGAGCTTATGCGACTGCCCAGTGGCAAAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS CCA 72 bp AGCTCCTACCATAAGCTCGCTCTGGGCCAGGCCCTCTaGGGGAATGCTTCGAAACACACGGGCCTCATGGCT +
Preference number: 6 (lower is better)
Translates to: SSYHKLALGQAL*GNASKHTGLMA
Trigger: AGCCATGAGGCCCGTGTGTTTCGAAGCATTCCCCCAGAGGGCCTGGCCCAGAGCGAGCTTATGGTAGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586280.1
CDS CAA 72 bp GGCCCGTCAGCCGCACTCTTGTCCACCCGAATCCACTaGTTGGACATGGCCTTGCTGAAGCCCACTTTGCCA +
Preference number: 6 (lower is better)
Translates to: GPSAALLSTRIH*LDMALLKPTLP
Trigger: TGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGACAAGAGTGCGGCTGACGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000586280.1
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS CAA 90 bp TCAGCCGCACTCTTGTCCACCCGAATCCACTTGTTGGACATGGCCTaGCTGAAGCCCACTTTGCCACTGGGCAGTCGCATAAGCTCGCTC +
Preference number: 6 (lower is better)
Translates to: SAALLSTRIHLLDMA*LKPTLPLGSRISSL
Trigger: GAGCGAGCTTATGCGACTGCCCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGACAAGAGTGCGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS CAA 90 bp TCCACCCGAATCCACTTGTTGGACATGGCCTTGCTGAAGCCCACTTaGCCACTGGGCAGTCGCTGGAAAAGAGAGGCTGCAGTGAGTGGG +
Preference number: 6 (lower is better)
Translates to: STRIHLLDMALLKPT*PLGSRWKREAAVSG
Trigger: CCCACTCACTGCAGCCTCTCTTTTCCAGCGACTGCCCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586280.1
CDS CAA 72 bp CCGTCAGCCGCACTCTTGTCCACCCGAATCCACTTGTaGGACATGGCCTTGCTGAAGCCCACTTTGCCACTG +
Preference number: 6 (lower is better)
Translates to: PSAALLSTRIHL*DMALLKPTLPL
Trigger: CAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGACAAGAGTGCGGCTGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000586280.1
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS CAA 72 bp CTCTTGTCCACCCGAATCCACTTGTTGGACATGGCCTaGCTGAAGCCCACTTTGCCACTGGGCAGTCGCTGG +
Preference number: 6 (lower is better)
Translates to: LLSTRIHLLDMA*LKPTLPLGSRW
Trigger: CCAGCGACTGCCCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGACAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586280.1
CDS CAA 90 bp TCAGCCGCACTCTTGTCCACCCGAATCCACTTGTTGGACATGGCCTaGCTGAAGCCCACTTTGCCACTGGGCAGTCGCTGGAAAAGAGAG +
Preference number: 6 (lower is better)
Translates to: SAALLSTRIHLLDMA*LKPTLPLGSRWKRE
Trigger: CTCTCTTTTCCAGCGACTGCCCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGACAAGAGTGCGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586280.1
CDS TCA 72 bp TGTCCACCCGAATCCACTTGTTGGACATGGCCTTGCTaGAGCCCACTTTGCCACTGGGCAGTCGCTGGAAAA +
Preference number: 6 (lower is better)
Translates to: CPPESTCWTWPC*SPLCHWAVAGK
Trigger: TTTTCCAGCGACTGCCCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586280.1
CDS CAA 72 bp CTCTTGTCCACCCGAATCCACTTGTTGGACATGGCCTaGCTGAAGCCCACTTTGCCACTGGGCAGTCGCATA +
Preference number: 6 (lower is better)
Translates to: LLSTRIHLLDMA*LKPTLPLGSRI
Trigger: TATGCGACTGCCCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAAGTGGATTCGGGTGGACAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314606.9
ENST00000423140.6
ENST00000586146.5
ENST00000587981.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
CDS CAA 72 bp ATCCACTTGTTGGACATGGCCTTGCTGAAGCCCACTTaGCCACTGGGCAGTCGCTGGAAAAGAGAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: IHLLDMALLKPT*PLGSRWKREAA
Trigger: TGCAGCCTCTCTTTTCCAGCGACTGCCCAGTGGCAAAGTGGGCTTCAGCAAGGCCATGTCCAACAAGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586280.1
CDS CAA 90 bp CGGAGCAGCAGTTCCGCCACCGGAACCGGAGTGTGTACCGCCATCTaGAATGTGTCTAACTGTAGAACAGGGCTCAATGTGTCGTCATCT +
Preference number: 6 (lower is better)
Translates to: RSSSSATGTGVCTAI*NVSNCRTGLNVSSS
Trigger: AGATGACGACACATTGAGCCCTGTTCTACAGTTAGACACATTCAAGATGGCGGTACACACTCCGGTTCCGGTGGCGGAACTGCTGCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS TCA 72 bp TCTAACTGTAGAACAGGGCTCAATGTGTCGTCATCTTaGGTGTGGCGACGGAGCCGCAAAAGGTGCATGGGA +
Preference number: 6 (lower is better)
Translates to: SNCRTGLNVSSS*VWRRSRKRCMG
Trigger: TCCCATGCACCTTTTGCGGCTCCGTCGCCACACTCAAGATGACGACACATTGAGCCCTGTTCTACAGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS TCA 72 bp GTTCCGCCACCGGAACCGGAGTGTGTACCGCCATCTTaGATGTGTCTAACTGTAGAACAGGGCTCAATGTGT +
Preference number: 6 (lower is better)
Translates to: VPPPEPECVPPS*MCLTVEQGSMC
Trigger: ACACATTGAGCCCTGTTCTACAGTTAGACACATTCAAGATGGCGGTACACACTCCGGTTCCGGTGGCGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS GCA 72 bp CCACTGGAGATCATCTCTGGGCTCAGCTCTGTCTCTTaGTTGGAGATGCTGGTACTAAAGGCACTGCCTTTG +
Preference number: 6 (lower is better)
Translates to: PLEIISGLSSVS*LEMLVLKALPL
Trigger: CAAAGGCAGTGCCTTTAGTACCAGCATCTCCAAGCAAGAGACAGAGCTGAGCCCAGAGATGATCTCCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314606.9
ENST00000586146.5
ENST00000586280.1
ENST00000588025.5
ENST00000588965.5
ENST00000592662.5
ENST00000593021.1
CDS CAA 72 bp AGTTCCGCCACCGGAACCGGAGTGTGTACCGCCATCTaGAATGTGTCTAACTGTAGAACAGGGCTCAATGTG +
Preference number: 6 (lower is better)
Translates to: SSATGTGVCTAI*NVSNCRTGLNV
Trigger: CACATTGAGCCCTGTTCTACAGTTAGACACATTCAAGATGGCGGTACACACTCCGGTTCCGGTGGCGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588025.5
CDS TCA 72 bp ATTGATTATCTCAAGGTCAGAAGCACCGCCCTGTTTTaGGTTTTATCTAGCCTCACTTCGAGCGGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: IDYLKVRSTALF*VLSSLTSSGLC
Trigger: ACACAGCCCGCTCGAAGTGAGGCTAGATAAAACTCAAAACAGGGCGGTGCTTCTGACCTTGAGATAATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588025.5