RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FARS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000145982

Ensembl transcript IDs: ENST00000274680.9, ENST00000324331.10, ENST00000445533.1, ENST00000602691.1, ENST00000648580.1

Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGCGCGGTGCGTaGCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCT +
Preference number: 1 (lower is better)
Translates to: CRGDEMMSPKTQRGA*HGGSGVRSIVLNPP
Trigger: AGGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGCTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR GCA 90 bp GAGCCTCCGTTTCCTCATCACGAAGTGGGGGAGATAATCTTCCTGTaGAGAGGTGATGAGATGATGAGCCCAAAGACACAGCGCGGTGCG +
Preference number: 1 (lower is better)
Translates to: EPPFPHHEVGEIIFL*RGDEMMSPKTQRGA
Trigger: CGCACCGCGCTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCCCACTTCGTGATGAGGAAACGGAGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR CCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCTCCCCCAGGGGCATTaGTTGTGCTCCGGCCGTACT +
Preference number: 2 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSLPQGH*LCSGRT
Trigger: AGTACGGCCGGAGCACAACCAATGCCCCTGGGGGAG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR GCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCAGGGGCATTGGTTGTaGTCCGGCCGTACTGCCTTC +
Preference number: 2 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSQGHWL*SGRTAF
Trigger: GAAGGCAGTACGGCCGGAGCACAACCAATGCCCCTG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR GCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCTTCATGACTACCGGCTaGTGTGTTTCATCACCGTGG +
Preference number: 2 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSFMTTG*CVSSPW
Trigger: CCACGGTGATGAAACACAGCAGCCGGTAGTCATGAA...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR CCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCTTTGTCTTCAGACGCTaGACATCTCTTTCCTGTGCC +
Preference number: 2 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSFVFRR*TSLSCA
Trigger: GGCACAGGAAAGAGATGTCCAGCGTCTGAAGACAAA...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR CCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCTGGTGGCTTTCATTGTaGCTTTGTCTTCAGACGCTG +
Preference number: 2 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSWWLSL*LCLQTL
Trigger: CAGCGTCTGAAGACAAAGCCACAATGAAAGCCACCA...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR TCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGATGCCACCTGCCCTTTaGGAGTCCTTTTGGAGTCTG +
Preference number: 2 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQMPPAL*ESFWSL
Trigger: CAGACTCCAAAAGGACTCTCAAAGGGCAGGTGGCAT...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR GCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCATTTAGCTCAAAGTTaGATAATCTTTAACCTTCCC +
Preference number: 2 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSHLAQS*IIFNLP
Trigger: GGGAAGGTTAAAGATTATGCAACTTTGAGCTAAATG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR CCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGTTCCCAACCCCAGAATaGTGGCTTTCATTGTGGCTT +
Preference number: 2 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQFPTPE*WLSLWL
Trigger: AAGCCACAATGAAAGCCACCATTCTGGGGTTGGGAA...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR CAA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCCCCAGGGGCATTGGTaGTGCTCCGGCCGTACTGCC +
Preference number: 3 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSPQGHW*CSGRTA
Trigger: GGCAGTACGGCCGGAGCACAACCAATGCCCCTGGGG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR CAA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCGATGCCACCTGCCCTTaGAGAGTCCTTTTGGAGTCT +
Preference number: 3 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSDATCP*RVLLES
Trigger: AGACTCCAAAAGGACTCTCAAAGGGCAGGTGGCATC...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR CAA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGCCTCCCCCAGGGGCATaGGTTGTGCTCCGGCCGTAC +
Preference number: 3 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQPPPGA*VVLRPY
Trigger: GTACGGCCGGAGCACAACCAATGCCCCTGGGGGAGG...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR GCA 72 bp GATGAGATGATGAGCCCAAAGACACAGCGCGGTGCGTaGCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTG +
Preference number: 3 (lower is better)
Translates to: DEMMSPKTQRGA*HGGSGVRSIVL
Trigger: CAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGCTGTGTCTTTGGGCTCATCATCTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR CCA 72 bp CCCAAAGACACAGCGCGGTGCGTGCCACGGAGGAAGTaGTGTTCGCTCGATAGTCCTGAATCCTCCTGCTTA +
Preference number: 3 (lower is better)
Translates to: PKDTARCVPRRK*CSLDSPESSCL
Trigger: TAAGCAGGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGCTGTGTCTTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR CAA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCGAATGGTGGCTTTCATaGTGGCTTTGTCTTCAGACG +
Preference number: 3 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSEWWLS*WLCLQT
Trigger: CGTCTGAAGACAAAGCCACAATGAAAGCCACCATTC...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR CAA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGTGCTCCGCCATCAACTaGTCAGTCATTCATCCGGGG +
Preference number: 3 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQCSAIN*SVIHPG
Trigger: CCCCGGATGAATGACTGACAAGTTGATGGCGGAGCA...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR CAA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGTCTCAACTGCTCTTGTaGCAGCCTTCTCCAGGTCTC +
Preference number: 3 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQSQLLL*QPSPGL
Trigger: GAGACCTGGAGAAGGCTGCAACAAGAGCAGTTGAGA...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR CAA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGTCATCTCAACTGCTCTaGTTGCAGCCTTCTCCAGGT +
Preference number: 3 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQSSQLL*LQPSPG
Trigger: ACCTGGAGAAGGCTGCAACAAGAGCAGTTGAGATGA...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR-3UTR CAA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGGCTTTCATTGTGGCTTaGTCTTCAGACGCTGGACAT +
Preference number: 3 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQAFIVA*SSDAGH
Trigger: ATGTCCAGCGTCTGAAGACAAAGCCACAATGAAAGC...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
3UTR GCA 72 bp TTTCCTCATCACGAAGTGGGGGAGATAATCTTCCTGTaGAGAGGTGATGAGATGATGAGCCCAAAGACACAG +
Preference number: 3 (lower is better)
Translates to: FPHHEVGEIIFL*RGDEMMSPKTQ
Trigger: CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCCCACTTCGTGATGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCTTGGGTGGCACACTCTaGTGCAGGAGGCCTCGATCC +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSLGGTL*CRRPRS
Trigger: GGATCGAGGCCTCCTGCAGCAGAGTGTGCCACCCAA...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCATCAGCCACAGAGGGTaGTGCTGCTGGTTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSISHRG*CCWLCR
Trigger: CCTGCACAACCAGCAGCATCACCCTCTGTGGCTGAT...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCTTCTTCCTGCTGGGGTaGTCAGCTGGGATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSFFLLG*SAGMSR
Trigger: CCTGCTCATCCCAGCTGATCACCCCAGCAGGAAGAA...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCTCCACCACACTGCCTaGAGCTCTTTGGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSLHHTA*SSLGGT
Trigger: TGTGCCACCCAAAGAGCTCCAGGCAGTGTGGTGGAG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCTGCAGCAAGTCCCACTaGTGTGCAGACGTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSCSKSH*CADVCA
Trigger: AGCGCACACGTCTGCACACCAGTGGGACTTGCTGCA...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCCTTCACCCTCTCCTTaGTCAGCCACAGAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSPSPSP*SATEGD
Trigger: ATCACCCTCTGTGGCTGATCAAGGAGAGGGTGAAGG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCGGTGCTGATGGCCTCTaGAGATGTGACTGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSGADGL*RCDWPY
Trigger: GTAAGGCCAGTCACATCTCCAGAGGCCATCAGCACC...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCGCTGGGGTGATCAGCTaGGATGAGCAGGCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSAGVIS*DEQAVK
Trigger: TTTGACAGCCTGCTCATCCCAGCTGATCACCCCAGC...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCGTGCCACGGAGGAAGTaGTGTTCGCTCGATAGTCCT +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSVPRRK*CSLDSP
Trigger: AGGACTATCGAGCGAACACCACTTCCTCCGTGGCAC...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCGGTGATCAGCTGGGATaGGCAGGCTGTCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSGDQLG*AGCQSS
Trigger: AGAACTTTGACAGCCTGCTCATCCCAGCTGATCACC...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCACCAGGTAGACATATaGATGGGCACCTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSHQVDI*MGTSPE
Trigger: CTCAGGAGAGGTGCCCATGCATATGTCTACCTGGTG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCCAGGTCGTGACCACTaGAGAAAGGTTGTCGTAGAC +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSPGRDH*RKVVVD
Trigger: GTCTACGACAACCTTTCTCCAGTGGTCACGACCTGG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCCAGCAAATAACTCATaGTTGGAGAAGAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSPANNS*LEKSRT
Trigger: CGTGCGGCTCTTCTCCAAGCATGAGTTATTTGCTGG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCTTGGATACACAGAACTaGTTCAGGAAGCGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSLDTQN*FRKRSS
Trigger: GGACGAGCGCTTCCTGAAGCAGTTCTGTGTATCCAA...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCATGTCTACAGTGCACTaGCCATCGGGCCAAACCTTA +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSMSTVH*PSGQTL
Trigger: TAAGGTTTGGCCCGATGGGCAGTGCACTGTAGACAT...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCAAATAACTCATGCTTaGAGAAGAGCCGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSQITHA*RRAARP
Trigger: AGGCCGTGCGGCTCTTCTCCAAGCATGAGTTATTTG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCGCTTCACGGCCTCCATaGTGTGTGTCTCTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSASRPP*CVSLVY
Trigger: ATAAACAAGAGACACACACCATGGAGGCCGTGAAGC...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCTCCAGCCATTCTCCATaGAAGTTGATCTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSSSHSP*KLISIS
Trigger: TGAGATGGAGATCAACTTTCATGGAGAATGGCTGGA...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGTGGGCGCTGCCATTTTaGCAGAAAGCGGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQWALPF*QKAGLP
Trigger: GGGCAGGCCCGCTTTCTGTCAAAATGGCAGCGCCCA...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGCATGGGCACCTCTCCTaGGAGCTGAGCCCACCATTG +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQHGHLS*ELSPPL
Trigger: CAATGGTGGGCTCAGCTCTCAGGAGAGGTGCCCATG...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCAGAGGGCAACCAGAATaGAATATCATTGATCACAGC +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSRGQPE*NIIDHS
Trigger: GCTGTGATCAATGATATTTCATTCTGGTTGCCCTCT...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGGCGCACGCTGGGCGCTaGCATTTTGACAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQAHAGR*HFDRKR
Trigger: CCGCTTTCTGTCAAAATGGCAGCGCCCAGCGTGCGC...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGGCATCCAGTCCCGCGTaGAGCAAGTCCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQASSPA*SKSHWC
Trigger: ACACCAGTGGGACTTGCTGCACGCGGGACTGGATGC...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCTTTGTTCAAAGAGCTaGAGGCTTTCTCCATCCTTT +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSLCSKS*RLSPSF
Trigger: AAAGGATGGAGAAAGCCTGCAGCTCTTTGAACAAAG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCTGTGTCTCTTGTTTATaGGCAGAGCGAGAACTTTGT +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSCVSCL*AERELC
Trigger: ACAAAGTTCTCGCTCTGCGCATAAACAAGAGACACA...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCTGTCGTAGAGGATCATaGCTAGCCTTTCTAATCCTA +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSCRRGS*LAFLIL
Trigger: TAGGATTAGAAAGGCTAGCCATGATCCTCTACGACA...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCATTCTCCATGAAAGTTaGTCTCCATCTCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSILHES*SPSQRK
Trigger: CTTCCTTTGAGATGGAGATCAACTTTCATGGAGAAT...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCGTACAAACTTGTCTATaGGATCAACCTTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSVQTCL*DQPFPP
Trigger: TGGTGGAAAAGGTTGATCTCATAGACAAGTTTGTAC...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGCCTGAGGGTAGGATTTaGCCAGCAGCTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQPEGRI*PAAPPH
Trigger: GTGTGGTGGAGCTGCTGGGCAAATCCTACCCTCAGG...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGTGTCCCCCTTCTTCCTaGTGGGGTGATCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQCPPSS*WGDQLG
Trigger: TCCCAGCTGATCACCCCAGCAGGAAGAAGGGGGACA...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGCAAGTCCCACTGGTGTaGAGACGTGTGCGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQQVPLV*RRVRSQ
Trigger: CTGAGAGCGCACACGTCTGCACACCAGTGGGACTTG...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCAGCCTGGTAAGCGTTTaGTTAAGATCAAACTCTACA +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSSLVSV*LRSNST
Trigger: TGTAGAGTTTGATCTTAAGCAAACGCTTACCAGGCT...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGCTGCCTGGAGCTCTTTaGGTGGCACACTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQLPGAL*VAHSAA
Trigger: TGCAGCAGAGTGTGCCACCCAAAGAGCTCCAGGCAG...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGCAGCCGATTCGGTCTTaGGCACCAGCTGAATTGACC +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQQPIRS*APAELT
Trigger: GGTCAATTCAGCTGGTGCTCAAGACCGAATCGGCTG...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCAGAATGAAATATCATTaGTCACAGCCGGATATTTGC +
Preference number: 4 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSRMKYH*SQPDIC
Trigger: GCAAATATCCGGCTGTGATCAATGATATTTCATTCT...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGCCATGTGGCGGTACGTaGTGCGGTAGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQEPCGGT*CGSSGW
Trigger: CCAGCCACTGCTACCGCATCACGTACCGCCACATGG...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCCCTGGTGGATGTGCCTaGCCTCTCTCTGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPPGGCA*PLSGTE
Trigger: CTCTGTCCCAGAGAGAGGTCAGGCACATCCACCAGG...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCGCGCACGCTGGGCGCTaGCATTTTGACAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPAHAGR*HFDRKR
Trigger: CCGCTTTCTGTCAAAATGGCAGCGCCCAGCGTGCGC...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCTGGACTGCAGCCTCCTaGAAGGCCTGGTGGATGTGC +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPWTAAS*KAWWMC
Trigger: GCACATCCACCAGGCCTTGCAGGAGGCTGCAGTCCA...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGACCTCTCCTGAGAGCTaGGCCCACCATTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQTSPES*AHHCRN
Trigger: GTTTCTACAATGGTGGGCTCAGCTCTCAGGAGAGGT...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGCATGGGCACCTCTCCTaGGAGCTGAGCCCACCATTG +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQEHGHLS*ELSPPL
Trigger: CAATGGTGGGCTCAGCTCTCAGGAGAGGTGCCCATG...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCATCAGCCACAGAGGGTaGTGCTGCTGGTTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPISHRG*CCWLCR
Trigger: CCTGCACAACCAGCAGCATCACCCTCTGTGGCTGAT...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGAGTTCTGCCAGGTCGTaGCCACTGGAGAAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQSSARS*PLEKGC
Trigger: ACAACCTTTCTCCAGTGGTCACGACCTGGCAGAACT...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCTTCTTCCTGCTGGGGTaGTCAGCTGGGATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPFFLLG*SAGMSR
Trigger: CCTGCTCATCCCAGCTGATCACCCCAGCAGGAAGAA...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCGGGCTGCAGCCTGAGTaGAGTGGTGACATCAGAACC +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPGLQPE*SGDIRT
Trigger: GGTTCTGATGTCACCACTTCACTCAGGCTGCAGCCC...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCCCTGAGGGTAGGATTTaGCCAGCAGCTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPPEGRI*PAAPPH
Trigger: GTGTGGTGGAGCTGCTGGGCAAATCCTACCCTCAGG...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGAGGCTGTCAAAGTTCTaGCAGGTCGTGACCACTGGA +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQRLSKF*QVVTTG
Trigger: TCCAGTGGTCACGACCTGGCAGAACTTTGACAGCCT...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCTGTCCCCCTTCTTCCTaGTGGGGTGATCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPCPPSS*WGDQLG
Trigger: TCCCAGCTGATCACCCCAGCAGGAAGAAGGGGGACA...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCCAAGTCCCACTGGTGTaGAGACGTGTGCGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPQVPLV*RRVRSQ
Trigger: CTGAGAGCGCACACGTCTGCACACCAGTGGGACTTG...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGGCATCCAGTCCCGCGTaGAGCAAGTCCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQEASSPA*SKSHWC
Trigger: ACACCAGTGGGACTTGCTGCACGCGGGACTGGATGC...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGGCCTGGTGGATGTaGCTGACCTCTCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPKAWWM*LTSLWD
Trigger: GTCCCAGAGAGAGGTCAGGCACATCCACCAGGCCTT...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGACCCAACAGCTGGACTaGAGCCTCCTGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQETQQLD*SLLQGL
Trigger: CAGGCCTTGCAGGAGGCTGCAGTCCAGCTGTTGGGT...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGGAGCCCCAAGAGGGCTaGAGCCTGAGTGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQEEPQEG*SLSEVV
Trigger: CACCACTTCACTCAGGCTGCAGCCCTCTTGGGGCTC...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCCTCCACCACACTGCCTaGAGCTCTTTGGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPLHHTA*SSLGGT
Trigger: TGTGCCACCCAAAGAGCTCCAGGCAGTGTGGTGGAG...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCTGCAGCAAGTCCCACTaGTGTGCAGACGTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPCSKSH*CADVCA
Trigger: AGCGCACACGTCTGCACACCAGTGGGACTTGCTGCA...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCTCCTGCAAGGCCTGGTaGATGTGCCTGACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPSCKAW*MCLTSL
Trigger: GAGAGAGGTCAGGCACATCCACCAGGCCTTGCAGGA...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGGCCTCCTGCAAGGCCTaGTGGATGTGCCTGACCTCT +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQEASCKA*WMCLTS
Trigger: AGAGGTCAGGCACATCCACCAGGCCTTGCAGGAGGC...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGTTCATGACTACCGGCTaGTGTGTTTCATCACCGTGG +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQFMTTG*CVSSPW
Trigger: CCACGGTGATGAAACACAGCAGCCGGTAGTCATGAA...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGCTCTGGAGATGTGACTaGCCTTACTCACCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQLWRCD*PYSPGR
Trigger: TCTACCTGGTGAGTAAGGCCAGTCACATCTCCAGAG...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGCTGCCTGGAGCTCTTTaGGTGGCACACTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQELPGAL*VAHSAA
Trigger: TGCAGCAGAGTGTGCCACCCAAAGAGCTCCAGGCAG...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCGCTGGGGTGATCAGCTaGGATGAGCAGGCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPAGVIS*DEQAVK
Trigger: TTTGACAGCCTGCTCATCCCAGCTGATCACCCCAGC...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAGTTCTGCCAGGTCGTaGCCACTGGAGAAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPSSARS*PLEKGC
Trigger: ACAACCTTTCTCCAGTGGTCACGACCTGGCAGAACT...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGGAGCACCAGCTGAATTaGCCAGTTGTTGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQEHQLN*PVVVPS
Trigger: TGATGGAACAACAACTGGTCAATTCAGCTGGTGCTC...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR TCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGCAGCCGATTCGGTCTTaGGCACCAGCTGAATTGACC +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQEQPIRS*APAELT
Trigger: GGTCAATTCAGCTGGTGCTCAAGACCGAATCGGCTG...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGGTGGCACACTCTGCTaGAGGAGGCCTCGATCCCCA +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILGGTLC*RRPRSP
Trigger: TGGGGATCGAGGCCTCCTGCAGCAGAGTGTGCCACC...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAGGCTGTCAAAGTTCTaGCAGGTCGTGACCACTGGA +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPRLSKF*QVVTTG
Trigger: TCCAGTGGTCACGACCTGGCAGAACTTTGACAGCCT...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGGGTGCTGATGGCCTCTaGAGATGTGACTGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQEGADGL*RCDWPY
Trigger: GTAAGGCCAGTCACATCTCCAGAGGCCATCAGCACC...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCCCAGGTCGTGACCACTaGAGAAAGGTTGTCGTAGAC +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPPGRDH*RKVVVD
Trigger: GTCTACGACAACCTTTCTCCAGTGGTCACGACCTGG...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGTGGTGGCTTTCATTGTaGCTTTGTCTTCAGACGCTG +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQWWLSL*LCLQTL
Trigger: CAGCGTCTGAAGACAAAGCCACAATGAAAGCCACCA...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR GCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGTTGGGTGGCACACTCTaGTGCAGGAGGCCTCGATCC +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILLGGTL*CRRPRS
Trigger: GGATCGAGGCCTCCTGCAGCAGAGTGTGCCACCCAA...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCCTCTGGAGATGTGACTaGCCTTACTCACCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPLWRCD*PYSPGR
Trigger: TCTACCTGGTGAGTAAGGCCAGTCACATCTCCAGAG...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGTGGCCTCTGGAGATGTaGCTGGCCTTACTCACCAGG +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILWPLEM*LALLTR
Trigger: CCTGGTGAGTAAGGCCAGTCACATCTCCAGAGGCCA...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGCCAGCAAATAACTCATaGTTGGAGAAGAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQEPANNS*LEKSRT
Trigger: CGTGCGGCTCTTCTCCAAGCATGAGTTATTTGCTGG...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGTTGGATACACAGAACTaGTTCAGGAAGCGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQELDTQN*FRKRSS
Trigger: GGACGAGCGCTTCCTGAAGCAGTTCTGTGTATCCAA...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGCTGGAGCTCTTTGGGTaGCACACTCTGCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILLELFG*HTLLQE
Trigger: CTCCTGCAGCAGAGTGTGCCACCCAAAGAGCTCCAG...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCGCTTCACGGCCTCCATaGTGTGTGTCTCTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPASRPP*CVSLVY
Trigger: ATAAACAAGAGACACACACCATGGAGGCCGTGAAGC...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGTCCACACCCAACAGCTaGACTGCAGCCTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILSTPNS*TAASCK
Trigger: CTTGCAGGAGGCTGCAGTCCAGCTGTTGGGTGTGGA...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGCCTTCACCCTCTCCTTaGTCAGCCACAGAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILPSPSP*SATEGD
Trigger: ATCACCCTCTGTGGCTGATCAAGGAGAGGGTGAAGG...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGGTGACATCAGAACCTaGCCTCCACACCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILGDIRT*PPHPTA
Trigger: AGCTGTTGGGTGTGGAGGGCAGGTTCTGATGTCACC...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGTGCCTGACCTCTCTCTaGGACAGAGTCCGTTCCATG +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILCLTSL*DRVRSM
Trigger: CATGGAACGGACTCTGTCCCAGAGAGAGGTCAGGCA...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGACCTCTCCTGAGAGCTaGGCCCACCATTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILTSPES*AHHCRN
Trigger: GTTTCTACAATGGTGGGCTCAGCTCTCAGGAGAGGT...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGGTGATCAGCTGGGATaGGCAGGCTGTCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILGDQLG*AGCQSS
Trigger: AGAACTTTGACAGCCTGCTCATCCCAGCTGATCACC...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGTCCAGCCATTCTCCATaGAAGTTGATCTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQESSHSP*KLISIS
Trigger: TGAGATGGAGATCAACTTTCATGGAGAATGGCTGGA...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGCACCAGGTAGACATATaGATGGGCACCTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILHQVDI*MGTSPE
Trigger: CTCAGGAGAGGTGCCCATGCATATGTCTACCTGGTG...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGTGCGGTAGCAGTGGCTaGTCTTGTGCGTCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILCGSSG*SCASLD
Trigger: ATCCAAAGACGCACAAGACCAGCCACTGCTACCGCA...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCATTCTCCATGAAAGTTaGTCTCCATCTCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPILHES*SPSQRK
Trigger: CTTCCTTTGAGATGGAGATCAACTTTCATGGAGAAT...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCGTACAAACTTGTCTATaGGATCAACCTTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPVQTCL*DQPFPP
Trigger: TGGTGGAAAAGGTTGATCTCATAGACAAGTTTGTAC...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCTTATCAAAAGATGATTaGTGCCCCAGTTCACAAACC +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPLSKDD*CPSSQT
Trigger: GGTTTGTGAACTGGGGCATCAATCATCTTTTGATAA...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ACAGAAAAGAGCCAGACAGATCTTTCTGAAATGCCTATAGATATGCGTAGAATTTGGCGCCGCCTGAATTaGCCAGTTGTTGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: TEKSQTDLSEMPIDMRRIWRRLN*PVVVPS
Trigger: TGATGGAACAACAACTGGTCAATTCAGGCGGCGCCA...AATTCTACGCATATCTATAGGCATTTCAGAAAGATCTGTCTGGCTCTTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445533.1
CDS-3UTR GCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGCTTTGTTCAAAGAGCTaGAGGCTTTCTCCATCCTTT +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQELCSKS*RLSPSF
Trigger: AAAGGATGGAGAAAGCCTGCAGCTCTTTGAACAAAG...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGTGTGTCTCTTGTTTATaGGCAGAGCGAGAACTTTGT +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQECVSCL*AERELC
Trigger: ACAAAGTTCTCGCTCTGCGCATAAACAAGAGACACA...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGATAGAAATCATTTTCTaGGTAATTCTCAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQIEIIF*VILRGQ
Trigger: TTGCCCTCTGAGAATTACGCAGAAAATGATTTCTAT...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGCAAATAACTCATGCTTaGAGAAGAGCCGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILQITHA*RRAARP
Trigger: AGGCCGTGCGGCTCTTCTCCAAGCATGAGTTATTTG...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCGGTCTTGTGCGTCTTTaGATGTACAAACTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPGLVRL*MYKLVY
Trigger: ATAGACAAGTTTGTACATCCAAAGACGCACAAGACC...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCACCAGCTGAATTaGCCAGTTGTTGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILEHQLN*PVVVPS
Trigger: TGATGGAACAACAACTGGTCAATTCAGCTGGTGCTC...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGCCATTTATCAAAAGATaGTTGATGCCCCAGTTCACA +
Preference number: 4 (lower is better)
Translates to: PVHKPYLFLFQQILEPQEPFIKR*LMPQFT
Trigger: TGTGAACTGGGGCATCAATCATCTTTTGATAAATGG...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGCAGTGGCTGGTCTTGTaGGTCTTTGGATGTACAAAC +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILQWLVL*VFGCTN
Trigger: GTTTGTACATCCAAAGACGCACAAGACCAGCCACTG...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCATAGAAATCATTTTCTaGGTAATTCTCAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPIEIIF*VILRGQ
Trigger: TTGCCCTCTGAGAATTACGCAGAAAATGATTTCTAT...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CCA 90 bp AATGGTCTTACAGAAAAGAGCCAGACAGATCTTTCTGAAATGCCTATAGATATGGCTTCACGGCCTCCATaGTGTGTGTCTCTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: NGLTEKSQTDLSEMPIDMASRPP*CVSLVY
Trigger: ATAAACAAGAGACACACACCATGGAGGCCGTGAAGC...CATATCTATAGGCATTTCAGAAAGATCTGTCTGGCTCTTTTCTGTAAGACCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445533.1
CDS-3UTR TCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGAGAGGGCAACCAGAATaGAATATCATTGATCACAGC +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILRGQPE*NIIDHS
Trigger: GCTGTGATCAATGATATTTCATTCTGGTTGCCCTCT...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp CCTATAGATATGCGTAGAATTCAATCAGCAACCTCGTGTTTCCATTTTCTCTCACCAGACAGATCTTTCTaGAATGCCTATAGATATGCG +
Preference number: 4 (lower is better)
Translates to: PIDMRRIQSATSCFHFLSPDRSF*NAYRYA
Trigger: CGCATATCTATAGGCATTTCAGAAAGATCTGTCTGG...TGAGAGAAAATGGAAACACGAGGTTGCTGATTGAATTCTACGCATATCTATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445533.1
CDS-3UTR GCA 90 bp AGCAATGGTCTTACAGAAAAGAGCCAGACAGATCTTTCTGAAATGCCTATAGATCTTTGTTCAAAGAGCTaGAGGCTTTCTCCATCCTTT +
Preference number: 4 (lower is better)
Translates to: SNGLTEKSQTDLSEMPIDLCSKS*RLSPSF
Trigger: AAAGGATGGAGAAAGCCTGCAGCTCTTTGAACAAAG...ATCTATAGGCATTTCAGAAAGATCTGTCTGGCTCTTTTCTGTAAGACCATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445533.1
CDS-3UTR CCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGTGTCGTAGAGGATCATaGCTAGCCTTTCTAATCCTA +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILCRRGS*LAFLIL
Trigger: TAGGATTAGAAAGGCTAGCCATGATCCTCTACGACA...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp AGCAATGGTCTTACAGAAAAGAGCCAGACAGATCTTTCTGAAATGCCTATAGATATTCTCCATGAAAGTTaGTCTCCATCTCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SNGLTEKSQTDLSEMPIDILHES*SPSQRK
Trigger: CTTCCTTTGAGATGGAGATCAACTTTCATGGAGAAT...ATCTATAGGCATTTCAGAAAGATCTGTCTGGCTCTTTTCTGTAAGACCATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445533.1
CDS-3UTR TCA 90 bp CCATCATTTTTATTAAGCAATGGTCTTACAGAAAAGAGCCAGACAGATCTTTCTTCCAGCCATTCTCCATaGAAGTTGATCTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: PSFLLSNGLTEKSQTDLSSSHSP*KLISIS
Trigger: TGAGATGGAGATCAACTTTCATGGAGAATGGCTGGA...AGAAAGATCTGTCTGGCTCTTTTCTGTAAGACCATTGCTTAATAAAAATGATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445533.1
CDS-3UTR GCA 90 bp GAAATGCCTATAGATATGCGTAGAATTCAATCAGCAACCTCGTGTTTCCATTTTTGTGTCTCTTGTTTATaGGCAGAGCGAGAACTTTGT +
Preference number: 4 (lower is better)
Translates to: EMPIDMRRIQSATSCFHFCVSCL*AERELC
Trigger: ACAAAGTTCTCGCTCTGCGCATAAACAAGAGACACA...AAAATGGAAACACGAGGTTGCTGATTGAATTCTACGCATATCTATAGGCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445533.1
CDS-3UTR GCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGAGCCTGGTAAGCGTTTaGTTAAGATCAAACTCTACA +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILSLVSV*LRSNST
Trigger: TGTAGAGTTTGATCTTAAGCAAACGCTTACCAGGCT...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR TCA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGAGAATGAAATATCATTaGTCACAGCCGGATATTTGC +
Preference number: 4 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILRMKYH*SQPDIC
Trigger: GCAAATATCCGGCTGTGATCAATGATATTTCATTCT...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR GCA 90 bp AATGGTCTTACAGAAAAGAGCCAGACAGATCTTTCTGAAATGCCTATAGATATGAGCCTGGTAAGCGTTTaGTTAAGATCAAACTCTACA +
Preference number: 4 (lower is better)
Translates to: NGLTEKSQTDLSEMPIDMSLVSV*LRSNST
Trigger: TGTAGAGTTTGATCTTAAGCAAACGCTTACCAGGCT...CATATCTATAGGCATTTCAGAAAGATCTGTCTGGCTCTTTTCTGTAAGACCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445533.1
CDS GCA 90 bp GAATGCCTGGGCCTCCGATATCCGTCCGCCAGGAGCTTGGCTGGATaGACGGGCGGCCAGTCCTCTTATTTCCCCGCCCTCCCGCCGCGT +
Preference number: 5 (lower is better)
Translates to: ECLGLRYPSARSLAG*TGGQSSYFPALPPR
Trigger: ACGCGGCGGGAGGGCGGGGAAATAAGAGGACTGGCCGCCCGTGCATCCAGCCAAGCTCCTGGCGGACGGATATCGGAGGCCCAGGCATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324331.10
CDS GCA 90 bp ATACCCGCGCACGCTGGGCGCTGCCATTTTGACAGAAAGCGGGCCTaGCCCAGAGGCCCCTACGCAGGTCGCCCTGAGCAGAGCCGGAGT +
Preference number: 5 (lower is better)
Translates to: IPAHAGRCHFDRKRA*PRGPYAGRPEQSRS
Trigger: ACTCCGGCTCTGCTCAGGGCGACCTGCGTAGGGGCCTCTGGGGCAGGCCCGCTTTCTGTCAAAATGGCAGCGCCCAGCGTGCGCGGGTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602691.1
CDS CCA 90 bp CGTCCCTCGAATGCCTGGGCCTCCGATATCCGTCCGCCAGGAGCTTaGCTGGATGCACGGGCGGCCAGTCCTCTTATTTCCCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RPSNAWASDIRPPGA*LDARAASPLISPPS
Trigger: GGAGGGCGGGGAAATAAGAGGACTGGCCGCCCGTGCATCCAGCCAAGCTCCTGGCGGACGGATATCGGAGGCCCAGGCATTCGAGGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324331.10
CDS-3UTR CAA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCCTCCCCCAGGGGCATaGGTTGTGCTCCGGCCGTAC +
Preference number: 5 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSPPPGA*VVLRPY
Trigger: GTACGGCCGGAGCACAACCAATGCCCCTGGGGGAGG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CAA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCTGGGCGCTGCCATTTaGACAGAAAGCGGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSLGAAI*TESGPA
Trigger: GGCAGGCCCGCTTTCTGTCAAAATGGCAGCGCCCAG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS GCA 90 bp TGTGGTCGTCCTGAGGGTAGGATTTGCCCAGCAGCTCCACCACACTaGCTGGAGCTCTTTGGGTGGCACACTCTGCTGCAGGAGGCCTCG +
Preference number: 5 (lower is better)
Translates to: CGRPEGRICPAAPPH*LELFGWHTLLQEAS
Trigger: CGAGGCCTCCTGCAGCAGAGTGTGCCACCCAAAGAGCTCCAGGCAGTGTGGTGGAGCTGCTGGGCAAATCCTACCCTCAGGACGACCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000648580.1
CDS CCA 90 bp CCCTCCACACCCAACAGCTGGACTGCAGCCTCCTGCAAGGCCTGGTaGATGTGCCTGACCTCTCTCTGGGACAGAGTCCGTTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: PSTPNSWTAASCKAW*MCLTSLWDRVRSMW
Trigger: CCACATGGAACGGACTCTGTCCCAGAGAGAGGTCAGGCACATCCACCAGGCCTTGCAGGAGGCTGCAGTCCAGCTGTTGGGTGTGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274680.9
ENST00000324331.10
CDS CCA 90 bp CTGCCCTCCACACCCAACAGCTGGACTGCAGCCTCCTGCAAGGCCTaGTGGATGTGCCTGACCTCTCTCTGGGACAGAGTCCGTTCCATG +
Preference number: 5 (lower is better)
Translates to: LPSTPNSWTAASCKA*WMCLTSLWDRVRSM
Trigger: CATGGAACGGACTCTGTCCCAGAGAGAGGTCAGGCACATCCACCAGGCCTTGCAGGAGGCTGCAGTCCAGCTGTTGGGTGTGGAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274680.9
ENST00000324331.10
CDS CCA 90 bp TTCCCAAAGGCTCTCCGTGATGCAACTGCACGTCCCTCGAATGCCTaGGCCTCCGATATCCGTCCGCCAGGAGCTTGGCTGGATGCACGG +
Preference number: 5 (lower is better)
Translates to: FPKALRDATARPSNA*ASDIRPPGAWLDAR
Trigger: CCGTGCATCCAGCCAAGCTCCTGGCGGACGGATATCGGAGGCCCAGGCATTCGAGGGACGTGCAGTTGCATCACGGAGAGCCTTTGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324331.10
CDS-3UTR CAA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCACTGCCTGGAGCTCTTaGGGTGGCACACTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSTAWSS*GGTLCC
Trigger: GCAGCAGAGTGTGCCACCCAAAGAGCTCCAGGCAGT...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS GCA 90 bp ACACCCAACAGCTGGACTGCAGCCTCCTGCAAGGCCTGGTGGATGTaGCTGACCTCTCTCTGGGACAGAGTCCGTTCCATGTGGCGGTAC +
Preference number: 5 (lower is better)
Translates to: TPNSWTAASCKAWWM*LTSLWDRVRSMWRY
Trigger: GTACCGCCACATGGAACGGACTCTGTCCCAGAGAGAGGTCAGGCACATCCACCAGGCCTTGCAGGAGGCTGCAGTCCAGCTGTTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274680.9
ENST00000324331.10
CDS GCA 90 bp CATCAGAACCTGCCCTCCACACCCAACAGCTGGACTGCAGCCTCCTaGAAGGCCTGGTGGATGTGCCTGACCTCTCTCTGGGACAGAGTC +
Preference number: 5 (lower is better)
Translates to: HQNLPSTPNSWTAAS*KAWWMCLTSLWDRV
Trigger: GACTCTGTCCCAGAGAGAGGTCAGGCACATCCACCAGGCCTTGCAGGAGGCTGCAGTCCAGCTGTTGGGTGTGGAGGGCAGGTTCTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS GCA 90 bp CTCATCACCTCCACACCCAGACGTCGCATCCCCCGGCCTGAGGAATaGCAAGAAACCCCACCCTGCCGACCAGGATCAGGCGAAATCAAG +
Preference number: 5 (lower is better)
Translates to: LITSTPRRRIPRPEE*QETPPCRPGSGEIK
Trigger: CTTGATTTCGCCTGATCCTGGTCGGCAGGGTGGGGTTTCTTGGCATTCCTCAGGCCGGGGGATGCGACGTCTGGGTGTGGAGGTGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602691.1
CDS TCA 90 bp CAAATGTCTCCGCCAAGACCCCAGACGGTTCCCAAAGGCTCTCCGTaGTGCAACTGCACGTCCCTCGAATGCCTGGGCCTCCGATATCCG +
Preference number: 5 (lower is better)
Translates to: QMSPPRPQTVPKGSP*CNCTSLECLGLRYP
Trigger: CGGATATCGGAGGCCCAGGCATTCGAGGGACGTGCAGTTGCATCACGGAGAGCCTTTGGGAACCGTCTGGGGTCTTGGCGGAGACATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324331.10
CDS GCA 90 bp AGACGTCGCATCCCCCGGCCTGAGGAATGCCAAGAAACCCCACCCTaGCGACCAGGATCAGGCGAAATCAAGTCACCCTTGAAATCCCGC +
Preference number: 5 (lower is better)
Translates to: RRRIPRPEECQETPP*RPGSGEIKSPLKSR
Trigger: GCGGGATTTCAAGGGTGACTTGATTTCGCCTGATCCTGGTCGGCAGGGTGGGGTTTCTTGGCATTCCTCAGGCCGGGGGATGCGACGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602691.1
CDS-3UTR CAA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCGCAAATAACTCATGCTaGGAGAAGAGCCGCACGGCC +
Preference number: 5 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSANNSC*EKSRTA
Trigger: GGCCGTGCGGCTCTTCTCCAAGCATGAGTTATTTGC...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CAA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCATGGTGTGTGTCTCTaGTTTATGCGCAGAGCGAGA +
Preference number: 5 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSHGVCL*FMRRAR
Trigger: TCTCGCTCTGCGCATAAACAAGAGACACACACCATG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CAA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCTCATCTCAACTGCTCTaGTTGCAGCCTTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSSSQLL*LQPSPG
Trigger: ACCTGGAGAAGGCTGCAACAAGAGCAGTTGAGATGA...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS TCA 90 bp AGCGGCCCACATACTGCTTGTAGAAGTGCTCCTTCACCCTCTCCTTaGTCAGCCACAGAGGGTGATGCTGCTGGTTGTGCAGGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SGPHTACRSAPSPSP*SATEGDAAGCAGSC
Trigger: GCAGGAACCTGCACAACCAGCAGCATCACCCTCTGTGGCTGATCAAGGAGAGGGTGAAGGAGCACTTCTACAAGCAGTATGTGGGCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000648580.1
CDS-3UTR CAA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCCCAGGTCTCCTCCAATaGTTCGGACTAAGTCATAGA +
Preference number: 5 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSPGLLQ*FGLSHR
Trigger: TCTATGACTTAGTCCGAACAATTGGAGGAGACCTGG...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CAA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCGCTTTCATTGTGGCTTaGTCTTCAGACGCTGGACAT +
Preference number: 5 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSAFIVA*SSDAGH
Trigger: ATGTCCAGCGTCTGAAGACAAAGCCACAATGAAAGC...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CAA 90 bp GCGCGGTGCGTGCCACGGAGGAAGTGGTGTTCGCTCGATAGTCCTGAATCCTCCGAGCCTGGTAAGCGTTaGCTTAAGATCAAACTCTAC +
Preference number: 5 (lower is better)
Translates to: ARCVPRRKWCSLDSPESSEPGKR*LKIKLY
Trigger: GTAGAGTTTGATCTTAAGCAAACGCTTACCAGGCTC...GGAGGATTCAGGACTATCGAGCGAACACCACTTCCTCCGTGGCACGCACCGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS TCA 90 bp CTTACTCACCAGGTAGACATATGCATGGGCACCTCTCCTGAGAGCTaGGCCCACCATTGTAGAAACTTCTCACAGGTTCCACCGCTCGCC +
Preference number: 5 (lower is better)
Translates to: LTHQVDICMGTSPES*AHHCRNFSQVPPLA
Trigger: GGCGAGCGGTGGAACCTGTGAGAAGTTTCTACAATGGTGGGCTCAGCTCTCAGGAGAGGTGCCCATGCATATGTCTACCTGGTGAGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274680.9
ENST00000648580.1
CDS CCA 90 bp CCTCACACCAGAAGAGACGGATATCAGGGATGTCGTAGAGGATCATaGCTAGCCTTTCTAATCCTAGGCCAAAAGCCCAGCCGATTCGGT +
Preference number: 5 (lower is better)
Translates to: PHTRRDGYQGCRRGS*LAFLILGQKPSRFG
Trigger: ACCGAATCGGCTGGGCTTTTGGCCTAGGATTAGAAAGGCTAGCCATGATCCTCTACGACATCCCTGATATCCGTCTCTTCTGGTGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000648580.1
CDS-3UTR CAA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCACTGCCTGGAGCTCTTaGGGTGGCACACTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPTAWSS*GGTLCC
Trigger: GCAGCAGAGTGTGCCACCCAAAGAGCTCCAGGCAGT...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CAA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGGATGCCACCTGCCCTTaGAGAGTCCTTTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQDATCP*RVLLES
Trigger: AGACTCCAAAAGGACTCTCAAAGGGCAGGTGGCATC...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS GCA 90 bp AACTCTACAAGCTTCACGGCCTCCATGGTGTGTGTCTCTTGTTTATaGGCAGAGCGAGAACTTTGTTCAAAGAGCTGCAGGCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: NSTSFTASMVCVSCL*AERELCSKSCRLSP
Trigger: TGGAGAAAGCCTGCAGCTCTTTGAACAAAGTTCTCGCTCTGCGCATAAACAAGAGACACACACCATGGAGGCCGTGAAGCTTGTAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000445533.1
ENST00000648580.1
CDS-3UTR CAA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGGCAAATAACTCATGCTaGGAGAAGAGCCGCACGGCC +
Preference number: 5 (lower is better)
Translates to: PVHKPYLFLFQQILEPQEANNSC*EKSRTA
Trigger: GGCCGTGCGGCTCTTCTCCAAGCATGAGTTATTTGC...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS GCA 90 bp TCCAGCTCATCTCCAAAAAGATGTGCCATGAGCCTGGTAAGCGTTTaGTTAAGATCAAACTCTACAAGCTTCACGGCCTCCATGGTGTGT +
Preference number: 5 (lower is better)
Translates to: SSSSPKRCAMSLVSV*LRSNSTSFTASMVC
Trigger: ACACACCATGGAGGCCGTGAAGCTTGTAGAGTTTGATCTTAAGCAAACGCTTACCAGGCTCATGGCACATCTTTTTGGAGATGAGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000445533.1
ENST00000648580.1
CDS TCA 90 bp AGCAGTGGCTGGTCTTGTGCGTCTTTGGATGTACAAACTTGTCTATaGGATCAACCTTTTCCACCAGGTCTCCTCCAATTGTTCGGACTA +
Preference number: 5 (lower is better)
Translates to: SSGWSCASLDVQTCL*DQPFPPGLLQLFGL
Trigger: TAGTCCGAACAATTGGAGGAGACCTGGTGGAAAAGGTTGATCTCATAGACAAGTTTGTACATCCAAAGACGCACAAGACCAGCCACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274680.9
ENST00000324331.10
CDS-3UTR CAA 90 bp CCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCAAGAGCATGGTGTGTGTCTCTaGTTTATGCGCAGAGCGAGA +
Preference number: 5 (lower is better)
Translates to: PVHKPYLFLFQQILEPQEHGVCL*FMRRAR
Trigger: TCTCGCTCTGCGCATAAACAAGAGACACACACCATG...CTCTTGGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CAA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCCCAGGTCTCCTCCAATaGTTCGGACTAAGTCATAGA +
Preference number: 5 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPPGLLQ*FGLSHR
Trigger: TCTATGACTTAGTCCGAACAATTGGAGGAGACCTGG...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CAA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCGAGCCTGGTAAGCGTTaGCTTAAGATCAAACTCTAC +
Preference number: 5 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPEPGKR*LKIKLY
Trigger: GTAGAGTTTGATCTTAAGCAAACGCTTACCAGGCTC...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CAA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGTCCAGGGAGACTTTTTaGGATGTACAAACTTGTCTA +
Preference number: 5 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQSRETF*DVQTCL
Trigger: TAGACAAGTTTGTACATCCAAAAAAGTCTCCCTGGA...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CAA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGCGCAGAGCGAGAACTTaGTTCAAAGAGCTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILRRART*FKELQA
Trigger: AGCCTGCAGCTCTTTGAACAAAGTTCTCGCTCTGCG...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CAA 90 bp GGGGAGATAATCTTCCTGTGCAGAGGTGATGAGATGATGAGCCCAAAGACACAGCAGAATGAAATATCATaGATCACAGCCGGATATTTG +
Preference number: 5 (lower is better)
Translates to: GEIIFLCRGDEMMSPKTQQNEIS*ITAGYL
Trigger: CAAATATCCGGCTGTGATCAATGATATTTCATTCTG...CTGTGTCTTTGGGCTCATCATCTCATCACCTCTGCACAGGAAGATTATCTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648580.1
CDS-3UTR CAA 90 bp ATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGGAGCCCCTGGTCTTGTGCGTCTTaGGATGTACAAACTTGTCTA +
Preference number: 5 (lower is better)
Translates to: MPQFTNHIFFSFSKSWSPWSCAS*DVQTCL
Trigger: TAGACAAGTTTGTACATCCAAAGACGCACAAGACCA...GGGGCTCCAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS-3UTR CAA 90 bp ACAGAAAAGAGCCAGACAGATCTTTCTGAAATGCCTATAGATATGCGTAGAATTGTGGCGCCGCCTGAATaGACCAGTTGTTGTTCCATC +
Preference number: 5 (lower is better)
Translates to: TEKSQTDLSEMPIDMRRIVAPPE*TSCCSI
Trigger: GATGGAACAACAACTGGTCAATTCAGGCGGCGCCAC...AATTCTACGCATATCTATAGGCATTTCAGAAAGATCTGTCTGGCTCTTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445533.1
CDS GCA 90 bp TGTGTCTCTTGTTTATGCGCAGAGCGAGAACTTTGTTCAAAGAGCTaGAGGCTTTCTCCATCCTTTATACCAGCAAATAACTCATGCTTG +
Preference number: 5 (lower is better)
Translates to: CVSCLCAERELCSKS*RLSPSFIPANNSCL
Trigger: CAAGCATGAGTTATTTGCTGGTATAAAGGATGGAGAAAGCCTGCAGCTCTTTGAACAAAGTTCTCGCTCTGCGCATAAACAAGAGACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000648580.1
CDS-3UTR CAA 90 bp ACAGAAAAGAGCCAGACAGATCTTTCTGAAATGCCTATAGATATGCGTAGAATTCATGGTGTGTGTCTCTaGTTTATGCGCAGAGCGAGA +
Preference number: 5 (lower is better)
Translates to: TEKSQTDLSEMPIDMRRIHGVCL*FMRRAR
Trigger: TCTCGCTCTGCGCATAAACAAGAGACACACACCATG...AATTCTACGCATATCTATAGGCATTTCAGAAAGATCTGTCTGGCTCTTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445533.1
CDS-3UTR CAA 90 bp AGCAATGGTCTTACAGAAAAGAGCCAGACAGATCTTTCTGAAATGCCTATAGATGAGCCTGGTAAGCGTTaGCTTAAGATCAAACTCTAC +
Preference number: 5 (lower is better)
Translates to: SNGLTEKSQTDLSEMPIDEPGKR*LKIKLY
Trigger: GTAGAGTTTGATCTTAAGCAAACGCTTACCAGGCTC...ATCTATAGGCATTTCAGAAAGATCTGTCTGGCTCTTTTCTGTAAGACCATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445533.1
CDS TCA 90 bp GTCATAGAAATCATTTTCTGCGTAATTCTCAGAGGGCAACCAGAATaGAATATCATTGATCACAGCCGGATATTTGCTAAGAGGCTGAAA +
Preference number: 5 (lower is better)
Translates to: VIEIIFCVILRGQPE*NIIDHSRIFAKRLK
Trigger: TTTCAGCCTCTTAGCAAATATCCGGCTGTGATCAATGATATTTCATTCTGGTTGCCCTCTGAGAATTACGCAGAAAATGATTTCTATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000648580.1
CDS-3UTR CAA 90 bp ATGATTGATGCCCCAGTTCACAAACCATATCTTTTTCTCTTTCAGCAAATCCTGCAGAATGAAATATCATaGATCACAGCCGGATATTTG +
Preference number: 5 (lower is better)
Translates to: MIDAPVHKPYLFLFQQILQNEIS*ITAGYL
Trigger: CAAATATCCGGCTGTGATCAATGATATTTCATTCTG...CAGGATTTGCTGAAAGAGAAAAAGATATGGTTTGTGAACTGGGGCATCAATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS GCA 72 bp CACGCTGGGCGCTGCCATTTTGACAGAAAGCGGGCCTaGCCCAGAGGCCCCTACGCAGGTCGCCCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: HAGRCHFDRKRA*PRGPYAGRPEQ
Trigger: CTGCTCAGGGCGACCTGCGTAGGGGCCTCTGGGGCAGGCCCGCTTTCTGTCAAAATGGCAGCGCCCAGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602691.1
CDS GCA 72 bp GGCCTCCGATATCCGTCCGCCAGGAGCTTGGCTGGATaGACGGGCGGCCAGTCCTCTTATTTCCCCGCCCTC +
Preference number: 6 (lower is better)
Translates to: GLRYPSARSLAG*TGGQSSYFPAL
Trigger: GAGGGCGGGGAAATAAGAGGACTGGCCGCCCGTGCATCCAGCCAAGCTCCTGGCGGACGGATATCGGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324331.10
CDS CCA 72 bp CCTGGGCCTCCGATATCCGTCCGCCAGGAGCTTGGCTaGATGCACGGGCGGCCAGTCCTCTTATTTCCCCGC +
Preference number: 6 (lower is better)
Translates to: PGPPISVRQELG*MHGRPVLLFPR
Trigger: GCGGGGAAATAAGAGGACTGGCCGCCCGTGCATCCAGCCAAGCTCCTGGCGGACGGATATCGGAGGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324331.10
CDS CAA 90 bp ACGTCCCTCGAATGCCTGGGCCTCCGATATCCGTCCGCCAGGAGCTaGGCTGGATGCACGGGCGGCCAGTCCTCTTATTTCCCCGCCCTC +
Preference number: 6 (lower is better)
Translates to: TSLECLGLRYPSARS*AGCTGGQSSYFPAL
Trigger: GAGGGCGGGGAAATAAGAGGACTGGCCGCCCGTGCATCCAGCCAAGCTCCTGGCGGACGGATATCGGAGGCCCAGGCATTCGAGGGACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324331.10
CDS TCA 72 bp CATCACCTCCACACCCAGACGTCGCATCCCCCGGCCTaGGGAATGCCAAGAAACCCCACCCTGCCGACCAGG +
Preference number: 6 (lower is better)
Translates to: HHLHTQTSHPPA*GMPRNPTLPTR
Trigger: CCTGGTCGGCAGGGTGGGGTTTCTTGGCATTCCTCAGGCCGGGGGATGCGACGTCTGGGTGTGGAGGTGATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602691.1
CDS GCA 72 bp TCCACACCCAGACGTCGCATCCCCCGGCCTGAGGAATaGCAAGAAACCCCACCCTGCCGACCAGGATCAGGC +
Preference number: 6 (lower is better)
Translates to: STPRRRIPRPEE*QETPPCRPGSG
Trigger: GCCTGATCCTGGTCGGCAGGGTGGGGTTTCTTGGCATTCCTCAGGCCGGGGGATGCGACGTCTGGGTGTGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602691.1
CDS CCA 72 bp CCAGCAGCTCCACCACACTGCCTGGAGCTCTTTGGGTaGCACACTCTGCTGCAGGAGGCCTCGATCCCCAGG +
Preference number: 6 (lower is better)
Translates to: PAAPPHCLELFG*HTLLQEASIPR
Trigger: CCTGGGGATCGAGGCCTCCTGCAGCAGAGTGTGCCACCCAAAGAGCTCCAGGCAGTGTGGTGGAGCTGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000648580.1
CDS CAA 72 bp CTTCAGAGATACCCGCGCACGCTGGGCGCTGCCATTTaGACAGAAAGCGGGCCTGCCCCAGAGGCCCCTACG +
Preference number: 6 (lower is better)
Translates to: LQRYPRTLGAAI*TESGPAPEAPT
Trigger: CGTAGGGGCCTCTGGGGCAGGCCCGCTTTCTGTCAAAATGGCAGCGCCCAGCGTGCGCGGGTATCTCTGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602691.1
CDS TCA 72 bp CCGCCAAGACCCCAGACGGTTCCCAAAGGCTCTCCGTaGTGCAACTGCACGTCCCTCGAATGCCTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: PPRPQTVPKGSP*CNCTSLECLGL
Trigger: GAGGCCCAGGCATTCGAGGGACGTGCAGTTGCATCACGGAGAGCCTTTGGGAACCGTCTGGGGTCTTGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324331.10
CDS GCA 72 bp CTGCCCTCCACACCCAACAGCTGGACTGCAGCCTCCTaGAAGGCCTGGTGGATGTGCCTGACCTCTCTCTGG +
Preference number: 6 (lower is better)
Translates to: LPSTPNSWTAAS*KAWWMCLTSLW
Trigger: CCAGAGAGAGGTCAGGCACATCCACCAGGCCTTGCAGGAGGCTGCAGTCCAGCTGTTGGGTGTGGAGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274680.9
ENST00000324331.10
CDS CCA 72 bp TTGCCCAGCAGCTCCACCACACTGCCTGGAGCTCTTTaGGTGGCACACTCTGCTGCAGGAGGCCTCGATCCC +
Preference number: 6 (lower is better)
Translates to: LPSSSTTLPGAL*VAHSAAGGLDP
Trigger: GGGATCGAGGCCTCCTGCAGCAGAGTGTGCCACCCAAAGAGCTCCAGGCAGTGTGGTGGAGCTGCTGGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000648580.1
CDS CCA 72 bp GCTCTCCGTGATGCAACTGCACGTCCCTCGAATGCCTaGGCCTCCGATATCCGTCCGCCAGGAGCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: ALRDATARPSNA*ASDIRPPGAWL
Trigger: CAGCCAAGCTCCTGGCGGACGGATATCGGAGGCCCAGGCATTCGAGGGACGTGCAGTTGCATCACGGAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324331.10
CDS TCA 72 bp GGACTGCAGCCTCCTGCAAGGCCTGGTGGATGTGCCTaGCCTCTCTCTGGGACAGAGTCCGTTCCATGTGGC +
Preference number: 6 (lower is better)
Translates to: GLQPPARPGGCA*PLSGTESVPCG
Trigger: GCCACATGGAACGGACTCTGTCCCAGAGAGAGGTCAGGCACATCCACCAGGCCTTGCAGGAGGCTGCAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274680.9
ENST00000324331.10
CDS GCA 72 bp ACATCACCCACCACCAGGAAGGCATCCAGTCCCGCGTaGAGCAAGTCCCACTGGTGTGCAGACGTGTGCGCT +
Preference number: 6 (lower is better)
Translates to: TSPTTRKASSPA*SKSHWCADVCA
Trigger: AGCGCACACGTCTGCACACCAGTGGGACTTGCTGCACGCGGGACTGGATGCCTTCCTGGTGGTGGGTGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000648580.1
CDS CCA 72 bp AATGCCTGGGCCTCCGATATCCGTCCGCCAGGAGCTTaGCTGGATGCACGGGCGGCCAGTCCTCTTATTTCC +
Preference number: 6 (lower is better)
Translates to: NAWASDIRPPGA*LDARAASPLIS
Trigger: GGAAATAAGAGGACTGGCCGCCCGTGCATCCAGCCAAGCTCCTGGCGGACGGATATCGGAGGCCCAGGCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324331.10
CDS CAA 72 bp GAATGCCTGGGCCTCCGATATCCGTCCGCCAGGAGCTaGGCTGGATGCACGGGCGGCCAGTCCTCTTATTTC +
Preference number: 6 (lower is better)
Translates to: ECLGLRYPSARS*AGCTGGQSSYF
Trigger: GAAATAAGAGGACTGGCCGCCCGTGCATCCAGCCAAGCTCCTGGCGGACGGATATCGGAGGCCCAGGCATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324331.10
CDS GCA 72 bp GGCATCCAGTCCCGCGTGCAGCAAGTCCCACTGGTGTaGAGACGTGTGCGCTCTCAGCATGTGAGTCCGATT +
Preference number: 6 (lower is better)
Translates to: GIQSRVQQVPLV*RRVRSQHVSPI
Trigger: AATCGGACTCACATGCTGAGAGCGCACACGTCTGCACACCAGTGGGACTTGCTGCACGCGGGACTGGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000648580.1
CDS GCA 72 bp AGCTGGACTGCAGCCTCCTGCAAGGCCTGGTGGATGTaGCTGACCTCTCTCTGGGACAGAGTCCGTTCCATG +
Preference number: 6 (lower is better)
Translates to: SWTAASCKAWWM*LTSLWDRVRSM
Trigger: CATGGAACGGACTCTGTCCCAGAGAGAGGTCAGGCACATCCACCAGGCCTTGCAGGAGGCTGCAGTCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274680.9
ENST00000324331.10
CDS CCA 72 bp ACACCCAACAGCTGGACTGCAGCCTCCTGCAAGGCCTaGTGGATGTGCCTGACCTCTCTCTGGGACAGAGTC +
Preference number: 6 (lower is better)
Translates to: TPNSWTAASCKA*WMCLTSLWDRV
Trigger: GACTCTGTCCCAGAGAGAGGTCAGGCACATCCACCAGGCCTTGCAGGAGGCTGCAGTCCAGCTGTTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274680.9
ENST00000324331.10
CDS TCA 72 bp GCAAATCCTGGAGCCCCAAGAGGGCTGCAGCCTGAGTaGAGTGGTGACATCAGAACCTGCCCTCCACACCCA +
Preference number: 6 (lower is better)
Translates to: ANPGAPRGLQPE*SGDIRTCPPHP
Trigger: TGGGTGTGGAGGGCAGGTTCTGATGTCACCACTTCACTCAGGCTGCAGCCCTCTTGGGGCTCCAGGATTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274680.9
CDS GCA 72 bp ATCCCCCGGCCTGAGGAATGCCAAGAAACCCCACCCTaGCGACCAGGATCAGGCGAAATCAAGTCACCCTTG +
Preference number: 6 (lower is better)
Translates to: IPRPEECQETPP*RPGSGEIKSPL
Trigger: CAAGGGTGACTTGATTTCGCCTGATCCTGGTCGGCAGGGTGGGGTTTCTTGGCATTCCTCAGGCCGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602691.1
CDS TCA 72 bp CTCTCTGGGACAGAGTCCGTTCCATGTGGCGGTACGTaGTGCGGTAGCAGTGGCTGGTCTTGTGCGTCTTTG +
Preference number: 6 (lower is better)
Translates to: LSGTESVPCGGT*CGSSGWSCASL
Trigger: CAAAGACGCACAAGACCAGCCACTGCTACCGCATCACGTACCGCCACATGGAACGGACTCTGTCCCAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274680.9
ENST00000324331.10
CDS TCA 72 bp CAGGTAGACATATGCATGGGCACCTCTCCTGAGAGCTaGGCCCACCATTGTAGAAACTTCTCACAGGTTCCA +
Preference number: 6 (lower is better)
Translates to: QVDICMGTSPES*AHHCRNFSQVP
Trigger: TGGAACCTGTGAGAAGTTTCTACAATGGTGGGCTCAGCTCTCAGGAGAGGTGCCCATGCATATGTCTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274680.9
ENST00000648580.1
CDS TCA 72 bp CAGGTAGACATATGCATGGGCACCTCTCCTGAGAGCTaGGCCCACCATTGTAGAAACTTCTCACAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: QVDICMGTSPES*AHHCRNFSQVP
Trigger: AGGAACCTGTGAGAAGTTTCTACAATGGTGGGCTCAGCTCTCAGGAGAGGTGCCCATGCATATGTCTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324331.10
CDS GCA 72 bp AGCTTCACGGCCTCCATGGTGTGTGTCTCTTGTTTATaGGCAGAGCGAGAACTTTGTTCAAAGAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: SFTASMVCVSCL*AERELCSKSCR
Trigger: CCTGCAGCTCTTTGAACAAAGTTCTCGCTCTGCGCATAAACAAGAGACACACACCATGGAGGCCGTGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000445533.1
ENST00000648580.1
CDS TCA 72 bp CAGGTAGACATATGCATGGGCACCTCTCCTGAGAGCTaGGCCCACCATTGTAGAAACTTCTCACAGGTTCAT +
Preference number: 6 (lower is better)
Translates to: QVDICMGTSPES*AHHCRNFSQVH
Trigger: ATGAACCTGTGAGAAGTTTCTACAATGGTGGGCTCAGCTCTCAGGAGAGGTGCCCATGCATATGTCTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602691.1
CDS CAA 90 bp CTCCAGCTCATCTCCAAAAAGATGTGCCATGAGCCTGGTAAGCGTTaGCTTAAGATCAAACTCTACAAGCTTCACGGCCTCCATGGTGTG +
Preference number: 6 (lower is better)
Translates to: LQLISKKMCHEPGKR*LKIKLYKLHGLHGV
Trigger: CACACCATGGAGGCCGTGAAGCTTGTAGAGTTTGATCTTAAGCAAACGCTTACCAGGCTCATGGCACATCTTTTTGGAGATGAGCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000445533.1
ENST00000648580.1
CDS CAA 72 bp CTCTACAAGCTTCACGGCCTCCATGGTGTGTGTCTCTaGTTTATGCGCAGAGCGAGAACTTTGTTCAAAGAG +
Preference number: 6 (lower is better)
Translates to: LYKLHGLHGVCL*FMRRARTLFKE
Trigger: CTCTTTGAACAAAGTTCTCGCTCTGCGCATAAACAAGAGACACACACCATGGAGGCCGTGAAGCTTGTAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000445533.1
ENST00000648580.1
CDS CAA 90 bp AAGATCAAACTCTACAAGCTTCACGGCCTCCATGGTGTGTGTCTCTaGTTTATGCGCAGAGCGAGAACTTTGTTCAAAGAGCTGCAGGCT +
Preference number: 6 (lower is better)
Translates to: KIKLYKLHGLHGVCL*FMRRARTLFKELQA
Trigger: AGCCTGCAGCTCTTTGAACAAAGTTCTCGCTCTGCGCATAAACAAGAGACACACACCATGGAGGCCGTGAAGCTTGTAGAGTTTGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000445533.1
ENST00000648580.1
CDS GCA 72 bp TCTCCAAAAAGATGTGCCATGAGCCTGGTAAGCGTTTaGTTAAGATCAAACTCTACAAGCTTCACGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SPKRCAMSLVSV*LRSNSTSFTAS
Trigger: GGAGGCCGTGAAGCTTGTAGAGTTTGATCTTAAGCAAACGCTTACCAGGCTCATGGCACATCTTTTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000445533.1
ENST00000648580.1
CDS CAA 72 bp CAGTGGCTGGTCTTGTGCGTCTTTGGATGTACAAACTaGTCTATGAGATCAACCTTTTCCACCAGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: QWLVLCVFGCTN*SMRSTFSTRSP
Trigger: AGGAGACCTGGTGGAAAAGGTTGATCTCATAGACAAGTTTGTACATCCAAAGACGCACAAGACCAGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274680.9
ENST00000324331.10
CDS CAA 72 bp GGTGTGTGTCTCTTGTTTATGCGCAGAGCGAGAACTTaGTTCAAAGAGCTGCAGGCTTTCTCCATCCTTTAT +
Preference number: 6 (lower is better)
Translates to: GVCLLFMRRART*FKELQAFSILY
Trigger: ATAAAGGATGGAGAAAGCCTGCAGCTCTTTGAACAAAGTTCTCGCTCTGCGCATAAACAAGAGACACACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000445533.1
ENST00000648580.1
CDS CAA 72 bp ATCTCCAAAAAGATGTGCCATGAGCCTGGTAAGCGTTaGCTTAAGATCAAACTCTACAAGCTTCACGGCCTC +
Preference number: 6 (lower is better)
Translates to: ISKKMCHEPGKR*LKIKLYKLHGL
Trigger: GAGGCCGTGAAGCTTGTAGAGTTTGATCTTAAGCAAACGCTTACCAGGCTCATGGCACATCTTTTTGGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000445533.1
ENST00000648580.1
CDS TCA 72 bp TGGTCTTGTGCGTCTTTGGATGTACAAACTTGTCTATaGGATCAACCTTTTCCACCAGGTCTCCTCCAATTG +
Preference number: 6 (lower is better)
Translates to: WSCASLDVQTCL*DQPFPPGLLQL
Trigger: CAATTGGAGGAGACCTGGTGGAAAAGGTTGATCTCATAGACAAGTTTGTACATCCAAAGACGCACAAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274680.9
ENST00000324331.10
CDS GCA 72 bp TGTTTATGCGCAGAGCGAGAACTTTGTTCAAAGAGCTaGAGGCTTTCTCCATCCTTTATACCAGCAAATAAC +
Preference number: 6 (lower is better)
Translates to: CLCAERELCSKS*RLSPSFIPANN
Trigger: GTTATTTGCTGGTATAAAGGATGGAGAAAGCCTGCAGCTCTTTGAACAAAGTTCTCGCTCTGCGCATAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000648580.1
CDS TCA 72 bp ATCATTTTCTGCGTAATTCTCAGAGGGCAACCAGAATaGAATATCATTGATCACAGCCGGATATTTGCTAAG +
Preference number: 6 (lower is better)
Translates to: IIFCVILRGQPE*NIIDHSRIFAK
Trigger: CTTAGCAAATATCCGGCTGTGATCAATGATATTTCATTCTGGTTGCCCTCTGAGAATTACGCAGAAAATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274680.9
ENST00000324331.10
ENST00000648580.1