RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FARP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000006607

Ensembl transcript IDs: ENST00000264042.8, ENST00000373287.8, ENST00000412332.1, ENST00000413432.2, ENST00000418082.1, ENST00000422951.1, ENST00000444371.1, ENST00000445489.1, ENST00000464142.5, ENST00000467260.1, ENST00000470617.1, ENST00000471447.5, ENST00000473082.5, ENST00000473510.1, ENST00000476799.1, ENST00000478489.5, ENST00000479427.5, ENST00000485051.1, ENST00000486736.5, ENST00000491425.1, ENST00000492868.1, ENST00000496470.1, ENST00000627550.2

Found 909 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGAGGCAGGGTGTGCCCAGGCTTTGGTCCGATGCCGAGAGCACTaGTCAGGCCTTGTCTGCGTCTTTGAGCCAGGGGCCTGGGAGCTG +
Preference number: 1 (lower is better)
Translates to: REAGCAQALVRCREH*SGLVCVFEPGAWEL
Trigger: CAGCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTGGGCACACCCTGCCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR CCA 90 bp CGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCCAGGGGCCTaGGAGCTGTGGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATT +
Preference number: 1 (lower is better)
Translates to: REHCSGLVCVFEPGA*ELWLERLRAQDSHI
Trigger: AATGTGCGAGTCTTGAGCGCGGAGCCGCTCAAGCCACAGCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAGGCCTGAGCAGTGCTCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR CCA 90 bp AGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATaGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGGGTACGC +
Preference number: 1 (lower is better)
Translates to: RPLGLPLGSPDGRSA*LCHACLRGSWQWVR
Trigger: GCGTACCCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR GCA 90 bp CTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTaGCACGCTTGTCTGAGAGGGTCCTGGCAGTGGGTACGCAGGGTG +
Preference number: 1 (lower is better)
Translates to: LGLPLGSPDGRSAWL*HACLRGSWQWVRRV
Trigger: CACCCTGCGTACCCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR CCA 90 bp TGCTCAGGCCTTGTCTGCGTCTTTGAGCCAGGGGCCTGGGAGCTGTaGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: CSGLVCVFEPGAWEL*LERLRAQDSHIFPR
Trigger: CCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAGCCGCTCAAGCCACAGCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAGGCCTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR CCA 90 bp CCACGCTTGTCTGAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATaGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGC +
Preference number: 1 (lower is better)
Translates to: PRLSERVLAVGTQGV*QGLFSSACSRPVLG
Trigger: GCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTCTCAGACAAGCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR CCA 90 bp GCCAGAGTCTCGCAGGATTGGGTAGAAGGTGGGACAGGCGAGGGATaGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCT +
Preference number: 1 (lower is better)
Translates to: ARVSQDWVEGGTGEG*RRGSLSRRRHCGSA
Trigger: AGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCATCCCTCGCCTGTCCCACCTTCTACCCAATCCTGCGAGACTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR CCA 90 bp AGGCGAGGGATGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTaGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGGCGG +
Preference number: 1 (lower is better)
Translates to: RRGMEEGELESSSSL*LSFMVLCRAPHLGR
Trigger: CCGCCCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCATCCCTCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR CCA 90 bp TGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCTTaGCACACCTGCCCCTGGGACCCTTCCCATTGTCCTGGGACAGAA +
Preference number: 1 (lower is better)
Translates to: WYVFTGTLDGWAGPP*HTCPWDPSHCPGTE
Trigger: TTCTGTCCCAGGACAATGGGAAGGGTCCCAGGGGCAGGTGTGCCAAGGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 90 bp TTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTaGGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCT +
Preference number: 1 (lower is better)
Translates to: LVHQMEGQHGCATLV*EGPGSGYAGCMAGP
Trigger: AGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR CCA 90 bp AGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTaGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCT +
Preference number: 1 (lower is better)
Translates to: RSAWLCHACLRGSWQ*VRRVYGRASFPVLA
Trigger: AGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR CCA 90 bp GATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTaGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTG +
Preference number: 1 (lower is better)
Translates to: DGRSAWLCHACLRGS*QWVRRVYGRASFPV
Trigger: CACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR TCA 90 bp GGTGGCCTCTCATTGACGGGGACTGCTGCAGGATTGCGTCCCCTCTaGGTAGACACACCTGGCTATGACGGTGACCCATGGGTAAGTCCT +
Preference number: 1 (lower is better)
Translates to: GGLSLTGTAAGLRPL*VDTPGYDGDPWVSP
Trigger: AGGACTTACCCATGGGTCACCGTCATAGCCAGGTGTGTCTACTCAGAGGGGACGCAATCCTGCAGCAGTCCCCGTCAATGAGAGGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CCA 90 bp AGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATaGTGTTATGCAGAGCTCCACACCTTGGGCGGTCACGTGGTGAAC +
Preference number: 1 (lower is better)
Translates to: RRGSLSRRRHCGSAS*CYAELHTLGGHVVN
Trigger: GTTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373287.8
3UTR GCA 90 bp ATTCCAGCTTCCACAGCATTAGCTTCACCAGGGAGCGGCCACCCCTaGCCCACAGCAGTGCTAGCTCAAAACCACCCAAACCTAACCTGC +
Preference number: 1 (lower is better)
Translates to: IPASTALASPGSGHP*PTAVLAQNHPNLTC
Trigger: GCAGGTTAGGTTTGGGTGGTTTTGAGCTAGCACTGCTGTGGGGCAGGGGTGGCCGCTCCCTGGTGAAGCTAATGCTGTGGAAGCTGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CCA 90 bp TGGTTTAGACTGAGAAGCTCTCCATGTGGTACCCAGCAGGGCCCATaGCACCTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGG +
Preference number: 1 (lower is better)
Translates to: WFRLRSSPCGTQQGP*HLVCVYGYAGWVGR
Trigger: CCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATGGAGAGCTTCTCAGTCTAAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR GCA 90 bp GAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATaGAGAGCTCCACACCTTGGGCGGTCACGTGGTGAACTCATGAGC +
Preference number: 1 (lower is better)
Translates to: ELESSSSLWLSFMVL*RAPHLGRSRGELMS
Trigger: GCTCATGAGTTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
3UTR GCA 90 bp TGCTGGCATCCAGCCAACACTGATGAGAAAAGGAAAACCAGCCCTTaGAAGATGCCCTCAATGGCTCAGACACCTGAGCCACGTGGTCCC +
Preference number: 1 (lower is better)
Translates to: CWHPANTDEKRKTSP*KMPSMAQTPEPRGP
Trigger: GGGACCACGTGGCTCAGGTGTCTGAGCCATTGAGGGCATCTTGCAAGGGCTGGTTTTCCTTTTCTCATCAGTGTTGGCTGGATGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CCA 90 bp CCATGGTGCCCACGCTTGCCTTCCCTTCCGTGTCTAAATCCCCTCTaGGTGGACATTACAACCCACTCACAAGAGAAAGGGGTAAGAGGG +
Preference number: 1 (lower is better)
Translates to: PWCPRLPSLPCLNPL*VDITTHSQEKGVRG
Trigger: CCCTCTTACCCCTTTCTCTTGTGAGTGGGTTGTAATGTCCACCCAGAGGGGATTTAGACACGGAAGGGAAGGCAAGCGTGGGCACCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 90 bp CTCTGTGCCACAAACATCAGCCTTGACTTTTATGGTGGTTTAGACTaGGAAGCTCTCCATGTGGTACCCAGCAGGGCCCATGGCACCTGG +
Preference number: 1 (lower is better)
Translates to: LCATNISLDFYGGLD*EALHVVPSRAHGTW
Trigger: CCAGGTGCCATGGGCCCTGCTGGGTACCACATGGAGAGCTTCTCAGTCTAAACCACCATAAAAGTCAAGGCTGATGTTTGTGGCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 90 bp TCCCAGCCGCCTGTGACAGAATCTTCCATACACATGGCTCCCAGATaGGCACCAAAGGGAGACCACAGCAGATACGATTCTGTGGACTTG +
Preference number: 1 (lower is better)
Translates to: SQPPVTESSIHMAPR*APKGDHSRYDSVDL
Trigger: CAAGTCCACAGAATCGTATCTGCTGTGGTCTCCCTTTGGTGCTCATCTGGGAGCCATGTGTATGGAAGATTCTGTCACAGGCGGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 90 bp CAACCTGACTCAGCTTCCGTCGAGGCAGGAAAAGGGCACCTAGGCTaGATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAA +
Preference number: 1 (lower is better)
Translates to: QPDSASVEAGKGHLG*MQFFKWGYLNTEQQ
Trigger: TTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGCCTAGGTGCCCTTTTCCTGCCTCGACGGAAGCTGAGTCAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR TCA 90 bp CGTCCCTGGATGGACCTACCCACTCTGTGCCACAAACATCAGCCTTaGCTTTTATGGTGGTTTAGACTGAGAAGCTCTCCATGTGGTACC +
Preference number: 1 (lower is better)
Translates to: RPWMDLPTLCHKHQP*LLWWFRLRSSPCGT
Trigger: GGTACCACATGGAGAGCTTCTCAGTCTAAACCACCATAAAAGTCAAGGCTGATGTTTGTGGCACAGAGTGGGTAGGTCCATCCAGGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 90 bp AGACCCCTGAACAGTCAATGCACGACCTGCACTGTTGTCCACATGTaGACACCTGTACCGTTGCTCCTATTGAAGAGAAATCTCACTTCC +
Preference number: 1 (lower is better)
Translates to: RPLNSQCTTCTVVHM*TPVPLLLLKRNLTS
Trigger: GGAAGTGAGATTTCTCTTCAATAGGAGCAACGGTACAGGTGTTCACATGTGGACAACAGTGCAGGTCGTGCATTGACTGTTCAGGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
3UTR TCA 90 bp CAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCCTCAGGCTaGATTGCTCCTGGAGTTTTGCTATTTAACCACTGTAAACTGTCT +
Preference number: 1 (lower is better)
Translates to: QKQSPMLLQGTMASG*IAPGVLLFNHCKLS
Trigger: AGACAGTTTACAGTGGTTAAATAGCAAAACTCCAGGAGCAATTCAGCCTGAGGCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CCA 90 bp CAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATaGCCTCAGGCTGAATTGCTCCTGGAGTTTTGCTATTTAACCACT +
Preference number: 1 (lower is better)
Translates to: QSRNKSRAQCCCRAL*PQAELLLEFCYLTT
Trigger: AGTGGTTAAATAGCAAAACTCCAGGAGCAATTCAGCCTGAGGCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 90 bp AGTGCAACTGCCTTTGGGATAAGTAGAACTTTCTCATTAACAACCTaGCTCAGCTTCCGTCGAGGCAGGAAAAGGGCACCTAGGCTGAAT +
Preference number: 1 (lower is better)
Translates to: SATAFGISRTFSLTT*LSFRRGRKRAPRLN
Trigger: ATTCAGCCTAGGTGCCCTTTTCCTGCCTCGACGGAAGCTGAGTCAGGTTGTTAATGAGAAAGTTCTACTTATCCCAAAGGCAGTTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR GCA 90 bp ACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTaGACTACCCAACACTGGCTTGAAGAAGAGCCACAAAGCACAAAG +
Preference number: 1 (lower is better)
Translates to: TSFNFRVYQATPLRL*TTQHWLEEEPQSTK
Trigger: CTTTGTGCTTTGTGGCTCTTCTTCAAGCCAGTGTTGGGTAGTGCACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CCA 90 bp CACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATaGCAGAGGAGCTTGCATGAAAAATCAGAACATACCCGTACACCA +
Preference number: 1 (lower is better)
Translates to: HSTCEVLQLLLRAVE*QRSLHEKSEHTRTP
Trigger: TGGTGTACGGGTATGTTCTGATTTTTCATGCAAGCTCCTCTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 90 bp GTAGAGGCATACTCAAGGTTTTGTGTAGCGCAGTGGCTGGACAAGTaGGACAAAACCTGTGTCCTAGTTAATTATAGGCAACAGGGCTCA +
Preference number: 1 (lower is better)
Translates to: VEAYSRFCVAQWLDK*DKTCVLVNYRQQGS
Trigger: TGAGCCCTGTTGCCTATAATTAACTAGGACACAGGTTTTGTCTCACTTGTCCAGCCACTGCGCTACACAAAACCTTGAGTATGCCTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CCA 90 bp ACAACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTaGAATGGCAGAGGAGCTTGCATGAAAAATCAGAACATACCCGTA +
Preference number: 1 (lower is better)
Translates to: TTTAHVKCYNYSSER*NGRGACMKNQNIPV
Trigger: TACGGGTATGTTCTGATTTTTCATGCAAGCTCCTCTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR GCA 90 bp AAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGAGGAGCTTaGATGAAAAATCAGAACATACCCGTACACCAAAGCAATTCAAAA +
Preference number: 1 (lower is better)
Translates to: KCYNYSSERWNGRGA*MKNQNIPVHQSNSK
Trigger: TTTTGAATTGCTTTGGTGTACGGGTATGTTCTGATTTTTCATGCAAGCTCCTCTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 90 bp ATCACAGTAAATCCATCCAGGCAAAACATCAGAGATCTTACAATGTaGACAGGAATGAAATGTAAAGTTTCCACAAGACATTCTGGGAAG +
Preference number: 1 (lower is better)
Translates to: ITVNPSRQNIRDLTM*TGMKCKVSTRHSGK
Trigger: CTTCCCAGAATGTCTTGTGGAAACTTTACATTTCATTCCTGTTCACATTGTAAGATCTCTGATGTTTTGCCTGGATGGATTTACTGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp CTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCAGAGGCCCACCCACACTaGTGGTGCCAGTGGGGATCC +
Preference number: 2 (lower is better)
Translates to: LQGRPLGLPLGSPDGRSAEAHPH*WCQWGS
Trigger: GGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTC...TGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR-3UTR GCA 90 bp GAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCCCTCGGCAGGGACCCTaGTCTGGGGAGAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: EGPGSGYAGCMAGPLFQCPRQGP*SGERGR
Trigger: CCTGCCTCTCTCCCCAGAGCAGGGTCCCTGCCGAGG...GCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR-3UTR TCA 90 bp GGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTCCAGTGGGGATCCAGTaGGACCACAGCCACTTCCCA +
Preference number: 2 (lower is better)
Translates to: GQAPGAATWFTRWKVSMAPVGIQ*DHSHFP
Trigger: TGGGAAGTGGCTGTGGTCTCACTGGATCCCCACTGG...AGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR-3UTR TCA 90 bp GCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTCCTTGTCTGCGTCTTTaGGCCAGGGGCCTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: AGPWGCHLVHQMEGQHGCPCLRL*ARGLGA
Trigger: AGCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAGG...ACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR-3UTR CCA 90 bp GCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCCACCCACACTGCTaGTGCCAGTGGGGATCCAGT +
Preference number: 2 (lower is better)
Translates to: AGPWGCHLVHQMEGQHGCAHPHC*CQWGSS
Trigger: ACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGC...ACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR CAA 90 bp CTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCTaGGCACACCTGCCCCTGGGACCCTTCCCATTGTCCTGGGACAGA +
Preference number: 2 (lower is better)
Translates to: LVCVYGYAGWVGRAT*AHLPLGPFPLSWDR
Trigger: TCTGTCCCAGGACAATGGGAAGGGTCCCAGGGGCAGGTGTGCCAAGGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp CTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGCTCTGGGGCGATGCCGAGAGCACTaGTCAGGCCTTGTCTGCGTC +
Preference number: 2 (lower is better)
Translates to: LFSSACSRPVLGRDPALGRCREH*SGLVCV
Trigger: GACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCG...CCCCAGAGCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR-3UTR CCA 90 bp CTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGCTCTGGGGGGTGTGCCCAGGCTTTaGTCCGATGCCGAGAGCACT +
Preference number: 2 (lower is better)
Translates to: LFSSACSRPVLGRDPALGGVPRL*SDAEST
Trigger: AGTGCTCTCGGCATCGGACCAAAGCCTGGGCACACC...CCCCAGAGCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR-3UTR CCA 90 bp GCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTAGAGGGTCCTGGCAGTaGGTACGCAGGGTGTATGGC +
Preference number: 2 (lower is better)
Translates to: AGPWGCHLVHQMEGQHGCRGSWQ*VRRVYG
Trigger: GCCATACACCCTGCGTACCCACTGCCAGGACCCTCT...ACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR-3UTR CCA 90 bp GCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTCACTGCTGGTGCCAGTaGGGATCCAGTGAGACCACA +
Preference number: 2 (lower is better)
Translates to: AGPWGCHLVHQMEGQHGCHCWCQ*GSSETT
Trigger: TGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTG...ACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR CAA 90 bp GCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTaGTCTGAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAG +
Preference number: 2 (lower is better)
Translates to: ATWFTRWKVSMAVPR*SERVLAVGTQGVWQ
Trigger: CTGCCATACACCCTGCGTACCCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR-3UTR GCA 90 bp GCCCAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTAGGGCCCCAGATAGCTaGTGGCATGCACTAGGTCCT +
Preference number: 2 (lower is better)
Translates to: AQALVRCREHCSGLVCVFRAPDS*WHALGP
Trigger: AGGACCTAGTGCATGCCAGCAGCTATCTGGGGCCCT...AAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR-3UTR TCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCCATCTAGGGCTGGCCTaGGACCGGCACTTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSHLGLA*DRHLWV
Trigger: CACCCACAAGTGCCGGTCTCAGGCCAGCCCTAGATG...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp ATGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTCTCACTTCCCCCAGTaGTGCCCCTGCCTATCCAAA +
Preference number: 2 (lower is better)
Translates to: MEEGELESSSSLWLSFMVSHFPQ*CPCLSK
Trigger: TTTGGATAGGCAGGGGCAGCACTGGGGGAAGTGAGA...CACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373287.8
3UTR-3UTR CCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCTGTTTACGGGTACGCTaGATGGGTGGGCAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSCLRVR*MGGQGH
Trigger: GTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACA...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCGCAGTGGTTTCCCCATaGCGTCCCTGGATGGACCTA +
Preference number: 2 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSAVVSP*RPWMDL
Trigger: TAGGTCCATCCAGGGACGTCATGGGGAAACCACTGC...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCGGCACTTGTGGGTGCTaGGCTGCATGGCAGTGGTTT +
Preference number: 2 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSGTCGC*AAWQWF
Trigger: AAACCACTGCCATGCAGCTCAGCACCCACAAGTGCC...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGGCTGGGGTAGGGGCATaGTCCCACTCCTTAGGAAGG +
Preference number: 2 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVAGVGA*SHSLGR
Trigger: CCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGC...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp GTGTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCACACCCACACTGCTGGTaGCAGTGGGGATCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: VCEQSSRPSTSRWKECWAHPHCW*QWGSSE
Trigger: CTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTG...TGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR-3UTR TCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGCTGGTGGCCTCTCATTaGCGGGGACTGCTGCAGGAT +
Preference number: 2 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQLVASH*RGLLQD
Trigger: ATCCTGCAGCAGTCCCCGTCAATGAGAGGCCACCAG...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGTTGTGGGTGCTGAGCTaGATGGCAGTGGTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVLWVLS*MAVVSP
Trigger: TGGGGAAACCACTGCCATGCAGCTCAGCACCCACAA...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGACCCAGCAGGGCCCATaGCACCTGGTATGTGTTTAC +
Preference number: 2 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVTQQGP*HLVCVY
Trigger: GTAAACACATACCAGGTGCCATGGGCCCTGCTGGGT...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGCACCATACTCCAGCCTaGGTGACAGGAGTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQHHTPA*VTGVRP
Trigger: GGGCCTCACTCCTGTCACCCAGGCTGGAGTATGGTG...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp CTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATAGTCCCTTGGGAAGGAGGAGGGGGAGCTTaGGTCGTCGTCGTCACTGTG +
Preference number: 2 (lower is better)
Translates to: LQVGLSQHRTAKPIVPWEGGGGA*VVVVTV
Trigger: CACAGTGACGACGACGACTCAAGCTCCCCCTCCTCC...TTCCCAAGGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR-3UTR TCA 90 bp TCAACACAGAACAGCAAAACCTATAGTCCCTTGGGAACTCTAGGTGTGAGGAGTGGAGGAGGGGGAGCTTaGGTCGTCGTCGTCACTGTG +
Preference number: 2 (lower is better)
Translates to: STQNSKTYSPLGTLGVRSGGGGA*VVVVTV
Trigger: CACAGTGACGACGACGACTCAAGCTCCCCCTCCTCC...ACTCCTCACACCTAGAGTTCCCAAGGGACTATAGGTTTTGCTGTTCTGTGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR-3UTR TCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGAGAGTCCCACGAGTTTaGCCACAGCACACAGGAGGC +
Preference number: 2 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQRVPRV*PQHTGG
Trigger: GCCTCCTGTGTGCTGTGGTCAAACTCGTGGGACTCT...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp CTCAGCTTCCGTCGAGGCAGGAAAAGGGCACCTAGGCTGAATGCAGTTCTTCAATCTAGGTGTGAGGAGTaGCCAGAGTCTCGCAGGATT +
Preference number: 2 (lower is better)
Translates to: LSFRRGRKRAPRLNAVLQSRCEE*PESRRI
Trigger: AATCCTGCGAGACTCTGGCCACTCCTCACACCTAGA...TTGAAGAACTGCATTCAGCCTAGGTGCCCTTTTCCTGCCTCGACGGAAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR-3UTR CCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCGGAGGCCATGGCCTATaGCCATCTTTCCCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGGGHGL*PSFPGL
Trigger: TAACCCTGGGAAAGATGGCCATAGGCCATGGCCTCC...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGCATGACGTCCCTGGATaGACCTACCCACTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQHDVPG*TYPLCA
Trigger: GGCACAGAGTGGGTAGGTCCATCCAGGGACGTCATG...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGGGCTGCAGTGAGATGTaGCTGTGCCACCATACTCCA +
Preference number: 2 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQGCSEM*LCHHTP
Trigger: TGGAGTATGGTGGCACAGTCACATCTCACTGCAGCC...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp CTCAGCTTCCGTCGAGGCAGGAAAAGGGCACCTAGGCTGAATGCAGTTCTTCAAAGCTTCATGGTGTTATaGAGAGCTCCACACCTTGGG +
Preference number: 2 (lower is better)
Translates to: LSFRRGRKRAPRLNAVLQSFMVL*RAPHLG
Trigger: CCCAAGGTGTGGAGCTCTGCATAACACCATGAAGCT...TTGAAGAACTGCATTCAGCCTAGGTGCCCTTTTCCTGCCTCGACGGAAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR CAA 90 bp TCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATAGTCCCTaGGGAACTCTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGATTG +
Preference number: 2 (lower is better)
Translates to: SSGAISTQNSKTYSP*GTLGVRSGQSLAGL
Trigger: CAATCCTGCGAGACTCTGGCCACTCCTCACACCTAGAGTTCCCAAGGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR-3UTR TCA 90 bp GAGGGAGGGAGAACTGTTCCAGGCACGTTAAGCAAGAGTGAGACCCCTGAACAGTACCGTTGCTCCTATTaGAGAGAAATCTCACTTCCC +
Preference number: 2 (lower is better)
Translates to: EGGRTVPGTLSKSETPEQYRCSY*REISLP
Trigger: GGGAAGTGAGATTTCTCTTCAATAGGAGCAACGGTA...CTGTTCAGGGGTCTCACTCTTGCTTAACGTGCCTGGAACAGTTCTCCCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
3UTR-3UTR TCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGCCTCCACACTCTCAGTaGGCTGTATCCAGACACTTC +
Preference number: 2 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQPPHSQ*AVSRHF
Trigger: GAAGTGTCTGGATACAGCTCACTGAGAGTGTGGAGG...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGAGAGCCCAATGCTGCTaGAGGGCACTATGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVRAQCC*RALWPQ
Trigger: CTGAGGCCATAGTGCCCTGCAGCAGCATTGGGCTCT...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGACACCTCTCAGGCTGTaGACTACCCAACACTGGCTT +
Preference number: 2 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQTPLRL*TTQHWL
Trigger: AAGCCAGTGTTGGGTAGTGCACAGCCTGAGAGGTGT...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGCCACAAAACCCCTGCTaGCATCCAGCCAACACTGAT +
Preference number: 2 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQPQNPC*HPANTD
Trigger: ATCAGTGTTGGCTGGATGCCAGCAGGGGTTTTGTGG...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCATACGGGTACGCTGGATaGGTGGGCAGGGCCACCTTG +
Preference number: 2 (lower is better)
Translates to: SQICILLSISGFIRPHLSYGYAG*VGRATL
Trigger: CAAGGTGGCCCTGCCCACCCATCCAGCGTACCCGTA...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCAGGGCCCATGGCACCTaGTATGTGTTTACGGGTACG +
Preference number: 2 (lower is better)
Translates to: THNSWEHTCYVCHHVITTRAHGT*YVFTGT
Trigger: CGTACCCGTAAACACATACCAGGTGCCATGGGCCCT...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CAA 90 bp AGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCCTCAGGCTGAATaGCTCCTGGAGTTTTGCTATTTAACCACTGTAAACTGTCTTGTT +
Preference number: 2 (lower is better)
Translates to: SRAQCCCRALWPQAE*LLEFCYLTTVNCLV
Trigger: AACAAGACAGTTTACAGTGGTTAAATAGCAAAACTCCAGGAGCAATTCAGCCTGAGGCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCGCACCAGTTCTTACTTaGATCAAAGCATATGGCAAA +
Preference number: 2 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSAPVLT*IKAYGK
Trigger: TTTGCCATATGCTTTGATTCAAGTAAGAACTGGTGC...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAAATGGCTCAGACACCTaGGCCACGTGGTCCCTGTGC +
Preference number: 2 (lower is better)
Translates to: SQICILLSISGFIRPHLSNGSDT*ATWSLC
Trigger: GCACAGGGACCACGTGGCTCAGGTGTCTGAGCCATT...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp TCAACACAGAACAGCAAAACCTATAGTCCCTTGGGAACTCTAGGTGTGAGGAGTCCCCTGAACAGTCAATaGACGACCTGCACTGTTGTC +
Preference number: 2 (lower is better)
Translates to: STQNSKTYSPLGTLGVRSPLNSQ*TTCTVV
Trigger: GACAACAGTGCAGGTCGTGCATTGACTGTTCAGGGG...ACTCCTCACACCTAGAGTTCCCAAGGGACTATAGGTTTTGCTGTTCTGTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
3UTR-3UTR CCA 90 bp CAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACACTTGGTTCACCAGATaGAAGGTCAGCATGGCTGTG +
Preference number: 2 (lower is better)
Translates to: QSPIYFPLEGMLGSNKLDTWFTR*KVSMAV
Trigger: CACAGCCATGCTGACCTTCCATCTGGTGAACCAAGT...GTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR-3UTR CCA 90 bp CTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATAGTCCCTTGGGAATCTAGGTGTGAGGAGTaGCCAGAGTCTCGCAGGATT +
Preference number: 2 (lower is better)
Translates to: LQVGLSQHRTAKPIVPWESRCEE*PESRRI
Trigger: AATCCTGCGAGACTCTGGCCACTCCTCACACCTAGA...TTCCCAAGGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR-3UTR GCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCACCAGCCCTTGCAAGATaGCCTCAATGGCTCAGACAC +
Preference number: 2 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASPALAR*PQWLRH
Trigger: GTGTCTGAGCCATTGAGGGCATCTTGCAAGGGCTGG...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCACACCCAAACCTAACCTaGTGTCCAGACGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: SQICILLSISGFIRPHLSHPNLT*CPDARV
Trigger: CACCCTGGCGTCTGGACAGCAGGTTAGGTTTGGGTG...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTGCACACAGGAGGCCATaGCCTATGGCCATCTTTCCC +
Preference number: 2 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSAHRRP*PMAIFP
Trigger: GGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGC...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTTGGTGCCTTTGGCACTaGGACAGTTCCAGGCATCCC +
Preference number: 2 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSWCLWH*DSSRHP
Trigger: GGGATGCCTGGAACTGTCCCAGTGCCAAAGGCACCA...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCCACAAACATCAGCCTTaGCTTTTATGGTGGTTTAGA +
Preference number: 2 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGHKHQP*LLWWFR
Trigger: TCTAAACCACCATAAAAGTCAAGGCTGATGTTTGTG...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCACAAACAGTCCTGTCCTaGCCTCAGGTTCACTGCTGC +
Preference number: 2 (lower is better)
Translates to: SQICILLSISGFIRPHLSQTVLS*PQVHCC
Trigger: GCAGCAGTGAACCTGAGGTCAGGACAGGACTGTTTG...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTAGGTTGAGGCTGCAGTaGGATGTGACTGTGCCACCA +
Preference number: 2 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSRLRLQ*DVTVPP
Trigger: TGGTGGCACAGTCACATCTCACTGCAGCCTCAACCT...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp GCTGAATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATTCGTCGTCGTCACTGTaGCTCAGCTTCATGGTGTTA +
Preference number: 2 (lower is better)
Translates to: AECSSSSGAISTQNSKTYSSSSL*LSFMVL
Trigger: TAACACCATGAAGCTGAGCCACAGTGACGACGACGA...ATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR-3UTR CCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTCCCCCAGAGTCCCAGTaGGACTCTTTCTCCACTTGT +
Preference number: 2 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSPPESQ*DSFSTC
Trigger: ACAAGTGGAGAAAGAGTCCCACTGGGACTCTGGGGG...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGGAAAGCTGTGCCCAATaGCCCCTAAAGCATCAAGAA +
Preference number: 2 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVESCAQ*PLKHQE
Trigger: TTCTTGATGCTTTAGGGGCCATTGGGCACAGCTTTC...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCACAGTGGCTGGACAAGTaGGACAAAACCTGTGTCCTA +
Preference number: 2 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASQWLDK*DKTCVL
Trigger: TAGGACACAGGTTTTGTCTCACTTGTCCAGCCACTG...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGTCAAACTTACATAAGTaGATTTTAAACCAACGCCTC +
Preference number: 2 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVSNLHK*ILNQRL
Trigger: GAGGCGTTGGTTTAAAATGCACTTATGTAAGTTTGA...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCAGCCACGTGGTCCCTGTaGAATCACAGTAAATCCATC +
Preference number: 2 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASATWSL*NHSKSI
Trigger: GATGGATTTACTGTGATTGCACAGGGACCACGTGGC...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGTGATGAGATACCTCTaGTGGGGTAGGGGCATGATC +
Preference number: 2 (lower is better)
Translates to: SQICILLSISGFIRPHLSVMRYL*WGRGMI
Trigger: GATCATGCCCCTACCCCAGCAGAGGTATCTCATCAC...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTCTAAACCACACAGCGTaGGTGAGTGGGTTGCCTTGT +
Preference number: 2 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSLNHTA*VSGLPC
Trigger: ACAAGGCAACCCACTCACCCACGCTGTGTGGTTTAG...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTATGAGATACCTCTGCTaGGGTAGGGGCATGATCCCA +
Preference number: 2 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSMRYLC*GRGMIP
Trigger: TGGGATCATGCCCCTACCCCAGCAGAGGTATCTCAT...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGTTACCAGGGACAGAATaGATAACAACTATACAGACT +
Preference number: 2 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQLPGTE*ITTIQT
Trigger: AGTCTGTATAGTTGTTATTCATTCTGTCCCTGGTAA...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAAGGAAAACCAGCCCTTaGAAGATGCCCTCAATGGCT +
Preference number: 2 (lower is better)
Translates to: SQICILLSISGFIRPHLSRKTSP*KMPSMA
Trigger: AGCCATTGAGGGCATCTTGCAAGGGCTGGTTTTCCT...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTGGAAACTGCCTGATGTaGTTAGCCACAAAACCCCTG +
Preference number: 2 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSGNCLM*LATKPL
Trigger: CAGGGGTTTTGTGGCTAACCACATCAGGCAGTTTCC...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCAGTCCAGACGCCAGGGTaGGTTCCCTTAAAAACAAAA +
Preference number: 2 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASVQTPG*VPLKTK
Trigger: TTTTGTTTTTAAGGGAACCCACCCTGGCGTCTGGAC...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGAAGCATGGTCAAGTGTaGGTAACACTGAATTTGAGG +
Preference number: 2 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVKHGQV*VTLNLR
Trigger: CCTCAAATTCAGTGTTACCCACACTTGACCATGCTT...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCACAACAGGGCTCATCTTaGAAAGCAGCATCAATAGTG +
Preference number: 2 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASQQGSS*KAASIV
Trigger: CACTATTGATGCTGCTTTTCAAGATGAGCCCTGTTG...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CCA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCTCAATAATGAGGCAGTaGCCCTTTGACACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: THNSWEHTCYVCHHVITTSIMRQ*PFDTFK
Trigger: TTTAAAGGTGTCAAAGGGCCACTGCCTCATTATTGA...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGCCATCAGCTACCATATaGATACTAAGGTTTAGGAAA +
Preference number: 2 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVPSATI*ILRFRK
Trigger: TTTCCTAAACCTTAGTATTCATATGGTAGCTGATGG...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR TCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTTTAGAATCTCGCACATaGGCGAGTGATGAGATACCT +
Preference number: 2 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSLESRT*ASDEIP
Trigger: AGGTATCTCATCACTCGCTCATGTGCGAGATTCTAA...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAACAAAAATGGGAAACTaGCTGATGTGGTTAGCCACA +
Preference number: 2 (lower is better)
Translates to: SQICILLSISGFIRPHLSTKMGN*LMWLAT
Trigger: TGTGGCTAACCACATCAGGCAGTTTCCCATTTTTGT...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGACTGAAACTTCTAGCTaGATAAGCAAAATGATGAGA +
Preference number: 2 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVTETSS*ISKMMR
Trigger: TCTCATCATTTTGCTTATGCAGCTAGAAGTTTCAGT...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR GCA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCATTGCTCCTGGAGTTTTaGTATTTAACCACTGTAAAC +
Preference number: 2 (lower is better)
Translates to: SQICILLSISGFIRPHLSLLLEF*YLTTVN
Trigger: GTTTACAGTGGTTAAATAGCAAAACTCCAGGAGCAA...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR GCA 72 bp CTCCTGGGAGCTACCAGTGCAGCCCCTGATGCGCCCTaGCTGAGACTGCGGGCGGAGGATGACAACTGTGCG +
Preference number: 3 (lower is better)
Translates to: LLGATSAAPDAP*LRLRAEDDNCA
Trigger: CGCACAGTTGTCATCCTCCGCCCGCAGTCTCAGGCAGGGCGCATCAGGGGCTGCACTGGTAGCTCCCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp CTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGCTCTGGGGCCTGGGAGCTGTGGCTaGAGCGGCTCCGCGCTCAAG +
Preference number: 3 (lower is better)
Translates to: LFSSACSRPVLGRDPALGPGSCG*SGSALK
Trigger: CTTGAGCGCGGAGCCGCTCAAGCCACAGCTCCCAGG...CCCCAGAGCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR GCA 72 bp GGGTGTGCCCAGGCTTTGGTCCGATGCCGAGAGCACTaGTCAGGCCTTGTCTGCGTCTTTGAGCCAGGGGCC +
Preference number: 3 (lower is better)
Translates to: GCAQALVRCREH*SGLVCVFEPGA
Trigger: GGCCCCTGGCTCAAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTGGGCACACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR GCA 72 bp ACGCTGGATGGGTGGGCAGGGCCACCTTGGCACACCTaGCCCTGGGACCCTTCCCATTGTCCTGGGACAGAA +
Preference number: 3 (lower is better)
Translates to: TLDGWAGPPWHT*PWDPSHCPGTE
Trigger: TTCTGTCCCAGGACAATGGGAAGGGTCCCAGGGGCAGGTGTGCCAAGGTGGCCCTGCCCACCCATCCAGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CCA 72 bp TGCTCAGGCCTTGTCTGCGTCTTTGAGCCAGGGGCCTaGGAGCTGTGGCTTGAGCGGCTCCGCGCTCAAGAC +
Preference number: 3 (lower is better)
Translates to: CSGLVCVFEPGA*ELWLERLRAQD
Trigger: GTCTTGAGCGCGGAGCCGCTCAAGCCACAGCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAGGCCTGAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR CCA 72 bp GGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATaGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAG +
Preference number: 3 (lower is better)
Translates to: GQAPGAATWFTR*KVSMAVPRLSE
Trigger: CTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR GCA 72 bp AGCCCCTCCCAGATGTTACATGAGGCCCACCCACACTaGTGGTGCCAGTGGGGATCCAGTGAGACCACAGCC +
Preference number: 3 (lower is better)
Translates to: SPSQMLHEAHPH*WCQWGSSETTA
Trigger: GGCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR CCA 72 bp CTTGTCTGCGTCTTTGAGCCAGGGGCCTGGGAGCTGTaGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATT +
Preference number: 3 (lower is better)
Translates to: LVCVFEPGAWEL*LERLRAQDSHI
Trigger: AATGTGCGAGTCTTGAGCGCGGAGCCGCTCAAGCCACAGCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR CCA 72 bp TCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTaGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCT +
Preference number: 3 (lower is better)
Translates to: SAWLCHACLRGS*QWVRRVYGRAS
Trigger: AGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR GCA 72 bp GGCACTGTCTGCTGGTGGCCTCTCATTGACGGGGACTaGTGCAGGATTGCGTCCCCTCTGAGTAGACACACC +
Preference number: 3 (lower is better)
Translates to: GTVCWWPLIDGD*CRIASPLSRHT
Trigger: GGTGTGTCTACTCAGAGGGGACGCAATCCTGCAGCAGTCCCCGTCAATGAGAGGCCACCAGCAGACAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CCA 72 bp CCCTCCCAGATGTTACATGAGGCCCACCCACACTGCTaGTGCCAGTGGGGATCCAGTGAGACCACAGCCACT +
Preference number: 3 (lower is better)
Translates to: PSQMLHEAHPHC*CQWGSSETTAT
Trigger: AGTGGCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR CCA 72 bp TGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTaGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCA +
Preference number: 3 (lower is better)
Translates to: WLCHACLRGSWQ*VRRVYGRASFP
Trigger: TGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR CCA 72 bp TCGCAGGATTGGGTAGAAGGTGGGACAGGCGAGGGATaGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGT +
Preference number: 3 (lower is better)
Translates to: SQDWVEGGTGEG*RRGSLSRRRHC
Trigger: ACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCATCCCTCGCCTGTCCCACCTTCTACCCAATCCTGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR CCA 72 bp GCTCTCCATGTGGTACCCAGCAGGGCCCATGGCACCTaGTATGTGTTTACGGGTACGCTGGATGGGTGGGCA +
Preference number: 3 (lower is better)
Translates to: ALHVVPSRAHGT*YVFTGTLDGWA
Trigger: TGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATGGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 72 bp CAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTaGGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATG +
Preference number: 3 (lower is better)
Translates to: QMEGQHGCATLV*EGPGSGYAGCM
Trigger: CATACACCCTGCGTACCCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR GCA 72 bp TCCACAGCATTAGCTTCACCAGGGAGCGGCCACCCCTaGCCCACAGCAGTGCTAGCTCAAAACCACCCAAAC +
Preference number: 3 (lower is better)
Translates to: STALASPGSGHP*PTAVLAQNHPN
Trigger: GTTTGGGTGGTTTTGAGCTAGCACTGCTGTGGGGCAGGGGTGGCCGCTCCCTGGTGAAGCTAATGCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR GCA 72 bp ACTGTCTGCTGGTGGCCTCTCATTGACGGGGACTGCTaGAGGATTGCGTCCCCTCTGAGTAGACACACCTGG +
Preference number: 3 (lower is better)
Translates to: TVCWWPLIDGDC*RIASPLSRHTW
Trigger: CCAGGTGTGTCTACTCAGAGGGGACGCAATCCTGCAGCAGTCCCCGTCAATGAGAGGCCACCAGCAGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CCA 72 bp GTGGACTTCATGGGTCCAACAGGCACTGTCTGCTGGTaGCCTCTCATTGACGGGGACTGCTGCAGGATTGCG +
Preference number: 3 (lower is better)
Translates to: VDFMGPTGTVCW*PLIDGDCCRIA
Trigger: CGCAATCCTGCAGCAGTCCCCGTCAATGAGAGGCCACCAGCAGACAGTGCCTGTTGGACCCATGAAGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp CAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGGCCACTTCCCATCTGTaGAGAAGCCTCAGGACAGAG +
Preference number: 3 (lower is better)
Translates to: QALVRCREHCSGLVCVFEATSHL*RSLRTE
Trigger: CTCTGTCCTGAGGCTTCTCAACAGATGGGAAGTGGC...CTCAAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
3UTR TCA 72 bp GTTATGCAGAGCTCCACACCTTGGGCGGTCACGTGGTaGACTCATGAGCAGCCTGAGAGGGAGGGAGAACTG +
Preference number: 3 (lower is better)
Translates to: VMQSSTPWAVTW*THEQPEREGEL
Trigger: CAGTTCTCCCTCCCTCTCAGGCTGCTCATGAGTTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGCATAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
3UTR GCA 72 bp CCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTaGCACGCTTGTCTGAGAGGGTCCTGGCAGTGGGTA +
Preference number: 3 (lower is better)
Translates to: PLGSPDGRSAWL*HACLRGSWQWV
Trigger: TACCCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR GCA 72 bp TTAGTGGTGGACTTCATGGGTCCAACAGGCACTGTCTaGTGGTGGCCTCTCATTGACGGGGACTGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: LVVDFMGPTGTV*WWPLIDGDCCR
Trigger: CCTGCAGCAGTCCCCGTCAATGAGAGGCCACCAGCAGACAGTGCCTGTTGGACCCATGAAGTCCACCACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CCA 72 bp GTGGTGGACTTCATGGGTCCAACAGGCACTGTCTGCTaGTGGCCTCTCATTGACGGGGACTGCTGCAGGATT +
Preference number: 3 (lower is better)
Translates to: VVDFMGPTGTVC*WPLIDGDCCRI
Trigger: AATCCTGCAGCAGTCCCCGTCAATGAGAGGCCACCAGCAGACAGTGCCTGTTGGACCCATGAAGTCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCGCGTGGGTGAGTGGGTaGCCTTGTAAAGGAACCCAG +
Preference number: 3 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSAWVSG*PCKGTQ
Trigger: CTGGGTTCCTTTACAAGGCAACCCACTCACCCACGC...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR GCA 72 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATaGAGAGCTCCACACCTTGGGCGGTCACGTGGTGAA +
Preference number: 3 (lower is better)
Translates to: SSSSLWLSFMVL*RAPHLGRSRGE
Trigger: TTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
3UTR CCA 72 bp ATGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTaGCTCAGCTTCATGGTGTTATGCAGAGCTCCACAC +
Preference number: 3 (lower is better)
Translates to: MEEGELESSSSL*LSFMVLCRAPH
Trigger: GTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
3UTR CCA 72 bp GCTGCATGGCAGTGGTTTCCCCATGACGTCCCTGGATaGACCTACCCACTCTGTGCCACAAACATCAGCCTT +
Preference number: 3 (lower is better)
Translates to: AAWQWFPHDVPG*TYPLCATNISL
Trigger: AAGGCTGATGTTTGTGGCACAGAGTGGGTAGGTCCATCCAGGGACGTCATGGGGAAACCACTGCCATGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCGGCATACTCAAGGTTTaGTGTAGCGCAGTGGCTGGA +
Preference number: 3 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSGILKV*CSAVAG
Trigger: TCCAGCCACTGCGCTACACAAAACCTTGAGTATGCC...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCCTGGGACCCTTCCCATaGTCCTGGGACAGAATGATG +
Preference number: 3 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGLGPFP*SWDRMM
Trigger: CATCATTCTGTCCCAGGACAATGGGAAGGGTCCCAG...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCGCTGGTGGCCTCTCATaGACGGGGACTGCTGCAGGA +
Preference number: 3 (lower is better)
Translates to: THNSWEHTCYVCHHVITTAGGLS*TGTAAG
Trigger: TCCTGCAGCAGTCCCCGTCAATGAGAGGCCACCAGC...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 72 bp TCAGCTTCCGTCGAGGCAGGAAAAGGGCACCTAGGCTaGATGCAGTTCTTCAAGTGGGGCTATCTCAACACA +
Preference number: 3 (lower is better)
Translates to: SASVEAGKGHLG*MQFFKWGYLNT
Trigger: TGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGCCTAGGTGCCCTTTTCCTGCCTCGACGGAAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR GCA 72 bp CCAGCCAACACTGATGAGAAAAGGAAAACCAGCCCTTaGAAGATGCCCTCAATGGCTCAGACACCTGAGCCA +
Preference number: 3 (lower is better)
Translates to: PANTDEKRKTSP*KMPSMAQTPEP
Trigger: TGGCTCAGGTGTCTGAGCCATTGAGGGCATCTTGCAAGGGCTGGTTTTCCTTTTCTCATCAGTGTTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR GCA 72 bp ACAGCAGTGCTAGCTCAAAACCACCCAAACCTAACCTaGTGTCCAGACGCCAGGGTGGGTTCCCTTAAAAAC +
Preference number: 3 (lower is better)
Translates to: TAVLAQNHPNLT*CPDARVGSLKN
Trigger: GTTTTTAAGGGAACCCACCCTGGCGTCTGGACAGCAGGTTAGGTTTGGGTGGTTTTGAGCTAGCACTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CCA 72 bp AATCTCGCACATGAGCGAGTGATGAGATACCTCTGCTaGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: NLAHERVMRYLC*GRGMIPLLRKE
Trigger: TTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTATCTCATCACTCGCTCATGTGCGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 72 bp AGCCCAATGCTGCTGCAGGGCACTATGGCCTCAGGCTaGATTGCTCCTGGAGTTTTGCTATTTAACCACTGT +
Preference number: 3 (lower is better)
Translates to: SPMLLQGTMASG*IAPGVLLFNHC
Trigger: ACAGTGGTTAAATAGCAAAACTCCAGGAGCAATTCAGCCTGAGGCCATAGTGCCCTGCAGCAGCATTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR GCA 72 bp AAAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTaGTGCAGGGCACTATGGCCTCAGGCTGAATTGCTC +
Preference number: 3 (lower is better)
Translates to: KAQSRNKSRAQC*CRALWPQAELL
Trigger: GAGCAATTCAGCCTGAGGCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CCA 72 bp AACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATaGCCTCAGGCTGAATTGCTCCTGGAGTTTTGCTAT +
Preference number: 3 (lower is better)
Translates to: NKSRAQCCCRAL*PQAELLLEFCY
Trigger: ATAGCAAAACTCCAGGAGCAATTCAGCCTGAGGCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGCTACCCAACACTGGCTaGAAGAAGAGCCACAAAGCA +
Preference number: 3 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQLPNTG*KKSHKA
Trigger: TGCTTTGTGGCTCTTCTTCAAGCCAGTGTTGGGTAG...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 72 bp CCTGTGACAGAATCTTCCATACACATGGCTCCCAGATaGGCACCAAAGGGAGACCACAGCAGATACGATTCT +
Preference number: 3 (lower is better)
Translates to: PVTESSIHMAPR*APKGDHSRYDS
Trigger: AGAATCGTATCTGCTGTGGTCTCCCTTTGGTGCTCATCTGGGAGCCATGTGTATGGAAGATTCTGTCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 72 bp AACGCAATTGTTTTCATGCTAAAGATGGCGCTTCCTTaGACTAGGGGACACGTCAGGCATGGACCACCACGT +
Preference number: 3 (lower is better)
Translates to: NAIVFMLKMALP*TRGHVRHGPPR
Trigger: ACGTGGTGGTCCATGCCTGACGTGTCCCCTAGTTCAAGGAAGCGCCATCTTTAGCATGAAAACAATTGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR GCA 72 bp AATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTaGACTACCCAACACTGGCTTGAAGAAGAGCCACAA +
Preference number: 3 (lower is better)
Translates to: NFRVYQATPLRL*TTQHWLEEEPQ
Trigger: TTGTGGCTCTTCTTCAAGCCAGTGTTGGGTAGTGCACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCACCATGGTGCCCACGCTaGCCTTCCCTTCCGTGTCTA +
Preference number: 3 (lower is better)
Translates to: SQICILLSISGFIRPHLSPWCPR*PSLPCL
Trigger: TAGACACGGAAGGGAAGGCAAGCGTGGGCACCATGG...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 72 bp GCCTTTGGGATAAGTAGAACTTTCTCATTAACAACCTaGCTCAGCTTCCGTCGAGGCAGGAAAAGGGCACCT +
Preference number: 3 (lower is better)
Translates to: AFGISRTFSLTT*LSFRRGRKRAP
Trigger: AGGTGCCCTTTTCCTGCCTCGACGGAAGCTGAGTCAGGTTGTTAATGAGAAAGTTCTACTTATCCCAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
3UTR TCA 72 bp ACAAACATCAGCCTTGACTTTTATGGTGGTTTAGACTaGGAAGCTCTCCATGTGGTACCCAGCAGGGCCCAT +
Preference number: 3 (lower is better)
Translates to: TNISLDFYGGLD*EALHVVPSRAH
Trigger: ATGGGCCCTGCTGGGTACCACATGGAGAGCTTCTCAGTCTAAACCACCATAAAAGTCAAGGCTGATGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCACAGAGTCCCACGAGTTaGACCACAGCACACAGGAGG +
Preference number: 3 (lower is better)
Translates to: SQICILLSISGFIRPHLSQSPTS*TTAHRR
Trigger: CCTCCTGTGTGCTGTGGTCAAACTCGTGGGACTCTG...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 72 bp ATGGACCTACCCACTCTGTGCCACAAACATCAGCCTTaGCTTTTATGGTGGTTTAGACTGAGAAGCTCTCCA +
Preference number: 3 (lower is better)
Translates to: MDLPTLCHKHQP*LLWWFRLRSSP
Trigger: TGGAGAGCTTCTCAGTCTAAACCACCATAAAAGTCAAGGCTGATGTTTGTGGCACAGAGTGGGTAGGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR GCA 72 bp AATTACTCCTCAGAGCGGTGGAATGGCAGAGGAGCTTaGATGAAAAATCAGAACATACCCGTACACCAAAGC +
Preference number: 3 (lower is better)
Translates to: NYSSERWNGRGA*MKNQNIPVHQS
Trigger: GCTTTGGTGTACGGGTATGTTCTGATTTTTCATGCAAGCTCCTCTGCCATTCCACCGCTCTGAGGAGTAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCGCAACAGGGCTCATCTaGAAAAGCAGCATCAATAGT +
Preference number: 3 (lower is better)
Translates to: THNSWEHTCYVCHHVITTATGLI*KSSINS
Trigger: ACTATTGATGCTGCTTTTCAAGATGAGCCCTGTTGC...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTAATGACATGGTGCCTTaGGCACTGGGACAGTTCCAG +
Preference number: 3 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSNDMVP*ALGQFQ
Trigger: CTGGAACTGTCCCAGTGCCAAAGGCACCATGTCATT...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCAACAAAAAGACAACTTaGTTAGTTCACAGCATCAGC +
Preference number: 3 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGNKKTT*LVHSIS
Trigger: GCTGATGCTGTGAACTAACAAAGTTGTCTTTTTGTT...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 72 bp AACAGTCAATGCACGACCTGCACTGTTGTCCACATGTaGACACCTGTACCGTTGCTCCTATTGAAGAGAAAT +
Preference number: 3 (lower is better)
Translates to: NSQCTTCTVVHM*TPVPLLLLKRN
Trigger: ATTTCTCTTCAATAGGAGCAACGGTACAGGTGTTCACATGTGGACAACAGTGCAGGTCGTGCATTGACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
3UTR TCA 72 bp ACAACCCACTCACAAGAGAAAGGGGTAAGAGGGCTGTaGGCAGTAACTCGGAAGAAAGCCTTGATTGATTTT +
Preference number: 3 (lower is better)
Translates to: TTHSQEKGVRGL*AVTRKKALIDF
Trigger: AAAATCAATCAAGGCTTTCTTCCGAGTTACTGCTCACAGCCCTCTTACCCCTTTCTCTTGTGAGTGGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CCA 72 bp TGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATaGCAGAGGAGCTTGCATGAAAAATCAGAACATACC +
Preference number: 3 (lower is better)
Translates to: CEVLQLLLRAVE*QRSLHEKSEHT
Trigger: GGTATGTTCTGATTTTTCATGCAAGCTCCTCTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGAGCACCAGTTCTTACTaGAATCAAAGCATATGGCAA +
Preference number: 3 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVSTSSY*NQSIWQ
Trigger: TTGCCATATGCTTTGATTCAAGTAAGAACTGGTGCT...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 72 bp TACTCAAGGTTTTGTGTAGCGCAGTGGCTGGACAAGTaGGACAAAACCTGTGTCCTAGTTAATTATAGGCAA +
Preference number: 3 (lower is better)
Translates to: YSRFCVAQWLDK*DKTCVLVNYRQ
Trigger: TTGCCTATAATTAACTAGGACACAGGTTTTGTCTCACTTGTCCAGCCACTGCGCTACACAAAACCTTGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 72 bp AAGCATGGTCAAGTGTGGGTAACACTGAATTTGAGGTaGTGCGGGTTCCTTACATTCCTGCTTTGTATATTT +
Preference number: 3 (lower is better)
Translates to: KHGQVWVTLNLR*CGFLTFLLCIF
Trigger: AAATATACAAAGCAGGAATGTAAGGAACCCGCATCACCTCAAATTCAGTGTTACCCACACTTGACCATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR-3UTR CAA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCACATTTTCACAGGTATTaGTTAGCCAATGTAGAAAGC +
Preference number: 3 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASHFHRY*LANVES
Trigger: GCTTTCTACATTGGCTAACAAATACCTGTGAAAATG...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR TCA 72 bp AATCCATCCAGGCAAAACATCAGAGATCTTACAATGTaGACAGGAATGAAATGTAAAGTTTCCACAAGACAT +
Preference number: 3 (lower is better)
Translates to: NPSRQNIRDLTM*TGMKCKVSTRH
Trigger: ATGTCTTGTGGAAACTTTACATTTCATTCCTGTTCACATTGTAAGATCTCTGATGTTTTGCCTGGATGGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp GGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTTGGGGCCCTCCCGGCTaGGCTGCTGGCCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: GSWQWVRRVYGRASFPVLWGPPG*AAGPLD
Trigger: ATCCAGGGGGCCAGCAGCTCAGCCGGGAGGGCCCCA...AAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp CCCTCCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCCCTCGGCAGGGACCCTaGTCTGGGGAGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSQMLHEAHPHCWCQWGSPRQGP*SGERGR
Trigger: CCTGCCTCTCTCCCCAGAGCAGGGTCCCTGCCGAGG...GGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCCTCGGCAGGGACCCTaGTCTGGGCAGGTTGAGCGT +
Preference number: 4 (lower is better)
Translates to: QGRPLGLPLGSPDGRSAWPRQGP*SGQVER
Trigger: ACGCTCAACCTGCCCAGAGCAGGGTCCCTGCCGAGG...CCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412332.1
CDS-3UTR CCA 90 bp TATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCGAGGGGCTGGGCCGATaGTGTGTCGGGGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YGRASFPVLALGQSSAGTEGLGR*CVGASS
Trigger: GCTGGAGGCCCCGACACACCATCGGCCCAGCCCCTC...GGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCGCACACAGTGCGGCCTaGCAGTGCAGGGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: GSALKTRTFFPGPQIAAGAHSAA*QCRGRV
Trigger: GACACGGCCCCTGCACTGCCAGGCCGCACTGTGTGC...GCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCCAGGGGCCTGGGAGCTGTGGTCCCGGCTGAGCTGCTaGCCCCCTGGATCACCTCCA +
Preference number: 4 (lower is better)
Translates to: EHCSGLVCVFEPGAWELWSRLSC*PPGSPP
Trigger: TGGAGGTGATCCAGGGGGCCAGCAGCTCAGCCGGGA...CCACAGCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAGGCCTGAGCAGTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTTGCAGGGCAGGCCCCTaGGGCTGCCACTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: GQAPGAATWFTRWKVSMACRAGP*GCHLVH
Trigger: GTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCA...AGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
3UTR CAA 72 bp GCTGTGACCTGCAGGGCAGGCCCCTGGGGCTGCCACTaGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: AVTCRAGPWGCH*VHQMEGQHGCA
Trigger: GGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAGGTCACAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR TCA 90 bp GCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTTGGGGCCCTCCCGGCTaGGCTGCTGGCCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: AATWFTRWKVSMAVPRLSWGPPG*AAGPLD
Trigger: ATCCAGGGGGCCAGCAGCTCAGCCGGGAGGGCCCCA...AGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR TCA 90 bp CAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGTGTGCCACGCTTGTCTaGGAGGGTCCTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QGRPLGLPLGSPDGRSAWCATLV*EGPGSG
Trigger: CCCACTGCCAGGACCCTCTCAGACAAGCGTGGCACA...CCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp TCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGCTCTGGGGAGAGAGCAGAGTGCCAGCCTCTaGTCCACCTCGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSACSRPVLGRDPALGREQSASL*STSRRK
Trigger: CTTCCTGCGCGAGGTGGAGCAGAGGCTGGCACTCTG...CTCTCTCCCCAGAGCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCATAGTGCGGCCTGGCAGTaGAGGGGCCGTGTCACCGCC +
Preference number: 4 (lower is better)
Translates to: LRAQDSHIFPRAPDSCWHSAAWQ*RGRVTA
Trigger: GGCGGTGACACGGCCCCTGCACTGCCAGGCCGCACT...ATGCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGCCCGGTGCTGGCCATaGCCCTCCAGGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: AATWFTRWKVSMAVPRLSARCWP*PSRELR
Trigger: CCGCAGCTCCCTGGAGGGGCATGGCCAGCACCGGGC...AGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGCTCTGCGGCCTCCCTGGGGATaGTCACGCTGTAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GLFSSACSRPVLGRDPALRPPWG*SRCSPA
Trigger: TGCTGGGCTACAGCGTGAGCATCCCCAGGGAGGCCG...CAGAGCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GCCCAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTCCCTCCCGGCTGAGCTaGTGGCCCCCTGGATCACCT +
Preference number: 4 (lower is better)
Translates to: AQALVRCREHCSGLVCVFPSRLS*WPPGSP
Trigger: AGGTGATCCAGGGGGCCAGCAGCTCAGCCGGGAGGG...AAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGCTTCGTGGAAAGGCCTaGACCAGGCTGGAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: AGQAPGAATWFTRWKVSMLRGKA*TRLECG
Trigger: CCCGCACTCCAGCCTGGTCCAGGCCTTTCCACGAAG...CATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp CTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCACCAGCAGCGGGAGGCTaGCCAGTGGGTAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: LQGRPLGLPLGSPDGRSAPAAGG*PVGSHP
Trigger: AGGATGACTACCCACTGGCCAGCCTCCCGCTGCTGG...TGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp ACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGGGCCTGGGAGCTGTaGCTTGAGCGGCTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: TQGVWQGLFSSACSRPVLGAWEL*LERLRA
Trigger: AGCGCGGAGCCGCTCAAGCCACAGCTCCCAGGCCCC...GAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp GGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCGCAGGAGATGGGACGTaGGAAGGGCCGCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GSALKTRTFFPGPQIAAGAGDGT*EGPLWC
Trigger: ACACCACAGCGGCCCTTCTCACGTCCCATCTCCTGC...GCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp CCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCGCTCAGGAGTGGGGATaGGCCCTGTTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGSGYAGCMAGPLFQCLLAQEWG*ALFSWA
Trigger: GGCCCAGCTGAACAGGGCTCATCCCCACTCCTGAGC...GAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CCATGGCACCTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCCAGCCACTGCTCCACTaGGCCTCTCTGCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: PWHLVCVYGYAGWVGRATQPLLH*ASLQLD
Trigger: GTCCAGCTGCAGAGAGGCGCAGTGGAGCAGTGGCTG...GGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp GGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGGTCCTCCTTCACCACTaGGCTGCGGAACCACACGGT +
Preference number: 4 (lower is better)
Translates to: GRPLGLPLGSPDGRSAWLVLLHH*AAEPHG
Trigger: ACCGTGTGGTTCCGCAGCGCAGTGGTGAAGGAGGAC...CAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGGCCCCTCCAGGGAGCTaGGGACACCCCGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: GMLGSNKLDGPTLPGHRGAPPGS*GHPEHH
Trigger: ATGATGCTCGGGGTGTCCGCAGCTCCCTGGAGGGGC...CCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp AGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGCCCTCCCGGCTGAGCTaGTGGCCCCCTGGATCACCT +
Preference number: 4 (lower is better)
Translates to: RWKVSMAVPRLSERVLAVPSRLS*WPPGSP
Trigger: AGGTGATCCAGGGGGCCAGCAGCTCAGCCGGGAGGG...CACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp GATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGGGGTTGGGGGCCATCCTaGACGATGCTTGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: DGRSAWLCHACLRGSWQWGWGPS*TMLGAL
Trigger: GAGGGCCCCAAGCATCGTGCAGGATGGCCCCCAACC...CCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGGAGGGGCTGGGCCGATaGTGTGTCGGGGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPREGLGR*CVGASS
Trigger: GCTGGAGGCCCCGACACACCATCGGCCCAGCCCCTC...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp GATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGGGGGGGCTCTTCCGGCTaGAGGGAGAAGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: DGRSAWLCHACLRGSWQWGGSSG*REKAED
Trigger: GTCCTCAGCCTTCTCCCTCCAGCCGGAAGAGCCCCC...CCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp CTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCAGCAGCAGCCGCTGGATaGGCTTCAGCAGGAACGTGT +
Preference number: 4 (lower is better)
Translates to: LQGRPLGLPLGSPDGRSAAAAAG*ASAGTC
Trigger: ACACGTTCCTGCTGAAGCCCATCCAGCGGCTGCTGC...TGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCCCCCGGATCCGGAAGTaGCTGGTCCCTGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: EGPGSGYAGCMAGPLFQCPRIRK*LVPATP
Trigger: AGGAGTTGCAGGGACCAGCCACTTCCGGATCCGGGG...GCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTCACTGTGGTCTGCCCTaGACACGCTGGTGTTCCGGT +
Preference number: 4 (lower is better)
Translates to: GQAPGAATWFTRWKVSMAHCGLP*TRWCSG
Trigger: ACCGGAACACCAGCGTGTCCAGGGCAGACCACAGTG...AGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp TGGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATGCACTAGGTCCTGGGTaGGGGGATGAAGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: WLERLRAQDSHIFPRAPDALGPG*GDEAPP
Trigger: GGGAGGGGCTTCATCCCCCCACCCAGGACCTAGTGC...ATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAGCCGCTCAAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GTGACCTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTTGTCTGAGAGGGTCCTaGCAGTGGGTACGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VTCRAGPWGCHLVHQMEGCLRGS*QWVRRV
Trigger: CACCCTGCGTACCCACTGCCAGGACCCTCTCAGACA...ACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAGGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR TCA 90 bp AGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTCTCCGCCAGCATCACTaGGGACAGGGCTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RVLAVGTQGVWQGLFSSALRQHH*GQGSGV
Trigger: CACTCCTGAGCCCTGTCCTCAGTGATGCTGGCGGAG...AGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp CTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCAACTGGCGCATGTTCCTaGGCAGGATGTCCCCGATTC +
Preference number: 4 (lower is better)
Translates to: LQGRPLGLPLGSPDGRSATGACS*AGCPRF
Trigger: GAATCGGGGACATCCTGCTCAGGAACATGCGCCAGT...TGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp CAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCTGGGAGCTGTGGCTTaGGCGGCTCCGCGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: QALVRCREHCSGLVCVFELGAVA*AAPRSR
Trigger: TCTTGAGCGCGGAGCCGCTCAAGCCACAGCTCCCAG...CTCAAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp AGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTCAGCCACTGCTCCACTaGGCCTCTCTGCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RVLAVGTQGVWQGLFSSAQPLLH*ASLQLD
Trigger: GTCCAGCTGCAGAGAGGCGCAGTGGAGCAGTGGCTG...AGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGGGGCCTCCAGCCACTaGTCCACTGCGCCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: AATWFTRWKVSMAVPRLSGASSH*STAPLC
Trigger: GCAGAGAGGCGCAGTGGAGCAGTGGCTGGAGGCCCC...AGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCCAGGGGCCTGGGAGCTGTGGCTTTCTCCAGCCGAGTaGTGGCTGCCACCACGATTG +
Preference number: 4 (lower is better)
Translates to: EHCSGLVCVFEPGAWELWLSPAE*WLPPRL
Trigger: CAATCGTGGTGGCAGCCAGCACTCGGCTGGAGAAAG...CCACAGCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAGGCCTGAGCAGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGACTTTGGTTGGCCATCCTGCACGATaGTTGGGGCCCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GSNKLDGPTLPGHRGTLVGHPAR*LGPSRL
Trigger: CAGCCGGGAGGGCCCCAAGCATCGTGCAGGATGGCC...AACCAAAGTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp GCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGGAGGCCCACCCACACTaGTGGTGCCAGTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: AVGTQGVWQGLFSSACSREAHPH*WCQWGS
Trigger: GGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTC...CCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCGCCCCTGATGCGCCCTaGCTGAGACTGCGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSAPDAP*LRLRAE
Trigger: CTCCGCCCGCAGTCTCAGGCAGGGCGCATCAGGGGC...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp GCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTTCCGACTGCAGGAGATaGGACGTGAGAAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: AGPWGCHLVHQMEGQHGCSDCRR*DVRRAA
Trigger: AGCGGCCCTTCTCACGTCCCATCTCCTGCAGTCGGA...ACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACGAGGGGCTGGGCCGATaGTGTGTCGGGGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ESSSSLWLSFMVLCRAPHEGLGR*CVGASS
Trigger: GCTGGAGGCCCCGACACACCATCGGCCCAGCCCCTC...GTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp GCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGGATCCGGAAGTGGCTaGTCCCTGCAACTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: AGQAPGAATWFTRWKVSMGSGSG*SLQLLC
Trigger: GCAAAGGAGTTGCAGGGACCAGCCACTTCCGGATCC...CATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGCCACTCTTGGCTGCTTaGATCGCGGAGTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GRPLGLPLGSPDGRSAWLPLLAA*IAEFRS
Trigger: GGACCTGAACTCCGCGATCCAAGCAGCCAAGAGTGG...CAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp CTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCACGGGAGGCTGGCCAGTaGGTAGTCATCCTGATGAGT +
Preference number: 4 (lower is better)
Translates to: LQGRPLGLPLGSPDGRSAREAGQ*VVILMS
Trigger: ACTCATCAGGATGACTACCCACTGGCCAGCCTCCCG...TGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCATCCCGGCTGAGCTGCTaGCCCCCTGGATCACCTCCA +
Preference number: 4 (lower is better)
Translates to: VGTQGVWQGLFSSACSRPSRLSC*PPGSPP
Trigger: TGGAGGTGATCCAGGGGGCCAGCAGCTCAGCCGGGA...TGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp GGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTAGCCCTGAGGAGGGTTaGGGGCCATCCTGCACGATG +
Preference number: 4 (lower is better)
Translates to: GSWQWVRRVYGRASFPVLSPEEG*GPSCTM
Trigger: CATCGTGCAGGATGGCCCCCAACCCTCCTCAGGGCT...AAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp GAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCGGTGTGCCCAGGCTTTaGTCCGATGCCGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: EGPGSGYAGCMAGPLFQCGVPRL*SDAEST
Trigger: AGTGCTCTCGGCATCGGACCAAAGCCTGGGCACACC...GCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCAGAGGGTCCTGGCAGTaGGTACGCAGGGTGTATGGC +
Preference number: 4 (lower is better)
Translates to: EGPGSGYAGCMAGPLFQCRGSWQ*VRRVYG
Trigger: GCCATACACCCTGCGTACCCACTGCCAGGACCCTCT...GCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR TCA 90 bp AGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTCCAGTGGGGATCCAGTaGGACCACAGCCACTTCCCA +
Preference number: 4 (lower is better)
Translates to: RVLAVGTQGVWQGLFSSAPVGIQ*DHSHFP
Trigger: TGGGAAGTGGCTGTGGTCTCACTGGATCCCCACTGG...AGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp GGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCTGTGCCACGCTTGTCTaGGAGGGTCCTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GTQGVWQGLFSSACSRPVCATLV*EGPGSG
Trigger: CCCACTGCCAGGACCCTCTCAGACAAGCGTGGCACA...GACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR TCA 90 bp TGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTGGAGGAGGGGGAGCTTaGGTCGTCGTCGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: WRRGSLSRRRHCGSASWCGGGGA*VVVVTV
Trigger: CACAGTGACGACGACGACTCAAGCTCCCCCTCCTCC...ACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR TCA 90 bp CCATGGCACCTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCACTGCGGGCGGAGGATaGCAACTGTGCGGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: PWHLVCVYGYAGWVGRATTAGGG*QLCGFK
Trigger: CTTAAAGCCGCACAGTTGTCATCCTCCGCCCGCAGT...GGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp GATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGGCTGCTCTGGGCAGGTTaGGCGTCATTCCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: DGRSAWLCHACLRGSWQWLLWAG*ASFLLP
Trigger: GGGAAGGAGGAATGACGCTCAACCTGCCCAGAGCAG...CCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412332.1
CDS-3UTR GCA 90 bp CATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGACCACAGCCACCCAAGCGCATCCCTaGAGTCTGCAGGACTCTGTA +
Preference number: 4 (lower is better)
Translates to: HEAHPHCWCQWGSSETTATQAHP*SLQDSV
Trigger: TACAGAGTCCTGCAGACTGCAGGGATGCGCTTGGGT...GGCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CCAGGCACGTTAAGCAAGAGTGAGACCCCTGAACAGTCAATGCACGACCTGCACGGGGCCTCCAGCCACTaGTCCACTGCGCCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PGTLSKSETPEQSMHDLHGASSH*STAPLC
Trigger: GCAGAGAGGCGCAGTGGAGCAGTGGCTGGAGGCCCC...GTGCAGGTCGTGCATTGACTGTTCAGGGGTCTCACTCTTGCTTAACGTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp AGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGACCACAGCCACTTGAAGTAGGCCTCGTCTaGAGGCACGCGCTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: RPTHTAGASGDPVRPQPLEVGLV*RHALVS
Trigger: AGACACAAGCGCGTGCCTGCAGACGAGGCCTACTTC...AAGTGGCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGATTGGGTAGAAGGTGGGACAGGCAGAGTGCCAGCCTCTaGTCCACCTCGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LGVRSGQSLAGLGRRWDRQSASL*STSRRK
Trigger: CTTCCTGCGCGAGGTGGAGCAGAGGCTGGCACTCTG...CCTGTCCCACCTTCTACCCAATCCTGCGAGACTCTGGCCACTCCTCACACCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR GCA 90 bp CTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCATCCCACCAGGTCCCGCTaGAGCTCCGTTAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LRAQDSHIFPRAPDSCWHPTRSR*SSVSFC
Trigger: GCAGAAGCTAACGGAGCTGCAGCGGGACCTGGTGGG...ATGCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp TCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGCTCTGGGGAGAGAGCAGCCGAGTGCTGGCTaGCACCACGATTGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSACSRPVLGRDPALGREQPSAG*HHDCFL
Trigger: CAGAAAACAATCGTGGTGGCAGCCAGCACTCGGCTG...CTCTCTCCCCAGAGCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp ACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGGCCATCCTGCACGATaGTTGGGGCCCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TWFTRWKVSMAVPRLSERGHPAR*LGPSRL
Trigger: CAGCCGGGAGGGCCCCAAGCATCGTGCAGGATGGCC...CCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp GGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTTGCTCAGGCCTTGTCTaGGTCTTTGAGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GSWQWVRRVYGRASFPVLCSGLV*VFEPGA
Trigger: GGCCCCTGGCTCAAAGACGCAGACAAGGCCTGAGCA...AAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CCTCCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCACAGGCTTTGGTCCGATaGCGAGAGCACTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PPRCYMRPTHTAGASGDPQALVR*REHCSG
Trigger: GCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTG...TGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGCTCTTTTCCAGTGCTTaGTCTAGGCCAGTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: AGQAPGAATWFTRWKVSMLFSSA*SRPVLG
Trigger: GCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAG...CATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp AGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGGCAGGCCCCTGGGGCTaGCACTTGGTTCACCAGATG +
Preference number: 4 (lower is better)
Translates to: RWKVSMAVPRLSERVLAVAGPWG*HLVHQM
Trigger: CATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGC...CACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp GTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAACTCCCACAGGGGTCTaGGCACCCAAGCGCATCCCT +
Preference number: 4 (lower is better)
Translates to: VGTQGVWQGLFSSACSRPTPTGV*APKRIP
Trigger: AGGGATGCGCTTGGGTGCCCAGACCCCTGTGGGAGT...TGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTGAGGGGCTGGGCCGATaGTGTGTCGGGGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ELESSSSLWLSFMVLCRAEGLGR*CVGASS
Trigger: GCTGGAGGCCCCGACACACCATCGGCCCAGCCCCTC...AGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp CTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGATTGGGTAGAAGGTGGGACAGGCTTCGTGGAAAGGCCTaGACCAGGCTGGAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: LGVRSGQSLAGLGRRWDRLRGKA*TRLECG
Trigger: CCCGCACTCCAGCCTGGTCCAGGCCTTTCCACGAAG...CCTGTCCCACCTTCTACCCAATCCTGCGAGACTCTGGCCACTCCTCACACCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CCA 90 bp CTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTGCACGCGCTTGTGTCTaGGCTCCTCGCAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: LAVGTQGVWQGLFSSACSARACV*APRSPS
Trigger: GGATGGACTGCGAGGAGCCCAGACACAAGCGCGTGC...AGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGCTCTGTCAGAGTCGCAGGCATaGCGTCCTCCTTCACCACTG +
Preference number: 4 (lower is better)
Translates to: GLFSSACSRPVLGRDPALSESQA*RPPSPL
Trigger: CAGTGGTGAAGGAGGACGCCATGCCTGCGACTCTGA...CAGAGCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GTGACCTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCTTTTGTGTGGGCTTTaGAGGGCCCTTCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: VTCRAGPWGCHLVHQMEGLLCGL*RALPRV
Trigger: CACTCTGGGAAGGGCCCTCCAAAGCCCACACAAAAG...ACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp CTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCATCCTCGTTGGGGGATCTaGGGGGACGAGTGCACACAG +
Preference number: 4 (lower is better)
Translates to: LRAQDSHIFPRAPDSCWHPRWGI*GDECTQ
Trigger: CTGTGTGCACTCGTCCCCCCAGATCCCCCAACGAGG...ATGCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp CCTCCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAAGCACACGTGCATTGTaGTGTTGGCCCGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PPRCYMRPTHTAGASGDPSTRAL*CWPGAG
Trigger: GCCAGCACCGGGCCAACACCACAATGCACGTGTGCT...TGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GCCCAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCTGCTGGCCCCCTaGATCACCTCCATCCACCTT +
Preference number: 4 (lower is better)
Translates to: AQALVRCREHCSGLVCVFELLAP*ITSIHL
Trigger: AAGGTGGATGGAGGTGATCCAGGGGGCCAGCAGCTC...AAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp ACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAAGCCCTGAGGAGGGTTaGGGGCCATCCTGCACGATG +
Preference number: 4 (lower is better)
Translates to: TRWKVSMAVPRLSERVLASPEEG*GPSCTM
Trigger: CATCGTGCAGGATGGCCCCCAACCCTCCTCAGGGCT...TGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp GTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCATTTGAGCCAGGGGCCTaGGAGCTGTGGCTTGAGCGG +
Preference number: 4 (lower is better)
Translates to: VGTQGVWQGLFSSACSRPFEPGA*ELWLER
Trigger: CCGCTCAAGCCACAGCTCCCAGGCCCCTGGCTCAAA...TGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGGGTACGCAGGGTGTATaGCAGGGCCTCTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GRPLGLPLGSPDGRSAWLGTQGV*QGLFSS
Trigger: ACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACC...CAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp CCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCAGAGGGTCCTGGCAGTaGGTACGCAGGGTGTATGGC +
Preference number: 4 (lower is better)
Translates to: PGSGYAGCMAGPLFQCLLRGSWQ*VRRVYG
Trigger: GCCATACACCCTGCGTACCCACTGCCAGGACCCTCT...GAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp GGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGCTCTGCCTGGGGCTGCCACTTaGTTCACCAGATGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GLFSSACSRPVLGRDPALPGAAT*FTRWKV
Trigger: GACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGG...CAGAGCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp GCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTCCTGGGGCTGCCACTTaGTTCACCAGATGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: AGPWGCHLVHQMEGQHGCPGAAT*FTRWKV
Trigger: GACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGG...ACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp GGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGACTTTGGTTTGCAGGGCAGGCCCCTaGGGCTGCCACTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: GSNKLDGPTLPGHRGTLVCRAGP*GCHLVH
Trigger: GTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCA...AACCAAAGTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCTGGGCAGGGCCACCTTaGCACACCTGCCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSWAGPP*HTCPWD
Trigger: GTCCCAGGGGCAGGTGTGCCAAGGTGGCCCTGCCCA...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CAA 72 bp TCTACGGGGGCCTTAGGGTCTCAGAGTCCCACGAGTTaGACCACAGCACACAGGAGGCCATGGCCTATGGCC +
Preference number: 4 (lower is better)
Translates to: STGALGSQSPTS*TTAHRRPWPMA
Trigger: GGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGTGGGACTCTGAGACCCTAAGGCCCCCGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp GGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCGGTTCTCCAGCCGGATaGGAATGTGCTGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GSALKTRTFFPGPQIAAGGSPAG*ECAVVW
Trigger: CCACACTACAGCACATTCTCATCCGGCTGGAGAACC...GCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp GAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCGAGCCGCGTAGATGGTaGAACAGTGTGGAACAGACC +
Preference number: 4 (lower is better)
Translates to: EGPGSGYAGCMAGPLFQCEPRRW*NSVEQT
Trigger: GGTCTGTTCCACACTGTTTCACCATCTACGCGGCTC...GCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp GAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTCAAACCTGGGCAGGTTaGGCGTCATTCCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: ERVLAVGTQGVWQGLFSSQTWAG*ASFLLP
Trigger: GGGAAGGAGGAATGACGCTCAACCTGCCCAGGTTTG...ACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp GGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGCTCCCAGATGTTACATaGGGCCCACCCACACTGCTG +
Preference number: 4 (lower is better)
Translates to: GMLGSNKLDGPTLPGHRGLPDVT*GPPTLL
Trigger: CAGCAGTGTGGGTGGGCCTCATGTAACATCTGGGAG...CCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGCATCTAGGGCTGGCCTaGGACCGGCACTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRHLGLA*DRHLWV
Trigger: CACCCACAAGTGCCGGTCTCAGGCCAGCCCTAGATG...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGGGCCTCCAGCCACTaGTCCACTGCGCCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SSSSLWLSFMVLCRAPHLGASSH*STAPLC
Trigger: GCAGAGAGGCGCAGTGGAGCAGTGGCTGGAGGCCCC...AAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp TATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCAGGGCCCCAGATAGCTaGTGGCATGCACTAGGTCCT +
Preference number: 4 (lower is better)
Translates to: YGRASFPVLALGQSSAGTRAPDS*WHALGP
Trigger: AGGACCTAGTGCATGCCAGCAGCTATCTGGGGCCCT...GGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp AGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGCGATGCCGAGAGCACTaGTCAGGCCTTGTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: RWKVSMAVPRLSERVLAVRCREH*SGLVCV
Trigger: GACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCG...CACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGAGAGAGGCAGGGTGTaGCCAGGCTTTGGTCCGATG +
Preference number: 4 (lower is better)
Translates to: VGTQGVWQGLFSSACSRPERGRV*PGFGPM
Trigger: CATCGGACCAAAGCCTGGGCACACCCTGCCTCTCTC...TGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGAGGTCAGCATGGCTGTaGCACGCTTGTCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GMLGSNKLDGPTLPGHRGRSAWL*HACLRG
Trigger: CCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCT...CCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGAGTCTGACTCTGTGCTaGTGGAGTCCTCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLSLTLC*WSPRPS
Trigger: CGACGGCCGAGGACTCCAGCAGCACAGAGTCAGACT...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp CCCTCCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCGCTCGAACGGACGTGTaGGTCTTGCTGTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PSQMLHEAHPHCWCQWGSARTDV*VLLCLL
Trigger: AAGAAGGCACAGCAAGACCCACACGTCCGTTCGAGC...GGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GCCCAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGCTGAGGACTCTTCGTaGAAAGGCCTGGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: AQALVRCREHCSGLVCVFAEDSS*KGLDQA
Trigger: AGCCTGGTCCAGGCCTTTCCACGAAGAGTCCTCAGC...AAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp AGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCGGGGGCTCTTCCGGCTaGAGGGAGAAGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: SRRRHCGSASWCYAELHTGGSSG*REKAED
Trigger: GTCCTCAGCCTTCTCCCTCCAGCCGGAAGAGCCCCC...GGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp CTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGCGTGCATTGTGGTGTTaGCCCGGTGCTGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: LPLGSPDGRSAWLCHACLRALWC*PGAGHA
Trigger: GGCATGGCCAGCACCGGGCCAACACCACAATGCACG...CAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp AGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGTCGACAGCTGCACTGTaGTCTGCCCTGGACACGCTG +
Preference number: 4 (lower is better)
Translates to: RWKVSMAVPRLSERVLAVSTAAL*SALDTL
Trigger: CAGCGTGTCCAGGGCAGACCACAGTGCAGCTGTCGA...CACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCTGTCTGAGAGGGTCCTaGCAGTGGGTACGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GTQGVWQGLFSSACSRPVCLRGS*QWVRRV
Trigger: CACCCTGCGTACCCACTGCCAGGACCCTCTCAGACA...GACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp GAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTAGGGACAGGCGAGGGATaGAGGAGGGGGAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: EEGELESSSSLWLSFMVLGTGEG*RRGSLS
Trigger: ACTCAAGCTCCCCCTCCTCCATCCCTCGCCTGTCCC...TAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGACAAAACCCGACACCTaGACCAGGCTGGAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLTKPDT*TRLECG
Trigger: CCCGCACTCCAGCCTGGTCCAGGTGTCGGGTTTTGT...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp CCATGGCACCTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCGGAGGCCATGGCCTATaGCCATCTTTCCCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: PWHLVCVYGYAGWVGRATGGHGL*PSFPGL
Trigger: TAACCCTGGGAAAGATGGCCATAGGCCATGGCCTCC...GGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp CCATGGCACCTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCTGCTGCAGGGCACTATaGCCTCAGGCTGAATTGCTC +
Preference number: 4 (lower is better)
Translates to: PWHLVCVYGYAGWVGRATCCRAL*PQAELL
Trigger: GAGCAATTCAGCCTGAGGCCATAGTGCCCTGCAGCA...GGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp AGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGACCACAGCCACTTCCAGCAGCTTTACTCTaGGGTGCAGGTGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RPTHTAGASGDPVRPQPLPAALL*GAGASL
Trigger: AAGAGAAGCACCTGCACCTCAGAGTAAAGCTGCTGG...AAGTGGCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp AGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGCAGGAGATGGGACGTaGGAAGGGCCGCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RGSLSRRRHCGSASWCYAAGDGT*EGPLWC
Trigger: ACACCACAGCGGCCCTTCTCACGTCCCATCTCCTGC...TGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGAGGAGGAGCCCCGGCTaGAGAAGACGGCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: AVGTQGVWQGLFSSACSRRRSPG*RRRLLL
Trigger: AAGCAAAAGCCGTCTTCTTCAGCCGGGGCTCCTCCT...CCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp TTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACGCTCAGGAGTGGGGATaGGCCCTGTTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSRRRHCGSASWCYAELHAQEWG*ALFSWA
Trigger: GGCCCAGCTGAACAGGGCTCATCCCCACTCCTGAGC...GTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp AGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATCTCCGCCAGCATCACTaGGGACAGGGCTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RRGSLSRRRHCGSASWCYLRQHH*GQGSGV
Trigger: CACTCCTGAGCCCTGTCCTCAGTGATGCTGGCGGAG...ATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp TGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTACTGGCGCATGTTCCTaGGCAGGATGTCCCCGATTC +
Preference number: 4 (lower is better)
Translates to: WRRGSLSRRRHCGSASWCTGACS*AGCPRF
Trigger: GAATCGGGGACATCCTGCTCAGGAACATGCGCCAGT...ACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR TCA 90 bp GCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCCACCCTGCCAGGAGCAATaGGGTTCTCTATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: ALVRCREHCSGLVCVFEPPCQEQ*GSLCPP
Trigger: TGGTGGGCATAGAGAACCTCATTGCTCCTGGCAGGG...TGGCTCAAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp GCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGCAGGCCCTTCTTGGTaGGCTTGTGAAGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: AATWFTRWKVSMAVPRLSAGPSW*ACEGSP
Trigger: AGGGCTGCCTTCACAAGCTCACCAAGAAGGGCCTGC...AGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp GGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCCCGAGCATCATCTTCTaGCTCCTGCTCCAGAGATAC +
Preference number: 4 (lower is better)
Translates to: GSALKTRTFFPGPQIAAGPSIIF*LLLQRY
Trigger: GTATCTCTGGAGCAGGAGTCAGAAGATGATGCTCGG...GCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp GAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACGGAGGAGGGGGAGCTTaGGTCGTCGTCGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: ESSSSLWLSFMVLCRAPHGGGGA*VVVVTV
Trigger: CACAGTGACGACGACGACTCAAGCTCCCCCTCCTCC...GTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR TCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCCTGATGCGCCCTGCCTaGGACTGCGGGCGGAGGATG +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGLMRPA*DCGRRM
Trigger: CATCCTCCGCCCGCAGTCTCAGGCAGGGCGCATCAG...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp GTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTCAGCCACTGCTCCACTaGGCCTCTCTGCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VVVVTVAQLHGVMQSSTPQPLLH*ASLQLD
Trigger: GTCCAGCTGCAGAGAGGCGCAGTGGAGCAGTGGCTG...AGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp AGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATCAGCCACTGCTCCACTaGGCCTCTCTGCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RRGSLSRRRHCGSASWCYQPLLH*ASLQLD
Trigger: GTCCAGCTGCAGAGAGGCGCAGTGGAGCAGTGGCTG...ATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp GGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTCAAAGGCACCTGAAATaGAGGGCTCAGACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSWQWVRRVYGRASFPVLQRHLK*RAQTQG
Trigger: CCCCTGAGTCTGAGCCCTGCATTTCAGGTGCCTTTG...AAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGCAGAGTGCCAGCCTCTaGTCCACCTCGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RRRHCGSASWCYAELHTLQSASL*STSRRK
Trigger: CTTCCTGCGCGAGGTGGAGCAGAGGCTGGCACTCTG...CAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR GCA 90 bp ACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCAGCTGCACTGTGGTCTaGCCTGGACACGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: TQGVWQGLFSSACSRPVLSCTVV*PGHAGV
Trigger: AACACCAGCGTGTCCAGGGCAGACCACAGTGCAGCT...GAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp AGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGCTGGTTCTCGACAGCTaGACTGTGGTCTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RWKVSMAVPRLSERVLAVLVLDS*TVVCPG
Trigger: TCCAGGGCAGACCACAGTGCAGCTGTCGAGAACCAG...CACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCCATAGTCTTTGTGTATaGCATCGGCCTCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: EGPGSGYAGCMAGPLFQCHSLCV*HRPPWG
Trigger: TCCCCAGGGAGGCCGATGGCATACACAAAGACTATG...GCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGTGCCGGTCACACCGGTaGTCCCCACCGGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRCRSHR*SPPEGN
Trigger: ATTTCCTTCCGGTGGGGAGCACCGGTGTGACCGGCA...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGTGCATCCGGCTGGCCTaGGCCTTCACCTCAAATAGC +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLCIRLA*AFTSNS
Trigger: GCTATTTGAGGTGAAGGCGCAGGCCAGCCGGATGCA...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp CCATGGCACCTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCATTGACTGGCTGAGCTaGATGTGTGCACAGACAGCC +
Preference number: 4 (lower is better)
Translates to: PWHLVCVYGYAGWVGRATIDWLS*MCAQTA
Trigger: GGCTGTCTGTGCACACATGCAGCTCAGCCAGTCAAT...GGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGATTGACGGGGACTGCTaGAGGATTGCGTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLIDGDC*RIASPL
Trigger: CAGAGGGGACGCAATCCTGCAGCAGTCCCCGTCAAT...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGACCACAGCCACTTGCTTCTCTTGCATTCTaGGCAAGAGAGTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RPTHTAGASGDPVRPQPLASLAF*ARESAQ
Trigger: CTGGGCAGACTCTCTTGCCCAGAATGCAAGAGAAGC...AAGTGGCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp AGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTCAGAGGGGACCAGAGTaGAGGGAGAGAGCGAGTAAA +
Preference number: 4 (lower is better)
Translates to: RVLAVGTQGVWQGLFSSAQRGPE*RERASK
Trigger: TTTACTCGCTCTCTCCCTCCACTCTGGTCCCCTCTG...AGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGCTGTCCTTAAACTCTaGCAGGCCAGAGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: VGTQGVWQGLFSSACSRPAVLKL*QARGDQ
Trigger: CTGGTCCCCTCTGGCCTGCCAGAGTTTAAGGACAGC...TGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGGCTGTCCTTAAACTCTaGCAGGCCAGAGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLAVLKL*QARGDQ
Trigger: CTGGTCCCCTCTGGCCTGCCAGAGTTTAAGGACAGC...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp GTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGCTTCGTGGAAAGGCCTaGACCAGGCTGGAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: VVVTVAQLHGVMQSSTPWLRGKA*TRLECG
Trigger: CCCGCACTCCAGCCTGGTCCAGGCCTTTCCACGAAG...CCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp GAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTGGGGGCTCTTCCGGCTaGAGGGAGAAGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ELESSSSLWLSFMVLCRAGGSSG*REKAED
Trigger: GTCCTCAGCCTTCTCCCTCCAGCCGGAAGAGCCCCC...AGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp GTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGGCACGCGCTTGTGTCTaGGCTCCTCGCAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: VVVTVAQLHGVMQSSTPWARACV*APRSPS
Trigger: GGATGGACTGCGAGGAGCCCAGACACAAGCGCGTGC...CCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp GGATGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGCTTTTGTGTGGGCTTTaGAGGGCCCTTCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GWRRGSLSRRRHCGSASWLLCGL*RALPRV
Trigger: CACTCTGGGAAGGGCCCTCCAAAGCCCACACAAAAG...CCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CCA 90 bp CTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGCTGCCCTGGACACGCTaGTGTTCCGGTACCAGCACA +
Preference number: 4 (lower is better)
Translates to: LPLGSPDGRSAWLCHACLLPWTR*CSGTST
Trigger: TGTGCTGGTACCGGAACACCAGCGTGTCCAGGGCAG...CAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp CTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTCACTGCTGGTGCCAGTaGGGATCCAGTGAGACCACA +
Preference number: 4 (lower is better)
Translates to: LAVGTQGVWQGLFSSACSHCWCQ*GSSETT
Trigger: TGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTG...AGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGTGGTGCCTTTGGCACTaGGACAGTTCCAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLWCLWH*DSSRHP
Trigger: GGGATGCCTGGAACTGTCCCAGTGCCAAAGGCACCA...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp CCATGGCACCTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCCCCTTCCCATTGTCCTaGGACAGAATGATGCCCATG +
Preference number: 4 (lower is better)
Translates to: PWHLVCVYGYAGWVGRATPFPLS*DRMMPM
Trigger: CATGGGCATCATTCTGTCCCAGGACAATGGGAAGGG...GGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp AGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCGCAGGAGATGGGACGTaGGAAGGGCCGCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SLSRRRHCGSASWCYAELAGDGT*EGPLWC
Trigger: ACACCACAGCGGCCCTTCTCACGTCCCATCTCCTGC...GAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp CTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGAAACCTGGGGATCTGTaGGGGAGCTGCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGSPDGRSAWLCHACLRGKPGDL*GSCCCP
Trigger: AGGACAGCAGCAGCTCCCTCACAGATCCCCAGGTTT...CCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp CTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCCAGCTGCAGCTGGACTCTTaGCGTAGGAAACCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LWSDAESTAQALSASLSQLQLDS*RRKPGD
Trigger: ATCCCCAGGTTTCCTACGTCAAGAGTCCAGCTGCAG...CTGGCTCAAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp CAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGTTCTTGGTGAGCTTGTaGAGGCAGCCCTCACGGATG +
Preference number: 4 (lower is better)
Translates to: QALVRCREHCSGLVCVFEFLVSL*RQPSRM
Trigger: CATCCGTGAGGGCTGCCTTCACAAGCTCACCAAGAA...CTCAAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp CGAGGCAGGAAAAGGGCACCTAGGCTGAATGCAGTTCTTCAAGTGGGGCTATCTGGAGGAGGGGGAGCTTaGGTCGTCGTCGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: RGRKRAPRLNAVLQVGLSGGGGA*VVVVTV
Trigger: CACAGTGACGACGACGACTCAAGCTCCCCCTCCTCC...AGATAGCCCCACTTGAAGAACTGCATTCAGCCTAGGTGCCCTTTTCCTGCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR TCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGCAGCTGCTCACGACATaGCAAAACCCGACACCTGGA +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLQLLTT*QNPTPG
Trigger: TCCAGGTGTCGGGTTTTGTCATGTCGTGAGCAGCTG...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGTCGTGGGTGGGTAGCTaGGCTGCTCTAACTGGTCGA +
Preference number: 4 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRSWVGS*AALTGR
Trigger: TCGACCAGTTAGAGCAGCTCAGCTACCCACCCACGA...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGGGCACTTGTGGGTGCTaGGCTGCATGGCAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRGTCGC*AAWQWF
Trigger: AAACCACTGCCATGCAGCTCAGCACCCACAAGTGCC...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGCAAACAGTCCTGTCCTaGCCTCAGGTTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLQTVLS*PQVHCC
Trigger: GCAGCAGTGAACCTGAGGTCAGGACAGGACTGTTTG...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp CCTCCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCACGCATCCCTGCAGTCTaGAGGACTCTGTATGTTCCT +
Preference number: 4 (lower is better)
Translates to: PPRCYMRPTHTAGASGDPRIPAV*RTLYVP
Trigger: AGGAACATACAGAGTCCTGCAGACTGCAGGGATGCG...TGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGACTTTGGTTCTGGGCAAGAGAGTCTaGCCAGGCTCAAGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: GSNKLDGPTLPGHRGTLVLGKRV*PGSRVL
Trigger: TAGCACCCTTGAGCCTGGGCAGACTCTCTTGCCCAG...AACCAAAGTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CCCTTGGGAACTCTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGATTGGGTAGACTGGGCAAGAGAGTCTaGCCAGGCTCAAGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: PLGTLGVRSGQSLAGLGRLGKRV*PGSRVL
Trigger: TAGCACCCTTGAGCCTGGGCAGACTCTCTTGCCCAG...TCTACCCAATCCTGCGAGACTCTGGCCACTCCTCACACCTAGAGTTCCCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp CCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGTTCTCAAGGCAGTGCTaGTGGCCAGGCAAATACTCG +
Preference number: 4 (lower is better)
Translates to: PRCYMRPTHTAGASGDPVFSRQC*WPGKYS
Trigger: CGAGTATTTGCCTGGCCAGCAGCACTGCCTTGAGAA...CACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTACCCATGTGGGAAACTaGCAGTTGAATCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: GQAPGAATWFTRWKVSMATHVGN*QLNLGS
Trigger: GGAACCAAGATTCAACTGGCAGTTTCCCACATGGGT...AGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGGTCCTCCTTCACCACTaGGCTGCGGAACCACACGGT +
Preference number: 4 (lower is better)
Translates to: GSLSRRRHCGSASWCYAEVLLHH*AAEPHG
Trigger: ACCGTGTGGTTCCGCAGCGCAGTGGTGAAGGAGGAC...CTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp CGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGTCCTCCTTCACCACTaGGCTGCGGAACCACACGGT +
Preference number: 4 (lower is better)
Translates to: RRRHCGSASWCYAELHTLVLLHH*AAEPHG
Trigger: ACCGTGTGGTTCCGCAGCGCAGTGGTGAAGGAGGAC...CAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp GGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGACTTTGGTTACCGCCACTCTTGGCTaGTTGGATCGCGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GSNKLDGPTLPGHRGTLVTATLG*LDRGVQ
Trigger: CTGAACTCCGCGATCCAAGCAGCCAAGAGTGGCGGT...AACCAAAGTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGAGGTCAGCATGGCTGTaGCACGCTTGTCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LGSPDGRSAWLCHACLRGRSAWL*HACLRG
Trigger: CCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCT...CCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp TTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGCAGGCCCCTGGGGCTaGCACTTGGTTCACCAGATG +
Preference number: 4 (lower is better)
Translates to: FPLEGMLGSNKLDGPTLPAGPWG*HLVHQM
Trigger: CATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGC...TGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp GGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGGGGGACTTTGGTTTCTaGTTCTCTAGAGGTACATGG +
Preference number: 4 (lower is better)
Translates to: GRPLGLPLGSPDGRSAWLGDFGF*FSRGTW
Trigger: CCATGTACCTCTAGAGAAGCAGAAACCAAAGTCCCC...CAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp CTCAGCTTCCGTCGAGGCAGGAAAAGGGCACCTAGGCTGAATGCAGTTCTTCAAACTCCCACAGGGGTCTaGGCACCCAAGCGCATCCCT +
Preference number: 4 (lower is better)
Translates to: LSFRRGRKRAPRLNAVLQTPTGV*APKRIP
Trigger: AGGGATGCGCTTGGGTGCCCAGACCCCTGTGGGAGT...TTGAAGAACTGCATTCAGCCTAGGTGCCCTTTTCCTGCCTCGACGGAAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CCA 90 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTACTCCCACAGGGGTCTaGGCACCCAAGCGCATCCCT +
Preference number: 4 (lower is better)
Translates to: SSSSLWLSFMVLCRAPHLTPTGV*APKRIP
Trigger: AGGGATGCGCTTGGGTGCCCAGACCCCTGTGGGAGT...AAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp GGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGTCCGACTGCAGGAGATaGGACGTGAGAAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: GSLSRRRHCGSASWCYAESDCRR*DVRRAA
Trigger: AGCGGCCCTTCTCACGTCCCATCTCCTGCAGTCGGA...CTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp GGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCATTTTGGTGGTGCCCTaGAACACGAGTACACCCATG +
Preference number: 4 (lower is better)
Translates to: GSALKTRTFFPGPQIAAGILVVP*NTSTPM
Trigger: CATGGGTGTACTCGTGTTCCAGGGCACCACCAAAAT...GCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp ATGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGCAGAGGGGACCAGAGTaGAGGGAGAGAGCGAGTAAA +
Preference number: 4 (lower is better)
Translates to: MEEGELESSSSLWLSFMVQRGPE*RERASK
Trigger: TTTACTCGCTCTCTCCCTCCACTCTGGTCCCCTCTG...CACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp GAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCGCTGTCCTTAAACTCTaGCAGGCCAGAGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: EGELESSSSLWLSFMVLCAVLKL*QARGDQ
Trigger: CTGGTCCCCTCTGGCCTGCCAGAGTTTAAGGACAGC...GCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp CTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCAGCACGCGCTTGTGTCTaGGCTCCTCGCAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: LESSSSLWLSFMVLCRAPARACV*APRSPS
Trigger: GGATGGACTGCGAGGAGCCCAGACACAAGCGCGTGC...TGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp AGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGATGTCACCGCCACTCTTaGCTGCTTGGATCGCGGAGT +
Preference number: 4 (lower is better)
Translates to: RCYMRPTHTAGASGDPVRCHRHS*LLGSRS
Trigger: ACTCCGCGATCCAAGCAGCCAAGAGTGGCGGTGACA...TCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp TCTGCTTCTCTAGAGGTACATGGGGAACAAGCGTGGCTTCTGCCAGACTTGTTTGTGTTGGCCCGGTGCTaGCCATGCCCCTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SASLEVHGEQAWLLPDLFVLARC*PCPSRE
Trigger: CTCCCTGGAGGGGCATGGCCAGCACCGGGCCAACAC...AAACAAGTCTGGCAGAAGCCACGCTTGTTCCCCATGTACCTCTAGAGAAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGGACAGGCGAGGGATaGAGGAGGGGGAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: SSSSLWLSFMVLCRAPHLGTGEG*RRGSLS
Trigger: ACTCAAGCTCCCCCTCCTCCATCCCTCGCCTGTCCC...AAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCGGCGCTGCATCCGGCTaGCCTGCGCCTTCACCTCAA +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGGAASG*PAPSPQ
Trigger: TTGAGGTGAAGGCGCAGGCCAGCCGGATGCAGCGCC...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp CCCTCCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCATTCTTCACCATGAGTaGAGAAAACACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSQMLHEAHPHCWCQWGSILHHE*RKHLGL
Trigger: GAGGCCGAGGTGTTTTCTTCACTCATGGTGAAGAAT...GGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp TGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTCCAGCAGCTTTACTCTaGGGTGCAGGTGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: WRRGSLSRRRHCGSASWCPAALL*GAGASL
Trigger: AAGAGAAGCACCTGCACCTCAGAGTAAAGCTGCTGG...ACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAAGGAGGAGCCCCGGCTaGAGAAGACGGCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GELESSSSLWLSFMVLCRRRSPG*RRRLLL
Trigger: AAGCAAAAGCCGTCTTCTTCAGCCGGGGCTCCTCCT...TCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCGTAAAAGGCATTCGCTaGAGATGGGGAGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GTQGVWQGLFSSACSRPVVKGIR*RWGGRS
Trigger: ACTCCTGCCTCCCCATCTTCAGCGAATGCCTTTTAC...GACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp GAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACAAACCTGGGGATCTGTaGGGGAGCTGCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ESSSSLWLSFMVLCRAPHKPGDL*GSCCCP
Trigger: AGGACAGCAGCAGCTCCCTCACAGATCCCCAGGTTT...GTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGAAACCTGGGGATCTGTaGGGGAGCTGCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GSLSRRRHCGSASWCYAEKPGDL*GSCCCP
Trigger: AGGACAGCAGCAGCTCCCTCACAGATCCCCAGGTTT...CTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTGGAGGGAGAAGGCTaGGGACTCTTCGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ESSSSLWLSFMVLCRAPHLEGEG*GLFVER
Trigger: CCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAG...GTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GGGAGAACTGTTCCAGGCACGTTAAGCAAGAGTGAGACCCCTGAACAGTCAATGCTCCGCCAGCATCACTaGGGACAGGGCTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: GRTVPGTLSKSETPEQSMLRQHH*GQGSGV
Trigger: CACTCCTGAGCCCTGTCCTCAGTGATGCTGGCGGAG...CATTGACTGTTCAGGGGTCTCACTCTTGCTTAACGTGCCTGGAACAGTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR TCA 90 bp AGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAACTGGCGCATGTTCCTaGGCAGGATGTCCCCGATTC +
Preference number: 4 (lower is better)
Translates to: RGSLSRRRHCGSASWCYATGACS*AGCPRF
Trigger: GAATCGGGGACATCCTGCTCAGGAACATGCGCCAGT...TGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR TCA 90 bp GTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGACTGGCGCATGTTCCTaGGCAGGATGTCCCCGATTC +
Preference number: 4 (lower is better)
Translates to: VVVTVAQLHGVMQSSTPWTGACS*AGCPRF
Trigger: GAATCGGGGACATCCTGCTCAGGAACATGCGCCAGT...CCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR TCA 90 bp CCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCCCTTGTCTGCGTCTTTaGGCCAGGGGCCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PIYFPLEGMLGSNKLDGPPCLRL*ARGLGA
Trigger: AGCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAGG...GGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGCTGGCTGTTTCTCAGTaGGCTGGTCTCAGAAGGACC +
Preference number: 4 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRLAVSQ*AGLRRT
Trigger: GGTCCTTCTGAGACCAGCTCACTGAGAAACAGCCAG...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TTATGCAGAGCTCCACACCTTGGGCGGTCACGTGGTGAACTCATGAGCAGCCTGACCCAAGCGCATCCCTaGAGTCTGCAGGACTCTGTA +
Preference number: 4 (lower is better)
Translates to: LCRAPHLGRSRGELMSSLTQAHP*SLQDSV
Trigger: TACAGAGTCCTGCAGACTGCAGGGATGCGCTTGGGT...CAGGCTGCTCATGAGTTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGCATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp GTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTCTGGGCAAGAGAGTCTaGCCAGGCTCAAGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: VVVVTVAQLHGVMQSSTPLGKRV*PGSRVL
Trigger: TAGCACCCTTGAGCCTGGGCAGACTCTCTTGCCCAG...AGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp CCTCCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCATCGTTCACTTTGAGGTaGTCTCGGTCCAGCGTTTCA +
Preference number: 4 (lower is better)
Translates to: PPRCYMRPTHTAGASGDPSFTLR*SRSSVS
Trigger: TGAAACGCTGGACCGAGAGCACCTCAAAGTGAACGA...TGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTTCCACTGCGCCTCTCTaGAGCTGGACTCTTGACGTA +
Preference number: 4 (lower is better)
Translates to: AATWFTRWKVSMAVPRLSSTAPL*SWTLDV
Trigger: TACGTCAAGAGTCCAGCTGCAGAGAGGCGCAGTGGA...AGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp AGTCCCTTGGGAACTCTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGATTGGGTCAAAGGCACCTGAAATaGAGGGCTCAGACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SPLGTLGVRSGQSLAGLGQRHLK*RAQTQG
Trigger: CCCCTGAGTCTGAGCCCTGCATTTCAGGTGCCTTTG...ACCCAATCCTGCGAGACTCTGGCCACTCCTCACACCTAGAGTTCCCAAGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp GAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACGAAGTAGGCCTCGTCTaGAGGCACGCGCTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: ESSSSLWLSFMVLCRAPHEVGLV*RHALVS
Trigger: AGACACAAGCGCGTGCCTGCAGACGAGGCCTACTTC...GTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp CTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGCCGGATGAGAATGTaGTGTAGTGTGGTGGTCACC +
Preference number: 4 (lower is better)
Translates to: LAVGTQGVWQGLFSSACSSRMRM*CSVVVT
Trigger: GGTGACCACCACACTACAGCACATTCTCATCCGGCT...AGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGAGCTCCGTTAGCTTCTaGAGGTTCTCCAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: LGSPDGRSAWLCHACLRGSSVSF*RFSSRM
Trigger: CATCCGGCTGGAGAACCTGCAGAAGCTAACGGAGCT...CCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAAAAACATCCTCTGCTaGAGGCCCTTCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PRCYMRPTHTAGASGDPVKNILC*RPFLVS
Trigger: GCTCACCAAGAAGGGCCTGCAGCAGAGGATGTTTTT...CACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp TCTGCTTCTCTAGAGGTACATGGGGAACAAGCGTGGCTTCTGCCAGACTTGTTTGACGAGTGCACACAGTaGGGCCTGGCAGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SASLEVHGEQAWLLPDLFDECTQ*GLAVQG
Trigger: CCCCTGCACTGCCAGGCCGCACTGTGTGCACTCGTC...AAACAAGTCTGGCAGAAGCCACGCTTGTTCCCCATGTACCTCTAGAGAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp TCTGCTTCTCTAGAGGTACATGGGGAACAAGCGTGGCTTCTGCCAGACTTGTTTGGTTGGGGGCCATCCTaGACGATGCTTGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SASLEVHGEQAWLLPDLFGWGPS*TMLGAL
Trigger: GAGGGCCCCAAGCATCGTGCAGGATGGCCCCCAACC...AAACAAGTCTGGCAGAAGCCACGCTTGTTCCCCATGTACCTCTAGAGAAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp CTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGCTCTTTTCCAGTGCTTaGTCTAGGCCAGTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LPLGSPDGRSAWLCHACLLFSSA*SRPVLG
Trigger: GCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAG...CAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCAGCAGAGCCCAATGCTaGTGCAGGGCACTATGGCCT +
Preference number: 4 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSSRAQC*CRALWP
Trigger: AGGCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCT...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGCCAACAGGCACTGTCTaGTGGTGGCCTCTCATTGAC +
Preference number: 4 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRPTGTV*WWPLID
Trigger: GTCAATGAGAGGCCACCAGCAGACAGTGCCTGTTGG...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp GCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCCATCAAGGCAGTGCTGCTaGCCAGGCAAATACTCGTTC +
Preference number: 4 (lower is better)
Translates to: ALVRCREHCSGLVCVFEPSRQCC*PGKYSF
Trigger: GAACGAGTATTTGCCTGGCCAGCAGCACTGCCTTGA...TGGCTCAAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGGCTGTCCTTAAACTCTaGCAGGCCAGAGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: VVVTVAQLHGVMQSSTPWAVLKL*QARGDQ
Trigger: CTGGTCCCCTCTGGCCTGCCAGAGTTTAAGGACAGC...CCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp GAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCGCGCCTCTCTGCAGCTaGACTCTTGACGTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: EGELESSSSLWLSFMVLCAPLCS*TLDVGN
Trigger: GTTTCCTACGTCAAGAGTCCAGCTGCAGAGAGGCGC...GCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp GAGGGAGGGAGAACTGTTCCAGGCACGTTAAGCAAGAGTGAGACCCCTGAACAGGCTGAGGACTCTTCGTaGAAAGGCCTGGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: EGGRTVPGTLSKSETPEQAEDSS*KGLDQA
Trigger: AGCCTGGTCCAGGCCTTTCCACGAAGAGTCCTCAGC...CTGTTCAGGGGTCTCACTCTTGCTTAACGTGCCTGGAACAGTTCTCCCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CCA 90 bp GTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGGCTGAGGACTCTTCGTaGAAAGGCCTGGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: VVVTVAQLHGVMQSSTPWAEDSS*KGLDQA
Trigger: AGCCTGGTCCAGGCCTTTCCACGAAGAGTCCTCAGC...CCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp GGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGTCAGAGTCGCAGGCATaGCGTCCTCCTTCACCACTG +
Preference number: 4 (lower is better)
Translates to: GSLSRRRHCGSASWCYAESESQA*RPPSPL
Trigger: CAGTGGTGAAGGAGGACGCCATGCCTGCGACTCTGA...CTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CCA 90 bp GAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCCTTTTGTGTGGGCTTTaGAGGGCCCTTCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: EGELESSSSLWLSFMVLCLLCGL*RALPRV
Trigger: CACTCTGGGAAGGGCCCTCCAAAGCCCACACAAAAG...GCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CCA 90 bp AGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGATCTCCAGCCGAGTGCTaGCTGCCACCACGATTGTTT +
Preference number: 4 (lower is better)
Translates to: RCYMRPTHTAGASGDPVRSPAEC*LPPRLF
Trigger: AAACAATCGTGGTGGCAGCCAGCACTCGGCTGGAGA...TCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp TATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCACTTGGTTCACCAGATaGAAGGTCAGCATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: YGRASFPVLALGQSSAGTTWFTR*KVSMAV
Trigger: CACAGCCATGCTGACCTTCCATCTGGTGAACCAAGT...GGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp CTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGCTCTGGGGTTCTCTAGAGGTACATaGGGAACAAGCGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LFSSACSRPVLGRDPALGFSRGT*GTSVAS
Trigger: AGAAGCCACGCTTGTTCCCCATGTACCTCTAGAGAA...CCCCAGAGCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGCTAAACCACACAGCGTaGGTGAGTGGGTTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLLNHTA*VSGLPC
Trigger: ACAAGGCAACCCACTCACCCACGCTGTGTGGTTTAG...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCGCACACAGGAGGCCATaGCCTATGGCCATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSAHRRP*PMAIFP
Trigger: GGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGC...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCTACGGGTACGCTGGATaGGTGGGCAGGGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGYGYAG*VGRATL
Trigger: CAAGGTGGCCCTGCCCACCCATCCAGCGTACCCGTA...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp CTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCCAGTGGGAAACTGCCAGTTaGATCTTGGTTCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LWSDAESTAQALSASLSQWETAS*ILVPSL
Trigger: CAGGGAAGGAACCAAGATTCAACTGGCAGTTTCCCA...CTGGCTCAAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp GAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTAGTAAAAGGCATTCGCTaGAGATGGGGAGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: EEGELESSSSLWLSFMVLVKGIR*RWGGRS
Trigger: ACTCCTGCCTCCCCATCTTCAGCGAATGCCTTTTAC...TAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGCTGCAGCTGGACTCTTaGCGTAGGAAACCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: VVVTVAQLHGVMQSSTPWLQLDS*RRKPGD
Trigger: ATCCCCAGGTTTCCTACGTCAAGAGTCCAGCTGCAG...CCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTCTGGAGGGAGAAGGCTaGGGACTCTTCGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SSSSLWLSFMVLCRAPHLLEGEG*GLFVER
Trigger: CCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAG...AAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTTAATCAAATGTGTGTaGACAAAGCAGTCGCCCATC +
Preference number: 4 (lower is better)
Translates to: GRPLGLPLGSPDGRSAWLLIKCV*TKQSPI
Trigger: GATGGGCGACTGCTTTGTTCACACACATTTGATTAA...CAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR TCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGGCTCTAACTGGTCGATaGTGTCAGAGAACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLALTGR*CQRTGR
Trigger: CCTTCCAGTTCTCTGACATCATCGACCAGTTAGAGC...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGCAGTGGCTGGACAAGTaGGACAAAACCTGTGTCCTA +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLQWLDK*DKTCVL
Trigger: TAGGACACAGGTTTTGTCTCACTTGTCCAGCCACTG...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCGGCTGCAGTGAGATGTaGCTGTGCCACCATACTCCA +
Preference number: 4 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSGCSEM*LCHHTP
Trigger: TGGAGTATGGTGGCACAGTCACATCTCACTGCAGCC...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp GGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCACGTGGTGAACTCATaGGCAGCCTTTAACTGGCGC +
Preference number: 4 (lower is better)
Translates to: GSLSRRRHCGSASWCYAEHVVNS*AAFNWR
Trigger: GCGCCAGTTAAAGGCTGCTCATGAGTTCACCACGTG...CTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422951.1
ENST00000627550.2
CDS-3UTR TCA 90 bp GAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCACGTGGTGAACTCATaGGCAGCCTTTAACTGGCGC +
Preference number: 4 (lower is better)
Translates to: ESSSSLWLSFMVLCRAPHHVVNS*AAFNWR
Trigger: GCGCCAGTTAAAGGCTGCTCATGAGTTCACCACGTG...GTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422951.1
ENST00000627550.2
CDS-3UTR TCA 90 bp AGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATTGGGCGGTCACGTGGTaGACTCATGAGCAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: RRGSLSRRRHCGSASWCYWAVTW*THEQPL
Trigger: TAAAGGCTGCTCATGAGTTCACCACGTGACCGCCCA...ATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422951.1
ENST00000627550.2
CDS-3UTR GCA 90 bp GGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCTGCAGGTGCTTCTCTTaGATTCTGGGCAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GTQGVWQGLFSSACSRPVCRCFS*ILGKRV
Trigger: GACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCA...GACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTATCTTCTCAAGGCAGTaGTGCTGGCCAGGCAAATAC +
Preference number: 4 (lower is better)
Translates to: LAVGTQGVWQGLFSSACSIFSRQ*CWPGKY
Trigger: GTATTTGCCTGGCCAGCAGCACTGCCTTGAGAAGAT...AGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCAAAGGCACCTGAAATaGAGGGCTCAGACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSLSRRRHCGSASWCYAEQRHLK*RAQTQG
Trigger: CCCCTGAGTCTGAGCCCTGCATTTCAGGTGCCTTTG...CTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp CAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGTCCCTGCAACTCCTTTaGTTGTGTACAGCAACATAT +
Preference number: 4 (lower is better)
Translates to: QGRPLGLPLGSPDGRSAWSLQLL*LCTATY
Trigger: ATATGTTGCTGTACACAAGCAAAGGAGTTGCAGGGA...CCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGAAGTGGCTGGTCCCTaGAACTCCTTTGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: VGTQGVWQGLFSSACSRPEVAGP*NSFACV
Trigger: TACACAAGCAAAGGAGTTGCAGGGACCAGCCACTTC...TGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCCGGTACCAGCACACGTaGATTGTGGTGTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: PIYFPLEGMLGSNKLDGPRYQHT*IVVLAR
Trigger: CCGGGCCAACACCACAATGCACGTGTGCTGGTACCG...GGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GCCCAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTAACAAGCGTGGCTTCTaGCAGACTTGTTTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: AQALVRCREHCSGLVCVFNKRGF*QTCLAV
Trigger: CACAGCTAAACAAGTCTGGCAGAAGCCACGCTTGTT...AAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp TATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCGGGGACTTTGGTTTCTaGTTCTCTAGAGGTACATGG +
Preference number: 4 (lower is better)
Translates to: YGRASFPVLALGQSSAGTGDFGF*FSRGTW
Trigger: CCATGTACCTCTAGAGAAGCAGAAACCAAAGTCCCC...GGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp ATGGTGTTATGCAGAGCTCCACACCTTGGGCGGTCACGTGGTGAACTCATGAGCTCTCACTTCCCCCAGTaGTGCCCCTGCCTATCCAAA +
Preference number: 4 (lower is better)
Translates to: MVLCRAPHLGRSRGELMSSHFPQ*CPCLSK
Trigger: TTTGGATAGGCAGGGGCAGCACTGGGGGAAGTGAGA...GCTCATGAGTTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGCATAACACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp CTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGATTGGGTAGAAGGTGGGACAGGAGCTTCATGGTGTTATaGAGAGCTCCACACCTTGGG +
Preference number: 4 (lower is better)
Translates to: LGVRSGQSLAGLGRRWDRSFMVL*RAPHLG
Trigger: CCCAAGGTGTGGAGCTCTGCATAACACCATGAAGCT...CCTGTCCCACCTTCTACCCAATCCTGCGAGACTCTGGCCACTCCTCACACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR GCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGAGAGCCCAATGCTGCTaGAGGGCACTATGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVRAQCC*RALWPQ
Trigger: CTGAGGCCATAGTGCCCTGCAGCAGCATTGGGCTCT...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp CTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCATGCAATTTCGAGCACCTaGAAATCCGACTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LRAQDSHIFPRAPDSCWHAISST*KSDSAG
Trigger: ACCTGCTGAGTCGGATTTCCAGGTGCTCGAAATTGC...ATGCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGGCTCGAACGGACGTGTaGGTCTTGCTGTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: VVVTVAQLHGVMQSSTPWARTDV*VLLCLL
Trigger: AAGAAGGCACAGCAAGACCCACACGTCCGTTCGAGC...CCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp AGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGCTCGAACGGACGTGTaGGTCTTGCTGTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RGSLSRRRHCGSASWCYAARTDV*VLLCLL
Trigger: AAGAAGGCACAGCAAGACCCACACGTCCGTTCGAGC...TGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp CGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGCGCCTCTCTGCAGCTaGACTCTTGACGTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: RRRHCGSASWCYAELHTLAPLCS*TLDVGN
Trigger: GTTTCCTACGTCAAGAGTCCAGCTGCAGAGAGGCGC...CAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTTCAGAGTCGCAGGCATaGCGTCCTCCTTCACCACTG +
Preference number: 4 (lower is better)
Translates to: SSSSLWLSFMVLCRAPHLSESQA*RPPSPL
Trigger: CAGTGGTGAAGGAGGACGCCATGCCTGCGACTCTGA...AAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CCA 90 bp AGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTAGATGGGATCGATGTTaGAGAAGAGCAGCGTCATCA +
Preference number: 4 (lower is better)
Translates to: RVLAVGTQGVWQGLFSSARWDRC*RRAASS
Trigger: TGATGACGCTGCTCTTCTCCAACATCGATCCCATCT...AGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp CCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGATATCCTGAAAGCTaGTTCTCGACAGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: PRCYMRPTHTAGASGDPVRYPES*FSTAAL
Trigger: CAGTGCAGCTGTCGAGAACCAGCTTTCAGGATATCT...CACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp ATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCTGCCATCGGCCTCCCTaGGGATGCTCACGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: IYFPLEGMLGSNKLDGPTCHRPP*GCSRCS
Trigger: GCTACAGCGTGAGCATCCCCAGGGAGGCCGATGGCA...GGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp CCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCGAGCTGCTGGCCCCCTaGATCACCTCCATCCACCTT +
Preference number: 4 (lower is better)
Translates to: PIYFPLEGMLGSNKLDGPELLAP*ITSIHL
Trigger: AAGGTGGATGGAGGTGATCCAGGGGGCCAGCAGCTC...GGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp CCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGTACGCAGGGTGTATaGCAGGGCCTCTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: PLGSPDGRSAWLCHACLRGTQGV*QGLFSS
Trigger: ACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACC...TCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp GTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCACCATCTACTTCCCGTTaGAAGGAATGCTGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: VGTQGVWQGLFSSACSRPPSTSR*KECWAV
Trigger: TACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGG...TGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp ACCTATAGTCCCTTGGGAACTCTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGAAGAGTCTCGCAGGATTaGGTAGAAGGTGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: TYSPLGTLGVRSGQSLAGRVSQD*VEGGTG
Trigger: GCCTGTCCCACCTTCTACCCAATCCTGCGAGACTCT...TCCTGCGAGACTCTGGCCACTCCTCACACCTAGAGTTCCCAAGGGACTATAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CCA 90 bp CGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGAGAGTCTCGCAGGATTaGGTAGAAGGTGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: RRRHCGSASWCYAELHTLRVSQD*VEGGTG
Trigger: GCCTGTCCCACCTTCTACCCAATCCTGCGAGACTCT...CAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CCA 90 bp CCCTTGGGAACTCTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGATTGGGTAGATCTAGGTGTGAGGAGTaGCCAGAGTCTCGCAGGATT +
Preference number: 4 (lower is better)
Translates to: PLGTLGVRSGQSLAGLGRSRCEE*PESRRI
Trigger: AATCCTGCGAGACTCTGGCCACTCCTCACACCTAGA...TCTACCCAATCCTGCGAGACTCTGGCCACTCCTCACACCTAGAGTTCCCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGAGTACCTGTCTGGGCTaGACCGAGCAGACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVSTCLG*TEQTLE
Trigger: TTCCAGGGTCTGCTCGGTCCAGCCCAGACAGGTACT...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGCTGACTCTGTGCTGCTaGAGTCCTCGGCCGTCGTGG +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQLTLCC*SPRPSW
Trigger: CCACGACGGCCGAGGACTCCAGCAGCACAGAGTCAG...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCCCCCCAGAGTCCCAGTaGGACTCTTTCTCCACTTGT +
Preference number: 4 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSPPESQ*DSFSTC
Trigger: ACAAGTGGAGAAAGAGTCCCACTGGGACTCTGGGGG...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCTGTTTACGGGTACGCTaGATGGGTGGGCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGCLRVR*MGGQGH
Trigger: GTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACA...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGGCATGGACCACCACGTaGAGAGGGAGGCTAACAGCA +
Preference number: 4 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVAWTTT*RGRLTA
Trigger: TGCTGTTAGCCTCCCTCTCCACGTGGTGGTCCATGC...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp CCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAAATACTCGTTCACTTTaGGGTGCTCTCGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: PLGSPDGRSAWLCHACLRNTRSL*GALGPA
Trigger: CGCTGGACCGAGAGCACCTCAAAGTGAACGAGTATT...TCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp CTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATCTACTAGTTGTTTCTaGGTTCTTCCACTGTATCTG +
Preference number: 4 (lower is better)
Translates to: LQGRPLGLPLGSPDGRSASTSCF*VLPLYL
Trigger: CAGATACAGTGGAAGAACTCAGAAACAACTAGTAGA...TGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp AGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCGTAAAAGGCATTCGCTaGAGATGGGGAGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SRRRHCGSASWCYAELHTVKGIR*RWGGRS
Trigger: ACTCCTGCCTCCCCATCTTCAGCGAATGCCTTTTAC...GGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCTGCAGCTGGACTCTTaGCGTAGGAAACCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: ELESSSSLWLSFMVLCRALQLDS*RRKPGD
Trigger: ATCCCCAGGTTTCCTACGTCAAGAGTCCAGCTGCAG...AGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp CCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCCTGGAGGGAGAAGGCTaGGGACTCTTCGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PIYFPLEGMLGSNKLDGPLEGEG*GLFVER
Trigger: CCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAG...GGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp TGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATAGTCCCGCTCAGGAGTGGGGATaGGCCCTGTTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: CSSSSGAISTQNSKTYSPAQEWG*ALFSWA
Trigger: GGCCCAGCTGAACAGGGCTCATCCCCACTCCTGAGC...GGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR TCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGTTTTACAAGCAGCGCTaGGCTCCCTACCGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQFYKQR*APYRPS
Trigger: GGAGGGCCGGTAGGGAGCTCAGCGCTGCTTGTAAAA...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCGCAGTGGTTTCCCCATaGCGTCCCTGGATGGACCTA +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGAVVSP*RPWMDL
Trigger: TAGGTCCATCCAGGGACGTCATGGGGAAACCACTGC...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp CCATGGCACCTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCCCCTATCTGTGGACTTaGCAAATTGAACAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: PWHLVCVYGYAGWVGRATPYLWT*QIEQCH
Trigger: ATGACACTGTTCAATTTGTCAAGTCCACAGATAGGG...GGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGACTATGGCCTCAGGCTaGATTGCTCCTGGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRTMASG*IAPGVL
Trigger: CAAAACTCCAGGAGCAATTCAGCCTGAGGCCATAGT...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TTCCGTCGAGGCAGGAAAAGGGCACCTAGGCTGAATGCAGTTCTTCAAGTGGGGCGCATCCCTGCAGTCTaGAGGACTCTGTATGTTCCT +
Preference number: 4 (lower is better)
Translates to: FRRGRKRAPRLNAVLQVGRIPAV*RTLYVP
Trigger: AGGAACATACAGAGTCCTGCAGACTGCAGGGATGCG...CCCCACTTGAAGAACTGCATTCAGCCTAGGTGCCCTTTTCCTGCCTCGACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp AGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATCGCATCCCTGCAGTCTaGAGGACTCTGTATGTTCCT +
Preference number: 4 (lower is better)
Translates to: RRGSLSRRRHCGSASWCYRIPAV*RTLYVP
Trigger: AGGAACATACAGAGTCCTGCAGACTGCAGGGATGCG...ATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp GAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACACTCTGAGGTGCAGGTaGTTCTCTTGCATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ESSSSLWLSFMVLCRAPHTLRCR*FSCILG
Trigger: GCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGT...GTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp GAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCTCGTTCACTTTGAGGTaGTCTCGGTCCAGCGTTTCA +
Preference number: 4 (lower is better)
Translates to: EGELESSSSLWLSFMVLCSFTLR*SRSSVS
Trigger: TGAAACGCTGGACCGAGAGCACCTCAAAGTGAACGA...GCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp CGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGTTCTCAAGGCAGTGCTaGTGGCCAGGCAAATACTCG +
Preference number: 4 (lower is better)
Translates to: RRRHCGSASWCYAELHTLFSRQC*WPGKYS
Trigger: CGAGTATTTGCCTGGCCAGCAGCACTGCCTTGAGAA...CAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp CCATGGCACCTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCGTGTGGGTCTTGCTGTaGCTTCTTTCATATGGAATT +
Preference number: 4 (lower is better)
Translates to: PWHLVCVYGYAGWVGRATVWVLL*LLSYGI
Trigger: AATTCCATATGAAAGAAGGCACAGCAAGACCCACAC...GGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp CTCAGCTTCCGTCGAGGCAGGAAAAGGGCACCTAGGCTGAATGCAGTTCTTCAATCCACTGCGCCTCTCTaGAGCTGGACTCTTGACGTA +
Preference number: 4 (lower is better)
Translates to: LSFRRGRKRAPRLNAVLQSTAPL*SWTLDV
Trigger: TACGTCAAGAGTCCAGCTGCAGAGAGGCGCAGTGGA...TTGAAGAACTGCATTCAGCCTAGGTGCCCTTTTCCTGCCTCGACGGAAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTTCCACTGCGCCTCTCTaGAGCTGGACTCTTGACGTA +
Preference number: 4 (lower is better)
Translates to: SSSSLWLSFMVLCRAPHLSTAPL*SWTLDV
Trigger: TACGTCAAGAGTCCAGCTGCAGAGAGGCGCAGTGGA...AAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp GGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCGATTCGTTGATGACTaGCTTTTGTGTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GTQGVWQGLFSSACSRPVRFVDD*LLCGLW
Trigger: CCAAAGCCCACACAAAAGGCAGTCATCAACGAATCG...GACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp TGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTCGATTCGTTGATGACTaGCTTTTGTGTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: WRRGSLSRRRHCGSASWCRFVDD*LLCGLW
Trigger: CCAAAGCCCACACAAAAGGCAGTCATCAACGAATCG...ACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR GCA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGACCCAGCAGGCGCTaGATCCGGCTGGCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SQICILLSISGFIRPHLSGPSRR*IRLACA
Trigger: GGCGCAGGCCAGCCGGATGCAGCGCCTGCTGGGTCC...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp CCATGGCACCTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCACAAAAATGGGAAACTaGCTGATGTGGTTAGCCACA +
Preference number: 4 (lower is better)
Translates to: PWHLVCVYGYAGWVGRATTKMGN*LMWLAT
Trigger: TGTGGCTAACCACATCAGGCAGTTTCCCATTTTTGT...GGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCGTGATGAGATACCTCTaGTGGGGTAGGGGCATGATC +
Preference number: 4 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSVMRYL*WGRGMI
Trigger: GATCATGCCCCTACCCCAGCAGAGGTATCTCATCAC...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCAAAAGCAGAGCCCAATaGTGCTGCAGGGCACTATGG +
Preference number: 4 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSKSRAQ*CCRALW
Trigger: CCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTT...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp GGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGTCAAGGCAGTGCTGCTaGCCAGGCAAATACTCGTTC +
Preference number: 4 (lower is better)
Translates to: GSLSRRRHCGSASWCYAESRQCC*PGKYSF
Trigger: GAACGAGTATTTGCCTGGCCAGCAGCACTGCCTTGA...CTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGGCGCCTCTCTGCAGCTaGACTCTTGACGTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVAPLCS*TLDVGN
Trigger: GTTTCCTACGTCAAGAGTCCAGCTGCAGAGAGGCGC...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp CTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGATTGGGTAGAAGGTGGGACAGGAGATGGGATCGATGTTaGAGAAGAGCAGCGTCATCA +
Preference number: 4 (lower is better)
Translates to: LGVRSGQSLAGLGRRWDRRWDRC*RRAASS
Trigger: TGATGACGCTGCTCTTCTCCAACATCGATCCCATCT...CCTGTCCCACCTTCTACCCAATCCTGCGAGACTCTGGCCACTCCTCACACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CCA 90 bp AGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCTTTTGTGTGGGCTTTaGAGGGCCCTTCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SLSRRRHCGSASWCYAELLLCGL*RALPRV
Trigger: CACTCTGGGAAGGGCCCTCCAAAGCCCACACAAAAG...GAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CCA 90 bp ATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCGCCCCAGATAGCTGCTaGCATGCACTAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: IYFPLEGMLGSNKLDGPTAPDSC*HALGPG
Trigger: CCCAGGACCTAGTGCATGCCAGCAGCTATCTGGGGC...GGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp CTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGACTTGGTTCACCAGATaGAAGGTCAGCATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LPLGSPDGRSAWLCHACLTWFTR*KVSMAV
Trigger: CACAGCCATGCTGACCTTCCATCTGGTGAACCAAGT...CAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp GTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCATTCTCTAGAGGTACATaGGGAACAAGCGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGTQGVWQGLFSSACSRPFSRGT*GTSVAS
Trigger: AGAAGCCACGCTTGTTCCCCATGTACCTCTAGAGAA...TGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp GAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCGCTACATGCCCTTCGTaGAGCTGGAACACCTTTAAC +
Preference number: 4 (lower is better)
Translates to: EGELESSSSLWLSFMVLCATCPS*SWNTFN
Trigger: GTTAAAGGTGTTCCAGCTCCACGAAGGGCATGTAGC...GCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CCA 90 bp CGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGTCTAGGTGTGAGGAGTaGCCAGAGTCTCGCAGGATT +
Preference number: 4 (lower is better)
Translates to: RRRHCGSASWCYAELHTLSRCEE*PESRRI
Trigger: AATCCTGCGAGACTCTGGCCACTCCTCACACCTAGA...CAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCATGAGATACCTCTGCTaGGGTAGGGGCATGATCCCA +
Preference number: 4 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSMRYLC*GRGMIP
Trigger: TGGGATCATGCCCCTACCCCAGCAGAGGTATCTCAT...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCATGGGTAAGTCCTCCTaGGAGCTACCAGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGMGKSS*ELPVQP
Trigger: GGGCTGCACTGGTAGCTCCCAGGAGGACTTACCCAT...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CAA 72 bp GTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTaGCCTTCCCTTCCGTGTCTAAATCCCCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VFLMVLKPWCPR*PSLPCLNPLWV
Trigger: CACCCAGAGGGGATTTAGACACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp GAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTAATTCTTCACCATGAGTaGAGAAAACACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: EEGELESSSSLWLSFMVLILHHE*RKHLGL
Trigger: GAGGCCGAGGTGTTTTCTTCACTCATGGTGAAGAAT...TAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTCCCCATTCTTCACCATaGGTGAAGAAAACACCTCGG +
Preference number: 4 (lower is better)
Translates to: VVVVTVAQLHGVMQSSTPPHSSP*VKKTPR
Trigger: CCGAGGTGTTTTCTTCACTCATGGTGAAGAATGGGG...AGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GTCAATGCACGACCTGCACTGTTGTCCACATGTGAACACCTGTACCGTTGCTCCCCAGCAGCTTTACTCTaGGGTGCAGGTGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VNARPALLSTCEHLYRCSPAALL*GAGASL
Trigger: AAGAGAAGCACCTGCACCTCAGAGTAAAGCTGCTGG...GGAGCAACGGTACAGGTGTTCACATGTGGACAACAGTGCAGGTCGTGCATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR TCA 90 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTAATACTCGTTCACTTTaGGGTGCTCTCGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SSSSLWLSFMVLCRAPHLNTRSL*GALGPA
Trigger: CGCTGGACCGAGAGCACCTCAAAGTGAACGAGTATT...AAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GCCACTTCCCATCTGTTGAGAAGCCTCAGGACAGAGGTCACCTCTGTGTCCTGCTGGCCCACGTGCTTCTaGTGGAATTCTAGTATCTTC +
Preference number: 4 (lower is better)
Translates to: ATSHLLRSLRTEVTSVSCWPTCF*WNSSIF
Trigger: GAAGATACTAGAATTCCATCAGAAGCACGTGGGCCA...GCAGGACACAGAGGTGACCTCTGTCCTGAGGCTTCTCAACAGATGGGAAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp GTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCACTGTCAGAAGCCATGTaGAATCTGATGCCGTACATT +
Preference number: 4 (lower is better)
Translates to: VGTQGVWQGLFSSACSRPLSEAM*NLMPYI
Trigger: AATGTACGGCATCAGATTTCACATGGCTTCTGACAG...TGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp GAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACTGGGAAACTGCCAGTTaGATCTTGGTTCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ESSSSLWLSFMVLCRAPHWETAS*ILVPSL
Trigger: CAGGGAAGGAACCAAGATTCAACTGGCAGTTTCCCA...GTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp AGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGACCACAGCCACTTGAAATCTTTTCCTCTTaGAGCTTAGTTTACGGACCT +
Preference number: 4 (lower is better)
Translates to: RPTHTAGASGDPVRPQPLEIFSS*SLVYGP
Trigger: AGGTCCGTAAACTAAGCTTCAAGAGGAAAAGATTTC...AAGTGGCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp CCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGTTAATCAAATGTGTGTaGACAAAGCAGTCGCCCATC +
Preference number: 4 (lower is better)
Translates to: PRCYMRPTHTAGASGDPVLIKCV*TKQSPI
Trigger: GATGGGCGACTGCTTTGTTCACACACATTTGATTAA...CACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp AGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATACTGTTGTCCACATGTaGACACCTGTACCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: RRGSLSRRRHCGSASWCYTVVHM*TPVPLL
Trigger: GAGCAACGGTACAGGTGTTCACATGTGGACAACAGT...ATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR TCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGGAGCTGGCCTCAGATTaGCTGGCTGAGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQELASD*LAELHV
Trigger: CACATGCAGCTCAGCCAGTCAATCTGAGGCCAGCTC...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCAGGTTGAGGCTGCAGTaGGATGTGACTGTGCCACCA +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGRLRLQ*DVTVPP
Trigger: TGGTGGCACAGTCACATCTCACTGCAGCCTCAACCT...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGCATCCCAGCCGCCTGTaGCAGAATCTTCCATACACA +
Preference number: 4 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVHPSRL*QNLPYT
Trigger: TGTGTATGGAAGATTCTGTCACAGGCGGCTGGGATG...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCAAGATGGCGCTTCCTTaGACTAGGGGACACGTCAGG +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGKMALP*TRGHVR
Trigger: CCTGACGTGTCCCCTAGTTCAAGGAAGCGCCATCTT...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp CCAGGCACGTTAAGCAAGAGTGAGACCCCTGAACAGTCAATGCACGACCTGCACTGCAGGTGCTTCTCTTaGATTCTGGGCAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: PGTLSKSETPEQSMHDLHCRCFS*ILGKRV
Trigger: GACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCA...GTGCAGGTCGTGCATTGACTGTTCAGGGGTCTCACTCTTGCTTAACGTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp GTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGCAGGTGCTTCTCTTaGATTCTGGGCAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: VVVVTVAQLHGVMQSSTPCRCFS*ILGKRV
Trigger: GACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCA...AGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp GTCAATGCACGACCTGCACTGTTGTCCACATGTGAACACCTGTACCGTTGCTCCACTCTGAGGTGCAGGTaGTTCTCTTGCATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VNARPALLSTCEHLYRCSTLRCR*FSCILG
Trigger: GCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGT...GGAGCAACGGTACAGGTGTTCACATGTGGACAACAGTGCAGGTCGTGCATTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp TATAGTCCCTTGGGAACTCTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGATTGTTCTCAAGGCAGTGCTaGTGGCCAGGCAAATACTCG +
Preference number: 4 (lower is better)
Translates to: YSPLGTLGVRSGQSLAGLFSRQC*WPGKYS
Trigger: CGAGTATTTGCCTGGCCAGCAGCACTGCCTTGAGAA...CAATCCTGCGAGACTCTGGCCACTCCTCACACCTAGAGTTCCCAAGGGACTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp GAGGGAGGGAGAACTGTTCCAGGCACGTTAAGCAAGAGTGAGACCCCTGAACAGATCTTCTCAAGGCAGTaGTGCTGGCCAGGCAAATAC +
Preference number: 4 (lower is better)
Translates to: EGGRTVPGTLSKSETPEQIFSRQ*CWPGKY
Trigger: GTATTTGCCTGGCCAGCAGCACTGCCTTGAGAAGAT...CTGTTCAGGGGTCTCACTCTTGCTTAACGTGCCTGGAACAGTTCTCCCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp GTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTATCTTCTCAAGGCAGTaGTGCTGGCCAGGCAAATAC +
Preference number: 4 (lower is better)
Translates to: VVVVTVAQLHGVMQSSTPIFSRQ*CWPGKY
Trigger: GTATTTGCCTGGCCAGCAGCACTGCCTTGAGAAGAT...AGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp ACCTATAGTCCCTTGGGAACTCTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGACGGACGTGTGGGTCTTaGTGTGCCTTCTTTCATATG +
Preference number: 4 (lower is better)
Translates to: TYSPLGTLGVRSGQSLAGRTCGS*CAFFHM
Trigger: CATATGAAAGAAGGCACAGCAAGACCCACACGTCCG...TCCTGCGAGACTCTGGCCACTCCTCACACCTAGAGTTCCCAAGGGACTATAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCAGGGGCCTCCAGCCACTaGTCCACTGCGCCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASGASSH*STAPLC
Trigger: GCAGAGAGGCGCAGTGGAGCAGTGGCTGGAGGCCCC...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp GAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTACGATTCGTTGATGACTaGCTTTTGTGTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: EEGELESSSSLWLSFMVLRFVDD*LLCGLW
Trigger: CCAAAGCCCACACAAAAGGCAGTCATCAACGAATCG...TAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR GCA 90 bp CAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACCACCCACACTGCTGGTaGCAGTGGGGATCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QSPIYFPLEGMLGSNKLDHPHCW*QWGSSE
Trigger: CTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTG...GTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp CTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAACAAGCGTGGCTTCTaGCAGACTTGTTTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LPLGSPDGRSAWLCHACLNKRGF*QTCLAV
Trigger: CACAGCTAAACAAGTCTGGCAGAAGCCACGCTTGTT...CAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp GTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTCATTTTTGTGACCCCTaGTACATGCCCTTCGTGGAG +
Preference number: 4 (lower is better)
Translates to: VVVVTVAQLHGVMQSSTPHFCDP*YMPFVE
Trigger: CTCCACGAAGGGCATGTAGCAGGGGTCACAAAAATG...AGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp GTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTAGCTTCATGGTGTTATaGAGAGCTCCACACCTTGGG +
Preference number: 4 (lower is better)
Translates to: VVVVTVAQLHGVMQSSTPSFMVL*RAPHLG
Trigger: CCCAAGGTGTGGAGCTCTGCATAACACCATGAAGCT...AGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR GCA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCCCACCTTGGCACACCTaGCCCTGGGACCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: THNSWEHTCYVCHHVITTPPWHT*PWDPSH
Trigger: ATGGGAAGGGTCCCAGGGGCAGGTGTGCCAAGGTGG...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCCCAGCCCTTGCAAGATaGCCTCAATGGCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGPALAR*PQWLRH
Trigger: GTGTCTGAGCCATTGAGGGCATCTTGCAAGGGCTGG...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGACACCTCTCAGGCTGTaGACTACCCAACACTGGCTT +
Preference number: 4 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVTPLRL*TTQHWL
Trigger: AAGCCAGTGTTGGGTAGTGCACAGCCTGAGAGGTGT...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp CCATGGCACCTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCGAACTGTTAATATTTTaGAGGCACTTTCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: PWHLVCVYGYAGWVGRATELLIF*RHFHLH
Trigger: GTGGAGGTGAAAGTGCCTGCAAAATATTAACAGTTC...GGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGCTCATTGACGGGGACTaGTGCAGGATTGCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQLIDGD*CRIASP
Trigger: AGGGGACGCAATCCTGCAGCAGTCCCCGTCAATGAG...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCGCTTCTCTTGCATTCTaGGCAAGAGAGTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SLSRRRHCGSASWCYAELASLAF*ARESAQ
Trigger: CTGGGCAGACTCTCTTGCCCAGAATGCAAGAGAAGC...GAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp AGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCTCAAGGCAGTGCTGCTaGCCAGGCAAATACTCGTTC +
Preference number: 4 (lower is better)
Translates to: SLSRRRHCGSASWCYAELSRQCC*PGKYSF
Trigger: GAACGAGTATTTGCCTGGCCAGCAGCACTGCCTTGA...GAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp GGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAATTTTGGTGGTGCCCTaGAACACGAGTACACCCATG +
Preference number: 4 (lower is better)
Translates to: GELESSSSLWLSFMVLCRILVVP*NTSTPM
Trigger: CATGGGTGTACTCGTGTTCCAGGGCACCACCAAAAT...TCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp AGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGAGTAAACTCCTTTAACTaGCGCATGTTCCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RCYMRPTHTAGASGDPVRVNSFN*RMFLSR
Trigger: CCTGCTCAGGAACATGCGCCAGTTAAAGGAGTTTAC...TCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp ATGGTGTTATGCAGAGCTCCACACCTTGGGCGGTCACGTGGTGAACTCATGAGCTGGAACACCTTTAACTaGCGCATGTTCCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: MVLCRAPHLGRSRGELMSWNTFN*RMFLSR
Trigger: CCTGCTCAGGAACATGCGCCAGTTAAAGGTGTTCCA...GCTCATGAGTTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGCATAACACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CCA 90 bp GGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGATCGTCGTCGTCACTGTaGCTCAGCTTCATGGTGTTA +
Preference number: 4 (lower is better)
Translates to: GELESSSSLWLSFMVLCRSSSSL*LSFMVL
Trigger: TAACACCATGAAGCTGAGCCACAGTGACGACGACGA...TCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGGGACCGAGCAGACCCTaGAAGCTCACACAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQGPSRP*KLTQRR
Trigger: CCTCCTTTGTGTGAGCTTCCAGGGTCTGCTCGGTCC...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGTATCTACTGCCTCCATaGAGTACCTGTCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVYLLPP*STCLGW
Trigger: CCAGCCCAGACAGGTACTCCATGGAGGCAGTAGATA...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCATGATGTCAGAGAACTaGAAGGCCGAGCTGGACTCA +
Preference number: 4 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSMMSEN*KAELDS
Trigger: TGAGTCCAGCTCGGCCTTCCAGTTCTCTGACATCAT...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCACCCAGCAGGGCCCATaGCACCTGGTATGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGTQQGP*HLVCVY
Trigger: GTAAACACATACCAGGTGCCATGGGCCCTGCTGGGT...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGCCACAAAACCCCTGCTaGCATCCAGCCAACACTGAT +
Preference number: 4 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVPQNPC*HPANTD
Trigger: ATCAGTGTTGGCTGGATGCCAGCAGGGGTTTTGTGG...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGCAGCTGGGGCAAGCATaGTCAAGTGTGGGTAACACT +
Preference number: 4 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVQLGQA*SSVGNT
Trigger: AGTGTTACCCACACTTGACCATGCTTGCCCCAGCTG...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGACAGGCACTGTCTGCTaGTGGCCTCTCATTGACGGG +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQTGTVC*WPLIDG
Trigger: CCCGTCAATGAGAGGCCACCAGCAGACAGTGCCTGT...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCTACTCCTCAGAGCGGTaGAATGGCAGAGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGYSSER*NGRGAC
Trigger: GCAAGCTCCTCTGCCATTCCACCGCTCTGAGGAGTA...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGGGGACACGTCAGGCATaGACCACCACGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVGTRQA*TTTWRG
Trigger: CCCTCTCCACGTGGTGGTCCATGCCTGACGTGTCCC...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp ATGGTGTTATGCAGAGCTCCACACCTTGGGCGGTCACGTGGTGAACTCATGAGCATTCTTCACCATGAGTaGAGAAAACACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: MVLCRAPHLGRSRGELMSILHHE*RKHLGL
Trigger: GAGGCCGAGGTGTTTTCTTCACTCATGGTGAAGAAT...GCTCATGAGTTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGCATAACACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR TCA 90 bp TTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCACCCCATTCTTCACCATaGGTGAAGAAAACACCTCGG +
Preference number: 4 (lower is better)
Translates to: FPLEGMLGSNKLDGPTLPPHSSP*VKKTPR
Trigger: CCGAGGTGTTTTCTTCACTCATGGTGAAGAATGGGG...TGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp TGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATTCTTCTTGTAGCTaGCCAGGATCAGGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: WRRGSLSRRRHCGSASWCYSSCS*PGSGGK
Trigger: TTTTCCACCTGATCCTGGTCAGCTACAAGAAGAATA...ACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGATGGCCCACGTGCTTCTaGTGGAATTCTAGTATCTTC +
Preference number: 4 (lower is better)
Translates to: GELESSSSLWLSFMVLCRWPTCF*WNSSIF
Trigger: GAAGATACTAGAATTCCATCAGAAGCACGTGGGCCA...TCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp CGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGTGGCCCACGTGCTTCTaGTGGAATTCTAGTATCTTC +
Preference number: 4 (lower is better)
Translates to: RRRHCGSASWCYAELHTLWPTCF*WNSSIF
Trigger: GAAGATACTAGAATTCCATCAGAAGCACGTGGGCCA...CAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp CAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGAAGCCATGTGAAATCTaGTGCCGTACATTTCCAACT +
Preference number: 4 (lower is better)
Translates to: QALVRCREHCSGLVCVFEKPCEI*CRTFPT
Trigger: AGTTGGAAATGTACGGCATCAGATTTCACATGGCTT...CTCAAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp CCACATGTGAACACCTGTACCGTTGCTCCTATTGAAGAGAAATCTCACTTCCCCAGGAGGAGCCCCGGCTaGAGAAGACGGCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: PHVNTCTVAPIEEKSHFPRRSPG*RRRLLL
Trigger: AAGCAAAAGCCGTCTTCTTCAGCCGGGGCTCCTCCT...GGGGAAGTGAGATTTCTCTTCAATAGGAGCAACGGTACAGGTGTTCACATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR TCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGCTGCAGCTGGACTCTTaGCGTAGGAAACCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQLQLDS*RRKPGD
Trigger: ATCCCCAGGTTTCCTACGTCAAGAGTCCAGCTGCAG...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TTATGCAGAGCTCCACACCTTGGGCGGTCACGTGGTGAACTCATGAGCAGCCTGTACCGTTGCTCCTATTaGAGAGAAATCTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: LCRAPHLGRSRGELMSSLYRCSY*REISLP
Trigger: GGGAAGTGAGATTTCTCTTCAATAGGAGCAACGGTA...CAGGCTGCTCATGAGTTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR TCA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGCAACAGGGCTCATCTTaGAAAGCAGCATCAATAGTG +
Preference number: 4 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRQQGSS*KAASIV
Trigger: CACTATTGATGCTGCTTTTCAAGATGAGCCCTGTTG...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCAATGGCTCAGACACCTaGGCCACGTGGTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: THNSWEHTCYVCHHVITTNGSDT*ATWSLC
Trigger: GCACAGGGACCACGTGGCTCAGGTGTCTGAGCCATT...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCGGGGTAAGAGGGCTGTaGGCAGTAACTCGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGGVRGL*AVTRKK
Trigger: TTTCTTCCGAGTTACTGCTCACAGCCCTCTTACCCC...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGCAACCACAGCACATGTaGAGTGCTACAATTACTCCT +
Preference number: 4 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRQPQHM*SATITP
Trigger: AGGAGTAATTGTAGCACTTCACATGTGCTGTGGTTG...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp CCATGGCACCTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCACGATTCTGTGGACTTaGGAACCAAATCTATACAAA +
Preference number: 4 (lower is better)
Translates to: PWHLVCVYGYAGWVGRATTILWT*EPNLYK
Trigger: TTTGTATAGATTTGGTTCTCAAGTCCACAGAATCGT...GGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp CTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGCTCTGGGGTTTGGCCTTCGTATTTaGCTAATGATGGGTTTCATA +
Preference number: 4 (lower is better)
Translates to: LFSSACSRPVLGRDPALGFGLRI*LMMGFI
Trigger: TATGAAACCCATCATTAGGCAAATACGAAGGCCAAA...CCCCAGAGCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp ATGGTGTTATGCAGAGCTCCACACCTTGGGCGGTCACGTGGTGAACTCATGAGCACCCATGTGGGAAACTaGCAGTTGAATCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: MVLCRAPHLGRSRGELMSTHVGN*QLNLGS
Trigger: GGAACCAAGATTCAACTGGCAGTTTCCCACATGGGT...GCTCATGAGTTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGCATAACACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp GTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGACCCATGTGGGAAACTaGCAGTTGAATCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: VVVTVAQLHGVMQSSTPWTHVGN*QLNLGS
Trigger: GGAACCAAGATTCAACTGGCAGTTTCCCACATGGGT...CCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp TGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTGTGTGGGTCTTGCTGTaGCTTCTTTCATATGGAATT +
Preference number: 4 (lower is better)
Translates to: WRRGSLSRRRHCGSASWCVWVLL*LLSYGI
Trigger: AATTCCATATGAAAGAAGGCACAGCAAGACCCACAC...ACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp GAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCGGACGTGTGGGTCTTaGTGTGCCTTCTTTCATATG +
Preference number: 4 (lower is better)
Translates to: ELESSSSLWLSFMVLCRARTCGS*CAFFHM
Trigger: CATATGAAAGAAGGCACAGCAAGACCCACACGTCCG...AGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp GCTGAATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATCAGAGTGCCAGCCTCTaGTCCACCTCGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AECSSSSGAISTQNSKTYQSASL*STSRRK
Trigger: CTTCCTGCGCGAGGTGGAGCAGAGGCTGGCACTCTG...ATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR GCA 90 bp CCAGGCACGTTAAGCAAGAGTGAGACCCCTGAACAGTCAATGCACGACCTGCACCGATTCGTTGATGACTaGCTTTTGTGTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PGTLSKSETPEQSMHDLHRFVDD*LLCGLW
Trigger: CCAAAGCCCACACAAAAGGCAGTCATCAACGAATCG...GTGCAGGTCGTGCATTGACTGTTCAGGGGTCTCACTCTTGCTTAACGTGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp GGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCTTTCAAATGTGTACTTaGTCTCAGCCCGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: GTQGVWQGLFSSACSRPVFQMCT*SQPGRS
Trigger: ACTTCTTCCGGGCTGAGAGCAAGTACACATTTGAAA...GACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp AGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCAGCTTCATGGTGTTATaGAGAGCTCCACACCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLSRRRHCGSASWCYAELSFMVL*RAPHLG
Trigger: CCCAAGGTGTGGAGCTCTGCATAACACCATGAAGCT...GAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR GCA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGTGTGTTCATATCTACTaGCTCCATGGAGTACCTGTC +
Preference number: 4 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRCVHIY*LHGVPV
Trigger: GACAGGTACTCCATGGAGGCAGTAGATATGAACACA...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGGAGGCTAACAGCATCTaGCCACATCCCAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVEANSI*PHPSRL
Trigger: CAGGCGGCTGGGATGTGGGCAGATGCTGTTAGCCTC...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp CTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGTGTGTCAGTAATACCTaGCCATCGCATTTAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPLGSPDGRSAWLCHACLCVSNT*PSHLGS
Trigger: TGAGCCTAAATGCGATGGCCAGGTATTACTGACACA...CAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTAAGCACCACATTCTTTaGCCTTCGTATTTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: ERVLAVGTQGVWQGLFSSKHHIL*PSYLPN
Trigger: ATTAGGCAAATACGAAGGCCAAAGAATGTGGTGCTT...ACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp AGGCTGAATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTTCCGACTGCAGGAGATaGGACGTGAGAAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: RLNAVLQVGLSQHRTAKPSDCRR*DVRRAA
Trigger: AGCGGCCCTTCTCACGTCCCATCTCCTGCAGTCGGA...AGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CCA 90 bp CTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCAGCAATTTCGAGCACCTaGAAATCCGACTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LESSSSLWLSFMVLCRAPAISST*KSDSAG
Trigger: ACCTGCTGAGTCGGATTTCCAGGTGCTCGAAATTGC...TGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGGCTCGAACGGACGTGTaGGTCTTGCTGTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQARTDV*VLLCLL
Trigger: AAGAAGGCACAGCAAGACCCACACGTCCGTTCGAGC...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGCAGAGGGGACCAGAGTaGAGGGAGAGAGCGAGTAAA +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQQRGPE*RERASK
Trigger: TTTACTCGCTCTCTCCCTCCACTCTGGTCCCCTCTG...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp ATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCGCGCCTCTCTGCAGCTaGACTCTTGACGTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: IYFPLEGMLGSNKLDGPTAPLCS*TLDVGN
Trigger: GTTTCCTACGTCAAGAGTCCAGCTGCAGAGAGGCGC...GGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp CTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGGATGGTGAAACAGTGTaGAACAGACCACTCGTTATC +
Preference number: 4 (lower is better)
Translates to: LGSPDGRSAWLCHACLRGDGETV*NRPLVI
Trigger: GATAACGAGTGGTCTGTTCCACACTGTTTCACCATC...CCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp GTGTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCACATGGGGAACAAGCGTaGCTTCTGCCAGACTTGTTT +
Preference number: 4 (lower is better)
Translates to: VCEQSSRPSTSRWKECWAHGEQA*LLPDLF
Trigger: AAACAAGTCTGGCAGAAGCCACGCTTGTTCCCCATG...TGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp TTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACTCGTCGTCGTCACTGTaGCTCAGCTTCATGGTGTTA +
Preference number: 4 (lower is better)
Translates to: LSRRRHCGSASWCYAELHSSSSL*LSFMVL
Trigger: TAACACCATGAAGCTGAGCCACAGTGACGACGACGA...GTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CCA 90 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTTCGTCGTCGTCACTGTaGCTCAGCTTCATGGTGTTA +
Preference number: 4 (lower is better)
Translates to: SSSSLWLSFMVLCRAPHLSSSSL*LSFMVL
Trigger: TAACACCATGAAGCTGAGCCACAGTGACGACGACGA...AAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CCA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGCACCATACTCCAGCCTaGGTGACAGGAGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVHHTPA*VTGVRP
Trigger: GGGCCTCACTCCTGTCACCCAGGCTGGAGTATGGTG...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGAATCTTCCATACACATaGCTCCCAGATGAGCACCAA +
Preference number: 4 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRNLPYT*LPDEHQ
Trigger: TTGGTGCTCATCTGGGAGCCATGTGTATGGAAGATT...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp AGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGATATTCTTCTTGTAGCTaGCCAGGATCAGGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RCYMRPTHTAGASGDPVRYSSCS*PGSGGK
Trigger: TTTTCCACCTGATCCTGGTCAGCTACAAGAAGAATA...TCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp CGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGCTGTCAGAAGCCATGTaGAATCTGATGCCGTACATT +
Preference number: 4 (lower is better)
Translates to: RRRHCGSASWCYAELHTLLSEAM*NLMPYI
Trigger: AATGTACGGCATCAGATTTCACATGGCTTCTGACAG...CAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGAGGAGGAGCCCCGGCTaGAGAAGACGGCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVRRSPG*RRRLLL
Trigger: AAGCAAAAGCCGTCTTCTTCAGCCGGGGCTCCTCCT...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGGTAAAAGGCATTCGCTaGAGATGGGGAGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQVKGIR*RWGGRS
Trigger: ACTCCTGCCTCCCCATCTTCAGCGAATGCCTTTTAC...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGAAACCTGGGGATCTGTaGGGGAGCTGCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVKPGDL*GSCCCP
Trigger: AGGACAGCAGCAGCTCCCTCACAGATCCCCAGGTTT...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp GCCCAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTAGCCATGACTGTTTTTaGACTTTCTTAGCAGATATC +
Preference number: 4 (lower is better)
Translates to: AQALVRCREHCSGLVCVFSHDCF*TFLADI
Trigger: GATATCTGCTAAGAAAGTTCAAAAACAGTCATGGCT...AAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR TCA 90 bp CTCAGCTTCCGTCGAGGCAGGAAAAGGGCACCTAGGCTGAATGCAGTTCTTCAATCTACTCCATTTTTGTaGCCCCTGCTACATGCCCTT +
Preference number: 4 (lower is better)
Translates to: LSFRRGRKRAPRLNAVLQSTPFL*PLLHAL
Trigger: AAGGGCATGTAGCAGGGGTCACAAAAATGGAGTAGA...TTGAAGAACTGCATTCAGCCTAGGTGCCCTTTTCCTGCCTCGACGGAAGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR TCA 90 bp GCTGAATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATTGGGCGGTCACGTGGTaGACTCATGAGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AECSSSSGAISTQNSKTYWAVTW*THEQPE
Trigger: CTCAGGCTGCTCATGAGTTCACCACGTGACCGCCCA...ATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR TCA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCAGAGTCCCACGAGTTTaGCCACAGCACACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: THNSWEHTCYVCHHVITTRVPRV*PQHTGG
Trigger: GCCTCCTGTGTGCTGTGGTCAAACTCGTGGGACTCT...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGCACAAACATCAGCCTTaGCTTTTATGGTGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLHKHQP*LLWWFR
Trigger: TCTAAACCACCATAAAAGTCAAGGCTGATGTTTGTG...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCTTAGAATCTCGCACATaGGCGAGTGATGAGATACCT +
Preference number: 4 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSLESRT*ASDEIP
Trigger: AGGTATCTCATCACTCGCTCATGTGCGAGATTCTAA...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TTCTGCTTCTCTAGAGGTACATGGGGAACAAGCGTGGCTTCTGCCAGACTTGTTACTCTGAGGTGCAGGTaGTTCTCTTGCATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FCFSRGTWGTSVASARLVTLRCR*FSCILG
Trigger: GCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGT...AACAAGTCTGGCAGAAGCCACGCTTGTTCCCCATGTACCTCTAGAGAAGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp GGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGAAGAAGACGGCTTTTaGTTTTGGCTTAGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: GELESSSSLWLSFMVLCREEDGF*FWLRLV
Trigger: GACCAACCTAAGCCAAAAGCAAAAGCCGTCTTCTTC...TCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp AGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCGAAGAAGACGGCTTTTaGTTTTGGCTTAGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SRRRHCGSASWCYAELHTEEDGF*FWLRLV
Trigger: GACCAACCTAAGCCAAAAGCAAAAGCCGTCTTCTTC...GGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp GCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGTGTGGGTCTTGCTGTaGCTTCTTTCATATGGAATT +
Preference number: 4 (lower is better)
Translates to: AATWFTRWKVSMAVPRLSVWVLL*LLSYGI
Trigger: AATTCCATATGAAAGAAGGCACAGCAAGACCCACAC...AGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp TGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATAGTCCCGAAGTAGGCCTCGTCTaGAGGCACGCGCTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: CSSSSGAISTQNSKTYSPEVGLV*RHALVS
Trigger: AGACACAAGCGCGTGCCTGCAGACGAGGCCTACTTC...GGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGACTTTCCTCCTCAAATaGAAAACCGTCTTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLTFLLK*KTVFCV
Trigger: AACACAGAAGACGGTTTTGCATTTGAGGAGGAAAGT...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGGTTCTAAAGCCATGGTaGCCACGCTTGCCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQVLKPW*PRLPSL
Trigger: AAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAAC...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGAAAGAGCAACGTCAGTaGCTCATTAACTGTTACAAG +
Preference number: 4 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLKEQRQ*LINCYK
Trigger: CTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTT...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCATGTGTCAGTAATACCTaGCCATCGCATTTAGGCTCA +
Preference number: 4 (lower is better)
Translates to: RGSLSRRRHCGSASWCYACVSNT*PSHLGS
Trigger: TGAGCCTAAATGCGATGGCCAGGTATTACTGACACA...TGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp GGGGCTATCTCAACACAGAACAGCAAAACCTATAGTCCCTTGGGAACTCTAGGTCAGAGGGGACCAGAGTaGAGGGAGAGAGCGAGTAAA +
Preference number: 4 (lower is better)
Translates to: GAISTQNSKTYSPLGTLGQRGPE*RERASK
Trigger: TTTACTCGCTCTCTCCCTCCACTCTGGTCCCCTCTG...ACCTAGAGTTCCCAAGGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CCA 90 bp AGCTTCCGTCGAGGCAGGAAAAGGGCACCTAGGCTGAATGCAGTTCTTCAAGTGAGATGGGATCGATGTTaGAGAAGAGCAGCGTCATCA +
Preference number: 4 (lower is better)
Translates to: SFRRGRKRAPRLNAVLQVRWDRC*RRAASS
Trigger: TGATGACGCTGCTCTTCTCCAACATCGATCCCATCT...CACTTGAAGAACTGCATTCAGCCTAGGTGCCCTTTTCCTGCCTCGACGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CCA 90 bp AGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCAGATGGGATCGATGTTaGAGAAGAGCAGCGTCATCA +
Preference number: 4 (lower is better)
Translates to: SLSRRRHCGSASWCYAELRWDRC*RRAASS
Trigger: TGATGACGCTGCTCTTCTCCAACATCGATCCCATCT...GAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CCA 90 bp CCACATGTGAACACCTGTACCGTTGCTCCTATTGAAGAGAAATCTCACTTCCCCTGCCCTTCGTGGAGCTaGAACACCTTTAACTGGCGC +
Preference number: 4 (lower is better)
Translates to: PHVNTCTVAPIEEKSHFPCPSWS*NTFNWR
Trigger: GCGCCAGTTAAAGGTGTTCCAGCTCCACGAAGGGCA...GGGGAAGTGAGATTTCTCTTCAATAGGAGCAACGGTACAGGTGTTCACATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGGAAGGAGATGTCTGCTaGGTCATCGTCTATGAACTC +
Preference number: 4 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVEGDVC*VIVYEL
Trigger: GAGTTCATAGACGATGACCCAGCAGACATCTCCTTC...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGGGCCTGAGATTCCTGTaGGACTACAGAGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQGLRFL*DYRAIR
Trigger: CCTTATGGCTCTGTAGTCCCACAGGAATCTCAGGCC...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGCTGAGCTGCTCTAACTaGTCGATGATGTCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVLSCSN*SMMSEN
Trigger: GTTCTCTGACATCATCGACCAGTTAGAGCAGCTCAG...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp GAGGGAGGGAGAACTGTTCCAGGCACGTTAAGCAAGAGTGAGACCCCTGAACAGTATTCTTCTTGTAGCTaGCCAGGATCAGGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: EGGRTVPGTLSKSETPEQYSSCS*PGSGGK
Trigger: TTTTCCACCTGATCCTGGTCAGCTACAAGAAGAATA...CTGTTCAGGGGTCTCACTCTTGCTTAACGTGCCTGGAACAGTTCTCCCTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR TCA 90 bp CGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGAAGCCATGTGAAATCTaGTGCCGTACATTTCCAACT +
Preference number: 4 (lower is better)
Translates to: RRRHCGSASWCYAELHTLKPCEI*CRTFPT
Trigger: AGTTGGAAATGTACGGCATCAGATTTCACATGGCTT...CAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp TTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACCTGTCAGAAGCCATGTaGAATCTGATGCCGTACATT +
Preference number: 4 (lower is better)
Translates to: LSRRRHCGSASWCYAELHLSEAM*NLMPYI
Trigger: AATGTACGGCATCAGATTTCACATGGCTTCTGACAG...GTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCAGCTGGGGTAGGGGCATaGTCCCACTCCTTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASAGVGA*SHSLGR
Trigger: CCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGC...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp GCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATAGTCCCTTGGGCGGTCACGTGGTaGACTCATGAGCAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: AVLQVGLSQHRTAKPIVPWAVTW*THEQPL
Trigger: TAAAGGCTGCTCATGAGTTCACCACGTGACCGCCCA...AGGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422951.1
CDS-3UTR GCA 90 bp TGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTTTGGCCTTCGTATTTaGCTAATGATGGGTTTCATA +
Preference number: 4 (lower is better)
Translates to: WRRGSLSRRRHCGSASWCFGLRI*LMMGFI
Trigger: TATGAAACCCATCATTAGGCAAATACGAAGGCCAAA...ACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp TTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGAAGAAGACGGCTTTTaGTTTTGGCTTAGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: FPLEGMLGSNKLDGPTLPEEDGF*FWLRLV
Trigger: GACCAACCTAAGCCAAAAGCAAAAGCCGTCTTCTTC...TGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCTCCACTGCGCCTCTCTaGAGCTGGACTCTTGACGTA +
Preference number: 4 (lower is better)
Translates to: THNSWEHTCYVCHHVITTSTAPL*SWTLDV
Trigger: TACGTCAAGAGTCCAGCTGCAGAGAGGCGCAGTGGA...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp ACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGTTTCAAATGTGTACTTaGTCTCAGCCCGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: TWFTRWKVSMAVPRLSERFQMCT*SQPGRS
Trigger: ACTTCTTCCGGGCTGAGAGCAAGTACACATTTGAAA...CCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR GCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGGCCACGTGGTCCCTGTaGAATCACAGTAAATCCATC +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQATWSL*NHSKSI
Trigger: GATGGATTTACTGTGATTGCACAGGGACCACGTGGC...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACTGTGTCAGTAATACCTaGCCATCGCATTTAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LSRRRHCGSASWCYAELHCVSNT*PSHLGS
Trigger: TGAGCCTAAATGCGATGGCCAGGTATTACTGACACA...GTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp GAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAAGCACCACATTCTTTaGCCTTCGTATTTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: EGELESSSSLWLSFMVLCKHHIL*PSYLPN
Trigger: ATTAGGCAAATACGAAGGCCAAAGAATGTGGTGCTT...GCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp CTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGTCCATGAACCTCTaGATGAAGTTTGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: LAVGTQGVWQGLFSSACSRSMNL*MKFDKK
Trigger: TTTCTTATCAAACTTCATCCAGAGGTTCATGGACCT...AGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CCA 90 bp TGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTAGGTCCATGAACCTCTaGATGAAGTTTGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: WRRGSLSRRRHCGSASWCRSMNL*MKFDKK
Trigger: TTTCTTATCAAACTTCATCCAGAGGTTCATGGACCT...ACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CCA 90 bp TCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCATCTACTTCCCGTTaGAAGGAATGCTGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: SPIYFPLEGMLGSNKLDGPSTSR*KECWAV
Trigger: TACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGG...GCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCACATGGAGTACCTGTCTaGGCTGGACCGAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASHGVPV*AGPSRP
Trigger: GGGTCTGCTCGGTCCAGCCCAGACAGGTACTCCATG...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCAAGCATGGTCAAGTGTaGGTAACACTGAATTTGAGG +
Preference number: 4 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSKHGQV*VTLNLR
Trigger: CCTCAAATTCAGTGTTACCCACACTTGACCATGCTT...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCAGGCACTGTCTGCTGGTaGCCTCTCATTGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASGTVCW*PLIDGD
Trigger: GTCCCCGTCAATGAGAGGCCACCAGCAGACAGTGCC...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
3UTR CAA 72 bp GCTATCTCAACACAGAACAGCAAAACCTATAGTCCCTaGGGAACTCTAGGTGTGAGGAGTGGCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: AISTQNSKTYSP*GTLGVRSGQSL
Trigger: GAGACTCTGGCCACTCCTCACACCTAGAGTTCCCAAGGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR TCA 90 bp AGGCTGAATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTAATACTCGTTCACTTTaGGGTGCTCTCGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: RLNAVLQVGLSQHRTAKPNTRSL*GALGPA
Trigger: CGCTGGACCGAGAGCACCTCAAAGTGAACGAGTATT...AGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR TCA 90 bp CTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCAAAGCCATGTGAAATCTaGTGCCGTACATTTCCAACT +
Preference number: 4 (lower is better)
Translates to: LESSSSLWLSFMVLCRAPKPCEI*CRTFPT
Trigger: AGTTGGAAATGTACGGCATCAGATTTCACATGGCTT...TGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GGGGCTATCTCAACACAGAACAGCAAAACCTATAGTCCCTTGGGAACTCTAGGTTGGGAAACTGCCAGTTaGATCTTGGTTCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: GAISTQNSKTYSPLGTLGWETAS*ILVPSL
Trigger: CAGGGAAGGAACCAAGATTCAACTGGCAGTTTCCCA...ACCTAGAGTTCCCAAGGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR TCA 90 bp GGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGAAATCTTTTCCTCTTaGAGCTTAGTTTACGGACCT +
Preference number: 4 (lower is better)
Translates to: GELESSSSLWLSFMVLCREIFSS*SLVYGP
Trigger: AGGTCCGTAAACTAAGCTTCAAGAGGAAAAGATTTC...TCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp GTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGTCTACTAGTTGTTTCTaGGTTCTTCCACTGTATCTG +
Preference number: 4 (lower is better)
Translates to: VVVTVAQLHGVMQSSTPWSTSCF*VLPLYL
Trigger: CAGATACAGTGGAAGAACTCAGAAACAACTAGTAGA...CCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCAGGACTCAGAGCGGACTaGGTAGGCTGGGAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASGLRAD*VGWEVD
Trigger: GTCAACTTCCCAGCCTACTCAGTCCGCTCTGAGTCC...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCGTGGACTTGACAAATTaGACAGTGTCATCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGVDLTN*TVSSRA
Trigger: AGCCCTAGATGACACTGTTCAATTTGTCAAGTCCAC...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCACACATGGCTCCCAGATaGGCACCAAAGGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASHMAPR*APKGDH
Trigger: GTGGTCTCCCTTTGGTGCTCATCTGGGAGCCATGTG...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp CAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACCGGACGTGTGGGTCTTaGTGTGCCTTCTTTCATATG +
Preference number: 4 (lower is better)
Translates to: QSPIYFPLEGMLGSNKLDRTCGS*CAFFHM
Trigger: CATATGAAAGAAGGCACAGCAAGACCCACACGTCCG...GTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR GCA 90 bp AGGCTGAATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTCCCCTGAACAGTCAATaGACGACCTGCACTGTTGTC +
Preference number: 4 (lower is better)
Translates to: RLNAVLQVGLSQHRTAKPPLNSQ*TTCTVV
Trigger: GACAACAGTGCAGGTCGTGCATTGACTGTTCAGGGG...AGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCAAGGCACTGAAACTCTaGCCCCCAGCACAGACAGAA +
Preference number: 4 (lower is better)
Translates to: THNSWEHTCYVCHHVITTKALKL*PPAQTE
Trigger: TTCTGTCTGTGCTGGGGGGCAGAGTTTCAGTGCCTT...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGGGGTTTTTATCTATTTaGTCTCCTGGAGTCAAATTC +
Preference number: 4 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRGFLSI*SPGVKF
Trigger: GAATTTGACTCCAGGAGAGCAAATAGATAAAAACCC...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp CCACATGTGAACACCTGTACCGTTGCTCCTATTGAAGAGAAATCTCACTTCCCCGCAATTTCGAGCACCTaGAAATCCGACTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PHVNTCTVAPIEEKSHFPAISST*KSDSAG
Trigger: ACCTGCTGAGTCGGATTTCCAGGTGCTCGAAATTGC...GGGGAAGTGAGATTTCTCTTCAATAGGAGCAACGGTACAGGTGTTCACATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCAACTGGAAGGCCGAGCTaGACTCAGAGCGGACTGAGT +
Preference number: 4 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASTGRPS*TQSGLS
Trigger: ACTCAGTCCGCTCTGAGTCCAGCTCGGCCTTCCAGT...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCACATGACGTCCCTGGATaGACCTACCCACTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASHDVPG*TYPLCA
Trigger: GGCACAGAGTGGGTAGGTCCATCCAGGGACGTCATG...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGGAAAGCTGTGCCCAATaGCCCCTAAAGCATCAAGAA +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQESCAQ*PLKHQE
Trigger: TTCTTGATGCTTTAGGGGCCATTGGGCACAGCTTTC...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCATGGTTCTAAAGCCATaGTGCCCACGCTTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: THNSWEHTCYVCHHVITTMVLKP*CPRLPS
Trigger: GGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCAT...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTTCTACTAGTTGTTTCTaGGTTCTTCCACTGTATCTG +
Preference number: 4 (lower is better)
Translates to: SSSSLWLSFMVLCRAPHLSTSCF*VLPLYL
Trigger: CAGATACAGTGGAAGAACTCAGAAACAACTAGTAGA...AAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR TCA 90 bp AGGCTGAATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTTTCTCATTAACAACCTaGCTCAGCTTCCGTCGAGGC +
Preference number: 4 (lower is better)
Translates to: RLNAVLQVGLSQHRTAKPFSLTT*LSFRRG
Trigger: GCCTCGACGGAAGCTGAGTCAGGTTGTTAATGAGAA...AGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR TCA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCGGTGTGCGTTCCCATTaGAGTCACTTTCCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: THNSWEHTCYVCHHVITTGVRSH*SHFPPQ
Trigger: TTGAGGAGGAAAGTGACTTCAATGGGAACGCACACC...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTAGTAGGCTGGGAAGTTaGCCATGGAGCTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSSRLGS*PWSWPQ
Trigger: CTGAGGCCAGCTCCATGGTCAACTTCCCAGCCTACT...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTGCTGAGCTGCATGTGTaGACAGACAGCCCACCACGT +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSAELHV*TDSPPR
Trigger: ACGTGGTGGGCTGTCTGTGCACACATGCAGCTCAGC...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTCACCCAAACCTAACCTaGTGTCCAGACGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSHPNLT*CPDARV
Trigger: CACCCTGGCGTCTGGACAGCAGGTTAGGTTTGGGTG...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGAGCTGGGAACACACATaGTATGTATGTCACCATGTG +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQSWEHT*YVCHHV
Trigger: CACATGGTGACATACATAGCATGTGTGTTCCCAGCT...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AGTGGGGCTATCTCAACACAGAACAGCAAAACCTATAGTCCCTTGGGAACTCTAATTTTGGTGGTGCCCTaGAACACGAGTACACCCATG +
Preference number: 4 (lower is better)
Translates to: SGAISTQNSKTYSPLGTLILVVP*NTSTPM
Trigger: CATGGGTGTACTCGTGTTCCAGGGCACCACCAAAAT...TAGAGTTCCCAAGGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CCA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCGGAAACTGCCTGATGTaGTTAGCCACAAAACCCCTG +
Preference number: 4 (lower is better)
Translates to: THNSWEHTCYVCHHVITTGNCLM*LATKPL
Trigger: CAGGGGTTTTGTGGCTAACCACATCAGGCAGTTTCC...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCTCTACTAGTTGTTTCTaGGTTCTTCCACTGTATCTG +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGSTSCF*VLPLYL
Trigger: CAGATACAGTGGAAGAACTCAGAAACAACTAGTAGA...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp GCTGAATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATTTCTCATTAACAACCTaGCTCAGCTTCCGTCGAGGC +
Preference number: 4 (lower is better)
Translates to: AECSSSSGAISTQNSKTYFSLTT*LSFRRG
Trigger: GCCTCGACGGAAGCTGAGTCAGGTTGTTAATGAGAA...ATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR TCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTTGTCCTGGGACAGAATaGTGCCCATGGTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSCPGTE*CPWCVW
Trigger: CCAGACACACCATGGGCATCATTCTGTCCCAGGACA...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGCACTTCCAGGAGTGCTaGGTCAAATCTGCATACTTC +
Preference number: 4 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVHFQEC*VKSAYF
Trigger: GAAGTATGCAGATTTGACTCAGCACTCCTGGAAGTG...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTTTTGGCCTTCGTATTTaGCTAATGATGGGTTTCATA +
Preference number: 4 (lower is better)
Translates to: SSSSLWLSFMVLCRAPHLFGLRI*LMMGFI
Trigger: TATGAAACCCATCATTAGGCAAATACGAAGGCCAAA...AAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR GCA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGGGCCTCAGGCTGAATTaGTCCTGGAGTTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVGLRLN*SWSFAI
Trigger: AATAGCAAAACTCCAGGAGCAATTCAGCCTGAGGCC...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp GGGAGAACTGTTCCAGGCACGTTAAGCAAGAGTGAGACCCCTGAACAGTCAATGAAGCACCACATTCTTTaGCCTTCGTATTTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: GRTVPGTLSKSETPEQSMKHHIL*PSYLPN
Trigger: ATTAGGCAAATACGAAGGCCAAAGAATGTGGTGCTT...CATTGACTGTTCAGGGGTCTCACTCTTGCTTAACGTGCCTGGAACAGTTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CCA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGTCAGATACCTGCAGCTaGGCATTTGTCAATGTGAAA +
Preference number: 4 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQSDTCS*AFVNVK
Trigger: TTTCACATTGACAAATGCCCAGCTGCAGGTATCTGA...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCCCAGAGTGGTCAAGATaGGTTTTTATCTATTTGCTC +
Preference number: 4 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGPEWSR*VFIYLL
Trigger: GAGCAAATAGATAAAAACCCATCTTGACCACTCTGG...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTAGGGCCCATGGCACCTaGTATGTGTTTACGGGTACG +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSRAHGT*YVFTGT
Trigger: CGTACCCGTAAACACATACCAGGTGCCATGGGCCCT...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCGTAGTGGCATGTTATTaGGGGAGCTGTTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: THNSWEHTCYVCHHVITTVVACY*GSCFQT
Trigger: AGTCTGAAAACAGCTCCCTCAATAACATGCCACTAC...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTCTCAGATTGACTGGCTaGGCTGCATGTGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSLRLTG*AACVHR
Trigger: TCTGTGCACACATGCAGCTCAGCCAGTCAATCTGAG...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTCCTCCACACTCTCAGTaGGCTGTATCCAGACACTTC +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSPPHSQ*AVSRHF
Trigger: GAAGTGTCTGGATACAGCTCACTGAGAGTGTGGAGG...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGAACTCCTCAGATACCTaGAGCTGGGCATTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVNSSDT*SWAFVN
Trigger: ATTGACAAATGCCCAGCTGCAGGTATCTGAGGAGTT...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTACCCAGGCTCATGCCTaGAATTCTGGCACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSTQAHA*NSGTLG
Trigger: TCCCAAAGTGCCAGAATTGCAGGCATGAGCCTGGGT...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTATGACATGGTGCCTTTaGCACTGGGACAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSMTWCL*HWDSSR
Trigger: CCTGGAACTGTCCCAGTGCCAAAGGCACCATGTCAT...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCACTCAGAGCGGTGGAATaGCAGAGGAGCTTGCATGAA +
Preference number: 4 (lower is better)
Translates to: SQICILLSISGFIRPHLSLRAVE*QRSLHE
Trigger: TTCATGCAAGCTCCTCTGCCATTCCACCGCTCTGAG...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCACTGGGTCATCGTCTATaGACTCCTCAGATACCTGCA +
Preference number: 4 (lower is better)
Translates to: SQICILLSISGFIRPHLSLGHRL*TPQIPA
Trigger: TGCAGGTATCTGAGGAGTTCATAGACGATGACCCAG...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCACGGACGTGTGGGTCTTaGTGTGCCTTCTTTCATATG +
Preference number: 4 (lower is better)
Translates to: SQICILLSISGFIRPHLSRTCGS*CAFFHM
Trigger: CATATGAAAGAAGGCACAGCAAGACCCACACGTCCG...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCAAGACAGAACCACAGCTaGTCACGACATGACAAAACC +
Preference number: 4 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASRQNHS*SRHDKT
Trigger: GGTTTTGTCATGTCGTGAGCAGCTGTGGTTCTGTCT...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp AGGCTGAATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTGAAATCTTTTCCTCTTaGAGCTTAGTTTACGGACCT +
Preference number: 4 (lower is better)
Translates to: RLNAVLQVGLSQHRTAKPEIFSS*SLVYGP
Trigger: AGGTCCGTAAACTAAGCTTCAAGAGGAAAAGATTTC...AGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR GCA 90 bp GCTGAATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATGTGTGGGTCTTGCTGTaGCTTCTTTCATATGGAATT +
Preference number: 4 (lower is better)
Translates to: AECSSSSGAISTQNSKTYVWVLL*LLSYGI
Trigger: AATTCCATATGAAAGAAGGCACAGCAAGACCCACAC...ATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CCA 90 bp CCACATGTGAACACCTGTACCGTTGCTCCTATTGAAGAGAAATCTCACTTCCCCAGGTCCATGAACCTCTaGATGAAGTTTGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: PHVNTCTVAPIEEKSHFPRSMNL*MKFDKK
Trigger: TTTCTTATCAAACTTCATCCAGAGGTTCATGGACCT...GGGGAAGTGAGATTTCTCTTCAATAGGAGCAACGGTACAGGTGTTCACATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTGTCCAGACGCCAGGGTaGGTTCCCTTAAAAACAAAA +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSVQTPG*VPLKTK
Trigger: TTTTGTTTTTAAGGGAACCCACCCTGGCGTCTGGAC...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTTGCACTACCCAACACTaGCTTGAAGAAGAGCCACAA +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSCTTQH*LEEEPQ
Trigger: TTGTGGCTCTTCTTCAAGCCAGTGTTGGGTAGTGCA...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTATGTATGTCACCATGTaGTCACAACCACAGCACATG +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSMYVTM*SQPQHM
Trigger: CATGTGCTGTGGTTGTGATCACATGGTGACATACAT...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGAAGAAGACGGCTTTTaGTTTTGGCTTAGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SQICILLSISGFIRPHLSEEDGF*FWLRLV
Trigger: GACCAACCTAAGCCAAAAGCAAAAGCCGTCTTCTTC...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCAGCACCAGTTCTTACTTaGATCAAAGCATATGGCAAA +
Preference number: 4 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASAPVLT*IKAYGK
Trigger: TTTGCCATATGCTTTGATTCAAGTAAGAACTGGTGC...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR TCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCAGGAACAAGCATACCTTaGAGACATATGTATTGGCAT +
Preference number: 4 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASGTSIP*RHMYWH
Trigger: ATGCCAATACATATGTCTTCAAGGTATGCTTGTTCC...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTGCTCCTGGAGTTTTaGTATTTAACCACTGTAAAC +
Preference number: 4 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASLLLEF*YLTTVN
Trigger: GTTTACAGTGGTTAAATAGCAAAACTCCAGGAGCAA...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TTAACCACTGTAAACTGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCAAATGGCAGAGGAGCTTaGATGAAAAATCAGAACATA +
Preference number: 4 (lower is better)
Translates to: LTTVNCLVKVEKSNVSASNGRGA*MKNQNI
Trigger: TATGTTCTGATTTTTCATGCAAGCTCCTCTGCCATT...TGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACAGTTTACAGTGGTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTTCAATAATGAGGCAGTaGCCCTTTGACACCTTTAAA +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSSIMRQ*PFDTFK
Trigger: TTTAAAGGTGTCAAAGGGCCACTGCCTCATTATTGA...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTTCAAACTTACATAAGTaGATTTTAAACCAACGCCTC +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSSNLHK*ILNQRL
Trigger: GAGGCGTTGGTTTAAAATGCACTTATGTAAGTTTGA...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR GCA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTACTGAAACTTCTAGCTaGATAAGCAAAATGATGAGA +
Preference number: 4 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSTETSS*ISKMMR
Trigger: TCTCATCATTTTGCTTATGCAGCTAGAAGTTTCAGT...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS GCA 90 bp GGGCCCGAGGGGCTGGGCCGATGGTGTGTCGGGGCCTCCAGCCACTaGTCCACTGCGCCTCTCTGCAGCTGGACTCTTGACGTAGGAAAC +
Preference number: 5 (lower is better)
Translates to: GPEGLGRWCVGASSH*STAPLCSWTLDVGN
Trigger: GTTTCCTACGTCAAGAGTCCAGCTGCAGAGAGGCGCAGTGGAGCAGTGGCTGGAGGCCCCGACACACCATCGGCCCAGCCCCTCGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000413432.2
ENST00000627550.2
CDS TCA 90 bp GCAGGGCTCAGACTCAGGGGGCTCTTCCGGCTGGAGGGAGAAGGCTaGGGACTCTTCGTGGAAAGGCCTGGACCAGGCTGGAGTGCGGGG +
Preference number: 5 (lower is better)
Translates to: AGLRLRGLFRLEGEG*GLFVERPGPGWSAG
Trigger: CCCCGCACTCCAGCCTGGTCCAGGCCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAGCCGGAAGAGCCCCCTGAGTCTGAGCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp GGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGCATCCTGCACGATGCTaGGGGCCCTCCCGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GRPLGLPLGSPDGRSAWLHPARC*GPSRLS
Trigger: GCTCAGCCGGGAGGGCCCCAAGCATCGTGCAGGATG...CAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CAA 90 bp GAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCCAGGGGCCTGGGAGCTGTGGCCTGGGAGCTGTGGCTaGAGCGGCTCCGCGCTCAAG +
Preference number: 5 (lower is better)
Translates to: EHCSGLVCVFEPGAWELWPGSCG*SGSALK
Trigger: CTTGAGCGCGGAGCCGCTCAAGCCACAGCTCCCAGG...CCACAGCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAGGCCTGAGCAGTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS TCA 90 bp CCCGGCTCCGCCAGCATCACTGAGGACAGGGCTCAGGAGTGGGGATaGGCCCTGTTCAGCTGGGCCCAAAGGCACCTGAAATGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: PGSASITEDRAQEWG*ALFSWAQRHLKCRA
Trigger: AGCCCTGCATTTCAGGTGCCTTTGGGCCCAGCTGAACAGGGCTCATCCCCACTCCTGAGCCCTGTCCTCAGTGATGCTGGCGGAGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000476799.1
ENST00000627550.2
CDS GCA 90 bp GAGCTGGTCTCAGAAGGACCCAGCAGGCGCTGCATCCGGCTGGCCTaGGCCTTCACCTCAAATAGCTCCGAGGTGTCTGAGGGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: ELVSEGPSRRCIRLA*AFTSNSSEVSEGCA
Trigger: CGCACACCCCTCAGACACCTCGGAGCTATTTGAGGTGAAGGCGCAGGCCAGCCGGATGCAGCGCCTGCTGGGTCCTTCTGAGACCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS GCA 90 bp GGTGTGGGAGTCTCCCGTGTGGGGGCTGAAGGGGTGTTACCAGAGTaGCAGCCTCTGCTCCACCTCGCGCAGGAAGCCTCTGTGGAACTC +
Preference number: 5 (lower is better)
Translates to: GVGVSRVGAEGVLPE*QPLLHLAQEASVEL
Trigger: GAGTTCCACAGAGGCTTCCTGCGCGAGGTGGAGCAGAGGCTGGCACTCTGGTAACACCCCTTCAGCCCCCACACGGGAGACTCCCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473510.1
CDS-3UTR CAA 90 bp GAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCGCCTTGTCTGCGTCTTaGAGCCAGGGGCCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: EGPGSGYAGCMAGPLFQCALSAS*SQGPGS
Trigger: GCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAGGC...GCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS GCA 90 bp GTGCACACAGACTCTACAAGAGGCCAAGGAGGACACTGGTATCCCTaGGCCATGGCAGCTGCACCCCAGGGGGTGAGCCATGGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: VHTDSTRGQGGHWYP*AMAAAPQGVSHGPE
Trigger: CTCTGGCCCATGGCTCACCCCCTGGGGTGCAGCTGCCATGGCGCAGGGATACCAGTGTCCTCCTTGGCCTCTTGTAGAGTCTGTGTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS CCA 90 bp CGGCCTGGCAGTGCAGGGGCCGTGTCACCGCCACTCTTGGCTGCTTaGATCGCGGAGTTCAGGTCCAGCATCCACTTCTCTTTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RPGSAGAVSPPLLAA*IAEFRSSIHFSFSS
Trigger: GCTGGAGAAAGAGAAGTGGATGCTGGACCTGAACTCCGCGATCCAAGCAGCCAAGAGTGGCGGTGACACGGCCCCTGCACTGCCAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000444371.1
ENST00000470617.1
ENST00000486736.5
CDS CCA 90 bp TACTGCCTCCATGGAGTACCTGTCTGGGCTGGACCGAGCAGACCCTaGAAGCTCACACAAAGGAGGGGCCACCAGAGGCTGGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: YCLHGVPVWAGPSRP*KLTQRRGHQRLGRG
Trigger: GCCTCTGCCCAGCCTCTGGTGGCCCCTCCTTTGTGTGAGCTTCCAGGGTCTGCTCGGTCCAGCCCAGACAGGTACTCCATGGAGGCAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CAA 90 bp GGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGCTCTGACGTGCATTGTGGTGTaGGCCCGGTGCTGGCCATGC +
Preference number: 5 (lower is better)
Translates to: GLFSSACSRPVLGRDPALTCIVV*ARCWPC
Trigger: GCATGGCCAGCACCGGGCCAACACCACAATGCACGT...CAGAGCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GCTGTGACCTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAACCTGCTCTGGGCAGGTaGAGCGTCATTCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: AVTCRAGPWGCHLVHQMEPALGR*SVIPPS
Trigger: GGAAGGAGGAATGACGCTCAACCTGCCCAGAGCAGG...TTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAGGTCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412332.1
CDS GCA 90 bp AGTGCGGCCTGGCAGTGCAGGGGCCGTGTCACCGCCACTCTTGGCTaGTTGGATCGCGGAGTTCAGGTCCAGCATCCACTTCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: SAAWQCRGRVTATLG*LDRGVQVQHPLLFL
Trigger: GAGAAAGAGAAGTGGATGCTGGACCTGAACTCCGCGATCCAAGCAGCCAAGAGTGGCGGTGACACGGCCCCTGCACTGCCAGGCCGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000444371.1
ENST00000470617.1
ENST00000486736.5
CDS GCA 90 bp GCATTGTGGTGTTGGCCCGGTGCTGGCCATGCCCCTCCAGGGAGCTaGGGACACCCCGAGCATCATCTTCTGACTCCTGCTCCAGAGATA +
Preference number: 5 (lower is better)
Translates to: ALWCWPGAGHAPPGS*GHPEHHLLTPAPEI
Trigger: TATCTCTGGAGCAGGAGTCAGAAGATGATGCTCGGGGTGTCCGCAGCTCCCTGGAGGGGCATGGCCAGCACCGGGCCAACACCACAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000444371.1
ENST00000470617.1
ENST00000486736.5
CDS CCA 90 bp ACACAGTGCGGCCTGGCAGTGCAGGGGCCGTGTCACCGCCACTCTTaGCTGCTTGGATCGCGGAGTTCAGGTCCAGCATCCACTTCTCTT +
Preference number: 5 (lower is better)
Translates to: TQCGLAVQGPCHRHS*LLGSRSSGPASTSL
Trigger: AAGAGAAGTGGATGCTGGACCTGAACTCCGCGATCCAAGCAGCCAAGAGTGGCGGTGACACGGCCCCTGCACTGCCAGGCCGCACTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000444371.1
ENST00000470617.1
ENST00000486736.5
CDS-3UTR CAA 90 bp GGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGGTGTCACCGCCACTCTaGGCTGCTTGGATCGCGGAG +
Preference number: 5 (lower is better)
Translates to: GMLGSNKLDGPTLPGHRGVSPPL*AAWIAE
Trigger: CTCCGCGATCCAAGCAGCCAAGAGTGGCGGTGACAC...CCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTCATCCTGCACGATGCTaGGGGCCCTCCCGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: AATWFTRWKVSMAVPRLSHPARC*GPSRLS
Trigger: GCTCAGCCGGGAGGGCCCCAAGCATCGTGCAGGATG...AGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CAA 90 bp GGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCGGGTGTGCCCAGGCTTaGGTCCGATGCCGAGAGCAC +
Preference number: 5 (lower is better)
Translates to: GTQGVWQGLFSSACSRPVGCAQA*VRCREH
Trigger: GTGCTCTCGGCATCGGACCAAAGCCTGGGCACACCC...GACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS CCA 90 bp AAGGCACCTGAAATGCAGGGCTCAGACTCAGGGGGCTCTTCCGGCTaGAGGGAGAAGGCTGAGGACTCTTCGTGGAAAGGCCTGGACCAG +
Preference number: 5 (lower is better)
Translates to: KAPEMQGSDSGGSSG*REKAEDSSWKGLDQ
Trigger: CTGGTCCAGGCCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAGCCGGAAGAGCCCCCTGAGTCTGAGCCCTGCATTTCAGGTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000627550.2
CDS CCA 90 bp GCTGTCCAAGTGCACACAGACTCTACAAGAGGCCAAGGAGGACACTaGTATCCCTGCGCCATGGCAGCTGCACCCCAGGGGGTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: AVQVHTDSTRGQGGH*YPCAMAAAPQGVSH
Trigger: ATGGCTCACCCCCTGGGGTGCAGCTGCCATGGCGCAGGGATACCAGTGTCCTCCTTGGCCTCTTGTAGAGTCTGTGTGCACTTGGACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS-3UTR CAA 90 bp CTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGTCTGCAGGCACGCGCTaGTGTCTGGGCTCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: LPLGSPDGRSAWLCHACLSAGTR*CLGSSQ
Trigger: CTGCGAGGAGCCCAGACACAAGCGCGTGCCTGCAGA...CAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp TATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCGCCACTCTTGGCTGCTaGGATCGCGGAGTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: YGRASFPVLALGQSSAGTATLGC*DRGVQV
Trigger: GACCTGAACTCCGCGATCCAAGCAGCCAAGAGTGGC...GGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp AGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGACCACAGCCACTTCCAAACCTGGGCAGGTaGAGCGTCATTCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: RPTHTAGASGDPVRPQPLPNLGR*SVIPPS
Trigger: GGAAGGAGGAATGACGCTCAACCTGCCCAGGTTTGG...AAGTGGCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp TATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCCCTGGGGCTGCCACTaGGTTCACCAGATGGAAGGT +
Preference number: 5 (lower is better)
Translates to: YGRASFPVLALGQSSAGTPWGCH*VHQMEG
Trigger: ACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGG...GGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CAA 90 bp GAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCCAGGGGCCTGGGAGCTGTGGGGGCACAGGGGGACTTaGGTTTCTGCTTCTCTAGAG +
Preference number: 5 (lower is better)
Translates to: EHCSGLVCVFEPGAWELWGHRGT*VSASLE
Trigger: CTCTAGAGAAGCAGAAACCAAAGTCCCCCTGTGCCC...CCACAGCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAGGCCTGAGCAGTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GTGACCTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTGGGCACAGGGGGACTTaGGTTTCTGCTTCTCTAGAG +
Preference number: 5 (lower is better)
Translates to: VTCRAGPWGCHLVHQMEGGHRGT*VSASLE
Trigger: CTCTAGAGAAGCAGAAACCAAAGTCCCCCTGTGCCC...ACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CAA 90 bp ATGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGGCAGAGCTCCACACCTaGGGCGGTCACGTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: MEEGELESSSSLWLSFMVAELHT*GGHVVN
Trigger: GTTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGC...CACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS GCA 90 bp ACTCTGAGGTGCAGGTGCTTCTCTTGCATTCTGGGCAAGAGAGTCTaGCCAGGCTCAAGGGTGCTAACTCCCACAGGGGTCTGGGCACCC +
Preference number: 5 (lower is better)
Translates to: TLRCRCFSCILGKRV*PGSRVLTPTGVWAP
Trigger: GGGTGCCCAGACCCCTGTGGGAGTTAGCACCCTTGAGCCTGGGCAGACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000418082.1
ENST00000445489.1
ENST00000464142.5
ENST00000478489.5
ENST00000479427.5
ENST00000492868.1
ENST00000627550.2
CDS-3UTR CAA 90 bp GGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGTCTGCAGGCACGCGCTaGTGTCTGGGCTCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: GSLSRRRHCGSASWCYAESAGTR*CLGSSQ
Trigger: CTGCGAGGAGCCCAGACACAAGCGCGTGCCTGCAGA...CTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp GGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCGTTGATGACTGCCTTTaGTGTGGGCTTTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: GSALKTRTFFPGPQIAAGVDDCL*CGLWRA
Trigger: GGCCCTCCAAAGCCCACACAAAAGGCAGTCATCAAC...GCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGATGGCTGTGCCACGCTaGTCTGAGAGGGTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: AVGTQGVWQGLFSSACSRMAVPR*SERVLA
Trigger: TGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCAT...CCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CAA 90 bp GGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCATGGCTGTGCCACGCTaGTCTGAGAGGGTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GTQGVWQGLFSSACSRPVMAVPR*SERVLA
Trigger: TGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCAT...GACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CAA 90 bp GAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTAGCAGAGCTCCACACCTaGGGCGGTCACGTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: EEGELESSSSLWLSFMVLAELHT*GGHVVN
Trigger: GTTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGC...TAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CAA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGCCATGGTGCCCACGCTaGCCTTCCCTTCCGTGTCTA +
Preference number: 5 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLPWCPR*PSLPCL
Trigger: TAGACACGGAAGGGAAGGCAAGCGTGGGCACCATGG...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CAA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGGCTGGTGGCCTCTCATaGACGGGGACTGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRAGGLS*TGTAAG
Trigger: TCCTGCAGCAGTCCCCGTCAATGAGAGGCCACCAGC...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS TCA 90 bp GGAAGGCCGAGCTGGACTCAGAGCGGACTGAGTAGGCTGGGAAGTTaGCCATGGAGCTGGCCTCAGATTGACTGGCTGAGCTGCATGTGT +
Preference number: 5 (lower is better)
Translates to: GRPSWTQSGLSRLGS*PWSWPQIDWLSCMC
Trigger: ACACATGCAGCTCAGCCAGTCAATCTGAGGCCAGCTCCATGGTCAACTTCCCAGCCTACTCAGTCCGCTCTGAGTCCAGCTCGGCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS CCA 90 bp AAGAGAGTCTGCCCAGGCTCAAGGGTGCTAACTCCCACAGGGGTCTaGGCACCCAAGCGCATCCCTGCAGTCTGCAGGACTCTGTATGTT +
Preference number: 5 (lower is better)
Translates to: KRVCPGSRVLTPTGV*APKRIPAVCRTLYV
Trigger: AACATACAGAGTCCTGCAGACTGCAGGGATGCGCTTGGGTGCCCAGACCCCTGTGGGAGTTAGCACCCTTGAGCCTGGGCAGACTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000418082.1
ENST00000445489.1
ENST00000464142.5
ENST00000478489.5
ENST00000479427.5
ENST00000492868.1
ENST00000627550.2
CDS CCA 90 bp AAGGCACCTGAAATGCAGGGCTCAGACTCAGGGGGCTCTTCCGGCTaGAGGGAGAAGGCTGAGGACTCTTCGTGGAAAGGCCTGGAAATG +
Preference number: 5 (lower is better)
Translates to: KAPEMQGSDSGGSSG*REKAEDSSWKGLEM
Trigger: CATTTCCAGGCCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAGCCGGAAGAGCCCCCTGAGTCTGAGCCCTGCATTTCAGGTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476799.1
CDS-3UTR CAA 90 bp GGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTTGCAGCTCAAACTCCTaGTACACTGCCTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: GQAPGAATWFTRWKVSMACSSNS*YTASNF
Trigger: GAAGTTGGAGGCAGTGTACAAGGAGTTTGAGCTGCA...AGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp TTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCATTCCACCAGCATGCCTaGGAGGGGAAGGAGGCCCCG +
Preference number: 5 (lower is better)
Translates to: FPLEGMLGSNKLDGPTLPFHQHA*EGKEAP
Trigger: CGGGGCCTCCTTCCCCTCCAAGGCATGCTGGTGGAA...TGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCCACTTCCCATCTGTaGAGAAGCCTCAGGACAGAG +
Preference number: 5 (lower is better)
Translates to: GSWQWVRRVYGRASFPVLATSHL*RSLRTE
Trigger: CTCTGTCCTGAGGCTTCTCAACAGATGGGAAGTGGC...AAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GCCCAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTCCCATCTACTTCCCGTaGGAAGGAATGCTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: AQALVRCREHCSGLVCVFPIYFP*EGMLGS
Trigger: ACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGG...AAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTCCCATCTACTTCCCGTaGGAAGGAATGCTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: GSWQWVRRVYGRASFPVLPIYFP*EGMLGS
Trigger: ACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGG...AAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CAA 90 bp CCCTTGGGAACTCTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGATTGGGTAGATGGAGGAGGGGGAGCTaGAGTCGTCGTCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: PLGTLGVRSGQSLAGLGRWRRGS*SRRRHC
Trigger: ACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCA...TCTACCCAATCCTGCGAGACTCTGGCCACTCCTCACACCTAGAGTTCCCAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CAA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGGCGTGGGTGAGTGGGTaGCCTTGTAAAGGAACCCAG +
Preference number: 5 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLAWVSG*PCKGTQ
Trigger: CTGGGTTCCTTTACAAGGCAACCCACTCACCCACGC...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS TCA 90 bp ATGAGAAAGGGCTGTGAGGCTGGCTTAGAGCCGCTACTACTCTCCTaGCCATTCAACCGCCAGCCTCACACAGTGCCAGGCGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: MRKGCEAGLEPLLLS*PFNRQPHTVPGASC
Trigger: ACAGGAAGCGCCTGGCACTGTGTGAGGCTGGCGGTTGAATGGTCAGGAGAGTAGTAGCGGCTCTAAGCCAGCCTCACAGCCCTTTCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476799.1
CDS TCA 90 bp GCTGGAGGGAGAAGGCTGAGGACTCTTCGTGGAAAGGCCTGGAAATaGACGGGGAGGGGGATGGAGCGAGAAATGAGAAAGGGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: AGGRRLRTLRGKAWK*TGRGMEREMRKGCE
Trigger: CTCACAGCCCTTTCTCATTTCTCGCTCCATCCCCCTCCCCGTTCATTTCCAGGCCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476799.1
CDS GCA 90 bp AGGTTCTCTATGCCCACCAGGTCCCGCTGCAGCTCCGTTAGCTTCTaGAGGTTCTCCAGCCGGATGAGAATGTGCTGTAGTGTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: RFSMPTRSRCSSVSF*RFSSRMRMCCSVVV
Trigger: GACCACCACACTACAGCACATTCTCATCCGGCTGGAGAACCTGCAGAAGCTAACGGAGCTGCAGCGGGACCTGGTGGGCATAGAGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000491425.1
CDS CCA 90 bp CCTCGCGCAGGAAGCCTCTGTGGAACTCATAGATGGGATCGATGTTaGAGAAGAGCAGCGTCATCAGAGTCGCAGGCATGGCGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PRAGSLCGTHRWDRC*RRAASSESQAWRPP
Trigger: AGGAGGACGCCATGCCTGCGACTCTGATGACGCTGCTCTTCTCCAACATCGATCCCATCTATGAGTTCCACAGAGGCTTCCTGCGCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000422951.1
ENST00000473510.1
ENST00000476799.1
ENST00000627550.2
CDS CCA 90 bp GCCTCTGCTCCACCTCGCGCAGGAAGCCTCTGTGGAACTCATAGATaGGATCGATGTTGGAGAAGAGCAGCGTCATCAGAGTCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: ASAPPRAGSLCGTHR*DRCWRRAASSESQA
Trigger: TGCCTGCGACTCTGATGACGCTGCTCTTCTCCAACATCGATCCCATCTATGAGTTCCACAGAGGCTTCCTGCGCGAGGTGGAGCAGAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000422951.1
ENST00000473510.1
ENST00000476799.1
ENST00000627550.2
CDS CCA 90 bp CCAGCATGCCTTGGAGGGGAAGGAGGCCCCGGATCCGGAAGTGGCTaGTCCCTGCAACTCCTTTGCTTGTGTACAGCAACATATCTGAGA +
Preference number: 5 (lower is better)
Translates to: PACLGGEGGPGSGSG*SLQLLCLCTATYLR
Trigger: TCTCAGATATGTTGCTGTACACAAGCAAAGGAGTTGCAGGGACCAGCCACTTCCGGATCCGGGGCCTCCTTCCCCTCCAAGGCATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000486736.5
CDS CCA 90 bp TCCACCAGCATGCCTTGGAGGGGAAGGAGGCCCCGGATCCGGAAGTaGCTGGTCCCTGCAACTCCTTTGCTTGTGTACAGCAACATATCT +
Preference number: 5 (lower is better)
Translates to: STSMPWRGRRPRIRK*LVPATPLLVYSNIS
Trigger: AGATATGTTGCTGTACACAAGCAAAGGAGTTGCAGGGACCAGCCACTTCCGGATCCGGGGCCTCCTTCCCCTCCAAGGCATGCTGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000486736.5
CDS-3UTR CAA 90 bp GAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCAAATACTCGTTCACTTaGAGGTGCTCTCGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: EGPGSGYAGCMAGPLFQCKYSFT*RCSRSS
Trigger: GCTGGACCGAGAGCACCTCAAAGTGAACGAGTATTT...GCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp AGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGACCACAGCCACTTGTGGGAAACTGCCAGTaGAATCTTGGTTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: RPTHTAGASGDPVRPQPLVGNCQ*NLGSFP
Trigger: AGGGAAGGAACCAAGATTCAACTGGCAGTTTCCCAC...AAGTGGCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GCTGTGACCTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAACGGACCTTGGACCAGTaGAAAGTGTTGATTTTGGTG +
Preference number: 5 (lower is better)
Translates to: AVTCRAGPWGCHLVHQMERTLDQ*KVLILV
Trigger: CACCAAAATCAACACTTTCAACTGGTCCAAGGTCCG...TTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAGGTCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp TATAGTCCCTTGGGAACTCTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGATTGGCAGAGCTCCACACCTaGGGCGGTCACGTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: YSPLGTLGVRSGQSLAGLAELHT*GGHVVN
Trigger: GTTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGC...CAATCCTGCGAGACTCTGGCCACTCCTCACACCTAGAGTTCCCAAGGGACTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CAA 90 bp GAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACTGGAGGAGGGGGAGCTaGAGTCGTCGTCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: ESSSSLWLSFMVLCRAPHWRRGS*SRRRHC
Trigger: ACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCA...GTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS TCA 90 bp TGGCATGTTATTGAGGGAGCTGTTTTCAGACTGGCTGTTTCTCAGTaGGCTGGTCTCAGAAGGACCCAGCAGGCGCTGCATCCGGCTGGC +
Preference number: 5 (lower is better)
Translates to: WHVIEGAVFRLAVSQ*AGLRRTQQALHPAG
Trigger: GCCAGCCGGATGCAGCGCCTGCTGGGTCCTTCTGAGACCAGCTCACTGAGAAACAGCCAGTCTGAAAACAGCTCCCTCAATAACATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS GCA 90 bp AAGGGTGCTAACTCCCACAGGGGTCTGGGCACCCAAGCGCATCCCTaGAGTCTGCAGGACTCTGTATGTTCCTTCTATCTCCCCCATTCT +
Preference number: 5 (lower is better)
Translates to: KGANSHRGLGTQAHP*SLQDSVCSFYLPHS
Trigger: AGAATGGGGGAGATAGAAGGAACATACAGAGTCCTGCAGACTGCAGGGATGCGCTTGGGTGCCCAGACCCCTGTGGGAGTTAGCACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000418082.1
ENST00000445489.1
ENST00000464142.5
ENST00000478489.5
ENST00000479427.5
ENST00000492868.1
ENST00000627550.2
CDS GCA 90 bp CACAAGGTGACTGCTGGCAATGCTAGGTGGGGCTTGGAAGCCCAGTaGTGTCCAAGTGCACACAGACTCTACAAGAGGCCAAGGAGGACA +
Preference number: 5 (lower is better)
Translates to: HKVTAGNARWGLEAQ*CPSAHRLYKRPRRT
Trigger: TGTCCTCCTTGGCCTCTTGTAGAGTCTGTGTGCACTTGGACAGCACTGGGCTTCCAAGCCCCACCTAGCATTGCCAGCAGTCACCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS CCA 90 bp TCAGCATGCCTTGGAGGGGAAGGAGGCCCCGGATCCGGAAGTGGCTaGTCCCTGCAACTCCTTTGCTTGTGTACAGCAACATATCTGAGA +
Preference number: 5 (lower is better)
Translates to: SACLGGEGGPGSGSG*SLQLLCLCTATYLR
Trigger: TCTCAGATATGTTGCTGTACACAAGCAAAGGAGTTGCAGGGACCAGCCACTTCCGGATCCGGGGCCTCCTTCCCCTCCAAGGCATGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491425.1
CDS CCA 90 bp TCCATCAGCATGCCTTGGAGGGGAAGGAGGCCCCGGATCCGGAAGTaGCTGGTCCCTGCAACTCCTTTGCTTGTGTACAGCAACATATCT +
Preference number: 5 (lower is better)
Translates to: SISMPWRGRRPRIRK*LVPATPLLVYSNIS
Trigger: AGATATGTTGCTGTACACAAGCAAAGGAGTTGCAGGGACCAGCCACTTCCGGATCCGGGGCCTCCTTCCCCTCCAAGGCATGCTGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491425.1
CDS-3UTR CAA 90 bp GCCCAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGACCAGTTGAAAGTGTaGATTTTGGTGGTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: AQALVRCREHCSGLVCVFDQLKV*ILVVPW
Trigger: CCAGGGCACCACCAAAATCAACACTTTCAACTGGTC...AAAGACGCAGACAAGGCCTGAGCAGTGCTCTCGGCATCGGACCAAAGCCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp TATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCACGGACGTGTGGGTCTaGCTGTGCCTTCTTTCATAT +
Preference number: 5 (lower is better)
Translates to: YGRASFPVLALGQSSAGTTDVWV*LCLLSY
Trigger: ATATGAAAGAAGGCACAGCAAGACCCACACGTCCGT...GGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp CGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGCCTTTTGTGTGGGCTTaGGAGGGCCCTTCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: RRRHCGSASWCYAELHTLPFVWA*EGPSQS
Trigger: ACTCTGGGAAGGGCCCTCCAAAGCCCACACAAAAGG...CAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CAA 90 bp GGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCCTTTTGTGTGGGCTTaGGAGGGCCCTTCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: GSLSRRRHCGSASWCYAEPFVWA*EGPSQS
Trigger: ACTCTGGGAAGGGCCCTCCAAAGCCCACACAAAAGG...CTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CAA 90 bp CTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGCTCTGGGGCTTTCAAATGTGTACTaGCTCTCAGCCCGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LFSSACSRPVLGRDPALGLSNVY*LSARKK
Trigger: CTTCTTCCGGGCTGAGAGCAAGTACACATTTGAAAG...CCCCAGAGCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGACTTTGGTTGTGCAGGTGCTTCTCTaGCATTCTGGGCAAGAGAGT +
Preference number: 5 (lower is better)
Translates to: GSNKLDGPTLPGHRGTLVVQVLL*HSGQES
Trigger: ACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCAC...AACCAAAGTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCGTGCAGGTGCTTCTCTaGCATTCTGGGCAAGAGAGT +
Preference number: 5 (lower is better)
Translates to: EGELESSSSLWLSFMVLCVQVLL*HSGQES
Trigger: ACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCAC...GCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp CTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTCAGCAGTAGGACTGAGTATTTaGAAACTCCATCCCGAAGTA +
Preference number: 5 (lower is better)
Translates to: LQGRPLGLPLGSPDGRSAVGLSI*KLHPEV
Trigger: TACTTCGGGATGGAGTTTCAAAATACTCAGTCCTAC...TGCTGACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp ATGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGGTGGGAAACTGCCAGTaGAATCTTGGTTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: MEEGELESSSSLWLSFMVVGNCQ*NLGSFP
Trigger: AGGGAAGGAACCAAGATTCAACTGGCAGTTTCCCAC...CACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp GGGGCTATCTCAACACAGAACAGCAAAACCTATAGTCCCTTGGGAACTCTAGGTTCTGCAGGCACGCGCTaGTGTCTGGGCTCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: GAISTQNSKTYSPLGTLGSAGTR*CLGSSQ
Trigger: CTGCGAGGAGCCCAGACACAAGCGCGTGCCTGCAGA...ACCTAGAGTTCCCAAGGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CAA 90 bp GTGTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCACCTTTTGTGTGGGCTTaGGAGGGCCCTTCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: VCEQSSRPSTSRWKECWAPFVWA*EGPSQS
Trigger: ACTCTGGGAAGGGCCCTCCAAAGCCCACACAAAAGG...TGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp AGCTTCCGTCGAGGCAGGAAAAGGGCACCTAGGCTGAATGCAGTTCTTCAAGTGCCTTTTGTGTGGGCTTaGGAGGGCCCTTCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: SFRRGRKRAPRLNAVLQVPFVWA*EGPSQS
Trigger: ACTCTGGGAAGGGCCCTCCAAAGCCCACACAAAAGG...CACTTGAAGAACTGCATTCAGCCTAGGTGCCCTTTTCCTGCCTCGACGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CAA 90 bp GAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTCTTTCAAATGTGTACTaGCTCTCAGCCCGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: ERVLAVGTQGVWQGLFSSLSNVY*LSARKK
Trigger: CTTCTTCCGGGCTGAGAGCAAGTACACATTTGAAAG...ACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CAA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGGGGTGTGCGTTCCCATaGAAGTCACTTTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRGCAFP*KSLSSS
Trigger: TGAGGAGGAAAGTGACTTCAATGGGAACGCACACCC...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CAA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGCAGAGTCCCACGAGTTaGACCACAGCACACAGGAGG +
Preference number: 5 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVQSPTS*TTAHRR
Trigger: CCTCCTGTGTGCTGTGGTCAAACTCGTGGGACTCTG...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS GCA 90 bp GAAGGAGGCCCCGGATCCGGAAGTGGCTGGTCCCTGCAACTCCTTTaGTTGTGTACAGCAACATATCTGAGAACTGAGAAGCAGCAAGCT +
Preference number: 5 (lower is better)
Translates to: EGGPGSGSGWSLQLL*LCTATYLRTEKQQA
Trigger: AGCTTGCTGCTTCTCAGTTCTCAGATATGTTGCTGTACACAAGCAAAGGAGTTGCAGGGACCAGCCACTTCCGGATCCGGGGCCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486736.5
CDS-3UTR CAA 90 bp GGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGTGCAGGTGCTTCTCTaGCATTCTGGGCAAGAGAGT +
Preference number: 5 (lower is better)
Translates to: GELESSSSLWLSFMVLCRVQVLL*HSGQES
Trigger: ACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCAC...TCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp TGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTCGGACCTTGGACCAGTaGAAAGTGTTGATTTTGGTG +
Preference number: 5 (lower is better)
Translates to: WRRGSLSRRRHCGSASWCRTLDQ*KVLILV
Trigger: CACCAAAATCAACACTTTCAACTGGTCCAAGGTCCG...ACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp CCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGCTTAGTTTACGGACCTaGGACCAGTTGAAAGTGTTG +
Preference number: 5 (lower is better)
Translates to: PRCYMRPTHTAGASGDPVLSLRT*DQLKVL
Trigger: CAACACTTTCAACTGGTCCAAGGTCCGTAAACTAAG...CACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp CTCAGCTTCCGTCGAGGCAGGAAAAGGGCACCTAGGCTGAATGCAGTTCTTCAAGTTGATGACTGCCTTTaGTGTGGGCTTTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LSFRRGRKRAPRLNAVLQVDDCL*CGLWRA
Trigger: GGCCCTCCAAAGCCCACACAAAAGGCAGTCATCAAC...TTGAAGAACTGCATTCAGCCTAGGTGCCCTTTTCCTGCCTCGACGGAAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CAA 90 bp AGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCGTTGATGACTGCCTTTaGTGTGGGCTTTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: SLSRRRHCGSASWCYAELVDDCL*CGLWRA
Trigger: GGCCCTCCAAAGCCCACACAAAAGGCAGTCATCAAC...GAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CAA 90 bp TTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACGTTGATGACTGCCTTTaGTGTGGGCTTTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LSRRRHCGSASWCYAELHVDDCL*CGLWRA
Trigger: GGCCCTCCAAAGCCCACACAAAAGGCAGTCATCAAC...GTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CAA 90 bp GGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGACTTTGGTTGATGTCCCCGATTCGTaGATGACTGCCTTTTGTGTG +
Preference number: 5 (lower is better)
Translates to: GSNKLDGPTLPGHRGTLVDVPDS*MTAFCV
Trigger: CACACAAAAGGCAGTCATCAACGAATCGGGGACATC...AACCAAAGTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp CCCTTGGGAACTCTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGATTGGGTAGAGATGTCCCCGATTCGTaGATGACTGCCTTTTGTGTG +
Preference number: 5 (lower is better)
Translates to: PLGTLGVRSGQSLAGLGRDVPDS*MTAFCV
Trigger: CACACAAAAGGCAGTCATCAACGAATCGGGGACATC...TCTACCCAATCCTGCGAGACTCTGGCCACTCCTCACACCTAGAGTTCCCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS-3UTR CAA 90 bp TATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGCAACTCCTTTGCTaGTGTACAGCAACATATCTG +
Preference number: 5 (lower is better)
Translates to: YGRASFPVLALGQSSAGTLQLLC*CTATYL
Trigger: CAGATATGTTGCTGTACACAAGCAAAGGAGTTGCAG...GGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp TTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCATGGCTGCCACCACGATaGTTTTCTGAGCCGCGTAGA +
Preference number: 5 (lower is better)
Translates to: FPLEGMLGSNKLDGPTLPWLPPR*FSEPRR
Trigger: TCTACGCGGCTCAGAAAACAATCGTGGTGGCAGCCA...TGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGGAAGAACAAACAGAAGTaGGTAAAGACGACCCAGAGC +
Preference number: 5 (lower is better)
Translates to: DGRSAWLCHACLRGSWQWKNKQK*VKTTQS
Trigger: GCTCTGGGTCGTCTTTACCAACTTCTGTTTGTTCTT...CCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp ATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCCCTGGGGCTGCCACTaGGTTCACCAGATGGAAGGT +
Preference number: 5 (lower is better)
Translates to: IYFPLEGMLGSNKLDGPTPWGCH*VHQMEG
Trigger: ACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGG...GGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000412332.1
CDS-3UTR CAA 90 bp TTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACGCACGACCTGCACTGTaGTCCACATGTGAACACCTG +
Preference number: 5 (lower is better)
Translates to: LSRRRHCGSASWCYAELHARPAL*STCEHL
Trigger: CAGGTGTTCACATGTGGACAACAGTGCAGGTCGTGC...GTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CAA 90 bp TACCTCTGCTGGGGTAGGGGCATGATCCCACTCCTTAGGAAGGAACATTCCAGCAAGGAAAACCAGCCCTaGCAAGATGCCCTCAATGGC +
Preference number: 5 (lower is better)
Translates to: YLCWGRGMIPLLRKEHSSKENQP*QDALNG
Trigger: GCCATTGAGGGCATCTTGCAAGGGCTGGTTTTCCTT...GCTGGAATGTTCCTTCCTAAGGAGTGGGATCATGCCCCTACCCCAGCAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS TCA 90 bp AGGTACAATGCAGGCCACAAAGAAAGGCTCTGCAAACCAGCCAGGTaGCCACAGGGATCTGGGCCATTCTTGAGCTTCTCTGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: RYNAGHKERLCKPAR*PQGSGPFLSFSAMA
Trigger: TGCCATTGCAGAGAAGCTCAAGAATGGCCCAGATCCCTGTGGTCACCTGGCTGGTTTGCAGAGCCTTTCTTTGTGGCCTGCATTGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479427.5
ENST00000492868.1
CDS-3UTR CAA 90 bp CCTCCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAAATATTTCCATGGTGTaGTCCAGCAGCTTTACTCTG +
Preference number: 5 (lower is better)
Translates to: PPRCYMRPTHTAGASGDPNISMV*SSSFTL
Trigger: CAGAGTAAAGCTGCTGGACAACACCATGGAAATATT...TGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAACATCTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp AGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCGTGGGAAACTGCCAGTaGAATCTTGGTTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: SRRRHCGSASWCYAELHTVGNCQ*NLGSFP
Trigger: AGGGAAGGAACCAAGATTCAACTGGCAGTTTCCCAC...GGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp CTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTTGAAAGTGTTGATTTaGGTGGTGCCCTGGAACACG +
Preference number: 5 (lower is better)
Translates to: LGSPDGRSAWLCHACLRGLKVLI*VVPWNT
Trigger: CGTGTTCCAGGGCACCACCAAAATCAACACTTTCAA...CCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCAGAAATCTTTTCCTCTaGAAGCTTAGTTTACGGACC +
Preference number: 5 (lower is better)
Translates to: EGPGSGYAGCMAGPLFQCRNLFL*KLSLRT
Trigger: GGTCCGTAAACTAAGCTTCAAGAGGAAAAGATTTCT...GCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGACGGACGTGTGGGTCTaGCTGTGCCTTCTTTCATAT +
Preference number: 5 (lower is better)
Translates to: GSLSRRRHCGSASWCYAETDVWV*LCLLSY
Trigger: ATATGAAAGAAGGCACAGCAAGACCCACACGTCCGT...CTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp CCCTTGGGAACTCTAGGTGTGAGGAGTGGCCAGAGTCTCGCAGGATTGGGTAGAATGAGATGCTCTGTTTaGGTAGGTCTGCAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: PLGTLGVRSGQSLAGLGRMRCSV*VGLQSE
Trigger: CTCTGACTGCAGACCTACCAAAACAGAGCATCTCAT...TCTACCCAATCCTGCGAGACTCTGGCCACTCCTCACACCTAGAGTTCCCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CAA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGATGAGATGCTCTGTTTaGGTAGGTCTGCAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRMRCSV*VGLQSE
Trigger: CTCTGACTGCAGACCTACCAAAACAGAGCATCTCAT...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CAA 90 bp GGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGATGTCCCCGATTCGTaGATGACTGCCTTTTGTGTG +
Preference number: 5 (lower is better)
Translates to: GELESSSSLWLSFMVLCRDVPDS*MTAFCV
Trigger: CACACAAAAGGCAGTCATCAACGAATCGGGGACATC...TCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CAA 90 bp GCCACTTCCCATCTGTTGAGAAGCCTCAGGACAGAGGTCACCTCTGTGTCCTGCGTCCCTGCAACTCCTTaGCTTGTGTACAGCAACATA +
Preference number: 5 (lower is better)
Translates to: ATSHLLRSLRTEVTSVSCVPATP*LVYSNI
Trigger: TATGTTGCTGTACACAAGCAAAGGAGTTGCAGGGAC...GCAGGACACAGAGGTGACCTCTGTCCTGAGGCTTCTCAACAGATGGGAAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp CCATGGCACCTGGTATGTGTTTACGGGTACGCTGGATGGGTGGGCAGGGCCACCAGCACCAGTTCTTACTaGAATCAAAGCATATGGCAA +
Preference number: 5 (lower is better)
Translates to: PWHLVCVYGYAGWVGRATSTSSY*NQSIWQ
Trigger: TTGCCATATGCTTTGATTCAAGTAAGAACTGGTGCT...GGTGGCCCTGCCCACCCATCCAGCGTACCCGTAAACACATACCAGGTGCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS TCA 90 bp GGCTCTGCAAACCAGCCAGGTGACCACAGGGATCTGGGCCATTCTTaGGCTTCTCTGCAATGGCATAAATGCATGGTTTCCAAGGATGTC +
Preference number: 5 (lower is better)
Translates to: GSANQPGDHRDLGHS*ASLQWHKCMVSKDV
Trigger: GACATCCTTGGAAACCATGCATTTATGCCATTGCAGAGAAGCTCAAGAATGGCCCAGATCCCTGTGGTCACCTGGCTGGTTTGCAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479427.5
ENST00000492868.1
CDS GCA 90 bp AGGAAAAGAAAACGCCTCAGAGCCTCCAGCAAAGAAGGAGATGTCTaGTGGGTCATCGTCTATGAACTCCTCAGATACCTGCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RKRKRLRASSKEGDV*WVIVYELLRYLQLG
Trigger: GCCCAGCTGCAGGTATCTGAGGAGTTCATAGACGATGACCCAGCAGACATCTCCTTCTTTGCTGGAGGCTCTGAGGCGTTTTCTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS GCA 90 bp ACTTTCCTCCTCAAATGCAAAACCGTCTTCTGTGTTCATATCTACTaGCTCCATGGAGTACCTGTCTGGGCTGGACCGAGCAGACCCTGG +
Preference number: 5 (lower is better)
Translates to: TFLLKCKTVFCVHIY*LHGVPVWAGPSRPW
Trigger: CCAGGGTCTGCTCGGTCCAGCCCAGACAGGTACTCCATGGAGGCAGTAGATATGAACACAGAAGACGGTTTTGCATTTGAGGAGGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS GCA 90 bp AGCCGCTACTACTCTCCTGACCATTCAACCGCCAGCCTCACACAGTaGCAGGCGCTTCCTGTAAAATGTGTATGTACAGCCTCTATCACA +
Preference number: 5 (lower is better)
Translates to: SRYYSPDHSTASLTQ*QALPVKCVCTASIT
Trigger: TGTGATAGAGGCTGTACATACACATTTTACAGGAAGCGCCTGGCACTGTGTGAGGCTGGCGGTTGAATGGTCAGGAGAGTAGTAGCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476799.1
CDS CCA 90 bp CAGTGTGGAACAGACCACTCGTTATCACTTTCTTCCACCTGTGGGTaGGAGAAACGGTCCAAGTCTTGTGGCCAAGAAGGAACTGACAGC +
Preference number: 5 (lower is better)
Translates to: QCGTDHSLSLSSTCG*EKRSKSCGQEGTDS
Trigger: GCTGTCAGTTCCTTCTTGGCCACAAGACTTGGACCGTTTCTCCCACCCACAGGTGGAAGAAAGTGATAACGAGTGGTCTGTTCCACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS-3UTR CAA 90 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTAAATACTCGTTCACTTaGAGGTGCTCTCGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SSSSLWLSFMVLCRAPHLKYSFT*RCSRSS
Trigger: GCTGGACCGAGAGCACCTCAAAGTGAACGAGTATTT...AAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp CCAGGCACGTTAAGCAAGAGTGAGACCCCTGAACAGTCAATGCACGACCTGCACTTGAAAGTGTTGATTTaGGTGGTGCCCTGGAACACG +
Preference number: 5 (lower is better)
Translates to: PGTLSKSETPEQSMHDLHLKVLI*VVPWNT
Trigger: CGTGTTCCAGGGCACCACCAAAATCAACACTTTCAA...GTGCAGGTCGTGCATTGACTGTTCAGGGGTCTCACTCTTGCTTAACGTGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CAA 90 bp GGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGTTGAAAGTGTTGATTTaGGTGGTGCCCTGGAACACG +
Preference number: 5 (lower is better)
Translates to: GSLSRRRHCGSASWCYAELKVLI*VVPWNT
Trigger: CGTGTTCCAGGGCACCACCAAAATCAACACTTTCAA...CTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGACCAGTTGAAAGTGTaGATTTTGGTGGTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: SSSSLWLSFMVLCRAPHLDQLKV*ILVVPW
Trigger: CCAGGGCACCACCAAAATCAACACTTTCAACTGGTC...AAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp CGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGCGGACCTTGGACCAGTaGAAAGTGTTGATTTTGGTG +
Preference number: 5 (lower is better)
Translates to: RRRHCGSASWCYAELHTLRTLDQ*KVLILV
Trigger: CACCAAAATCAACACTTTCAACTGGTCCAAGGTCCG...CAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp CTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCAGATGTCCCCGATTCGTaGATGACTGCCTTTTGTGTG +
Preference number: 5 (lower is better)
Translates to: LESSSSLWLSFMVLCRAPDVPDS*MTAFCV
Trigger: CACACAAAAGGCAGTCATCAACGAATCGGGGACATC...TGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373287.8
ENST00000422951.1
ENST00000627550.2
CDS-3UTR CAA 90 bp ACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGACCTCGTCATGTCTTaGGAAGTAGCTGGTAAACTC +
Preference number: 5 (lower is better)
Translates to: TWFTRWKVSMAVPRLSERDLVMS*EVAGKL
Trigger: GAGTTTACCAGCTACTTCCAAAGACATGACGAGGTC...CCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp GAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCGTACCGTTGCTCCTATaGAAGAGAAATCTCACTTCC +
Preference number: 5 (lower is better)
Translates to: EGELESSSSLWLSFMVLCVPLLL*KRNLTS
Trigger: GGAAGTGAGATTTCTCTTCAATAGGAGCAACGGTAC...GCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CAA 90 bp AGGCTGAATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTTGGAGGAGGGGGAGCTaGAGTCGTCGTCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: RLNAVLQVGLSQHRTAKPWRRGS*SRRRHC
Trigger: ACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCA...AGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000422951.1
CDS TCA 90 bp TCTTCTCAAGGCAGTGCTGCTGGCCAGGCAAATACTCGTTCACTTTaGGGTGCTCTCGGTCCAGCGTTTCATCGTAATCTCCTATTTCCG +
Preference number: 5 (lower is better)
Translates to: SSQGSAAGQANTRSL*GALGPAFHRNLLFP
Trigger: CGGAAATAGGAGATTACGATGAAACGCTGGACCGAGAGCACCTCAAAGTGAACGAGTATTTGCCTGGCCAGCAGCACTGCCTTGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000471447.5
ENST00000485051.1
ENST00000627550.2
CDS TCA 90 bp GAGTGCTGGCTGCCACCACGATTGTTTTCTGAGCCGCGTAGATGGTaGAACAGTGTGGAACAGACCACTCGTTATCACTTTCTTCCACCA +
Preference number: 5 (lower is better)
Translates to: ECWLPPRLFSEPRRW*NSVEQTTRYHFLPP
Trigger: TGGTGGAAGAAAGTGATAACGAGTGGTCTGTTCCACACTGTTTCACCATCTACGCGGCTCAGAAAACAATCGTGGTGGCAGCCAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000486736.5
CDS TCA 90 bp GAGTGCTGGCTGCCACCACGATTGTTTTCTGAGCCGCGTAGATGGTaGAACAGTGTGGAACAGACCACTCGTTATCACTTTCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: ECWLPPRLFSEPRRW*NSVEQTTRYHFLPP
Trigger: AGGTGGAAGAAAGTGATAACGAGTGGTCTGTTCCACACTGTTTCACCATCTACGCGGCTCAGAAAACAATCGTGGTGGCAGCCAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS GCA 90 bp AATATTTCCATGGTGTTGTCCAGCAGCTTTACTCTGAGGTGCAGGTaGTTCTCTTGCATTCTGGGCAAGAGAGTCTGCCCAGGCTCAAGG +
Preference number: 5 (lower is better)
Translates to: NISMVLSSSFTLRCR*FSCILGKRVCPGSR
Trigger: CCTTGAGCCTGGGCAGACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGTAAAGCTGCTGGACAACACCATGGAAATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000418082.1
ENST00000445489.1
ENST00000464142.5
ENST00000473082.5
ENST00000478489.5
ENST00000479427.5
ENST00000492868.1
ENST00000627550.2
CDS CCA 90 bp TGCCACCACGATTGTTTTCTGAGCCGCGTAGATGGTGAAACAGTGTaGAACAGACCACTCGTTATCACTTTCTTCCACCTGTGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: CHHDCFLSRVDGETV*NRPLVITFFHLWVG
Trigger: TCCCACCCACAGGTGGAAGAAAGTGATAACGAGTGGTCTGTTCCACACTGTTTCACCATCTACGCGGCTCAGAAAACAATCGTGGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS CCA 90 bp CATTCTACCAGGTTTAAACGCTTCCACACTTGTGTCAGTAATACCTaGCCATCGCATTTAGGCTCCTTTCCAGTGTGGACGGCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: HSTRFKRFHTCVSNT*PSHLGSFPVWTASL
Trigger: GAGGGAGGCCGTCCACACTGGAAAGGAGCCTAAATGCGATGGCCAGGTATTACTGACACAAGTGTGGAAGCGTTTAAACCTGGTAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464142.5
ENST00000467260.1
CDS CCA 90 bp CCGCAGGGCAGGGCCTGCCCTGGATGGAAGCTGCTATTATGTGTCTaGCCATTCTCTAAAACAGATAGTAACCAGGCAAAAAGGGATCTT +
Preference number: 5 (lower is better)
Translates to: PQGRACPGWKLLLCV*PFSKTDSNQAKRDL
Trigger: AAGATCCCTTTTTGCCTGGTTACTATCTGTTTTAGAGAATGGCCAGACACATAATAGCAGCTTCCATCCAGGGCAGGCCCTGCCCTGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496470.1
CDS-3UTR CAA 90 bp GAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTAGTTTACGGACCTaGGACCAGTTGAAAGTGTTG +
Preference number: 5 (lower is better)
Translates to: ESSSSLWLSFMVLCRAPHLSLRT*DQLKVL
Trigger: CAACACTTTCAACTGGTCCAAGGTCCGTAAACTAAG...GTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp TGGAGGAGGGGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTAGAAATCTTTTCCTCTaGAAGCTTAGTTTACGGACC +
Preference number: 5 (lower is better)
Translates to: WRRGSLSRRRHCGSASWCRNLFL*KLSLRT
Trigger: GGTCCGTAAACTAAGCTTCAAGAGGAAAAGATTTCT...ACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCCCCTCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp GAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTATGAGATGCTCTGTTTaGGTAGGTCTGCAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: ELESSSSLWLSFMVLCRAMRCSV*VGLQSE
Trigger: CTCTGACTGCAGACCTACCAAAACAGAGCATCTCAT...AGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS GCA 90 bp ATGTCAAATATTTCCATGGTGTTGTCCAGCAGCTTTACTCTGAGGTaGAGGTGCTTCTCTTGCATTCTGGGCAAGAGAGTCTGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: MSNISMVLSSSFTLR*RCFSCILGKRVCPG
Trigger: GCCTGGGCAGACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGTAAAGCTGCTGGACAACACCATGGAAATATTTGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000418082.1
ENST00000445489.1
ENST00000464142.5
ENST00000473082.5
ENST00000478489.5
ENST00000479427.5
ENST00000492868.1
ENST00000627550.2
CDS CCA 90 bp TGCCACCACGATTGTTTTCTGAGCCGCGTAGATGGTGAAACAGTGTaGAACAGACCACTCGTTATCACTTTCTTCCACCAGCATGCCTTG +
Preference number: 5 (lower is better)
Translates to: CHHDCFLSRVDGETV*NRPLVITFFHQHAL
Trigger: CAAGGCATGCTGGTGGAAGAAAGTGATAACGAGTGGTCTGTTCCACACTGTTTCACCATCTACGCGGCTCAGAAAACAATCGTGGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000486736.5
CDS CCA 90 bp AAAAGAAAACGCCTCAGAGCCTCCAGCAAAGAAGGAGATGTCTGCTaGGTCATCGTCTATGAACTCCTCAGATACCTGCAGCTGGGCATT +
Preference number: 5 (lower is better)
Translates to: KRKRLRASSKEGDVC*VIVYELLRYLQLGI
Trigger: AATGCCCAGCTGCAGGTATCTGAGGAGTTCATAGACGATGACCCAGCAGACATCTCCTTCTTTGCTGGAGGCTCTGAGGCGTTTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS CCA 90 bp CCACAAAGAAAGGCTCTGCAAACCAGCCAGGTGACCACAGGGATCTaGGCCATTCTTGAGCTTCTCTGCAATGGCATAAATGCATGGTTT +
Preference number: 5 (lower is better)
Translates to: PQRKALQTSQVTTGI*AILELLCNGINAWF
Trigger: AAACCATGCATTTATGCCATTGCAGAGAAGCTCAAGAATGGCCCAGATCCCTGTGGTCACCTGGCTGGTTTGCAGAGCCTTTCTTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479427.5
ENST00000492868.1
CDS-3UTR CAA 90 bp GTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTGGGTAGGACTGAGTATTTaGAAACTCCATCCCGAAGTA +
Preference number: 5 (lower is better)
Translates to: VVVTVAQLHGVMQSSTPWVGLSI*KLHPEV
Trigger: TACTTCGGGATGGAGTTTCAAAATACTCAGTCCTAC...CCAAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp GTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTGTAGGACTGAGTATTTaGAAACTCCATCCCGAAGTA +
Preference number: 5 (lower is better)
Translates to: VVVVTVAQLHGVMQSSTPVGLSI*KLHPEV
Trigger: TACTTCGGGATGGAGTTTCAAAATACTCAGTCCTAC...AGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp GGGAGCTTGAGTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTTTGGCCTTCGTATTaGCCTAATGATGGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: GSLSRRRHCGSASWCYAELWPSY*PNDGFH
Trigger: ATGAAACCCATCATTAGGCAAATACGAAGGCCAAAG...CTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGACTCAAGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp TGTCTTCCTTATGGTTCTAAAGCCATGGTGCCCACGCTTGCCTTCCCTTCCGTGGCAACAGGGCTCATCTaGAAAAGCAGCATCAATAGT +
Preference number: 5 (lower is better)
Translates to: CLPYGSKAMVPTLAFPSVATGLI*KSSINS
Trigger: ACTATTGATGCTGCTTTTCAAGATGAGCCCTGTTGC...CACGGAAGGGAAGGCAAGCGTGGGCACCATGGCTTTAGAACCATAAGGAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CAA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCCTGGGACCCTTCCCATaGTCCTGGGACAGAATGATG +
Preference number: 5 (lower is better)
Translates to: THNSWEHTCYVCHHVITTLGPFP*SWDRMM
Trigger: CATCATTCTGTCCCAGGACAATGGGAAGGGTCCCAG...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CAA 90 bp CATGTGGTACCCAGCAGGGCCCATGGCACCTGGTATGTGTTTACGGGTACGCTGAACAAAAAGACAACTTaGTTAGTTCACAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: HVVPSRAHGTWYVFTGTLNKKTT*LVHSIS
Trigger: GCTGATGCTGTGAACTAACAAAGTTGTCTTTTTGTT...CAGCGTACCCGTAAACACATACCAGGTGCCATGGGCCCTGCTGGGTACCACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS TCA 90 bp GCTCAATGTCAAATATTTCCATGGTGTTGTCCAGCAGCTTTACTCTaGGGTGCAGGTGCTTCTCTTGCATTCTGGGCAAGAGAGTCTGCC +
Preference number: 5 (lower is better)
Translates to: AQCQIFPWCCPAALL*GAGASLAFWARESA
Trigger: GGCAGACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGTAAAGCTGCTGGACAACACCATGGAAATATTTGACATTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000418082.1
ENST00000445489.1
ENST00000473082.5
ENST00000627550.2
CDS TCA 90 bp TCACCTCAAATAGCTCCGAGGTGTCTGAGGGGTGTGCGTTCCCATTaGAGTCACTTTCCTCCTCAAATGCAAAACCGTCTTCTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: SPQIAPRCLRGVRSH*SHFPPQMQNRLLCS
Trigger: TGAACACAGAAGACGGTTTTGCATTTGAGGAGGAAAGTGACTTCAATGGGAACGCACACCCCTCAGACACCTCGGAGCTATTTGAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS TCA 90 bp CCTCAATGTCAAATATTTCCATGGTGTTGTCCAGCAGCTTTACTCTaGGGTGCAGGTGCTTCTCTTGCATTCTGGGCAAGAGAGTCTGCC +
Preference number: 5 (lower is better)
Translates to: PQCQIFPWCCPAALL*GAGASLAFWARESA
Trigger: GGCAGACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGTAAAGCTGCTGGACAACACCATGGAAATATTTGACATTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478489.5
ENST00000479427.5
ENST00000492868.1
CDS GCA 90 bp ACCAGCCAGGTGACCACAGGGATCTGGGCCATTCTTGAGCTTCTCTaGAATGGCATAAATGCATGGTTTCCAAGGATGTCAAGAAATCTG +
Preference number: 5 (lower is better)
Translates to: TSQVTTGIWAILELL*NGINAWFPRMSRNL
Trigger: CAGATTTCTTGACATCCTTGGAAACCATGCATTTATGCCATTGCAGAGAAGCTCAAGAATGGCCCAGATCCCTGTGGTCACCTGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479427.5
ENST00000492868.1
CDS-3UTR CAA 90 bp GTGTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCACTTTGGCCTTCGTATTaGCCTAATGATGGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: VCEQSSRPSTSRWKECWALWPSY*PNDGFH
Trigger: ATGAAACCCATCATTAGGCAAATACGAAGGCCAAAG...TGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp TCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTTCTTTGGCCTTCGTATTaGCCTAATGATGGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: SSSSLWLSFMVLCRAPHLLWPSY*PNDGFH
Trigger: ATGAAACCCATCATTAGGCAAATACGAAGGCCAAAG...AAGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp GTCGTCGTCGTCACTGTGGCTCAGCTTCATGGTGTTATGCAGAGCTCCACACCTAGAAATCTTTTCCTCTaGAAGCTTAGTTTACGGACC +
Preference number: 5 (lower is better)
Translates to: VVVVTVAQLHGVMQSSTPRNLFL*KLSLRT
Trigger: GGTCCGTAAACTAAGCTTCAAGAGGAAAAGATTTCT...AGGTGTGGAGCTCTGCATAACACCATGAAGCTGAGCCACAGTGACGACGACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373287.8
ENST00000627550.2
CDS-3UTR CAA 90 bp TCTGCTTCTCTAGAGGTACATGGGGAACAAGCGTGGCTTCTGCCAGACTTGTTTATGAGATGCTCTGTTTaGGTAGGTCTGCAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: SASLEVHGEQAWLLPDLFMRCSV*VGLQSE
Trigger: CTCTGACTGCAGACCTACCAAAACAGAGCATCTCAT...AAACAAGTCTGGCAGAAGCCACGCTTGTTCCCCATGTACCTCTAGAGAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp ACGAGTTTGACCACAGCACACAGGAGGCCATGGCCTATGGCCATCTTTCCCAGGCATTTTCACAGGTATTaGTTAGCCAATGTAGAAAGC +
Preference number: 5 (lower is better)
Translates to: TSLTTAHRRPWPMAIFPRHFHRY*LANVES
Trigger: GCTTTCTACATTGGCTAACAAATACCTGTGAAAATG...CCTGGGAAAGATGGCCATAGGCCATGGCCTCCTGTGTGCTGTGGTCAAACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS TCA 90 bp TCTCAATGTCAAATATTTCCATGGTGTTGTCCAGCAGCTTTACTCTaGGGTGCAGGTGCTTCTCTTGCATTCTGGGCAAGAGAGTCTGCC +
Preference number: 5 (lower is better)
Translates to: SQCQIFPWCCPAALL*GAGASLAFWARESA
Trigger: GGCAGACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGTAAAGCTGCTGGACAACACCATGGAAATATTTGACATTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464142.5
CDS GCA 90 bp GCTGGACAGACAGGAATGGAGCAGAATGCCCAGAAAGAACTCGAGTaGAAAGACACAGGCTTCCATTTGATAAAGTCTGAGATCAGTGAG +
Preference number: 5 (lower is better)
Translates to: AGQTGMEQNAQKELE*KDTGFHLIKSEISE
Trigger: CTCACTGATCTCAGACTTTATCAAATGGAAGCCTGTGTCTTTGCACTCGAGTTCTTTCTGGGCATTCTGCTCCATTCCTGTCTGTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS-3UTR CAA 90 bp TGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATAGTCCCGACCAGTTGAAAGTGTaGATTTTGGTGGTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: CSSSSGAISTQNSKTYSPDQLKV*ILVVPW
Trigger: CCAGGGCACCACCAAAATCAACACTTTCAACTGGTC...GGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CAA 90 bp AGGCTGAATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTACGGACGTGTGGGTCTaGCTGTGCCTTCTTTCATAT +
Preference number: 5 (lower is better)
Translates to: RLNAVLQVGLSQHRTAKPTDVWV*LCLLSY
Trigger: ATATGAAAGAAGGCACAGCAAGACCCACACGTCCGT...AGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CAA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGACGGACGTGTGGGTCTaGCTGTGCCTTCTTTCATAT +
Preference number: 5 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVTDVWV*LCLLSY
Trigger: ATATGAAAGAAGGCACAGCAAGACCCACACGTCCGT...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CAA 90 bp CCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCAACTTCTTACAGCGTTaGGTAGCCTTTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: PIYFPLEGMLGSNKLDGPNFLQR*VAFSSS
Trigger: AGAACTGGAAAAGGCTACCAAACGCTGTAAGAAGTT...GGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264042.8
CDS-3UTR CAA 90 bp AACCACAGCACATGTGAAGTGCTACAATTACTCCTCAGAGCGGTGGAATGGCAGAAGTCATCCCCACCATaGTCATTTTTACAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: NHSTCEVLQLLLRAVEWQKSSPP*SFLQAA
Trigger: CGCTGCTTGTAAAAATGACAATGGTGGGGATGACTT...CTGCCATTCCACCGCTCTGAGGAGTAATTGTAGCACTTCACATGTGCTGTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CAA 90 bp TCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCTGTGTGGCCTCAGGCTGAATaGCTCCTGGAGTTTTGCTAT +
Preference number: 5 (lower is better)
Translates to: SAYFFQFQGLSGHTSQAVWPQAE*LLEFCY
Trigger: ATAGCAAAACTCCAGGAGCAATTCAGCCTGAGGCCA...CACAGCCTGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS TCA 90 bp CCAGTTGAATCTTGGTTCCTTCCCTGTCAGAAGCCATGTGAAATCTaGTGCCGTACATTTCCAACTTTCGAGCAATTTCGAGCACCTGGA +
Preference number: 5 (lower is better)
Translates to: PVESWFLPCQKPCEI*CRTFPTFEQFRAPG
Trigger: TCCAGGTGCTCGAAATTGCTCGAAAGTTGGAAATGTACGGCATCAGATTTCACATGGCTTCTGACAGGGAAGGAACCAAGATTCAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000471447.5
ENST00000485051.1
ENST00000627550.2
CDS CCA 90 bp CACCAAACAGTGACTATCTCATATGACACCACTAATGAGAGAGAGTaGACTGATGCTGGACAGACAGGAATGGAGCAGAATGCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: HQTVTISYDTTNERE*TDAGQTGMEQNAQK
Trigger: TTTCTGGGCATTCTGCTCCATTCCTGTCTGTCCAGCATCAGTCCACTCTCTCTCATTAGTGGTGTCATATGAGATAGTCACTGTTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS-3UTR CAA 90 bp GCTGAATGCAGTTCTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATAAATACTCGTTCACTTaGAGGTGCTCTCGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: AECSSSSGAISTQNSKTYKYSFT*RCSRSS
Trigger: GCTGGACCGAGAGCACCTCAAAGTGAACGAGTATTT...ATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAGAACTGCATTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS TCA 90 bp GTGGCTGGTCCCTGCAACTCCTTTGCTTGTGTACAGCAACATATCTaGGAACTGAGAAGCAGCAAGCTTTACATCCATGAACTTCACAAA +
Preference number: 5 (lower is better)
Translates to: VAGPCNSFACVQQHI*ELRSSKLYIHELHK
Trigger: TTTGTGAAGTTCATGGATGTAAAGCTTGCTGCTTCTCAGTTCTCAGATATGTTGCTGTACACAAGCAAAGGAGTTGCAGGGACCAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486736.5
CDS TCA 90 bp TTCGTTGATGACTGCCTTTTGTGTGGGCTTTGGAGGGCCCTTCCCTaGGTAAAAAGAAACAAAGTCATCCTAAACATGGTGAAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: FVDDCLLCGLWRALP*VKRNKVILNMVKAC
Trigger: GCAAGCTTTCACCATGTTTAGGATGACTTTGTTTCTTTTTACTCAGGGAAGGGCCCTCCAAAGCCCACACAAAAGGCAGTCATCAACGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496470.1
CDS-3UTR CAA 90 bp CTTCAAGTGGGGCTATCTCAACACAGAACAGCAAAACCTATAGTCCCTTGGGAACTTAGTTTACGGACCTaGGACCAGTTGAAAGTGTTG +
Preference number: 5 (lower is better)
Translates to: LQVGLSQHRTAKPIVPWELSLRT*DQLKVL
Trigger: CAACACTTTCAACTGGTCCAAGGTCCGTAAACTAAG...TTCCCAAGGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CAA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCAGGCATACTCAAGGTTTaGTGTAGCGCAGTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: SQICILLSISGFIRPHLSGILKV*CSAVAG
Trigger: TCCAGCCACTGCGCTACACAAAACCTTGAGTATGCC...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CAA 90 bp AAGCACAAAGCAGAAACAAAAGCAGAGCCCAATGCTGCTGCAGGGCACTATGGCATTGCTCCTGGAGTTTaGCTATTTAACCACTGTAAA +
Preference number: 5 (lower is better)
Translates to: KHKAETKAEPNAAAGHYGIAPGV*LFNHCK
Trigger: TTTACAGTGGTTAAATAGCAAAACTCCAGGAGCAAT...GCCATAGTGCCCTGCAGCAGCATTGGGCTCTGCTTTTGTTTCTGCTTTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS GCA 90 bp TTCACAAACAAGTGTCTTAATAGTCAGACCAACTTGGACTCTGGCTaGTCATCATGTGGACATCAGATCTGTGCAGCTTGCTGGAGATTT +
Preference number: 5 (lower is better)
Translates to: FTNKCLNSQTNLDSG*SSCGHQICAACWRF
Trigger: AAATCTCCAGCAAGCTGCACAGATCTGATGTCCACATGATGAGCAGCCAGAGTCCAAGTTGGTCTGACTATTAAGACACTTGTTTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486736.5
CDS-3UTR CAA 90 bp AGTGGGGCTATCTCAACACAGAACAGCAAAACCTATAGTCCCTTGGGAACTCTAAATATTTCCATGGTGTaGTCCAGCAGCTTTACTCTG +
Preference number: 5 (lower is better)
Translates to: SGAISTQNSKTYSPLGTLNISMV*SSSFTL
Trigger: CAGAGTAAAGCTGCTGGACAACACCATGGAAATATT...TAGAGTTCCCAAGGGACTATAGGTTTTGCTGTTCTGTGTTGAGATAGCCCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS-3UTR CAA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCACTACCCAACACTGGCTaGAAGAAGAGCCACAAAGCA +
Preference number: 5 (lower is better)
Translates to: SQICILLSISGFIRPHLSLPNTG*KKSHKA
Trigger: TGCTTTGTGGCTCTTCTTCAAGCCAGTGTTGGGTAG...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CAA 90 bp AGTCAAATCTGCATACTTCTTTCAATTTCAGGGTTTATCAGGCCACACCTCTCACGTAGTGGCATGTTATaGAGGGAGCTGTTTTCAGAC +
Preference number: 5 (lower is better)
Translates to: SQICILLSISGFIRPHLSRSGML*RELFSD
Trigger: GTCTGAAAACAGCTCCCTCAATAACATGCCACTACG...TGAGAGGTGTGGCCTGATAAACCCTGAAATTGAAAGAAGTATGCAGATTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CAA 90 bp ACACACAACAGCTGGGAACACACATGCTATGTATGTCACCATGTGATCACAACCTGGGTTTTTATCTATTaGCTCTCCTGGAGTCAAATT +
Preference number: 5 (lower is better)
Translates to: THNSWEHTCYVCHHVITTWVFIY*LSWSQI
Trigger: AATTTGACTCCAGGAGAGCAAATAGATAAAAACCCA...GGTTGTGATCACATGGTGACATACATAGCATGTGTGTTCCCAGCTGTTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS-3UTR CAA 90 bp TGTCTTGTTAAGGTGGAAAAGAGCAACGTCAGTGCCTCATTAACTGTTACAAGTGGGAACAAGCATACCTaGAAGACATATGTATTGGCA +
Preference number: 5 (lower is better)
Translates to: CLVKVEKSNVSASLTVTSGNKHT*KTYVLA
Trigger: TGCCAATACATATGTCTTCAAGGTATGCTTGTTCCC...ACTTGTAACAGTTAATGAGGCACTGACGTTGCTCTTTTCCACCTTAACAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS TCA 90 bp ACAGCAACATATCTGAGAACTGAGAAGCAGCAAGCTTTACATCCATaGACTTCACAAACAAGTGTCTTAATAGTCAGACCAACTTGGACT +
Preference number: 5 (lower is better)
Translates to: TATYLRTEKQQALHP*TSQTSVLIVRPTWT
Trigger: AGTCCAAGTTGGTCTGACTATTAAGACACTTGTTTGTGAAGTTCATGGATGTAAAGCTTGCTGCTTCTCAGTTCTCAGATATGTTGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486736.5
CDS CCA 90 bp CATTCTACCAGGTTTAAACGCTTCCACACTTGTGTCAGTAATACCTaGCCATCGCATTTAGGCTGTTATTTTTCAAACCTCAATGTCAAA +
Preference number: 5 (lower is better)
Translates to: HSTRFKRFHTCVSNT*PSHLGCYFSNLNVK
Trigger: TTTGACATTGAGGTTTGAAAAATAACAGCCTAAATGCGATGGCCAGGTATTACTGACACAAGTGTGGAAGCGTTTAAACCTGGTAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478489.5
CDS TCA 90 bp TGTAGGCCATATGTTTCAGGAGGGCAGAAACCATATTATGAACTTTaGTCAATAATTAGATCACCACACTCTTGGAGACTTTCAACAGAA +
Preference number: 5 (lower is better)
Translates to: CRPYVSGGQKPYYEL*SIIRSPHSWRLSTE
Trigger: TTCTGTTGAAAGTCTCCAAGAGTGTGGTGATCTAATTATTGATCAAAGTTCATAATATGGTTTCTGCCCTCCTGAAACATATGGCCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479427.5
CDS TCA 90 bp TTATCGGAGACACGGGAATCCTCTGTACTATTACTGCAACTTCTGTaGGTCTTAATCACGTCAAAAGAAAGTGTTACAAAAGATTATTTT +
Preference number: 5 (lower is better)
Translates to: LSETRESSVLLLQLL*VLITSKESVTKDYF
Trigger: AAAATAATCTTTTGTAACACTTTCTTTTGACGTGATTAAGACTCACAGAAGTTGCAGTAATAGTACAGAGGATTCCCGTGTCTCCGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445489.1
CDS GCA 90 bp CCTTGTAAAGGAACCCAGAGTGGTCAAGATGGGTTTTTATCTATTTaGTCTCCTGGAGTCAAATTCTTTAAATTGTTCTGTAAATCAAAA +
Preference number: 5 (lower is better)
Translates to: PCKGTQSGQDGFLSI*SPGVKFFKLFCKSK
Trigger: TTTTGATTTACAGAACAATTTAAAGAATTTGACTCCAGGAGAGCAAATAGATAAAAACCCATCTTGACCACTCTGGGTTCCTTTACAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS GCA 72 bp GGGCTGGGCCGATGGTGTGTCGGGGCCTCCAGCCACTaGTCCACTGCGCCTCTCTGCAGCTGGACTCTTGAC +
Preference number: 6 (lower is better)
Translates to: GLGRWCVGASSH*STAPLCSWTLD
Trigger: GTCAAGAGTCCAGCTGCAGAGAGGCGCAGTGGAGCAGTGGCTGGAGGCCCCGACACACCATCGGCCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000413432.2
ENST00000627550.2
CDS TCA 72 bp GGTATCCCTGCGCCATGGCAGCTGCACCCCAGGGGGTaGGCCATGGGCCAGAGGGCACCCAAATACTCACCG +
Preference number: 6 (lower is better)
Translates to: GIPAPWQLHPRG*AMGQRAPKYSP
Trigger: CGGTGAGTATTTGGGTGCCCTCTGGCCCATGGCTCACCCCCTGGGGTGCAGCTGCCATGGCGCAGGGATACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS CCA 72 bp GGCCTGGCAGTGCAGGGGCCGTGTCACCGCCACTCTTaGCTGCTTGGATCGCGGAGTTCAGGTCCAGCATCC +
Preference number: 6 (lower is better)
Translates to: GLAVQGPCHRHS*LLGSRSSGPAS
Trigger: GGATGCTGGACCTGAACTCCGCGATCCAAGCAGCCAAGAGTGGCGGTGACACGGCCCCTGCACTGCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000444371.1
ENST00000470617.1
ENST00000486736.5
CDS CAA 72 bp CGGCCTGGCAGTGCAGGGGCCGTGTCACCGCCACTCTaGGCTGCTTGGATCGCGGAGTTCAGGTCCAGCATC +
Preference number: 6 (lower is better)
Translates to: RPGSAGAVSPPL*AAWIAEFRSSI
Trigger: GATGCTGGACCTGAACTCCGCGATCCAAGCAGCCAAGAGTGGCGGTGACACGGCCCCTGCACTGCCAGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000444371.1
ENST00000470617.1
ENST00000486736.5
CDS GCA 72 bp TGTTGGCCCGGTGCTGGCCATGCCCCTCCAGGGAGCTaGGGACACCCCGAGCATCATCTTCTGACTCCTGCT +
Preference number: 6 (lower is better)
Translates to: CWPGAGHAPPGS*GHPEHHLLTPA
Trigger: AGCAGGAGTCAGAAGATGATGCTCGGGGTGTCCGCAGCTCCCTGGAGGGGCATGGCCAGCACCGGGCCAACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000444371.1
ENST00000470617.1
ENST00000486736.5
CDS GCA 72 bp GTCTCCCGTGTGGGGGCTGAAGGGGTGTTACCAGAGTaGCAGCCTCTGCTCCACCTCGCGCAGGAAGCCTCT +
Preference number: 6 (lower is better)
Translates to: VSRVGAEGVLPE*QPLLHLAQEAS
Trigger: AGAGGCTTCCTGCGCGAGGTGGAGCAGAGGCTGGCACTCTGGTAACACCCCTTCAGCCCCCACACGGGAGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473510.1
CDS TCA 72 bp AGACTCAGGGGGCTCTTCCGGCTGGAGGGAGAAGGCTaGGGACTCTTCGTGGAAAGGCCTGGACCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: RLRGLFRLEGEG*GLFVERPGPGW
Trigger: CCAGCCTGGTCCAGGCCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAGCCGGAAGAGCCCCCTGAGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000627550.2
CDS CCA 72 bp TGCCCAGGCTCAAGGGTGCTAACTCCCACAGGGGTCTaGGCACCCAAGCGCATCCCTGCAGTCTGCAGGACT +
Preference number: 6 (lower is better)
Translates to: CPGSRVLTPTGV*APKRIPAVCRT
Trigger: AGTCCTGCAGACTGCAGGGATGCGCTTGGGTGCCCAGACCCCTGTGGGAGTTAGCACCCTTGAGCCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000418082.1
ENST00000445489.1
ENST00000464142.5
ENST00000478489.5
ENST00000479427.5
ENST00000492868.1
ENST00000627550.2
CDS CCA 72 bp CCTGCACGATGCTTGGGGCCCTCCCGGCTGAGCTGCTaGCCCCCTGGATCACCTCCATCCACCTTTCAAATG +
Preference number: 6 (lower is better)
Translates to: PARCLGPSRLSC*PPGSPPSTFQM
Trigger: CATTTGAAAGGTGGATGGAGGTGATCCAGGGGGCCAGCAGCTCAGCCGGGAGGGCCCCAAGCATCGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264042.8
ENST00000412332.1
ENST00000470617.1
CDS CAA 90 bp GCGGCCTGGCAGTGCAGGGGCCGTGTCACCGCCACTCTTGGCTGCTaGGATCGCGGAGTTCAGGTCCAGCATCCACTTCTCTTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: AAWQCRGRVTATLGC*DRGVQVQHPLLFLQ
Trigger: CTGGAGAAAGAGAAGTGGATGCTGGACCTGAACTCCGCGATCCAAGCAGCCAAGAGTGGCGGTGACACGGCCCCTGCACTGCCAGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000444371.1
ENST00000470617.1
ENST00000486736.5
CDS CAA 90 bp CACACAGTGCGGCCTGGCAGTGCAGGGGCCGTGTCACCGCCACTCTaGGCTGCTTGGATCGCGGAGTTCAGGTCCAGCATCCACTTCTCT +
Preference number: 6 (lower is better)
Translates to: HTVRPGSAGAVSPPL*AAWIAEFRSSIHFS
Trigger: AGAGAAGTGGATGCTGGACCTGAACTCCGCGATCCAAGCAGCCAAGAGTGGCGGTGACACGGCCCCTGCACTGCCAGGCCGCACTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000444371.1
ENST00000470617.1
ENST00000486736.5
CDS GCA 72 bp TGGCAGTGCAGGGGCCGTGTCACCGCCACTCTTGGCTaGTTGGATCGCGGAGTTCAGGTCCAGCATCCACTT +
Preference number: 6 (lower is better)
Translates to: WQCRGRVTATLG*LDRGVQVQHPL
Trigger: AAGTGGATGCTGGACCTGAACTCCGCGATCCAAGCAGCCAAGAGTGGCGGTGACACGGCCCCTGCACTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000444371.1
ENST00000470617.1
ENST00000486736.5
CDS GCA 72 bp CATAGTCTTTGTGTATGCCATCGGCCTCCCTGGGGATaGTCACGCTGTAGCCCAGCAGCGGGAGGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: HSLCVCHRPPWG*SRCSPAAGGWP
Trigger: TGGCCAGCCTCCCGCTGCTGGGCTACAGCGTGAGCATCCCCAGGGAGGCCGATGGCATACACAAAGACTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000470617.1
CDS GCA 72 bp TCAGAAGGACCCAGCAGGCGCTGCATCCGGCTGGCCTaGGCCTTCACCTCAAATAGCTCCGAGGTGTCTGAG +
Preference number: 6 (lower is better)
Translates to: SEGPSRRCIRLA*AFTSNSSEVSE
Trigger: CTCAGACACCTCGGAGCTATTTGAGGTGAAGGCGCAGGCCAGCCGGATGCAGCGCCTGCTGGGTCCTTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS GCA 72 bp GACTCTACAAGAGGCCAAGGAGGACACTGGTATCCCTaGGCCATGGCAGCTGCACCCCAGGGGGTGAGCCAT +
Preference number: 6 (lower is better)
Translates to: DSTRGQGGHWYP*AMAAAPQGVSH
Trigger: ATGGCTCACCCCCTGGGGTGCAGCTGCCATGGCGCAGGGATACCAGTGTCCTCCTTGGCCTCTTGTAGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS GCA 72 bp TGGGGGCTGAAGGGGTGTTACCAGAGTGCCAGCCTCTaGTCCACCTCGCGCAGGAAGCCTCTGTGGAACTCA +
Preference number: 6 (lower is better)
Translates to: WGLKGCYQSASL*STSRRKPLWNS
Trigger: TGAGTTCCACAGAGGCTTCCTGCGCGAGGTGGAGCAGAGGCTGGCACTCTGGTAACACCCCTTCAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473510.1
CDS CCA 72 bp CATGGAGTACCTGTCTGGGCTGGACCGAGCAGACCCTaGAAGCTCACACAAAGGAGGGGCCACCAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: HGVPVWAGPSRP*KLTQRRGHQRL
Trigger: CAGCCTCTGGTGGCCCCTCCTTTGTGTGAGCTTCCAGGGTCTGCTCGGTCCAGCCCAGACAGGTACTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS CCA 72 bp TGGTCTCAGAAGGACCCAGCAGGCGCTGCATCCGGCTaGCCTGCGCCTTCACCTCAAATAGCTCCGAGGTGT +
Preference number: 6 (lower is better)
Translates to: WSQKDPAGAASG*PAPSPQIAPRC
Trigger: ACACCTCGGAGCTATTTGAGGTGAAGGCGCAGGCCAGCCGGATGCAGCGCCTGCTGGGTCCTTCTGAGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS CCA 72 bp GTGCACACAGACTCTACAAGAGGCCAAGGAGGACACTaGTATCCCTGCGCCATGGCAGCTGCACCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: VHTDSTRGQGGH*YPCAMAAAPQG
Trigger: CCCCTGGGGTGCAGCTGCCATGGCGCAGGGATACCAGTGTCCTCCTTGGCCTCTTGTAGAGTCTGTGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS TCA 72 bp GGCTGTGAGGCTGGCTTAGAGCCGCTACTACTCTCCTaGCCATTCAACCGCCAGCCTCACACAGTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: GCEAGLEPLLLS*PFNRQPHTVPG
Trigger: GCCTGGCACTGTGTGAGGCTGGCGGTTGAATGGTCAGGAGAGTAGTAGCGGCTCTAAGCCAGCCTCACAGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476799.1
CDS CCA 72 bp GAAATGCAGGGCTCAGACTCAGGGGGCTCTTCCGGCTaGAGGGAGAAGGCTGAGGACTCTTCGTGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: EMQGSDSGGSSG*REKAEDSSWKG
Trigger: GCCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAGCCGGAAGAGCCCCCTGAGTCTGAGCCCTGCATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000476799.1
ENST00000627550.2
CDS CCA 72 bp AGCGGTGATGATGAGTTGGTGTGGGAGTCTCCCGTGTaGGGGCTGAAGGGGTGTTACCAGAGTGCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: SGDDELVWESPV*GLKGCYQSASL
Trigger: GAGGCTGGCACTCTGGTAACACCCCTTCAGCCCCCACACGGGAGACTCCCACACCAACTCATCATCACCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473510.1
CDS TCA 72 bp CTCCAGGGAGCTGCGGACACCCCGAGCATCATCTTCTaGCTCCTGCTCCAGAGATACCTCGTTGGGGGATCT +
Preference number: 6 (lower is better)
Translates to: LQGAADTPSIIF*LLLQRYLVGGS
Trigger: AGATCCCCCAACGAGGTATCTCTGGAGCAGGAGTCAGAAGATGATGCTCGGGGTGTCCGCAGCTCCCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000444371.1
ENST00000470617.1
ENST00000486736.5
CDS TCA 72 bp GGGGAGGGGGATGGAGCGAGAAATGAGAAAGGGCTGTaGGGCTGGCTTAGAGCCGCTACTACTCTCCTGACC +
Preference number: 6 (lower is better)
Translates to: GEGDGARNEKGL*GWLRAATTLLT
Trigger: GGTCAGGAGAGTAGTAGCGGCTCTAAGCCAGCCTCACAGCCCTTTCTCATTTCTCGCTCCATCCCCCTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476799.1
CDS TCA 72 bp AGACTCAGGGGGCTCTTCCGGCTGGAGGGAGAAGGCTaGGGACTCTTCGTGGAAAGGCCTGGAAATGAACGG +
Preference number: 6 (lower is better)
Translates to: RLRGLFRLEGEG*GLFVERPGNER
Trigger: CCGTTCATTTCCAGGCCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAGCCGGAAGAGCCCCCTGAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476799.1
CDS TCA 72 bp ATGATGAGTTGGTGTGGGAGTCTCCCGTGTGGGGGCTaGAGGGGTGTTACCAGAGTGCCAGCCTCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: MMSWCGSLPCGG*RGVTRVPASAP
Trigger: TGGAGCAGAGGCTGGCACTCTGGTAACACCCCTTCAGCCCCCACACGGGAGACTCCCACACCAACTCATCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473510.1
CDS CCA 72 bp TGTTGGAGAAGAGCAGCGTCATCAGAGTCGCAGGCATaGCGTCCTCCTTCACCACTGCGCTGCGGAACCACA +
Preference number: 6 (lower is better)
Translates to: CWRRAASSESQA*RPPSPLRCGTT
Trigger: TGTGGTTCCGCAGCGCAGTGGTGAAGGAGGACGCCATGCCTGCGACTCTGATGACGCTGCTCTTCTCCAACA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000473510.1
ENST00000476799.1
ENST00000627550.2
CDS CCA 72 bp CTTGGAGGGGAAGGAGGCCCCGGATCCGGAAGTGGCTaGTCCCTGCAACTCCTTTGCTTGTGTACAGCAACA +
Preference number: 6 (lower is better)
Translates to: LGGEGGPGSGSG*SLQLLCLCTAT
Trigger: TGTTGCTGTACACAAGCAAAGGAGTTGCAGGGACCAGCCACTTCCGGATCCGGGGCCTCCTTCCCCTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264042.8
ENST00000486736.5
ENST00000491425.1
CDS CCA 72 bp ATGCTTGGGGCCCTCCCGGCTGAGCTGCTGGCCCCCTaGATCACCTCCATCCACCTTTCAAATGTGTACTTG +
Preference number: 6 (lower is better)
Translates to: MLGALPAELLAP*ITSIHLSNVYL
Trigger: CAAGTACACATTTGAAAGGTGGATGGAGGTGATCCAGGGGGCCAGCAGCTCAGCCGGGAGGGCCCCAAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264042.8
ENST00000412332.1
ENST00000470617.1
CDS CCA 72 bp TCTTCCGGCTGGAGGGAGAAGGCTGAGGACTCTTCGTaGAAAGGCCTGGAAATGAACGGGGAGGGGGATGGA +
Preference number: 6 (lower is better)
Translates to: SSGWREKAEDSS*KGLEMNGEGDG
Trigger: TCCATCCCCCTCCCCGTTCATTTCCAGGCCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAGCCGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476799.1
CDS TCA 72 bp CAGAGTGGAGGGAGAGAGCGAGTAAAAGGCATTCGCTaGAGATGGGGAGGCAGGAGTCCTCAATCCCTCGGG +
Preference number: 6 (lower is better)
Translates to: QSGGRERVKGIR*RWGGRSPQSLG
Trigger: CCCGAGGGATTGAGGACTCCTGCCTCCCCATCTTCAGCGAATGCCTTTTACTCGCTCTCTCCCTCCACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000413432.2
ENST00000627550.2
CDS GCA 72 bp ATGCCCACCAGGTCCCGCTGCAGCTCCGTTAGCTTCTaGAGGTTCTCCAGCCGGATGAGAATGTGCTGTAGT +
Preference number: 6 (lower is better)
Translates to: MPTRSRCSSVSF*RFSSRMRMCCS
Trigger: ACTACAGCACATTCTCATCCGGCTGGAGAACCTGCAGAAGCTAACGGAGCTGCAGCGGGACCTGGTGGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000491425.1
CDS CCA 72 bp TGGGGATGCTCACGCTGTAGCCCAGCAGCGGGAGGCTaGCCAGTGGGTAGTCATCCTGATGAGTTTTGTAGA +
Preference number: 6 (lower is better)
Translates to: WGCSRCSPAAGG*PVGSHPDEFCR
Trigger: TCTACAAAACTCATCAGGATGACTACCCACTGGCCAGCCTCCCGCTGCTGGGCTACAGCGTGAGCATCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000470617.1
CDS CAA 72 bp CTGGCGCATGTTCCTGAGCAGGATGTCCCCGATTCGTaGATGACTGCCTTTTGTGTGGGCTTTGGAGGGCCC +
Preference number: 6 (lower is better)
Translates to: LAHVPEQDVPDS*MTAFCVGFGGP
Trigger: GGGCCCTCCAAAGCCCACACAAAAGGCAGTCATCAACGAATCGGGGACATCCTGCTCAGGAACATGCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000422951.1
ENST00000496470.1
ENST00000627550.2
CDS GCA 72 bp AGCGAGAATCTCTTTGACTATGAAGTAGGCCTCGTCTaGAGGCACGCGCTTGTGTCTGGGCTCCTCGCAGTC +
Preference number: 6 (lower is better)
Translates to: SENLFDYEVGLV*RHALVSGLLAV
Trigger: GACTGCGAGGAGCCCAGACACAAGCGCGTGCCTGCAGACGAGGCCTACTTCATAGTCAAAGAGATTCTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000476799.1
ENST00000627550.2
CDS GCA 72 bp ACTGCTGGCAATGCTAGGTGGGGCTTGGAAGCCCAGTaGTGTCCAAGTGCACACAGACTCTACAAGAGGCCA +
Preference number: 6 (lower is better)
Translates to: TAGNARWGLEAQ*CPSAHRLYKRP
Trigger: TGGCCTCTTGTAGAGTCTGTGTGCACTTGGACAGCACTGGGCTTCCAAGCCCCACCTAGCATTGCCAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS TCA 72 bp CGTAATCTCCTATTTCCGACTGCAGGAGATGGGACGTaGGAAGGGCCGCTGTGGTGTCAGCACAGGTCAAAC +
Preference number: 6 (lower is better)
Translates to: RNLLFPTAGDGT*EGPLWCQHRSN
Trigger: GTTTGACCTGTGCTGACACCACAGCGGCCCTTCTCACGTCCCATCTCCTGCAGTCGGAAATAGGAGATTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000471447.5
ENST00000485051.1
ENST00000627550.2
CDS TCA 72 bp GTTATGCAGAGCTCCACACCTTGGGCGGTCACGTGGTaGACTCATGAGCAGCCTTTAACTGGCGCATGTTCC +
Preference number: 6 (lower is better)
Translates to: VMQSSTPWAVTW*THEQPLTGACS
Trigger: GGAACATGCGCCAGTTAAAGGCTGCTCATGAGTTCACCACGTGACCGCCCAAGGTGTGGAGCTCTGCATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422951.1
ENST00000627550.2
CDS CCA 72 bp TCATATCTACTGCCTCCATGGAGTACCTGTCTGGGCTaGACCGAGCAGACCCTGGAAGCTCACACAAAGGAG +
Preference number: 6 (lower is better)
Translates to: SYLLPPWSTCLG*TEQTLEAHTKE
Trigger: CTCCTTTGTGTGAGCTTCCAGGGTCTGCTCGGTCCAGCCCAGACAGGTACTCCATGGAGGCAGTAGATATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS TCA 72 bp GGCAGTGCTGCTGGCCAGGCAAATACTCGTTCACTTTaGGGTGCTCTCGGTCCAGCGTTTCATCGTAATCTC +
Preference number: 6 (lower is better)
Translates to: GSAAGQANTRSL*GALGPAFHRNL
Trigger: GAGATTACGATGAAACGCTGGACCGAGAGCACCTCAAAGTGAACGAGTATTTGCCTGGCCAGCAGCACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000471447.5
ENST00000485051.1
ENST00000627550.2
CDS TCA 72 bp CGTGGAGCTGGAACACCTTTAACTGGCGCATGTTCCTaGGCAGGATGTCCCCGATTCGTTGATGACTGCCTT +
Preference number: 6 (lower is better)
Translates to: RGAGTPLTGACS*AGCPRFVDDCL
Trigger: AAGGCAGTCATCAACGAATCGGGGACATCCTGCTCAGGAACATGCGCCAGTTAAAGGTGTTCCAGCTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS TCA 72 bp AGTCATCCCCACCATTGTCATTTTTACAAGCAGCGCTaGGCTCCCTACCGGCCCTCCCTGTGTCTAGGTCTA +
Preference number: 6 (lower is better)
Translates to: SHPHHCHFYKQR*APYRPSLCLGL
Trigger: TAGACCTAGACACAGGGAGGGCCGGTAGGGAGCTCAGCGCTGCTTGTAAAAATGACAATGGTGGGGATGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS TCA 72 bp AGAAGGCTGAGGACTCTTCGTGGAAAGGCCTGGAAATaGACGGGGAGGGGGATGGAGCGAGAAATGAGAAAG +
Preference number: 6 (lower is better)
Translates to: RRLRTLRGKAWK*TGRGMEREMRK
Trigger: CTTTCTCATTTCTCGCTCCATCCCCCTCCCCGTTCATTTCCAGGCCTTTCCACGAAGAGTCCTCAGCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476799.1
CDS CCA 72 bp CCGTACATTTCCAACTTTCGAGCAATTTCGAGCACCTaGAAATCCGACTCAGCAGGTGTCTGGCCCACGTGC +
Preference number: 6 (lower is better)
Translates to: PYISNFRAISST*KSDSAGVWPTC
Trigger: GCACGTGGGCCAGACACCTGCTGAGTCGGATTTCCAGGTGCTCGAAATTGCTCGAAAGTTGGAAATGTACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000471447.5
ENST00000485051.1
ENST00000627550.2
CDS CCA 72 bp GGAAGCCTCTGTGGAACTCATAGATGGGATCGATGTTaGAGAAGAGCAGCGTCATCAGAGTCGCAGGCATGG +
Preference number: 6 (lower is better)
Translates to: GSLCGTHRWDRC*RRAASSESQAW
Trigger: CCATGCCTGCGACTCTGATGACGCTGCTCTTCTCCAACATCGATCCCATCTATGAGTTCCACAGAGGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000422951.1
ENST00000473510.1
ENST00000476799.1
ENST00000627550.2
CDS CCA 72 bp CGCCTCAGAGCCTCCAGCAAAGAAGGAGATGTCTGCTaGGTCATCGTCTATGAACTCCTCAGATACCTGCAG +
Preference number: 6 (lower is better)
Translates to: RLRASSKEGDVC*VIVYELLRYLQ
Trigger: CTGCAGGTATCTGAGGAGTTCATAGACGATGACCCAGCAGACATCTCCTTCTTTGCTGGAGGCTCTGAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS CCA 72 bp TGTGTTCATATCTACTGCCTCCATGGAGTACCTGTCTaGGCTGGACCGAGCAGACCCTGGAAGCTCACACAA +
Preference number: 6 (lower is better)
Translates to: CVHIYCLHGVPV*AGPSRPWKLTQ
Trigger: TTGTGTGAGCTTCCAGGGTCTGCTCGGTCCAGCCCAGACAGGTACTCCATGGAGGCAGTAGATATGAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS CAA 90 bp GGAGGCCCCGGATCCGGAAGTGGCTGGTCCCTGCAACTCCTTTGCTaGTGTACAGCAACATATCTGAGAACTGAGAAGCAGCAAGCTTTA +
Preference number: 6 (lower is better)
Translates to: GGPGSGSGWSLQLLC*CTATYLRTEKQQAL
Trigger: TAAAGCTTGCTGCTTCTCAGTTCTCAGATATGTTGCTGTACACAAGCAAAGGAGTTGCAGGGACCAGCCACTTCCGGATCCGGGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486736.5
CDS GCA 72 bp ATGGTGTTGTCCAGCAGCTTTACTCTGAGGTGCAGGTaGTTCTCTTGCATTCTGGGCAAGAGAGTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: MVLSSSFTLRCR*FSCILGKRVCP
Trigger: TGGGCAGACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGTAAAGCTGCTGGACAACACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000418082.1
ENST00000445489.1
ENST00000464142.5
ENST00000473082.5
ENST00000478489.5
ENST00000479427.5
ENST00000492868.1
ENST00000627550.2
CDS GCA 72 bp TCTGCTGGGTCATCGTCTATGAACTCCTCAGATACCTaGAGCTGGGCATTTGTCAATGTGAAAGCAGGGGCC +
Preference number: 6 (lower is better)
Translates to: SAGSSSMNSSDT*SWAFVNVKAGA
Trigger: GGCCCCTGCTTTCACATTGACAAATGCCCAGCTGCAGGTATCTGAGGAGTTCATAGACGATGACCCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS GCA 72 bp TACTCTCCTGACCATTCAACCGCCAGCCTCACACAGTaGCAGGCGCTTCCTGTAAAATGTGTATGTACAGCC +
Preference number: 6 (lower is better)
Translates to: YSPDHSTASLTQ*QALPVKCVCTA
Trigger: GGCTGTACATACACATTTTACAGGAAGCGCCTGGCACTGTGTGAGGCTGGCGGTTGAATGGTCAGGAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476799.1
CDS GCA 72 bp CCCGGATCCGGAAGTGGCTGGTCCCTGCAACTCCTTTaGTTGTGTACAGCAACATATCTGAGAACTGAGAAG +
Preference number: 6 (lower is better)
Translates to: PGSGSGWSLQLL*LCTATYLRTEK
Trigger: CTTCTCAGTTCTCAGATATGTTGCTGTACACAAGCAAAGGAGTTGCAGGGACCAGCCACTTCCGGATCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486736.5
CDS GCA 72 bp GGACTCTGGCTGCTCATCATGTGGACATCAGATCTGTaGAGCTTGCTGGAGATTTTTGGCAGAAAGGGGACT +
Preference number: 6 (lower is better)
Translates to: GLWLLIMWTSDL*SLLEIFGRKGT
Trigger: AGTCCCCTTTCTGCCAAAAATCTCCAGCAAGCTGCACAGATCTGATGTCCACATGATGAGCAGCCAGAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486736.5
CDS CCA 72 bp TACTCCATTTTTGTGACCCCTGCTACATGCCCTTCGTaGAGCTGGAACACCTTTAACTGGCGCATGTTCCTG +
Preference number: 6 (lower is better)
Translates to: YSIFVTPATCPS*SWNTFNWRMFL
Trigger: CAGGAACATGCGCCAGTTAAAGGTGTTCCAGCTCCACGAAGGGCATGTAGCAGGGGTCACAAAAATGGAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373287.8
CDS CCA 72 bp ACAGACCACTCGTTATCACTTTCTTCCACCTGTGGGTaGGAGAAACGGTCCAAGTCTTGTGGCCAAGAAGGA +
Preference number: 6 (lower is better)
Translates to: TDHSLSLSSTCG*EKRSKSCGQEG
Trigger: TCCTTCTTGGCCACAAGACTTGGACCGTTTCTCCCACCCACAGGTGGAAGAAAGTGATAACGAGTGGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS CCA 72 bp TGGAACAGACCACTCGTTATCACTTTCTTCCACCTGTaGGTGGGAGAAACGGTCCAAGTCTTGTGGCCAAGA +
Preference number: 6 (lower is better)
Translates to: WNRPLVITFFHL*VGETVQVLWPR
Trigger: TCTTGGCCACAAGACTTGGACCGTTTCTCCCACCCACAGGTGGAAGAAAGTGATAACGAGTGGTCTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS CAA 72 bp CCCCGGATCCGGAAGTGGCTGGTCCCTGCAACTCCTTaGCTTGTGTACAGCAACATATCTGAGAACAGAAAA +
Preference number: 6 (lower is better)
Translates to: PRIRKWLVPATP*LVYSNISENRK
Trigger: TTTTCTGTTCTCAGATATGTTGCTGTACACAAGCAAAGGAGTTGCAGGGACCAGCCACTTCCGGATCCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000491425.1
CDS TCA 72 bp ATAGCTCCGAGGTGTCTGAGGGGTGTGCGTTCCCATTaGAGTCACTTTCCTCCTCAAATGCAAAACCGTCTT +
Preference number: 6 (lower is better)
Translates to: IAPRCLRGVRSH*SHFPPQMQNRL
Trigger: AAGACGGTTTTGCATTTGAGGAGGAAAGTGACTTCAATGGGAACGCACACCCCTCAGACACCTCGGAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS GCA 72 bp CCCGGATCCGGAAGTGGCTGGTCCCTGCAACTCCTTTaGTTGTGTACAGCAACATATCTGAGAACAGAAAAA +
Preference number: 6 (lower is better)
Translates to: PGSGSGWSLQLL*LCTATYLRTEK
Trigger: TTTTTCTGTTCTCAGATATGTTGCTGTACACAAGCAAAGGAGTTGCAGGGACCAGCCACTTCCGGATCCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000491425.1
CDS CCA 72 bp TTTGGTAGGTCTGCAGTCAGAGCTCGAACGGACGTGTaGGTCTTGCTGTGCCTTCTTTCATATGGAATTCTC +
Preference number: 6 (lower is better)
Translates to: FGRSAVRARTDV*VLLCLLSYGIL
Trigger: GAGAATTCCATATGAAAGAAGGCACAGCAAGACCCACACGTCCGTTCGAGCTCTGACTGCAGACCTACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000413432.2
ENST00000627550.2
CDS CCA 72 bp ATGAGAGAGAGTGGACTGATGCTGGACAGACAGGAATaGAGCAGAATGCCCAGAAAGAACTCGAGTGCAAAG +
Preference number: 6 (lower is better)
Translates to: MRESGLMLDRQE*SRMPRKNSSAK
Trigger: CTTTGCACTCGAGTTCTTTCTGGGCATTCTGCTCCATTCCTGTCTGTCCAGCATCAGTCCACTCTCTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS CAA 72 bp GAAGGAAATGAGCCTGTGGTAAAGTCATCCCCACCATaGTCATTTTTACAAGCAGCGCTGAGCTCCCTACCG +
Preference number: 6 (lower is better)
Translates to: EGNEPVVKSSPP*SFLQAALSSLP
Trigger: CGGTAGGGAGCTCAGCGCTGCTTGTAAAAATGACAATGGTGGGGATGACTTTACCACAGGCTCATTTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS CAA 72 bp AATAGCTCCGAGGTGTCTGAGGGGTGTGCGTTCCCATaGAAGTCACTTTCCTCCTCAAATGCAAAACCGTCT +
Preference number: 6 (lower is better)
Translates to: NSSEVSEGCAFP*KSLSSSNAKPS
Trigger: AGACGGTTTTGCATTTGAGGAGGAAAGTGACTTCAATGGGAACGCACACCCCTCAGACACCTCGGAGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS CAA 90 bp TTCACCTCAAATAGCTCCGAGGTGTCTGAGGGGTGTGCGTTCCCATaGAAGTCACTTTCCTCCTCAAATGCAAAACCGTCTTCTGTGTTC +
Preference number: 6 (lower is better)
Translates to: FTSNSSEVSEGCAFP*KSLSSSNAKPSSVF
Trigger: GAACACAGAAGACGGTTTTGCATTTGAGGAGGAAAGTGACTTCAATGGGAACGCACACCCCTCAGACACCTCGGAGCTATTTGAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS TCA 72 bp CTGCCACCACGATTGTTTTCTGAGCCGCGTAGATGGTaGAACAGTGTGGAACAGACCACTCGTTATCACTTT +
Preference number: 6 (lower is better)
Translates to: LPPRLFSEPRRW*NSVEQTTRYHF
Trigger: AAAGTGATAACGAGTGGTCTGTTCCACACTGTTTCACCATCTACGCGGCTCAGAAAACAATCGTGGTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000444371.1
ENST00000470617.1
ENST00000486736.5
CDS CCA 72 bp AGGTTTAAACGCTTCCACACTTGTGTCAGTAATACCTaGCCATCGCATTTAGGCTCCTTTCCAGTGTGGACG +
Preference number: 6 (lower is better)
Translates to: RFKRFHTCVSNT*PSHLGSFPVWT
Trigger: CGTCCACACTGGAAAGGAGCCTAAATGCGATGGCCAGGTATTACTGACACAAGTGTGGAAGCGTTTAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464142.5
ENST00000467260.1
CDS CAA 72 bp AAGCTTAGTTTACGGACCTTGGACCAGTTGAAAGTGTaGATTTTGGTGGTGCCCTGGAACACGAGTACACCC +
Preference number: 6 (lower is better)
Translates to: KLSLRTLDQLKV*ILVVPWNTSTP
Trigger: GGGTGTACTCGTGTTCCAGGGCACCACCAAAATCAACACTTTCAACTGGTCCAAGGTCCGTAAACTAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000471447.5
ENST00000485051.1
ENST00000627550.2
CDS CAA 72 bp AGGTCTGCAGTCAGAGCTCGAACGGACGTGTGGGTCTaGCTGTGCCTTCTTTCATATGGAATTCTCTTCATT +
Preference number: 6 (lower is better)
Translates to: RSAVRARTDVWV*LCLLSYGILFI
Trigger: AATGAAGAGAATTCCATATGAAAGAAGGCACAGCAAGACCCACACGTCCGTTCGAGCTCTGACTGCAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000413432.2
ENST00000627550.2
CDS CAA 90 bp TGCAGCTCAAACTCCTTGTACACTGCCTCCAACTTCTTACAGCGTTaGGTAGCCTTTTCCAGTTCTGTTAGGACCTCGTCATGTCTTTGG +
Preference number: 6 (lower is better)
Translates to: CSSNSLYTASNFLQR*VAFSSSVRTSSCLW
Trigger: CCAAAGACATGACGAGGTCCTAACAGAACTGGAAAAGGCTACCAAACGCTGTAAGAAGTTGGAGGCAGTGTACAAGGAGTTTGAGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000496470.1
CDS TCA 72 bp CAAATATTTCCATGGTGTTGTCCAGCAGCTTTACTCTaGGGTGCAGGTGCTTCTCTTGCATTCTGGGCAAGA +
Preference number: 6 (lower is better)
Translates to: QIFPWCCPAALL*GAGASLAFWAR
Trigger: TCTTGCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGTAAAGCTGCTGGACAACACCATGGAAATATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000418082.1
ENST00000445489.1
ENST00000464142.5
ENST00000473082.5
ENST00000478489.5
ENST00000479427.5
ENST00000492868.1
ENST00000627550.2
CDS GCA 72 bp AAGTGTCTTAATAGTCAGACCAACTTGGACTCTGGCTaGTCATCATGTGGACATCAGATCTGTGCAGCTTGC +
Preference number: 6 (lower is better)
Translates to: KCLNSQTNLDSG*SSCGHQICAAC
Trigger: GCAAGCTGCACAGATCTGATGTCCACATGATGAGCAGCCAGAGTCCAAGTTGGTCTGACTATTAAGACACTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486736.5
CDS CCA 72 bp GATTGTTTTCTGAGCCGCGTAGATGGTGAAACAGTGTaGAACAGACCACTCGTTATCACTTTCTTCCACCAG +
Preference number: 6 (lower is better)
Translates to: DCFLSRVDGETV*NRPLVITFFHQ
Trigger: CTGGTGGAAGAAAGTGATAACGAGTGGTCTGTTCCACACTGTTTCACCATCTACGCGGCTCAGAAAACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000486736.5
CDS CCA 72 bp GATTGTTTTCTGAGCCGCGTAGATGGTGAAACAGTGTaGAACAGACCACTCGTTATCACTTTCTTCCACCTG +
Preference number: 6 (lower is better)
Translates to: DCFLSRVDGETV*NRPLVITFFHL
Trigger: CAGGTGGAAGAAAGTGATAACGAGTGGTCTGTTCCACACTGTTTCACCATCTACGCGGCTCAGAAAACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS CAA 72 bp AACTCCTTGTACACTGCCTCCAACTTCTTACAGCGTTaGGTAGCCTTTTCCAGTTCTGTTAGGACCTCGTCA +
Preference number: 6 (lower is better)
Translates to: NSLYTASNFLQR*VAFSSSVRTSS
Trigger: TGACGAGGTCCTAACAGAACTGGAAAAGGCTACCAAACGCTGTAAGAAGTTGGAGGCAGTGTACAAGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264042.8
ENST00000496470.1
CDS GCA 72 bp GTGTGCGTTCCCATTGAAGTCACTTTCCTCCTCAAATaGAAAACCGTCTTCTGTGTTCATATCTACTGCCTC +
Preference number: 6 (lower is better)
Translates to: VCVPIEVTFLLK*KTVFCVHIYCL
Trigger: GAGGCAGTAGATATGAACACAGAAGACGGTTTTGCATTTGAGGAGGAAAGTGACTTCAATGGGAACGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS CCA 72 bp GTGACTATCTCATATGACACCACTAATGAGAGAGAGTaGACTGATGCTGGACAGACAGGAATGGAGCAGAAT +
Preference number: 6 (lower is better)
Translates to: VTISYDTTNERE*TDAGQTGMEQN
Trigger: ATTCTGCTCCATTCCTGTCTGTCCAGCATCAGTCCACTCTCTCTCATTAGTGGTGTCATATGAGATAGTCAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS CCA 72 bp GCCATTCTTGAGCTTCTCTGCAATGGCATAAATGCATaGTTTCCAAGGATGTCAAGAAATCTGGGAAGAGGC +
Preference number: 6 (lower is better)
Translates to: AILELLCNGINA*FPRMSRNLGRG
Trigger: GCCTCTTCCCAGATTTCTTGACATCCTTGGAAACCATGCATTTATGCCATTGCAGAGAAGCTCAAGAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479427.5
ENST00000492868.1
CDS CAA 72 bp GCAACAAATAGCGAGACCCCAGTAGGACTGAGTATTTaGAAACTCCATCCCGAAGTAGTCACATTCTACCAG +
Preference number: 6 (lower is better)
Translates to: ATNSETPVGLSI*KLHPEVVTFYQ
Trigger: CTGGTAGAATGTGACTACTTCGGGATGGAGTTTCAAAATACTCAGTCCTACTGGGGTCTCGCTATTTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467260.1
CDS CAA 72 bp CTCCAGCCTGGGCAACAAATAGCGAGACCTTCGTATTaGCCTAATGATGGGTTTCATAGGTTCAAGCCAAAT +
Preference number: 6 (lower is better)
Translates to: LQPGQQIARPSY*PNDGFHRFKPN
Trigger: ATTTGGCTTGAACCTATGAAACCCATCATTAGGCAAATACGAAGGTCTCGCTATTTGTTGCCCAGGCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473082.5
CDS CAA 90 bp ACATCCATGAACTTCACAAACAAGTGTCTTAATAGTCAGACCAACTaGGACTCTGGCTGCTCATCATGTGGACATCAGATCTGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: TSMNFTNKCLNSQTN*DSGCSSCGHQICAA
Trigger: AGCTGCACAGATCTGATGTCCACATGATGAGCAGCCAGAGTCCAAGTTGGTCTGACTATTAAGACACTTGTTTGTGAAGTTCATGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486736.5
CDS TCA 72 bp TCTTGGTTCCTTCCCTGTCAGAAGCCATGTGAAATCTaGTGCCGTACATTTCCAACTTTCGAGCAATTTCGA +
Preference number: 6 (lower is better)
Translates to: SWFLPCQKPCEI*CRTFPTFEQFR
Trigger: TCGAAATTGCTCGAAAGTTGGAAATGTACGGCATCAGATTTCACATGGCTTCTGACAGGGAAGGAACCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000471447.5
ENST00000485051.1
ENST00000627550.2
CDS GCA 72 bp AAAAGAAACAAAGTCATCCTAAACATGGTGAAAGCTTaGAGAAGGCACTGTAATCTGACGCAGGGTGACAGC +
Preference number: 6 (lower is better)
Translates to: KRNKVILNMVKA*RRHCNLTQGDS
Trigger: GCTGTCACCCTGCGTCAGATTACAGTGCCTTCTGCAAGCTTTCACCATGTTTAGGATGACTTTGTTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496470.1
CDS CAA 72 bp GCATGTAACAAGGAATTGTCCCACGATCAAGTAAGGTaGTTTGGGGAATGCAAGGATCGTTCGGCATTAGAA +
Preference number: 6 (lower is better)
Translates to: ACNKELSHDQVR*FGECKDRSALE
Trigger: TTCTAATGCCGAACGATCCTTGCATTCCCCAAACAACCTTACTTGATCGTGGGACAATTCCTTGTTACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS TCA 72 bp TACACCAACCAAGCCTCTCACTGGACATCAAAAATCTaGATCAACATAAGCAAGGGCAGGCAAAACATTGTC +
Preference number: 6 (lower is better)
Translates to: YTNQASHWTSKI*INISKGRQNIV
Trigger: GACAATGTTTTGCCTGCCCTTGCTTATGTTGATTCAGATTTTTGATGTCCAGTGAGAGGCTTGGTTGGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470617.1
CDS CCA 72 bp ACTTCACAAACAAGTGTCTTAATAGTCAGACCAACTTaGACTCTGGCTGCTCATCATGTGGACATCAGATCT +
Preference number: 6 (lower is better)
Translates to: TSQTSVLIVRPT*TLAAHHVDIRS
Trigger: AGATCTGATGTCCACATGATGAGCAGCCAGAGTCCAAGTTGGTCTGACTATTAAGACACTTGTTTGTGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486736.5
CDS CAA 72 bp CATAGGTTCAAGCCAAATCCAGTAGGACTGAGTATTTaGAAACTCCATCCCGAAGTAGTCACATTCTACCAG +
Preference number: 6 (lower is better)
Translates to: HRFKPNPVGLSI*KLHPEVVTFYQ
Trigger: CTGGTAGAATGTGACTACTTCGGGATGGAGTTTCAAAATACTCAGTCCTACTGGATTTGGCTTGAACCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000418082.1
ENST00000473082.5
ENST00000478489.5
ENST00000627550.2
CDS CAA 72 bp ACAGGTCAAACGCTCTTCCAGCAGGTCTCTCTTAAGTaGCAAGGCAAACAAGTATCTAGAAGAGAGTTCAAA +
Preference number: 6 (lower is better)
Translates to: TGQTLFQQVSLK*QGKQVSRREFK
Trigger: TTTGAACTCTCTTCTAGATACTTGTTTGCCTTGCAACTTAAGAGAGACCTGCTGGAAGAGCGTTTGACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471447.5
ENST00000485051.1
CDS CAA 72 bp AACTTCACAAACAAGTGTCTTAATAGTCAGACCAACTaGGACTCTGGCTGCTCATCATGTGGACATCAGATC +
Preference number: 6 (lower is better)
Translates to: NFTNKCLNSQTN*DSGCSSCGHQI
Trigger: GATCTGATGTCCACATGATGAGCAGCCAGAGTCCAAGTTGGTCTGACTATTAAGACACTTGTTTGTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486736.5
CDS CCA 72 bp AGGTTTAAACGCTTCCACACTTGTGTCAGTAATACCTaGCCATCGCATTTAGGCTCAATGTCAAATATTTCC +
Preference number: 6 (lower is better)
Translates to: RFKRFHTCVSNT*PSHLGSMSNIS
Trigger: GGAAATATTTGACATTGAGCCTAAATGCGATGGCCAGGTATTACTGACACAAGTGTGGAAGCGTTTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264042.8
ENST00000373287.8
ENST00000418082.1
ENST00000445489.1
ENST00000473082.5
ENST00000627550.2
CDS CCA 72 bp AGGTTTAAACGCTTCCACACTTGTGTCAGTAATACCTaGCCATCGCATTTAGGCTGTTATTTTTCAAACCTC +
Preference number: 6 (lower is better)
Translates to: RFKRFHTCVSNT*PSHLGCYFSNL
Trigger: GAGGTTTGAAAAATAACAGCCTAAATGCGATGGCCAGGTATTACTGACACAAGTGTGGAAGCGTTTAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478489.5
CDS TCA 72 bp TATCTGAGAACTGAGAAGCAGCAAGCTTTACATCCATaGACTTCACAAACAAGTGTCTTAATAGTCAGACCA +
Preference number: 6 (lower is better)
Translates to: YLRTEKQQALHP*TSQTSVLIVRP
Trigger: TGGTCTGACTATTAAGACACTTGTTTGTGAAGTTCATGGATGTAAAGCTTGCTGCTTCTCAGTTCTCAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486736.5
CDS GCA 72 bp GGAACCCAGAGTGGTCAAGATGGGTTTTTATCTATTTaGTCTCCTGGAGTCAAATTCTTTAAATTGTTCTGT +
Preference number: 6 (lower is better)
Translates to: GTQSGQDGFLSI*SPGVKFFKLFC
Trigger: ACAGAACAATTTAAAGAATTTGACTCCAGGAGAGCAAATAGATAAAAACCCATCTTGACCACTCTGGGTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413432.2
CDS TCA 72 bp TATGTTTCAGGAGGGCAGAAACCATATTATGAACTTTaGTCAATAATTAGATCACCACACTCTTGGAGACTT +
Preference number: 6 (lower is better)
Translates to: YVSGGQKPYYEL*SIIRSPHSWRL
Trigger: AAGTCTCCAAGAGTGTGGTGATCTAATTATTGATCAAAGTTCATAATATGGTTTCTGCCCTCCTGAAACATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479427.5
CDS CAA 72 bp AAAGGGAAATCCATTCTCTACATGCTGAAAATGCCTTaGCCAAAATCCAAGGTGTTATTTCTGATAATACCT +
Preference number: 6 (lower is better)
Translates to: KGKSILYMLKMP*PKSKVLFLIIP
Trigger: AGGTATTATCAGAAATAACACCTTGGATTTTGGCAAAGGCATTTTCAGCATGTAGAGAATGGATTTCCCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470617.1