RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FARP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000152767

Ensembl transcript IDs: ENST00000319562.11, ENST00000376581.9, ENST00000423063.2, ENST00000427404.5, ENST00000457029.3, ENST00000457431.1, ENST00000490389.1, ENST00000593548.1, ENST00000593990.1, ENST00000594346.1, ENST00000594657.1, ENST00000595366.5, ENST00000595380.5, ENST00000595437.5, ENST00000595817.5, ENST00000596256.1, ENST00000596467.5, ENST00000596545.5, ENST00000596580.2, ENST00000596613.5, ENST00000597596.1, ENST00000597777.1, ENST00000598346.5, ENST00000598389.5, ENST00000598698.5, ENST00000599040.5, ENST00000599151.5, ENST00000600032.5, ENST00000600190.1, ENST00000600380.1, ENST00000601009.1, ENST00000601133.5, ENST00000601361.1, ENST00000601656.5, ENST00000601762.5, ENST00000601853.5, ENST00000602015.5, ENST00000602171.5, ENST00000602263.5, ENST00000602272.5, ENST00000627049.2

Found 1911 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTCAGCTGCCCAGAGCCTGCAGCCTGGGGAGGTACTCAGCCTCTaGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT +
Preference number: 1 (lower is better)
Translates to: GSAAQSLQPGEVLSL*ETRAVDWVAGSSCV
Trigger: AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGTACCTCCCCAGGCTGCAGGCTCTGGGCAGCTGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 90 bp TTTGGAAGACTCCAGGGAGAAGTCCCCAGGCCTGGAGCTGCCGAGTaGCCAGGTCAGCGCCCTGGACTGCTTGCGCACTTGCTCACCGAG +
Preference number: 1 (lower is better)
Translates to: FGRLQGEVPRPGAAE*PGQRPGLLAHLLTE
Trigger: CTCGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGCTGACCTGGGCACTCGGCAGCTCCAGGCCTGGGGACTTCTCCCTGGAGTCTTCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp CTGGGGAGGTACTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTaGCTGGTAGCTCCTGCGTTTTTGAGCTGTGTCCTGGCTGGCTGC +
Preference number: 1 (lower is better)
Translates to: LGRYSASGRRGPWTG*LVAPAFLSCVLAGC
Trigger: GCAGCCAGCCAGGACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGTACCTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp CAGCCTGGGGAGGTACTCAGCCTCTGGGAGACGAGGGCCGTGGACTaGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGTCCTGGCTGG +
Preference number: 1 (lower is better)
Translates to: QPGEVLSLWETRAVD*VAGSSCVFELCPGW
Trigger: CCAGCCAGGACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGTACCTCCCCAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp GCCTGCAGCCTGGGGAGGTACTCAGCCTCTGGGAGACGAGGGCCGTaGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGTCCTG +
Preference number: 1 (lower is better)
Translates to: ACSLGRYSASGRRGP*TGWLVAPAFLSCVL
Trigger: CAGGACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGTACCTCCCCAGGCTGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 90 bp GAGACACTTTGGAAGACTCCAGGGAGAAGTCCCCAGGCCTGGAGCTaGCGAGTGCCCAGGTCAGCGCCCTGGACTGCTTGCGCACTTGCT +
Preference number: 1 (lower is better)
Translates to: ETLWKTPGRSPQAWS*RVPRSAPWTACALA
Trigger: AGCAAGTGCGCAAGCAGTCCAGGGCGCTGACCTGGGCACTCGGCAGCTCCAGGCCTGGGGACTTCTCCCTGGAGTCTTCCAAAGTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp AGAAGTCCCCAGGCCTGGAGCTGCCGAGTGCCCAGGTCAGCGCCCTaGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGT +
Preference number: 1 (lower is better)
Translates to: RSPQAWSCRVPRSAP*TACALAHRDDAVGG
Trigger: ACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGCTGACCTGGGCACTCGGCAGCTCCAGGCCTGGGGACTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 90 bp ACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTaGGGGGCGCTGGAAAGAATGGGGTTGAATTGGCCCTCGCCTCCG +
Preference number: 1 (lower is better)
Translates to: TERVRSWFSGGQVLW*GALERMGLNWPSPP
Trigger: CGGAGGCGAGGGCCAATTCAACCCCATTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CCA 90 bp TTTACTGTCACCAGTAGCCTCTCAGTGCCAGCCCTGAGCTGCTCCTaGCTCAGCTGCCCAGAGCCTGCAGCCTGGGGAGGTACTCAGCCT +
Preference number: 1 (lower is better)
Translates to: FTVTSSLSVPALSCS*LSCPEPAAWGGTQP
Trigger: AGGCTGAGTACCTCCCCAGGCTGCAGGCTCTGGGCAGCTGAGCCAGGAGCAGCTCAGGGCTGGCACTGAGAGGCTACTGGTGACAGTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 90 bp CCTGCATTAAGAGAGAGCCCAGGCACCAGGGCTACCACTGGAACCTaGCTCAGCGTCAACTGCTGCTGGTCTGTAGCCAGGCCCAGCCTT +
Preference number: 1 (lower is better)
Translates to: PALRESPGTRATTGT*LSVNCCWSVARPSL
Trigger: AAGGCTGGGCCTGGCTACAGACCAGCAGCAGTTGACGCTGAGGCAGGTTCCAGTGGTAGCCCTGGTGCCTGGGCTCTCTCTTAATGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp TCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATaGTGCGGGGCGCTGGAAAGAATGGGGTTGAATTGGCCCTCGCCT +
Preference number: 1 (lower is better)
Translates to: STERVRSWFSGGQVL*CGALERMGLNWPSP
Trigger: AGGCGAGGGCCAATTCAACCCCATTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CCA 90 bp TTCCAGGCCTGCATTAAGAGAGAGCCCAGGCACCAGGGCTACCACTaGAACCTGCCTCAGCGTCAACTGCTGCTGGTCTGTAGCCAGGCC +
Preference number: 1 (lower is better)
Translates to: FQACIKREPRHQGYH*NLPQRQLLLVCSQA
Trigger: GGCCTGGCTACAGACCAGCAGCAGTTGACGCTGAGGCAGGTTCCAGTGGTAGCCCTGGTGCCTGGGCTCTCTCTTAATGCAGGCCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 90 bp TGCCTCAGCGTCAACTGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTaGGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCCAGCCCTG +
Preference number: 1 (lower is better)
Translates to: CLSVNCCWSVARPSL*DGFTVTSSLSVPAL
Trigger: CAGGGCTGGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACAGACCAGCAGCAGTTGACGCTGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 90 bp TGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTaGGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGC +
Preference number: 1 (lower is better)
Translates to: CCLFPATPVRAPQRG*VPGSQVGRCYGAGR
Trigger: GCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CCA 90 bp CACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTaGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAATGGGGTTGAA +
Preference number: 1 (lower is better)
Translates to: HQSELHREGAFLVLR*AGAMVRGAGKNGVE
Trigger: TTCAACCCCATTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CCA 90 bp GTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTaGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGA +
Preference number: 1 (lower is better)
Translates to: VSSYTSQSSTERVRS*FSGGQVLWCGALER
Trigger: TCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CCA 90 bp GACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGTCCTGGCTaGCTGCTGCCAATGAGGTGGACACCAGTGTGGTTTGGGGTGCAC +
Preference number: 1 (lower is better)
Translates to: DWVAGSSCVFELCPG*LLPMRWTPVWFGVH
Trigger: GTGCACCCCAAACCACACTGGTGTCCACCTCATTGGCAGCAGCCAGCCAGGACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp GCCGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTaGAAGACTCCAGGGAGAAGTCCCCAGGCCTGGAGCTGCCGAGTG +
Preference number: 1 (lower is better)
Translates to: AVRVYSWLCVCDETL*KTPGRSPQAWSCRV
Trigger: CACTCGGCAGCTCCAGGCCTGGGGACTTCTCCCTGGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 90 bp GCCCAGGTCAGCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGATaGTGCAGTTGGAGGTTGCTGATCTGTGCGATTGCTGTAGCGGTT +
Preference number: 1 (lower is better)
Translates to: AQVSALDCLRTCSPR*CSWRLLICAIAVAV
Trigger: AACCGCTACAGCAATCGCACAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGCTGACCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp CCATCGAGAACAGGCAGACGTTTCCCGAGTAGGGGCCAAAGCCACTaGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTACCCCATGC +
Preference number: 1 (lower is better)
Translates to: PSRTGRRFPSRGQSH*KPCSLCSPTDTTPC
Trigger: GCATGGGGTAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTACTCGGGAAACGTCTGCCTGTTCTCGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CCA 90 bp TCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATaGCTGCCAAAACCACGGTGGCCATGGCTTAGACTTCCTGCCAGT +
Preference number: 1 (lower is better)
Translates to: SSFPAPEAPTERSPR*LPKPRWPWLRLPAS
Trigger: ACTGGCAGGAAGTCTAAGCCATGGCCACCGTGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 90 bp CAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAATGGGGTTaGATTGGCCCTCGCCTCCGCTTGTTTGAGACTCTCGTTAGAAAG +
Preference number: 1 (lower is better)
Translates to: QVGRCYGAGRWKEWG*IGPRLRLFETLVRK
Trigger: CTTTCTAACGAGAGTCTCAAACAAGCGGAGGCGAGGGCCAATTCAACCCCATTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR GCA 90 bp TGCCTCGCCAAGAAGGCGTGCCACGGTTCAGAACAATCCCCACTGTaGTACAGAGGAGACAGGACTCAGAAAACAGAGGGCCGAGTGGGA +
Preference number: 1 (lower is better)
Translates to: CLAKKACHGSEQSPL*YRGDRTQKTEGRVG
Trigger: TCCCACTCGGCCCTCTGTTTTCTGAGTCCTGTCTCCTCTGTAGCACAGTGGGGATTGTTCTGAACCGTGGCACGCCTTCTTGGCGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp CATCTTAGCCAAGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTaGATTAAGAGAGAGCCCAGGCACCAGGGCTACCACTGGAACCTG +
Preference number: 1 (lower is better)
Translates to: HLSQGSWLLCRHFQA*IKREPRHQGYHWNL
Trigger: CAGGTTCCAGTGGTAGCCCTGGTGCCTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTTGGCTAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 90 bp GGAGTCAATCACTGTCCGATGCATTTTACTCCACACACGCACACCTaGCCGGTAGTCCTCGCTCCCTCCTTAGCGTCCTTGGTCTGTGTG +
Preference number: 1 (lower is better)
Translates to: GVNHCPMHFTPHTHT*PVVLAPSLASLVCV
Trigger: CACACAGACCAAGGACGCTAAGGAGGGAGCGAGGACTACCGGGCAGGTGTGCGTGTGTGGAGTAAAATGCATCGGACAGTGATTGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp CCGATACAGCCACCTCCACTCTCAAAGGCCAACAGCGAGCACCCTTaGTGCACTGCACCTGGGAACACACATTTAGGGGACAGAGCAGTT +
Preference number: 1 (lower is better)
Translates to: PIQPPPLSKANSEHP*CTAPGNTHLGDRAV
Trigger: AACTGCTCTGTCCCCTAAATGTGTGTTCCCAGGTGCAGTGCAGCAAGGGTGCTCGCTGTTGGCCTTTGAGAGTGGAGGTGGCTGTATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 90 bp GGACAGGGCACCTGCTGTGTATGTGTGGCCGTGCGTGTGTACTCGTaGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCCAGGGAGA +
Preference number: 1 (lower is better)
Translates to: GQGTCCVCVAVRVYS*LCVCDETLWKTPGR
Trigger: TCTCCCTGGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGGCCACACATACACAGCAGGTGCCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 90 bp ACGCTCATCATTCTTCCCTCTTGGCCGGTCTGGGGAAGCTGGGTTTaGAGCATCTTGATCAGCTCTTCGGCAGAGCTGCTGAAAGGCAGT +
Preference number: 1 (lower is better)
Translates to: TLIILPSWPVWGSWV*SILISSSAELLKGS
Trigger: ACTGCCTTTCAGCAGCTCTGCCGAAGAGCTGATCAAGATGCTGCAAACCCAGCTTCCCCAGACCGGCCAAGAGGGAAGAATGATGAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp GCCACCTCCACTCTCAAAGGCCAACAGCGAGCACCCTTGCTGCACTaGACCTGGGAACACACATTTAGGGGACAGAGCAGTTGGAAGAAA +
Preference number: 1 (lower is better)
Translates to: ATSTLKGQQRAPLLH*TWEHTFRGQSSWKK
Trigger: TTTCTTCCAACTGCTCTGTCCCCTAAATGTGTGTTCCCAGGTGCAGTGCAGCAAGGGTGCTCGCTGTTGGCCTTTGAGAGTGGAGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp ATACAGCCACCTCCACTCTCAAAGGCCAACAGCGAGCACCCTTGCTaGACTGCACCTGGGAACACACATTTAGGGGACAGAGCAGTTGGA +
Preference number: 1 (lower is better)
Translates to: IQPPPLSKANSEHPC*TAPGNTHLGDRAVG
Trigger: TCCAACTGCTCTGTCCCCTAAATGTGTGTTCCCAGGTGCAGTGCAGCAAGGGTGCTCGCTGTTGGCCTTTGAGAGTGGAGGTGGCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 90 bp TTGCTGTGGGACCTTGCTTGGCGAGGGGGAAAATCTCTGGGTTTCTaGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGGTACATGAAG +
Preference number: 1 (lower is better)
Translates to: LLWDLAWRGGKSLGF*SGRVRAAAVDWYMK
Trigger: CTTCATGTACCAGTCAACAGCTGCTGCACGAACCCTCCCACTCCAGAAACCCAGAGATTTTCCCCCTCGCCAAGCAAGGTCCCACAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp TTCTTGGTTTGCTGTGGGACCTTGCTTGGCGAGGGGGAAAATCTCTaGGTTTCTGGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGGT +
Preference number: 1 (lower is better)
Translates to: FLVCCGTLLGEGENL*VSGVGGFVQQLLTG
Trigger: ACCAGTCAACAGCTGCTGCACGAACCCTCCCACTCCAGAAACCCAGAGATTTTCCCCCTCGCCAAGCAAGGTCCCACAGCAAACCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp ATCTCCATTCAGACGCAGCACATTTTACGTGCTCACTGGGCATCGTaGCTGGGGTTGACCCTATTTACCCTCGGGCGGGTCTGTAGCTAC +
Preference number: 1 (lower is better)
Translates to: ISIQTQHILRAHWAS*LGLTLFTLGRVCSY
Trigger: GTAGCTACAGACCCGCCCGAGGGTAAATAGGGTCAACCCCAGCCACGATGCCCAGTGAGCACGTAAAATGTGCTGCGTCTGAATGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 90 bp AATGAGTCACTAGAACAGATGATCTTTAGGGAAACCCTGGTCTCGTaGCCCCAGGTTGCTCGGGCTGAAGACTTGGCTCCTGGCCTCCTC +
Preference number: 1 (lower is better)
Translates to: NESLEQMIFRETLVS*PQVARAEDLAPGLL
Trigger: GAGGAGGCCAGGAGCCAAGTCTTCAGCCCGAGCAACCTGGGGTCACGAGACCAGGGTTTCCCTAAAGATCATCTGTTCTAGTGACTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp TCGGCAGAGCTGCTGAAAGGCAGTGGGAGGAGACTTTATCATCAGTaGGCCAAAGCCAGGCCTTTCTTCCCGCTTTGGGATTGGGCACAA +
Preference number: 1 (lower is better)
Translates to: SAELLKGSGRRLYHQ*AKARPFFPLWDWAQ
Trigger: TTGTGCCCAATCCCAAAGCGGGAAGAAAGGCCTGGCTTTGGCTCACTGATGATAAAGTCTCCTCCCACTGCCTTTCAGCAGCTCTGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp ACCGGGCGCCGAGAAGATGCTGAAGGCTTGGTTTCGAGGCTACCATaGTGTGATGTCTGTGTCGAGTGGCCAATCTACACCGAAATGATC +
Preference number: 1 (lower is better)
Translates to: TGRREDAEGLVSRLP*CDVCVEWPIYTEMI
Trigger: GATCATTTCGGTGTAGATTGGCCACTCGACACAGACATCACAGCATGGTAGCCTCGAAACCAAGCCTTCAGCATCTTCTCGGCGCCCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 90 bp CTCCCCAAAGTCAGAAGGTTTGGAGGGTGGCAGGGTAGATGCTGCTaGCTTTTCCTGACTGAGCTCTTCACAGTGACACTGAGGAGACCA +
Preference number: 1 (lower is better)
Translates to: LPKVRRFGGWQGRCC*LFLTELFTVTLRRP
Trigger: TGGTCTCCTCAGTGTCACTGTGAAGAGCTCAGTCAGGAAAAGCCAGCAGCATCTACCCTGCCACCCTCCAAACCTTCTGACTTTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 90 bp TCCATTCACGGTCTTAAGATAGCACGTCACAGAGCAGCCAGTGAGTaGCTGGTATCTGAAGGCCTGGGTCCCCTATTGAGTCAGGAGACC +
Preference number: 1 (lower is better)
Translates to: SIHGLKIARHRAASE*LVSEGLGPLLSQET
Trigger: GGTCTCCTGACTCAATAGGGGACCCAGGCCTTCAGATACCAGCCACTCACTGGCTGCTCTGTGACGTGCTATCTTAAGACCGTGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp TATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCTaGCCAGTACAAACAGCTGGGAAGCCCAAGGAGCACTCAAGACCA +
Preference number: 1 (lower is better)
Translates to: YSTRFETAWVRSDPG*PVQTAGKPKEHSRP
Trigger: TGGTCTTGAGTGCTCCTTGGGCTTCCCAGCTGTTTGTACTGGGCAGCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp AGTCTCCCCAAAGTCAGAAGGTTTGGAGGGTGGCAGGGTAGATGCTaGTGGCTTTTCCTGACTGAGCTCTTCACAGTGACACTGAGGAGA +
Preference number: 1 (lower is better)
Translates to: SLPKVRRFGGWQGRC*WLFLTELFTVTLRR
Trigger: TCTCCTCAGTGTCACTGTGAAGAGCTCAGTCAGGAAAAGCCAGCAGCATCTACCCTGCCACCCTCCAAACCTTCTGACTTTGGGGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp CTCCCGCCACCCTGCCATTCATCTAGAAGAGGTTTGGGTTTATGCTaGCCCCCTCAGACTGAAAACACCTCCAGTCATACAGCTCTCAAG +
Preference number: 1 (lower is better)
Translates to: LPPPCHSSRRGLGLC*PPQTENTSSHTALK
Trigger: CTTGAGAGCTGTATGACTGGAGGTGTTTTCAGTCTGAGGGGGGCAGCATAAACCCAAACCTCTTCTAGATGAATGGCAGGGTGGCGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 90 bp TCCCTTGTGATCGGGTCGCGTGATGAGCCCAGTGAGGCCCTGGTATaGTGGCACATCAGGGAGCTATCCTTGTTAGGACTCTTTTCAATA +
Preference number: 1 (lower is better)
Translates to: SLVIGSRDEPSEALV*WHIRELSLLGLFSI
Trigger: TATTGAAAAGAGTCCTAACAAGGATAGCTCCCTGATGTGCCACCATACCAGGGCCTCACTGGGCTCATCACGCGACCCGATCACAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp TGGCATTATAAAGCTTGTTTACACCTTGCAGTCTGTCACCTGCTTTaGAGGCACAGCCCCGGGCAACGGGGAGAGGAAACTGTGACTGAC +
Preference number: 1 (lower is better)
Translates to: WHYKACLHLAVCHLL*RHSPGQRGEETVTD
Trigger: GTCAGTCACAGTTTCCTCTCCCCGTTGCCCGGGGCTGTGCCTTCAAAGCAGGTGACAGACTGCAAGGTGTAAACAAGCTTTATAATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 90 bp GTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTaGTATGAACGGGGAGTCTCTGCAGTCGCCAGACAAATCATACTC +
Preference number: 1 (lower is better)
Translates to: VTVGEPLEGLGSNEY*YERGVSAVARQIIL
Trigger: GAGTATGATTTGTCTGGCGACTGCAGAGACTCCCCGTTCATACCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 90 bp CAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATaGTTTCATAGTGCTCTGCAGCCAGCAGGCTCACTAAACGCTCAT +
Preference number: 1 (lower is better)
Translates to: QEDIGITTGAGDYVP*FHSALQPAGSLNAH
Trigger: ATGAGCGTTTAGTGAGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR TCA 90 bp CAGGTTAGTAGCTCTCAAATCCTTCACCTCTTCCCCATGATTTCATaGCCCCTCCCGCCACCCTGCCATTCATCTAGAAGAGGTTTGGGT +
Preference number: 1 (lower is better)
Translates to: QVSSSQILHLFPMIS*PLPPPCHSSRRGLG
Trigger: ACCCAAACCTCTTCTAGATGAATGGCAGGGTGGCGGGAGGGGTCATGAAATCATGGGGAAGAGGTGAAGGATTTGAGAGCTACTAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp AGGCAAATGATTAACACACGGCAGGCTCTTCGTCCGTTTGCAAGTTaGTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGG +
Preference number: 1 (lower is better)
Translates to: RQMINTRQALRPFAS*CLFPATPVRAPQRG
Trigger: CCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACGAAGAGCCTGCCGTGTGTTAATCATTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR GCA 90 bp AATGAGGTGGACACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTTaGTGGGTTCTGATTTTCTTGGAAGTGCATCTGCCTTCCTTATCC +
Preference number: 1 (lower is better)
Translates to: NEVDTSVVWGALATS*WVLIFLEVHLPSLS
Trigger: GGATAAGGAAGGCAGATGCACTTCCAAGAAAATCAGAACCCAGCAAGAAGTGGCCAGTGCACCCCAAACCACACTGGTGTCCACCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp GAGGTGGACACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTTGCTaGGTTCTGATTTTCTTGGAAGTGCATCTGCCTTCCTTATCCAAT +
Preference number: 1 (lower is better)
Translates to: EVDTSVVWGALATSC*VLIFLEVHLPSLSN
Trigger: ATTGGATAAGGAAGGCAGATGCACTTCCAAGAAAATCAGAACCCAGCAAGAAGTGGCCAGTGCACCCCAAACCACACTGGTGTCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp CTTGTGATCGGGTCGCGTGATGAGCCCAGTGAGGCCCTGGTATGGTaGCACATCAGGGAGCTATCCTTGTTAGGACTCTTTTCAATAATT +
Preference number: 1 (lower is better)
Translates to: LVIGSRDEPSEALVW*HIRELSLLGLFSII
Trigger: AATTATTGAAAAGAGTCCTAACAAGGATAGCTCCCTGATGTGCCACCATACCAGGGCCTCACTGGGCTCATCACGCGACCCGATCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 90 bp AGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTaGGTTGGGAACATGGTGCTTCGTACCAATGAAAAATACCATCTT +
Preference number: 1 (lower is better)
Translates to: SGGGDGGGGGGGGSV*VGNMVLRTNEKYHL
Trigger: AAGATGGTATTTTTCATTGGTACGAAGCACCATGTTCCCAACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 90 bp TTGCAGCATCTTGATCAGCTCTTCGGCAGAGCTGCTGAAAGGCAGTaGGAGGAGACTTTATCATCAGTGAGCCAAAGCCAGGCCTTTCTT +
Preference number: 1 (lower is better)
Translates to: LQHLDQLFGRAAERQ*EETLSSVSQSQAFL
Trigger: AAGAAAGGCCTGGCTTTGGCTCACTGATGATAAAGTCTCCTCCCACTGCCTTTCAGCAGCTCTGCCGAAGAGCTGATCAAGATGCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp TGGGGAACTGTTTCCTTACGTGAGGCCGGCGGCATAAGTCAAAGATaGGTTTTGTCCTTGCGAATCACACAGATTGAGTCTGTGTTCCCC +
Preference number: 1 (lower is better)
Translates to: WGTVSLREAGGISQR*VLSLRITQIESVFP
Trigger: GGGGAACACAGACTCAATCTGTGTGATTCGCAAGGACAAAACTCATCTTTGACTTATGCCGCCGGCCTCACGTAAGGAAACAGTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 90 bp TGCACCTGGGAACACACATTTAGGGGACAGAGCAGTTGGAAGAAATaGGGTAACAGACTATGGTTCCATAAGAGAGCCTGCCTCGCCAAG +
Preference number: 1 (lower is better)
Translates to: CTWEHTFRGQSSWKK*GNRLWFHKRACLAK
Trigger: CTTGGCGAGGCAGGCTCTCTTATGGAACCATAGTCTGTTACCTCATTTCTTCCAACTGCTCTGTCCCCTAAATGTGTGTTCCCAGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp AGCCAAAGCCAGGCCTTTCTTCCCGCTTTGGGATTGGGCACAAGCTaGCTGTTAACCATGTACCGGTATTCAAGGCTTCAAAACAAACTC +
Preference number: 1 (lower is better)
Translates to: SQSQAFLPALGLGTS*LLTMYRYSRLQNKL
Trigger: GAGTTTGTTTTGAAGCCTTGAATACCGGTACATGGTTAACAGGCAGCTTGTGCCCAATCCCAAAGCGGGAAGAAAGGCCTGGCTTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 90 bp ATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTGCACTaGATCTCGGCTTTGCTTAACAGAAAACAACCCTGCTACGGTTGG +
Preference number: 1 (lower is better)
Translates to: IVYTTHRTVTVQVLH*ISALLNRKQPCYGW
Trigger: CCAACCGTAGCAGGGTTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTGCAATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR TCA 90 bp TTAGATGTCAGGTTAGTAGCTCTCAAATCCTTCACCTCTTCCCCATaGTTTCATGACCCCTCCCGCCACCCTGCCATTCATCTAGAAGAG +
Preference number: 1 (lower is better)
Translates to: LDVRLVALKSFTSSP*FHDPSRHPAIHLEE
Trigger: CTCTTCTAGATGAATGGCAGGGTGGCGGGAGGGGTCATGAAATCATGGGGAAGAGGTGAAGGATTTGAGAGCTACTAACCTGACATCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp GCTTTGAAGGCACAGCCCCGGGCAACGGGGAGAGGAAACTGTGACTaGCATTCATTGCTACTCCATGAAATTATCAATGCCTCGGTATTT +
Preference number: 1 (lower is better)
Translates to: ALKAQPRATGRGNCD*HSLLLHEIINASVF
Trigger: AAATACCGAGGCATTGATAATTTCATGGAGTAGCAATGAATGTCAGTCACAGTTTCCTCTCCCCGTTGCCCGGGGCTGTGCCTTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp CCGTTTAGGAGTGGATGGGCCCCTCTGTATGCAGCTTCACGTATCTaGGATCACATCTGTATCTACTCCTACCCAGCAGAAAAATCACTT +
Preference number: 1 (lower is better)
Translates to: PFRSGWAPLYAASRI*DHICIYSYPAEKSL
Trigger: AAGTGATTTTTCTGCTGGGTAGGAGTAGATACAGATGTGATCTCAGATACGTGAAGCTGCATACAGAGGGGCCCATCCACTCCTAAACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376581.9
3UTR CCA 90 bp TGGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTaGATGGCTGTAGGAAAAATGAGAGCCGCCTCTCCTCTGAAGCAT +
Preference number: 1 (lower is better)
Translates to: WLRLPASFAPNMLFQ*MAVGKMRAASPLKH
Trigger: ATGCTTCAGAGGAGAGGCGGCTCTCATTTTTCCTACAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp GAGCTTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTaGAGAAGCCAGCATTCTTCCCAGTGGTATGAGTCCATGCTTTAT +
Preference number: 1 (lower is better)
Translates to: ELGLPCSKNHQAHCY*RSQHSSQWYESMLY
Trigger: ATAAAGCATGGACTCATACCACTGGGAAGAATGCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp GATAAGCCTGGTCAAAGACATCCTCAGCCATCTCTCCTGGACCTGTaGTTTGGAGTCTGTTGTAAAATGGTTGAGGGAATTGTGGTCATG +
Preference number: 1 (lower is better)
Translates to: DKPGQRHPQPSLLDL*FGVCCKMVEGIVVM
Trigger: CATGACCACAATTCCCTCAACCATTTTACAACAGACTCCAAATCACAGGTCCAGGAGAGATGGCTGAGGATGTCTTTGACCAGGCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 90 bp TTCATTGTTCCGCCATGGAGAGAAGAAGAAACCAGACAGCATCTGTaGGAACCTACATGTTGGGTGCCCACCAAAATGAAAAACAGCTCC +
Preference number: 1 (lower is better)
Translates to: FIVPPWREEETRQHL*EPTCWVPTKMKNSS
Trigger: GGAGCTGTTTTTCATTTTGGTGGGCACCCAACATGTAGGTTCTCACAGATGCTGTCTGGTTTCTTCTTCTCTCCATGGCGGAACAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp TGGAGAAGCCAGCATTCTTCCCAGTGGTATGAGTCCATGCTTTATTaGCGTACTTCATTGTTCCGCCATGGAGAGAAGAAGAAACCAGAC +
Preference number: 1 (lower is better)
Translates to: WRSQHSSQWYESMLY*RTSLFRHGEKKKPD
Trigger: GTCTGGTTTCTTCTTCTCTCCATGGCGGAACAATGAAGTACGTCAATAAAGCATGGACTCATACCACTGGGAAGAATGCTGGCTTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp CCAAGCTCATTGTTACTGGAGAAGCCAGCATTCTTCCCAGTGGTATaGGTCCATGCTTTATTGACGTACTTCATTGTTCCGCCATGGAGA +
Preference number: 1 (lower is better)
Translates to: PSSLLLEKPAFFPVV*VHALLTYFIVPPWR
Trigger: TCTCCATGGCGGAACAATGAAGTACGTCAATAAAGCATGGACTCATACCACTGGGAAGAATGCTGGCTTCTCCAGTAACAATGAGCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp TTTAAAACTTTACTTTGCAGTGATGCATGGGGGAAGCCAAGTTGGTaGTCTCTTTCCTTTGTCTGTGATGAGGAGTGCCCTCTTTCCTCC +
Preference number: 1 (lower is better)
Translates to: FKTLLCSDAWGKPSW*SLSFVCDEECPLSS
Trigger: GGAGGAAAGAGGGCACTCCTCATCACAGACAAAGGAAAGAGAGCACCAACTTGGCTTCCCCCATGCATCACTGCAAAGTAAAGTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTaGGCTGTTACTTTCTGTAGACGCACAAAATCAGCCCCAATGTTT +
Preference number: 1 (lower is better)
Translates to: GFDGVRKLASVYILS*AVTFCRRTKSAPMF
Trigger: AAACATTGGGGCTGATTTTGTGCGTCTACAGAAAGTAACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp TCTTTTGACTTTGAGCCAGGGTGTGTGACAACAGTCTGTACAAACTaGTGTCCATACCAGCAGGTGGGAAGAGCTGTGTCTATAAAAAGC +
Preference number: 1 (lower is better)
Translates to: SFDFEPGCVTTVCTN*CPYQQVGRAVSIKS
Trigger: GCTTTTTATAGACACAGCTCTTCCCACCTGCTGGTATGGACACCAGTTTGTACAGACTGTTGTCACACACCCTGGCTCAAAGTCAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp GTTTCTGGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGGTACATaGAGCATTCTTTTATGTTTGTTGAAGCTGATGATTGACATCTCC +
Preference number: 1 (lower is better)
Translates to: VSGVGGFVQQLLTGT*SILLCLLKLMIDIS
Trigger: GGAGATGTCAATCATCAGCTTCAACAAACATAAAAGAATGCTTCATGTACCAGTCAACAGCTGCTGCACGAACCCTCCCACTCCAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 90 bp CTGTACACAATTCAAAGGCAGGCATTTAGTTTGTTGACCTACTGGTaGCAACAGTGCCTATTTCAAGGTGTTGCTCTTCCCTGCATCCAC +
Preference number: 1 (lower is better)
Translates to: LYTIQRQAFSLLTYW*QQCLFQGVALPCIH
Trigger: GTGGATGCAGGGAAGAGCAACACCTTGAAATAGGCACTGTTGTCACCAGTAGGTCAACAAACTAAATGCCTGCCTTTGAATTGTGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp CCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATTTAGTTTGTTaGCCTACTGGTGACAACAGTGCCTATTTCAAGGTGTTGCTCTTC +
Preference number: 1 (lower is better)
Translates to: PSLRCTQFKGRHLVC*PTGDNSAYFKVLLF
Trigger: GAAGAGCAACACCTTGAAATAGGCACTGTTGTCACCAGTAGGTCAACAAACTAAATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp AAAGGAGTCGTTAGCTTGGTTTCAAGAGCCAGAAAAGGTCATCTATaGGTAATAACAGACTGGTCACCATGCCACTGCAGGCTCCTAAGT +
Preference number: 1 (lower is better)
Translates to: KGVVSLVSRARKGHL*VITDWSPCHCRLLS
Trigger: ACTTAGGAGCCTGCAGTGGCATGGTGACCAGTCTGTTATTACTCATAGATGACCTTTTCTGGCTCTTGAAACCAAGCTAACGACTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp GAATCTTCCCCTAGTGGCAAACAACCCACAGCAGAAAAGCTGTATTaGTTCCCTTTAAGAGGCACCAAATCTAGTAGATCAAACCAAGCC +
Preference number: 1 (lower is better)
Translates to: ESSPSGKQPTAEKLY*FPLRGTKSSRSNQA
Trigger: GGCTTGGTTTGATCTACTAGATTTGGTGCCTCTTAAAGGGAAGCAATACAGCTTTTCTGCTGTGGGTTGTTTGCCACTAGGGGAAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376581.9
3UTR GCA 90 bp CCCACTTTAGTGAAATATGGCATCACCCAGGACGATCACTTAGGATaGTTCCACATGAAAGCTTGCACTTTGGGGAATAGGATCACTGTA +
Preference number: 1 (lower is better)
Translates to: PTLVKYGITQDDHLG*FHMKACTLGNRITV
Trigger: TACAGTGATCCTATTCCCCAAAGTGCAAGCTTTCATGTGGAAGCATCCTAAGTGATCGTCCTGGGTGATGCCATATTTCACTAAAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 90 bp GAAGGCTTGGTTTCGAGGCTACCATGCTGTGATGTCTGTGTCGAGTaGCCAATCTACACCGAAATGATCCTGAATAAATCAGAGTCTATT +
Preference number: 1 (lower is better)
Translates to: EGLVSRLPCCDVCVE*PIYTEMILNKSESI
Trigger: AATAGACTCTGATTTATTCAGGATCATTTCGGTGTAGATTGGCCACTCGACACAGACATCACAGCATGGTAGCCTCGAAACCAAGCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp CCAGCAAGTAGTTTGGAATCAATCAATCATTCAGAAATAAATAGCTaGGGAGACTGCCTTGTCCCCAAGTCTCCAGGAATGAGTGAGTGG +
Preference number: 1 (lower is better)
Translates to: PASSLESINHSEINS*GDCLVPKSPGMSEW
Trigger: CCACTCACTCATTCCTGGAGACTTGGGGACAAGGCAGTCTCCTCAGCTATTTATTTCTGAATGATTGATTGATTCCAAACTACTTGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 90 bp AAGTATTTCAAATGCCTGAAAAGAGGAGCTCTAGATTGGAACGTTTaGGATAAGCCTGGTCAAAGACATCCTCAGCCATCTCTCCTGGAC +
Preference number: 1 (lower is better)
Translates to: KYFKCLKRGALDWNV*DKPGQRHPQPSLLD
Trigger: GTCCAGGAGAGATGGCTGAGGATGTCTTTGACCAGGCTTATCTCAAACGTTCCAATCTAGAGCTCCTCTTTTCAGGCATTTGAAATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 90 bp GCCCTTTTCAAGGATATACCCAAACAGCTAGCACCAGGCCACTTTTaGTCTGTGATGTCTACAACTCCAGGCCAAATCATCATACAGATT +
Preference number: 1 (lower is better)
Translates to: ALFKDIPKQLAPGHF*SVMSTTPGQIIIQI
Trigger: AATCTGTATGATGATTTGGCCTGGAGTTGTAGACATCACAGATCAAAAGTGGCCTGGTGCTAGCTGTTTGGGTATATCCTTGAAAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp GAGGCAGTTATAAGTGAGAGCATGCTGGACACCTTGACTTTGCAGTaGCGTGGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTG +
Preference number: 1 (lower is better)
Translates to: EAVISESMLDTLTLQ*RGTEKAFTSSLKEL
Trigger: CAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCCACGTCACTGCAAAGTCAAGGTGTCCAGCATGCTCTCACTTATAACTGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp GACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGTATCTaGATCATTGTGTGTCTCATGTGTAGTGTGTCTCAAACTCCACTC +
Preference number: 1 (lower is better)
Translates to: DCIMQGPIKLKKTSI*IIVCLMCSVSQTPL
Trigger: GAGTGGAGTTTGAGACACACTACACATGAGACACACAATGATGCAGATACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 90 bp GATTCTTGGACTGCATCACTATTTTTATGGCCAAAATGGGTTTCCTaGCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTACTGT +
Preference number: 1 (lower is better)
Translates to: DSWTASLFLWPKWVS*PHIGNAYASLESYC
Trigger: ACAGTAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTGGCCATAAAAATAGTGATGCAGTCCAAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 90 bp GACATCAGACAGTGCTCCAACAGTGTAAGAACAGAAGCTACACCATaGTTTGAGGGTAAAGACAGAACGCTGAAAACAAAGCGTTTTCTC +
Preference number: 1 (lower is better)
Translates to: DIRQCSNSVRTEATP*FEGKDRTLKTKRFL
Trigger: GAGAAAACGCTTTGTTTTCAGCGTTCTGTCTTTACCCTCAAAGCATGGTGTAGCTTCTGTTCTTACACTGTTGGAGCACTGTCTGATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp ATTGTTACTGGAGAAGCCAGCATTCTTCCCAGTGGTATGAGTCCATaGTTTATTGACGTACTTCATTGTTCCGCCATGGAGAGAAGAAGA +
Preference number: 1 (lower is better)
Translates to: IVTGEASILPSGMSP*FIDVLHCSAMERRR
Trigger: TCTTCTTCTCTCCATGGCGGAACAATGAAGTACGTCAATAAAGCATGGACTCATACCACTGGGAAGAATGCTGGCTTCTCCAGTAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 90 bp CACTGGATCTCGGCTTTGCTTAACAGAAAACAACCCTGCTACGGTTaGAAAGAGTTACCACTTAAAACGATTTGGTCAACTTGCACCAAG +
Preference number: 1 (lower is better)
Translates to: HWISALLNRKQPCYG*KELPLKTIWSTCTK
Trigger: CTTGGTGCAAGTTGACCAAATCGTTTTAAGTGGTAACTCTTTCCAACCGTAGCAGGGTTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CCA 90 bp AAATTGGAGAAGATTTCATTTTGTGTTTCCAGGGAGTATTCTGTGTaGGGAACTGTTTCCTTACGTGAGGCCGGCGGCATAAGTCAAAGA +
Preference number: 1 (lower is better)
Translates to: KLEKISFCVSREYSV*GTVSLREAGGISQR
Trigger: TCTTTGACTTATGCCGCCGGCCTCACGTAAGGAAACAGTTCCCCACACAGAATACTCCCTGGAAACACAAAATGAAATCTTCTCCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp CCTGATGTCTGTGTTGTGTTTAAAACTTTACTTTGCAGTGATGCATaGGGGAAGCCAAGTTGGTGCTCTCTTTCCTTTGTCTGTGATGAG +
Preference number: 1 (lower is better)
Translates to: PDVCVVFKTLLCSDA*GKPSWCSLSFVCDE
Trigger: CTCATCACAGACAAAGGAAAGAGAGCACCAACTTGGCTTCCCCCATGCATCACTGCAAAGTAAAGTTTTAAACACAACACAGACATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp TGGAAGAGCAAAGTTCACCTCTTCTTTTCCCACTTTAGTGAAATATaGCATCACCCAGGACGATCACTTAGGATGCTTCCACATGAAAGC +
Preference number: 1 (lower is better)
Translates to: WKSKVHLFFSHFSEI*HHPGRSLRMLPHES
Trigger: GCTTTCATGTGGAAGCATCCTAAGTGATCGTCCTGGGTGATGCCATATTTCACTAAAGTGGGAAAAGAAGAGGTGAACTTTGCTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp AAAACCGACTTCTGGACATTCATGTGGACAGATATCATTTGTCAATaGGACGAGCCGATCCTCCTCCATTTTCTATGCTGCTGCCAAATT +
Preference number: 1 (lower is better)
Translates to: KTDFWTFMWTDIICQ*DEPILLHFLCCCQI
Trigger: AATTTGGCAGCAGCATAGAAAATGGAGGAGGATCGGCTCGTCTCATTGACAAATGATATCTGTCCACATGAATGTCCAGAAGTCGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 90 bp CAGGTATTGCACTGGATCTCGGCTTTGCTTAACAGAAAACAACCCTaGTACGGTTGGAAAGAGTTACCACTTAAAACGATTTGGTCAACT +
Preference number: 1 (lower is better)
Translates to: QVLHWISALLNRKQP*YGWKELPLKTIWST
Trigger: AGTTGACCAAATCGTTTTAAGTGGTAACTCTTTCCAACCGTAGCAGGGTTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTGCAATACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR GCA 90 bp TTTATGGCCAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATaGATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTT +
Preference number: 1 (lower is better)
Translates to: FMAKMGFLPSHRECI*IPGILLCHHVWINV
Trigger: AACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTGGCCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 90 bp CATCTGCCTTCCTTATCCAATAGTTTTATCCCTGCATTGCTCTTGTaGAGTGGCTGGTTTGGTTCTGTATGTAGCATTTTGTACCTTTCC +
Preference number: 1 (lower is better)
Translates to: HLPSLSNSFIPALLL*SGWFGSVCSILYLS
Trigger: GGAAAGGTACAAAATGCTACATACAGAACCAAACCAGCCACTTCACAAGAGCAATGCAGGGATAAAACTATTGGATAAGGAAGGCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 90 bp CAAATAAATTTTATAACACGCTTATTTTGCATACTCCTTGAAATGTaGCTCTTCAGAGGACAGGGCACCTGCTGTGTATGTGTGGCCGTG +
Preference number: 1 (lower is better)
Translates to: QINFITRLFCILLEM*LFRGQGTCCVCVAV
Trigger: CACGGCCACACATACACAGCAGGTGCCCTGTCCTCTGAAGAGTCACATTTCAAGGAGTATGCAAAATAAGCGTGTTATAAAATTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 90 bp TGGAAGTGCATCTGCCTTCCTTATCCAATAGTTTTATCCCTGCATTaGTCTTGTGAAGTGGCTGGTTTGGTTCTGTATGTAGCATTTTGT +
Preference number: 1 (lower is better)
Translates to: WKCICLPYPIVLSLH*SCEVAGLVLYVAFC
Trigger: ACAAAATGCTACATACAGAACCAAACCAGCCACTTCACAAGAGCAATGCAGGGATAAAACTATTGGATAAGGAAGGCAGATGCACTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTaGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTT +
Preference number: 1 (lower is better)
Translates to: QNGFPALTSGMHMHP*NLTVSSCMDQCSLF
Trigger: AAAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 90 bp TCATACCATCACACTAGAGGAAGGCCAGTCTTAGAACTAAGTCCATaGCCATCAGAGGAGAAATGTTTACAGACCATAAAAGAGAAAGTC +
Preference number: 1 (lower is better)
Translates to: SYHHTRGRPVLELSP*PSEEKCLQTIKEKV
Trigger: GACTTTCTCTTTTATGGTCTGTAAACATTTCTCCTCTGATGGTCATGGACTTAGTTCTAAGACTGGCCTTCCTCTAGTGTGATGGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 90 bp AAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTACGGGCTTaGCTAACAGAGAGCCAATATAAAACTCATCAGAGAGCTACCATT +
Preference number: 1 (lower is better)
Translates to: KFIQSYLSLHMLLRA*LTESQYKTHQRATI
Trigger: AATGGTAGCTCTCTGATGAGTTTTATATTGGCTCTCTGTTAGCCAAGCCCGTAAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 90 bp TGGCACAAACAATTACGGAACTTCAAATTAGCACTGCTATATTTATaGATTTCAATTTATCACCCAGACCAGAAACTGCCTGCGCTGCTC +
Preference number: 1 (lower is better)
Translates to: WHKQLRNFKLALLYL*ISIYHPDQKLPALL
Trigger: GAGCAGCGCAGGCAGTTTCTGGTCTGGGTGATAAATTGAAATCCATAAATATAGCAGTGCTAATTTGAAGTTCCGTAATTGTTTGTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp AGGAAGACCTATCTTCAGTCTTTCAATAAATCACTGCAGGGAAAGTaGCAAATGCTTTACTTCCTACAAAGAAACTTTGAGGCCCAGAAG +
Preference number: 1 (lower is better)
Translates to: RKTYLQSFNKSLQGK*QMLYFLQRNFEAQK
Trigger: CTTCTGGGCCTCAAAGTTTCTTTGTAGGAAGTAAAGCATTTGTCACTTTCCCTGCAGTGATTTATTGAAAGACTGAAGATAGGTCTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp AAGCAAACAAACATGGTTCTGTTGTTAGGTAAAATGAGCCCGGTTTaGTTTATATGGCATTATAAAGCTTGTTTACACCTTGCAGTCTGT +
Preference number: 1 (lower is better)
Translates to: KQTNMVLLLGKMSPV*FIWHYKACLHLAVC
Trigger: ACAGACTGCAAGGTGTAAACAAGCTTTATAATGCCATATAAATCAAACCGGGCTCATTTTACCTAACAACAGAACCATGTTTGTTTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 90 bp CTAATTAAACGCCTATCTAATAAAATATTGTCAATGGCATACAGATaGCTGTTCAAGGAGCTGAAGCCATTTATTTTGAGTTCTGGAGCT +
Preference number: 1 (lower is better)
Translates to: LIKRLSNKILSMAYR*LFKELKPFILSSGA
Trigger: AGCTCCAGAACTCAAAATAAATGGCTTCAGCTCCTTGAACAGTCATCTGTATGCCATTGACAATATTTTATTAGATAGGCGTTTAATTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTAGCGCCCCCAGCGGATaGCAGGACTGGAGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCASAPSG*QDWRWE
Trigger: CTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCT...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR GCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTAAGCGCCCCCAGCGGATaGCAGGACTGGAGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLSAPSG*QDWRWE
Trigger: CTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCT...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CAA 90 bp GGAGCTGCCGAGTGCCCAGGTCAGCGCCCTGGACTGCTTGCGCACTaGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTGTGCGAT +
Preference number: 2 (lower is better)
Translates to: GAAECPGQRPGLLAH*LTEMMQLEVADLCD
Trigger: ATCGCACAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGCTGACCTGGGCACTCGGCAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 90 bp CAGCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTaGGAGGTTGCTGATCTGTGCGATTGCTGTAGCGGTTGCCGGGGA +
Preference number: 2 (lower is better)
Translates to: QRPGLLAHLLTEMMQ*EVADLCDCCSGCRG
Trigger: TCCCCGGCAACCGCTACAGCAATCGCACAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR TCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTAGCCTGGGTAAGAAGTaGCCCTGGCTGCCCAGTACA +
Preference number: 2 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVSLGKK*PWLPST
Trigger: TGTACTGGGCAGCCAGGGTCACTTCTTACCCAGGCT...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGCAGGAAAGCAGCCACTaGGGAAACGAGTGTGTCCGG +
Preference number: 2 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVQESSH*GNECVR
Trigger: CCGGACACACTCGTTTCCGCAGTGGCTGCTTTCCTG...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTAGCGGATGCCAGGACTaGAGGTGGGAGCGCTGTTCA +
Preference number: 2 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQASGCQD*RWERCS
Trigger: TGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCAAGGGGCCAAAGCCACTaGAAACCGTGTTCCCTGTGC +
Preference number: 2 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPRGQSH*KPCSLC
Trigger: GCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCT...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 90 bp TGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAATGGGGTTGAATaGGCCCTCGCCTCCGCTTGTTTGAGACTCTCGTTAGAAAGGGCT +
Preference number: 2 (lower is better)
Translates to: WAGAMVRGAGKNGVE*ALASACLRLSLERA
Trigger: AGCCCTTTCTAACGAGAGTCTCAAACAAGCGGAGGCGAGGGCCAATTCAACCCCATTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR TCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCCTGGTGCTTCCCTTGTaGTCGGGTCGCGTGATGAGC +
Preference number: 2 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEALVLPL*SGRVMS
Trigger: GCTCATCACGCGACCCGATCACAAGGGAAGCACCAG...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTGGAAAACCAAGGGAATaGCAGCCACCCCATCACCAT +
Preference number: 2 (lower is better)
Translates to: QSELHREGAFLVLRWAGAGKPRE*QPPHHH
Trigger: ATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCATCATTCTTCCCTCTTaGCCGGTCTGGGGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFIILPS*PVWGSW
Trigger: CCAGCTTCCCCAGACCGGCCAAGAGGGAAGAATGAT...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp CAGACGCAGCACATTTTACGTGCTCACTGGGCATCGTGGCTGGGGTaGACCCTATTTACCCTCGGGCGGGTCTGTAGCTACCTGATGTCT +
Preference number: 2 (lower is better)
Translates to: QTQHILRAHWASWLG*TLFTLGRVCSYLMS
Trigger: AGACATCAGGTAGCTACAGACCCGCCCGAGGGTAAATAGGGTCAACCCCAGCCACGATGCCCAGTGAGCACGTAAAATGTGCTGCGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 90 bp ATTCTTCCCTCTTGGCCGGTCTGGGGAAGCTGGGTTTGCAGCATCTaGATCAGCTCTTCGGCAGAGCTGCTGAAAGGCAGTGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: ILPSWPVWGSWVCSI*ISSSAELLKGSGRR
Trigger: TCTCCTCCCACTGCCTTTCAGCAGCTCTGCCGAAGAGCTGATCAAGATGCTGCAAACCCAGCTTCCCCAGACCGGCCAAGAGGGAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp CACGCTCATCATTCTTCCCTCTTGGCCGGTCTGGGGAAGCTGGGTTaGCAGCATCTTGATCAGCTCTTCGGCAGAGCTGCTGAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: HAHHSSLLAGLGKLG*QHLDQLFGRAAERQ
Trigger: CTGCCTTTCAGCAGCTCTGCCGAAGAGCTGATCAAGATGCTGCAAACCCAGCTTCCCCAGACCGGCCAAGAGGGAAGAATGATGAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp TCCGATACAGCCACCTCCACTCTCAAAGGCCAACAGCGAGCACCCTaGCTGCACTGCACCTGGGAACACACATTTAGGGGACAGAGCAGT +
Preference number: 2 (lower is better)
Translates to: SDTATSTLKGQQRAP*LHCTWEHTFRGQSS
Trigger: ACTGCTCTGTCCCCTAAATGTGTGTTCCCAGGTGCAGTGCAGCAAGGGTGCTCGCTGTTGGCCTTTGAGAGTGGAGGTGGCTGTATCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTACCACTCACAGGACGGTaGCAGTCCAGGTATTGCACT +
Preference number: 2 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLPLTGR*QSRYCT
Trigger: AGTGCAATACCTGGACTGTCACCGTCCTGTGAGTGG...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR TCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTGGGGACTACGTACCATaGTTTCATAGTGCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: QSELHREGAFLVLRWAGAGDYVP*FHSALQ
Trigger: CTGCAGAGCACTATGAAATCATGGTACGTAGTCCCC...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR TCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCGAGGCTACCATGCTGTaGTGTCTGTGTCGAGTGGCC +
Preference number: 2 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAEATML*CLCRVA
Trigger: GGCCACTCGACACAGACATCACAGCATGGTAGCCTC...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTACCGTGCATACACTGTaGCATGAGCTTGGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVTVHTL*HELGLP
Trigger: TGGAAGGCCAAGCTCATGTCACAGTGTATGCACGGT...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCAAGGAATAACGACAGGTaGCGGGGACTACGTACCATG +
Preference number: 2 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPRNNDR*RGLRTM
Trigger: CATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCT...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGGAGGTACTCAGCCTCTaGGAGACGAGGGCCGTGGAC +
Preference number: 2 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWEVLSL*ETRAVD
Trigger: GTCCACGGCCCTCGTCTCCCAGAGGCTGAGTACCTC...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTTCCATCAGCCATTCTTaGTGCTTCTGGAGCGAGCAG +
Preference number: 2 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVSISHS*CFWSEQ
Trigger: CTGCTCGCTCCAGAAGCACCAAGAATGGCTGATGGA...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCTGCAGGAATGCTGGGTaGAAGGCAGTGACACTGGTG +
Preference number: 2 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEACRNAG*KAVTLV
Trigger: CACCAGTGTCACTGCCTTTCACCCAGCATTCCTGCA...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGGGGCAGGTGCTATGGTaGGGGGCGCTGGAAAGAATG +
Preference number: 2 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVGQVLW*GALERM
Trigger: CATTCTTTCCAGCGCCCCGCACCATAGCACCTGCCC...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR GCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGCTCAGCGTCAACTGCTaGTGGTCTGTAGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWLSVNC*WSVARP
Trigger: GGGCCTGGCTACAGACCAGCAGCAGTTGACGCTGAG...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR GCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCGGGTGGCAGGGTAGATaGTGCTGGCTTTTCCTGACT +
Preference number: 2 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAGWQGR*CWLFLT
Trigger: AGTCAGGAAAAGCCAGCAGCATCTACCCTGCCACCC...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCGAGCTTGGCCTTCCATaGTCAAAGAACCACCAAGCT +
Preference number: 2 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFELGLP*SKNHQA
Trigger: AGCTTGGTGGTTCTTTGAGCATGGAAGGCCAAGCTC...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGCGGATGCCAGGACTaGAGGTGGGAGCGCTGTTCA +
Preference number: 2 (lower is better)
Translates to: RPFASCCLFPATPVRAPQSGCQD*RWERCS
Trigger: TGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCT...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CAA 90 bp CACACGCACACCTGCCCGGTAGTCCTCGCTCCCTCCTTAGCGTCCTaGGTCTGTGTGCTTTTCCATGTTGCAGTGATTTCTAACTACTCC +
Preference number: 2 (lower is better)
Translates to: HTHTCPVVLAPSLAS*VCVLFHVAVISNYS
Trigger: GGAGTAGTTAGAAATCACTGCAACATGGAAAAGCACACAGACCAAGGACGCTAAGGAGGGAGCGAGGACTACCGGGCAGGTGTGCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTATGCCCTGTCTTGTGTTaGACGGATGTGTGTGTACTG +
Preference number: 2 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLCPVLC*TDVCVL
Trigger: CAGTACACACACATCCGTTCAACACAAGACAGGGCA...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR TCA 90 bp GACATCTCCCGTGGGTGTGCCAGTTCTTGTGGAGTTAAGACAGGATTTTTGGAACCTGTGCAGTCCGACTaGCACTACCCCATGCCTGGG +
Preference number: 2 (lower is better)
Translates to: DISRGCASSCGVKTGFLEPVQSD*HYPMPG
Trigger: CCCAGGCATGGGGTAGTGTCAGTCGGACTGCACAGG...TTCCAAAAATCCTGTCTTAACTCCACAAGAACTGGCACACCCACGGGAGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR TCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTTCTCAGTGCCAGCCCTaGGCTGCTCCTGGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLSQCQP*AAPGSA
Trigger: AGCTGAGCCAGGAGCAGCTCAGGGCTGGCACTGAGA...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR TCA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGGCTAGTAACAGTGGGTaGGCCGCTCGAGGGACTGGG +
Preference number: 2 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLASNSG*AARGTG
Trigger: CCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGC...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR GCA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCGCCCTGAGCTACAGATaGTTGAGTGGGTTATTGTGT +
Preference number: 2 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSALSYR*LSGLLC
Trigger: ACACAATAACCCACTCAAGCATCTGTAGCTCAGGGC...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTAGACAGGAGAGCTGCTaGGAAGCCATGTTTTTGATT +
Preference number: 2 (lower is better)
Translates to: QSELHREGAFLVLRWAGARQESC*EAMFLI
Trigger: AATCAAAAACATGGCTTCCCAGCAGCTCTCCTGTCT...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGTGCCAGGACTGGAGGTaGGAGCGCTGTTCATTCAGA +
Preference number: 2 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLCQDWR*ERCSFR
Trigger: TCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCA...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR TCA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCAGGGTTTTCATGCTTGTaGCACAGACAGACAGCAAAA +
Preference number: 2 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPGFSCL*HRQTAK
Trigger: TTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCC...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR TCA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCATACCACAAATGGTGCTaGTCAATGACACACGGGTTT +
Preference number: 2 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPYHKWC*SMTHGF
Trigger: AAACCCGTGTGTCATTGATCAGCACCATTTGTGGTA...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR TCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCTGCGTTCTGTTTCAGTaGGACCTCTCCTCTAGCTAC +
Preference number: 2 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEACVLFQ*DLSSSY
Trigger: GTAGCTAGAGGAGAGGTCTCACTGAAACAGAACGCA...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCAGAAGTGACCCTGGCTaGCCAGTACAAACAGCTGGG +
Preference number: 2 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACRSDPG*PVQTAG
Trigger: CCCAGCTGTTTGTACTGGGCAGCCAGGGTCACTTCT...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCTGTGTCTGTTTTTCTTaGTTTGCTGTGGGACCTTGC +
Preference number: 2 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSCVCFS*FAVGPC
Trigger: GCAAGGTCCCACAGCAAACCAAGAAAAACAGACACA...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCGTTATTTTGCTTCTCTaGAAGGGGCCTATGCTTGCT +
Preference number: 2 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSVILLL*KGPMLA
Trigger: AGCAAGCATAGGCCCCTTCCAGAGAAGCAAAATAAC...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCGCCACATGGCACAATTaGGGGGAGATAAATCAGAAA +
Preference number: 2 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFATWHN*GEINQK
Trigger: TTTCTGATTTATCTCCCCCCAATTGTGCCATGTGGC...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTCAAGCTCATTGTTACTaGAGAAGCCAGCATTCTTCC +
Preference number: 2 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVQAHCY*RSQHSS
Trigger: GGAAGAATGCTGGCTTCTCCAGTAACAATGAGCTTG...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp AGAGCAGCCAGTGAGTGGCTGGTATCTGAAGGCCTGGGTCCCCTATaGAGTCAGGAGACCCCTACACTAGCTATTGTCCTAGAAAGATTG +
Preference number: 2 (lower is better)
Translates to: RAASEWLVSEGLGPL*SQETPTLAIVLERL
Trigger: CAATCTTTCTAGGACAATAGCTAGTGTAGGGGTCTCCTGACTCAATAGGGGACCCAGGCCTTCAGATACCAGCCACTCACTGGCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTCCACTCACAGGACGGTaGCAGTCCAGGTATTGCACT +
Preference number: 2 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIPLTGR*QSRYCT
Trigger: AGTGCAATACCTGGACTGTCACCGTCCTGTGAGTGG...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR TCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTAGGGTTTTCATGCTTGTaGCACAGACAGACAGCAAAA +
Preference number: 2 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLGFSCL*HRQTAK
Trigger: TTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCC...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR TCA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTAGCCAGGCCCAGCCTTTaGGACGGGTTTACTGTCACC +
Preference number: 2 (lower is better)
Translates to: KMGFLPSHRECICIPGILARPSL*DGFTVT
Trigger: GGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGC...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR TCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCGATATCATTTGTCAATaGGACGAGCCGATCCTCCTC +
Preference number: 2 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEADIICQ*DEPILL
Trigger: GAGGAGGATCGGCTCGTCTCATTGACAAATGATATC...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCCCTAGAAAGATTGGTTaGGAGGTCTCAGGAAACCCT +
Preference number: 2 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAPRKIG*EVSGNP
Trigger: AGGGTTTCCTGAGACCTCTCAACCAATCTTTCTAGG...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTCAAATCAGAGTAACCTaGTCTGGAGACTACATGAAG +
Preference number: 2 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVQIRVT*SGDYMK
Trigger: CTTCATGTAGTCTCCAGATCAGGTTACTCTGATTTG...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTTCTGGAAGGGGCCTATaGTTGCTAGGCAGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLSGRGL*LLGRQP
Trigger: TGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCCAGA...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR GCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCTGTTTTGCTCGGGGATaGTTACATTTGACGATTCCT +
Preference number: 2 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFCFARG*LHLTIP
Trigger: AGGAATCGTCAAATGTAAGCATCCCCGAGCAAAACA...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCACATTCTGCAATTGCTaGACCTGGCCCCAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASTFCNC*TWPQQH
Trigger: GTGCTGCTGGGGCCAGGTGCAGCAATTGCAGAATGT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCTGTCTAGGCTCTCCATaGAAGCTACAGTCACAGATG +
Preference number: 2 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEACLGSP*KLQSQM
Trigger: CATCTGTGACTGTAGCTTGCATGGAGAGCCTAGACA...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCTCTTTAGGGAAACCCTaGTCTCGTGACCCCAGGTTG +
Preference number: 2 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACSLGKP*SRDPRL
Trigger: CAACCTGGGGTCACGAGACCAGGGTTTCCCTAAAGA...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAAAGCCCAGTGAGGCCCTaGTATGGTGGCACATCAGGG +
Preference number: 2 (lower is better)
Translates to: SNLIWRLHEDANALPPLQSPVRP*YGGTSG
Trigger: CCCTGATGTGCCACCATACCAGGGCCTCACTGGGCT...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCCATCTCACTCAAAAGTaGAGTCAATCACTGTCCGAT +
Preference number: 2 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFHLTQK*SQSLSD
Trigger: ATCGGACAGTGATTGACTCCACTTTTGAGTGAGATG...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp ATGATTAACACACGGCAGGCTCTTCGTCCGTTTGCAAGTTGCTGTTaGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTT +
Preference number: 2 (lower is better)
Translates to: MINTRQALRPFASCC*FPATPVRAPQRGCV
Trigger: AACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACGAAGAGCCTGCCGTGTGTTAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CAA 90 bp CGGTGGCCATGGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTaGTTTCAGTGGATGGCTGTAGGAAAAATGAGAGCCGCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: RWPWLRLPASFAPNM*FQWMAVGKMRAASP
Trigger: AGGAGAGGCGGCTCTCATTTTTCCTACAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCCATGGCCACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 90 bp GTTGCAGTGATTTCTAACTACTCCTCACTCCTCAACATTCTGCAATaGCTGCACCTGGCCCCAGCAGCACACTCCAGTATCTCACAGCAC +
Preference number: 2 (lower is better)
Translates to: VAVISNYSSLLNILQ*LHLAPAAHSSISQH
Trigger: GTGCTGTGAGATACTGGAGTGTGCTGCTGGGGCCAGGTGCAGCAATTGCAGAATGTTGAGGAGTGAGGAGTAGTTAGAAATCACTGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCCAGGTTGCTCGGGCTaGAGACTTGGCTCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFPGCSG*RLGSWP
Trigger: AGGCCAGGAGCCAAGTCTTCAGCCCGAGCAACCTGG...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCCTTTTTCAGAAGAAATaGAGGTTTGCCCAGAAGAAC +
Preference number: 2 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFLFQKK*RFAQKN
Trigger: GTTCTTCTGGGCAAACCTTCATTTCTTCTGAAAAAG...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTGGTTACTCTAGGAAATaGCAAAGTTGCCCTTTTCAA +
Preference number: 2 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVGYSRK*QSCPFQ
Trigger: TTGAAAAGGGCAACTTTGTCATTTCCTAGAGTAACC...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCGCCAGCTATCAATCCTaGTTCATAATAAAGCAGACT +
Preference number: 2 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFASYQS*FIIKQT
Trigger: AGTCTGCTTTATTATGAATCAGGATTGATAGCTGGC...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTAGCTACCACTGGAACCTaGCTCAGCGTCAACTGCTGC +
Preference number: 2 (lower is better)
Translates to: KMGFLPSHRECICIPGILATTGT*LSVNCC
Trigger: GCAGCAGTTGACGCTGAGGCAGGTTCCAGTGGTAGC...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR GCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCAATATCTCAGAAAATTaGAACGTGCAGCTAAGGCAG +
Preference number: 2 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFNISEN*NVQLRQ
Trigger: CTGCCTTAGCTGCACGTTGCAATTTTCTGAGATATT...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCTCAACATTCTGCAATTaGTGCACCTGGCCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASSTFCN*CTWPQQ
Trigger: CTGCTGGGGCCAGGTGCAGCAATTGCAGAATGTTGA...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCTTCCTGAAATTGCCCTaGAATTTCTTAGGCATTCAG +
Preference number: 2 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFFLKLP*NFLGIQ
Trigger: CTGAATGCCTAAGAAATTGCAGGGCAATTTCAGGAA...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCTTAATATGTGCGCTCTaGAGACTTGGAACGACAAAA +
Preference number: 2 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFLICAL*RLGTTK
Trigger: TTTTGTCGTTCCAAGTCTGCAGAGCGCACATATTAA...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGAGCGGATGCCAGGACTaGAGGTGGGAGCGCTGTTCA +
Preference number: 2 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRSGCQD*RWERCS
Trigger: TGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCT...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTCGTGAAACCCCGCAGTaGAACGCTGTGTGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLRETPQ*NAVCCK
Trigger: TTTGCAGCACACAGCGTTCCACTGCGGGGTTTCACG...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp TGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATTTGAGCATAGGGAACAGTaGGGGGCAGGCCCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: CVVCLKLHSDGLLPTLVFEHREQ*GAGPPC
Trigger: ACAGGGAGGGCCTGCCCCCCACTGTTCCCTATGCTC...AAATACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTTGAGACACACTACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCAGATTCGAGACAGCCTaGGTAAGAAGTGACCCTGGC +
Preference number: 2 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASRFETA*VRSDPG
Trigger: GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTAGAGCAGCCAGTGAGTaGCTGGTATCTGAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGRAASE*LVSEGL
Trigger: CAGGCCTTCAGATACCAGCCACTCACTGGCTGCTCT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCCTGTGTGCACACTCATaGCAGTTTCAACAACATTTA +
Preference number: 2 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFLCAHS*QFQQHL
Trigger: TAAATGTTGTTGAAACTGCCATGAGTGTGCACACAG...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp CTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATaGCACTGGATCTCGGCTTTGCTTAACAGAAAACAACCCTGCTAC +
Preference number: 2 (lower is better)
Translates to: LPIVYTTHRTVTVQV*HWISALLNRKQPCY
Trigger: GTAGCAGGGTTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTGCAATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CAA 90 bp TTATCATCAGTGAGCCAAAGCCAGGCCTTTCTTCCCGCTTTGGGATaGGGCACAAGCTGCCTGTTAACCATGTACCGGTATTCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: LSSVSQSQAFLPALG*GTSCLLTMYRYSRL
Trigger: AAGCCTTGAATACCGGTACATGGTTAACAGGCAGCTTGTGCCCAATCCCAAAGCGGGAAGAAAGGCCTGGCTTTGGCTCACTGATGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp GAGACTTTATCATCAGTGAGCCAAAGCCAGGCCTTTCTTCCCGCTTaGGGATTGGGCACAAGCTGCCTGTTAACCATGTACCGGTATTCA +
Preference number: 2 (lower is better)
Translates to: ETLSSVSQSQAFLPA*GLGTSCLLTMYRYS
Trigger: TGAATACCGGTACATGGTTAACAGGCAGCTTGTGCCCAATCCCAAAGCGGGAAGAAAGGCCTGGCTTTGGCTCACTGATGATAAAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTTGCCCTGTCTTGTGTTaGACGGATGTGTGTGTACTG +
Preference number: 2 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMICPVLC*TDVCVL
Trigger: CAGTACACACACATCCGTTCAACACAAGACAGGGCA...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR TCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTGAAACCCTGGTCTCGTaGCCCCAGGTTGCTCGGGCT +
Preference number: 2 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVETLVS*PQVARA
Trigger: AGCCCGAGCAACCTGGGGTCACGAGACCAGGGTTTC...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTAATAGACTACTTCAATaGACAACTCTCAAACGATCC +
Preference number: 2 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVNRLLQ*TTLKRS
Trigger: GGATCGTTTGAGAGTTGTTCATTGAAGTAGTCTATT...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCACAGGAAAGCAGCCACTaGGGAAACGAGTGTGTCCGG +
Preference number: 2 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPQESSH*GNECVR
Trigger: CCGGACACACTCGTTTCCGCAGTGGCTGCTTTCCTG...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR GCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTATGGAACGCTGTGTGCTaGAAATTGCTTATTAATCAG +
Preference number: 2 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLWNAVC*KLLINQ
Trigger: CTGATTAATAAGCAATTTGCAGCACACAGCGTTCCA...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR GCA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTAGGCTTTAGAAACCCTTaGTGGAGTGTCCCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: KMGFLPSHRECICIPGILGFRNP*WSVPFP
Trigger: GGGGAAGGGGACACTCCAGCAAGGGTTTCTAAAGCC...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR GCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTGTGGCTGGTAGCTCCTaGGTTTTTGAGCTGTGTCCT +
Preference number: 2 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLVAGSS*VFELCP
Trigger: AGGACACAGCTCAAAAACGCAGGAGCTACCAGCCAC...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR GCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCATTATGGCCTGTAATTaGCTAAGTCTACTTGATCAC +
Preference number: 2 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFIMACN*LSLLDH
Trigger: GTGATCAAGTAGACTTAGGCAATTACAGGCCATAAT...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTGATATATTAATACCGTaGATACACTGTGACATGAGC +
Preference number: 2 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVDILIP*IHCDMS
Trigger: GCTCATGTCACAGTGTATGCACGGTATTAATATATC...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp ACTCACAGGACGGTGACAGTCCAGGTATTGCACTGGATCTCGGCTTaGCTTAACAGAAAACAACCCTGCTACGGTTGGAAAGAGTTACCA +
Preference number: 2 (lower is better)
Translates to: THRTVTVQVLHWISA*LNRKQPCYGWKELP
Trigger: TGGTAACTCTTTCCAACCGTAGCAGGGTTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTGCAATACCTGGACTGTCACCGTCCTGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CAA 90 bp CTGCTCTCTCTTTGTAATTTAAAACACGCTCATCATTCTTCCCTCTaGGCCGGTCTGGGGAAGCTGGGTTTGCAGCATCTTGATCAGCTC +
Preference number: 2 (lower is better)
Translates to: LLSLCNLKHAHHSSL*AGLGKLGLQHLDQL
Trigger: GAGCTGATCAAGATGCTGCAAACCCAGCTTCCCCAGACCGGCCAAGAGGGAAGAATGATGAGCGTGTTTTAAATTACAAAGAGAGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAACTGGGTGAAAGGCAGTaGCACTGGTGGGCAAGATTT +
Preference number: 2 (lower is better)
Translates to: SNLIWRLHEDANALPPLQLGERQ*HWWARF
Trigger: AAATCTTGCCCACCAGTGTCACTGCCTTTCACCCAG...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCCTGGTACAAAGCCAGTaGGGGAAAAACTCTATGAGC +
Preference number: 2 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASLVQSQ*GKNSMS
Trigger: GCTCATAGAGTTTTTCCCTCACTGGCTTTGTACCAG...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTGCCTGGGTCCCCTATTaGGTCAGGAGACCCCTACAC +
Preference number: 2 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVAWVPY*VRRPLH
Trigger: GTGTAGGGGTCTCCTGACTCAATAGGGGACCCAGGC...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTGCCACTTTTGATCTGTaGTGTCTACAACTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGATFDL*CLQLQA
Trigger: GGCCTGGAGTTGTAGACATCACAGATCAAAAGTGGC...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCAGGAAAGCAGCCACTaGGGAAACGAGTGTGTCCGG +
Preference number: 2 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLQESSH*GNECVR
Trigger: CCGGACACACTCGTTTCCGCAGTGGCTGCTTTCCTG...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCATGCCAGGACTGGAGGTaGGAGCGCTGTTCATTCAGA +
Preference number: 2 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPCQDWR*ERCSFR
Trigger: TCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCA...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCGTGAAACCCCGCAGTaGAACGCTGTGTGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIRETPQ*NAVCCK
Trigger: TTTGCAGCACACAGCGTTCCACTGCGGGGTTTCACG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGCACCAAGAAGTAGGTTaGGAACAGGTGTTTTCAGGT +
Preference number: 2 (lower is better)
Translates to: RPFASCCLFPATPVRAPQHQEVG*EQVFSG
Trigger: ACCTGAAAACACCTGTTCCCAACCTACTTCTTGGTG...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTAGGAAAACCAAGGGAATaGCAGCCACCCCATCACCAT +
Preference number: 2 (lower is better)
Translates to: KMGFLPSHRECICIPGILGKPRE*QPPHHH
Trigger: ATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp AAAATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTGCTTTGGACCATATGTGAGTGGTGACTTCTaGAGGGAGCCTGATGCTGCT +
Preference number: 2 (lower is better)
Translates to: KIPRDIFVQTRCSCFGPYVSGDF*REPDAA
Trigger: AGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCAC...ATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp AAAATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTGCTTTGGACCATATCTGCTGCCAATGAGGTaGACACCAGTGTGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: KIPRDIFVQTRCSCFGPYLLPMR*TPVWFG
Trigger: CCCAAACCACACTGGTGTCCACCTCATTGGCAGCAG...ATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTCTTAGCCAAGGAAGCTaGCTTTTGTGTCGCCACTTC +
Preference number: 2 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLLSQGS*LLCRHF
Trigger: GAAGTGGCGACACAAAAGCCAGCTTCCTTGGCTAAG...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAACTCGGGCTGAAGACTTaGCTCCTGGCCTCCTCACTC +
Preference number: 2 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKLGLKT*LLASSL
Trigger: GAGTGAGGAGGCCAGGAGCCAAGTCTTCAGCCCGAG...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAACAGGGTAGATGCTGCTaGCTTTTCCTGACTGAGCTC +
Preference number: 2 (lower is better)
Translates to: SNLIWRLHEDANALPPLQQGRCC*LFLTEL
Trigger: GAGCTCAGTCAGGAAAAGCCAGCAGCATCTACCCTG...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTGCACCAGGCCACTTTTaGTCTGTGATGTCTACAACT +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGAPGHF*SVMSTT
Trigger: AGTTGTAGACATCACAGATCAAAAGTGGCCTGGTGC...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTGGGGAGAGGAAACTGTaGCTGACATTCATTGCTACT +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGGERKL*LTFIAT
Trigger: AGTAGCAATGAATGTCAGTCACAGTTTCCTCTCCCC...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCCTATTTCAAGGTGTTaGTCTTCCCTGCATCCACAC +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGPISRC*SSLHPH
Trigger: GTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAACCTAAGCACGCCTGGTaGTTCCCTTGTGATCGGGTC +
Preference number: 2 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKPKHAW*FPCDRV
Trigger: GACCCGATCACAAGGGAAGCACCAGGCGTGCTTAGG...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCGAAGAAATGAAGGTTTaGCCAGAAGAACCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASEEMKV*PEEPLR
Trigger: CCTCAGAGGTTCTTCTGGGCAAACCTTCATTTCTTC...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCAAACAGAGAGCTGTGTaGACACTCATGGCAGTTTCA +
Preference number: 2 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASKQRAV*TLMAVS
Trigger: TGAAACTGCCATGAGTGTGCACACAGCTCTCTGTTT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTCACCAAGAAGTAGGTTaGGAACAGGTGTTTTCAGGT +
Preference number: 2 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIHQEVG*EQVFSG
Trigger: ACCTGAAAACACCTGTTCCCAACCTACTTCTTGGTG...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CAA 90 bp ATGGAGAGAAGAAGAAACCAGACAGCATCTGTGAGAACCTACATGTaGGGTGCCCACCAAAATGAAAAACAGCTCCTTGGCCATCAGAAG +
Preference number: 2 (lower is better)
Translates to: MERRRNQTASVRTYM*GAHQNEKQLLGHQK
Trigger: CTTCTGATGGCCAAGGAGCTGTTTTTCATTTTGGTGGGCACCCAACATGTAGGTTCTCACAGATGCTGTCTGGTTTCTTCTTCTCTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGTGCCCTGTCTTGTGTTaGACGGATGTGTGTGTACTG +
Preference number: 2 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRCPVLC*TDVCVL
Trigger: CAGTACACACACATCCGTTCAACACAAGACAGGGCA...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR TCA 90 bp AAAATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTGCTTTGGACCATATCCTGCATTGCTCTTGTaGAGTGGCTGGTTTGGTTCT +
Preference number: 2 (lower is better)
Translates to: KIPRDIFVQTRCSCFGPYPALLL*SGWFGS
Trigger: AGAACCAAACCAGCCACTTCACAAGAGCAATGCAGG...ATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR TCA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGCTTCTTGCTGGGTTCTaGTTTTCTTGGAAGTGCATC +
Preference number: 2 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLLLAGF*FSWKCI
Trigger: GATGCACTTCCAAGAAAATCAGAACCCAGCAAGAAG...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR TCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCATCCAACAATCAGCTTaGTTCAATCAGGCACTGAAT +
Preference number: 2 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACIQQSA*FNQALN
Trigger: ATTCAGTGCCTGATTGAATCAAGCTGATTGTTGGAT...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGTGGAACGCTGTGTGCTaGAAATTGCTTATTAATCAG +
Preference number: 2 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWWNAVC*KLLINQ
Trigger: CTGATTAATAAGCAATTTGCAGCACACAGCGTTCCA...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR GCA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTGGGCAGGTGCTATGGTaGGGGGCGCTGGAAAGAATG +
Preference number: 2 (lower is better)
Translates to: YASLESYCVIMYGSMFTFGQVLW*GALERM
Trigger: CATTCTTTCCAGCGCCCCGCACCATAGCACCTGCCC...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR GCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTAACCAAGAGCAACCATaGTGGAAAACAGTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGNQEQP*WKTVLL
Trigger: GAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCACAGAAGCTACACCATaGTTTGAGGGTAAAGACAGA +
Preference number: 2 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASTEATP*FEGKDR
Trigger: TCTGTCTTTACCCTCAAAGCATGGTGTAGCTTCTGT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTGCCCAAAGTATAAAGTaGAAGCCTTGTTGGAAGAGC +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGAQSIK*KPCWKS
Trigger: GCTCTTCCAACAAGGCTTGCACTTTATACTTTGGGC...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCCTTCTCCCATGCACTaGCCAAAGTATAAAGTGCAA +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGPSPMH*PKYKVQ
Trigger: TTGCACTTTATACTTTGGGCAGTGCATGGGAGAAGG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTAAGACAGGAGAGCTGCTaGGAAGCCATGTTTTTGATT +
Preference number: 2 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLRQESC*EAMFLI
Trigger: AATCAAAAACATGGCTTCCCAGCAGCTCTCCTGTCT...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGCCACTTAAAACGATTTaGTCAACTTGCACCAAGAAG +
Preference number: 2 (lower is better)
Translates to: RPFASCCLFPATPVRAPQPLKTI*STCTKK
Trigger: CTTCTTGGTGCAAGTTGACCAAATCGTTTTAAGTGG...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTCAACCCTGCTACGGTTaGAAAGAGTTACCACTTAAA +
Preference number: 2 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIQPCYG*KELPLK
Trigger: TTTAAGTGGTAACTCTTTCCAACCGTAGCAGGGTTG...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAACCCAGTACAAACAGCTaGGAAGCCCAAGGAGCACTC +
Preference number: 2 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKPSTNS*EAQGAL
Trigger: GAGTGCTCCTTGGGCTTCCCAGCTGTTTGTACTGGG...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAAGAGGCCCTGGTATGGTaGCACATCAGGGAGCTATCC +
Preference number: 2 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKEALVW*HIRELS
Trigger: GGATAGCTCCCTGATGTGCCACCATACCAGGGCCTC...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAAGTGAGGCCCTGGTATaGTGGCACATCAGGGAGCTA +
Preference number: 2 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKSEALV*WHIREL
Trigger: TAGCTCCCTGATGTGCCACCATACCAGGGCCTCACT...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTAGGCATTTAGTTTGTTaGCCTACTGGTGACAACAGT +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGRHLVC*PTGDNS
Trigger: ACTGTTGTCACCAGTAGGTCAACAAACTAAATGCCT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTACGTCCGTTTGCAAGTTaGTGTTTGTTTCCAGCTACA +
Preference number: 2 (lower is better)
Translates to: KMGFLPSHRECICIPGILRPFAS*CLFPAT
Trigger: TGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR GCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTTTCCACATGAAAGCTTaGACTTTGGGGAATAGGATC +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGFHMKA*TLGNRI
Trigger: GATCCTATTCCCCAAAGTGCAAGCTTTCATGTGGAA...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTAAAGACCTGGGGGACTaGAGTCTCCCCAAAGTCAGA +
Preference number: 2 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALKDLGD*SLPKVR
Trigger: TCTGACTTTGGGGAGACTCCAGTCCCCCAGGTCTTT...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTTTAAATCCCAACAACTaGGAGAGGTGTGTACATGTG +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGLNPNN*ERCVHV
Trigger: CACATGTACACACCTCTCCCAGTTGTTGGGATTTAA...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCAGAGTAACCTGATCTaGAGACTACATGAAGATGCA +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGQSNLI*RLHEDA
Trigger: TGCATCTTCATGTAGTCTCCAGATCAGGTTACTCTG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCAAGCTGGTGAGGTTTaGTTAGTTAGGTTTTCACAG +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGQAGEV*LVRFSQ
Trigger: CTGTGAAAACCTAACTAACCAAACCTCACCAGCTTG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCACTTTAGTGAAATATaGCATCACCCAGGACGATCA +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGHFSEI*HHPGRS
Trigger: TGATCGTCCTGGGTGATGCCATATTTCACTAAAGTG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp CGAAAATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTGCTTaGGACCATATTTCGGAAGCAGTTCTAGGAAATAGATTCTTGGAC +
Preference number: 2 (lower is better)
Translates to: RKSRETSLCRHVVPA*DHISEAVLGNRFLD
Trigger: GTCCAAGAATCTATTTCCTAGAACTGCTTCCGAAATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 90 bp GATCCCACCACTGTAGCCCAAATCTCATCAGCATCTTTGGGTGCATaGCCTTCTGTTGTCATACCAGGTCATAAACTTACTGAATTCTCT +
Preference number: 2 (lower is better)
Translates to: DPTTVAQISSASLGA*PSVVIPGHKLTEFS
Trigger: AGAGAATTCAGTAAGTTTATGACCTGGTATGACAACAGAAGGCAATGCACCCAAAGATGCTGATGAGATTTGGGCTACAGTGGTGGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 90 bp ATTACCCATGATCCCACCACTGTAGCCCAAATCTCATCAGCATCTTaGGGTGCATTGCCTTCTGTTGTCATACCAGGTCATAAACTTACT +
Preference number: 2 (lower is better)
Translates to: ITHDPTTVAQISSAS*GALPSVVIPGHKLT
Trigger: AGTAAGTTTATGACCTGGTATGACAACAGAAGGCAATGCACCCAAAGATGCTGATGAGATTTGGGCTACAGTGGTGGGATCATGGGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 90 bp GCTCCGTGGCTAATGTGTGCTTTTGGGAGGACCTTATGTAACCATTaGTTCTCTGGGAGAGATGCCAAGTATTTCAAATGCCTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: APWLMCAFGRTLCNH*FSGRDAKYFKCLKR
Trigger: TCTTTTCAGGCATTTGAAATACTTGGCATCTCTCCCAGAGAACAAATGGTTACATAAGGTCCTCCCAAAAGCACACATTAGCCACGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 90 bp TGCCCTTTTCAAGGATATACCCAAACAGCTAGCACCAGGCCACTTTaGATCTGTGATGTCTACAACTCCAGGCCAAATCATCATACAGAT +
Preference number: 2 (lower is better)
Translates to: CPFQGYTQTASTRPL*ICDVYNSRPNHHTD
Trigger: ATCTGTATGATGATTTGGCCTGGAGTTGTAGACATCACAGATCAAAAGTGGCCTGGTGCTAGCTGTTTGGGTATATCCTTGAAAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTGCCCAGAAGAACCTCTaGGGTCCCTTCCAGTTTAAA +
Preference number: 2 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVAQKNL*GPFQFK
Trigger: TTTAAACTGGAAGGGACCTCAGAGGTTCTTCTGGGC...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTAAACAAAATAATGATTaGAGCGTGTTTTGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: QDATPALLIGPKKERAMGKQNND*SVFCSG
Trigger: CCCCGAGCAAAACACGCTTCAATCATTATTTTGTTT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGGCCAAGTATTTCAAATaGCTGAAAAGAGGAGCTCTA +
Preference number: 2 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLAKYFK*LKRGAL
Trigger: TAGAGCTCCTCTTTTCAGGCATTTGAAATACTTGGC...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR GCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAACTTGTCATTAGGACTTaGTGTTTATCTTGCCCACCT +
Preference number: 2 (lower is better)
Translates to: SNLIWRLHEDANALPPLQLVIRT*CLSCPP
Trigger: AGGTGGGCAAGATAAACAGCAAGTCCTAATGACAAG...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAAAACAGGAGGGTGAGCTaGATAATTGAACATACACAG +
Preference number: 2 (lower is better)
Translates to: SNLIWRLHEDANALPPLQNRRVS*IIEHTQ
Trigger: CTGTGTATGTTCAATTATGCAGCTCACCCTCCTGTT...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTTCACCTCAGCAAACGTaGTCCACCAGGCTCAAAGAA +
Preference number: 2 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVSPQQT*STRLKE
Trigger: TTCTTTGAGCCTGGTGGAGCACGTTTGCTGAGGTGA...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCGTGAAACCCCGCAGTaGAACGCTGTGTGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNRETPQ*NAVCCK
Trigger: TTTGCAGCACACAGCGTTCCACTGCGGGGTTTCACG...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp TGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATTTGTCCAGGTATTGCACTaGATCTCGGCTTTGCTTAAC +
Preference number: 2 (lower is better)
Translates to: CVVCLKLHSDGLLPTLVFVQVLH*ISALLN
Trigger: GTTAAGCAAAGCCGAGATCCAGTGCAATACCTGGAC...AAATACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTTGAGACACACTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAAATGAGATCTGCAGGCTaGGTAAAGACCTGGGGGACT +
Preference number: 2 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKMRSAG*VKTWGT
Trigger: AGTCCCCCAGGTCTTTACCCAGCCTGCAGATCTCAT...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp CCTGCTTTGGACCATATTTCGGAAGCAGTTCTAGGAAATAGATTCTaGGACTGCATCACTATTTTTATGGCCAAAATGGGTTTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: PALDHISEAVLGNRF*DCITIFMAKMGFLP
Trigger: GGGCAGGAAACCCATTTTGGCCATAAAAATAGTGATGCAGTCCAAGAATCTATTTCCTAGAACTGCTTCCGAAATATGGTCCAAAGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 90 bp CTATTGAGTCAGGAGACCCCTACACTAGCTATTGTCCTAGAAAGATaGGTTGAGAGGTCTCAGGAAACCCTTTGGAAATCTGAATGCATT +
Preference number: 2 (lower is better)
Translates to: LLSQETPTLAIVLER*VERSQETLWKSECI
Trigger: AATGCATTCAGATTTCCAAAGGGTTTCCTGAGACCTCTCAACCAATCTTTCTAGGACAATAGCTAGTGTAGGGGTCTCCTGACTCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp TTTGGGTTGGGAACATGGTGCTTCGTACCAATGAAAAATACCATCTaGTACTCAGGACAAAGCTTCAGCCATCAGTGGGAAAGAACAGTT +
Preference number: 2 (lower is better)
Translates to: FGLGTWCFVPMKNTI*YSGQSFSHQWERTV
Trigger: AACTGTTCTTTCCCACTGATGGCTGAAGCTTTGTCCTGAGTACAAGATGGTATTTTTCATTGGTACGAAGCACCATGTTCCCAACCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp AAGCCAGGTTATAGGATTACCCATGTTAGCAGTGTGGTCCTCTTCTaGATACCTGAGGTTGTTGAGGGTAATGTATGTGTGCTTCTTAGA +
Preference number: 2 (lower is better)
Translates to: KPGYRITHVSSVVLF*IPEVVEGNVCVLLR
Trigger: TCTAAGAAGCACACATACATTACCCTCAACAACCTCAGGTATCAAGAAGAGGACCACACTGCTAACATGGGTAATCCTATAACCTGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTTACCTGATTTTTAAGTaGGCCAGGGCGGACAGCAGC +
Preference number: 2 (lower is better)
Translates to: YASLESYCVIMYGSMFTFYLIFK*ARADSS
Trigger: GCTGCTGTCCGCCCTGGCTCACTTAAAAATCAGGTA...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR TCA 90 bp GCTGGAATAGAAATGAATCTTCCCCTAGTGGCAAACAACCCACAGCAGAAAAGCTCACTTATTGGGCACTaGAATGTGTTAATGTCACCT +
Preference number: 2 (lower is better)
Translates to: AGIEMNLPLVANNPQQKSSLIGH*NVLMSP
Trigger: AGGTGACATTAACACATTTCAGTGCCCAATAAGTGA...GCTTTTCTGCTGTGGGTTGTTTGCCACTAGGGGAAGATTCATTTCTATTCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376581.9
3UTR-3UTR TCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTCTGTTCACCAGAGTGTaGATGGTAAGACTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVLFTRV*MVRLCL
Trigger: CAGACACAGTCTTACCATTCACACTCTGGTGAACAG...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAGGGGATGCTTACATTTaGCGATTCCTGTCATACGCT +
Preference number: 2 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKGDAYI*RFLSYA
Trigger: AGCGTATGACAGGAATCGTCAAATGTAAGCATCCCC...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTTGGAACGCTGTGTGCTaGAAATTGCTTATTAATCAG +
Preference number: 2 (lower is better)
Translates to: TGNRLVHLVRQMINTRQAWNAVC*KLLINQ
Trigger: CTGATTAATAAGCAATTTGCAGCACACAGCGTTCCA...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp TGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATTTAGACAGGAGAGCTGCTaGGAAGCCATGTTTTTGATT +
Preference number: 2 (lower is better)
Translates to: CVVCLKLHSDGLLPTLVFRQESC*EAMFLI
Trigger: AATCAAAAACATGGCTTCCCAGCAGCTCTCCTGTCT...AAATACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTTGAGACACACTACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 90 bp TCAACAAGAGATATATTAATACCGTGCATACACTGTGACATGAGCTaGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGA +
Preference number: 2 (lower is better)
Translates to: STRDILIPCIHCDMS*AFHAQRTTKLIVTG
Trigger: TCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAAGCTCATGTCACAGTGTATGCACGGTATTAATATATCTCTTGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAATTGAGCCAGGGTGTGTaGCAACAGTCTGTACAAACT +
Preference number: 2 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKLSQGV*QQSVQT
Trigger: AGTTTGTACAGACTGTTGTCACACACCCTGGCTCAA...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAAGGGAAGATGTCATTTaGCACTCTCGTAATGACAAT +
Preference number: 2 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPREDVI*HSRNDN
Trigger: ATTGTCATTACGAGAGTGCCAAATGACATCTTCCCT...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp AAAATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTGCTTTGGACCATATCCACTTAAAACGATTTaGTCAACTTGCACCAAGAAG +
Preference number: 2 (lower is better)
Translates to: KIPRDIFVQTRCSCFGPYPLKTI*STCTKK
Trigger: CTTCTTGGTGCAAGTTGACCAAATCGTTTTAAGTGG...ATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAACTTGCCCACCTTTTCTaGAAAGCAAGCCACTTATGT +
Preference number: 2 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKLAHLF*KASHLC
Trigger: ACATAAGTGGCTTGCTTTCCAGAAAAGGTGGGCAAG...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAATCACTTCATGAGGCATaGACAAAGCAGCCCTCCTTT +
Preference number: 2 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKSLHEA*TKQPSF
Trigger: AAAGGAGGGCTGCTTTGTCCATGCCTCATGAAGTGA...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAACAAGAGCAACCATGCTaGAAAACAGTCCTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKQEQPC*KTVLLC
Trigger: GCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTG...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTAAAATGCAGGAATGCTaGGTGAAAGGCAGTGACACT +
Preference number: 2 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALKMQEC*VKGSDT
Trigger: AGTGTCACTGCCTTTCACCCAGCATTCCTGCATTTT...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAAGATGTCTGTGTCGAGTaGCCAATCTACACCGAAATG +
Preference number: 2 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKDVCVE*PIYTEM
Trigger: CATTTCGGTGTAGATTGGCCACTCGACACAGACATC...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp TTCTTCCTAGCCTTCAACCAGCAAAATAAACAAGCTCCTGAGAACTaGTCATTAGGACTTGCTGTTTATCTTGCCCACCTTTTCTGGAAA +
Preference number: 2 (lower is better)
Translates to: FFLAFNQQNKQAPEN*SLGLAVYLAHLFWK
Trigger: TTTCCAGAAAAGGTGGGCAAGATAAACAGCAAGTCCTAATGACAAGTTCTCAGGAGCTTGTTTATTTTGCTGGTTGAAGGCTAGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 90 bp CCAATAATGGAACACTACACATACATGGCTAGGGTTCAAAGAAACTaGCTCTGTTACAGGGATTACCTAGAAAGACTCTTCTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: PIMEHYTYMARVQRN*LCYRDYLERLFCSS
Trigger: TGAACTGCAGAAGAGTCTTTCTAGGTAATCCCTGTAACAGAGCAAGTTTCTTTGAACCCTAGCCATGTATGTGTAGTGTTCCATTATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR TCA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTCGACAGGCCATAACTTaGGTCTATTGCCTTGCCTTT +
Preference number: 2 (lower is better)
Translates to: YASLESYCVIMYGSMFTFRQAIT*VYCLAF
Trigger: AAAGGCAAGGCAATAGACTCAAGTTATGGCCTGTCG...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR TCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTTCACTGCAGGGAAAGTaGCAAATGCTTTACTTCCTA +
Preference number: 2 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVSLQGK*QMLYFL
Trigger: TAGGAAGTAAAGCATTTGTCACTTTCCCTGCAGTGA...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTAGGGAAGATGTCATTTaGCACTCTCGTAATGACAAT +
Preference number: 2 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLREDVI*HSRNDN
Trigger: ATTGTCATTACGAGAGTGCCAAATGACATCTTCCCT...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACGTCCAGGTATTGCACTaGATCTCGGCTTTGCTTAAC +
Preference number: 2 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNVQVLH*ISALLN
Trigger: GTTAAGCAAAGCCGAGATCCAGTGCAATACCTGGAC...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR TCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACTACCACAAATGGTGCTaGTCAATGACACACGGGTTT +
Preference number: 2 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNYHKWC*SMTHGF
Trigger: AAACCCGTGTGTCATTGATCAGCACCATTTGTGGTA...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR GCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTCATTTTCTATGCTGCTaGCAAATTCTACTCAGTGTC +
Preference number: 2 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALHFLCC*QILLSV
Trigger: GACACTGAGTAGAATTTGGCAGCAGCATAGAAAATG...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTAAAGACATCAGACAGTaGTCCAACAGTGTAAGAACA +
Preference number: 2 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVKDIRQ*SNSVRT
Trigger: TGTTCTTACACTGTTGGAGCACTGTCTGATGTCTTT...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAACAACTACTTAATATGTaGGCTCTGCAGACTTGGAAC +
Preference number: 2 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKQLLNM*ALQTWN
Trigger: GTTCCAAGTCTGCAGAGCGCACATATTAAGTAGTTG...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAATTCATTGTTCCGCCATaGAGAGAAGAAGAAACCAGA +
Preference number: 2 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKFIVPP*REEETR
Trigger: TCTGGTTTCTTCTTCTCTCCATGGCGGAACAATGAA...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTAATATGATCCACCAATaGAAACCTAAACCAAACCAG +
Preference number: 2 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALNMIHQ*KPKPNQ
Trigger: CTGGTTTGGTTTAGGTTTGCATTGGTGGATCATATT...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CCA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTCAACCCTGCTACGGTTaGAAAGAGTTACCACTTAAA +
Preference number: 2 (lower is better)
Translates to: YASLESYCVIMYGSMFTFQPCYG*KELPLK
Trigger: TTTAAGTGGTAACTCTTTCCAACCGTAGCAGGGTTG...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTACATTCAGAGCAGACTaGATTTTGTATATTTGGTGG +
Preference number: 2 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVTFRAD*ILYIWW
Trigger: CCACCAAATATACAAAATCCAGTCTGCTCTGAATGT...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR GCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCAGTGGAACGCTGTGTaGTGCAAATTGCTTATTAAT +
Preference number: 2 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNQWNAV*CKLLIN
Trigger: ATTAATAAGCAATTTGCAGCACACAGCGTTCCACTG...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CCA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTGTCCAGCAAGTAGTTTaGAATCAATCAATCATTCAG +
Preference number: 2 (lower is better)
Translates to: YASLESYCVIMYGSMFTFVQQVV*NQSIIQ
Trigger: CTGAATGATTGATTGATTCCAAACTACTTGCTGGAC...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAATTCTGGACATTCATGTaGACAGATATCATTTGTCAA +
Preference number: 2 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKFWTFM*TDIICQ
Trigger: TTGACAAATGATATCTGTCCACATGAATGTCCAGAA...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp GCCCAGAGCCTGCAGCCTGGGGAGGTACTCAGCCTCTaGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGC +
Preference number: 3 (lower is better)
Translates to: AQSLQPGEVLSL*ETRAVDWVAGS
Trigger: GCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGTACCTCCCCAGGCTGCAGGCTCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp CAGGCCTGGAGCTGCCGAGTGCCCAGGTCAGCGCCCTaGACTGCTTGCGCACTTGCTCACCGAGATGATGCA +
Preference number: 3 (lower is better)
Translates to: QAWSCRVPRSAP*TACALAHRDDA
Trigger: TGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGCTGACCTGGGCACTCGGCAGCTCCAGGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp CTGGGGAGGTACTCAGCCTCTGGGAGACGAGGGCCGTaGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGC +
Preference number: 3 (lower is better)
Translates to: LGRYSASGRRGP*TGWLVAPAFLS
Trigger: GCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGTACCTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 72 bp AGCTGCCGAGTGCCCAGGTCAGCGCCCTGGACTGCTTaGGCACTTGCTCACCGAGATGATGCAGTTGGAGGT +
Preference number: 3 (lower is better)
Translates to: SCRVPRSAPWTA*ALAHRDDAVGG
Trigger: ACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGCTGACCTGGGCACTCGGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp TACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTaGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCG +
Preference number: 3 (lower is better)
Translates to: YTSQSSTERVRS*FSGGQVLWCGA
Trigger: CGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR GCA 72 bp GTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTaGGGGGCGCTGGAAAGAATGGGGTTGAATTGGCCC +
Preference number: 3 (lower is better)
Translates to: VRSWFSGGQVLW*GALERMGLNWP
Trigger: GGGCCAATTCAACCCCATTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CCA 72 bp GAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTaGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAT +
Preference number: 3 (lower is better)
Translates to: ELHREGAFLVLR*AGAMVRGAGKN
Trigger: ATTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CCA 72 bp AGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTGTaGCCCGGAGCTGTTTGTTTGCTCTGCCCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: SGDFWREPDAAV*PGAVCLLCPCL
Trigger: CAGGCAGGGGCAGAGCAAACAAACAGCTCCGGGCCACACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp TACTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTaGCTGGTAGCTCCTGCGTTTTTGAGCTGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: YSASGRRGPWTG*LVAPAFLSCVL
Trigger: CAGGACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp GAGGTACTCAGCCTCTGGGAGACGAGGGCCGTGGACTaGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT +
Preference number: 3 (lower is better)
Translates to: EVLSLWETRAVD*VAGSSCVFELC
Trigger: ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGTACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 72 bp CTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTaGCAAAACCACGGTGGCCATGGCTTAGACTTCCTG +
Preference number: 3 (lower is better)
Translates to: LLKLPLSVHPDG*QNHGGHGLDFL
Trigger: CAGGAAGTCTAAGCCATGGCCACCGTGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp TGCTGTGGGACCTTGCTTGGCGAGGGGGAAAATCTCTaGGTTTCTGGAGTGGGAGGGTTCGTGCAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: CCGTLLGEGENL*VSGVGGFVQQL
Trigger: CAGCTGCTGCACGAACCCTCCCACTCCAGAAACCCAGAGATTTTCCCCCTCGCCAAGCAAGGTCCCACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp CCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATaGCTGCCAAAACCACGGTGGCCATGGCTTAGACTT +
Preference number: 3 (lower is better)
Translates to: PAPEAPTERSPR*LPKPRWPWLRL
Trigger: AAGTCTAAGCCATGGCCACCGTGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CAA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCAGGCCCTCGCCTCCGCTaGTTTGAGACTCTCGTTAGA +
Preference number: 3 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPGPRLR*FETLVR
Trigger: TCTAACGAGAGTCTCAAACAAGCGGAGGCGAGGGCC...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 72 bp AGGTGCTATGGTGCGGGGCGCTGGAAAGAATGGGGTTaGATTGGCCCTCGCCTCCGCTTGTTTGAGACTCTC +
Preference number: 3 (lower is better)
Translates to: RCYGAGRWKEWG*IGPRLRLFETL
Trigger: GAGAGTCTCAAACAAGCGGAGGCGAGGGCCAATTCAACCCCATTCTTTCCAGCGCCCCGCACCATAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR TCA 72 bp GCAGCACACTCCAGTATCTCACAGCACGATTTTCCATaGCCGCACTGGCGGCGCCGGCCCTGTAGAGTTAAC +
Preference number: 3 (lower is better)
Translates to: AAHSSISQHDFP*PHWRRRPCRVN
Trigger: GTTAACTCTACAGGGCCGGCGCCGCCAGTGCGGTCATGGAAAATCGTGCTGTGAGATACTGGAGTGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp CACTGTCCGATGCATTTTACTCCACACACGCACACCTaGCCGGTAGTCCTCGCTCCCTCCTTAGCGTCCTTG +
Preference number: 3 (lower is better)
Translates to: HCPMHFTPHTHT*PVVLAPSLASL
Trigger: CAAGGACGCTAAGGAGGGAGCGAGGACTACCGGGCAGGTGTGCGTGTGTGGAGTAAAATGCATCGGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp CCACCTCCACTCTCAAAGGCCAACAGCGAGCACCCTTaGTGCACTGCACCTGGGAACACACATTTAGGGGAC +
Preference number: 3 (lower is better)
Translates to: PPPLSKANSEHP*CTAPGNTHLGD
Trigger: GTCCCCTAAATGTGTGTTCCCAGGTGCAGTGCAGCAAGGGTGCTCGCTGTTGGCCTTTGAGAGTGGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp ACAGGCAGACGTTTCCCGAGTAGGGGCCAAAGCCACTaGAAACCGTGTTCCCTGTGCAGTCCGACTGACACT +
Preference number: 3 (lower is better)
Translates to: TGRRFPSRGQSH*KPCSLCSPTDT
Trigger: AGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTACTCGGGAAACGTCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CCA 72 bp GACCTTGCTTGGCGAGGGGGAAAATCTCTGGGTTTCTaGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGG +
Preference number: 3 (lower is better)
Translates to: DLAWRGGKSLGF*SGRVRAAAVDW
Trigger: CCAGTCAACAGCTGCTGCACGAACCCTCCCACTCCAGAAACCCAGAGATTTTCCCCCTCGCCAAGCAAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp ATCGGGTCGCGTGATGAGCCCAGTGAGGCCCTGGTATaGTGGCACATCAGGGAGCTATCCTTGTTAGGACTC +
Preference number: 3 (lower is better)
Translates to: IGSRDEPSEALV*WHIRELSLLGL
Trigger: GAGTCCTAACAAGGATAGCTCCCTGATGTGCCACCATACCAGGGCCTCACTGGGCTCATCACGCGACCCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTCCAAAGTCAGAAGGTTaGGAGGGTGGCAGGGTAGAT +
Preference number: 3 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVPKSEG*EGGRVD
Trigger: ATCTACCCTGCCACCCTCCAAACCTTCTGACTTTGG...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp AGGAGACTGCCTTGTCCCCAAGTCTCCAGGAATGAGTaGGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTG +
Preference number: 3 (lower is better)
Translates to: RRLPCPQVSRNE*VVTSGGSLMLL
Trigger: CAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTTGGGGACAAGGCAGTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 72 bp AGCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGATaGTGCAGTTGGAGGTTGCTGATCTGTGCGATTGCT +
Preference number: 3 (lower is better)
Translates to: SALDCLRTCSPR*CSWRLLICAIA
Trigger: AGCAATCGCACAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 72 bp ACATTTTACGTGCTCACTGGGCATCGTGGCTGGGGTTaGCCCTATTTACCCTCGGGCGGGTCTGTAGCTACC +
Preference number: 3 (lower is better)
Translates to: TFYVLTGHRGWG*PYLPSGGSVAT
Trigger: GGTAGCTACAGACCCGCCCGAGGGTAAATAGGGTCAACCCCAGCCACGATGCCCAGTGAGCACGTAAAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 72 bp TTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTaGGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGT +
Preference number: 3 (lower is better)
Translates to: FPATPVRAPQRG*VPGSQVGRCYG
Trigger: ACCATAGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR GCA 72 bp TCAGAGGACAGGGCACCTGCTGTGTATGTGTGGCCGTaGGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGA +
Preference number: 3 (lower is better)
Translates to: SEDRAPAVYVWP*VCTRGCVCVMR
Trigger: TCTCATCACACACACACAGCCACGAGTACACACGCACGGCCACACATACACAGCAGGTGCCCTGTCCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 72 bp AGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCTaGCCAGTACAAACAGCTGGGAAGCCCAAGGAGCAC +
Preference number: 3 (lower is better)
Translates to: RFETAWVRSDPG*PVQTAGKPKEH
Trigger: GTGCTCCTTGGGCTTCCCAGCTGTTTGTACTGGGCAGCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp CCTCCACTCTCAAAGGCCAACAGCGAGCACCCTTGCTaGACTGCACCTGGGAACACACATTTAGGGGACAGA +
Preference number: 3 (lower is better)
Translates to: PPLSKANSEHPC*TAPGNTHLGDR
Trigger: TCTGTCCCCTAAATGTGTGTTCCCAGGTGCAGTGCAGCAAGGGTGCTCGCTGTTGGCCTTTGAGAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp GGCAACATCCGGGGCTTACCTTCAGCTCTCGCACTGTaGGTGAGATCGGGTGAGGCAGTTATAAGTGAGAGC +
Preference number: 3 (lower is better)
Translates to: GNIRGLPSALAL*VRSGEAVISES
Trigger: GCTCTCACTTATAACTGCCTCACCCGATCTCACGCACAGTGCGAGAGCTGAAGGTAAGCCCCGGATGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp TTGAGCGCCAGCATGGGGCTCAAAGGAACTGCTCTCTaGGGCATGTCAGATTTCGGATTTGGGGCTGCACAC +
Preference number: 3 (lower is better)
Translates to: LSASMGLKGTAL*GMSDFGFGAAH
Trigger: GTGTGCAGCCCCAAATCCGAAATCTGACATGCCCCAGAGAGCAGTTCCTTTGAGCCCCATGCTGGCGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp GGGTCGCGTGATGAGCCCAGTGAGGCCCTGGTATGGTaGCACATCAGGGAGCTATCCTTGTTAGGACTCTTT +
Preference number: 3 (lower is better)
Translates to: GSRDEPSEALVW*HIRELSLLGLF
Trigger: AAAGAGTCCTAACAAGGATAGCTCCCTGATGTGCCACCATACCAGGGCCTCACTGGGCTCATCACGCGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTTTGCCCTGTCTTGTGTaGAACGGATGTGTGTGTACT +
Preference number: 3 (lower is better)
Translates to: QSELHREGAFLVLRWAGALPCLV*NGCVCT
Trigger: AGTACACACACATCCGTTCAACACAAGACAGGGCAA...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CAA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTCACTGGATCTCGGCTTaGCTTAACAGAAAACAACCC +
Preference number: 3 (lower is better)
Translates to: QSELHREGAFLVLRWAGAHWISA*LNRKQP
Trigger: GGGTTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTG...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CAA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTCGGGGATGCTTACATTaGACGATTCCTGTCATACGC +
Preference number: 3 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVRGCLH*TIPVIR
Trigger: GCGTATGACAGGAATCGTCAAATGTAAGCATCCCCG...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCCACTGTGACATGAGCTaGGCCTTCCATGCTCAAAGA +
Preference number: 3 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFHCDMS*AFHAQR
Trigger: TCTTTGAGCATGGAAGGCCAAGCTCATGTCACAGTG...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp TGGTTCCATAAGAGAGCCTGCCTCGCCAAGAAGGCGTaGCACGGTTCAGAACAATCCCCACTGTGCTACAGA +
Preference number: 3 (lower is better)
Translates to: WFHKRACLAKKA*HGSEQSPLCYR
Trigger: TCTGTAGCACAGTGGGGATTGTTCTGAACCGTGGCACGCCTTCTTGGCGAGGCAGGCTCTCTTATGGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp ACTCTCAAAGGCCAACAGCGAGCACCCTTGCTGCACTaGACCTGGGAACACACATTTAGGGGACAGAGCAGT +
Preference number: 3 (lower is better)
Translates to: TLKGQQRAPLLH*TWEHTFRGQSS
Trigger: ACTGCTCTGTCCCCTAAATGTGTGTTCCCAGGTGCAGTGCAGCAAGGGTGCTCGCTGTTGGCCTTTGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp GGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTaGTATGAACGGGGAGTCTCTGCAGTCGCCAGACAA +
Preference number: 3 (lower is better)
Translates to: GEPLEGLGSNEY*YERGVSAVARQ
Trigger: TTGTCTGGCGACTGCAGAGACTCCCCGTTCATACCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp CTGCCTCTTGAGGTGCTTATCATCTCTCTGCAGGCTTaGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTG +
Preference number: 3 (lower is better)
Translates to: LPLEVLIISLQA*LWYPLLPSLLL
Trigger: CAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGCCTGCAGAGAGATGATAAGCACCTCAAGAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp ACTCCTCACTCCTCAACATTCTGCAATTGCTGCACCTaGCCCCAGCAGCACACTCCAGTATCTCACAGCACG +
Preference number: 3 (lower is better)
Translates to: TPHSSTFCNCCT*PQQHTPVSHST
Trigger: CGTGCTGTGAGATACTGGAGTGTGCTGCTGGGGCCAGGTGCAGCAATTGCAGAATGTTGAGGAGTGAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp CTCATCATTCTTCCCTCTTGGCCGGTCTGGGGAAGCTaGGTTTGCAGCATCTTGATCAGCTCTTCGGCAGAG +
Preference number: 3 (lower is better)
Translates to: LIILPSWPVWGS*VCSILISSSAE
Trigger: CTCTGCCGAAGAGCTGATCAAGATGCTGCAAACCCAGCTTCCCCAGACCGGCCAAGAGGGAAGAATGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp AAAGGCCAACAGCGAGCACCCTTGCTGCACTGCACCTaGGAACACACATTTAGGGGACAGAGCAGTTGGAAG +
Preference number: 3 (lower is better)
Translates to: KGQQRAPLLHCT*EHTFRGQSSWK
Trigger: CTTCCAACTGCTCTGTCCCCTAAATGTGTGTTCCCAGGTGCAGTGCAGCAAGGGTGCTCGCTGTTGGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGGGCCCTCGCCTCCGCTaGTTTGAGACTCTCGTTAGA +
Preference number: 3 (lower is better)
Translates to: RPFASCCLFPATPVRAPQGPRLR*FETLVR
Trigger: TCTAACGAGAGTCTCAAACAAGCGGAGGCGAGGGCC...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CAA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCCCCTCCTTAGCGTCCTaGGTCTGTGTGCTTTTCCAT +
Preference number: 3 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAPSLAS*VCVLFH
Trigger: ATGGAAAAGCACACAGACCAAGGACGCTAAGGAGGG...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCAAGCTACACCATGCTTaGAGGGTAAAGACAGAACGC +
Preference number: 3 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFKLHHA*RVKTER
Trigger: GCGTTCTGTCTTTACCCTCAAAGCATGGTGTAGCTT...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp CTAGAACAGATGATCTTTAGGGAAACCCTGGTCTCGTaGCCCCAGGTTGCTCGGGCTGAAGACTTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: LEQMIFRETLVS*PQVARAEDLAP
Trigger: AGGAGCCAAGTCTTCAGCCCGAGCAACCTGGGGTCACGAGACCAGGGTTTCCCTAAAGATCATCTGTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp AAAGCTTGTTTACACCTTGCAGTCTGTCACCTGCTTTaGAGGCACAGCCCCGGGCAACGGGGAGAGGAAACT +
Preference number: 3 (lower is better)
Translates to: KACLHLAVCHLL*RHSPGQRGEET
Trigger: AGTTTCCTCTCCCCGTTGCCCGGGGCTGTGCCTTCAAAGCAGGTGACAGACTGCAAGGTGTAAACAAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp GGTCTTAAGATAGCACGTCACAGAGCAGCCAGTGAGTaGCTGGTATCTGAAGGCCTGGGTCCCCTATTGAGT +
Preference number: 3 (lower is better)
Translates to: GLKIARHRAASE*LVSEGLGPLLS
Trigger: ACTCAATAGGGGACCCAGGCCTTCAGATACCAGCCACTCACTGGCTGCTCTGTGACGTGCTATCTTAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTCACTGGATCTCGGCTTaGCTTAACAGAAAACAACCC +
Preference number: 3 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAHWISA*LNRKQP
Trigger: GGGTTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTG...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CAA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGGTGACAGTCCAGGTATaGCACTGGATCTCGGCTTTG +
Preference number: 3 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLVTVQV*HWISAL
Trigger: CAAAGCCGAGATCCAGTGCAATACCTGGACTGTCAC...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CAA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGAAGAATGGGGTTGAATaGGCCCTCGCCTCCGCTTGT +
Preference number: 3 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWKNGVE*ALASAC
Trigger: ACAAGCGGAGGCGAGGGCCAATTCAACCCCATTCTT...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CAA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTAGGAAGGGGCCTATGCTaGCTAGGCAGGCAGCCAGTG +
Preference number: 3 (lower is better)
Translates to: KMGFLPSHRECICIPGILGRGLC*LGRQPV
Trigger: CACTGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCC...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CAA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAAGCTCGGGCTGAAGACTaGGCTCCTGGCCTCCTCACT +
Preference number: 3 (lower is better)
Translates to: SNLIWRLHEDANALPPLQARAED*APGLLT
Trigger: AGTGAGGAGGCCAGGAGCCAAGTCTTCAGCCCGAGC...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCTCTCGTGACCCCAGGTaGCTCGGGCTGAAGACTTGG +
Preference number: 3 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGSRDPR*LGLKTW
Trigger: CCAAGTCTTCAGCCCGAGCAACCTGGGGTCACGAGA...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCGAAGCAGAAATTAAGTaGCTTGCCTGGTACAAAGCC +
Preference number: 3 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFEAEIK*LAWYKA
Trigger: GGCTTTGTACCAGGCAAGCAACTTAATTTCTGCTTC...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp CTGCTGAAAGGCAGTGGGAGGAGACTTTATCATCAGTaGGCCAAAGCCAGGCCTTTCTTCCCGCTTTGGGAT +
Preference number: 3 (lower is better)
Translates to: LLKGSGRRLYHQ*AKARPFFPLWD
Trigger: ATCCCAAAGCGGGAAGAAAGGCCTGGCTTTGGCTCACTGATGATAAAGTCTCCTCCCACTGCCTTTCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp CGAGAAGATGCTGAAGGCTTGGTTTCGAGGCTACCATaGTGTGATGTCTGTGTCGAGTGGCCAATCTACACC +
Preference number: 3 (lower is better)
Translates to: REDAEGLVSRLP*CDVCVEWPIYT
Trigger: GGTGTAGATTGGCCACTCGACACAGACATCACAGCATGGTAGCCTCGAAACCAAGCCTTCAGCATCTTCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp CTAACTACTCCTCACTCCTCAACATTCTGCAATTGCTaGACCTGGCCCCAGCAGCACACTCCAGTATCTCAC +
Preference number: 3 (lower is better)
Translates to: LTTPHSSTFCNC*TWPQQHTPVSH
Trigger: GTGAGATACTGGAGTGTGCTGCTGGGGCCAGGTGCAGCAATTGCAGAATGTTGAGGAGTGAGGAGTAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp ACTCTCGTTAGAAAGGGCTTAGGAAAACCAAGGGAATaGCAGCCACCCCATCACCATCGAGAACAGGCAGAC +
Preference number: 3 (lower is better)
Translates to: TLVRKGLGKPRE*QPPHHHREQAD
Trigger: GTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCCTAAGCCCTTTCTAACGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CCA 72 bp ACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTTGCTaGGTTCTGATTTTCTTGGAAGTGCATCTGCCTTCC +
Preference number: 3 (lower is better)
Translates to: TSVVWGALATSC*VLIFLEVHLPS
Trigger: GGAAGGCAGATGCACTTCCAAGAAAATCAGAACCCAGCAAGAAGTGGCCAGTGCACCCCAAACCACACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp TTAGAGTTGACTGGCAGCATTTCCTGTCGGGGGAGGTaGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: LELTGSISCRGR*GLMELESSPLC
Trigger: ACACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCTCCCCCGACAGGAAATGCTGCCAGTCAACTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp ACCTGCTGTGTATGTGTGGCCGTGCGTGTGTACTCGTaGCTGTGTGTGTGTGATGAGACACTTTGGAAGACT +
Preference number: 3 (lower is better)
Translates to: TCCVCVAVRVYS*LCVCDETLWKT
Trigger: AGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGGCCACACATACACAGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp GGAGTATGGGTAAGGGATTTATCCATCAGCCATTCTTaGTGCTTCTGGAGCGAGCAGCCAGTGTGCGTCCTT +
Preference number: 3 (lower is better)
Translates to: GVWVRDLSISHS*CFWSEQPVCVL
Trigger: AAGGACGCACACTGGCTGCTCGCTCCAGAAGCACCAAGAATGGCTGATGGATAAATCCCTTACCCATACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp GGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTaGGTTGGGAACATGGTGCTTCGTACCAATGAAAAA +
Preference number: 3 (lower is better)
Translates to: GDGGGGGGGGSV*VGNMVLRTNEK
Trigger: TTTTTCATTGGTACGAAGCACCATGTTCCCAACCCAAACACTGCCTCCACCACCACCACCACCACCATCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTTGGGAAGCCATGTTTTaGATTTTCAGACAGGTGTTA +
Preference number: 3 (lower is better)
Translates to: QSELHREGAFLVLRWAGAWEAMF*IFRQVL
Trigger: TAACACCTGTCTGAAAATCAAAAACATGGCTTCCCA...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CAA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGGCACCAAGAAGTAGGTaGGGAACAGGTGTTTTCAGG +
Preference number: 3 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLAPRSR*GTGVFR
Trigger: CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGC...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CAA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGCTCGCCTCCGCTTGTTaGAGACTCTCGTTAGAAAGG +
Preference number: 3 (lower is better)
Translates to: RPFASCCLFPATPVRAPQLASAC*RLSLER
Trigger: CCTTTCTAACGAGAGTCTCAAACAAGCGGAGGCGAG...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CAA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGCTGGAAAGAATGGGGTaGAATTGGCCCTCGCCTCCG +
Preference number: 3 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLLERMG*NWPSPP
Trigger: CGGAGGCGAGGGCCAATTCAACCCCATTCTTTCCAG...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CAA 90 bp GACATCTCCCGTGGGTGTGCCAGTTCTTGTGGAGTTAAGACAGGATTTTTGGAACAAGGAAGCTGGCTTTaGTGTCGCCACTTCCAGGCC +
Preference number: 3 (lower is better)
Translates to: DISRGCASSCGVKTGFLEQGSWL*CRHFQA
Trigger: GGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTTG...TTCCAAAAATCCTGTCTTAACTCCACAAGAACTGGCACACCCACGGGAGATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CAA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCATCATTCTTCCCTCTaGGCCGGTCTGGGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: QDATPALLIGPKKERAMGHHSSL*AGLGKL
Trigger: CAGCTTCCCCAGACCGGCCAAGAGGGAAGAATGATG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCTGGGGAAGCTGGGTTaGCAGCATCTTGATCAGCTC +
Preference number: 3 (lower is better)
Translates to: QDATPALLIGPKKERAMGLGKLG*QHLDQL
Trigger: GAGCTGATCAAGATGCTGCAAACCCAGCTTCCCCAG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp ATAGGAATAACGACAGGTGCCGGGGACTACGTACCATaGTTTCATAGTGCTCTGCAGCCAGCAGGCTCACTA +
Preference number: 3 (lower is better)
Translates to: IGITTGAGDYVP*FHSALQPAGSL
Trigger: TAGTGAGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR TCA 72 bp AGCTCTCAAATCCTTCACCTCTTCCCCATGATTTCATaGCCCCTCCCGCCACCCTGCCATTCATCTAGAAGA +
Preference number: 3 (lower is better)
Translates to: SSQILHLFPMIS*PLPPPCHSSRR
Trigger: TCTTCTAGATGAATGGCAGGGTGGCGGGAGGGGTCATGAAATCATGGGGAAGAGGTGAAGGATTTGAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp AGGTTAGTAGCTCTCAAATCCTTCACCTCTTCCCCATaGTTTCATGACCCCTCCCGCCACCCTGCCATTCAT +
Preference number: 3 (lower is better)
Translates to: RLVALKSFTSSP*FHDPSRHPAIH
Trigger: ATGAATGGCAGGGTGGCGGGAGGGGTCATGAAATCATGGGGAAGAGGTGAAGGATTTGAGAGCTACTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp TTAGCACATCTCCATTCAGACGCAGCACATTTTACGTaGTCACTGGGCATCGTGGCTGGGGTTGACCCTATT +
Preference number: 3 (lower is better)
Translates to: LAHLHSDAAHFT*SLGIVAGVDPI
Trigger: AATAGGGTCAACCCCAGCCACGATGCCCAGTGAGCACGTAAAATGTGCTGCGTCTGAATGGAGATGTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 72 bp CAGGCCTTTCTTCCCGCTTTGGGATTGGGCACAAGCTaGCTGTTAACCATGTACCGGTATTCAAGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: QAFLPALGLGTS*LLTMYRYSRLQ
Trigger: TTGAAGCCTTGAATACCGGTACATGGTTAACAGGCAGCTTGTGCCCAATCCCAAAGCGGGAAGAAAGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp ACCACTCACAGGACGGTGACAGTCCAGGTATTGCACTaGATCTCGGCTTTGCTTAACAGAAAACAACCCTGC +
Preference number: 3 (lower is better)
Translates to: TTHRTVTVQVLH*ISALLNRKQPC
Trigger: GCAGGGTTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTGCAATACCTGGACTGTCACCGTCCTGTGAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CCA 72 bp TTTGAGCCAGGGTGTGTGACAACAGTCTGTACAAACTaGTGTCCATACCAGCAGGTGGGAAGAGCTGTGTCT +
Preference number: 3 (lower is better)
Translates to: FEPGCVTTVCTN*CPYQQVGRAVS
Trigger: AGACACAGCTCTTCCCACCTGCTGGTATGGACACCAGTTTGTACAGACTGTTGTCACACACCCTGGCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTACCGAGATGATGCAGTaGGAGGTTGCTGATCTGTGC +
Preference number: 3 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLTEMMQ*EVADLC
Trigger: GCACAGATCAGCAACCTCCAACTGCATCATCTCGGT...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 72 bp ATTATCTTCCCATTGTGTACACCACTCACAGGACGGTaGCAGTCCAGGTATTGCACTGGATCTCGGCTTTGC +
Preference number: 3 (lower is better)
Translates to: IIFPLCTPLTGR*QSRYCTGSRLC
Trigger: GCAAAGCCGAGATCCAGTGCAATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR TCA 72 bp AGTGGATGGGCCCCTCTGTATGCAGCTTCACGTATCTaGGATCACATCTGTATCTACTCCTACCCAGCAGAA +
Preference number: 3 (lower is better)
Translates to: SGWAPLYAASRI*DHICIYSYPAE
Trigger: TTCTGCTGGGTAGGAGTAGATACAGATGTGATCTCAGATACGTGAAGCTGCATACAGAGGGGCCCATCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
3UTR TCA 72 bp CATGCAAGCTACAGTCACAGATGCGTTCTGTTTCAGTaGGACCTCTCCTCTAGCTACAGTGATCCTGCTCAC +
Preference number: 3 (lower is better)
Translates to: HASYSHRCVLFQ*DLSSSYSDPAH
Trigger: GTGAGCAGGATCACTGTAGCTAGAGGAGAGGTCTCACTGAAACAGAACGCATCTGTGACTGTAGCTTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp GGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTaGAAATTGCTTATTAATCAGAGAAGTGAGTCCTAC +
Preference number: 3 (lower is better)
Translates to: GERETPQWNAVC*KLLINQRSESY
Trigger: GTAGGACTCACTTCTCTGATTAATAAGCAATTTGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR GCA 72 bp TCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTaGTGCAAATTGCTTATTAATCAGAGAAGTGAGTCC +
Preference number: 3 (lower is better)
Translates to: SGERETPQWNAV*CKLLINQRSES
Trigger: GGACTCACTTCTCTGATTAATAAGCAATTTGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR GCA 72 bp ATTAACACACGGCAGGCTCTTCGTCCGTTTGCAAGTTaGTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCA +
Preference number: 3 (lower is better)
Translates to: INTRQALRPFAS*CLFPATPVRAP
Trigger: TGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACGAAGAGCCTGCCGTGTGTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR GCA 72 bp TTACTTTGCAGTGATGCATGGGGGAAGCCAAGTTGGTaGTCTCTTTCCTTTGTCTGTGATGAGGAGTGCCCT +
Preference number: 3 (lower is better)
Translates to: LLCSDAWGKPSW*SLSFVCDEECP
Trigger: AGGGCACTCCTCATCACAGACAAAGGAAAGAGAGCACCAACTTGGCTTCCCCCATGCATCACTGCAAAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 72 bp TTTCTAACTACTCCTCACTCCTCAACATTCTGCAATTaGTGCACCTGGCCCCAGCAGCACACTCCAGTATCT +
Preference number: 3 (lower is better)
Translates to: FLTTPHSSTFCN*CTWPQQHTPVS
Trigger: AGATACTGGAGTGTGCTGCTGGGGCCAGGTGCAGCAATTGCAGAATGTTGAGGAGTGAGGAGTAGTTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp CCCTGCCATTCATCTAGAAGAGGTTTGGGTTTATGCTaGCCCCCTCAGACTGAAAACACCTCCAGTCATACA +
Preference number: 3 (lower is better)
Translates to: PCHSSRRGLGLC*PPQTENTSSHT
Trigger: TGTATGACTGGAGGTGTTTTCAGTCTGAGGGGGGCAGCATAAACCCAAACCTCTTCTAGATGAATGGCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp CCCACACCACTACCGCCTCCACATCTCACTCAAAAGTaGAGTCAATCACTGTCCGATGCATTTTACTCCACA +
Preference number: 3 (lower is better)
Translates to: PTPLPPPHLTQK*SQSLSDAFYST
Trigger: TGTGGAGTAAAATGCATCGGACAGTGATTGACTCCACTTTTGAGTGAGATGTGGAGGCGGTAGTGGTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp CCCTGTGTCACTCTGAACACTGGGGCTTTAGAAACCCTTGCTGGAGTGTCCCCTTGGGAAGCCATGTTTTaGATTTTCAGACAGGTGTTA +
Preference number: 3 (lower is better)
Translates to: PCVTLNTGALETLAGVSPWEAMF*IFRQVL
Trigger: TAACACCTGTCTGAAAATCAAAAACATGGCTTCCCA...AGGGGACACTCCAGCAAGGGTTTCTAAAGCCCCAGTGTTCAGAGTGACACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CAA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCATCAGGGAGCTATCCTaGTTAGGACTCTTTTCAATA +
Preference number: 3 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAIRELS*LGLFSI
Trigger: TATTGAAAAGAGTCCTAACAAGGATAGCTCCCTGAT...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp AAAGGCAAATCCATGGTTGGCTGTCTAGGCTCTCCATaGAAGCTACAGTCACAGATGCGTTCTGTTTCAGTG +
Preference number: 3 (lower is better)
Translates to: KGKSMVGCLGSP*KLQSQMRSVSV
Trigger: CACTGAAACAGAACGCATCTGTGACTGTAGCTTGCATGGAGAGCCTAGACAGCCAACCATGGATTTGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp GGAGAAGCCAGCATTCTTCCCAGTGGTATGAGTCCATaGTTTATTGACGTACTTCATTGTTCCGCCATGGAG +
Preference number: 3 (lower is better)
Translates to: GEASILPSGMSP*FIDVLHCSAME
Trigger: CTCCATGGCGGAACAATGAAGTACGTCAATAAAGCATGGACTCATACCACTGGGAAGAATGCTGGCTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp GGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTaGGCTGTTACTTTCTGTAGACGCACAAAATCAGCC +
Preference number: 3 (lower is better)
Translates to: GVRKLASVYILS*AVTFCRRTKSA
Trigger: GGCTGATTTTGTGCGTCTACAGAAAGTAACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp CTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTaGAGAAGCCAGCATTCTTCCCAGTGGTATGAGTCC +
Preference number: 3 (lower is better)
Translates to: LPCSKNHQAHCY*RSQHSSQWYES
Trigger: GGACTCATACCACTGGGAAGAATGCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp CTGCAGACTTGGAACGACAAAATTAGGGTGGTCAGTTaGCCTTTTCCCAAGACGCTACTCCAGCTTTGCTTA +
Preference number: 3 (lower is better)
Translates to: LQTWNDKIRVVS*PFPKTLLQLCL
Trigger: TAAGCAAAGCTGGAGTAGCGTCTTGGGAAAAGGCCAACTGACCACCCTAATTTTGTCGTTCCAAGTCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCGTTACAGTTTCAGCTTaGTCATGCAATAGCTGTATT +
Preference number: 3 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAVTVSA*SCNSCI
Trigger: AATACAGCTATTGCATGACAAAGCTGAAACTGTAAC...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGTGGGAAGCCATGTTTTaGATTTTCAGACAGGTGTTA +
Preference number: 3 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVWEAMF*IFRQVL
Trigger: TAACACCTGTCTGAAAATCAAAAACATGGCTTCCCA...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CAA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTACACTGGATCTCGGCTTaGCTTAACAGAAAACAACCC +
Preference number: 3 (lower is better)
Translates to: KMGFLPSHRECICIPGILHWISA*LNRKQP
Trigger: GGGTTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTG...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CAA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTTCGTCCGTTTGCAAGTaGCTGTTTGTTTCCAGCTAC +
Preference number: 3 (lower is better)
Translates to: TGNRLVHLVRQMINTRQASSVCK*LFVSSY
Trigger: GTAGCTGGAAACAAACAGCAACTTGCAAACGGACGA...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CAA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCGACTTGCTGTTTATCTaGCCCACCTTTTCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGDLLFI*PTFSGK
Trigger: CTTTCCAGAAAAGGTGGGCAAGATAAACAGCAAGTC...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCAGAAATTAAGTTGCTaGCCTGGTACAAAGCCAGTG +
Preference number: 3 (lower is better)
Translates to: QDATPALLIGPKKERAMGQKLSC*PGTKPV
Trigger: CACTGGCTTTGTACCAGGCAAGCAACTTAATTTCTG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp GTTTCCTTACGTGAGGCCGGCGGCATAAGTCAAAGATaGGTTTTGTCCTTGCGAATCACACAGATTGAGTCT +
Preference number: 3 (lower is better)
Translates to: VSLREAGGISQR*VLSLRITQIES
Trigger: AGACTCAATCTGTGTGATTCGCAAGGACAAAACTCATCTTTGACTTATGCCGCCGGCCTCACGTAAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 72 bp ATGGCCAAAATGGGTTTCCTGCCCTCACATCGGGAATaGATATGCATCCCTGGAATCTTACTGTGTCATCAT +
Preference number: 3 (lower is better)
Translates to: MAKMGFLPSHRE*ICIPGILLCHH
Trigger: ATGATGACACAGTAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTGGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR GCA 72 bp GTAAGACTGTGTCTGTACACCAACCAAGAGCAACCATaGTGGAAAACAGTCCTTCTCTGCGCTGTACACAAT +
Preference number: 3 (lower is better)
Translates to: VRLCLYTNQEQP*WKTVLLCAVHN
Trigger: ATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTACAGACACAGTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp GTGAAATATGGCATCACCCAGGACGATCACTTAGGATaGTTCCACATGAAAGCTTGCACTTTGGGGAATAGG +
Preference number: 3 (lower is better)
Translates to: VKYGITQDDHLG*FHMKACTLGNR
Trigger: CCTATTCCCCAAAGTGCAAGCTTTCATGTGGAAGCATCCTAAGTGATCGTCCTGGGTGATGCCATATTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp AAGATTTCATTTTGTGTTTCCAGGGAGTATTCTGTGTaGGGAACTGTTTCCTTACGTGAGGCCGGCGGCATA +
Preference number: 3 (lower is better)
Translates to: KISFCVSREYSV*GTVSLREAGGI
Trigger: TATGCCGCCGGCCTCACGTAAGGAAACAGTTCCCCACACAGAATACTCCCTGGAAACACAAAATGAAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp AGACTGTGTCTGTACACCAACCAAGAGCAACCATGCTaGAAAACAGTCCTTCTCTGCGCTGTACACAATTCA +
Preference number: 3 (lower is better)
Translates to: RLCLYTNQEQPC*KTVLLCAVHNS
Trigger: TGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTACAGACACAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCAAATATCTCAGAAAATaGCAACGTGCAGCTAAGGCA +
Preference number: 3 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASKYLRK*QRAAKA
Trigger: TGCCTTAGCTGCACGTTGCAATTTTCTGAGATATTT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp CTCATCACGGAACATACCACAAATGGTGCTGATCAATaGCACACGGGTTTTCATGCTTGTGACACAGACAGA +
Preference number: 3 (lower is better)
Translates to: LITEHTTNGADQ*HTGFHACDTDR
Trigger: TCTGTCTGTGTCACAAGCATGAAAACCCGTGTGTCATTGATCAGCACCATTTGTGGTATGTTCCGTGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR TCA 72 bp AAGGATATACCCAAACAGCTAGCACCAGGCCACTTTTaGTCTGTGATGTCTACAACTCCAGGCCAAATCATC +
Preference number: 3 (lower is better)
Translates to: KDIPKQLAPGHF*SVMSTTPGQII
Trigger: GATGATTTGGCCTGGAGTTGTAGACATCACAGATCAAAAGTGGCCTGGTGCTAGCTGTTTGGGTATATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp GTTAGCTTGGTTTCAAGAGCCAGAAAAGGTCATCTATaGGTAATAACAGACTGGTCACCATGCCACTGCAGG +
Preference number: 3 (lower is better)
Translates to: VSLVSRARKGHL*VITDWSPCHCR
Trigger: CCTGCAGTGGCATGGTGACCAGTCTGTTATTACTCATAGATGACCTTTTCTGGCTCTTGAAACCAAGCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp CAGCATTCTTCCCAGTGGTATGAGTCCATGCTTTATTaGCGTACTTCATTGTTCCGCCATGGAGAGAAGAAG +
Preference number: 3 (lower is better)
Translates to: QHSSQWYESMLY*RTSLFRHGEKK
Trigger: CTTCTTCTCTCCATGGCGGAACAATGAAGTACGTCAATAAAGCATGGACTCATACCACTGGGAAGAATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp AAAGGCCTGAAACTCTACAGTTCAGTTTTGCTAATTTaGGCTGCATCTGTGGAGAAGAGGCCCCTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: KGLKLYSSVLLI*AASVEKRPLLS
Trigger: AGAGAGAAGGGGCCTCTTCTCCACAGATGCAGCTCAAATTAGCAAAACTGAACTGTAGAGTTTCAGGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp ATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTaGTTTGGACCATATTTCGGAAGCAGTTCTAGGAAA +
Preference number: 3 (lower is better)
Translates to: IPRDIFVQTRCS*FGPYFGSSSRK
Trigger: TTTCCTAGAACTGCTTCCGAAATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp GAAAGCCACTCCAAGACAAATCAGAGTAACCTGATCTaGAGACTACATGAAGATGCAAATGCACTGCCTCCA +
Preference number: 3 (lower is better)
Translates to: ESHSKTNQSNLI*RLHEDANALPP
Trigger: TGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACTCTGATTTGTCTTGGAGTGGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTTTGCCCTGTCTTGTGTaGAACGGATGTGTGTGTACT +
Preference number: 3 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLLPCLV*NGCVCT
Trigger: AGTACACACACATCCGTTCAACACAAGACAGGGCAA...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CAA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTGGAGAAGATTTCATTTaGTGTTTCCAGGGAGTATTC +
Preference number: 3 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLGEDFI*CFQGVF
Trigger: GAATACTCCCTGGAAACACAAAATGAAATCTTCTCC...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CAA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAACAAGCTCCTGAGAACTaGTCATTAGGACTTGCTGTT +
Preference number: 3 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQQAPEN*SLGLAV
Trigger: AACAGCAAGTCCTAATGACAAGTTCTCAGGAGCTTG...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp AAATGCCTGAAAAGAGGAGCTCTAGATTGGAACGTTTaGGATAAGCCTGGTCAAAGACATCCTCAGCCATCT +
Preference number: 3 (lower is better)
Translates to: KCLKRGALDWNV*DKPGQRHPQPS
Trigger: AGATGGCTGAGGATGTCTTTGACCAGGCTTATCTCAAACGTTCCAATCTAGAGCTCCTCTTTTCAGGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 72 bp ATTCAAAGGCAGGCATTTAGTTTGTTGACCTACTGGTaGCAACAGTGCCTATTTCAAGGTGTTGCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: IQRQAFSLLTYW*QQCLFQGVALP
Trigger: GGGAAGAGCAACACCTTGAAATAGGCACTGTTGTCACCAGTAGGTCAACAAACTAAATGCCTGCCTTTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp CGCTGTACACAATTCAAAGGCAGGCATTTAGTTTGTTaGCCTACTGGTGACAACAGTGCCTATTTCAAGGTG +
Preference number: 3 (lower is better)
Translates to: RCTQFKGRHLVC*PTGDNSAYFKV
Trigger: CACCTTGAAATAGGCACTGTTGTCACCAGTAGGTCAACAAACTAAATGCCTGCCTTTGAATTGTGTACAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp TTCTGGACATTCATGTGGACAGATATCATTTGTCAATaGGACGAGCCGATCCTCCTCCATTTTCTATGCTGC +
Preference number: 3 (lower is better)
Translates to: FWTFMWTDIICQ*DEPILLHFLCC
Trigger: GCAGCATAGAAAATGGAGGAGGATCGGCTCGTCTCATTGACAAATGATATCTGTCCACATGAATGTCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp TTGTTACTGGAGAAGCCAGCATTCTTCCCAGTGGTATaGGTCCATGCTTTATTGACGTACTTCATTGTTCCG +
Preference number: 3 (lower is better)
Translates to: LLLEKPAFFPVV*VHALLTYFIVP
Trigger: CGGAACAATGAAGTACGTCAATAAAGCATGGACTCATACCACTGGGAAGAATGCTGGCTTCTCCAGTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp ATAAGTGAGAGCATGCTGGACACCTTGACTTTGCAGTaGCGTGGAACAGAAAAAGCATTCACCTCATCATTG +
Preference number: 3 (lower is better)
Translates to: ISESMLDTLTLQ*RGTEKAFTSSL
Trigger: CAATGATGAGGTGAATGCTTTTTCTGTTCCACGTCACTGCAAAGTCAAGGTGTCCAGCATGCTCTCACTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp CCTAGTGGCAAACAACCCACAGCAGAAAAGCTGTATTaGTTCCCTTTAAGAGGCACCAAATCTAGTAGATCA +
Preference number: 3 (lower is better)
Translates to: PSGKQPTAEKLY*FPLRGTKSSRS
Trigger: TGATCTACTAGATTTGGTGCCTCTTAAAGGGAAGCAATACAGCTTTTCTGCTGTGGGTTGTTTGCCACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
3UTR GCA 72 bp CAGTGCTCCAACAGTGTAAGAACAGAAGCTACACCATaGTTTGAGGGTAAAGACAGAACGCTGAAAACAAAG +
Preference number: 3 (lower is better)
Translates to: QCSNSVRTEATP*FEGKDRTLKTK
Trigger: CTTTGTTTTCAGCGTTCTGTCTTTACCCTCAAAGCATGGTGTAGCTTCTGTTCTTACACTGTTGGAGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp TTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTaGAATCTTACTGTGTCATCATGTATGGATCAATGT +
Preference number: 3 (lower is better)
Translates to: FPALTSGMHMHP*NLTVSSCMDQC
Trigger: ACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp CCTAAAAGTCACAGCTTCATTTTAAATCCCAACAACTaGGAGAGGTGTGTACATGTGCTCACTAGAGACACC +
Preference number: 3 (lower is better)
Translates to: PKSHSFILNPNN*ERCVHVLTRDT
Trigger: GGTGTCTCTAGTGAGCACATGTACACACCTCTCCCAGTTGTTGGGATTTAAAATGAAGCTGTGACTTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp AAAATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTGCTTTGGACCATATTGTGAAGTGGCTGGTTaGGTTCTGTATGTAGCATTT +
Preference number: 3 (lower is better)
Translates to: KIPRDIFVQTRCSCFGPYCEVAG*VLYVAF
Trigger: AAATGCTACATACAGAACCAAACCAGCCACTTCACA...ATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CAA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGCTTGAGTCTATTGCCTaGCCTTTATTACATGTACAT +
Preference number: 3 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLLESIA*PLLHVH
Trigger: ATGTACATGTAATAAAGGCAAGGCAATAGACTCAAG...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR-3UTR CAA 90 bp CCTTTAAGAGGCACCAAATCTAGTAGATCAAACCAAGCCTCCTGGAGACCCGTTGTGTTAATGTCACCTTaGAATTTAACTCTGGCCATT +
Preference number: 3 (lower is better)
Translates to: PLRGTKSSRSNQASWRPVVLMSP*NLTLAI
Trigger: AATGGCCAGAGTTAAATTCAAAGGTGACATTAACAC...AACGGGTCTCCAGGAGGCTTGGTTTGATCTACTAGATTTGGTGCCTCTTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376581.9
3UTR TCA 72 bp AAACAGAAAGCCACTCCAAGACAAATCAGAGTAACCTaGTCTGGAGACTACATGAAGATGCAAATGCACTGC +
Preference number: 3 (lower is better)
Translates to: KQKATPRQIRVT*SGDYMKMQMHC
Trigger: GCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACTCTGATTTGTCTTGGAGTGGCTTTCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp ATGCAGGGGCCAATAAAGCTCAAGAAAACGAGTATCTaGATCATTGTGTGTCTCATGTGTAGTGTGTCTCAA +
Preference number: 3 (lower is better)
Translates to: MQGPIKLKKTSI*IIVCLMCSVSQ
Trigger: TTGAGACACACTACACATGAGACACACAATGATGCAGATACTCGTTTTCTTGAGCTTTATTGGCCCCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp CAATCGTACCTTTCTCTCCATATGCTCTTACGGGCTTaGCTAACAGAGAGCCAATATAAAACTCATCAGAGA +
Preference number: 3 (lower is better)
Translates to: QSYLSLHMLLRA*LTESQYKTHQR
Trigger: TCTCTGATGAGTTTTATATTGGCTCTCTGTTAGCCAAGCCCGTAAGAGCATATGGAGAGAAAGGTACGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAATCAGCATTGCTTGGCTaGAATCTTCAAATAAGTTCT +
Preference number: 3 (lower is better)
Translates to: SNLIWRLHEDANALPPLQSALLG*NLQISS
Trigger: AGAACTTATTTGAAGATTCAAGCCAAGCAATGCTGA...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAAGACGCTACTCCAGCTTaGCTTATAGGGCCTAAGAAA +
Preference number: 3 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKDATPA*LIGPKK
Trigger: TTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTC...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp AGTTTGGAATCAATCAATCATTCAGAAATAAATAGCTaGGGAGACTGCCTTGTCCCCAAGTCTCCAGGAATG +
Preference number: 3 (lower is better)
Translates to: SLESINHSEINS*GDCLVPKSPGM
Trigger: CATTCCTGGAGACTTGGGGACAAGGCAGTCTCCTCAGCTATTTATTTCTGAATGATTGATTGATTCCAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 72 bp TCTATCATTTCCCACTTTAAGGCCAGCTATCAATCCTaGTTCATAATAAAGCAGACTCACTCCCTCACAACC +
Preference number: 3 (lower is better)
Translates to: SIISHFKASYQS*FIIKQTHSLTT
Trigger: GGTTGTGAGGGAGTGAGTCTGCTTTATTATGAATCAGGATTGATAGCTGGCCTTAAAGTGGGAAATGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp ATCAACAAGAGATATATTAATACCGTGCATACACTGTaGCATGAGCTTGGCCTTCCATGCTCAAAGAACCAC +
Preference number: 3 (lower is better)
Translates to: INKRYINTVHTL*HELGLPCSKNH
Trigger: GTGGTTCTTTGAGCATGGAAGGCCAAGCTCATGTCACAGTGTATGCACGGTATTAATATATCTCTTGTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp ATCTGCCTTCCTTATCCAATAGTTTTATCCCTGCATTaGTCTTGTGAAGTGGCTGGTTTGGTTCTGTATGTA +
Preference number: 3 (lower is better)
Translates to: ICLPYPIVLSLH*SCEVAGLVLYV
Trigger: TACATACAGAACCAAACCAGCCACTTCACAAGAGCAATGCAGGGATAAAACTATTGGATAAGGAAGGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CCA 72 bp TCGGCTTTGCTTAACAGAAAACAACCCTGCTACGGTTaGAAAGAGTTACCACTTAAAACGATTTGGTCAACT +
Preference number: 3 (lower is better)
Translates to: SALLNRKQPCYG*KELPLKTIWST
Trigger: AGTTGACCAAATCGTTTTAAGTGGTAACTCTTTCCAACCGTAGCAGGGTTGTTTTCTGTTAAGCAAAGCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR-3UTR CAA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTGATCCAACAATCAGCTaGATTCAATCAGGCACTGAA +
Preference number: 3 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVDPTIS*IQSGTE
Trigger: TTCAGTGCCTGATTGAATCAAGCTGATTGTTGGATC...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR-3UTR CAA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTGCTATCAATTTACATTaGGCCTTGAATAGTGCCAAT +
Preference number: 3 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVAINLH*ALNSAN
Trigger: ATTGGCACTATTCAAGGCCAAATGTAAATTGATAGC...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp AAGCCTAGAGACGAGGTTACAGTTTCAGCTTTGTCATaGAATAGCTGTATTAGTTATGCAAAGTCACTTAAC +
Preference number: 3 (lower is better)
Translates to: KPRDEVTVSALS*NSCISYAKSLN
Trigger: GTTAAGTGACTTTGCATAACTAATACAGCTATTGCATGACAAAGCTGAAACTGTAACCTCGTCTCTAGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp CGAATACTGATTACAGGTATGAAACAGAGAGCTGTGTaGACACTCATGGCAGTTTCAACAACATTTAAAATG +
Preference number: 3 (lower is better)
Translates to: RILITGMKQRAV*TLMAVSTTFKM
Trigger: CATTTTAAATGTTGTTGAAACTGCCATGAGTGTGCACACAGCTCTCTGTTTCATACCTGTAATCAGTATTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp CAAGATAAACAATCCGAGGCTTTGAAAATGTACAGGTaGCGTGGTCCAAACAAAATATGTAACTCATTTACC +
Preference number: 3 (lower is better)
Translates to: QDKQSEALKMYR*RGPNKICNSFT
Trigger: GGTAAATGAGTTACATATTTTGTTTGGACCACGTCACCTGTACATTTTCAAAGCCTCGGATTGTTTATCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp CTAGATAGGTACATGCTGACAAGACACTGCATACAATaGAACAACGGAAAATGTTTTCCCAAACTGATTAAA +
Preference number: 3 (lower is better)
Translates to: LDRYMLTRHCIQ*NNGKCFPKLIK
Trigger: TTTAATCAGTTTGGGAAAACATTTTCCGTTGTTCCATTGTATGCAGTGTCTTGTCAGCATGTACCTATCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp CGCCTATCTAATAAAATATTGTCAATGGCATACAGATaGCTGTTCAAGGAGCTGAAGCCATTTATTTTGAGT +
Preference number: 3 (lower is better)
Translates to: RLSNKILSMAYR*LFKELKPFILS
Trigger: ACTCAAAATAAATGGCTTCAGCTCCTTGAACAGTCATCTGTATGCCATTGACAATATTTTATTAGATAGGCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR GCA 72 bp AAACATAGGAGATTTTCTCTCTATGTGCCCAGAATATaGTCAAAAGGCCCAAGTAGGAAATATATTAGAGAT +
Preference number: 3 (lower is better)
Translates to: KHRRFSLYVPRI*SKGPSRKYIRD
Trigger: ATCTCTAATATATTTCCTACTTGGGCCTTTTGAGCATATTCTGGGCACATAGAGAGAAAATCTCCTATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CCA 72 bp ATATGCATCCCTGGAATCTTACTGTGTCATCATGTATaGATCAATGTTCACTTTTTGACAATTGATCGTAAG +
Preference number: 3 (lower is better)
Translates to: ICIPGILLCHHV*INVHFLTIDRK
Trigger: CTTACGATCAATTGTCAAAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR TCA 72 bp ATAAATTCAAAGCAAGGCGTAAATAGACTACTTCAATaGACAACTCTCAAACGATCCAACAATCAGCTTGAT +
Preference number: 3 (lower is better)
Translates to: INSKQGVNRLLQ*TTLKRSNNQLD
Trigger: ATCAAGCTGATTGTTGGATCGTTTGAGAGTTGTTCATTGAAGTAGTCTATTTACGCCTTGCTTTGAATTTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR TCA 72 bp AACATGGTTCTGTTGTTAGGTAAAATGAGCCCGGTTTaGTTTATATGGCATTATAAAGCTTGTTTACACCTT +
Preference number: 3 (lower is better)
Translates to: NMVLLLGKMSPV*FIWHYKACLHL
Trigger: AAGGTGTAAACAAGCTTTATAATGCCATATAAATCAAACCGGGCTCATTTTACCTAACAACAGAACCATGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGGCTCAGGTCATCCTCTaGCTCCTGGTCAGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTAQVIL*LLVSRG
Trigger: ACCGCGGCTGACCAGGAGTCAGAGGATGACCTGAGC...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGGCAGCTCTGGCCCCCTaGAGATTCGGCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTAALAP*RFGTFS
Trigger: GGAGAAGGTGCCGAATCTCCAGGGGGCCAGAGCTGC...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGGGGAGACGAGGGCCGTaGACTGGGTGGCTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: PPADARTGGGSAVHSDAEGRRGP*TGWLVA
Trigger: AGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCC...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTACGGCTCGGCAGTCCCTaGAGTCGGCGTGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLRLGSP*SRRGSA
Trigger: CGCCGAGCCACGCCGACTTCAGGGACTGCCGAGCCG...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGGCCAGGCCCAGCCTTTaGGACGGGTTTACTGTCACC +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTARPSL*DGFTVT
Trigger: GGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGC...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAGCGGCTCCGTCCGCCTaGTTGTTACCCGCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEAAPSA*LLPAGL
Trigger: AAGCCCCGCGGGTAACAAGCAGGCGGACGGAGCCGC...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCACCGAGCCATCAAAGGTaGCGCGGGGCGGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPPSHQR*RGAEGR
Trigger: CCTCCCCTCCGCCCCGCGCCACCTTTGATGGCTCGG...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAGTCCGGGGGCAGGCCTaGTCATTCAGCAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEVRGQA*SFSSGL
Trigger: CAGCCCGCTGCTGAATGACCAGGCCTGCCCCCGGAC...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGTCCCTGAAGTCGGCGTaGCTCGGCGGGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PPADARTGGGSAVHSDAESLKSA*LGGWCL
Trigger: CAAACACCACCCGCCGAGCCACGCCGACTTCAGGGA...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGGGACACGAGTTTTCCTaGAGGTGTTGGGGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTGHEFS*RCWGRL
Trigger: AAGCCGCCCCCAACACCTTCAGGAAAACTCGTGTCC...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGATCAAGGGAGAGGCCTaGTTGGTGTCGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PPADARTGGGSAVHSDAEIKGEA*LVSGLR
Trigger: CCTGAGCCCCGACACCAAGCAGGCCTCTCCCTTGAT...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTGGTCACTTGCAGGGGTaGCAGCTGCCCCGCCATGCC +
Preference number: 4 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVGHLQG*QLPRHA
Trigger: GGCATGGCGGGGCAGCTGGCACCCCTGCAAGTGACC...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGGACCCGCCGCCTCTaGGGCCGGCGAGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVRTRRL*GRRAGS
Trigger: ACTTCCCGCTCGCCGGCCTCAGAGGCGGCGGGTCCG...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTCTGGCGGTGGCCGGCTaGGGTCCGAGCCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQALAVAG*GPSHQR
Trigger: CCTTTGATGGCTCGGACCTCAGCCGGCCACCGCCAG...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319562.11
ENST00000627049.2
CDS-3UTR GCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGGCAGCTCAAAGTCTCTaGAGAAGTTCTCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTAAQSL*RSSPAA
Trigger: GGCGGCTGGAGAACTTCTGCAGAGACTTTGAGCTGC...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAATCGGCGGGTGGTGTTTaGACAGCCGCTCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKESAGGV*TAAPGP
Trigger: AGGTCCTGGAGCGGCTGTGCAAACACCACCCGCCGA...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTTCGGCGGGTGGTGTTTaGACAGCCGCTCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGASAGGV*TAAPGP
Trigger: AGGTCCTGGAGCGGCTGTGCAAACACCACCCGCCGA...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTACGTGCACCATTGTGTTaGCGCGGTGCGGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLRAPLC*RGAGPG
Trigger: GCCAGGCCCCGCACCGCGGCAACACAATGGTGCACG...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGGGCTTTAGAAACCCTTaGTGGAGTGTCCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTGFRNP*WSVPFP
Trigger: GGGGAAGGGGACACTCCAGCAAGGGTTTCTAAAGCC...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTCCAGCTGCCCCGCCATaGCTCTGGCACACACCGACT +
Preference number: 4 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVPAAPP*LWHTPT
Trigger: AGTCGGTGTGTGCCAGAGGCATGGCGGGGCAGCTGG...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAGCAGCTCTGGCCCCCTaGAGATTCGGCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEAALAP*RFGTFS
Trigger: GGAGAAGGTGCCGAATCTCCAGGGGGCCAGAGCTGC...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTCAGGGAGCCTGTGCTTaGCTGCGGGGGCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGAQGACA*LRGLRF
Trigger: AAACCTCAGCCCCCGCAGCCAAGCACAGGCTCCCTG...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTGTCCGGGGGCAGGCCTaGTCATTCAGCAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAVRGQA*SFSSGL
Trigger: CAGCCCGCTGCTGAATGACCAGGCCTGCCCCCGGAC...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTAGCGTGGCTCGGCGGGTaGTGTTTGCACAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLAWLGG*CLHSRS
Trigger: GGAGCGGCTGTGCAAACACCACCCGCCGAGCCACGC...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTGAGGTACTCAGCCTCTaGGAGACGAGGGCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGAEVLSL*ETRAVD
Trigger: GTCCACGGCCCTCGTCTCCCAGAGGCTGAGTACCTC...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAACATTCAGCAGCGGGCTaGTCAAGGGAGAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEHSAAG*SRERPA
Trigger: AGCAGGCCTCTCCCTTGATCAGCCCGCTGCTGAATG...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAACTGTGCTTCCACAGGTaGGCCGCCAGGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKELCFHR*AARCFM
Trigger: CATGAAGCACCTGGCGGCTCACCTGTGGAAGCACAG...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGGCTCGGCAGTCCCTaGAGTCGGCGTGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVRLGSP*SRRGSA
Trigger: CGCCGAGCCACGCCGACTTCAGGGACTGCCGAGCCG...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGAGGCTGGCAAGGGGATaGTTGTCCTGGTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTRLARG*LSWCDL
Trigger: CAAATCACACCAGGACAATCATCCCCTTGCCAGCCT...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGACTCGCTTTCCGCCCTaGAGTAGTAGACGTGGGACT +
Preference number: 4 (lower is better)
Translates to: PPADARTGGGSAVHSDAETRFPP*SSRRGT
Trigger: AGTCCCACGTCTACTACTTCAGGGCGGAAAGCGAGT...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGAAGTCCTGCTTCACCTaGAGCGCGAACAGGTACCTT +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTKSCFT*SANRYL
Trigger: AAGGTACCTGTTCGCGCTGCAGGTGAAGCAGGACTT...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTCAGTCAGGGAGCCTGTaGTTGGCTGCGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCAQSGSL*LAAGAE
Trigger: CTCAGCCCCCGCAGCCAAGCACAGGCTCCCTGACTG...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTACTCAGGGGCGGGGCTaGTGCTCTTCTCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQATQGRG*CSSPPG
Trigger: ACCTGGCGGAGAAGAGCAGCAGCCCCGCCCCTGAGT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTATTGTGTTGCCGCGGTaGGGGGCCTGGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVIVLPR*GAWRSS
Trigger: GCTGGAGCGCCAGGCCCCGCACCGCGGCAACACAAT...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAGGGCAGGTGCTATGGTaGGGGGCGCTGGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEGQVLW*GALERM
Trigger: CATTCTTTCCAGCGCCCCGCACCATAGCACCTGCCC...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTTCTCAGGTGGGCAGGTaGTATGGTGCGGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCASQVGR*YGAGRW
Trigger: CCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGA...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CCCTGTGTCACTCTGAACACTGGGGCTTTAGAAACCCTTGCTGGAGTGTCCCCTCCTGGAGCTGCCGAGTaGCCAGGTCAGCGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PCVTLNTGALETLAGVSPPGAAE*PGQRPG
Trigger: TCCAGGGCGCTGACCTGGGCACTCGGCAGCTCCAGG...AGGGGACACTCCAGCAAGGGTTTCTAAAGCCCCAGTGTTCAGAGTGACACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTCGCTTTTTGAGGTCCTaGCTGGGGCTGCTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGARFLRS*LGLLRL
Trigger: CAGGCGAAGCAGCCCCAGGCAGGACCTCAAAAAGCG...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595437.5
CDS-3UTR GCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCGAGCCCTCGGTCACTTaGAGGGGTGCCAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAEPSVT*RGASCP
Trigger: GGGGCAGCTGGCACCCCTGCAAGTGACCGAGGGCTC...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCACCTCGCCGGCAGCTCTaGCCCCCTGGAGATTCGGCA +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAAPRRQL*PPGDSA
Trigger: TGCCGAATCTCCAGGGGGCCAGAGCTGCCGGCGAGG...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTCCTCGCCGGCAGCTCTaGCCCCCTGGAGATTCGGCA +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVPRRQL*PPGDSA
Trigger: TGCCGAATCTCCAGGGGGCCAGAGCTGCCGGCGAGG...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CCCTGTGTCACTCTGAACACTGGGGCTTTAGAAACCCTTGCTGGAGTGTCCCCTGCGTGGCTCGGCGGGTaGTGTTTGCACAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PCVTLNTGALETLAGVSPAWLGG*CLHSRS
Trigger: GGAGCGGCTGTGCAAACACCACCCGCCGAGCCACGC...AGGGGACACTCCAGCAAGGGTTTCTAAAGCCCCAGTGTTCAGAGTGACACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCTCCCTGAAGTCGGCGTaGCTCGGCGGGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSSLKSA*LGGWCL
Trigger: CAAACACCACCCGCCGAGCCACGCCGACTTCAGGGA...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTCCTGGTCAGCCGCGGTaGCTTCATCAGGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGAPGQPR*LHQGTC
Trigger: ACAAGTCCCCTGATGAAGCCACCGCGGCTGACCAGG...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAACCTGGTCAGCCGCGGTaGCTTCATCAGGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEPGQPR*LHQGTC
Trigger: ACAAGTCCCCTGATGAAGCCACCGCGGCTGACCAGG...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAAGCGGATGCCAGGACTaGAGGTGGGAGCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKESGCQD*RWERCS
Trigger: TGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCT...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGGTGAGTGGTGACTTCTaGAGGGAGCCTGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: PPADARTGGGSAVHSDAEVSGDF*REPDAA
Trigger: AGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCAC...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTACGAGGGCCGTGGACTaGGTGGCTGGTAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQATRAVD*VAGSSC
Trigger: GCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCACCAGAGCCTGCAGCCTaGGGAGGTACTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPPEPAA*GGTQPL
Trigger: CAGAGGCTGAGTACCTCCCCAGGCTGCAGGCTCTGG...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGCTGGCGGTGGCCGGCTaGGGTCCGAGCCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLLAVAG*GPSHQR
Trigger: CCTTTGATGGCTCGGACCTCAGCCGGCCACCGCCAG...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319562.11
ENST00000627049.2
CDS-3UTR TCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAGGACACGAGTTTTCCTaGAGGTGTTGGGGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEGHEFS*RCWGRL
Trigger: AAGCCGCCCCCAACACCTTCAGGAAAACTCGTGTCC...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAACACGTCAACCTGCCTTaGGCCAAGTCCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEHVNLP*AKSCFT
Trigger: GGTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTG...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTCTTGGCTGCGGGGGCTaGGGTTTACTCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQALGCGG*GLLCWV
Trigger: GACCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAG...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCACATTCAGCAGCGGGCTaGTCAAGGGAGAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPHSAAG*SRERPA
Trigger: AGCAGGCCTCTCCCTTGATCAGCCCGCTGCTGAATG...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGCTGTGCTTCCACAGGTaGGCCGCCAGGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVLCFHR*AARCFM
Trigger: CATGAAGCACCTGGCGGCTCACCTGTGGAAGCACAG...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTGCCGCCGGGAGCTCTTaGTTCCATTCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAAAGSS*FHSPGP
Trigger: AGGCCCTGGAGAATGGAATCAAGAGCTCCCGGCGGC...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCCGCCGGGAGCTCTTaGTTCCATTCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCAAAGSS*FHSPGP
Trigger: AGGCCCTGGAGAATGGAATCAAGAGCTCCCGGCGGC...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTCCTGCTTGTAGTGCATaGGCCGGTGCAGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCAPACSA*AGAVAA
Trigger: TGCGGCCACTGCACCGGCTCATGCACTACAAGCAGG...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGAACTGGCGGCCACGATaGTGGACTGCCGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLNWRPR*WTAAGP
Trigger: GGGGCCAGCGGCAGTCCATCATCGTGGCCGCCAGTT...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTCCTGTGCAGTCCGACTaGCACTACCCCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAPVQSD*HYPMPG
Trigger: CCCAGGCATGGGGTAGTGTCAGTCGGACTGCACAGG...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTCTGCAGGTCGCTTTTTaGGGTCCTGCCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQALQVAF*GPAWGC
Trigger: GCAGCCCCAGGCAGGACCTCAAAAAGCGACCTGCAG...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595437.5
CDS-3UTR GCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCATTACACGTCAACCTaGCTTGAGCCAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTHYTST*LEPSPA
Trigger: AGCAGGACTTGGCTCAAGGCAGGTTGACGTGTAATG...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTCAGTCAGGGAGCCTGTaGTTGGCTGCGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVQSGSL*LAAGAE
Trigger: CTCAGCCCCCGCAGCCAAGCACAGGCTCCCTGACTG...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGTATGAGACTTTTCAGTaGTTCCGGCATGGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTYETFQ*FRHGVL
Trigger: GAGGACGCCATGCCGGAAGCACTGAAAAGTCTCATA...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAACAGAGCTGGTGGCACTaGGGATCACTTCCATCCACC +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEQSWWH*GSLPST
Trigger: GGTGGATGGAAGTGATCCGCAGTGCCACCAGCTCTG...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTTCTCAGGTGGGCAGGTaGTATGGTGCGGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVSQVGR*YGAGRW
Trigger: CCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGA...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGGAGGTTGCTGATCTGTaGGATTGCTGTAGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: PPADARTGGGSAVHSDAEEVADL*DCCSGC
Trigger: GCAACCGCTACAGCAATCGCACAGATCAGCAACCTC...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGAGCTGCCTCTTGAGGTaGTTATCATCTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTSCLLR*LSSLCR
Trigger: CCTGCAGAGAGATGATAAGCACCTCAAGAGGCAGCT...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGTGGGGCTGCTTCGCCTaGGACGTCGCGCGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQWGCFA*DVARGG
Trigger: TCCTCCCCGCGCGACGTCGCAGGCGAAGCAGCCCCA...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595437.5
CDS-3UTR CCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTCAGGGAGCCTGTGCTTaGCTGCGGGGGCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAQGACA*LRGLRF
Trigger: AAACCTCAGCCCCCGCAGCCAAGCACAGGCTCCCTG...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTAAGGGAGAGGCCTGCTTaGTGTCGGGGCTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLRERPA*CRGSGW
Trigger: CCAACCTGAGCCCCGACACCAAGCAGGCCTCTCCCT...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTAGGGAGAGGCCTGCTTaGTGTCGGGGCTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQARERPA*CRGSGW
Trigger: CCAACCTGAGCCCCGACACCAAGCAGGCCTCTCCCT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGAGGTCAATGGCCATCTaGATGTCCTCAACCCACTTC +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTRSMAI*MSSTHF
Trigger: GAAGTGGGTTGAGGACATCCAGATGGCCATTGACCT...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAATCATCCTCTGACTCCTaGTCAGCCGCGGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKESSSDS*SAAVAS
Trigger: TGAAGCCACCGCGGCTGACCAGGAGTCAGAGGATGA...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAACGAGCAGAGGCAGGCTaGCAAGGGGATGATTGTCCT +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKERAEAG*QGDDCP
Trigger: AGGACAATCATCCCCTTGCCAGCCTGCCTCTGCTCG...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGAGCGGATGCCAGGACTaGAGGTGGGAGCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVSGCQD*RWERCS
Trigger: TGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCT...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAAGGGGCCAAAGCCACTaGAAACCGTGTTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKERGQSH*KPCSLC
Trigger: GCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCT...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTGGTGGGCAGGTGCTATaGTGCGGGGCGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAGGQVL*CGALER
Trigger: TCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACC...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAATTCCTGGTTCTCAGGTaGGCAGGTGCTATGGTGCGG +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEFLVLR*AGAMVR
Trigger: CCGCACCATAGCACCTGCCCACCTGAGAACCAGGAA...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGAGAGGGTGCGTTCCTaGTTCTCAGGTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVERVRS*FSGGQV
Trigger: CACCTGCCCACCTGAGAACCAGGAACGCACCCTCTC...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGAAATCTCTGGGTTTCTaGAGTGGGAGGGTTCGTGCA +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTKSLGF*SGRVRA
Trigger: TGCACGAACCCTCCCACTCCAGAAACCCAGAGATTT...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 72 bp GAGTGCCCAGGTCAGCGCCCTGGACTGCTTGCGCACTaGCTCACCGAGATGATGCAGTTGGAGGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: ECPGQRPGLLAH*LTEMMQLEVAD
Trigger: ATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGCTGACCTGGGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAACACGTTCCAAGGTACTaGTCCCCGAATTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEHVPRY*SPNFPG
Trigger: CCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTG...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGACCGTGATCTTTTTGTaGTCAGGAAACTCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTTVIFL*SGNSRP
Trigger: TGGCCTCGAGTTTCCTGATCACAAAAAGATCACGGT...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCCACGTCAACCTGCCTTaGGCCAAGTCCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFHVNLP*AKSCFT
Trigger: GGTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTG...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTAGGCTGGTGCTCTGCTaGGACTGCTCCAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQARLVLC*DCSSTS
Trigger: GGAAGTGCTGGAGCAGTCTCAGCAGAGCACCAGCCT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTAGACAGCTCGGAAAGGTaGGGACTGCCAGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLDSSER*GLPVRE
Trigger: CTCCCTGACTGGCAGTCCTCACCTTTCCGAGCTGTC...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTCATTCAGCAGCGGGCTaGTCAAGGGAGAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAHSAAG*SRERPA
Trigger: AGCAGGCCTCTCCCTTGATCAGCCCGCTGCTGAATG...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTACTGTGCTTCCACAGGTaGGCCGCCAGGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLLCFHR*AARCFM
Trigger: CATGAAGCACCTGGCGGCTCACCTGTGGAAGCACAG...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTCCTGCTTGTAGTGCATaGGCCGGTGCAGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVPACSA*AGAVAA
Trigger: TGCGGCCACTGCACCGGCTCATGCACTACAAGCAGG...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAGCTCAGGTCATCCTCTaGCTCCTGGTCAGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAAAQVIL*LLVSRG
Trigger: ACCGCGGCTGACCAGGAGTCAGAGGATGACCTGAGC...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGTCTCCACTGCGATGCTaGAGTCCACCATGGAGACGC +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVSPLRC*SPPWRR
Trigger: GCGTCTCCATGGTGGACTTCAGCATCGCAGTGGAGA...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTGCTAGTAACAGTGGGTaGGCCGCTCGAGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVASNSG*AARGTG
Trigger: CCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGC...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGTATGAGACTTTTCAGTaGTTCCGGCATGGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: PPADARTGGGSAVHSDAEYETFQ*FRHGVL
Trigger: GAGGACGCCATGCCGGAAGCACTGAAAAGTCTCATA...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCCATCTCCGTGATCTCTaGCAAAGCGGCTCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSHLRDL*QSGSAV
Trigger: GACTGCCGAGCCGCTTTGGCAGAGATCACGGAGATG...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGGCCACGATGATGGACTaGCGCTGGCCCCGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQATMMD*RWPRRV
Trigger: GACCCTCCGGGGCCAGCGGCAGTCCATCATCGTGGC...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGATTGTGTTGCCGCGGTaGGGGGCCTGGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVIVLPR*GAWRSS
Trigger: GCTGGAGCGCCAGGCCCCGCACCGCGGCAACACAAT...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCCAGGAAAGCAGCCACTaGGGAAACGAGTGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSQESSH*GNECVR
Trigger: CCGGACACACTCGTTTCCGCAGTGGCTGCTTTCCTG...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCAGCTCCACAGAGAGGGTaGGTTCCTGGTTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPAPQRG*VPGSQV
Trigger: CACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGC...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCGCTACCACTGGAACCTaGCTCAGCGTCAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSATTGT*LSVNCC
Trigger: GCAGCAGTTGACGCTGAGGCAGGTTCCAGTGGTAGC...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGTCTGGAAGGGGCCTATaGTTGCTAGGCAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVSGRGL*LLGRQP
Trigger: TGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCCAGA...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGTGTCCTCAGATGAGCTaGCTCTTGAGGTGCTTATCA +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTCPQMS*LLRCLS
Trigger: TGATAAGCACCTCAAGAGGCAGCTCATCTGAGGACA...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCGAGGACTTCGCAGAGTaGGGGGAAGCCCTACGCCCA +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAEDFAE*GEALRP
Trigger: TGGGCGTAGGGCTTCCCCGCACTCTGCGAAGTCCTC...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTCCGAGCCATCAAAGGTaGCGCGGGGCGGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIPSHQR*RGAEGR
Trigger: CCTCCCCTCCGCCCCGCGCCACCTTTGATGGCTCGG...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319562.11
ENST00000627049.2
CDS-3UTR CCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTGAGCAGGGCTGGCGGTaGCCGGCTGAGGTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLEQGWR*PAEVRA
Trigger: GGCTCGGACCTCAGCCGGCCACCGCCAGCCCTGCTC...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATGAGCAGGGCTGGCGGTaGCCGGCTGAGGTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYEQGWR*PAEVRA
Trigger: GGCTCGGACCTCAGCCGGCCACCGCCAGCCCTGCTC...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319562.11
ENST00000627049.2
CDS-3UTR CCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGCCTCGCCGGCAGCTCTaGCCCCCTGGAGATTCGGCA +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQPRRQL*PPGDSA
Trigger: TGCCGAATCTCCAGGGGGCCAGAGCTGCCGGCGAGG...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTAGGGAGAGGCCTGCTTaGTGTCGGGGCTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVRERPA*CRGSGW
Trigger: CCAACCTGAGCCCCGACACCAAGCAGGCCTCTCCCT...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTTCAGTGCTTCCGGCATaGCGTCCTCTTTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGASVLPA*RPLCSL
Trigger: CAGTGAGCAAAGAGGACGCCATGCCGGAAGCACTGA...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGATGATGGACTGCCGCTaGCCCCGGAGGGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLMMDCR*PRRVRQ
Trigger: CTGCCTGACCCTCCGGGGCCAGCGGCAGTCCATCAT...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTGCGAGGCAGAGCTGGTaGCACTGCGGATCACTTCCA +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAARQSW*HCGSLP
Trigger: TGGAAGTGATCCGCAGTGCCACCAGCTCTGCCTCGC...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCGAGGCAGAGCTGGTaGCACTGCGGATCACTTCCA +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCAARQSW*HCGSLP
Trigger: TGGAAGTGATCCGCAGTGCCACCAGCTCTGCCTCGC...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTTGCCAGGACTGGAGGTaGGAGCGCTGTTCATTCAGA +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGACQDWR*ERCSFR
Trigger: TCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCA...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTCACCTTCCACGAGGTTaGGGTGGTTGCAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGAHLPRG*GGCKLH
Trigger: ATGCAGTTTGCAACCACCTCAACCTCGTGGAAGGTG...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTACACGTCAACCTGCCTTaGGCCAAGTCCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLHVNLP*AKSCFT
Trigger: GGTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTG...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTTCGAGAACCTGCTTCTaGGTCCGACCACTGAACCGA +
Preference number: 4 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVSRTCF*VRPLNR
Trigger: TCGGTTCAGTGGTCGGACTCAGAAGCAGGTTCTCGA...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CCCTGTGTCACTCTGAACACTGGGGCTTTAGAAACCCTTGCTGGAGTGTCCCCTGACAGCTCGGAAAGGTaGGGACTGCCAGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PCVTLNTGALETLAGVSPDSSER*GLPVRE
Trigger: CTCCCTGACTGGCAGTCCTCACCTTTCCGAGCTGTC...AGGGGACACTCCAGCAAGGGTTTCTAAAGCCCCAGTGTTCAGAGTGACACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTCCGTGGACTTTAAACTaGTTGGAGGCCGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCAPWTLN*LEAVSP
Trigger: GGGGCTGACGGCCTCCAATCAGTTTAAAGTCCACGG...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTACCGTGGACTTTAAACTaGTTGGAGGCCGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLPWTLN*LEAVSP
Trigger: GGGGCTGACGGCCTCCAATCAGTTTAAAGTCCACGG...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAAGGCTGGCAAGGGGATaGTTGTCCTGGTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKERLARG*LSWCDL
Trigger: CAAATCACACCAGGACAATCATCCCCTTGCCAGCCT...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAACTCAGAGGGGATGGTaGGCGAGTAGCCGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAATQRGW*ASSRAE
Trigger: CTCTGCTCGGCTACTCGCTCACCATCCCCTCTGAGT...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTACAAGAGACTCTTTGTaGCTCAACACGTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGATRDSL*LNTWGR
Trigger: GCGACCCCACGTGTTGAGTCACAAAGAGTCTCTTGT...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGCCTGGGGTCGGCCTCTaGTCTATTTCTCCCATGATG +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVPGVGL*SISPMM
Trigger: CATCATGGGAGAAATAGAGCAGAGGCCGACCCCAGG...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTGCGGCTCCGTCCGCCTaGTTGTTACCCGCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIAAPSA*LLPAGL
Trigger: AAGCCCCGCGGGTAACAAGCAGGCGGACGGAGCCGC...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAATCAAGGGAGAGGCCTaGTTGGTGTCGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAAIKGEA*LVSGLR
Trigger: CCTGAGCCCCGACACCAAGCAGGCCTCTCCCTTGAT...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTGCCACGATGATGGACTaGCGCTGGCCCCGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIATMMD*RWPRRV
Trigger: GACCCTCCGGGGCCAGCGGCAGTCCATCATCGTGGC...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCAGGGGCGGGGCTGCTaGTCTTCTCCGCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVQGRGC*SSPPGQ
Trigger: TTGACCTGGCGGAGAAGAGCAGCAGCCCCGCCCCTG...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGGGCGCTCCAGCGATGTaGGCGAGGCGCTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWGAPAM*ARRSGH
Trigger: ATGACCTGAGCGCCTCGCGCACATCGCTGGAGCGCC...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGGGCGCTCCAGCGATGTaGGCGAGGCGCTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVGAPAM*ARRSGH
Trigger: ATGACCTGAGCGCCTCGCGCACATCGCTGGAGCGCC...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTCAGGAAAGCAGCCACTaGGGAAACGAGTGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAQESSH*GNECVR
Trigger: CCGGACACACTCGTTTCCGCAGTGGCTGCTTTCCTG...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGTCTCAGGTGGGCAGGTaGTATGGTGCGGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVSQVGR*YGAGRW
Trigger: CCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGA...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCGTCCGTTTGCAAGTTaGTGTTTGTTTCCAGCTACA +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTRPFAS*CLFPAT
Trigger: TGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTCAGGGGCTCGGACTCTaGAGGTCGCTTTTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAQGLGL*RSLFEV
Trigger: GACCTCAAAAAGCGACCTGCAGAGTCCGAGCCCCTG...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595437.5
CDS-3UTR CCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTTGCCTTCCCTGTCCTTaGCCGGGTGCAACCGGATTC +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVCLPCP*PGATGF
Trigger: GAATCCGGTTGCACCCGGCCAAGGACAGGGAAGGCA...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCATGCCTTCCCTGTCCTTaGCCGGGTGCAACCGGATTC +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAACLPCP*PGATGF
Trigger: GAATCCGGTTGCACCCGGCCAAGGACAGGGAAGGCA...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATCCTCCTCTTCCTCCGTaGGCGCCGAGGCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYPPLPP*APRRLR
Trigger: ACGGAGCCGCCTCGGCGCCCACGGAGGAAGAGGAGG...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGATGATGGACTGCCGCTaGCCCCGGAGGGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWMMDCR*PRRVRQ
Trigger: CTGCCTGACCCTCCGGGGCCAGCGGCAGTCCATCAT...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTACGAGCAGAGGCAGGCTaGCAAGGGGATGATTGTCCT +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLRAEAG*QGDDCP
Trigger: AGGACAATCATCCCCTTGCCAGCCTGCCTCTGCTCG...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAGGAAAACCAAGGGAATaGCAGCCACCCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEGKPRE*QPPHHH
Trigger: ATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGGGTGGGCAGGTGCTATaGTGCGGGGCGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLGGQVL*CGALER
Trigger: TCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACC...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCCTGCTGCCAATGAGGTaGACACCAGTGTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSLLPMR*TPVWFG
Trigger: CCCAAACCACACTGGTGTCCACCTCATTGGCAGCAG...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCAGTGAGGCCCTGGTATaGTGGCACATCAGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFSEALV*WHIREL
Trigger: TAGCTCCCTGATGTGCCACCATACCAGGGCCTCACT...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp GCCACCTCCACTCTCAAAGGCCAACAGCGAGCACCCTaGCTGCACTGCACCTGGGAACACACATTTAGGGGA +
Preference number: 4 (lower is better)
Translates to: ATSTLKGQQRAP*LHCTWEHTFRG
Trigger: TCCCCTAAATGTGTGTTCCCAGGTGCAGTGCAGCAAGGGTGCTCGCTGTTGGCCTTTGAGAGTGGAGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTTGGCAACGGCCAGATTaGTCTTCGTGCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCAWQRPD*SSCLPC
Trigger: ACAGGGAAGGCACGAAGATCAATCTGGCCGTTGCCA...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTATGGCAACGGCCAGATTaGTCTTCGTGCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLWQRPD*SSCLPC
Trigger: ACAGGGAAGGCACGAAGATCAATCTGGCCGTTGCCA...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTGAAAGCGCTTCCTCTTaGAGCTCAGCTTCCGCACCT +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAESASS*SSASAP
Trigger: AGGTGCGGAAGCTGAGCTTCAAGAGGAAGCGCTTTC...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGATGATTGTCCTGGTGTaGTTTGTAGAAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTMIVLV*FVEEQA
Trigger: TGCCTGTTCTTCTACAAATCACACCAGGACAATCAT...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCATGGAAAGAATGGGGTTaGATTGGCCCTCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAAWKEWG*IGPRLR
Trigger: GCGGAGGCGAGGGCCAATTCAACCCCATTCTTTCCA...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCATACCTGATTTTTAAGTaGGCCAGGGCGGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPYLIFK*ARADSS
Trigger: GCTGCTGTCCGCCCTGGCTCACTTAAAAATCAGGTA...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCAAACTGTTTCCTTACGTaGGGCCGGCGGCATAAGTCA +
Preference number: 4 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPNCFLT*GRRHKS
Trigger: TGACTTATGCCGCCGGCCTCACGTAAGGAAACAGTT...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCAGCCTGGGTAAGAAGTaGCCCTGGCTGCCCAGTACA +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEASLGKK*PWLPST
Trigger: TGTACTGGGCAGCCAGGGTCACTTCTTACCCAGGCT...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCCTCTCGCACTGTGCGTaGGATCGGGTGAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEALSHCA*DRVRQL
Trigger: TAACTGCCTCACCCGATCTCACGCACAGTGCGAGAG...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTCTGTCCTTGGCCGGGTaGAACCGGATTCCATACATC +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQALSLAG*NRIPYI
Trigger: GATGTATGGAATCCGGTTGCACCCGGCCAAGGACAG...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCGCGGCTCCGTCCGCCTaGTTGTTACCCGCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGAAPSA*LLPAGL
Trigger: AAGCCCCGCGGGTAACAAGCAGGCGGACGGAGCCGC...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGTCGGCGGGTGGTGTTTaGACAGCCGCTCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWSAGGV*TAAPGP
Trigger: AGGTCCTGGAGCGGCTGTGCAAACACCACCCGCCGA...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTATCTCCTCAATCGTCATaGCATAGAGCGGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLSPQSS*HRAGAA
Trigger: GGCAGCTCCCGCTCTATGGCATGACGATTGAGGAGA...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATATTGTGTTGCCGCGGTaGGGGGCCTGGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYIVLPR*GAWRSS
Trigger: GCTGGAGCGCCAGGCCCCGCACCGCGGCAACACAAT...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGCGTGCACCATTGTGTTaGCGCGGTGCGGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRRAPLC*RGAGPG
Trigger: GCCAGGCCCCGCACCGCGGCAACACAATGGTGCACG...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGGTGCCAGCACACGTaGACCATTGTGTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVRCQHT*TIVLPR
Trigger: CCGCGGCAACACAATGGTGCACGTGTGCTGGCACCG...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCACAGAGCTGGTGGCACTaGGGATCACTTCCATCCACC +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAAQSWWH*GSLPST
Trigger: GGTGGATGGAAGTGATCCGCAGTGCCACCAGCTCTG...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGAAACCGTGTTCCCTGTaGAGTCCGACTGACACTACC +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVKPCSL*SPTDTT
Trigger: GGTAGTGTCAGTCGGACTGCACAGGGAACACGGTTT...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGGGGCAGGTGCTATGGTaGGGGGCGCTGGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLGQVLW*GALERM
Trigger: CATTCTTTCCAGCGCCCCGCACCATAGCACCTGCCC...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGCGTCCGTTTGCAAGTTaGTGTTTGTTTCCAGCTACA +
Preference number: 4 (lower is better)
Translates to: PPADARTGGGSAVHSDAERPFAS*CLFPAT
Trigger: TGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTACTGGAGCACATGGGATaGGCCTGGCTTGTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLLEHMG*AWLVLS
Trigger: ACTTAGGACAAGCCAGGCGCATCCCATGTGCTCCAG...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATGCAGCTGCGCTGGCTTaGCCCCACTTCCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHAAALA*PHFPRP
Trigger: TGGCCGTGGGAAGTGGGGGCAAGCCAGCGCAGCTGC...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCTGCAGGGGTGCCAGCTaGCCCGCCATGCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGCRGAS*PAMPLA
Trigger: TGCCAGAGGCATGGCGGGGCAGCTGGCACCCCTGCA...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCTCAGCTCTCGCACTGTaGGTGAGATCGGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEASALAL*VRSGEA
Trigger: TGCCTCACCCGATCTCACGCACAGTGCGAGAGCTGA...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGTCTTGGAGTTGTGTGTaGTCAGGCGGAAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: PPADARTGGGSAVHSDAESWSCV*SGGKNF
Trigger: GAAATTCTTTCCGCCTGACCACACACAACTCCAAGA...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAACGCACTATTGGCATCTaGCCGGAGCTTGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKERTIGI*PELDEK
Trigger: TTTCTCATCAAGCTCCGGCCAGATGCCAATAGTGCG...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGAATTCCAAGGTATCCTaGTACGCACTATTGGCATCT +
Preference number: 4 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTNSKVS*YALLAS
Trigger: AGATGCCAATAGTGCGTACCAGGATACCTTGGAATT...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATGTCCGGGGGCAGGCCTaGTCATTCAGCAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYVRGQA*SFSSGL
Trigger: CAGCCCGCTGCTGAATGACCAGGCCTGCCCCCGGAC...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGGCGTGGCTCGGCGGGTaGTGTTTGCACAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRAWLGG*CLHSRS
Trigger: GGAGCGGCTGTGCAAACACCACCCGCCGAGCCACGC...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGGTCGCGAGGCAGAGCTaGTGGCACTGCGGATCACTT +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLVARQS*WHCGSL
Trigger: AAGTGATCCGCAGTGCCACCAGCTCTGCCTCGCGAC...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTACGTGAAACCCCGCAGTaGAACGCTGTGTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLRETPQ*NAVCCK
Trigger: TTTGCAGCACACAGCGTTCCACTGCGGGGTTTCACG...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTAGAAGTCCCCAGGCCTaGAGCTGCCGAGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIRSPQA*SCRVPR
Trigger: CCTGGGCACTCGGCAGCTCCAGGCCTGGGGACTTCT...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCTGGGAGACAATGGGGTaGCCAGGGGGCTGTGACCAG +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACWETMG*PGGCDQ
Trigger: CTGGTCACAGCCCCCTGGCCACCCCATTGTCTCCCA...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACAGCCCCGCCATGCCTCTaGCACACACCGACTGCACAG +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTAPPCL*HTPTAQ
Trigger: CTGTGCAGTCGGTGTGTGCCAGAGGCATGGCGGGGC...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCCAGGGTAGATGCTGCTaGCTTTTCCTGACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFQGRCC*LFLTEL
Trigger: GAGCTCAGTCAGGAAAAGCCAGCAGCATCTACCCTG...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCTGCAATTGCTGCACCTaGCCCCAGCAGCACACTCCA +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEACNCCT*PQQHTP
Trigger: TGGAGTGTGCTGCTGGGGCCAGGTGCAGCAATTGCA...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp GCTATGGTGCGGGGCGCTGGAAAGAATGGGGTTGAATaGGCCCTCGCCTCCGCTTGTTTGAGACTCTCGTTA +
Preference number: 4 (lower is better)
Translates to: AMVRGAGKNGVE*ALASACLRLSL
Trigger: TAACGAGAGTCTCAAACAAGCGGAGGCGAGGGCCAATTCAACCCCATTCTTTCCAGCGCCCCGCACCATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CAA 72 bp CACATTTTACGTGCTCACTGGGCATCGTGGCTGGGGTaGACCCTATTTACCCTCGGGCGGGTCTGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: HILRAHWASWLG*TLFTLGRVCSY
Trigger: GTAGCTACAGACCCGCCCGAGGGTAAATAGGGTCAACCCCAGCCACGATGCCCAGTGAGCACGTAAAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 72 bp CACTCCAACACCGGGCGCCGAGAAGATGCTGAAGGCTaGGTTTCGAGGCTACCATGCTGTGATGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: HSNTGRREDAEG*VSRLPCCDVCV
Trigger: GACACAGACATCACAGCATGGTAGCCTCGAAACCAAGCCTTCAGCATCTTCTCGGCGCCCGGTGTTGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp TCTTGGCCGGTCTGGGGAAGCTGGGTTTGCAGCATCTaGATCAGCTCTTCGGCAGAGCTGCTGAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SWPVWGSWVCSI*ISSSAELLKGS
Trigger: ACTGCCTTTCAGCAGCTCTGCCGAAGAGCTGATCAAGATGCTGCAAACCCAGCTTCCCCAGACCGGCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTGATCCAGCCACACCGTaGTCTTTTTGTGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGADPATP*SFCDQE
Trigger: TTCCTGATCACAAAAAGATCACGGTGTGGCTGGATC...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTCGAACAGGTACCTTGTaGGTTCTTCTTGGAGTTGTG +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGARTGTL*VLLGVV
Trigger: CACAACTCCAAGAAGAACTCACAAGGTACCTGTTCG...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGCACGTCAACCTGCCTTaGGCCAAGTCCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLHVNLP*AKSCFT
Trigger: GGTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTG...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTTCGAGAACCTGCTTCTaGGTCCGACCACTGAACCGA +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVSRTCF*VRPLNR
Trigger: TCGGTTCAGTGGTCGGACTCAGAAGCAGGTTCTCGA...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTCAGTTCTGTAGGCTGTaGAGCAAGGCTCCGGATAGA +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCAQFCRL*SKAPDR
Trigger: TCTATCCGGAGCCTTGCTTCACAGCCTACAGAACTG...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGAGGCTGGTGCTCTGCTaGGACTGCTCCAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWRLVLC*DCSSTS
Trigger: GGAAGTGCTGGAGCAGTCTCAGCAGAGCACCAGCCT...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTCTTGGCTGCGGGGGCTaGGGTTTACTCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMILGCGG*GLLCWV
Trigger: GACCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAG...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGTCTGATTTGGGCATTTaGGCGGCCTTCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLSDLGI*AAFPQG
Trigger: GCCCTGTGGGAAGGCCGCTCAAATGCCCAAATCAGA...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGACTCAGAGGGGATGGTaGGCGAGTAGCCGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVTQRGW*ASSRAE
Trigger: CTCTGCTCGGCTACTCGCTCACCATCCCCTCTGAGT...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTACTCGCTTTCCGCCCTaGAGTAGTAGACGTGGGACT +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVTRFPP*SSRRGT
Trigger: AGTCCCACGTCTACTACTTCAGGGCGGAAAGCGAGT...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTGAGCCGCCTCTCCTCTaGAGCATTTTCAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAEPPLL*SIFRAF
Trigger: AAAGGCTCTGAAAATGCTTCAGAGGAGAGGCGGCTC...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTGGCTGCCCAGACGGATaGACTCCTTTACTAATAACA +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGAGCPDG*TPLLIT
Trigger: TGTTATTAGTAAAGGAGTTCATCCGTCTGGGCAGCC...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTCTGCAGGCTCCTAAGTaGCCCTTCTATCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVLQAPK*PFYHFP
Trigger: TGGGAAATGATAGAAGGGTCACTTAGGAGCCTGCAG...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCGGGTTTGCAGCATCTTaGTCAGCTCTTCGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAGFAAS*SALRQS
Trigger: GCTCTGCCGAAGAGCTGATCAAGATGCTGCAAACCC...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAATTGTGGAACTTCAAATaGCTCCTGGGTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKELWNFK*LLGVIQ
Trigger: CTGGATGACACCCAGGAGGCATTTGAAGTTCCACAA...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGCACAGGGCAAGTCGTTaGTCAATTTCCTTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: PPADARTGGGSAVHSDAEHRASR*SISLRK
Trigger: TTTTCTCAAGGAAATTGAGCAACGACTTGCCCTGTG...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTAGGCGCTCCAGCGATGTaGGCGAGGCGCTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLGAPAM*ARRSGH
Trigger: ATGACCTGAGCGCCTCGCGCACATCGCTGGAGCGCC...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTAGGAATAACGACAGGTaGCGGGGACTACGTACCATG +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQARNNDR*RGLRTM
Trigger: CATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGTGGCTGGTAGCTCCTaGGTTTTTGAGCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCAVAGSS*VFELCP
Trigger: AGGACACAGCTCAAAAACGCAGGAGCTACCAGCCAC...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGTGCCTCAGCGTCAACTaGTGCTGGTCTGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLCLSVN*CWSVAR
Trigger: CCTGGCTACAGACCAGCAGCAGTTGACGCTGAGGCA...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTATTGGAATCGTGCCACTaGTGGTCTGCGCCAGATGTA +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLLESCH*WSAPDV
Trigger: TACATCTGGCGCAGACCAGCAGTGGCACGATTCCAA...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGTCTGTGATGAGGAGTaGCCTCTTTCCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCAVCDEE*PLSSSV
Trigger: GACAGAGGAGGAAAGAGGGCACTCCTCATCACAGAC...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCAGAAGTGACCCTGGCTaGCCAGTACAAACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEARSDPG*PVQTAG
Trigger: CCCAGCTGTTTGTACTGGGCAGCCAGGGTCACTTCT...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATCCACACACGCACACCTaGCCGGTAGTCCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHPHTHT*PVVLAP
Trigger: GGGAGCGAGGACTACCGGGCAGGTGTGCGTGTGTGG...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCACTTCAAATGCCTCCTaGGTGTCATCCAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFTSNAS*VSSSIW
Trigger: CCAGATGCTGGATGACACCCAGGAGGCATTTGAAGT...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTTCCACGAGGTTGAGGTaGTTGCAAACTGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQASTRLR*LQTASS
Trigger: GCTGGATGCAGTTTGCAACCACCTCAACCTCGTGGA...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGTGCAGAAATCCCGACTaGCCATCAGGAATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVCRNPD*PSGIPR
Trigger: CCTTGGAATTCCTGATGGCCAGTCGGGATTTCTGCA...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCCTCCTCTTCCTCCGTaGGCGCCGAGGCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIPPLPP*APRRLR
Trigger: ACGGAGCCGCCTCGGCGCCCACGGAGGAAGAGGAGG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTATTGATCATCGTACCGTaGAGCTGTGCCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLLIIVP*SCATIS
Trigger: GGAGATGGTGGCACAGCTCCACGGTACGATGATCAA...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGATGGACTGCCGCTaGCCCCGGAGGGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRMMDCR*PRRVRQ
Trigger: CTGCCTGACCCTCCGGGGCCAGCGGCAGTCCATCAT...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTTGCCAGGACTGGAGGTaGGAGCGCTGTTCATTCAGA +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVCQDWR*ERCSFR
Trigger: TCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCA...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTAGAATGGGGTTGAATTaGCCCTCGCCTCCGCTTGTT +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCARMGLN*PSPPLV
Trigger: AACAAGCGGAGGCGAGGGCCAATTCAACCCCATTCT...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTAGAATGGGGTTGAATTaGCCCTCGCCTCCGCTTGTT +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQARMGLN*PSPPLV
Trigger: AACAAGCGGAGGCGAGGGCCAATTCAACCCCATTCT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGTTCCTGGTTCTCAGGTaGGCAGGTGCTATGGTGCGG +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLFLVLR*AGAMVR
Trigger: CCGCACCATAGCACCTGCCCACCTGAGAACCAGGAA...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTCCCAGGTCAGCGCCCTaGACTGCTTGCGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIPRSAP*TACALA
Trigger: AGCAAGTGCGCAAGCAGTCCAGGGCGCTGACCTGGG...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTAAACCACGGTGGCCATaGCTTAGACTTCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCAKPRWP*LRLPAS
Trigger: ACTGGCAGGAAGTCTAAGCCATGGCCACCGTGGTTT...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAACGGGAGCAGCTGCGCTaGCTTGCCCCCACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQREQLR*LAPTSH
Trigger: GTGGGAAGTGGGGGCAAGCCAGCGCAGCTGCTCCCG...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTTTTGAGCTGCATCTGTaGAGAAGAGGCCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVFELHL*RRGPFS
Trigger: AGAGAAGGGGCCTCTTCTCCACAGATGCAGCTCAAA...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTaGGAGGTTGCTGATCTGTGCGATTGCTGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: GLLAHLLTEMMQ*EVADLCDCCSG
Trigger: ACCGCTACAGCAATCGCACAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGGGACACGAGTTTTCCTaGAGGTGTTGGGGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVGHEFS*RCWGRL
Trigger: AAGCCGCCCCCAACACCTTCAGGAAAACTCGTGTCC...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCACCAGCATCTGGATTTTaGTGGACACGAGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPPASGF*WTRVFL
Trigger: CAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGG...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGGAAAGCGCTTCCTCTTaGAGCTCAGCTTCCGCACCT +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLESASS*SSASAP
Trigger: AGGTGCGGAAGCTGAGCTTCAAGAGGAAGCGCTTTC...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCAGGCTGGTGCTCTGCTaGGACTGCTCCAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASRLVLC*DCSSTS
Trigger: GGAAGTGCTGGAGCAGTCTCAGCAGAGCACCAGCCT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGCTTGGCTGCGGGGGCTaGGGTTTACTCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRLGCGG*GLLCWV
Trigger: GACCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAG...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCCTTGGCTGCGGGGGCTaGGGTTTACTCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFLGCGG*GLLCWV
Trigger: GACCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAG...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGTCTGATTTGGGCATTTaGGCGGCCTTCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVSDLGI*AAFPQG
Trigger: GCCCTGTGGGAAGGCCGCTCAAATGCCCAAATCAGA...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTAACTGGCGGCCACGATaGTGGACTGCCGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGINWRPR*WTAAGP
Trigger: GGGGCCAGCGGCAGTCCATCATCGTGGCCGCCAGTT...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAAACTGGCGGCCACGATaGTGGACTGCCGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPNWRPR*WTAAGP
Trigger: GGGGCCAGCGGCAGTCCATCATCGTGGCCGCCAGTT...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAAGGCTGGCAAGGGGATaGTTGTCCTGGTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAARLARG*LSWCDL
Trigger: CAAATCACACCAGGACAATCATCCCCTTGCCAGCCT...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTTGCCCTGTCTTGTGTTaGACGGATGTGTGTGTACTG +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCACPVLC*TDVCVL
Trigger: CAGTACACACACATCCGTTCAACACAAGACAGGGCA...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGTGGAAAGAATGGGGTTaGATTGGCCCTCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWWKEWG*IGPRLR
Trigger: GCGGAGGCGAGGGCCAATTCAACCCCATTCTTTCCA...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTGATATCATTTGTCAATaGGACGAGCCGATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVDIICQ*DEPILL
Trigger: GAGGAGGATCGGCTCGTCTCATTGACAAATGATATC...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCCTGGTACAAAGCCAGTaGGGGAAAAACTCTATGAGC +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFLVQSQ*GKNSMS
Trigger: GCTCATAGAGTTTTTCCCTCACTGGCTTTGTACCAG...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACATTCCCCATGATTTCATaGCCCCTCCCGCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTFPMIS*PLPPPC
Trigger: GCAGGGTGGCGGGAGGGGTCATGAAATCATGGGGAA...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTTTGAGCCAGGGTGTGTaGCAACAGTCTGTACAAACT +
Preference number: 4 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVLSQGV*QQSVQT
Trigger: AGTTTGTACAGACTGTTGTCACACACCCTGGCTCAA...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAGCGGCTCCGTCCGCCTaGTTGTTACCCGCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPAAPSA*LLPAGL
Trigger: AAGCCCCGCGGGTAACAAGCAGGCGGACGGAGCCGC...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCACCGCCAGGTGCTTCATaGCCTGAATGTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAAPPGAS*PECSSA
Trigger: TGCTGAAGAACATTCAGGGCATGAAGCACCTGGCGG...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CCCTGTGTCACTCTGAACACTGGGGCTTTAGAAACCCTTGCTGGAGTGTCCCCTACCACCCACAGCTTCTaGCACCCGTTGCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PCVTLNTGALETLAGVSPTTHSF*HPLLFL
Trigger: CAAAAACAGCAACGGGTGGCAGAAGCTGTGGGTGGT...AGGGGACACTCCAGCAAGGGTTTCTAAAGCCCCAGTGTTCAGAGTGACACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGCAGGAAAGCAGCCACTaGGGAAACGAGTGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQQESSH*GNECVR
Trigger: CCGGACACACTCGTTTCCGCAGTGGCTGCTTTCCTG...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATGTCAGCGCCCTGGACTaGTTGCGCACTTGCTCACCG +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYVSALD*LRTCSP
Trigger: CGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGCTGAC...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTCATCTTTGGGTGCATTaGCTTCTGTTGTCATACCAG +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGAHLWVH*LLLSYQ
Trigger: CTGGTATGACAACAGAAGGCAATGCACCCAAAGATG...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCTCCGTGGCTAATGTGTaGTTTTGGGAGGACCTTATG +
Preference number: 4 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSSVANV*FWEDLM
Trigger: CATAAGGTCCTCCCAAAAGCACACATTAGCCACGGA...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACATGGACTCAGTCCCACTaGTGGTGGAGCCCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTWTQSH*WWSPRS
Trigger: TGACCGAGGGCTCCACCAGCAGTGGGACTGAGTCCA...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTCCCAGGAGCTCTTTGTaGAACTTCAAATGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCAPRSSL*NFKCLL
Trigger: CAGGAGGCATTTGAAGTTCCACAAAGAGCTCCTGGG...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGAACAACAACGTGCTTTaGCCTTCTAATCTGTTTCAC +
Preference number: 4 (lower is better)
Translates to: PPADARTGGGSAVHSDAENNNVL*PSNLFH
Trigger: GTGAAACAGATTAGAAGGCCAAAGCACGTTGTTGTT...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAGCAATCTCTAGGAGCTaGAAATCTGATTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEAISRS*KSDSAG
Trigger: ACCAGCAGAATCAGATTTCCAGCTCCTAGAGATTGC...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTGCAGCTCTGGCCCCCTaGAGATTCGGCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGAALAP*RFGTFS
Trigger: GGAGAAGGTGCCGAATCTCCAGGGGGCCAGAGCTGC...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATTTCCTCCTCTTCCTCCGTaGGCGCCGAGGCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: CVVCLKLHSDGLLPTLVFPPLPP*APRRLR
Trigger: ACGGAGCCGCCTCGGCGCCCACGGAGGAAGAGGAGG...AAATACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTTGAGACACACTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCCTCCTCTTCCTCCGTaGGCGCCGAGGCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFPPLPP*APRRLR
Trigger: ACGGAGCCGCCTCGGCGCCCACGGAGGAAGAGGAGG...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGTGTCGGGGCTCAGGTTaGGAGACAAGGTCACGTTGG +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQCRGSG*ETRSRW
Trigger: CCAACGTGACCTTGTCTCCCAACCTGAGCCCCGACA...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTGAGAGGGTGCGTTCCTaGTTCTCAGGTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIERVRS*FSGGQV
Trigger: CACCTGCCCACCTGAGAACCAGGAACGCACCCTCTC...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGGAGCATAGGGAACAGTaGGGGGCAGGCCCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQREHREQ*GAGPPC
Trigger: ACAGGGAGGGCCTGCCCCCCACTGTTCCCTATGCTC...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATGGGCCGTGGACTGGGTaGCTGGTAGCTCCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYGPWTG*LVAPAF
Trigger: AAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCC...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTGCCCTGAGCTGCTCCTaGCTCAGCTGCCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TGNRLVHLVRQMINTRQAALSCS*LSCPEP
Trigger: AGGCTCTGGGCAGCTGAGCCAGGAGCAGCTCAGGGC...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGCTGTGGGACCTTGCTTaGCGAGGGGGAAAATCTCTG +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLLWDLA*RGGKSL
Trigger: CAGAGATTTTCCCCCTCGCCAAGCAAGGTCCCACAG...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTTGGGGGAAGCCAAGTTaGTGCTCTCTTTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAWGKPS*CSLSFV
Trigger: GACAAAGGAAAGAGAGCACCAACTTGGCTTCCCCCA...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGCACATGGGATGCGCCTaGCTTGTCCTAAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLHMGCA*LVLSVE
Trigger: CTCCACACTTAGGACAAGCCAGGCGCATCCCATGTG...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAACCGCATGTATGGCCTTaGCGAGGTGGGGGACCAGCG +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQPHVWP*RGGGPA
Trigger: CGCTGGTCCCCCACCTCGCCAAGGCCATACATGCGG...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCGGGGTAAATGCTACCTaGCTAAGGATGAGTGGATCT +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFGVNAT*LRMSGS
Trigger: AGATCCACTCATCCTTAGCCAGGTAGCATTTACCCC...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACTCGGGCTGAAGACTTaGCTCCTGGCCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTLGLKT*LLASSL
Trigger: GAGTGAGGAGGCCAGGAGCCAAGTCTTCAGCCCGAG...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCATGAGATCTGCAGGCTaGGTAAAGACCTGGGGGACT +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAMRSAG*VKTWGT
Trigger: AGTCCCCCAGGTCTTTACCCAGCCTGCAGATCTCAT...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp GGACACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTaGCTGGGTTCTGATTTTCTTGGAAGTGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: GHQCGLGCTGHF*LGSDFLGSASA
Trigger: GGCAGATGCACTTCCAAGAAAATCAGAACCCAGCAAGAAGTGGCCAGTGCACCCCAAACCACACTGGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 72 bp GTGAGCCAAAGCCAGGCCTTTCTTCCCGCTTTGGGATaGGGCACAAGCTGCCTGTTAACCATGTACCGGTAT +
Preference number: 4 (lower is better)
Translates to: VSQSQAFLPALG*GTSCLLTMYRY
Trigger: ATACCGGTACATGGTTAACAGGCAGCTTGTGCCCAATCCCAAAGCGGGAAGAAAGGCCTGGCTTTGGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GTGGATGGGCCCCTCTGTATGCAGCTTCACGTATCTGAGATCACATCTGTATCTGGACACGAGTTTTCCTaGAGGTGTTGGGGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: VDGPLCMQLHVSEITSVSGHEFS*RCWGRL
Trigger: AAGCCGCCCCCAACACCTTCAGGAAAACTCGTGTCC...AGATACAGATGTGATCTCAGATACGTGAAGCTGCATACAGAGGGGCCCATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTACCGTGATCTTTTTGTaGTCAGGAAACTCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQATVIFL*SGNSRP
Trigger: TGGCCTCGAGTTTCCTGATCACAAAAAGATCACGGT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGTCGAGAACCTGCTTCTaGGTCCGACCACTGAACCGA +
Preference number: 4 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWSRTCF*VRPLNR
Trigger: TCGGTTCAGTGGTCGGACTCAGAAGCAGGTTCTCGA...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTAGGCTCCGGATAGAATaGATCTTGCTGTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQARLRIE*ILLCFL
Trigger: AAGGAAGCACAGCAAGATTCATTCTATCCGGAGCCT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGTTGCTCACTGTGCTCTaGAACCACGAAGTGATAACT +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVLLTVL*NHEVIT
Trigger: AGTTATCACTTCGTGGTTTCAGAGCACAGTGAGCAA...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTAGGTGCTTCATGCCCTaGATGTTCTTCAGCATGACA +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQARCFMP*MFFSMT
Trigger: TGTCATGCTGAAGAACATTCAGGGCATGAAGCACCT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGGCAGGAGGAAGGTGTTaGGCGGTAGGTAACACACCT +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQAGGRC*AVGNTP
Trigger: AGGTGTGTTACCTACCGCTCAACACCTTCCTCCTGC...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATACTCAGAGGGGATGGTaGGCGAGTAGCCGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYTQRGW*ASSRAE
Trigger: CTCTGCTCGGCTACTCGCTCACCATCCCCTCTGAGT...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGACAAGAGACTCTTTGTaGCTCAACACGTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLTRDSL*LNTWGR
Trigger: GCGACCCCACGTGTTGAGTCACAAAGAGTCTCTTGT...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTTGCCCTGTCTTGTGTTaGACGGATGTGTGTGTACTG +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVCPVLC*TDVCVL
Trigger: CAGTACACACACATCCGTTCAACACAAGACAGGGCA...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGAATGGTGCTGATCAATaGCACACGGGTTTTCATGCT +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVNGADQ*HTGFHA
Trigger: AGCATGAAAACCCGTGTGTCATTGATCAGCACCATT...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTTGGAAAGAATGGGGTTaGATTGGCCCTCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIWKEWG*IGPRLR
Trigger: GCGGAGGCGAGGGCCAATTCAACCCCATTCTTTCCA...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAATGCTGGATTGTGGCGTaGGGTATTTTTATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKECWIVA*GIFIPF
Trigger: AAAGGGAATAAAAATACCTCACGCCACAATCCAGCA...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGGTCTCCAGGAATGAGTaGGTGGTGACTTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWVSRNE*VVTSGG
Trigger: CCCTCCAGAAGTCACCACTCACTCATTCCTGGAGAC...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTTCAGAAATAAATAGCTaGGGAGACTGCCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQASEINS*GDCLVP
Trigger: GGGGACAAGGCAGTCTCCTCAGCTATTTATTTCTGA...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAAAGGAAGTTAGTGGGTaGGCTTGGGGATGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAAKEVSG*AWGCSS
Trigger: TGAGCTACATCCCCAAGCTCACCCACTAACTTCCTT...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCGTATTTCTTGATAGTTaGGTCTTAGGCTCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSVFLDS*VLGSVA
Trigger: AGCCACGGAGCCTAAGACTCAACTATCAAGAAATAC...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCGAGTGGATCTGTCTCTaGCTTATTACATCTACCAGG +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFEWICL*LITSTR
Trigger: CCTGGTAGATGTAATAAGTCAGAGACAGATCCACTC...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCTCAATGGCATACAGATaGCTGTTCAAGGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFSMAYR*LFKELK
Trigger: CTTCAGCTCCTTGAACAGTCATCTGTATGCCATTGA...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACAGCGCCGAGAAGATGCTaGAGGCTTGGTTTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTAPRRC*RLGFEA
Trigger: AGCCTCGAAACCAAGCCTTCAGCATCTTCTCGGCGC...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCGTCTGTCACCTGCTTTaGAGGCACAGCCCCGGGCAA +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGVCHLL*RHSPGQ
Trigger: TTGCCCGGGGCTGTGCCTTCAAAGCAGGTGACAGAC...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTATTGTGGAACTTCAAATaGCTCCTGGGTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLLWNFK*LLGVIQ
Trigger: CTGGATGACACCCAGGAGGCATTTGAAGTTCCACAA...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCGAGGTGGTTGCAAACTaGATCCAGCAGCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACEVVAN*IQQHLP
Trigger: GGGAAGGTGCTGCTGGATGCAGTTTGCAACCACCTC...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCCATTACACGTCAACCTaGCTTGAGCCAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAHYTST*LEPSPA
Trigger: AGCAGGACTTGGCTCAAGGCAGGTTGACGTGTAATG...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTTTTTCCAGAAGGACTTaGAGAAATCCCGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAFSRRT*RNPDWP
Trigger: TGGCCAGTCGGGATTTCTGCAAGTCCTTCTGGAAAA...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCACAGTCAGGGAGCCTGTaGTTGGCTGCGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPQSGSL*LAAGAE
Trigger: CTCAGCCCCCGCAGCCAAGCACAGGCTCCCTGACTG...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGCGGAAAGGTGAGGACTaGCAGTCAGGGAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRRKGED*QSGSLC
Trigger: GCACAGGCTCCCTGACTGGCAGTCCTCACCTTTCCG...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGGCAGCTCAAAGTCTCTaGAGAAGTTCTCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQAAQSL*RSSPAA
Trigger: GGCGGCTGGAGAACTTCTGCAGAGACTTTGAGCTGC...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGGCAGCTCAAAGTCTCTaGAGAAGTTCTCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVAAQSL*RSSPAA
Trigger: GGCGGCTGGAGAACTTCTGCAGAGACTTTGAGCTGC...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTCGTACCGTGGAGCTGTaGCACCATCTCCGTGATCTC +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIRTVEL*HHLRDL
Trigger: GAGATCACGGAGATGGTGGCACAGCTCCACGGTACG...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGACTCCACCGAAGAGGTaGGCCACTGGGAGCCACCCC +
Preference number: 4 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRTPPKR*ATGSHP
Trigger: GGGGTGGCTCCCAGTGGCGCACCTCTTCGGTGGAGT...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTCCAAAATGGGTTTCCTaGCCTCACATCGGGAATGCA +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVPKWVS*PHIGNA
Trigger: TGCATTCCCGATGTGAGGGCAGGAAACCCATTTTGG...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTGGGAAGCCAAGTTGGTaGTCTCTTTCCTTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAGKPSW*SLSFVC
Trigger: ACAGACAAAGGAAAGAGAGCACCAACTTGGCTTCCC...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCGGGTGGCAGGGTAGATaGTGCTGGCTTTTCCTGACT +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACGWQGR*CWLFLT
Trigger: AGTCAGGAAAAGCCAGCAGCATCTACCCTGCCACCC...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCTCAATCACTGTCCGATaGATTTTACTCCACACACGC +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFSITVR*ILLHTR
Trigger: GCGTGTGTGGAGTAAAATGCATCGGACAGTGATTGA...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCTGGGGAAGCTGGGTTTaGAGCATCTTGATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAWGSWV*SILISS
Trigger: AGAGCTGATCAAGATGCTGCAAACCCAGCTTCCCCA...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAACTTCAAATGCCTCCTaGGTGTCATCCAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAATSNAS*VSSSIW
Trigger: CCAGATGCTGGATGACACCCAGGAGGCATTTGAAGT...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ATCAAACCAAGCCTCCTGGAGACCCGTTTAGGAGTGGATGGGCCCCTCTGTATGACTTCAAATGCCTCCTaGGTGTCATCCAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: IKPSLLETRLGVDGPLCMTSNAS*VSSSIW
Trigger: CCAGATGCTGGATGACACCCAGGAGGCATTTGAAGT...CATACAGAGGGGCCCATCCACTCCTAAACGGGTCTCCAGGAGGCTTGGTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR CCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTCGCACTATTGGCATCTaGCCGGAGCTTGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVRTIGI*PELDEK
Trigger: TTTCTCATCAAGCTCCGGCCAGATGCCAATAGTGCG...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCTGCAGAAATCCCGACTaGCCATCAGGAATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEACRNPD*PSGIPR
Trigger: CCTTGGAATTCCTGATGGCCAGTCGGGATTTCTGCA...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTAGCAGCTCTGGCCCCCTaGAGATTCGGCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KMGFLPSHRECICIPGILAALAP*RFGTFS
Trigger: GGAGAAGGTGCCGAATCTCCAGGGGGCCAGAGCTGC...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGTCAGTGCTTCCGGCATaGCGTCCTCTTTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVSVLPA*RPLCSL
Trigger: CAGTGAGCAAAGAGGACGCCATGCCGGAAGCACTGA...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGAGCGGATGCCAGGACTaGAGGTGGGAGCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRSGCQD*RWERCS
Trigger: TGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCT...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTAGGGGCCAAAGCCACTaGAAACCGTGTTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIRGQSH*KPCSLC
Trigger: GCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCT...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CCCTGTGTCACTCTGAACACTGGGGCTTTAGAAACCCTTGCTGGAGTGTCCCCTCTTAGCCAAGGAAGCTaGCTTTTGTGTCGCCACTTC +
Preference number: 4 (lower is better)
Translates to: PCVTLNTGALETLAGVSPLSQGS*LLCRHF
Trigger: GAAGTGGCGACACAAAAGCCAGCTTCCTTGGCTAAG...AGGGGACACTCCAGCAAGGGTTTCTAAAGCCCCAGTGTTCAGAGTGACACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCCTACAGATGCTTGAGTaGGTTATTGTGTCGGTTTGC +
Preference number: 4 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSLQMLE*VIVSVC
Trigger: GCAAACCGACACAATAACCCACTCAAGCATCTGTAG...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGGAGGGGGAAAATCTCTaGGTTTCTGGAGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQEGENL*VSGVGG
Trigger: CCCTCCCACTCCAGAAACCCAGAGATTTTCCCCCTC...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCAGTTATTTTGCTTCTCTaGAAGGGGCCTATGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPVILLL*KGPMLA
Trigger: AGCAAGCATAGGCCCCTTCCAGAGAAGCAAAATAAC...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGTTTGGTGACATGCTCTaGAGTTTTTGTGTAAGAATC +
Preference number: 4 (lower is better)
Translates to: PPADARTGGGSAVHSDAEFGDML*SFCVRI
Trigger: GATTCTTACACAAAAACTCCAGAGCATGTCACCAAA...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGACGTTGTTCCTGCTTTaGACCATATTTCGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVTLFLL*TIFRKQ
Trigger: CTGCTTCCGAAATATGGTCCAAAGCAGGAACAACGT...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTGAGCGTTCACCCCGATaGCTGCCAAAACCACGGTGG +
Preference number: 4 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLERSPR*LPKPRW
Trigger: CCACCGTGGTTTTGGCAGCCATCGGGGTGAACGCTC...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCTGCTGGACCTGTGCTTaGCTGCGGGGGCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGCWTCA*LRGLRF
Trigger: AAACCTCAGCCCCCGCAGCCAAGCACAGGTCCAGCA...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCTTCGCCCCTCCTCCCTaGACAGCAGATAGACACCGC +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFFAPPP*TADRHR
Trigger: GCGGTGTCTATCTGCTGTCCAGGGAGGAGGGGCGAA...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTGAGAGAGCTATGCCTTaGGAGTCGAGGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGERAMP*ESRAPA
Trigger: AGCGGGAGCCCTCGACTCCCAAGGCATAGCTCTCTC...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCAGTCCCACTGCTGGTaGAGCCCTCGGTCACTTGCA +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGQSHCW*SPRSLA
Trigger: TGCAAGTGACCGAGGGCTCCACCAGCAGTGGGACTG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCCTTGCCCACCTTTTCTaGAAAGCAAGCCACTTATGT +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFLAHLF*KASHLC
Trigger: ACATAAGTGGCTTGCTTTCCAGAAAAGGTGGGCAAG...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTAGCCCAGTGAGGCCCTaGTATGGTGGCACATCAGGG +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGSPVRP*YGGTSG
Trigger: CCCTGATGTGCCACCATACCAGGGCCTCACTGGGCT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCGGCTGGGTAAAGACCTaGGGGACTGGAGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGGWVKT*GTGVSP
Trigger: TGGGGAGACTCCAGTCCCCCAGGTCTTTACCCAGCC...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCCAGCCAGTGAGTGGCTaGTATCTGAAGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASQPVSG*YLKAWV
Trigger: GACCCAGGCCTTCAGATACCAGCCACTCACTGGCTG...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTGCTTTCAACTACTCATaGAGATCAGATATCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVAFNYS*RSDIPW
Trigger: CCACGGGATATCTGATCTCCATGAGTAGTTGAAAGC...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp ACACGGCAGGCTCTTCGTCCGTTTGCAAGTTGCTGTTaGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: TRQALRPFASCC*FPATPVRAPQR
Trigger: TCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACGAAGAGCCTGCCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CAA 72 bp TTGACTGGCAGCATTTCCTGTCGGGGGAGGTGGGGTTaGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTC +
Preference number: 4 (lower is better)
Translates to: LTGSISCRGRWG*MELESSPLCTF
Trigger: GAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCTCCCCCGACAGGAAATGCTGCCAGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 72 bp AGTGAGTGGCTGGTATCTGAAGGCCTGGGTCCCCTATaGAGTCAGGAGACCCCTACACTAGCTATTGTCCTA +
Preference number: 4 (lower is better)
Translates to: SEWLVSEGLGPL*SQETPTLAIVL
Trigger: TAGGACAATAGCTAGTGTAGGGGTCTCCTGACTCAATAGGGGACCCAGGCCTTCAGATACCAGCCACTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp TCATCAGTGAGCCAAAGCCAGGCCTTTCTTCCCGCTTaGGGATTGGGCACAAGCTGCCTGTTAACCATGTAC +
Preference number: 4 (lower is better)
Translates to: SSVSQSQAFLPA*GLGTSCLLTMY
Trigger: GTACATGGTTAACAGGCAGCTTGTGCCCAATCCCAAAGCGGGAAGAAAGGCCTGGCTTTGGCTCACTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTGGACACGAGTTTTCCTaGAGGTGTTGGGGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGGHEFS*RCWGRL
Trigger: AAGCCGCCCCCAACACCTTCAGGAAAACTCGTGTCC...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTAGATTGCACAATGTGTaGAATCAAGAGAGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQARLHNV*NQESCA
Trigger: AGCGCAGCTCTCTTGATTTCACACATTGTGCAATCT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTTTGCTCACTGTGCTCTaGAACCACGAAGTGATAACT +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCALLTVL*NHEVIT
Trigger: AGTTATCACTTCGTGGTTTCAGAGCACAGTGAGCAA...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGCAAAATTCGGGAATATaGGACTTTTCAGTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVQNSGI*DFSVLP
Trigger: CGGAAGCACTGAAAAGTCTCATATTCCCGAATTTTG...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGTCTGATTTGGGCATTTaGGCGGCCTTCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRSDLGI*AAFPQG
Trigger: GCCCTGTGGGAAGGCCGCTCAAATGCCCAAATCAGA...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTAGAATGTTCTTCAGCATaGCATCGCCGATTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLECSSA*HRRFFG
Trigger: ACCAAAGAATCGGCGATGTCATGCTGAAGAACATTC...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCACCTGCTTGTAGTGCATaGGCCGGTGCAGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPPACSA*AGAVAA
Trigger: TGCGGCCACTGCACCGGCTCATGCACTACAAGCAGG...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGCAATCAAATCTTTCTTaGGTTCGTGCAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVQSNLS*VRAASG
Trigger: TCCAGAAGCTGCACGAACTCAAGAAAGATTTGATTG...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAGCTCAGGTCATCCTCTaGCTCCTGGTCAGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPAQVIL*LLVSRG
Trigger: ACCGCGGCTGACCAGGAGTCAGAGGATGACCTGAGC...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGTCTCAGTGCCAGCCCTaGGCTGCTCCTGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRSQCQP*AAPGSA
Trigger: AGCTGAGCCAGGAGCAGCTCAGGGCTGGCACTGAGA...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAAGAAACCCTGGTCTCGTaGCCCCAGGTTGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQETLVS*PQVARA
Trigger: AGCCCGAGCAACCTGGGGTCACGAGACCAGGGTTTC...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACATGCAGGAATGCTGGGTaGAAGGCAGTGACACTGGTG +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTCRNAG*KAVTLV
Trigger: CACCAGTGTCACTGCCTTTCACCCAGCATTCCTGCA...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCGCACCAGGCCACTTTTaGTCTGTGATGTCTACAACT +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAAPGHF*SVMSTT
Trigger: AGTTGTAGACATCACAGATCAAAAGTGGCCTGGTGC...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCTGGGACCAAGTCAGGTaGGGCCTTTTCTACATTCCC +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACWDQVR*GLFYIP
Trigger: GGGAATGTAGAAAAGGCCTCACCTGACTTGGTCCCA...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCGGGGAGAGGAAACTGTaGCTGACATTCATTGCTACT +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAGERKL*LTFIAT
Trigger: AGTAGCAATGAATGTCAGTCACAGTTTCCTCTCCCC...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GTGGATGGGCCCCTCTGTATGCAGCTTCACGTATCTGAGATCACATCTGTATCTCCTGGGGTCGGCCTCTaGTCTATTTCTCCCATGATG +
Preference number: 4 (lower is better)
Translates to: VDGPLCMQLHVSEITSVSPGVGL*SISPMM
Trigger: CATCATGGGAGAAATAGAGCAGAGGCCGACCCCAGG...AGATACAGATGTGATCTCAGATACGTGAAGCTGCATACAGAGGGGCCCATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR GCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCCCTGGGGTCGGCCTCTaGTCTATTTCTCCCATGATG +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASPGVGL*SISPMM
Trigger: CATCATGGGAGAAATAGAGCAGAGGCCGACCCCAGG...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCTGCTTCCTTTCAAACTaGACCTTCTTATGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSCFLSN*TFLCPP
Trigger: AGGAGGACATAAGAAGGTGCAGTTTGAAAGGAAGCA...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTCGGAAAGGTGAGGACTaGCAGTCAGGGAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TGNRLVHLVRQMINTRQARKGED*QSGSLC
Trigger: GCACAGGCTCCCTGACTGGCAGTCCTCACCTTTCCG...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTTCTCCTCAATCGTCATaGCATAGAGCGGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMISPQSS*HRAGAA
Trigger: GGCAGCTCCCGCTCTATGGCATGACGATTGAGGAGA...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTACTCAGGGGCGGGGCTaGTGCTCTTCTCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLTQGRG*CSSPPG
Trigger: ACCTGGCGGAGAAGAGCAGCAGCCCCGCCCCTGAGT...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGACCACCCACAGCTTCTaGCACCCGTTGCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQTTHSF*HPLLFL
Trigger: CAAAAACAGCAACGGGTGGCAGAAGCTGTGGGTGGT...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTCAGTGGAACGCTGTGTaGTGCAAATTGCTTATTAAT +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGAQWNAV*CKLLIN
Trigger: ATTAATAAGCAATTTGCAGCACACAGCGTTCCACTG...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGAGGAATAACGACAGGTaGCGGGGACTACGTACCATG +
Preference number: 4 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWRNNDR*RGLRTM
Trigger: CATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCT...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTCCGGAGCTGTTTGTTTaGTCTGCCCCTGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TGNRLVHLVRQMINTRQAPELFV*SAPAWR
Trigger: CCTCCAGGCAGGGGCAGAGCAAACAAACAGCTCCGG...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTAAGAGGACAGGGCACCTaGTGTGTATGTGTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLRGQGT*CVCVAV
Trigger: CACGGCCACACATACACAGCAGGTGCCCTGTCCTCT...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp ATCAAACCAAGCCTCCTGGAGACCCGTTTAGGAGTGGATGGGCCCCTCTGTATGCATTGGAACTTCAAATaGCTCCTGGGTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: IKPSLLETRLGVDGPLCMHWNFK*LLGVIQ
Trigger: CTGGATGACACCCAGGAGGCATTTGAAGTTCCAATG...CATACAGAGGGGCCCATCCACTCCTAAACGGGTCTCCAGGAGGCTTGGTTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR GCA 90 bp ACCAAGCCTCCTGGAGACCCGTTTAGGAGTGGATGGGCCCCTCTGTATGCAGCTATTAGATGTGAATGGTaGTTGGGCTTCATGGAGCAT +
Preference number: 4 (lower is better)
Translates to: TKPPGDPFRSGWAPLYAAIRCEW*LGFMEH
Trigger: ATGCTCCATGAAGCCCAAGCACCATTCACATCTAAT...AGCTGCATACAGAGGGGCCCATCCACTCCTAAACGGGTCTCCAGGAGGCTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR GCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTGGGATGCTGGACCTGTaGTTGGCTGCGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFGMLDL*LAAGAE
Trigger: CTCAGCCCCCGCAGCCAAGCACAGGTCCAGCATCCC...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTCTTGTCATTAGGACTTaGTGTTTATCTTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVLVIRT*CLSCPP
Trigger: AGGTGGGCAAGATAAACAGCAAGTCCTAATGACAAG...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCAACAGGAGGGTGAGCTaGATAATTGAACATACACAG +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFNRRVS*IIEHTQ
Trigger: CTGTGTATGTTCAATTATGCAGCTCACCCTCCTGTT...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCTTCCACATGAAAGCTTaGACTTTGGGGAATAGGATC +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFFHMKA*TLGNRI
Trigger: GATCCTATTCCCCAAAGTGCAAGCTTTCATGTGGAA...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCCCCTCCCGCCACCCTaGCATTCATCTAGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGPLPPP*HSSRRG
Trigger: ACCTCTTCTAGATGAATGGCAGGGTGGCGGGAGGGG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTTGGGGGCAGGCTTGCTaGATTTCACTCACGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGWGQAC*ISLTEP
Trigger: AGGCTCCGTGAGTGAAATGCAGCAAGCCTGCCCCCA...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTAGCGAGCACCCTTGCTaGACTGCACCTGGGAACACA +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGSEHPC*TAPGNT
Trigger: TGTGTTCCCAGGTGCAGTGCAGCAAGGGTGCTCGCT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTAACAGCGAGCACCCTTaGTGCACTGCACCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGNSEHP*CTAPGN
Trigger: GTTCCCAGGTGCAGTGCAGCAAGGGTGCTCGCTGTT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTCCTCGCCGGCAGCTCTaGCCCCCTGGAGATTCGGCA +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVPRRQL*PPGDSA
Trigger: TGCCGAATCTCCAGGGGGCCAGAGCTGCCGGCGAGG...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCACAGGGAGCCTGTGCTTaGCTGCGGGGGCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPQGACA*LRGLRF
Trigger: AAACCTCAGCCCCCGCAGCCAAGCACAGGCTCCCTG...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTAGACAGGAGAGCTGCTaGGAAGCCATGTTTTTGATT +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQARQESC*EAMFLI
Trigger: AATCAAAAACATGGCTTCCCAGCAGCTCTCCTGTCT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAGGTGGGCAGGTGCTATaGTGCGGGGCGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPGGQVL*CGALER
Trigger: TCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACC...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGAGGTGGACACCAGTGTaGTTTGGGGTGCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLRWTPV*FGVHWP
Trigger: TGGCCAGTGCACCCCAAACCACACTGGTGTCCACCT...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGTTCTAATGAATACTaGTATGAACGGGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVGSNEY*YERGVS
Trigger: AGAGACTCCCCGTTCATACCAGTATTCATTAGAACC...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTGCATCACTATTTTTATaGCCAAAATGGGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QSELHREGAFLVLRWAGAASLFL*PKWVSC
Trigger: GCAGGAAACCCATTTTGGCCATAAAAATAGTGATGC...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CCCTGTGTCACTCTGAACACTGGGGCTTTAGAAACCCTTGCTGGAGTGTCCCCTTGGAGGGACCGTCTTTaGAGTTGGTGTGTGTTTTAC +
Preference number: 4 (lower is better)
Translates to: PCVTLNTGALETLAGVSPWRDRL*SWCVFY
Trigger: GTAAAACACACACCAACTCCAAAGACGGTCCCTCCA...AGGGGACACTCCAGCAAGGGTTTCTAAAGCCCCAGTGTTCAGAGTGACACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp ACCAAGCCTCCTGGAGACCCGTTTAGGAGTGGATGGGCCCCTCTGTATGCAGCTTCAATTAGATGTGAATaGTGCTTGGGCTTCATGGAG +
Preference number: 4 (lower is better)
Translates to: TKPPGDPFRSGWAPLYAASIRCE*CLGFME
Trigger: CTCCATGAAGCCCAAGCACCATTCACATCTAATTGA...AGCTGCATACAGAGGGGCCCATCCACTCCTAAACGGGTCTCCAGGAGGCTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTACTCAGTCCCACTGCTaGTGGAGCCCTCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGTQSHC*WSPRSL
Trigger: AAGTGACCGAGGGCTCCACCAGCAGTGGGACTGAGT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCGAGGCCCTGGTATGGTaGCACATCAGGGAGCTATCC +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGEALVW*HIRELS
Trigger: GGATAGCTCCCTGATGTGCCACCATACCAGGGCCTC...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAACCCTCTTGGCCGGTCTaGGGAAGCTGGGTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQPSWPV*GSWVCS
Trigger: GCTGCAAACCCAGCTTCCCCAGACCGGCCAAGAGGG...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACAATCATTCTTCCCTCTTaGCCGGTCTGGGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTIILPS*PVWGSW
Trigger: CCAGCTTCCCCAGACCGGCCAAGAGGGAAGAATGAT...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCTTGTCCACCGTAATCTaGCAACATCCGGGGCTTACC +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACLSTVI*QHPGLT
Trigger: GGTAAGCCCCGGATGTTGCCAGATTACGGTGGACAA...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGCCAGCATCTGGATTTTaGTGGACACGAGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLPASGF*WTRVFL
Trigger: CAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGG...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACACCTTCCACGAGGTTaGGGTGGTTGCAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTHLPRG*GGCKLH
Trigger: ATGCAGTTTGCAACCACCTCAACCTCGTGGAAGGTG...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGGATCCAGCCACACCGTaGTCTTTTTGTGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLDPATP*SFCDQE
Trigger: TTCCTGATCACAAAAAGATCACGGTGTGGCTGGATC...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCAGATTGCACAATGTGTaGAATCAAGAGAGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEARLHNV*NQESCA
Trigger: AGCGCAGCTCTCTTGATTTCACACATTGTGCAATCT...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTCCAATGTGGTTATGGTaGAATTCCACGATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAPMWLW*NSTILS
Trigger: GGACAAAATCGTGGAATTTCACCATAACCACATTGG...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTTGGCAACGGCCAGATTaGTCTTCGTGCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGWQRPD*SSCLPC
Trigger: ACAGGGAAGGCACGAAGATCAATCTGGCCGTTGCCA...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAAGGCTGGTGCTCTGCTaGGACTGCTCCAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPRLVLC*DCSSTS
Trigger: GGAAGTGCTGGAGCAGTCTCAGCAGAGCACCAGCCT...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTGCCGCCGGGAGCTCTTaGTTCCATTCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLAAGSS*FHSPGP
Trigger: AGGCCCTGGAGAATGGAATCAAGAGCTCCCGGCGGC...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTACCACTCACAGGACGGTaGCAGTCCAGGTATTGCACT +
Preference number: 4 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLPLTGR*QSRYCT
Trigger: AGTGCAATACCTGGACTGTCACCGTCCTGTGAGTGG...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTGGGTTTTCATGCTTGTaGCACAGACAGACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVGFSCL*HRQTAK
Trigger: TTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCC...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTTACCACAAATGGTGCTaGTCAATGACACACGGGTTT +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVYHKWC*SMTHGF
Trigger: AAACCCGTGTGTCATTGATCAGCACCATTTGTGGTA...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCTGTGCAGTCCGACTaGCACTACCCCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLPVQSD*HYPMPG
Trigger: CCCAGGCATGGGGTAGTGTCAGTCGGACTGCACAGG...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTATGCTGGATTGTGGCGTaGGGTATTTTTATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLCWIVA*GIFIPF
Trigger: AAAGGGAATAAAAATACCTCACGCCACAATCCAGCA...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAACACTAGTATTTTCTTaGGGGCACACAGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAATLVFS*GHTGSR
Trigger: TCTGCTTCCTGTGTGCCCTCAAGAAAATACTAGTGT...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCAGCATCTCAGAGTCTaGCTCACTGGACTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGQHLRV*LTGLSP
Trigger: GGGACTGAGTCCAGTGAGTCAGACTCTGAGATGCTG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAAGCCTGGGTCCCCTATTaGGTCAGGAGACCCCTACAC +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQAWVPY*VRRPLH
Trigger: GTGTAGGGGTCTCCTGACTCAATAGGGGACCCAGGC...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAACAGCACGATTTTCCATaGCCGCACTGGCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKQHDFP*PHWRRR
Trigger: CCGGCGCCGCCAGTGCGGTCATGGAAAATCGTGCTG...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTTTTTCCATGTTGCAGTaGTTTCTAACTACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVFSMLQ*FLTTPH
Trigger: GTGAGGAGTAGTTAGAAATCACTGCAACATGGAAAA...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCTTCACCTCTTCCCCATaGTTTCATGACCCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGFTSSP*FHDPSR
Trigger: GCGGGAGGGGTCATGAAATCATGGGGAAGAGGTGAA...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGGAGGTGGTTGCAAACTaGATCCAGCAGCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLEVVAN*IQQHLP
Trigger: GGGAAGGTGCTGCTGGATGCAGTTTGCAACCACCTC...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTAAGTCCTGCTTCACCTaGAGCGCGAACAGGTACCTT +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIKSCFT*SANRYL
Trigger: AAGGTACCTGTTCGCGCTGCAGGTGAAGCAGGACTT...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTTCCCCAATCTCAGATTaGACAATGTGTGAAATCAAG +
Preference number: 4 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVSPISD*TMCEIK
Trigger: CTTGATTTCACACATTGTGCAATCTGAGATTGGGGA...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTACTGTCCTTGGCCGGGTaGAACCGGATTCCATACATC +
Preference number: 4 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLLSLAG*NRIPYI
Trigger: GATGTATGGAATCCGGTTGCACCCGGCCAAGGACAG...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGTTTTCCAGAAGGACTTaGAGAAATCCCGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLFSRRT*RNPDWP
Trigger: TGGCCAGTCGGGATTTCTGCAAGTCCTTCTGGAAAA...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCGGTGCCAGCACACGTaGACCATTGTGTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLRCQHT*TIVLPR
Trigger: CCGCGGCAACACAATGGTGCACGTGTGCTGGCACCG...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTAGGAATAACGACAGGTaGCGGGGACTACGTACCATG +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIRNNDR*RGLRTM
Trigger: CATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCT...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGCAGTGTGGTTTGGGGTaGACTGGCCACTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLQCGLG*TGHFLL
Trigger: CAGCAAGAAGTGGCCAGTGCACCCCAAACCACACTG...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCTCAGCGTCAACTGCTaGTGGTCTGTAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGILSVNC*WSVARP
Trigger: GGGCCTGGCTACAGACCAGCAGCAGTTGACGCTGAG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTGCGCCCTGGACTGCTTaGGCACTTGCTCACCGAGAT +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIAPWTA*ALAHRD
Trigger: ATCTCGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGC...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGCTGGAGCACATGGGATaGGCCTGGCTTGTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRLEHMG*AWLVLS
Trigger: ACTTAGGACAAGCCAGGCGCATCCCATGTGCTCCAG...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAAGAATGGAAGTACTGCTaGCTCTGGCAGCCCGGGATG +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQEWKYC*LWQPGM
Trigger: CATCCCGGGCTGCCAGAGGCAGCAGTACTTCCATTC...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCGACTTGAACTGCTGCTaGTGGGAGACAATGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGDLNCC*WETMGW
Trigger: CCACCCCATTGTCTCCCAGCAGCAGCAGTTCAAGTC...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCGGCCTCCGGGGTAAATaGTACCTGGCTAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGGLRGK*YLAKDE
Trigger: CTCATCCTTAGCCAGGTAGCATTTACCCCGGAGGCC...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCAAAACAGTCCTTCTCTaGGCTGTACACAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFKTVLL*AVHNSK
Trigger: CTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTT...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATACATTCTGCAATTGCTaGACCTGGCCCCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHTFCNC*TWPQQH
Trigger: GTGCTGCTGGGGCCAGGTGCAGCAATTGCAGAATGT...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCACAGACTGGTCACCATaGCACTGCAGGCTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASTDWSP*HCRLLS
Trigger: ACTTAGGAGCCTGCAGTGGCATGGTGACCAGTCTGT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGTCAAGAGAGCTGCGCTaGTGTCATTACACGTCAACC +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVSRELR*CHYTST
Trigger: GGTTGACGTGTAATGACACCAGCGCAGCTCTCTTGA...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTTGCCTTCCCTGTCCTTaGCCGGGTGCAACCGGATTC +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGICLPCP*PGATGF
Trigger: GAATCCGGTTGCACCCGGCCAAGGACAGGGAAGGCA...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGATACTGAAAGTCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCATGCCTTCCCTGTCCTTaGCCGGGTGCAACCGGATTC +
Preference number: 4 (lower is better)
Translates to: QILKVPSCLLKITETQRSCLPCP*PGATGF
Trigger: GAATCCGGTTGCACCCGGCCAAGGACAGGGAAGGCA...TGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGACTTTCAGTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CCA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTTGTCGGGGCTCAGGTTaGGAGACAAGGTCACGTTGG +
Preference number: 4 (lower is better)
Translates to: TGNRLVHLVRQMINTRQACRGSG*ETRSRW
Trigger: CCAACGTGACCTTGTCTCCCAACCTGAGCCCCGACA...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTTCCCTGAAGTCGGCGTaGCTCGGCGGGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLSLKSA*LGGWCL
Trigger: CAAACACCACCCGCCGAGCCACGCCGACTTCAGGGA...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp AAAATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTGCTTTGGACCATATCCTGGTCAGCCGCGGTaGCTTCATCAGGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: KIPRDIFVQTRCSCFGPYPGQPR*LHQGTC
Trigger: ACAAGTCCCCTGATGAAGCCACCGCGGCTGACCAGG...ATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTGTCGCGAGGCAGAGCTaGTGGCACTGCGGATCACTT +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIVARQS*WHCGSL
Trigger: AAGTGATCCGCAGTGCCACCAGCTCTGCCTCGCGAC...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGCCACTTAAAACGATTTaGTCAACTTGCACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVPLKTI*STCTKK
Trigger: CTTCTTGGTGCAAGTTGACCAAATCGTTTTAAGTGG...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAGAGAGGGTGCGTTCCTaGTTCTCAGGTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPERVRS*FSGGQV
Trigger: CACCTGCCCACCTGAGAACCAGGAACGCACCCTCTC...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CCCTGTGTCACTCTGAACACTGGGGCTTTAGAAACCCTTGCTGGAGTGTCCCCTCAAACTCCACTCAGATaGACTGTTACCCACACTAGT +
Preference number: 4 (lower is better)
Translates to: PCVTLNTGALETLAGVSPQTPLR*TVTHTS
Trigger: ACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTTG...AGGGGACACTCCAGCAAGGGTTTCTAAAGCCCCAGTGTTCAGAGTGACACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGTGGTTTGGGGTGCACTaGCCACTTCTTGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRWFGVH*PLLAGF
Trigger: GAACCCAGCAAGAAGTGGCCAGTGCACCCCAAACCA...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp AAAATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTGCTTTGGACCATATAGCGTCAACTGCTGCTaGTCTGTAGCCAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KIPRDIFVQTRCSCFGPYSVNCC*SVARPS
Trigger: GCTGGGCCTGGCTACAGACCAGCAGCAGTTGACGCT...ATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp GAGTGGATGGGCCCCTCTGTATGCAGCTTCACGTATCTGAGATCACATCTGTATGGTGCTTGGGCTTCATaGAGCATCTCAGTACCCAAC +
Preference number: 4 (lower is better)
Translates to: EWMGPSVCSFTYLRSHLYGAWAS*SISVPN
Trigger: GTTGGGTACTGAGATGCTCCATGAAGCCCAAGCACC...ATACAGATGTGATCTCAGATACGTGAAGCTGCATACAGAGGGGCCCATCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR CCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCTTGAACTGCTGCTGCTaGGAGACAATGGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGLNCCC*ETMGWP
Trigger: TGGCCACCCCATTGTCTCCCAGCAGCAGCAGTTCAA...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTAAGATTCCGCATGTATaGCCTTGGCGAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGKIPHV*PWRGGG
Trigger: TCCCCCACCTCGCCAAGGCCATACATGCGGAATCTT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTTGTCCTAAGCACGCCTaGTGCTTCCCTTGTGATCGG +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGCPKHA*CFPCDR
Trigger: CCGATCACAAGGGAAGCACCAGGCGTGCTTAGGACA...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACAAAAGACCTGGGGGACTaGAGTCTCCCCAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTKDLGD*SLPKVR
Trigger: TCTGACTTTGGGGAGACTCCAGTCCCCCAGGTCTTT...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCAGAGCAGCCAGTGAGTaGCTGGTATCTGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFRAASE*LVSEGL
Trigger: CAGGCCTTCAGATACCAGCCACTCACTGGCTGCTCT...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCAGGCAGTGTTTGGGTTaGGAACATGGTGCTTCGTAC +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACRQCLG*EHGASY
Trigger: GTACGAAGCACCATGTTCCCAACCCAAACACTGCCT...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCAGAAAGAAAGGGCAATaGGTGTGTTTAAACAGCAAG +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFRKKGQ*VCLNSK
Trigger: CTTGCTGTTTAAACACACCCATTGCCCTTTCTTTCT...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTAAACAGAGGGCCGAGTaGGAACTTCAGGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGKQRAE*ELQGHL
Trigger: CAGGTGACCCTGAAGTTCCCACTCGGCCCTCTGTTT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp ACATGTTGGGTGCCCACCAAAATGAAAAACAGCTCCTaGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TCWVPTKMKNSS*AIRSQLGPSQV
Trigger: CACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTCATTTTGGTGGGCACCCAACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTACACCTTCCACGAGGTTaGGGTGGTTGCAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLHLPRG*GGCKLH
Trigger: ATGCAGTTTGCAACCACCTCAACCTCGTGGAAGGTG...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGAGTCTAAAGAAGGCATaGTGTTCAACACAGATTTTC +
Preference number: 4 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVSLKKA*CSTQIF
Trigger: GAAAATCTGTGTTGAACATCATGCCTTCTTTAGACT...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTCAGTTCTGTAGGCTGTaGAGCAAGGCTCCGGATAGA +
Preference number: 4 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLQFCRL*SKAPDR
Trigger: TCTATCCGGAGCCTTGCTTCACAGCCTACAGAACTG...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTGACAGCTCGGAAAGGTaGGGACTGCCAGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLDSSER*GLPVRE
Trigger: CTCCCTGACTGGCAGTCCTCACCTTTCCGAGCTGTC...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGAGGTGCTTCATGCCCTaGATGTTCTTCAGCATGACA +
Preference number: 4 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWRCFMP*MFFSMT
Trigger: TGTCATGCTGAAGAACATTCAGGGCATGAAGCACCT...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGAGGTGCTTCATGCCCTaGATGTTCTTCAGCATGACA +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVRCFMP*MFFSMT
Trigger: TGTCATGCTGAAGAACATTCAGGGCATGAAGCACCT...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCACAATCAAATCTTTCTTaGGTTCGTGCAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAAQSNLS*VRAASG
Trigger: TCCAGAAGCTGCACGAACTCAAGAAAGATTTGATTG...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCCGTGGACTTTAAACTaGTTGGAGGCCGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIPWTLN*LEAVSP
Trigger: GGGGCTGACGGCCTCCAATCAGTTTAAAGTCCACGG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTTCTCCACTGCGATGCTaGAGTCCACCATGGAGACGC +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGISPLRC*SPPWRR
Trigger: GCGTCTCCATGGTGGACTTCAGCATCGCAGTGGAGA...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGGGGTTTTCATGCTTGTaGCACAGACAGACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLGFSCL*HRQTAK
Trigger: TTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCC...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GACATCTCCCGTGGGTGTGCCAGTTCTTGTGGAGTTAAGACAGGATTTTTGGAAGTTGAAGCTGATGATTaGCATCTCCCGTGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: DISRGCASSCGVKTGFLEVEADD*HLPWVC
Trigger: GCACACCCACGGGAGATGTCAATCATCAGCTTCAAC...TTCCAAAAATCCTGTCTTAACTCCACAAGAACTGGCACACCCACGGGAGATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTAACTTGCTCACCGAGATaGTGCAGTTGGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLTCSPR*CSWRLL
Trigger: CAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGT...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTATTTTTGCACAGGGATaGGAAATGACATGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAIFAQG*EMTCVD
Trigger: GTCAACACATGTCATTTCTCATCCCTGTGCAAAAAT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CCCTGTGTCACTCTGAACACTGGGGCTTTAGAAACCCTTGCTGGAGTGTCCCCTTGCACATATACAGGCTaGATATCCCAAATCCCCAAT +
Preference number: 4 (lower is better)
Translates to: PCVTLNTGALETLAGVSPCTYTG*ISQIPN
Trigger: ATTGGGGATTTGGGATATTCAGCCTGTATATGTGCA...AGGGGACACTCCAGCAAGGGTTTCTAAAGCCCCAGTGTTCAGAGTGACACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTCACAGAAATTACCCATaGTCCCACCACTGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIHRNYP*SHHCSP
Trigger: TGGGCTACAGTGGTGGGATCATGGGTAATTTCTGTG...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp AAAATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTGCTTTGGACCATATAGGGAATTGTGGTCATaGGGGGACCCCGTTCTCACC +
Preference number: 4 (lower is better)
Translates to: KIPRDIFVQTRCSCFGPYRELWS*GDPVLT
Trigger: GGTGAGAACGGGGTCCCCTCATGACCACAATTCCCT...ATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCTGGTGCTTCCCTTGTaGTCGGGTCGCGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFLVLPL*SGRVMS
Trigger: GCTCATCACGCGACCCGATCACAAGGGAAGCACCAG...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCGCCCAGAAGAACCTCTaGGGTCCCTTCCAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASAQKNL*GPFQFK
Trigger: TTTAAACTGGAAGGGACCTCAGAGGTTCTTCTGGGC...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCAGAAATTTCCAAATATaGATCACACATGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFRNFQI*ITHAGK
Trigger: CTTCCCTGCATGTGTGATTCATATTTGGAAATTTCT...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCGCTAATAACCAAAGTTaGGTTTCTGATGCACATTCA +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFANNQS*VSDAHS
Trigger: TGAATGTGCATCAGAAACTCAACTTTGGTTATTAGC...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCAGAAAAGGTCATCTATaGGTAATAACAGACTGGTCA +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFRKGHL*VITDWS
Trigger: TGACCAGTCTGTTATTACTCATAGATGACCTTTTCT...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCTGCGTTCTGTTTCAGTaGGACCTCTCCTCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASCVLFQ*DLSSSY
Trigger: GTAGCTAGAGGAGAGGTCTCACTGAAACAGAACGCA...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCGGACTCACTAGCGTCTaGTATCTAAGTTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASGLTSV*YLSWGS
Trigger: TGAGCCCCAACTTAGATATCAGACGCTAGTGAGTCC...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCAGACTTTATCATCAGTaGGCCAAAGCCAGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACRLYHQ*AKARPF
Trigger: GAAAGGCCTGGCTTTGGCTCACTGATGATAAAGTCT...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTTTGAAAATGTACAGGTaGCGTGGTCCAAACAAAATA +
Preference number: 4 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVLKMYR*RGPNKI
Trigger: TATTTTGTTTGGACCACGTCACCTGTACATTTTCAA...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGAAGTCCTGCTTCACCTaGAGCGCGAACAGGTACCTT +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRKSCFT*SANRYL
Trigger: AAGGTACCTGTTCGCGCTGCAGGTGAAGCAGGACTT...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGGCATGGCGTCCTCTTTaGTCACTGTGCTCTGAAACC +
Preference number: 4 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLAWRPL*SLCSET
Trigger: GGTTTCAGAGCACAGTGAGCAAAGAGGACGCCATGC...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTTATGAGACTTTTCAGTaGTTCCGGCATGGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIYETFQ*FRHGVL
Trigger: GAGGACGCCATGCCGGAAGCACTGAAAAGTCTCATA...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGCATCTCCGTGATCTCTaGCAAAGCGGCTCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRHLRDL*QSGSAV
Trigger: GACTGCCGAGCCGCTTTGGCAGAGATCACGGAGATG...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp AAAATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTGCTTTGGACCATATCGTACCGTGGAGCTGTaGCACCATCTCCGTGATCTC +
Preference number: 4 (lower is better)
Translates to: KIPRDIFVQTRCSCFGPYRTVEL*HHLRDL
Trigger: GAGATCACGGAGATGGTGGCACAGCTCCACGGTACG...ATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCGTACCGTGGAGCTGTaGCACCATCTCCGTGATCTC +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIRTVEL*HHLRDL
Trigger: GAGATCACGGAGATGGTGGCACAGCTCCACGGTACG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTTCTTTCTTGAGTTCGTaGAGCTTCTGGAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVSFLSS*SFWKFS
Trigger: GGAGAATTTCCAGAAGCTGCACGAACTCAAGAAAGA...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACGCCACGATGATGGACTaGCGCTGGCCCCGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNATMMD*RWPRRV
Trigger: GACCCTCCGGGGCCAGCGGCAGTCCATCATCGTGGC...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACAGCGCCCCCAGCGGATaGCAGGACTGGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNSAPSG*QDWRWE
Trigger: CTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCT...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATAAACCGTGTTCCCTGTaGAGTCCGACTGACACTACC +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYKPCSL*SPTDTT
Trigger: GGTAGTGTCAGTCGGACTGCACAGGGAACACGGTTT...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAGCTCCACAGAGAGGGTaGGTTCCTGGTTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPAPQRG*VPGSQV
Trigger: CACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGC...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGGTGTTCCCCAGGGTGTaGCGTTACCTGATTTTTAAG +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVVFPRV*RYLIFK
Trigger: CTTAAAAATCAGGTAACGGCACACCCTGGGGAACAC...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTTGCTTATCATCTCTCTaGAGGCTTGGCTGTGGTACC +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMICLSSL*RLGCGT
Trigger: GGTACCACAGCCAAGCCTGCAGAGAGATGATAAGCA...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTTCTGGCAGCCCGGGATaGTGGACCTGTGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVSGSPG*WTCAWL
Trigger: CAGCCAAGCACAGGTCCAGCATCCCGGGCTGCCAGA...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAAAAGGAATGGAAGTACTaGTGCCTCTGGCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQKEWKY*CLWQPG
Trigger: CCCGGGCTGCCAGAGGCAGCAGTACTTCCATTCCTT...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACATCACCTCAGCAAACGTaGTCCACCAGGCTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTSPQQT*STRLKE
Trigger: TTCTTTGAGCCTGGTGGAGCACGTTTGCTGAGGTGA...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATTGGCAGGGTAGATGCTaGTGGCTTTTCCTGACTGAG +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHWQGRC*WLFLTE
Trigger: CTCAGTCAGGAAAAGCCAGCAGCATCTACCCTGCCA...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCATGCTGACAAGACACTaGATACAATGGAACAACGGA +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEAMLTRH*IQWNNG
Trigger: TCCGTTGTTCCATTGTATGCAGTGTCTTGTCAGCAT...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCAGTGGTATGAGTCCATaGTTTATTGACGTACTTCAT +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFSGMSP*FIDVLH
Trigger: ATGAAGTACGTCAATAAAGCATGGACTCATACCACT...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAACTCGCCAAGAAGGCGTaGCACGGTTCAGAACAATCC +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQLAKKA*HGSEQS
Trigger: GGATTGTTCTGAACCGTGGCACGCCTTCTTGGCGAG...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCCCCAGGAGCTCTTTGTaGAACTTCAAATGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASPRSSL*NFKCLL
Trigger: CAGGAGGCATTTGAAGTTCCACAAAGAGCTCCTGGG...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTAACAACAACGTGCTTTaGCCTTCTAATCTGTTTCAC +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCANNNVL*PSNLFH
Trigger: GTGAAACAGATTAGAAGGCCAAAGCACGTTGTTGTT...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAAATTCCAAGGTATCCTaGTACGCACTATTGGCATCT +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAANSKVS*YALLAS
Trigger: AGATGCCAATAGTGCGTACCAGGATACCTTGGAATT...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCATGTCGGGGCTCAGGTTaGGAGACAAGGTCACGTTGG +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPCRGSG*ETRSRW
Trigger: CCAACGTGACCTTGTCTCCCAACCTGAGCCCCGACA...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GACATCTCCCGTGGGTGTGCCAGTTCTTGTGGAGTTAAGACAGGATTTTTGGAATTGATCATCGTACCGTaGAGCTGTGCCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: DISRGCASSCGVKTGFLELIIVP*SCATIS
Trigger: GGAGATGGTGGCACAGCTCCACGGTACGATGATCAA...TTCCAAAAATCCTGTCTTAACTCCACAAGAACTGGCACACCCACGGGAGATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTAGGTCAATGGCCATCTaGATGTCCTCAACCCACTTC +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIRSMAI*MSSTHF
Trigger: GAAGTGGGTTGAGGACATCCAGATGGCCATTGACCT...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GACATCTCCCGTGGGTGTGCCAGTTCTTGTGGAGTTAAGACAGGATTTTTGGAATCTCCGCCAGGTCAATaGCCATCTGGATGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: DISRGCASSCGVKTGFLESPPGQ*PSGCPQ
Trigger: TTGAGGACATCCAGATGGCCATTGACCTGGCGGAGA...TTCCAAAAATCCTGTCTTAACTCCACAAGAACTGGCACACCCACGGGAGATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTTCATCCTCTGACTCCTaGTCAGCCGCGGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGISSSDS*SAAVAS
Trigger: TGAAGCCACCGCGGCTGACCAGGAGTCAGAGGATGA...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGTCATCCTCTGACTCCTaGTCAGCCGCGGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRSSSDS*SAAVAS
Trigger: TGAAGCCACCGCGGCTGACCAGGAGTCAGAGGATGA...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCACGAGCAGAGGCAGGCTaGCAAGGGGATGATTGTCCT +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPRAEAG*QGDDCP
Trigger: AGGACAATCATCCCCTTGCCAGCCTGCCTCTGCTCG...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCACAACCCTGCTACGGTTaGAAAGAGTTACCACTTAAA +
Preference number: 4 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAAQPCYG*KELPLK
Trigger: TTTAAGTGGTAACTCTTTCCAACCGTAGCAGGGTTG...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTCAACCCTGCTACGGTTaGAAAGAGTTACCACTTAAA +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVQPCYG*KELPLK
Trigger: TTTAAGTGGTAACTCTTTCCAACCGTAGCAGGGTTG...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGGTCCAGGTATTGCACTaGATCTCGGCTTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQVQVLH*ISALLN
Trigger: GTTAAGCAAAGCCGAGATCCAGTGCAATACCTGGAC...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGAGGGGCCAAAGCCACTaGAAACCGTGTTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRRGQSH*KPCSLC
Trigger: GCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCT...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATGGAAAACCAAGGGAATaGCAGCCACCCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYGKPRE*QPPHHH
Trigger: ATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTAGGTATTTTACATTTTTaGAGGGACCGTCTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLGILHF*RDRLWS
Trigger: ACTCCAAAGACGGTCCCTCCAAAAATGTAAAATACC...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATTCTTTAGGGAAACCCTaGTCTCGTGACCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHSLGKP*SRDPRL
Trigger: CAACCTGGGGTCACGAGACCAGGGTTTCCCTAAAGA...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCCAAGAGCAACCATGCTaGAAAACAGTCCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACQEQPC*KTVLLC
Trigger: GCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTG...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTTTTAAAACCGACTTCTaGACATTCATGTGGACAGAT +
Preference number: 4 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVFKTDF*TFMWTD
Trigger: ATCTGTCCACATGAATGTCCAGAAGTCGGTTTTAAA...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTACCCAACCCTACCTCTaGCCTTCCTCCACTCTTAGT +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGTQPYL*PSSTLS
Trigger: ACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTTGGGT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCGATGTCTGTGTCGAGTaGCCAATCTACACCGAAATG +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACDVCVE*PIYTEM
Trigger: CATTTCGGTGTAGATTGGCCACTCGACACAGACATC...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTTCCATCAGCCATTCTTaGTGCTTCTGGAGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGSISHS*CFWSEQ
Trigger: CTGCTCGCTCCAGAAGCACCAAGAATGGCTGATGGA...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCGCTGCTGAAAGGCAGTaGGAGGAGACTTTATCATCA +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACAAERQ*EETLSS
Trigger: TGATGATAAAGTCTCCTCCCACTGCCTTTCAGCAGC...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACATTGCTGCACTGCACCTaGGAACACACATTTAGGGGA +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTLLHCT*EHTFRG
Trigger: TCCCCTAAATGTGTGTTCCCAGGTGCAGTGCAGCAA...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp GGTCAGTTGGCCTTTTCCCAAGACGCTACTCCAGCTTaGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGT +
Preference number: 4 (lower is better)
Translates to: GQLAFSQDATPA*LIGPKKERAMG
Trigger: ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTGGGAAAAGGCCAACTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AATGAATCTTCCCCTAGTGGCAAACAACCCACAGCAGAAAAGCTGTATTGCTTCCACGTTCCAAGGTACTaGTCCCCGAATTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: NESSPSGKQPTAEKLYCFHVPRY*SPNFPG
Trigger: CCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTG...GAAGCAATACAGCTTTTCTGCTGTGGGTTGTTTGCCACTAGGGGAAGATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR TCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTACCGTGATCTTTTTGTaGTCAGGAAACTCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMITVIFL*SGNSRP
Trigger: TGGCCTCGAGTTTCCTGATCACAAAAAGATCACGGT...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCATGGCAACGGCCAGATTaGTCTTCGTGCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPWQRPD*SSCLPC
Trigger: ACAGGGAAGGCACGAAGATCAATCTGGCCGTTGCCA...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CAGATACTGAAAGTCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCATGGCAACGGCCAGATTaGTCTTCGTGCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: QILKVPSCLLKITETQRSWQRPD*SSCLPC
Trigger: ACAGGGAAGGCACGAAGATCAATCTGGCCGTTGCCA...TGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGACTTTCAGTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR TCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAAGAAAGCGCTTCCTCTTaGAGCTCAGCTTCCGCACCT +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQESASS*SSASAP
Trigger: AGGTGCGGAAGCTGAGCTTCAAGAGGAAGCGCTTTC...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTGAAAGCGCTTCCTCTTaGAGCTCAGCTTCCGCACCT +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIESASS*SSASAP
Trigger: AGGTGCGGAAGCTGAGCTTCAAGAGGAAGCGCTTTC...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGTCGAGAACCTGCTTCTaGGTCCGACCACTGAACCGA +
Preference number: 4 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRSRTCF*VRPLNR
Trigger: TCGGTTCAGTGGTCGGACTCAGAAGCAGGTTCTCGA...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAGCAGGAGGAAGGTGTTaGGCGGTAGGTAACACACCT +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPAGGRC*AVGNTP
Trigger: AGGTGTGTTACCTACCGCTCAACACCTTCCTCCTGC...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAACTCGCTTTCCGCCCTaGAGTAGTAGACGTGGGACT +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPTRFPP*SSRRGT
Trigger: AGTCCCACGTCTACTACTTCAGGGCGGAAAGCGAGT...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTGCCCTGTCTTGTGTTaGACGGATGTGTGTGTACTG +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYCPVLC*TDVCVL
Trigger: CAGTACACACACATCCGTTCAACACAAGACAGGGCA...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCACCACTCACAGGACGGTaGCAGTCCAGGTATTGCACT +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPPLTGR*QSRYCT
Trigger: AGTGCAATACCTGGACTGTCACCGTCCTGTGAGTGG...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAATGGTGCTGATCAATaGCACACGGGTTTTCATGCT +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQNGADQ*HTGFHA
Trigger: AGCATGAAAACCCGTGTGTCATTGATCAGCACCATT...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTAGGGTGTGCCGTTACCTaGTTTTTAAGTGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KMGFLPSHRECICIPGILGCAVT*FLSEPG
Trigger: CCCTGGCTCACTTAAAAATCAGGTAACGGCACACCC...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTATTTTGCATACTCCTTaGAATGTGACTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVILHTP*NVTLQR
Trigger: CCTCTGAAGAGTCACATTTCAAGGAGTATGCAAAAT...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGTCTCTCCTGGACCTGTaGTTTGGAGTCTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWSLLDL*FGVCCK
Trigger: TTTACAACAGACTCCAAATCACAGGTCCAGGAGAGA...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CTTAAAATCACTGAAACGCAACGTTCATCCTCTTCCTCATACTTCGTGTCAATGTACGTCGTTTCTCTGTaGAGTCGCCCACGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LKITETQRSSSSSYFVSMYVVSL*SRPRLR
Trigger: CCGGAGCCGTGGGCGACTTCACAGAGAAACGACGTA...CATTGACACGAAGTATGAGGAAGAGGATGAACGTTGCGTTTCAGTGATTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR TCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCCAAATATGAGGGGCTaGCTCCCGGGGATCAGCATC +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFPNMRG*LPGISI
Trigger: GATGCTGATCCCCGGGAGTCAGCCCCTCATATTTGG...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCGAGTCCATGCTTTATTaGCGTACTTCATTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACESMLY*RTSLFR
Trigger: GCGGAACAATGAAGTACGTCAATAAAGCATGGACTC...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAAGCATGCTGGACACCTTaGCTTTGCAGTGACGTGGAA +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQACWTP*LCSDVE
Trigger: TTCCACGTCACTGCAAAGTCAAGGTGTCCAGCATGC...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGCCTGGGGTCGGCCTCTaGTCTATTTCTCCCATGATG +
Preference number: 4 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRPGVGL*SISPMM
Trigger: CATCATGGGAGAAATAGAGCAGAGGCCGACCCCAGG...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGGAGGTGGTTGCAAACTaGATCCAGCAGCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFREVVAN*IQQHLP
Trigger: GGGAAGGTGCTGCTGGATGCAGTTTGCAACCACCTC...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAGAGGTGGTTGCAAACTaGATCCAGCAGCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPEVVAN*IQQHLP
Trigger: GGGAAGGTGCTGCTGGATGCAGTTTGCAACCACCTC...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTAACTTAACAACAACGTaGTTTGGCCTTCTAATCTGT +
Preference number: 4 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCANLTTT*FGLLIC
Trigger: ACAGATTAGAAGGCCAAAGCACGTTGTTGTTAAGTT...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CAGATACTGAAAGTCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCACTGTCCTTGGCCGGGTaGAACCGGATTCCATACATC +
Preference number: 4 (lower is better)
Translates to: QILKVPSCLLKITETQRSLSLAG*NRIPYI
Trigger: GATGTATGGAATCCGGTTGCACCCGGCCAAGGACAG...TGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGACTTTCAGTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR GCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTTTTTCCAGAAGGACTTaGAGAAATCCCGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIFSRRT*RNPDWP
Trigger: TGGCCAGTCGGGATTTCTGCAAGTCCTTCTGGAAAA...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACATTTTCCAGAAGGACTTaGAGAAATCCCGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTFSRRT*RNPDWP
Trigger: TGGCCAGTCGGGATTTCTGCAAGTCCTTCTGGAAAA...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCATCTCCGTGATCTCTaGCAAAGCGGCTCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLHLRDL*QSGSAV
Trigger: GACTGCCGAGCCGCTTTGGCAGAGATCACGGAGATG...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCAGGGGCGGGGCTGCTaGTCTTCTCCGCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNQGRGC*SSPPGQ
Trigger: TTGACCTGGCGGAGAAGAGCAGCAGCCCCGCCCCTG...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CCCTGTGTCACTCTGAACACTGGGGCTTTAGAAACCCTTGCTGGAGTGTCCCCTTGGAACGCTGTGTGCTaGAAATTGCTTATTAATCAG +
Preference number: 4 (lower is better)
Translates to: PCVTLNTGALETLAGVSPWNAVC*KLLINQ
Trigger: CTGATTAATAAGCAATTTGCAGCACACAGCGTTCCA...AGGGGACACTCCAGCAAGGGTTTCTAAAGCCCCAGTGTTCAGAGTGACACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCATCGGGAATGCATATaGATCCCTGGAATCTTACTG +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVHRECI*IPGILL
Trigger: CAGTAAGATTCCAGGGATGCATATGCATTCCCGATG...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAACGGGGAACGCAGCACTaGGGGGTTACCAAATATGAG +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQRGTQH*GVTKYE
Trigger: CTCATATTTGGTAACCCCGCAGTGCTGCGTTCCCCG...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCTGTCTAGGCTCTCCATaGAAGCTACAGTCACAGATG +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASCLGSP*KLQSQM
Trigger: CATCTGTGACTGTAGCTTGCATGGAGAGCCTAGACA...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATACTTCAAATGCCTCCTaGGTGTCATCCAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYTSNAS*VSSSIW
Trigger: CCAGATGCTGGATGACACCCAGGAGGCATTTGAAGT...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTCAAGAGAGCTGCGCTaGTGTCATTACACGTCAACC +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYSRELR*CHYTST
Trigger: GGTTGACGTGTAATGACACCAGCGCAGCTCTCTTGA...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTTCAAGAGAGCTGCGCTaGTGTCATTACACGTCAACC +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGSRELR*CHYTST
Trigger: GGTTGACGTGTAATGACACCAGCGCAGCTCTCTTGA...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGGCAATCTCTAGGAGCTaGAAATCTGATTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVAISRS*KSDSAG
Trigger: ACCAGCAGAATCAGATTTCCAGCTCCTAGAGATTGC...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGCGCACTATTGGCATCTaGCCGGAGCTTGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRRTIGI*PELDEK
Trigger: TTTCTCATCAAGCTCCGGCCAGATGCCAATAGTGCG...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGTGCAGAAATCCCGACTaGCCATCAGGAATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRCRNPD*PSGIPR
Trigger: CCTTGGAATTCCTGATGGCCAGTCGGGATTTCTGCA...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGTCAGTGCTTCCGGCATaGCGTCCTCTTTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRSVLPA*RPLCSL
Trigger: CAGTGAGCAAAGAGGACGCCATGCCGGAAGCACTGA...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGAGACAGGAGAGCTGCTaGGAAGCCATGTTTTTGATT +
Preference number: 4 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWRQESC*EAMFLI
Trigger: AATCAAAAACATGGCTTCCCAGCAGCTCTCCTGTCT...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGAGACAGGAGAGCTGCTaGGAAGCCATGTTTTTGATT +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVRQESC*EAMFLI
Trigger: AATCAAAAACATGGCTTCCCAGCAGCTCTCCTGTCT...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCACGTGAAACCCCGCAGTaGAACGCTGTGTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPRETPQ*NAVCCK
Trigger: TTTGCAGCACACAGCGTTCCACTGCGGGGTTTCACG...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCACCAAGAAGTAGGTTaGGAACAGGTGTTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVHQEVG*EQVFSG
Trigger: ACCTGAAAACACCTGTTCCCAACCTACTTCTTGGTG...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTAGTCCAGCAAGTAGTTTaGAATCAATCAATCATTCAG +
Preference number: 4 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLVQQVV*NQSIIQ
Trigger: CTGAATGATTGATTGATTCCAAACTACTTGCTGGAC...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTGACACCAGTGTGGTTTaGGGTGCACTGGCCACTTCT +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIDTSVV*GALATS
Trigger: AGAAGTGGCCAGTGCACCCCAAACCACACTGGTGTC...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTATCCTGTCGGGGGAGGTaGGGTTTGATGGAGTTAGAA +
Preference number: 4 (lower is better)
Translates to: KMGFLPSHRECICIPGILSCRGR*GLMELE
Trigger: TTCTAACTCCATCAAACCCCACCTCCCCCGACAGGA...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTAGCCGCTCGAGGGACTaGGTTCTAATGAATACTGGT +
Preference number: 4 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLSRSRD*VLMNTG
Trigger: ACCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCT...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTTCTGGGTTTCTGGAGTaGGAGGGTTCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLSGFLE*EGSCSS
Trigger: GCTGCTGCACGAACCCTCCCACTCCAGAAACCCAGA...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGTCTCATCAGCATCTTTaGGTGCATTGCCTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQSHQHL*VHCLLL
Trigger: CAACAGAAGGCAATGCACCCAAAGATGCTGATGAGA...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTATCTCTCTGCAGGCTTaGCTGTGGTACCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLISLQA*LWYPLL
Trigger: AAGAAGTGGGTACCACAGCCAAGCCTGCAGAGAGAT...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCACACATGGGATGCGCCTaGCTTGTCCTAAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPHMGCA*LVLSVE
Trigger: CTCCACACTTAGGACAAGCCAGGCGCATCCCATGTG...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCATGCTCTTACGGGCTTaGCTAACAGAGAGCCAATAT +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACMLLRA*LTESQY
Trigger: ATATTGGCTCTCTGTTAGCCAAGCCCGTAAGAGCAT...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAACATTCTTGGTGCTTCTaGAGCGAGCAGCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQHSWCF*SEQPVC
Trigger: GCACACTGGCTGCTCGCTCCAGAAGCACCAAGAATG...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCAGACACTGCATACAATaGAACAACGGAAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFRHCIQ*NNGKCF
Trigger: AAAACATTTTCCGTTGTTCCATTGTATGCAGTGTCT...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCAAGTGCAAGCCTTGTTaGAAGAGCAAAGTTCACCTC +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACKCKPC*KSKVHL
Trigger: GAGGTGAACTTTGCTCTTCCAACAAGGCTTGCACTT...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACAACAGTCTGTACAAACTaGTGTCCATACCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTTVCTN*CPYQQV
Trigger: CACCTGCTGGTATGGACACCAGTTTGTACAGACTGT...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp ACGGTGACAGTCCAGGTATTGCACTGGATCTCGGCTTaGCTTAACAGAAAACAACCCTGCTACGGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: TVTVQVLHWISA*LNRKQPCYGWK
Trigger: TTTCCAACCGTAGCAGGGTTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTGCAATACCTGGACTGTCACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CAA 72 bp GTGTACACCACTCACAGGACGGTGACAGTCCAGGTATaGCACTGGATCTCGGCTTTGCTTAACAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: VYTTHRTVTVQV*HWISALLNRKQ
Trigger: TTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTGCAATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
3UTR CAA 72 bp GACAGAGCCCTGAGCTACAGATGCTTGAGTGGGTTATaGTGTCGGTTTGCTAGTGCAGTCTGGTTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: DRALSYRCLSGL*CRFASAVWFLS
Trigger: GCTTAAAAACCAGACTGCACTAGCAAACCGACACAATAACCCACTCAAGCATCTGTAGCTCAGGGCTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 72 bp GATCCCACCACTGTAGCCCAAATCTCATCAGCATCTTaGGGTGCATTGCCTTCTGTTGTCATACCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: DPTTVAQISSAS*GALPSVVIPGH
Trigger: ATGACCTGGTATGACAACAGAAGGCAATGCACCCAAAGATGCTGATGAGATTTGGGCTACAGTGGTGGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CCTTTAAGAGGCACCAAATCTAGTAGATCAAACCAAGCCTCCTGGAGACCCGTTCCAGCATCTGGATTTTaGTGGACACGAGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PLRGTKSSRSNQASWRPVPASGF*WTRVFL
Trigger: CAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGG...AACGGGTCTCCAGGAGGCTTGGTTTGATCTACTAGATTTGGTGCCTCTTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR TCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCCCAGCATCTGGATTTTaGTGGACACGAGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFPASGF*WTRVFL
Trigger: CAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGG...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATCCAGCATCTGGATTTTaGTGGACACGAGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYPASGF*WTRVFL
Trigger: CAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGG...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCACCGTGATCTTTTTGTaGTCAGGAAACTCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFTVIFL*SGNSRP
Trigger: TGGCCTCGAGTTTCCTGATCACAAAAAGATCACGGT...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTGATCCAGCCACACCGTaGTCTTTTTGTGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGDPATP*SFCDQE
Trigger: TTCCTGATCACAAAAAGATCACGGTGTGGCTGGATC...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AAAATCACTGAAACGCAACGTTCATCCTCTTCCTCATACTTCGTGTCAATGTTGCACGTCAACCTGCCTTaGGCCAAGTCCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: KITETQRSSSSSYFVSMLHVNLP*AKSCFT
Trigger: GGTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTG...CAACATTGACACGAAGTATGAGGAAGAGGATGAACGTTGCGTTTCAGTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR TCA 90 bp AACAAAACCCAGATACTGAAAGTCCCTTCCTGCCTCCTTAAAATCACTGAAACGGAAAGCGCTTCCTCTTaGAGCTCAGCTTCCGCACCT +
Preference number: 4 (lower is better)
Translates to: NKTQILKVPSCLLKITETESASS*SSASAP
Trigger: AGGTGCGGAAGCTGAGCTTCAAGAGGAAGCGCTTTC...CGTTTCAGTGATTTTAAGGAGGCAGGAAGGGACTTTCAGTATCTGGGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR TCA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCAGTCTAAAGAAGGCATaGTGTTCAACACAGATTTTC +
Preference number: 4 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEASLKKA*CSTQIF
Trigger: GAAAATCTGTGTTGAACATCATGCCTTCTTTAGACT...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTTTGCTCACTGTGCTCTaGAACCACGAAGTGATAACT +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMILLTVL*NHEVIT
Trigger: AGTTATCACTTCGTGGTTTCAGAGCACAGTGAGCAA...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGATGATTGTCCTGGTGTaGTTTGTAGAAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVMIVLV*FVEEQA
Trigger: TGCCTGTTCTTCTACAAATCACACCAGGACAATCAT...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAACAAGAGACTCTTTGTaGCTCAACACGTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPTRDSL*LNTWGR
Trigger: GCGACCCCACGTGTTGAGTCACAAAGAGTCTCTTGT...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTGGGGACTACGTACCATaGTTTCATAGTGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TGNRLVHLVRQMINTRQAGDYVP*FHSALQ
Trigger: CTGCAGAGCACTATGAAATCATGGTACGTAGTCCCC...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGTCAGCAAAGGCAGAGTaGCCTAATAGGGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLSAKAE*PNRACS
Trigger: AGAACATGCCCTATTAGGTCACTCTGCCTTTGCTGA...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGCGACAGGCCATAACTTaGGTCTATTGCCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLRQAIT*VYCLAF
Trigger: AAAGGCAAGGCAATAGACTCAAGTTATGGCCTGTCG...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAAACCGTGCATACACTGTaGCATGAGCTTGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQTVHTL*HELGLP
Trigger: TGGAAGGCCAAGCTCATGTCACAGTGTATGCACGGT...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTAACTTAACAACAACGTaGTTTGGCCTTCTAATCTGT +
Preference number: 4 (lower is better)
Translates to: GKPREWQPPHHHREQADVNLTTT*FGLLIC
Trigger: ACAGATTAGAAGGCCAAAGCACGTTGTTGTTAAGTT...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCATCCTCTTCCTCATCATTACACGTCAACCTaGCTTGAGCCAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLPASLKSLKRNVHPLPHHYTST*LEPSPA
Trigger: AGCAGGACTTGGCTCAAGGCAGGTTGACGTGTAATG...ATGAGGAAGAGGATGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR GCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGTGCTTCCTTTCAAACTaGACCTTCTTATGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQCFLSN*TFLCPP
Trigger: AGGAGGACATAAGAAGGTGCAGTTTGAAAGGAAGCA...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAGCATGGCGTCCTCTTTaGTCACTGTGCTCTGAAACC +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPAWRPL*SLCSET
Trigger: GGTTTCAGAGCACAGTGAGCAAAGAGGACGCCATGC...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCCGCCAGGTGCTTCATaGCCTGAATGTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIPPGAS*PECSSA
Trigger: TGCTGAAGAACATTCAGGGCATGAAGCACCTGGCGG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCACCGCCAGGTGCTTCATaGCCTGAATGTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPPPGAS*PECSSA
Trigger: TGCTGAAGAACATTCAGGGCATGAAGCACCTGGCGG...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCGGTGCCAGCACACGTaGACCATTGTGTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNRCQHT*TIVLPR
Trigger: CCGCGGCAACACAATGGTGCACGTGTGCTGGCACCG...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAACCACCCACAGCTTCTaGCACCCGTTGCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPTTHSF*HPLLFL
Trigger: CAAAAACAGCAACGGGTGGCAGAAGCTGTGGGTGGT...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGGGCTCTTCGTCCGTTTaGAAGTTGCTGTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRGSSSV*KLLFVS
Trigger: GGAAACAAACAGCAACTTGCAAACGGACGAAGAGCC...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATGGCTCTTCGTCCGTTTaGAAGTTGCTGTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYGSSSV*KLLFVS
Trigger: GGAAACAAACAGCAACTTGCAAACGGACGAAGAGCC...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CCCTGTGTCACTCTGAACACTGGGGCTTTAGAAACCCTTGCTGGAGTGTCCCCTAAGAAAACGAGTATCTaGATCATTGTGTGTCTCATG +
Preference number: 4 (lower is better)
Translates to: PCVTLNTGALETLAGVSPKKTSI*IIVCLM
Trigger: CATGAGACACACAATGATGCAGATACTCGTTTTCTT...AGGGGACACTCCAGCAAGGGTTTCTAAAGCCCCAGTGTTCAGAGTGACACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATGCCCTGAGCTACAGATaGTTGAGTGGGTTATTGTGT +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYALSYR*LSGLLC
Trigger: ACACAATAACCCACTCAAGCATCTGTAGCTCAGGGC...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATCGAGAGACATCTTTGTaGAGACACGTTGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYRETSL*RHVVPA
Trigger: AGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCG...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAGCAGCACATTTTACGTaGTCACTGGGCATCGTGGCT +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPAAHFT*SLGIVA
Trigger: AGCCACGATGCCCAGTGAGCACGTAAAATGTGCTGC...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAATCTATGAGAGAGCTATaGCTTGGGAGTCGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQSMREL*LGSRGL
Trigger: GAGCCCTCGACTCCCAAGGCATAGCTCTCTCATAGA...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAACTGGCACACACCGACTaGACAGCAGGGACCTTAGAG +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKLAHTD*TAGTLE
Trigger: CTCTAAGGTCCCTGCTGTGCAGTCGGTGTGTGCCAG...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTCCTAAGCACGCCTGGTaGTTCCCTTGTGATCGGGTC +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALPKHAW*FPCDRV
Trigger: GACCCGATCACAAGGGAAGCACCAGGCGTGCTTAGG...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACAGAAGAAATGAAGGTTTaGCCAGAAGAACCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTEEMKV*PEEPLR
Trigger: CCTCAGAGGTTCTTCTGGGCAAACCTTCATTTCTTC...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCAATATGAATCACACATaGAGGGAAGAATCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACNMNHT*REESGP
Trigger: TGGGCCAGATTCTTCCCTGCATGTGTGATTCATATT...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTTGCTGGGGGCAGGCTTaGTGCATTTCACTCACGGAG +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALCWGQA*CISLTE
Trigger: CTCCGTGAGTGAAATGCAGCAAGCCTGCCCCCAGCA...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCTCTTGGAGTTGTGTGTaGTCAGGCGGAAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASSWSCV*SGGKNF
Trigger: GAAATTCTTTCCGCCTGACCACACACAACTCCAAGA...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAATGCCTTCCCTGTCCTTaGCCGGGTGCAACCGGATTC +
Preference number: 4 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKCLPCP*PGATGF
Trigger: GAATCCGGTTGCACCCGGCCAAGGACAGGGAAGGCA...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTTCTCCGCCAGGTCAATaGCCATCTGGATGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGISPPGQ*PSGCPQ
Trigger: TTGAGGACATCCAGATGGCCATTGACCTGGCGGAGA...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTAGTCCAGGTATTGCACTaGATCTCGGCTTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLVQVLH*ISALLN
Trigger: GTTAAGCAAAGCCGAGATCCAGTGCAATACCTGGAC...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAGGAAAACCAAGGGAATaGCAGCCACCCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPGKPRE*QPPHHH
Trigger: ATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGGCAGCAGCTGTTGACTaGTACATGAAGCATTCTTTT +
Preference number: 4 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWAAAVD*YMKHSF
Trigger: AAAAGAATGCTTCATGTACCAGTCAACAGCTGCTGC...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTTGTGTCTGTTTTTCTTaGTTTGCTGTGGGACCTTGC +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMICVCFS*FAVGPC
Trigger: GCAAGGTCCCACAGCAAACCAAGAAAAACAGACACA...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGCTTTGCAGTGATGCATaGGGGAAGCCAAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRLCSDA*GKPSWC
Trigger: GCACCAACTTGGCTTCCCCCATGCATCACTGCAAAG...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAAAAGTACTGCTGCCTCTaGCAGCCCGGGATGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKKYCCL*QPGMLD
Trigger: GTCCAGCATCCCGGGCTGCCAGAGGCAGCAGTACTT...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTATGGCCTTGGCGAGGTaGGGGACCAGCGTTCATAAG +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVMALAR*GTSVHK
Trigger: CTTATGAACGCTGGTCCCCCACCTCGCCAAGGCCAT...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCAAAATGCAGGAATGCTaGGTGAAAGGCAGTGACACT +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASKMQEC*VKGSDT
Trigger: AGTGTCACTGCCTTTCACCCAGCATTCCTGCATTTT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTGATCCAGCCACACCGTaGTCTTTTTGTGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: TGNRLVHLVRQMINTRQADPATP*SFCDQE
Trigger: TTCCTGATCACAAAAAGATCACGGTGTGGCTGGATC...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATAGATTGCACAATGTGTaGAATCAAGAGAGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYRLHNV*NQESCA
Trigger: AGCGCAGCTCTCTTGATTTCACACATTGTGCAATCT...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCAGTTCTGTAGGCTGTaGAGCAAGGCTCCGGATAGA +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLQFCRL*SKAPDR
Trigger: TCTATCCGGAGCCTTGCTTCACAGCCTACAGAACTG...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTAGAATGTTCTTCAGCATaGCATCGCCGATTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLECSSA*HRRFFG
Trigger: ACCAAAGAATCGGCGATGTCATGCTGAAGAACATTC...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGTACCACAAATGGTGCTaGTCAATGACACACGGGTTT +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRYHKWC*SMTHGF
Trigger: AAACCCGTGTGTCATTGATCAGCACCATTTGTGGTA...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAGGGGACTACGTACCATaGTTTCATAGTGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPGDYVP*FHSALQ
Trigger: CTGCAGAGCACTATGAAATCATGGTACGTAGTCCCC...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCCTGCATTGCTCTTGTaGAGTGGCTGGTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIPALLL*SGWFGS
Trigger: AGAACCAAACCAGCCACTTCACAAGAGCAATGCAGG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATCTTCTTGCTGGGTTCTaGTTTTCTTGGAAGTGCATC +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYLLAGF*FSWKCI
Trigger: GATGCACTTCCAAGAAAATCAGAACCCAGCAAGAAG...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATCACAGGGATGAGAAATaGCATGTGTTGACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYHRDEK*HVLTSL
Trigger: GAGAGAAGTCAACACATGTCATTTCTCATCCCTGTG...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GGCCCCTCTGTATGCAGCTTCACGTATCTGAGATCACATCTGTATCTACTCCTAGCAGCTTCACGTATCTaGGATCACATCTGTATCTAC +
Preference number: 4 (lower is better)
Translates to: GPSVCSFTYLRSHLYLLLAASRI*DHICIY
Trigger: GTAGATACAGATGTGATCTCAGATACGTGAAGCTGC...TAGGAGTAGATACAGATGTGATCTCAGATACGTGAAGCTGCATACAGAGGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR TCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAACTGTTCACCAGAGTGTaGATGGTAAGACTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQLFTRV*MVRLCL
Trigger: CAGACACAGTCTTACCATTCACACTCTGGTGAACAG...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCTATCCCGTGGCAAGTTaGTTTTTAATCTTCCCTACT +
Preference number: 4 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACYPVAS*FLIFPT
Trigger: AGTAGGGAAGATTAAAAATCAACTTGCCACGGGATA...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCTCACTGCAGGGAAAGTaGCAAATGCTTTACTTCCTA +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASSLQGK*QMLYFL
Trigger: TAGGAAGTAAAGCATTTGTCACTTTCCCTGCAGTGA...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCAGAGGAAACTGTGACTaGCATTCATTGCTACTCCAT +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASRGNCD*HSLLLH
Trigger: ATGGAGTAGCAATGAATGTCAGTCACAGTTTCCTCT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCAACAATCCGAGGCTTTaGAAATGTACAGGTGACGTG +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFNNPRL*KCTGDV
Trigger: CACGTCACCTGTACATTTTCAAAGCCTCGGATTGTT...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTAGGAAGGGAAAGGCCTaGAACTCTACAGTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGRKGKA*NSTVQF
Trigger: AAACTGAACTGTAGAGTTTCAGGCCTTTCCCTTCCT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTAAGTCCTGCTTCACCTaGAGCGCGAACAGGTACCTT +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFKSCFT*SANRYL
Trigger: AAGGTACCTGTTCGCGCTGCAGGTGAAGCAGGACTT...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCATTACACGTCAACCTaGCTTGAGCCAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIHYTST*LEPSPA
Trigger: AGCAGGACTTGGCTCAAGGCAGGTTGACGTGTAATG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGTCCCCAATCTCAGATTaGACAATGTGTGAAATCAAG +
Preference number: 4 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVSPISD*TMCEIK
Trigger: CTTGATTTCACACATTGTGCAATCTGAGATTGGGGA...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAACTGTCCTTGGCCGGGTaGAACCGGATTCCATACATC +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKLSLAG*NRIPYI
Trigger: GATGTATGGAATCCGGTTGCACCCGGCCAAGGACAG...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCGGAAAGGTGAGGACTaGCAGTCAGGGAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNRKGED*QSGSLC
Trigger: GCACAGGCTCCCTGACTGGCAGTCCTCACCTTTCCG...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACATCAAGGGAGAGGCCTaGTTGGTGTCGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNIKGEA*LVSGLR
Trigger: CCTGAGCCCCGACACCAAGCAGGCCTCTCCCTTGAT...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTGCATGGCGTCCTCTTTaGTCACTGTGCTCTGAAACC +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLAWRPL*SLCSET
Trigger: GGTTTCAGAGCACAGTGAGCAAAGAGGACGCCATGC...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTTCTTTCTTGAGTTCGTaGAGCTTCTGGAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMISFLSS*SFWKFS
Trigger: GGAGAATTTCCAGAAGCTGCACGAACTCAAGAAAGA...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACGGGCAGGTGCTATGGTaGGGGGCGCTGGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNGQVLW*GALERM
Trigger: CATTCTTTCCAGCGCCCCGCACCATAGCACCTGCCC...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGGTTTTATCCCTGCATTaGTCTTGTGAAGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRVLSLH*SCEVAG
Trigger: ACCAGCCACTTCACAAGAGCAATGCAGGGATAAAAC...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTTTTGCTGTGGGACCTTaGTTGGCGAGGGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLFAVGP*LARGKI
Trigger: GATTTTCCCCCTCGCCAAGCAAGGTCCCACAGCAAA...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGTTGTACCTCAACAAATaGAAATTTTCCCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQLYLNK*KFSPFA
Trigger: GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAA...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTCAGACACGTTGTTCCTaGTTTGGACCATATTTCGGA +
Preference number: 4 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLQTRCS*FGPYFG
Trigger: TCCGAAATATGGTCCAAAGCAGGAACAACGTGTCTG...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGACTTCCTGCCAGTTTTaGTCCAAACATGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQTSCQF*SKHVVS
Trigger: TGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGT...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp AATGAATCTTCCCCTAGTGGCAAACAACCCACAGCAGAAAAGCTGTATTGCTTCATGGGCCCCTCTGTATaGAGCTTCACGTATCTGAGA +
Preference number: 4 (lower is better)
Translates to: NESSPSGKQPTAEKLYCFMGPSV*SFTYLR
Trigger: TCTCAGATACGTGAAGCTGCATACAGAGGGGCCCAT...GAAGCAATACAGCTTTTCTGCTGTGGGTTGTTTGCCACTAGGGGAAGATTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR GCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTTTGGACTTGAACTGCTaGTGCTGGGAGACAATGGGG +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFLDLNC*CWETMG
Trigger: CCCCATTGTCTCCCAGCAGCAGCAGTTCAAGTCCAA...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCTATTTGGACTTGAACTaGTGCTGCTGGGAGACAATG +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFYLDLN*CCWETM
Trigger: CATTGTCTCCCAGCAGCAGCAGTTCAAGTCCAAATA...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAACCTATTTCAAGGTGTTaGTCTTCCCTGCATCCACAC +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQPISRC*SSLHPH
Trigger: GTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCAGAGGTGTGTACATGTaGTCACTAGAGACACCATTT +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASRGVYM*SLETPF
Trigger: AAATGGTGTCTCTAGTGAGCACATGTACACACCTCT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCTATGTGCCCAGAATATaGTCAAAAGGCCCAAGTAGG +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFYVPRI*SKGPSR
Trigger: CCTACTTGGGCCTTTTGAGCATATTCTGGGCACATA...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAATTGCAGTCTGTCACCTaGTTTGAAGGCACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKLQSVT*FEGTAP
Trigger: CGGGGCTGTGCCTTCAAAGCAGGTGACAGACTGCAA...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCAGCTTGTTTACACCTTaGAGTCTGTCACCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFSLFTP*SLSPAL
Trigger: CAAAGCAGGTGACAGACTGCAAGGTGTAAACAAGCT...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTTTCCATAAGAGAGCCTaGCTCGCCAAGAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVFHKRA*LAKKAC
Trigger: GCACGCCTTCTTGGCGAGGCAGGCTCTCTTATGGAA...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCCCAGGAGCTCTTTGTaGAACTTCAAATGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIPRSSL*NFKCLL
Trigger: CAGGAGGCATTTGAAGTTCCACAAAGAGCTCCTGGG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCACCCAGGAGCTCTTTGTaGAACTTCAAATGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPPRSSL*NFKCLL
Trigger: CAGGAGGCATTTGAAGTTCCACAAAGAGCTCCTGGG...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTTCCACGAGGTTGAGGTaGTTGCAAACTGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLSTRLR*LQTASS
Trigger: GCTGGATGCAGTTTGCAACCACCTCAACCTCGTGGA...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTCTTGGAGTTGTGTGTaGTCAGGCGGAAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYSWSCV*SGGKNF
Trigger: GAAATTCTTTCCGCCTGACCACACACAACTCCAAGA...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CAGATACTGAAAGTCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCATCAAGAGAGCTGCGCTaGTGTCATTACACGTCAACC +
Preference number: 4 (lower is better)
Translates to: QILKVPSCLLKITETQRSSRELR*CHYTST
Trigger: GGTTGACGTGTAATGACACCAGCGCAGCTCTCTTGA...TGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGACTTTCAGTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGGCAATCTCTAGGAGCTaGAAATCTGATTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRAISRS*KSDSAG
Trigger: ACCAGCAGAATCAGATTTCCAGCTCCTAGAGATTGC...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAAGGTCAATGGCCATCTaGATGTCCTCAACCCACTTC +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPRSMAI*MSSTHF
Trigger: GAAGTGGGTTGAGGACATCCAGATGGCCATTGACCT...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACGCGAGGCAGAGCTGGTaGCACTGCGGATCACTTCCA +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNARQSW*HCGSLP
Trigger: TGGAAGTGATCCGCAGTGCCACCAGCTCTGCCTCGC...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGGGAAGATGTCATTTaGCACTCTCGTAATGACAAT +
Preference number: 4 (lower is better)
Translates to: RPFASCCLFPATPVRAPQREDVI*HSRNDN
Trigger: ATTGTCATTACGAGAGTGCCAAATGACATCTTCCCT...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTACACCAAGAAGTAGGTTaGGAACAGGTGTTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLHQEVG*EQVFSG
Trigger: ACCTGAAAACACCTGTTCCCAACCTACTTCTTGGTG...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGCACCAAGAAGTAGGTTaGGAACAGGTGTTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRHQEVG*EQVFSG
Trigger: ACCTGAAAACACCTGTTCCCAACCTACTTCTTGGTG...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGCAATATGCTGGATTGTaGCGTGAGGTATTTTTATTC +
Preference number: 4 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLQYAGL*REVFLF
Trigger: GAATAAAAATACCTCACGCCACAATCCAGCATATTG...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GCTGGAATAGAAATGAATCTTCCCCTAGTGGCAAACAACCCACAGCAGAAAAGCGATGTGAATGGTGCTTaGGCTTCATGGAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: AGIEMNLPLVANNPQQKSDVNGA*ASWSIS
Trigger: TGAGATGCTCCATGAAGCCCAAGCACCATTCACATC...GCTTTTCTGCTGTGGGTTGTTTGCCACTAGGGGAAGATTCATTTCTATTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR CCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCATACTCCCCTCTCTATaGTCATGTCCATTTTCCGAA +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASILPSL*SCPFSE
Trigger: TTCGGAAAATGGACATGACCATAGAGAGGGGAGTAT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATATTAAGTTGCTTGCCTaGTACAAAGCCAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHIKLLA*YKASEG
Trigger: TCCCTCACTGGCTTTGTACCAGGCAAGCAACTTAAT...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTCCTTTCTTCCCGCTTTaGGATTGGGCACAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVPFFPL*DWAQAA
Trigger: GGCAGCTTGTGCCCAATCCCAAAGCGGGAAGAAAGG...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTCCGGTCTGGGGAAGCTaGGTTTGCAGCATCTTGATC +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVPVWGS*VCSILI
Trigger: GATCAAGATGCTGCAAACCCAGCTTCCCCAGACCGG...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp AAGGAACTGCTCTCTGGGGCATGTCAGATTTCGGATTaGGGGCTGCACACTGGTAAGTATAATGCGGATATT +
Preference number: 4 (lower is better)
Translates to: KELLSGACQISD*GLHTGKYNADI
Trigger: AATATCCGCATTATACTTACCAGTGTGCAGCCCCAAATCCGAAATCTGACATGCCCCAGAGAGCAGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 72 bp CTTTGTAATTTAAAACACGCTCATCATTCTTCCCTCTaGGCCGGTCTGGGGAAGCTGGGTTTGCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: LCNLKHAHHSSL*AGLGKLGLQHL
Trigger: AAGATGCTGCAAACCCAGCTTCCCCAGACCGGCCAAGAGGGAAGAATGATGAGCGTGTTTTAAATTACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCGAACAGGTACCTTGTaGGTTCTTCTTGGAGTTGTG +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIRTGTL*VLLGVV
Trigger: CACAACTCCAAGAAGAACTCACAAGGTACCTGTTCG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCACGAACAGGTACCTTGTaGGTTCTTCTTGGAGTTGTG +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPRTGTL*VLLGVV
Trigger: CACAACTCCAAGAAGAACTCACAAGGTACCTGTTCG...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTACCAATGTGGTTATGGTaGAATTCCACGATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLPMWLW*NSTILS
Trigger: GGACAAAATCGTGGAATTTCACCATAACCACATTGG...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATCCAATGTGGTTATGGTaGAATTCCACGATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHPMWLW*NSTILS
Trigger: GGACAAAATCGTGGAATTTCACCATAACCACATTGG...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAAGGCTCCGGATAGAATaGATCTTGCTGTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPRLRIE*ILLCFL
Trigger: AAGGAAGCACAGCAAGATTCATTCTATCCGGAGCCT...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTAGGCTCCGGATAGAATaGATCTTGCTGTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIRLRIE*ILLCFL
Trigger: AAGGAAGCACAGCAAGATTCATTCTATCCGGAGCCT...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATCAAAATTCGGGAATATaGGACTTTTCAGTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYQNSGI*DFSVLP
Trigger: CGGAAGCACTGAAAAGTCTCATATTCCCGAATTTTG...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGCAAAATTCGGGAATATaGGACTTTTCAGTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRQNSGI*DFSVLP
Trigger: CGGAAGCACTGAAAAGTCTCATATTCCCGAATTTTG...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAGGAAATTCTCCATCTTaGTCATCGTACCGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPGNSPS*SSYRGA
Trigger: AGCTCCACGGTACGATGATCAAGATGGAGAATTTCC...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGGGAAATTCTCCATCTTaGTCATCGTACCGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRGNSPS*SSYRGA
Trigger: AGCTCCACGGTACGATGATCAAGATGGAGAATTTCC...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTGGAAATTCTCCATCTTaGTCATCGTACCGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIGNSPS*SSYRGA
Trigger: AGCTCCACGGTACGATGATCAAGATGGAGAATTTCC...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGCAATCAAATCTTTCTTaGGTTCGTGCAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRQSNLS*VRAASG
Trigger: TCCAGAAGCTGCACGAACTCAAGAAAGATTTGATTG...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACTCTCCACTGCGATGCTaGAGTCCACCATGGAGACGC +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNSPLRC*SPPWRR
Trigger: GCGTCTCCATGGTGGACTTCAGCATCGCAGTGGAGA...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATATGATTGTCCTGGTGTaGTTTGTAGAAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYMIVLV*FVEEQA
Trigger: TGCCTGTTCTTCTACAAATCACACCAGGACAATCAT...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTATACCACAAATGGTGCTaGTCAATGACACACGGGTTT +
Preference number: 4 (lower is better)
Translates to: KMGFLPSHRECICIPGILYHKWC*SMTHGF
Trigger: AAACCCGTGTGTCATTGATCAGCACCATTTGTGGTA...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGCTAGATTGGAACGTTTaGGATAAGCCTGGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRLDWNV*DKPGQR
Trigger: TCTTTGACCAGGCTTATCTCAAACGTTCCAATCTAG...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GGCCCCTCTGTATGCAGCTTCACGTATCTGAGATCACATCTGTATCTACTCCTAATAGAGCCTGTAAGATaGGTGAGAATTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GPSVCSFTYLRSHLYLLLIEPVR*VRILSS
Trigger: AGAGGACAGAATTCTCACTCATCTTACAGGCTCTAT...TAGGAGTAGATACAGATGTGATCTCAGATACGTGAAGCTGCATACAGAGGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR TCA 90 bp GAGTGGATGGGCCCCTCTGTATGCAGCTTCACGTATCTGAGATCACATCTGTATTCACTTATTGGGCACTaGAATGTGTTAATGTCACCT +
Preference number: 4 (lower is better)
Translates to: EWMGPSVCSFTYLRSHLYSLIGH*NVLMSP
Trigger: AGGTGACATTAACACATTTCAGTGCCCAATAAGTGA...ATACAGATGTGATCTCAGATACGTGAAGCTGCATACAGAGGGGCCCATCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR TCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAACGCTCATATCAAAGGTaGTGTCTGCTGAATCGTCAT +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQRSYQR*CLLNRH
Trigger: ATGACGATTCAGCAGACATCACCTTTGATATGAGCG...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCAGGCATTTAGTTTGTTaGCCTACTGGTGACAACAGT +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGRHLVC*PTGDNS
Trigger: ACTGTTGTCACCAGTAGGTCAACAAACTAAATGCCT...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACAATCCAACAATCAGCTTaGTTCAATCAGGCACTGAAT +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTIQQSA*FNQALN
Trigger: ATTCAGTGCCTGATTGAATCAAGCTGATTGTTGGAT...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCAACCCTTTGGAAATCTaGATGCATTCAGAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASNPLEI*MHSEVC
Trigger: ACAGACTTCTGAATGCATTCAGATTTCCAAAGGGTT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCATTTGGTGGAAATTTTaGGAGGCTCGTGCTATGTTT +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASIWWKF*EARAMF
Trigger: AAACATAGCACGAGCCTCTCAAAATTTCCACCAAAT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCGCCAGCTATCAATCCTaGTTCATAATAAAGCAGACT +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASASYQS*FIIKQT
Trigger: AGTCTGCTTTATTATGAATCAGGATTGATAGCTGGC...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTTCAGTTTTGCTAATTTaGGCTGCATCTGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGSVLLI*AASVEK
Trigger: CTTCTCCACAGATGCAGCTCAAATTAGCAAAACTGA...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCCATTTCATGCATTTGTaGGTTGCTGTTGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFHFMHL*VAVGEL
Trigger: CAACTCTCCAACAGCAACTCACAAATGCATGAAATG...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCATTGTGGAACTTCAAATaGCTCCTGGGTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPLWNFK*LLGVIQ
Trigger: CTGGATGACACCCAGGAGGCATTTGAAGTTCCACAA...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATTTCATTACACGTCAACCTaGCTTGAGCCAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CVVCLKLHSDGLLPTLVFHYTST*LEPSPA
Trigger: AGCAGGACTTGGCTCAAGGCAGGTTGACGTGTAATG...AAATACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTTGAGACACACTACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGTGCTTCCTTTCAAACTaGACCTTCTTATGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRCFLSN*TFLCPP
Trigger: AGGAGGACATAAGAAGGTGCAGTTTGAAAGGAAGCA...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCTGCTTCCTTTCAAACTaGACCTTCTTATGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFCFLSN*TFLCPP
Trigger: AGGAGGACATAAGAAGGTGCAGTTTGAAAGGAAGCA...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATCACAGGGCAAGTCGTTaGTCAATTTCCTTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYHRASR*SISLRK
Trigger: TTTTCTCAAGGAAATTGAGCAACGACTTGCCCTGTG...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCAGAGCTGGTGGCACTaGGGATCACTTCCATCCACC +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNQSWWH*GSLPST
Trigger: GGTGGATGGAAGTGATCCGCAGTGCCACCAGCTCTG...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTGGCTCTTCGTCCGTTTaGAAGTTGCTGTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIGSSSV*KLLFVS
Trigger: GGAAACAAACAGCAACTTGCAAACGGACGAAGAGCC...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCGCCACTTCCAGGCCTaGATTAAGAGAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNRHFQA*IKREPR
Trigger: CCTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCG...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCTGTTTTTCTTGGTTTaGTGTGGGACCTTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGILFFLV*CGTLLG
Trigger: GCCAAGCAAGGTCCCACAGCAAACCAAGAAAAACAG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACGCTGATCTGTGCGATTaGTGTAGCGGTTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNADLCD*CSGCRG
Trigger: TCCCCGGCAACCGCTACAGCAATCGCACAGATCAGC...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTCCTTGTAGTGGATTCTaGATATCATCTTTCCCACCT +
Preference number: 4 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLPCSGF*ISSFPP
Trigger: AGGTGGGAAAGATGATATGCAGAATCCACTACAAGG...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTTTCGGATTTGGGGCTaGACACTGGTAAGTATAATG +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYFRIWG*TLVSIM
Trigger: CATTATACTTACCAGTGTGCAGCCCCAAATCCGAAA...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGGTTCTCTGGGAGAGATaGCAAGTATTTCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLVLWER*QVFQMP
Trigger: AGGCATTTGAAATACTTGGCATCTCTCCCAGAGAAC...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTGTTCACCCCGATGGCTaGCAAAACCACGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: YASLESYCVIMYGSMFTFVHPDG*QNHGGH
Trigger: ATGGCCACCGTGGTTTTGGCAGCCATCGGGGTGAAC...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATTGTTTTGCTCGGGGATaGTTACATTTGACGATTCCT +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHCFARG*LHLTIP
Trigger: AGGAATCGTCAAATGTAAGCATCCCCGAGCAAAACA...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCTTACACCAGGATTGCTaGTTTTGTGAATACTGGCCA +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFLHQDC*FCEYWP
Trigger: TGGCCAGTATTCACAAAAGCAGCAATCCTGGTGTAA...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCCTTAGTTCAACTTCATaGACACGCATGCCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFLSSTS*TRMPLL
Trigger: TAACAAGGGCATGCGTGTGCATGAAGTTGAACTAAG...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTGTTTCGAGGCTACCATaGTGTGATGTCTGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFVSRLP*CDVCVE
Trigger: CTCGACACAGACATCACAGCATGGTAGCCTCGAAAC...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTTCAACATTCTGCAATTaGTGCACCTGGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVSTFCN*CTWPQQ
Trigger: CTGCTGGGGCCAGGTGCAGCAATTGCAGAATGTTGA...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAATGGTCACCATGCCACTaGAGGCTCCTAAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKWSPCH*RLLSDP
Trigger: AGGGTCACTTAGGAGCCTGCAGTGGCATGGTGACCA...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAGGATTGGGCACAAGCTaGCTGTTAACCATGTACCGG +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKGLGTS*LLTMYR
Trigger: CCGGTACATGGTTAACAGGCAGCTTGTGCCCAATCC...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTGGTTTGGGTTTATGCTaGCCCCCTCAGACTGAAAAC +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFGLGLC*PPQTEN
Trigger: GTTTTCAGTCTGAGGGGGGCAGCATAAACCCAAACC...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAAGGCCCCTTCTCTCTTTaGAAGATAAACAATCCGAGG +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQGPFSL*KINNPR
Trigger: CCTCGGATTGTTTATCTTGCAAAGAGAGAAGGGGCC...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTTCAAGAGAGCTGCGCTaGTGTCATTACACGTCAACC +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLSRELR*CHYTST
Trigger: GGTTGACGTGTAATGACACCAGCGCAGCTCTCTTGA...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAAGCAATCTCTAGGAGCTaGAAATCTGATTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQAISRS*KSDSAG
Trigger: ACCAGCAGAATCAGATTTCCAGCTCCTAGAGATTGC...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCATCCTCTTCCTCATGCAATCTCTAGGAGCTaGAAATCTGATTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLPASLKSLKRNVHPLPHAISRS*KSDSAG
Trigger: ACCAGCAGAATCAGATTTCCAGCTCCTAGAGATTGC...ATGAGGAAGAGGATGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCGCACTATTGGCATCTaGCCGGAGCTTGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFRTIGI*PELDEK
Trigger: TTTCTCATCAAGCTCCGGCCAGATGCCAATAGTGCG...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATAATTCCAAGGTATCCTaGTACGCACTATTGGCATCT +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYNSKVS*YALLAS
Trigger: AGATGCCAATAGTGCGTACCAGGATACCTTGGAATT...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTTGTCACTCTGAACACTaGGGCTTTAGAAACCCTTGC +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGICHSEH*GFRNPC
Trigger: GCAAGGGTTTCTAAAGCCCCAGTGTTCAGAGTGACA...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp CAGATACTGAAAGTCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCACAGGAAATTGGCATCTaGCCGGAGCTTGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: QILKVPSCLLKITETQRSQEIGI*PELDEK
Trigger: TTTCTCATCAAGCTCCGGCCAGATGCCAATTTCCTG...TGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGACTTTCAGTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTAGATTCGAGACAGCCTaGGTAAGAAGTGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALRFETA*VRSDPG
Trigger: GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCT...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCTCTCAGGAAACCCTTTaGAAATCTGAATGCATTCAG +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASSQETL*KSECIQ
Trigger: CTGAATGCATTCAGATTTCCAAAGGGTTTCCTGAGA...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATTTAAATCCCAACAACTaGGAGAGGTGTGTACATGTG +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHLNPNN*ERCVHV
Trigger: CACATGTACACACCTCTCCCAGTTGTTGGGATTTAA...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTGCAGAAACAGGAGTATaGGTAAGGGATTTATCCATC +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGAETGV*VRDLSI
Trigger: GATGGATAAATCCCTTACCCATACTCCTGTTTCTGC...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTAGGCAAATCCATGGTTaGCTGTCTAGGCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFRQIHG*LSRLSM
Trigger: CATGGAGAGCCTAGACAGCCAACCATGGATTTGCCT...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCAGCATTCTTCCCAGTaGTATGAGTCCATGCTTTAT +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGQHSSQ*YESMLY
Trigger: ATAAAGCATGGACTCATACCACTGGGAAGAATGCTG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAACAAGCTCATTGTTACTaGAGAAGCCAGCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQQAHCY*RSQHSS
Trigger: GGAAGAATGCTGGCTTCTCCAGTAACAATGAGCTTG...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATAGCTTCAGCCATCAGTaGGAAAGAACAGTTACAATG +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHSFSHQ*ERTVTM
Trigger: CATTGTAACTGTTCTTTCCCACTGATGGCTGAAGCT...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATGACTTTGCAGTGACGTaGAACAGAAAAAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHDFAVT*NRKSIH
Trigger: GTGAATGCTTTTTCTGTTCCACGTCACTGCAAAGTC...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp GGTGCACTGGCCACTTCTTGCTGGGTTCTGATTTTCTaGGAAGTGCATCTGCCTTCCTTATCCAATAGTTTT +
Preference number: 4 (lower is better)
Translates to: GALATSCWVLIF*EVHLPSLSNSF
Trigger: AAAACTATTGGATAAGGAAGGCAGATGCACTTCCAAGAAAATCAGAACCCAGCAAGAAGTGGCCAGTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 72 bp TACGAAAATCCCGAGAGACATCTTTGTGCAGACACGTaGTTCCTGCTTTGGACCATATTTCGGAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: YENPERHLCADT*FLLWTIFRKQF
Trigger: GAACTGCTTCCGAAATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTTCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 72 bp AAAGACATCCTCAGCCATCTCTCCTGGACCTGTGATTaGGAGTCTGTTGTAAAATGGTTGAGGGAATTGTGG +
Preference number: 4 (lower is better)
Translates to: KDILSHLSWTCD*ESVVKWLRELW
Trigger: CCACAATTCCCTCAACCATTTTACAACAGACTCCAAATCACAGGTCCAGGAGAGATGGCTGAGGATGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 72 bp CAGGAGACCCCTACACTAGCTATTGTCCTAGAAAGATaGGTTGAGAGGTCTCAGGAAACCCTTTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: QETPTLAIVLER*VERSQETLWKS
Trigger: AGATTTCCAAAGGGTTTCCTGAGACCTCTCAACCAATCTTTCTAGGACAATAGCTAGTGTAGGGGTCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp CAAGGATATACCCAAACAGCTAGCACCAGGCCACTTTaGATCTGTGATGTCTACAACTCCAGGCCAAATCAT +
Preference number: 4 (lower is better)
Translates to: QGYTQTASTRPL*ICDVYNSRPNH
Trigger: ATGATTTGGCCTGGAGTTGTAGACATCACAGATCAAAAGTGGCCTGGTGCTAGCTGTTTGGGTATATCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp CCCATGCACTGCCCAAAGTATAAAGTGCAAGCCTTGTaGGAAGAGCAAAGTTCACCTCTTCTTTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: PMHCPKYKVQAL*EEQSSPLLFPL
Trigger: AAGTGGGAAAAGAAGAGGTGAACTTTGCTCTTCCAACAAGGCTTGCACTTTATACTTTGGGCAGTGCATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp TCTCCCATGCACTGCCCAAAGTATAAAGTGCAAGCCTaGTTGGAAGAGCAAAGTTCACCTCTTCTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SPMHCPKYKVQA*LEEQSSPLLFP
Trigger: TGGGAAAAGAAGAGGTGAACTTTGCTCTTCCAACAAGGCTTGCACTTTATACTTTGGGCAGTGCATGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAAGATTGCACAATGTGTaGAATCAAGAGAGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPRLHNV*NQESCA
Trigger: AGCGCAGCTCTCTTGATTTCACACATTGTGCAATCT...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAACAGTTCTGTAGGCTGTaGAGCAAGGCTCCGGATAGA +
Preference number: 4 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKQFCRL*SKAPDR
Trigger: TCTATCCGGAGCCTTGCTTCACAGCCTACAGAACTG...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAGAATGTTCTTCAGCATaGCATCGCCGATTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPECSSA*HRRFFG
Trigger: ACCAAAGAATCGGCGATGTCATGCTGAAGAACATTC...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAGGGTTTTCATGCTTGTaGCACAGACAGACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPGFSCL*HRQTAK
Trigger: TTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCC...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAAATGGTGCTGATCAATaGCACACGGGTTTTCATGCT +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPNGADQ*HTGFHA
Trigger: AGCATGAAAACCCGTGTGTCATTGATCAGCACCATT...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTAGGTACACCTAGAGGTTaGTTTCCTTTTTCATCGATG +
Preference number: 4 (lower is better)
Translates to: KMGFLPSHRECICIPGILGTPRG*FPFSSM
Trigger: CATCGATGAAAAAGGAAATCAACCTCTAGGTGTACC...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTGGCTGCCCAGACGGATaGACTCCTTTACTAATAACA +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLGCPDG*TPLLIT
Trigger: TGTTATTAGTAAAGGAGTTCATCCGTCTGGGCAGCC...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTACTCATATTTGGACTTaGACTGCTGCTGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFTHIWT*TAAAGR
Trigger: TCTCCCAGCAGCAGCAGTTCAAGTCCAAATATGAGT...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAATTGCCTAAGTCTACTTaGTCACTAGTCTCCACATCC +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQLPKST*SLVSTS
Trigger: GGATGTGGAGACTAGTGATCAAGTAGACTTAGGCAA...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATAAACAAAATAATGATTaGAGCGTGTTTTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHKQNND*SVFCSG
Trigger: CCCCGAGCAAAACACGCTTCAATCATTATTTTGTTT...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTGCCACTTTTGATCTGTaGTGTCTACAACTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALATFDL*CLQLQA
Trigger: GGCCTGGAGTTGTAGACATCACAGATCAAAAGTGGC...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATGGTTACTCTAGGAAATaGCAAAGTTGCCCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHGYSRK*QSCPFQ
Trigger: TTGAAAAGGGCAACTTTGTCATTTCCTAGAGTAACC...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAACAAATCAGAGTAACCTaGTCTGGAGACTACATGAAG +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQQIRVT*SGDYMK
Trigger: CTTCATGTAGTCTCCAGATCAGGTTACTCTGATTTG...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAACCAGACAGCATCTGTaGGAACCTACATGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKTRQHL*EPTCWV
Trigger: CACCCAACATGTAGGTTCTCACAGATGCTGTCTGGT...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTGTGTGGTCCTCTTCTTaGTACCTGAGGTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALVWSSS*YLRLLR
Trigger: CCTCAACAACCTCAGGTATCAAGAAGAGGACCACAC...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAAACCTTGACTTTGCAGTaGCGTGGAACAGAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQTLTLQ*RGTEKA
Trigger: TGCTTTTTCTGTTCCACGTCACTGCAAAGTCAAGGT...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTCCTGGGGTCGGCCTCTaGTCTATTTCTCCCATGATG +
Preference number: 4 (lower is better)
Translates to: YASLESYCVIMYGSMFTFPGVGL*SISPMM
Trigger: CATCATGGGAGAAATAGAGCAGAGGCCGACCCCAGG...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGTCCCCAATCTCAGATTaGACAATGTGTGAAATCAAG +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRSPISD*TMCEIK
Trigger: CTTGATTTCACACATTGTGCAATCTGAGATTGGGGA...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTCCCCAATCTCAGATTaGACAATGTGTGAAATCAAG +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYSPISD*TMCEIK
Trigger: CTTGATTTCACACATTGTGCAATCTGAGATTGGGGA...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGCAGTGGAACGCTGTGTaGTGCAAATTGCTTATTAAT +
Preference number: 4 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLQWNAV*CKLLIN
Trigger: ATTAATAAGCAATTTGCAGCACACAGCGTTCCACTG...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTACAGTGGAACGCTGTGTaGTGCAAATTGCTTATTAAT +
Preference number: 4 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLQWNAV*CKLLIN
Trigger: ATTAATAAGCAATTTGCAGCACACAGCGTTCCACTG...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGCGTCCGTTTGCAAGTTaGTGTTTGTTTCCAGCTACA +
Preference number: 4 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRRPFAS*CLFPAT
Trigger: TGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCAAAGACATCAGACAGTaGTCCAACAGTGTAAGAACA +
Preference number: 4 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFKDIRQ*SNSVRT
Trigger: TGTTCTTACACTGTTGGAGCACTGTCTGATGTCTTT...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAGAGCTTGGCCTTCCATaGTCAAAGAACCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKELGLP*SKNHQA
Trigger: AGCTTGGTGGTTCTTTGAGCATGGAAGGCCAAGCTC...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTGAACAATCCCCACTGTaGTACAGAGGAGACAGGACT +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALEQSPL*YRGDRT
Trigger: AGTCCTGTCTCCTCTGTAGCACAGTGGGGATTGTTC...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAAGCACCCTTGCTGCACTaGACCTGGGAACACACATTT +
Preference number: 4 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKAPLLH*TWEHTF
Trigger: AAATGTGTGTTCCCAGGTGCAGTGCAGCAAGGGTGC...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTAGAGAGGAAAAGAACTaGCACTCGGGGCAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALREEKN*HSGQGK
Trigger: TTTCCCTTGCCCCGAGTGGCAGTTCTTTTCCTCTCT...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAATCCACGAGGTTGAGGTaGTTGCAAACTGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKSTRLR*LQTASS
Trigger: GCTGGATGCAGTTTGCAACCACCTCAACCTCGTGGA...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTAAACAACAACGTGCTTTaGCCTTCTAATCTGTTTCAC +
Preference number: 4 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLNNNVL*PSNLFH
Trigger: GTGAAACAGATTAGAAGGCCAAAGCACGTTGTTGTT...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTAAGGGAAGATGTCATTTaGCACTCTCGTAATGACAAT +
Preference number: 4 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLREDVI*HSRNDN
Trigger: ATTGTCATTACGAGAGTGCCAAATGACATCTTCCCT...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGCCACTTAAAACGATTTaGTCAACTTGCACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRPLKTI*STCTKK
Trigger: CTTCTTGGTGCAAGTTGACCAAATCGTTTTAAGTGG...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCCTGATGCTGCTGTGTaGCCCGGAGCTGTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNPDAAV*PGAVCL
Trigger: CAAACAAACAGCTCCGGGCCACACAGCAGCATCAGG...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp AAAATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTGCTTTGGACCATATCTGGCCACTTCTTGCTaGGTTCTGATTTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KIPRDIFVQTRCSCFGPYLATSC*VLIFLE
Trigger: TTCCAAGAAAATCAGAACCCAGCAAGAAGTGGCCAG...ATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAAGGGAGTATTCTGTGTaGGGAACTGTTTCCTTACGT +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPREYSV*GTVSLR
Trigger: ACGTAAGGAAACAGTTCCCCACACAGAATACTCCCT...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp ACTTATTGGGCACTGAAATGTGTTAATGTCACCTTTGAATTTAACTCTGGCCATCCGTTTAGGAGTGGATaGGCCCCTCTGTATGCAGCT +
Preference number: 4 (lower is better)
Translates to: TYWALKCVNVTFEFNSGHPFRSG*APLYAA
Trigger: AGCTGCATACAGAGGGGCCCATCCACTCCTAAACGG...ATGGCCAGAGTTAAATTCAAAGGTGACATTAACACATTTCAGTGCCCAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR CCA 90 bp GGCCCCTCTGTATGCAGCTTCACGTATCTGAGATCACATCTGTATCTACTCCTACCAAATCCCTCTCTTTaGTCTAATTTATGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GPSVCSFTYLRSHLYLLLPNPSL*SNLWLE
Trigger: TTCCAGCCATAAATTAGACCAAAGAGAGGGATTTGG...TAGGAGTAGATACAGATGTGATCTCAGATACGTGAAGCTGCATACAGAGGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR CCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTGCAGATAGACACCGCTaGTCAGATCACCCTCATAAT +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFADRHR*SDHPHN
Trigger: ATTATGAGGGTGATCTGACCAGCGGTGTCTATCTGC...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACAACATTCAGAGCAGACTaGATTTTGTATATTTGGTGG +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTTFRAD*ILYIWW
Trigger: CCACCAAATATACAAAATCCAGTCTGCTCTGAATGT...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAACATCTCACTCAAAAGTaGAGTCAATCACTGTCCGAT +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQHLTQK*SQSLSD
Trigger: ATCGGACAGTGATTGACTCCACTTTTGAGTGAGATG...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAAAAGGAGTCGTTAGCTTaGTTTCAAGAGCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQKESLA*FQEPEK
Trigger: CTTTTCTGGCTCTTGAAACCAAGCTAACGACTCCTT...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCTATTTTGCAATCTTCTaGGTGCCACTTATCTACCAT +
Preference number: 4 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASYFAIF*VPLIYH
Trigger: ATGGTAGATAAGTGGCACCCAGAAGATTGCAAAATA...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp AACCGACTTCTGGACATTCATGTGGACAGATATCATTaGTCAATGAGACGAGCCGATCCTCCTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: NRLLDIHVDRYH*SMRRADPPPFS
Trigger: AGAAAATGGAGGAGGATCGGCTCGTCTCATTGACAAATGATATCTGTCCACATGAATGTCCAGAAGTCGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp GGAACATGGTGCTTCGTACCAATGAAAAATACCATCTaGTACTCAGGACAAAGCTTCAGCCATCAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GTWCFVPMKNTI*YSGQSFSHQWE
Trigger: TTCCCACTGATGGCTGAAGCTTTGTCCTGAGTACAAGATGGTATTTTTCATTGGTACGAAGCACCATGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AAAACCCAGATACTGAAAGTCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAAAGATTGCACAATGTGTaGAATCAAGAGAGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: KTQILKVPSCLLKITETQRLHNV*NQESCA
Trigger: AGCGCAGCTCTCTTGATTTCACACATTGTGCAATCT...TTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGACTTTCAGTATCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR TCA 90 bp AAAATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTGCTTTGGACCATATCCAATGTGGTTATGGTaGAATTCCACGATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: KIPRDIFVQTRCSCFGPYPMWLW*NSTILS
Trigger: GGACAAAATCGTGGAATTTCACCATAACCACATTGG...ATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGAGTCTAAAGAAGGCATaGTGTTCAACACAGATTTTC +
Preference number: 4 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLSLKKA*CSTQIF
Trigger: GAAAATCTGTGTTGAACATCATGCCTTCTTTAGACT...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAAGGCTCCGGATAGAATaGATCTTGCTGTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKRLRIE*ILLCFL
Trigger: AAGGAAGCACAGCAAGATTCATTCTATCCGGAGCCT...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTCATCAACTCATCCCGTaGTTTAGTCATTTGTATTTC +
Preference number: 4 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLHQLIP*FSHLYF
Trigger: GAAATACAAATGACTAAATCACGGGATGAGTTGATG...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAATTGTTGACCTACTGGTaGCAACAGTGCCTATTTCAA +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQLLTYW*QQCLFQ
Trigger: TTGAAATAGGCACTGTTGTCACCAGTAGGTCAACAA...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTGGGGATGCTTACATTTaGCGATTCCTGTCATACGCT +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVGDAYI*RFLSYA
Trigger: AGCGTATGACAGGAATCGTCAAATGTAAGCATCCCC...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTCCTAGAAAGATTGGTTaGGAGGTCTCAGGAAACCCT +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVPRKIG*EVSGNP
Trigger: AGGGTTTCCTGAGACCTCTCAACCAATCTTTCTAGG...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTGCACTAATGGAAAAATaGATGTGCTACCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: QDATPALLIGPKKERAMGALMEK*MCYLVL
Trigger: AAGAACAAGGTAGCACATTCATTTTTCCATTAGTGC...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAATTCATTGCTACTCCATaGAATTATCAATGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQFIATP*NYQCLG
Trigger: ACCGAGGCATTGATAATTTCATGGAGTAGCAATGAA...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATAACTTAACAACAACGTaGTTTGGCCTTCTAATCTGT +
Preference number: 4 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYNLTTT*FGLLIC
Trigger: ACAGATTAGAAGGCCAAAGCACGTTGTTGTTAAGTT...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCATCCTCTTCCTCATTCCCCAATCTCAGATTaGACAATGTGTGAAATCAAG +
Preference number: 4 (lower is better)
Translates to: SLPASLKSLKRNVHPLPHSPISD*TMCEIK
Trigger: CTTGATTTCACACATTGTGCAATCTGAGATTGGGGA...ATGAGGAAGAGGATGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR GCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAACATTTTCTATGCTGCTaGCAAATTCTACTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQHFLCC*QILLSV
Trigger: GACACTGAGTAGAATTTGGCAGCAGCATAGAAAATG...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCATTATGGCCTGTAATTaGCTAAGTCTACTTGATCAC +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGIMACN*LSLLDH
Trigger: GTGATCAAGTAGACTTAGGCAATTACAGGCCATAAT...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACAGTGACTGACATTCATTaGTACTCCATGAAATTATCA +
Preference number: 4 (lower is better)
Translates to: VHQPRATMLENSPSLRCTVTDIH*YSMKLS
Trigger: TGATAATTTCATGGAGTAGCAATGAATGTCAGTCAC...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAATTAATATGTGCGCTCTaGAGACTTGGAACGACAAAA +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQLICAL*RLGTTK
Trigger: TTTTGTCGTTCCAAGTCTGCAGAGCGCACATATTAA...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAACAACTACTTAATATGTaGGCTCTGCAGACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQQLLNM*ALQTWN
Trigger: GTTCCAAGTCTGCAGAGCGCACATATTAAGTAGTTG...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATCATGCATTTGTGAGTTaGTGTTGGAGAGTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHHAFVS*CWRVVF
Trigger: AAAAACAACTCTCCAACAGCAACTCACAAATGCATG...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACTTGATCATCGTACCGTaGAGCTGTGCCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNLIIVP*SCATIS
Trigger: GGAGATGGTGGCACAGCTCCACGGTACGATGATCAA...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAAGTTCGTGCAGCTTCTaGAAATTCTCCATCTTGATC +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPSSCSF*KFSILI
Trigger: GATCAAGATGGAGAATTTCCAGAAGCTGCACGAACT...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTAGTTCGTGCAGCTTCTaGAAATTCTCCATCTTGATC +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGISSCSF*KFSILI
Trigger: GATCAAGATGGAGAATTTCCAGAAGCTGCACGAACT...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACTCTCCGCCAGGTCAATaGCCATCTGGATGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNSPPGQ*PSGCPQ
Trigger: TTGAGGACATCCAGATGGCCATTGACCTGGCGGAGA...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCACAACCCTGCTACGGTTaGAAAGAGTTACCACTTAAA +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPQPCYG*KELPLK
Trigger: TTTAAGTGGTAACTCTTTCCAACCGTAGCAGGGTTG...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACAGAATGGGGTTGAATTaGCCCTCGCCTCCGCTTGTT +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNRMGLN*PSPPLV
Trigger: AACAAGCGGAGGCGAGGGCCAATTCAACCCCATTCT...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGCAATATGCTGGATTGTaGCGTGAGGTATTTTTATTC +
Preference number: 4 (lower is better)
Translates to: RNDNVLILALAKEQRPQRQYAGL*REVFLF
Trigger: GAATAAAAATACCTCACGCCACAATCCAGCATATTG...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTCTGCCAAAACCACGGTaGCCATGGCTTAGACTTCCT +
Preference number: 4 (lower is better)
Translates to: YASLESYCVIMYGSMFTFLPKPR*PWLRLP
Trigger: AGGAAGTCTAAGCCATGGCCACCGTGGTTTTGGCAG...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAATCACTTCATGAGGCATaGACAAAGCAGCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKSLHEA*TKQPSF
Trigger: AAAGGAGGGCTGCTTTGTCCATGCCTCATGAAGTGA...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTGCCACATGGCACAATTaGGGGGAGATAAATCAGAAA +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFATWHN*GEINQK
Trigger: TTTCTGATTTATCTCCCCCCAATTGTGCCATGTGGC...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCGTTAACCTTTTAGACTaGCTTTCAACTACTCATGGA +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGVNLLD*LSTTHG
Trigger: TCCATGAGTAGTTGAAAGCCAGTCTAAAAGGTTAAC...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAACAAGCTGGTGAGGTTTaGTTAGTTAGGTTTTCACAG +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQQAGEV*LVRFSQ
Trigger: CTGTGAAAACCTAACTAACCAAACCTCACCAGCTTG...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATATGTACACATTCTCATaGCACAAACAATTACGGAAC +
Preference number: 4 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHMYTFS*HKQLRN
Trigger: GTTCCGTAATTGTTTGTGCCATGAGAATGTGTACAT...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTATTAGGGTGGTCAGTTaGCCTTTTCCCAAGACGCTA +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVIRVVS*PFPKTL
Trigger: TAGCGTCTTGGGAAAAGGCCAACTGACCACCCTAAT...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTTGCGCTCTGCAGACTTaGAACGACAAAATTAGGGTG +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALCALQT*NDKIRV
Trigger: CACCCTAATTTTGTCGTTCCAAGTCTGCAGAGCGCA...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp ACTGTAGCCCAAATCTCATCAGCATCTTTGGGTGCATaGCCTTCTGTTGTCATACCAGGTCATAAACTTACT +
Preference number: 4 (lower is better)
Translates to: TVAQISSASLGA*PSVVIPGHKLT
Trigger: AGTAAGTTTATGACCTGGTATGACAACAGAAGGCAATGCACCCAAAGATGCTGATGAGATTTGGGCTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 72 bp GCCTTCAACCAGCAAAATAAACAAGCTCCTGAGAACTaGTCATTAGGACTTGCTGTTTATCTTGCCCACCTT +
Preference number: 4 (lower is better)
Translates to: AFNQQNKQAPEN*SLGLAVYLAHL
Trigger: AAGGTGGGCAAGATAAACAGCAAGTCCTAATGACAAGTTCTCAGGAGCTTGTTTATTTTGCTGGTTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp ATGATTGAAGCGTGTTTTGCTCGGGGATGCTTACATTaGACGATTCCTGTCATACGCTGTGTAAGTTCATAC +
Preference number: 4 (lower is better)
Translates to: MIEACFARGCLH*TIPVIRCVSSY
Trigger: GTATGAACTTACACAGCGTATGACAGGAATCGTCAAATGTAAGCATCCCCGAGCAAAACACGCTTCAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp GATATATTAATACCGTGCATACACTGTGACATGAGCTaGGCCTTCCATGCTCAAAGAACCACCAAGCTCATT +
Preference number: 4 (lower is better)
Translates to: DILIPCIHCDMS*AFHAQRTTKLI
Trigger: AATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAAGCTCATGTCACAGTGTATGCACGGTATTAATATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp TATAGGATTACCCATGTTAGCAGTGTGGTCCTCTTCTaGATACCTGAGGTTGTTGAGGGTAATGTATGTGTG +
Preference number: 4 (lower is better)
Translates to: YRITHVSSVVLF*IPEVVEGNVCV
Trigger: CACACATACATTACCCTCAACAACCTCAGGTATCAAGAAGAGGACCACACTGCTAACATGGGTAATCCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAACGAACAGGTACCTTGTaGGTTCTTCTTGGAGTTGTG +
Preference number: 4 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKRTGTL*VLLGVV
Trigger: CACAACTCCAAGAAGAACTCACAAGGTACCTGTTCG...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp AACAAAACCCAGATACTGAAAGTCCCTTCCTGCCTCCTTAAAATCACTGAAACGCCAATGTGGTTATGGTaGAATTCCACGATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: NKTQILKVPSCLLKITETPMWLW*NSTILS
Trigger: GGACAAAATCGTGGAATTTCACCATAACCACATTGG...CGTTTCAGTGATTTTAAGGAGGCAGGAAGGGACTTTCAGTATCTGGGTTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR TCA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTTGCTGGATTGTGGCGTaGGGTATTTTTATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLCWIVA*GIFIPF
Trigger: AAAGGGAATAAAAATACCTCACGCCACAATCCAGCA...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTCCCTTTGTTGTCTTCTaGAGACAATCTTGTAGAATT +
Preference number: 4 (lower is better)
Translates to: TGNRLVHLVRQMINTRQAPFVVF*RQSCRI
Trigger: AATTCTACAAGATTGTCTTCAGAAGACAACAAAGGG...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTAAAGGTGATGTCTGCTaGATCGTCATCAAGGAATTC +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFKGDVC*IVIKEF
Trigger: GAATTCCTTGATGACGATTCAGCAGACATCACCTTT...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAACATTCACCTCATCATTaGAAGAGTTGGAGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKHSPHH*KSWSRE
Trigger: TTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATG...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAATTGTGGAACTTCAAATaGCTCCTGGGTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKLWNFK*LLGVIQ
Trigger: CTGGATGACACCCAGGAGGCATTTGAAGTTCCACAA...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCATGGAACGCTGTGTGCTaGAAATTGCTTATTAATCAG +
Preference number: 4 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPWNAVC*KLLINQ
Trigger: CTGATTAATAAGCAATTTGCAGCACACAGCGTTCCA...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTTGGAACGCTGTGTGCTaGAAATTGCTTATTAATCAG +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIWNAVC*KLLINQ
Trigger: CTGATTAATAAGCAATTTGCAGCACACAGCGTTCCA...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCCCTCACATCGGGAATaGATATGCATCCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNPSHRE*ICIPGI
Trigger: GATTCCAGGGATGCATATGCATTCCCGATGTGAGGG...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAGCCAAGTATTTCAAATaGCTGAAAAGAGGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPAKYFK*LKRGAL
Trigger: TAGAGCTCCTCTTTTCAGGCATTTGAAATACTTGGC...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTAACCAAGAGCAACCATaGTGGAAAACAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALNQEQP*WKTVLL
Trigger: GAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTT...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAAAACAGAGAGCTGTGTaGACACTCATGGCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKKQRAV*TLMAVS
Trigger: TGAAACTGCCATGAGTGTGCACACAGCTCTCTGTTT...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTACAGAAGCTACACCATaGTTTGAGGGTAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFTEATP*FEGKDR
Trigger: TCTGTCTTTACCCTCAAAGCATGGTGTAGCTTCTGT...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAACCTTCTCCCATGCACTaGCCAAAGTATAAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKPSPMH*PKYKVQ
Trigger: TTGCACTTTATACTTTGGGCAGTGCATGGGAGAAGG...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTAGGGTAATGTATGTGTaGTTCTTAGACCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFRVMYV*FLDPVP
Trigger: AGGAACTGGGTCTAAGAAGCACACATACATTACCCT...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACACTTCAAATGCCTCCTaGGTGTCATCCAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNTSNAS*VSSSIW
Trigger: CCAGATGCTGGATGACACCCAGGAGGCATTTGAAGT...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCCACTTAAAACGATTTaGTCAACTTGCACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIPLKTI*STCTKK
Trigger: CTTCTTGGTGCAAGTTGACCAAATCGTTTTAAGTGG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp AACAAAACCCAGATACTGAAAGTCCCTTCCTGCCTCCTTAAAATCACTGAAACGACTTCGTGTCAATGTTaGCTCTTACGTCGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NKTQILKVPSCLLKITETTSCQC*LLRRFS
Trigger: AGAGAAACGACGTAAGAGCCAACATTGACACGAAGT...CGTTTCAGTGATTTTAAGGAGGCAGGAAGGGACTTTCAGTATCTGGGTTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CCA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCTCCCAAACACACATATaGCACAATAAATCAGCATTT +
Preference number: 4 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGSQTHI*HNKSAF
Trigger: AAATGCTGATTTATTGTGCCATATGTGTGTTTGGGA...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp CTAATGTGTGCTTTTGGGAGGACCTTATGTAACCATTaGTTCTCTGGGAGAGATGCCAAGTATTTCAAATGC +
Preference number: 4 (lower is better)
Translates to: LMCAFGRTLCNH*FSGRDAKYFKC
Trigger: GCATTTGAAATACTTGGCATCTCTCCCAGAGAACAAATGGTTACATAAGGTCCTCCCAAAAGCACACATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 72 bp GCAAAGTCACTTAACTTTTTCAGAAGAAATGAAGGTTaGCCCAGAAGAACCTCTGAGGTCCCTTCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: AKSLNFFRRNEG*PRRTSEVPSSL
Trigger: TAAACTGGAAGGGACCTCAGAGGTTCTTCTGGGCAAACCTTCATTTCTTCTGAAAAAGTTAAGTGACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp GAACACTACACATACATGGCTAGGGTTCAAAGAAACTaGCTCTGTTACAGGGATTACCTAGAAAGACTCTTC +
Preference number: 4 (lower is better)
Translates to: EHYTYMARVQRN*LCYRDYLERLF
Trigger: GAAGAGTCTTTCTAGGTAATCCCTGTAACAGAGCAAGTTTCTTTGAACCCTAGCCATGTATGTGTAGTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAAGTCTAAAGAAGGCATaGTGTTCAACACAGATTTTC +
Preference number: 4 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPSLKKA*CSTQIF
Trigger: GAAAATCTGTGTTGAACATCATGCCTTCTTTAGACT...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR TCA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAAGAGGGAAAAACTCTATaGGCAACTCTTAAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQEGKTL*ATLKVK
Trigger: TTTCACTTTAAGAGTTGCTCATAGAGTTTTTCCCTC...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTGTAAAGACAGAACGCTaGAAACAAAGCGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALVKTER*KQSVFS
Trigger: GGAGAAAACGCTTTGTTTTCAGCGTTCTGTCTTTAC...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTGGTGCTTCGTACCAATaGAAAATACCATCTTGTACT +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFGASYQ*KIPSCT
Trigger: AGTACAAGATGGTATTTTTCATTGGTACGAAGCACC...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTAGGGCAGTATTATGCTaGATAATACGTAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVRAVLC*IIRSFL
Trigger: CAGGAAGCTACGTATTATTCAGCATAATACTGCCCT...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTAATAGATTCTTGGACTaGATCACTATTTTTATGGCC +
Preference number: 4 (lower is better)
Translates to: TGNRLVHLVRQMINTRQANRFLD*ITIFMA
Trigger: GGCCATAAAAATAGTGATGCAGTCCAAGAATCTATT...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAGGGTTCAAAGAAACTTaGTCTGTTACAGGGATTACC +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKGFKET*SVTGIT
Trigger: GGTAATCCCTGTAACAGAGCAAGTTTCTTTGAACCC...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTGGGTTGGGAACATGGTaGTTCGTACCAATGAAAAAT +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALGLGTW*FVPMKN
Trigger: ATTTTTCATTGGTACGAAGCACCATGTTCCCAACCC...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTAACAACAACGTGCTTTaGCCTTCTAATCTGTTTCAC +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFNNNVL*PSNLFH
Trigger: GTGAAACAGATTAGAAGGCCAAAGCACGTTGTTGTT...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTAATTCCAAGGTATCCTaGTACGCACTATTGGCATCT +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALNSKVS*YALLAS
Trigger: AGATGCCAATAGTGCGTACCAGGATACCTTGGAATT...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTGTCCAGGTATTGCACTaGATCTCGGCTTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: YASLESYCVIMYGSMFTFVQVLH*ISALLN
Trigger: GTTAAGCAAAGCCGAGATCCAGTGCAATACCTGGAC...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAACAGGATTCCACACTTaGCTCTGTTTAACTCACACT +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKTGFHT*LCLTHT
Trigger: AGTGTGAGTTAAACAGAGCCAAGTGTGGAATCCTGT...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTCACTTTAGTGAAATATaGCATCACCCAGGACGATCA +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVHFSEI*HHPGRS
Trigger: TGATCGTCCTGGGTGATGCCATATTTCACTAAAGTG...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTTTCATTGTTCCGCCATaGAGAGAAGAAGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALFIVPP*REEETR
Trigger: TCTGGTTTCTTCTTCTCTCCATGGCGGAACAATGAA...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTTTTGGGTTGGGAACATaGTGCTTCGTACCAATGAAA +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALFGLGT*CFVPMK
Trigger: TTTCATTGGTACGAAGCACCATGTTCCCAACCCAAA...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAATGGAATACGCAAAGCTaGCGGTATTTTATAGAAATT +
Preference number: 4 (lower is better)
Translates to: SNLIWRLHEDANALPPLQWNTQS*RYFIEI
Trigger: AATTTCTATAAAATACCGCCAGCTTTGCGTATTCCA...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTCCTTGTTCTTACTTATaGGGAAAAGACACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVPCSYL*GKDTGE
Trigger: TTCTCCTGTGTCTTTTCCTCATAAGTAAGAACAAGG...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp ACTTATTGGGCACTGAAATGTGTTAATGTCACCTTTGAATTTAACTCTGGCCATGCAGAAAAGCTGTATTaGTTCCCTTTAAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: TYWALKCVNVTFEFNSGHAEKLY*FPLRGT
Trigger: GGTGCCTCTTAAAGGGAAGCAATACAGCTTTTCTGC...ATGGCCAGAGTTAAATTCAAAGGTGACATTAACACATTTCAGTGCCCAATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR GCA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTTTGCAATCTTCTGGGTaGCACTTATCTACCATAATT +
Preference number: 4 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFLQSSG*HLSTII
Trigger: AATTATGGTAGATAAGTGGCACCCAGAAGATTGCAA...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTGTGTCATCCAGCATCTaGATTTTGATGGACACGAGT +
Preference number: 4 (lower is better)
Translates to: YASLESYCVIMYGSMFTFVSSSI*ILMDTS
Trigger: ACTCGTGTCCATCAAAATCCAGATGCTGGATGACAC...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACTCTTGGAGTTGTGTGTaGTCAGGCGGAAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNSWSCV*SGGKNF
Trigger: GAAATTCTTTCCGCCTGACCACACACAACTCCAAGA...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTCTGTGTGCACACTCATaGCAGTTTCAACAACATTTA +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVLCAHS*QFQQHL
Trigger: TAAATGTTGTTGAAACTGCCATGAGTGTGCACACAG...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAACAGAGTAACCTGATCTaGAGACTACATGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKQSNLI*RLHEDA
Trigger: TGCATCTTCATGTAGTCTCCAGATCAGGTTACTCTG...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACGGCATAAGTCAAAGATaGGTTTTGTCCTTGCGAATC +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNGISQR*VLSLRI
Trigger: GATTCGCAAGGACAAAACTCATCTTTGACTTATGCC...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR TCA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTAATAGACTACTTCAATaGACAACTCTCAAACGATCC +
Preference number: 4 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALNRLLQ*TTLKRS
Trigger: GGATCGTTTGAGAGTTGTTCATTGAAGTAGTCTATT...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR TCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAACAGTTTTTACAGCATaGTACCTGTTAGGACAAGTA +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKTVFTA*YLLGQV
Trigger: TACTTGTCCTAACAGGTATCATGCTGTAAAAACTGT...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTAACTTAACAACAACGTaGTTTGGCCTTCTAATCTGT +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVNLTTT*FGLLIC
Trigger: ACAGATTAGAAGGCCAAAGCACGTTGTTGTTAAGTT...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCACAGGGCAAGTCGTTaGTCAATTTCCTTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNHRASR*SISLRK
Trigger: TTTTCTCAAGGAAATTGAGCAACGACTTGCCCTGTG...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR GCA 90 bp TGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATTTCAGCTTGTGTATTTCTaGTATAAAATGTGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: CVVCLKLHSDGLLPTLVFQLVYF*YKMCQQ
Trigger: TTGCTGACACATTTTATAGCAGAAATACACAAGCTG...AAATACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTTGAGACACACTACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR GCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTAATATGATCCACCAATaGAAACCTAAACCAAACCAG +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVNMIHQ*KPKPNQ
Trigger: CTGGTTTGGTTTAGGTTTGCATTGGTGGATCATATT...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAATACTTACATTTTAAGTaGAGGCCACATGGCACAATT +
Preference number: 4 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKYLHFK*RPHGTI
Trigger: AATTGTGCCATGTGGCCTGCACTTAAAATGTAAGTA...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTGATATATTAATACCGTaGATACACTGTGACATGAGC +
Preference number: 4 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVDILIP*IHCDMS
Trigger: GCTCATGTCACAGTGTATGCACGGTATTAATATATC...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR GCA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAATTCCTGAAATTGCCCTaGAATTTCTTAGGCATTCAG +
Preference number: 4 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKFLKLP*NFLGIQ
Trigger: CTGAATGCCTAAGAAATTGCAGGGCAATTTCAGGAA...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
3UTR CAA 72 bp GACCATATTTCGGAAGCAGTTCTAGGAAATAGATTCTaGGACTGCATCACTATTTTTATGGCCAAAATGGGT +
Preference number: 4 (lower is better)
Translates to: DHISEAVLGNRF*DCITIFMAKMG
Trigger: ACCCATTTTGGCCATAAAAATAGTGATGCAGTCCAAGAATCTATTTCCTAGAACTGCTTCCGAAATATGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 72 bp AAATCTCATCAGCATCTTTGGGTGCATTGCCTTCTGTaGTCATACCAGGTCATAAACTTACTGAATTCTCTT +
Preference number: 4 (lower is better)
Translates to: KSHQHLWVHCLL*SYQVINLLNSL
Trigger: AAGAGAATTCAGTAAGTTTATGACCTGGTATGACAACAGAAGGCAATGCACCCAAAGATGCTGATGAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
3UTR CAA 72 bp AAAGTGAAGCCTAGAGACGAGGTTACAGTTTCAGCTTaGTCATGCAATAGCTGTATTAGTTATGCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: KVKPRDEVTVSA*SCNSCISYAKS
Trigger: TGACTTTGCATAACTAATACAGCTATTGCATGACAAAGCTGAAACTGTAACCTCGTCTCTAGGCTTCACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACAGGGAAGATGTCATTTaGCACTCTCGTAATGACAAT +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNREDVI*HSRNDN
Trigger: ATTGTCATTACGAGAGTGCCAAATGACATCTTCCCT...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CCA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACATGCATATGCATCCCTaGAATCTTACTGTGTCATCA +
Preference number: 4 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNMHMHP*NLTVSS
Trigger: TGATGACACAGTAAGATTCCAGGGATGCATATGCAT...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CCA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTGAGTCTGTTGTAAAATaGTTGAGGGAATTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: YASLESYCVIMYGSMFTFESVVK*LRELWS
Trigger: TGACCACAATTCCCTCAACCATTTTACAACAGACTC...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS CCA 90 bp CCCCTCCCTGGCTGGGCTCAGTCTGGGAGCACCCGGCCTGAACTGTaGCATGGGCACCAGGTGGCGCAGGCTCCCAGCACTCACCTCGGC +
Preference number: 5 (lower is better)
Translates to: PLPGWAQSGSTRPEL*HGHQVAQAPSTHLG
Trigger: GCCGAGGTGAGTGCTGGGAGCCTGCGCCACCTGGTGCCCATGCCACAGTTCAGGCCGGGTGCTCCCAGACTGAGCCCAGCCAGGGAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS GCA 90 bp GCACCATTGTGTTGCCGCGGTGCGGGGCCTGGCGCTCCAGCGATGTaGGCGAGGCGCTCAGGTCATCCTCTGACTCCTGGTCAGCCGCGG +
Preference number: 5 (lower is better)
Translates to: APLCCRGAGPGAPAM*ARRSGHPLTPGQPR
Trigger: CCGCGGCTGACCAGGAGTCAGAGGATGACCTGAGCGCCTCGCGCACATCGCTGGAGCGCCAGGCCCCGCACCGCGGCAACACAATGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS GCA 90 bp GTCCCACTGCTGGTGGAGCCCTCGGTCACTTGCAGGGGTGCCAGCTaGCCCGCCATGCCTCTGGCACACACCGACTGCACAGCAGGGACC +
Preference number: 5 (lower is better)
Translates to: VPLLVEPSVTCRGAS*PAMPLAHTDCTAGT
Trigger: GGTCCCTGCTGTGCAGTCGGTGTGTGCCAGAGGCATGGCGGGGCAGCTGGCACCCCTGCAAGTGACCGAGGGCTCCACCAGCAGTGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CCA 90 bp GGCGCAGGCTCCCAGCACTCACCTCGGCAGTCCCTGAAGTCGGCGTaGCTCGGCGGGTGGTGTTTGCACAGCCGCTCCAGGACCTGCTTG +
Preference number: 5 (lower is better)
Translates to: GAGSQHSPRQSLKSA*LGGWCLHSRSRTCL
Trigger: CAAGCAGGTCCTGGAGCGGCTGTGCAAACACCACCCGCCGAGCCACGCCGACTTCAGGGACTGCCGAGGTGAGTGCTGGGAGCCTGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS GCA 90 bp ACCTCCAGGCTCAGGGCCGGCCCAGCCCCTGGAGCATTGTTAGGATaGGCTGCAGCCCAGCTAGGGGGCAGGGACAGGCACCTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: TSRLRAGPAPGALLG*AAAQLGGRDRHLCP
Trigger: TGGACACAGGTGCCTGTCCCTGCCCCCTAGCTGGGCTGCAGCGCATCCTAACAATGCTCCAGGGGCTGGGCCGGCCCTGAGCCTGGAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 90 bp CACAGCGGGCACCTGCCCCAGGAGGGCACAGAGAGCAGCTCTCCCTaGACCAGGGCCCTGGGCTGGGGCATGTCCGTGACTGAAGGATGT +
Preference number: 5 (lower is better)
Translates to: HSGHLPQEGTESSSP*TRALGWGMSVTEGC
Trigger: ACATCCTTCAGTCACGGACATGCCCCAGCCCAGGGCCCTGGTGCAGGGAGAGCTGCTCTCTGTGCCCTCCTGGGGCAGGTGCCCGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 90 bp CCCTCCTCGGGCGTGGGCCTGGAAGGGACCATGGCAGCCAGTGTTTaGCTGTACGTGATGGCCCGGGTGGCAAGTCCCGCCAGGACTGAG +
Preference number: 5 (lower is better)
Translates to: PSSGVGLEGTMAASV*LYVMARVASPARTE
Trigger: CTCAGTCCTGGCGGGACTTGCCACCCGGGCCATCACGTACAGGCAAACACTGGCTGCCATGGTCCCTTCCAGGCCCACGCCCGAGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 90 bp CTCAGTCTGGGAGCACCCGGCCTGAACTGTGGCATGGGCACCAGGTaGCGCAGGCTCCCAGCACTCACCTCGGCAGTCCCTGAAGTCGGC +
Preference number: 5 (lower is better)
Translates to: LSLGAPGLNCGMGTR*RRLPALTSAVPEVG
Trigger: GCCGACTTCAGGGACTGCCGAGGTGAGTGCTGGGAGCCTGCGCCACCTGGTGCCCATGCCACAGTTCAGGCCGGGTGCTCCCAGACTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS-3UTR CAA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGACGTGCACCATTGTGTaGCCGCGGTGCGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTTCTIV*PRCGAW
Trigger: CCAGGCCCCGCACCGCGGCAACACAATGGTGCACGT...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS GCA 90 bp GACTCACTGGACTCAGTCCCACTGCTGGTGGAGCCCTCGGTCACTTaGAGGGGTGCCAGCTGCCCCGCCATGCCTCTGGCACACACCGAC +
Preference number: 5 (lower is better)
Translates to: DSLDSVPLLVEPSVT*RGASCPAMPLAHTD
Trigger: GTCGGTGTGTGCCAGAGGCATGGCGGGGCAGCTGGCACCCCTGCAAGTGACCGAGGGCTCCACCAGCAGTGGGACTGAGTCCAGTGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 90 bp GGCCTGGCGCTCCAGCGATGTGCGCGAGGCGCTCAGGTCATCCTCTaGCTCCTGGTCAGCCGCGGTGGCTTCATCAGGGGACTTGTTGTC +
Preference number: 5 (lower is better)
Translates to: GLALQRCARGAQVIL*LLVSRGGFIRGLVV
Trigger: GACAACAAGTCCCCTGATGAAGCCACCGCGGCTGACCAGGAGTCAGAGGATGACCTGAGCGCCTCGCGCACATCGCTGGAGCGCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS TCA 90 bp GCCAGCATCCCTGTCATCCCCGTGACACCTGGAGCCCAAGAGGCCTaGGTCATTCCAGAGGAGGGCGGCCCCCTCACCTCATGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: ASIPVIPVTPGAQEA*VIPEEGGPLTSCCH
Trigger: GTGGCAGCATGAGGTGAGGGGGCCGCCCTCCTCTGGAATGACTCAGGCCTCTTGGGCTCCAGGTGTCACGGGGATGACAGGGATGCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 90 bp CAAAGTGGCTTTTCGGGGTCAGCTTCTGCTGCTGGGCCTGGCTGCTaGCCCGCATCAGACAGGGACTTGGGAGCCCAGGCAGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: QSGFSGSASAAGPGC*PASDRDLGAQAAPS
Trigger: GGAGGGAGCTGCCTGGGCTCCCAAGTCCCTGTCTGATGCGGGGCAGCAGCCAGGCCCAGCAGCAGAAGCTGACCCCGAAAAGCCACTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 90 bp CTCTTCCTCCGGCCCTCATCCTCATCGTCCGTCCGGGGGCAGGCCTaGTCATTCAGCAGCGGGCTGATCAAGGGAGAGGCCTGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LFLRPSSSSSVRGQA*SFSSGLIKGEACLV
Trigger: CACCAAGCAGGCCTCTCCCTTGATCAGCCCGCTGCTGAATGACCAGGCCTGCCCCCGGACGGACGATGAGGATGAGGGCCGGAGGAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000457029.3
ENST00000595437.5
ENST00000627049.2
CDS CCA 90 bp TCCGTGATCTCTGCCAAAGCGGCTCGGCAGTCCCTGAAGTCGGCGTaGCTCGGCGGGTGGTGTTTGCACAGCCGCTCCAGGACCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SVISAKAARQSLKSA*LGGWCLHSRSRTCL
Trigger: CAAGCAGGTCCTGGAGCGGCTGTGCAAACACCACCCGCCGAGCCACGCCGACTTCAGGGACTGCCGAGCCGCTTTGGCAGAGATCACGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000423063.2
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS GCA 90 bp TGCACCGTCCACTTCTCTCTCACGGCCCTAGTGCAGGGTTGCCACTaGCCAGGTACCTGCCTGCAGACCCTCCAGCACCCAGGTACCTGC +
Preference number: 5 (lower is better)
Translates to: CTVHFSLTALVQGCH*PGTCLQTLQHPGTC
Trigger: GCAGGTACCTGGGTGCTGGAGGGTCTGCAGGCAGGTACCTGGGCAGTGGCAACCCTGCACTAGGGCCGTGAGAGAGAAGTGGACGGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CCA 90 bp CCATGGGCGACAGATCTGAGGAGTCCTCAGAGCCAGGAGGGGCCCTaGGTCCTTTCCTCCGGGCTCGGCCAACACACAGGCAATGCCAGT +
Preference number: 5 (lower is better)
Translates to: PWATDLRSPQSQEGP*VLSSGLGQHTGNAS
Trigger: ACTGGCATTGCCTGTGTGTTGGCCGAGCCCGGAGGAAAGGACCCAGGGCCCCTCCTGGCTCTGAGGACTCCTCAGATCTGTCGCCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS GCA 90 bp GGGCAGGCCTGGTCATTCAGCAGCGGGCTGATCAAGGGAGAGGCCTaGTTGGTGTCGGGGCTCAGGTTGGGAGACAAGGTCACGTTGGCA +
Preference number: 5 (lower is better)
Translates to: GQAWSFSSGLIKGEA*LVSGLRLGDKVTLA
Trigger: TGCCAACGTGACCTTGTCTCCCAACCTGAGCCCCGACACCAAGCAGGCCTCTCCCTTGATCAGCCCGCTGCTGAATGACCAGGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000457029.3
ENST00000595437.5
ENST00000627049.2
CDS GCA 90 bp TGCGCTGCAGCCCAGCTAGGGGGCAGGGACAGGCACCTGTGTCCATaGTACCTCCAAACAACTCTGAGCAGGCCTGACGCACTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: CAAAQLGGRDRHLCP*YLQTTLSRPDALVA
Trigger: AGCCACCAGTGCGTCAGGCCTGCTCAGAGTTGTTTGGAGGTAGCATGGACACAGGTGCCTGTCCCTGCCCCCTAGCTGGGCTGCAGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 90 bp TCCAACTGCACCGTCCACTTCTCTCTCACGGCCCTAGTGCAGGGTTaGCACTGCCCAGGTACCTGCCTGCAGACCCTCCAGCACCCAGGT +
Preference number: 5 (lower is better)
Translates to: SNCTVHFSLTALVQG*HCPGTCLQTLQHPG
Trigger: ACCTGGGTGCTGGAGGGTCTGCAGGCAGGTACCTGGGCAGTGGCAACCCTGCACTAGGGCCGTGAGAGAGAAGTGGACGGTGCAGTTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS GCA 90 bp GTTACGGCTTTGCGGGGTCCATGGGGCGCAGTGGGATGTAGCCGCTaGTTTCTGTCGCAGCCTCACTTTGTGGCTCTCCCTGTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: VTALRGPWGAVGCSR*FLSQPHFVALPVPC
Trigger: GCAGGGCACAGGGAGAGCCACAAAGTGAGGCTGCGACAGAAAGCAGCGGCTACATCCCACTGCGCCCCATGGACCCCGCAAAGCCGTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CCA 90 bp GGCTCCCCGGCGGAAACCTTCGGTTCCTTTCCTCGCCGGCAGCTCTaGCCCCCTGGAGATTCGGCACCTTCTCCAAATGTAAGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GSPAETFGSFPRRQL*PPGDSAPSPNVRLV
Trigger: CACCAGCCTTACATTTGGAGAAGGTGCCGAATCTCCAGGGGGCCAGAGCTGCCGGCGAGGAAAGGAACCGAAGGTTTCCGCCGGGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596580.2
ENST00000600190.1
ENST00000627049.2
CDS CCA 90 bp GGATCAGCATCTCAGAGTCTGACTCACTGGACTCAGTCCCACTGCTaGTGGAGCCCTCGGTCACTTGCAGGGGTGCCAGCTGCCCCGCCA +
Preference number: 5 (lower is better)
Translates to: GSASQSLTHWTQSHC*WSPRSLAGVPAAPP
Trigger: TGGCGGGGCAGCTGGCACCCCTGCAAGTGACCGAGGGCTCCACCAGCAGTGGGACTGAGTCCAGTGAGTCAGACTCTGAGATGCTGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGTCCTGGTACGCACTATaGGCATCTGGCCGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTSWYAL*ASGRSL
Trigger: CAAGCTCCGGCCAGATGCCAATAGTGCGTACCAGGA...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCGCTCCGTCCGCCTGCTaGTTACCCGCGGGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFAPSAC*LPAGLL
Trigger: GAGAAGCCCCGCGGGTAACAAGCAGGCGGACGGAGC...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCACGTGCACCATTGTGTaGCCGCGGTGCGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSTCTIV*PRCGAW
Trigger: CCAGGCCCCGCACCGCGGCAACACAATGGTGCACGT...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAAGCACACGTGCACCATaGTGTTGCCGCGGTGCGGGG +
Preference number: 5 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKESTRAP*CCRGAG
Trigger: CCCCGCACCGCGGCAACACAATGGTGCACGTGTGCT...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGGGCCCTCGCCTCCGCTaGTTTGAGACTCTCGTTAGA +
Preference number: 5 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTGPRLR*FETLVR
Trigger: TCTAACGAGAGTCTCAAACAAGCGGAGGCGAGGGCC...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS TCA 90 bp GTGCAGGGTAAGGGCGCAGGGAAGTTGGGACCCCACTTTCTGCCATaGGAACAGAATCGCCTGCTGGTGTCGGGCAGTGGGACCCCAGGT +
Preference number: 5 (lower is better)
Translates to: VQGKGAGKLGPHFLP*EQNRLLVSGSGTPG
Trigger: ACCTGGGGTCCCACTGCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTCCCTGCGCCCTTACCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS TCA 90 bp CCTCTGGCAGCCCGGGATGCTGGACCTGTGCTTGGCTGCGGGGGCTaGGGTTTACTCTGCTGGGTCCTATCCTTAACGACCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PLAARDAGPVLGCGG*GLLCWVLSLTTSSS
Trigger: AGAGGAGGAGGTCGTTAAGGATAGGACCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAGCACAGGTCCAGCATCCCGGGCTGCCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 90 bp GGAACCCTCAGAGCAAGGACCACACGACCTGCACAAACGCAGCCCTaGCTCGCCTCCATGCTGCCCACGTGTGCTCTTTACATCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GTLRARTTRPAQTQP*LASMLPTCALYIRA
Trigger: GGCCCTGATGTAAAGAGCACACGTGGGCAGCATGGAGGCGAGGCAGGGCTGCGTTTGTGCAGGTCGTGTGGTCCTTGCTCTGAGGGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601853.5
CDS GCA 90 bp GTGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATaGATTGCCAGCAGGCGGAAGCTGAAGGAGGGAAAGATCCATCCC +
Preference number: 5 (lower is better)
Translates to: VCPVTPRQKWGRRTP*IASRRKLKEGKIHP
Trigger: GGGATGGATCTTTCCCTCCTTCAGCTTCCGCCTGCTGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 90 bp ACACCGTGCAGGGTAAGGGCGCAGGGAAGTTGGGACCCCACTTTCTaGCATGAGAACAGAATCGCCTGCTGGTGTCGGGCAGTGGGACCC +
Preference number: 5 (lower is better)
Translates to: TPCRVRAQGSWDPTF*HENRIACWCRAVGP
Trigger: GGGTCCCACTGCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTCCCTGCGCCCTTACCCTGCACGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 90 bp TCAGGGGCGGGGCTGCTGCTCTTCTCCGCCAGGTCAATGGCCATCTaGATGTCCTCAACCCACTTCTCCATCTCGGACCGAGAACTGGCG +
Preference number: 5 (lower is better)
Translates to: SGAGLLLFSARSMAI*MSSTHFSISDRELA
Trigger: CGCCAGTTCTCGGTCCGAGATGGAGAAGTGGGTTGAGGACATCCAGATGGCCATTGACCTGGCGGAGAAGAGCAGCAGCCCCGCCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS CCA 90 bp CCAGGAACTCAGGGGCGGGGCTGCTGCTCTTCTCCGCCAGGTCAATaGCCATCTGGATGTCCTCAACCCACTTCTCCATCTCGGACCGAG +
Preference number: 5 (lower is better)
Translates to: PGTQGRGCCSSPPGQ*PSGCPQPTSPSRTE
Trigger: CTCGGTCCGAGATGGAGAAGTGGGTTGAGGACATCCAGATGGCCATTGACCTGGCGGAGAAGAGCAGCAGCCCCGCCCCTGAGTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS-3UTR CAA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAGTGCCTTCCCTGTCCTaGGCCGGGTGCAACCGGATT +
Preference number: 5 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEVPSLS*AGCNRI
Trigger: AATCCGGTTGCACCCGGCCAAGGACAGGGAAGGCAC...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGGCATCTGGCCGGAGCTaGATGAGAAAGCGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PPADARTGGGSAVHSDAEASGRS*MRKRFL
Trigger: GAGGAAGCGCTTTCTCATCAAGCTCCGGCCAGATGC...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS GCA 90 bp GCCTGCCCATCGGTTCTGACCACAAATGCTGCGATTCTTCCTGCTTaGTGTGGCTCTAGGGGCGGCCACACTGCCCCTGAGGACACACTG +
Preference number: 5 (lower is better)
Translates to: ACPSVLTTNAAILPA*CGSRGGHTAPEDTL
Trigger: CAGTGTGTCCTCAGGGGCAGTGTGGCCGCCCCTAGAGCCACAGCAAGCAGGAAGAATCGCAGCATTTGTGGTCAGAACCGATGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596545.5
CDS CCA 90 bp GGCGGAAACCTTCGGTTCCTTTCCTCGCCGGCAGCTCTGGCCCCCTaGAGATTCGGCACCTTCTCCAAATGTAAGGCTGGTGCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: GGNLRFLSSPAALAP*RFGTFSKCKAGALL
Trigger: CAGCAGAGCACCAGCCTTACATTTGGAGAAGGTGCCGAATCTCCAGGGGGCCAGAGCTGCCGGCGAGGAAAGGAACCGAAGGTTTCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596580.2
ENST00000600190.1
ENST00000627049.2
CDS CCA 90 bp ACACGCCCAGTACAGGTGCTCGCTGCGCAGCTGGGGTGTGAGAGCTaGCCAGGCCAGGTCATGAAGACTTCCGATTTTAGCCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TRPVQVLAAQLGCES*PGQVMKTSDFSLRQ
Trigger: CTGCCTCAGGCTAAAATCGGAAGTCTTCATGACCTGGCCTGGCCAGCTCTCACACCCCAGCTGCGCAGCGAGCACCTGTACTGGGCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS-3UTR CAA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTGCTCCGTCCGCCTGCTaGTTACCCGCGGGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: GKPREWQPPHHHREQADVAPSAC*LPAGLL
Trigger: GAGAAGCCCCGCGGGTAACAAGCAGGCGGACGGAGC...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTGTGTCGGGGCTCAGGTaGGGAGACAAGGTCACGTTG +
Preference number: 5 (lower is better)
Translates to: QSELHREGAFLVLRWAGAVSGLR*GDKVTL
Trigger: CAACGTGACCTTGTCTCCCAACCTGAGCCCCGACAC...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCAAGCCGCCGGGAGCTCTaGATTCCATTCTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPSRREL*IPFSRA
Trigger: GGCCCTGGAGAATGGAATCAAGAGCTCCCGGCGGCT...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGGTGACAGTCCAGGTATaGCACTGGATCTCGGCTTTG +
Preference number: 5 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTVTVQV*HWISAL
Trigger: CAAAGCCGAGATCCAGTGCAATACCTGGACTGTCAC...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGAGCGCCCTGGACTGCTaGCGCACTTGCTCACCGAGA +
Preference number: 5 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVSALDC*RTCSPR
Trigger: TCTCGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGCT...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS TCA 90 bp TGTTTGCCTGTACGTGATGGCCCGGGTGGCAAGTCCCGCCAGGACTaGGCTGTAGATAAAGCCAACCCCCGTCCCTTGTCCAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: CLPVRDGPGGKSRQD*AVDKANPRPLSRQK
Trigger: CTTCTGCCTGGACAAGGGACGGGGGTTGGCTTTATCTACAGCTCAGTCCTGGCGGGACTTGCCACCCGGGCCATCACGTACAGGCAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 90 bp CCTGATGTTTGGAAGAGGGGGTCCTCTTCTGCAGGGCCCTGTGCGTaGGAAGGGGGTGTCTACCTTTCGAACGTGTACTCGCTTTCCGCC +
Preference number: 5 (lower is better)
Translates to: PDVWKRGSSSAGPCA*EGGVYLSNVYSLSA
Trigger: GGCGGAAAGCGAGTACACGTTCGAAAGGTAGACACCCCCTTCCCACGCACAGGGCCCTGCAGAAGAGGACCCCCTCTTCCAAACATCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 90 bp CCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGCAGTaGGACCCCAGGTCTAAACGCTTAGTTGGCAGGGAAGGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: PLSAMRTESPAGVGQ*DPRSKRLVGREGWG
Trigger: GCCCCACCCTTCCCTGCCAACTAAGCGTTTAGACCTGGGGTCCCACTGCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 90 bp AGTGCGGGGAAGCCCTACGCCCAGCCTCTCTTCGCCCCTCCTCCCTaGACAGCAGATAGACACCGCTGGTCAGATCACCCTCATAATTGT +
Preference number: 5 (lower is better)
Translates to: SAGKPYAQPLFAPPP*TADRHRWSDHPHNC
Trigger: ACAATTATGAGGGTGATCTGACCAGCGGTGTCTATCTGCTGTCCAGGGAGGAGGGGCGAAGAGAGGCTGGGCGTAGGGCTTCCCCGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CCA 90 bp ACATTTCAGGCAAGGAATAAGGGCCTTGCCCTCCTAGTGGGTGTGTaGATTCGGGCCACCTGTGCGGGAGCCACCTACGCAGGGCCAACT +
Preference number: 5 (lower is better)
Translates to: TFQARNKGLALLVGV*IRATCAGATYAGPT
Trigger: AGTTGGCCCTGCGTAGGTGGCTCCCGCACAGGTGGCCCGAATCCACACACCCACTAGGAGGGCAAGGCCCTTATTCCTTGCCTGAAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS-3UTR CAA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGGAGTTCTTCTTGGAGTaGTGTGTGGTCAGGCGGAAA +
Preference number: 5 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTEFFLE*CVVRRK
Trigger: TTTCCGCCTGACCACACACAACTCCAAGAAGAACTC...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTAGCCGCCGGGAGCTCTaGATTCCATTCTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQASRREL*IPFSRA
Trigger: GGCCCTGGAGAATGGAATCAAGAGCTCCCGGCGGCT...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTCTGGAAAGAATGGGGTaGAATTGGCCCTCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: QSELHREGAFLVLRWAGALERMG*NWPSPP
Trigger: CGGAGGCGAGGGCCAATTCAACCCCATTCTTTCCAG...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS TCA 90 bp GCGGAAACGAGTGTGTCCGGCCATCAATACACAAGAGACTCTTTGTaGCTCAACACGTGGGGTCGCGAGGCAGAGCTGGTGGCACTGCGG +
Preference number: 5 (lower is better)
Translates to: AETSVSGHQYTRDSL*LNTWGREAELVALR
Trigger: CCGCAGTGCCACCAGCTCTGCCTCGCGACCCCACGTGTTGAGTCACAAAGAGTCTCTTGTGTATTGATGGCCGGACACACTCGTTTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS TCA 90 bp GGGGCAGGGACAGGCACCTGTGTCCATGCTACCTCCAAACAACTCTaGGCAGGCCTGACGCACTGGTGGCTCATTTCGTCCCTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: GAGTGTCVHATSKQL*AGLTHWWLISSLCQ
Trigger: TTGGCAAAGGGACGAAATGAGCCACCAGTGCGTCAGGCCTGCTCAGAGTTGTTTGGAGGTAGCATGGACACAGGTGCCTGTCCCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 90 bp CAGCACCTTCCCAGGAGCTCTTTGCCAGCAGATCCAGGCTGTCCGTaGTCAAGGGCCACCTCGGTGAGCAGATCAGCTTTCGAGATAAGC +
Preference number: 5 (lower is better)
Translates to: QHLPRSSLPADPGCP*SRATSVSRSAFEIS
Trigger: GCTTATCTCGAAAGCTGATCTGCTCACCGAGGTGGCCCTTGAGCACGGACAGCCTGGATCTGCTGGCAAAGAGCTCCTGGGAAGGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601361.1
CDS GCA 90 bp GAGACCCAGTTCTGTCCCAACTCATATTTGGACTTGAACTGCTGCTaGTGGGAGACAATGGGGTGGCCAGGGGGCTGTGACCAGCCGAGC +
Preference number: 5 (lower is better)
Translates to: ETQFCPNSYLDLNCC*WETMGWPGGCDQPS
Trigger: GCTCGGCTGGTCACAGCCCCCTGGCCACCCCATTGTCTCCCAGCAGCAGCAGTTCAAGTCCAAATATGAGTTGGGACAGAACTGGGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 90 bp CGCTGCTTTCTGTCGCAGCCTCACTTTGTGGCTCTCCCTGTGCCCTaGACGCTTTTGGCAATGTTCCGGTCTCTGTCCCCTCTGAACCTG +
Preference number: 5 (lower is better)
Translates to: RCFLSQPHFVALPVP*TLLAMFRSLSPLNL
Trigger: CAGGTTCAGAGGGGACAGAGACCGGAACATTGCCAAAAGCGTGCAGGGCACAGGGAGAGCCACAAAGTGAGGCTGCGACAGAAAGCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CCA 90 bp GTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTaGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCATGATTTC +
Preference number: 5 (lower is better)
Translates to: VSSYTSQSSTERVRS*FSGGQVLWCGAHDF
Trigger: GAAATCATGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597596.1
CDS CCA 90 bp AATGAAAGGAATGGAAGTACTGCTGCCTCTGGCAGCCCGGGATGCTaGACCTGTGCTTGGCTGCGGGGGCTGAGGTTTACTCTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: NERNGSTAASGSPGC*TCAWLRGLRFTLLG
Trigger: ACCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAGCACAGGTCCAGCATCCCGGGCTGCCAGAGGCAGCAGTACTTCCATTCCTTTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CCA 90 bp ACCCAGTTCTGTCCCAACTCATATTTGGACTTGAACTGCTGCTGCTaGGAGACAATGGGGTGGCCAGGGGGCTGTGACCAGCCGAGCCCT +
Preference number: 5 (lower is better)
Translates to: TQFCPNSYLDLNCCC*ETMGWPGGCDQPSP
Trigger: AGGGCTCGGCTGGTCACAGCCCCCTGGCCACCCCATTGTCTCCCAGCAGCAGCAGTTCAAGTCCAAATATGAGTTGGGACAGAACTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTACGAGGTTGAGGTGGTaGCAAACTGCATCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QSELHREGAFLVLRWAGATRLRW*QTASSS
Trigger: GCTGCTGGATGCAGTTTGCAACCACCTCAACCTCGT...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTTTGGCAACGGCCAGATaGATCTTCGTGCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: QSELHREGAFLVLRWAGALATAR*IFVPSL
Trigger: CAGGGAAGGCACGAAGATCAATCTGGCCGTTGCCAA...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAACTAAAGAGGACGGGCTaGGGCTTTGGTTTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKELKRTG*GFGLGS
Trigger: AGAGCCCAAACCAAAGCCCAAGCCCGTCCTCTTTAG...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGGCTCCGTCCGCCTGCTaGTTACCCGCGGGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVAPSAC*LPAGLL
Trigger: GAGAAGCCCCGCGGGTAACAAGCAGGCGGACGGAGC...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCCTGGAAAGAATGGGGTaGAATTGGCCCTCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSLERMG*NWPSPP
Trigger: CGGAGGCGAGGGCCAATTCAACCCCATTCTTTCCAG...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCACACTAGTATTTTCTaGAGGGCACACAGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTHTSIF*RAHRKQ
Trigger: CTGCTTCCTGTGTGCCCTCAAGAAAATACTAGTGTG...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGGACACCAGTGTGGTTaGGGGTGCACTGGCCACTTC +
Preference number: 5 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCAGHQCG*GCTGHF
Trigger: GAAGTGGCCAGTGCACCCCAAACCACACTGGTGTCC...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCAGGACTGCTTGCGCACTaGCTCACCGAGATGATGCAG +
Preference number: 5 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPGLLAH*LTEMMQ
Trigger: CTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCC...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGCAGATGAGCTGCCTCTaGAGGTGCTTATCATCTCTC +
Preference number: 5 (lower is better)
Translates to: PPADARTGGGSAVHSDAEQMSCL*RCLSSL
Trigger: GAGAGATGATAAGCACCTCAAGAGGCAGCTCATCTG...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS GCA 90 bp GCAACGGCCAGATTGATCTTCGTGCCTTCCCTGTCCTTGGCCGGGTaGAACCGGATTCCATACATCTCTAGCCGACGGGCAATCTCTAGG +
Preference number: 5 (lower is better)
Translates to: ATARLIFVPSLSLAG*NRIPYISSRRAISR
Trigger: CCTAGAGATTGCCCGTCGGCTAGAGATGTATGGAATCCGGTTGCACCCGGCCAAGGACAGGGAAGGCACGAAGATCAATCTGGCCGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000319562.11
ENST00000595380.5
ENST00000595437.5
ENST00000596467.5
ENST00000596580.2
ENST00000601009.1
ENST00000627049.2
CDS GCA 90 bp GTCAGAGATCTCCAAGCAAGATGTCTAGGGCCTCAGCCAACACCGTaGAGGGTAAGGGCGCAGGGAAGTTGGGACCCCACTTTCTGCCAT +
Preference number: 5 (lower is better)
Translates to: VRDLQARCLGPQPTP*RVRAQGSWDPTFCH
Trigger: ATGGCAGAAAGTGGGGTCCCAACTTCCCTGCGCCCTTACCCTGCACGGTGTTGGCTGAGGCCCTAGACATCTTGCTTGGAGATCTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 90 bp CTTGAGACCCAGTTCTGTCCCAACTCATATTTGGACTTGAACTGCTaGTGCTGGGAGACAATGGGGTGGCCAGGGGGCTGTGACCAGCCG +
Preference number: 5 (lower is better)
Translates to: LETQFCPNSYLDLNC*CWETMGWPGGCDQP
Trigger: CGGCTGGTCACAGCCCCCTGGCCACCCCATTGTCTCCCAGCAGCAGCAGTTCAAGTCCAAATATGAGTTGGGACAGAACTGGGTCTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CCA 90 bp GAGACTCTTTGTGACTCAACACGTGGGGTCGCGAGGCAGAGCTGGTaGCACTGCGGATCACTTCCATCCACCTTTCGAACGTGTACTCGC +
Preference number: 5 (lower is better)
Translates to: ETLCDSTRGVARQSW*HCGSLPSTFRTCTR
Trigger: GCGAGTACACGTTCGAAAGGTGGATGGAAGTGATCCGCAGTGCCACCAGCTCTGCCTCGCGACCCCACGTGTTGAGTCACAAAGAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS CCA 90 bp CCGCTGAACATCCTGCACAATGCAGGACGGACTCCCCAAATTACCTaGCCTTGTCCCAGGCCTTTCAGGATCTGGACTGCAAGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: PLNILHNAGRTPQIT*PCPRPFRIWTARLD
Trigger: GTCCAGCCTTGCAGTCCAGATCCTGAAAGGCCTGGGACAAGGCCAGGTAATTTGGGGAGTCCGTCCTGCATTGTGCAGGATGTTCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS-3UTR CAA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGGGCTTGGGCTTTGGTTaGGGCTCTTCAAAAAGTCTA +
Preference number: 5 (lower is better)
Translates to: PPADARTGGGSAVHSDAEGLGFG*GSSKSL
Trigger: TAGACTTTTTGAAGAGCCCAAACCAAAGCCCAAGCC...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTGCTCCGTCCGCCTGCTaGTTACCCGCGGGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIAPSAC*LPAGLL
Trigger: GAGAAGCCCCGCGGGTAACAAGCAGGCGGACGGAGC...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCCAATCAAATCTTTCTaGAGTTCGTGCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTPIKSF*SSCSFW
Trigger: CCAGAAGCTGCACGAACTCAAGAAAGATTTGATTGG...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCCTGCTGGGGGCAGGCTaGCTGCATTTCACTCACGGA +
Preference number: 5 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEALLGAG*LHFTHG
Trigger: TCCGTGAGTGAAATGCAGCAAGCCTGCCCCCAGCAG...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 90 bp TCAAATGTAAGTCCCTCCGATGCCTCCTTTCTGCTCCCCGCGCAGTaGATAGTGAGGCCACTGCTGCTTACCCTTCCCGGAACCACAAGA +
Preference number: 5 (lower is better)
Translates to: SNVSPSDASFLLPAQ*IVRPLLLTLPGTTR
Trigger: TCTTGTGGTTCCGGGAAGGGTAAGCAGCAGTGGCCTCACTATGCACTGCGCGGGGAGCAGAAAGGAGGCATCGGAGGGACTTACATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423063.2
CDS GCA 90 bp CACAGCTTTTCCCCAAGAACCGATCCAGCAGATCCAGGCTGTCCGTaGTCAAGGGCCACCTCGGTGAGCAGATCAGCTTTCGAGATAAGC +
Preference number: 5 (lower is better)
Translates to: HSFSPRTDPADPGCP*SRATSVSRSAFEIS
Trigger: GCTTATCTCGAAAGCTGATCTGCTCACCGAGGTGGCCCTTGAGCACGGACAGCCTGGATCTGCTGGATCGGTTCTTGGGGAAAAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427404.5
CDS CCA 90 bp ACACCTGCACCTCAGCTGTGCTGTATCTACTGGGACTTTCCAGGCTaGAGGACAACGGAGTGCCCAAAGTCACACTCACTGGAGGCAAGC +
Preference number: 5 (lower is better)
Translates to: TPAPQLCCIYWDFPG*RTTECPKSHSLEAS
Trigger: GCTTGCCTCCAGTGAGTGTGACTTTGGGCACTCCGTTGTCCTCCAGCCTGGAAAGTCCCAGTAGATACAGCACAGCTGAGGTGCAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596545.5
CDS CCA 90 bp CAGCCTCTCTTCGCCCCTCCTCCCTGGACAGCAGATAGACACCGCTaGTCAGATCACCCTCATAATTGTCATTTGTTTGGGACCGGGACC +
Preference number: 5 (lower is better)
Translates to: QPLFAPPPWTADRHR*SDHPHNCHLFGTGT
Trigger: GGTCCCGGTCCCAAACAAATGACAATTATGAGGGTGATCTGACCAGCGGTGTCTATCTGCTGTCCAGGGAGGAGGGGCGAAGAGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAATTTTCCAGAAGGACTaGCAGAAATCCCGACTGGCC +
Preference number: 5 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEIFQKD*QKSRLA
Trigger: GGCCAGTCGGGATTTCTGCAAGTCCTTCTGGAAAAT...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAAAGTACGCTTTATCAGTaGGGAATCTCTTCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKESTLYQ*GISSSG
Trigger: GCCGGAGGAAGAGATTCCCAACTGATAAAGCGTACT...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTACTCGGCGGGTGGTGTTaGCACAGCCGCTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLLGGWC*HSRSRT
Trigger: GGTCCTGGAGCGGCTGTGCAAACACCACCCGCCGAG...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGCCCGGAACCACAAGATaGTCAATGCCAATCAAATCT +
Preference number: 5 (lower is better)
Translates to: PPADARTGGGSAVHSDAEPGTTR*SMPIKS
Trigger: AGATTTGATTGGCATTGACAATCTTGTGGTTCCGGG...CTCAGCGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATACGTGCACCATTGTGTaGCCGCGGTGCGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYTCTIV*PRCGAW
Trigger: CCAGGCCCCGCACCGCGGCAACACAATGGTGCACGT...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTGCACCAAGAAGTAGGTaGGGAACAGGTGTTTTCAGG +
Preference number: 5 (lower is better)
Translates to: QSELHREGAFLVLRWAGAAPRSR*GTGVFR
Trigger: CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGC...AGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCACCGAGATGATGCAGTaGGAGGTTGCTGATCTGTGC +
Preference number: 5 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSTEMMQ*EVADLC
Trigger: GCACAGATCAGCAACCTCCAACTGCATCATCTCGGT...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCCCAAAGTCAGAAGGTTaGGAGGGTGGCAGGGTAGAT +
Preference number: 5 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFPKSEG*EGGRVD
Trigger: ATCTACCCTGCCACCCTCCAAACCTTCTGACTTTGG...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp AGGAACAGCTCAGGATTAGCCCACAGGCTGCTGGGGGCAGGCTTGCTGCATTTCGAAGATGCTGAAGGCTaGGTTTCGAGGCTACCATGC +
Preference number: 5 (lower is better)
Translates to: RNSSGLAHRLLGAGLLHFEDAEG*VSRLPC
Trigger: GCATGGTAGCCTCGAAACCAAGCCTTCAGCATCTTC...GAAATGCAGCAAGCCTGCCCCCAGCAGCCTGTGGGCTAATCCTGAGCTGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 90 bp TGGAGCATCTCAGTACCCAACCCGTCCAGGAGGAGCCGGTGGCTTTaGGGAAGGAGGATGAGGACACCATTGGAACTTCAAATGCCTCCT +
Preference number: 5 (lower is better)
Translates to: WSISVPNPSRRSRWL*GRRMRTPLELQMPP
Trigger: AGGAGGCATTTGAAGTTCCAATGGTGTCCTCATCCTCCTTCCTCAAAGCCACCGGCTCCTCCTGGACGGGTTGGGTACTGAGATGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS TCA 90 bp ACCTTCCCAGGAGCTCTTTGCTGCAGGAATGTCAGGAGTCACATGTaGCTGCGTGGAACCCCCATTCTTCCCTGCCAAGCTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: TFPGALCCRNVRSHM*LRGTPILPCQALLF
Trigger: GAAGAGGAGAGCTTGGCAGGGAAGAATGGGGGTTCCACGCAGTCACATGTGACTCCTGACATTCCTGCAGCAAAGAGCTCCTGGGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602263.5
CDS TCA 90 bp TTCCTCATACTTCGTGTCAATGTTGGCTCTTACGTCGTTTCTCTGTaGAGTCGCCCACGGCTCCGGGCTCCAGGCCACCCCAGGAAATTG +
Preference number: 5 (lower is better)
Translates to: FLILRVNVGSYVVSL*SRPRLRAPGHPRKL
Trigger: CAATTTCCTGGGGTGGCCTGGAGCCCGGAGCCGTGGGCGACTTCACAGAGAAACGACGTAAGAGCCAACATTGACACGAAGTATGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS TCA 90 bp CCTTGGGAGTCGAGGGCTCCCGCTCATATCAAAGGTGATGTCTGCTaGATCGTCATCAAGGAATTCTCCGGAAGGAGGCCGGGAGGACTT +
Preference number: 5 (lower is better)
Translates to: PWESRAPAHIKGDVC*IVIKEFSGRRPGGL
Trigger: AAGTCCTCCCGGCCTCCTTCCGGAGAATTCCTTGATGACGATTCAGCAGACATCACCTTTGATATGAGCGGGAGCCCTCGACTCCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 90 bp CAGCTTCTGGAAATTCTCCATCTTGATCATCGTACCGTGGAGCTGTaGCACCATCTCCGTGATCTCTGCCAAAGCGGCTCGGCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: QLLEILHLDHRTVEL*HHLRDLCQSGSAVP
Trigger: AGGGACTGCCGAGCCGCTTTGGCAGAGATCACGGAGATGGTGGCACAGCTCCACGGTACGATGATCAAGATGGAGAATTTCCAGAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000423063.2
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS GCA 90 bp TCCCAGGAGCTCTTTGCTGCAGGAATGTCAGGAGTCACATGTGACTaGGTGGAACCCCCATTCTTCCCTGCCAAGCTCTCCTCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: SQELFAAGMSGVTCD*VEPPFFPAKLSSSP
Trigger: TGGAGAAGAGGAGAGCTTGGCAGGGAAGAATGGGGGTTCCACGCAGTCACATGTGACTCCTGACATTCCTGCAGCAAAGAGCTCCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602263.5
CDS GCA 90 bp CGTTTCCCGAGTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTaGAGTCCGACTGACACTACCCCATGCCATGATTTCATAGTGCTC +
Preference number: 5 (lower is better)
Translates to: RFPSRGQSHWKPCSL*SPTDTTPCHDFIVL
Trigger: GAGCACTATGAAATCATGGCATGGGGTAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTACTCGGGAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600380.1
CDS CCA 90 bp CAAGAGACTCTTTGTGACTCAACACGTGGGGTCGCGAGGCAGAGCTaGTGGCACTGCGGATCACTTCCATCCACCTTTCGAACGTGTACT +
Preference number: 5 (lower is better)
Translates to: QETLCDSTRGVARQS*WHCGSLPSTFRTCT
Trigger: AGTACACGTTCGAAAGGTGGATGGAAGTGATCCGCAGTGCCACCAGCTCTGCCTCGCGACCCCACGTGTTGAGTCACAAAGAGTCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS CCA 90 bp AGGAGCTCTTTGCTGCAGGAATGTCAGGAGTCACATGTGACTGCGTaGAACCCCCATTCTTCCCTGCCAAGCTCTCCTCTTCTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: RSSLLQECQESHVTA*NPHSSLPSSPLLQA
Trigger: TGCCTGGAGAAGAGGAGAGCTTGGCAGGGAAGAATGGGGGTTCCACGCAGTCACATGTGACTCCTGACATTCCTGCAGCAAAGAGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602263.5
CDS CCA 90 bp GGCAGAAGACAGGTGGCCCTTCCTAGGGCAGAAGTTGTCCTTCAGTaGATGATAATGTCAGTCTTCCCTAGAGTTGAGGGCCTCGGGTGG +
Preference number: 5 (lower is better)
Translates to: GRRQVALPRAEVVLQ*MIMSVFPRVEGLGW
Trigger: CCACCCGAGGCCCTCAACTCTAGGGAAGACTGACATTATCATCCACTGAAGGACAACTTCTGCCCTAGGAAGGGCCACCTGTCTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 90 bp TATTACATCTACCAGGAAGATTCCGCATGTATGGCCTTGGCGAGGTaGGGGACCAGCGTTCATAAGGAGGACCCTGGTCCGGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: YYIYQEDSACMALAR*GTSVHKEDPGPGEC
Trigger: ACACTCTCCCGGACCAGGGTCCTCCTTATGAACGCTGGTCCCCCACCTCGCCAAGGCCATACATGCGGAATCTTCCTGGTAGATGTAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCCTTCCCAGGAGCTCTTaGTGGAACTTCAAATGCCTC +
Preference number: 5 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSLPRSS*WNFKCL
Trigger: GAGGCATTTGAAGTTCCACAAAGAGCTCCTGGGAAG...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTGAGTTCTTCTTGGAGTaGTGTGTGGTCAGGCGGAAA +
Preference number: 5 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVEFFLE*CVVRRK
Trigger: TTTCCGCCTGACCACACACAACTCCAAGAAGAACTC...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGACTAGAATTCCCGTGTaGGCAACGGCCAGATTGATC +
Preference number: 5 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVTRIPV*ATARLI
Trigger: GATCAATCTGGCCGTTGCCAACACGGGAATTCTAGT...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTACGCACCTTGGCCCAGTaGAAGGCATTGATCTTAGTG +
Preference number: 5 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLRTLAQ*KALILV
Trigger: CACTAAGATCAATGCCTTCAACTGGGCCAAGGTGCG...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGATTTTCCAGAAGGACTaGCAGAAATCCCGACTGGCC +
Preference number: 5 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVIFQKD*QKSRLA
Trigger: GGCCAGTCGGGATTTCTGCAAGTCCTTCTGGAAAAT...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTGGACGGGCTTGGGCTTaGGTTTGGGCTCTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAGRAWA*VWALQK
Trigger: TTTTTGAAGAGCCCAAACCAAAGCCCAAGCCCGTCC...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGGTGTCGGGGCTCAGGTaGGGAGACAAGGTCACGTTG +
Preference number: 5 (lower is better)
Translates to: RPFASCCLFPATPVRAPQVSGLR*GDKVTL
Trigger: CAACGTGACCTTGTCTCCCAACCTGAGCCCCGACAC...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAATGGAAATTCTCCATCTaGATCATCGTACCGTGGAGC +
Preference number: 5 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEWKFSI*IIVPWS
Trigger: GCTCCACGGTACGATGATCAAGATGGAGAATTTCCA...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATAGCACACGTGCACCATaGTGTTGCCGCGGTGCGGGG +
Preference number: 5 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYSTRAP*CCRGAG
Trigger: CCCCGCACCGCGGCAACACAATGGTGCACGTGTGCT...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTAGTGACAGTCCAGGTATaGCACTGGATCTCGGCTTTG +
Preference number: 5 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLVTVQV*HWISAL
Trigger: CAAAGCCGAGATCCAGTGCAATACCTGGACTGTCAC...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCATTCAGACGCATCAATATGCTGGATaGTGGCGTGAGGTATTTTTA +
Preference number: 5 (lower is better)
Translates to: QRPQRMPGLEVGALFIQTHQYAG*WREVFL
Trigger: TAAAAATACCTCACGCCACAATCCAGCATATTGATG...CGTCTGAATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTGGGGGCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAACCCCGTTCTCACCCTTaGTTGTCTTCTGAAGACAAT +
Preference number: 5 (lower is better)
Translates to: CVPGSQVGRCYGAGRWKEPRSHP*LSSEDN
Trigger: ATTGTCTTCAGAAGACAACAAAGGGTGAGAACGGGG...TTCTTTCCAGCGCCCCGCACCATAGCACCTGCCCACCTGAGAACCAGGAACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATTCCGCATGTATGGCCTaGGCGAGGTGGGGGACCAGC +
Preference number: 5 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHSACMA*ARWGTS
Trigger: GCTGGTCCCCCACCTCGCCAAGGCCATACATGCGGA...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAAAGCAGCTGCGCTGGCTaGCCCCCACTTCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQSSCAG*PPLPTA
Trigger: GGCCGTGGGAAGTGGGGGCAAGCCAGCGCAGCTGCT...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACAGCTCGGGCTGAAGACTaGGCTCCTGGCCTCCTCACT +
Preference number: 5 (lower is better)
Translates to: VHQPRATMLENSPSLRCTARAED*APGLLT
Trigger: AGTGAGGAGGCCAGGAGCCAAGTCTTCAGCCCGAGC...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTCAGGAGAATGCTGCTTaGTTTGAACACGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVQENAA*FEHGGG
Trigger: ACCACCACCGTGTTCAAACAAAGCAGCATTCTCCTG...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 90 bp GAAATCAAGAGAGCTGCGCTGGTGTCATTACACGTCAACCTGCCTTaGGCCAAGTCCTGCTTCACCTGCAGCGCGAACAGGTACCTTGTG +
Preference number: 5 (lower is better)
Translates to: EIKRAALVSLHVNLP*AKSCFTCSANRYLV
Trigger: CACAAGGTACCTGTTCGCGCTGCAGGTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTGTAATGACACCAGCGCAGCTCTCTTGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000595817.5
ENST00000596467.5
ENST00000596580.2
ENST00000596613.5
ENST00000598389.5
ENST00000599040.5
ENST00000600032.5
ENST00000601853.5
ENST00000602263.5
ENST00000627049.2
CDS TCA 90 bp CAGGCACCTGTGTCCATGCTACCTCCAAACAACTCTGAGCAGGCCTaGCGCACTGGTGGCTCATTTCGTCCCTTTGCCAAAGTGACATCA +
Preference number: 5 (lower is better)
Translates to: QAPVSMLPPNNSEQA*RTGGSFRPFAKVTS
Trigger: TGATGTCACTTTGGCAAAGGGACGAAATGAGCCACCAGTGCGTCAGGCCTGCTCAGAGTTGTTTGGAGGTAGCATGGACACAGGTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS TCA 90 bp GAGAGCTATGCCTTGGGAGTCGAGGGCTCCCGCTCATATCAAAGGTaGTGTCTGCTGAATCGTCATCAAGGAATTCTCCGGAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: ESYALGVEGSRSYQR*CLLNRHQGILRKEA
Trigger: GGCCTCCTTCCGGAGAATTCCTTGATGACGATTCAGCAGACATCACCTTTGATATGAGCGGGAGCCCTCGACTCCCAAGGCATAGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 90 bp TGTGTGAAATCAAGAGAGCTGCGCTGGTGTCATTACACGTCAACCTaGCTTGAGCCAAGTCCTGCTTCACCTGCAGCGCGAACAGGTACC +
Preference number: 5 (lower is better)
Translates to: CVKSRELRWCHYTST*LEPSPASPAARTGT
Trigger: GGTACCTGTTCGCGCTGCAGGTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTGTAATGACACCAGCGCAGCTCTCTTGATTTCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000595817.5
ENST00000596467.5
ENST00000596580.2
ENST00000596613.5
ENST00000598389.5
ENST00000599040.5
ENST00000600032.5
ENST00000601853.5
ENST00000602263.5
ENST00000627049.2
CDS GCA 90 bp CTGTGCTGTATCTACTGGGACTTTCCAGGCTGGAGGACAACGGAGTaGCCAAAGTCACACTCACTGGAGGCAAGCTACTTCTTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: LCCIYWDFPGWRTTE*PKSHSLEASYFLCL
Trigger: GAGGCACAAGAAGTAGCTTGCCTCCAGTGAGTGTGACTTTGGGCACTCCGTTGTCCTCCAGCCTGGAAAGTCCCAGTAGATACAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596545.5
CDS GCA 90 bp AGGGCTTTACCCTGTGGGCAGAAGGGATTGATATACCTGCACACCTaGACCTCAGCTGTGCTGTATCTACTGGGACTTTCCAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: RALPCGQKGLIYLHT*TSAVLYLLGLSRLE
Trigger: CTCCAGCCTGGAAAGTCCCAGTAGATACAGCACAGCTGAGGTGCAGGTGTGCAGGTATATCAATCCCTTCTGCCCACAGGGTAAAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596545.5
CDS CCA 90 bp AGTTCGTGCAGCTTCTGGAAATTCTCCATCTTGATCATCGTACCGTaGAGCTGTGCCACCATCTCCGTGATCTCTGCCAAAGCGGCTCGG +
Preference number: 5 (lower is better)
Translates to: SSCSFWKFSILIIVP*SCATISVISAKAAR
Trigger: CCGAGCCGCTTTGGCAGAGATCACGGAGATGGTGGCACAGCTCCACGGTACGATGATCAAGATGGAGAATTTCCAGAAGCTGCACGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000423063.2
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS-3UTR CAA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTAGAGTTCTTCTTGGAGTaGTGTGTGGTCAGGCGGAAA +
Preference number: 5 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLEFFLE*CVVRRK
Trigger: TTTCCGCCTGACCACACACAACTCCAAGAAGAACTC...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTACTAGAATTCCCGTGTaGGCAACGGCCAGATTGATC +
Preference number: 5 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCATRIPV*ATARLI
Trigger: GATCAATCTGGCCGTTGCCAACACGGGAATTCTAGT...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATAAGGGAGAGGCCTGCTaGGTGTCGGGGCTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYKGEAC*VSGLRL
Trigger: CAACCTGAGCCCCGACACCAAGCAGGCCTCTCCCTT...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCGACATCGCCGATTCTTaGGTAATCTCTGATTTGGGC +
Preference number: 5 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSDIADS*VISDLG
Trigger: GCCCAAATCAGAGATTACCAAAGAATCGGCGATGTC...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCACTCGGCGGGTGGTGTTaGCACAGCCGCTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPLGGWC*HSRSRT
Trigger: GGTCCTGGAGCGGCTGTGCAAACACCACCCGCCGAG...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCACTCGGCGGGTGGTGTTaGCACAGCCGCTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPLGGWC*HSRSRT
Trigger: GGTCCTGGAGCGGCTGTGCAAACACCACCCGCCGAG...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTAGCACCAAGAAGTAGGTaGGGAACAGGTGTTTTCAGG +
Preference number: 5 (lower is better)
Translates to: VGAKATGNRVPCAVRLTLAPRSR*GTGVFR
Trigger: CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGC...TAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTGGCCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGCACTGGATCTCGGCTTaGCTTAACAGAAAACAACCC +
Preference number: 5 (lower is better)
Translates to: ILALAKEQRPQRMPGLEVHWISA*LNRKQP
Trigger: GGGTTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTG...CACCTCCAGTCCTGGCATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGCCCGGAGCTGTTTGTTaGCTCTGCCCCTGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLPGAVC*LCPCLE
Trigger: CTCCAGGCAGGGGCAGAGCAAACAAACAGCTCCGGG...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGGTGGCCCGGAGCTGTTaGTTTGCTCTGCCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: RNDNVLILALAKEQRPQRVARSC*FALPLP
Trigger: AGGCAGGGGCAGAGCAAACAAACAGCTCCGGGCCAC...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp GCTTGGCTGTGGTACCCACTTCTTCCTTCCCTGCTCCTGAAGCTCCCACTGAGCTGGGTTCTGATTTTCTaGGAAGTGCATCTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: AWLWYPLLPSLLLKLPLSWVLIF*EVHLPS
Trigger: GGAAGGCAGATGCACTTCCAAGAAAATCAGAACCCA...GCTCAGTGGGAGCTTCAGGAGCAGGGAAGGAAGAAGTGGGTACCACAGCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGGCTGTGGGACCTTGCTaGGCGAGGGGGAAAATCTCT +
Preference number: 5 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWAVGPC*ARGKIS
Trigger: AGAGATTTTCCCCCTCGCCAAGCAAGGTCCCACAGC...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTGGAAGGGGCCTATGCTaGCTAGGCAGGCAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLGRGLC*LGRQPV
Trigger: CACTGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCC...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTTATGCTCTTACGGGCTaGGCTAACAGAGAGCCAATA +
Preference number: 5 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVYALTG*ANREPI
Trigger: TATTGGCTCTCTGTTAGCCAAGCCCGTAAGAGCATA...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTAGCACCAGGCCACTTTaGATCTGTGATGTCTACAAC +
Preference number: 5 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVSTRPL*ICDVYN
Trigger: GTTGTAGACATCACAGATCAAAAGTGGCCTGGTGCT...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 90 bp TGTGATCAGGAAACTCGAGGCCAAAATAGTCACCTTCCACGAGGTTaGGGTGGTTGCAAACTGCATCCAGCAGCACCTTCCCAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: CDQETRGQNSHLPRG*GGCKLHPAAPSQEL
Trigger: GAGCTCCTGGGAAGGTGCTGCTGGATGCAGTTTGCAACCACCTCAACCTCGTGGAAGGTGACTATTTTGGCCTCGAGTTTCCTGATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000319562.11
ENST00000595380.5
ENST00000595437.5
ENST00000595817.5
ENST00000596467.5
ENST00000596580.2
ENST00000596613.5
ENST00000598389.5
ENST00000599040.5
ENST00000600032.5
ENST00000601133.5
ENST00000601853.5
ENST00000602263.5
ENST00000627049.2
CDS GCA 90 bp TTGCAAGGGTCTCTCTTCAAAAGGTTCAAATGTAAGTCCCTCCGATaGCTCCTTTCTGCTCCCCGCGCAGTGCATAGTGAGGCCACTGCT +
Preference number: 5 (lower is better)
Translates to: LQGSLFKRFKCKSLR*LLSAPRAVHSEATA
Trigger: AGCAGTGGCCTCACTATGCACTGCGCGGGGAGCAGAAAGGAGGCATCGGAGGGACTTACATTTGAACCTTTTGAAGAGAGACCCTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423063.2
CDS CCA 90 bp CCTCTCCAAACTTCTCAATTAGATGTGAATGGTGCTTGGGCTTCATaGAGCATCTCAGTACCCAACCCGTCCAGGAGGAGCCGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: PLQTSQLDVNGAWAS*SISVPNPSRRSRWL
Trigger: AAGCCACCGGCTCCTCCTGGACGGGTTGGGTACTGAGATGCTCCATGAAGCCCAAGCACCATTCACATCTAATTGAGAAGTTTGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS CCA 90 bp CTGAAACGCAACGTTCATCCTCTTCCTCATACTTCGTGTCAATGTTaGCTCTTACGTCGTTTCTCTGTGAAGTCGCCCACGGCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: LKRNVHPLPHTSCQC*LLRRFSVKSPTAPG
Trigger: GCCCGGAGCCGTGGGCGACTTCACAGAGAAACGACGTAAGAGCCAACATTGACACGAAGTATGAGGAAGAGGATGAACGTTGCGTTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS CCA 90 bp AGAGGGATGAGTTTCCGTCACGTGGGTAGAAGCAAGCTTCCTGGGTaGGGGCTAACTGTAAGCGGAGCTTCTCTAGGGATCTTTGCACAA +
Preference number: 5 (lower is better)
Translates to: RGMSFRHVGRSKLPG*GLTVSGASLGIFAQ
Trigger: TTGTGCAAAGATCCCTAGAGAAGCTCCGCTTACAGTTAGCCCCCACCCAGGAAGCTTGCTTCTACCCACGTGACGGAAACTCATCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS-3UTR CAA 90 bp TCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCATCCTCTTCCTCATGTGCCTTCCCTGTCCTaGGCCGGGTGCAACCGGATT +
Preference number: 5 (lower is better)
Translates to: SLPASLKSLKRNVHPLPHVPSLS*AGCNRI
Trigger: AATCCGGTTGCACCCGGCCAAGGACAGGGAAGGCAC...ATGAGGAAGAGGATGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CAA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAACTAGAATTCCCGTGTaGGCAACGGCCAGATTGATC +
Preference number: 5 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAATRIPV*ATARLI
Trigger: GATCAATCTGGCCGTTGCCAACACGGGAATTCTAGT...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCACTAGAATTCCCGTGTaGGCAACGGCCAGATTGATC +
Preference number: 5 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEATRIPV*ATARLI
Trigger: GATCAATCTGGCCGTTGCCAACACGGGAATTCTAGT...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAAAGCGCTTCCTCTaGAAGCTCAGCTTCCGCACC +
Preference number: 5 (lower is better)
Translates to: RPFASCCLFPATPVRAPQRKRFL*KLSFRT
Trigger: GGTGCGGAAGCTGAGCTTCAAGAGGAAGCGCTTTCT...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGGGACGGGCTTGGGCTTaGGTTTGGGCTCTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLGRAWA*VWALQK
Trigger: TTTTTGAAGAGCCCAAACCAAAGCCCAAGCCCGTCC...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTAGCACACGTGCACCATaGTGTTGCCGCGGTGCGGGG +
Preference number: 5 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGISTRAP*CCRGAG
Trigger: CCCCGCACCGCGGCAACACAATGGTGCACGTGTGCT...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TTCCCTGCTCCTGAAGCTCCCACTGAGCGTTCACCCCGATGGCTGCCAAAACCACACCCGTTGCTGTTTTaGAATTTCCTCAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: FPAPEAPTERSPRWLPKPHPLLF*NFLSRF
Trigger: AAACCTGCTGAGGAAATTCAAAAACAGCAACGGGTG...TGGTTTTGGCAGCCATCGGGGTGAACGCTCAGTGGGAGCTTCAGGAGCAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTTTGCCCTGTCTTGTGTaGAACGGATGTGTGTGTACT +
Preference number: 5 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQALPCLV*NGCVCT
Trigger: AGTACACACACATCCGTTCAACACAAGACAGGGCAA...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTCTGGAAAGAATGGGGTaGAATTGGCCCTCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMILERMG*NWPSPP
Trigger: CGGAGGCGAGGGCCAATTCAACCCCATTCTTTCCAG...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCATCCTCTTCCTCATGGCCACCCCAGGAAATaGGCATCTGGCCGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: SLPASLKSLKRNVHPLPHGHPRK*ASGRSL
Trigger: CAAGCTCCGGCCAGATGCCAATTTCCTGGGGTGGCC...ATGAGGAAGAGGATGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CAA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAGGAGCCCTCGGTCACTaGCAGGGGTGCCAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKGALGH*QGCQLP
Trigger: GGGCAGCTGGCACCCCTGCAAGTGACCGAGGGCTCC...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTGTGGACAGATATCATTaGTCAATGAGACGAGCCGAT +
Preference number: 5 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVVDRYH*SMRRAD
Trigger: ATCGGCTCGTCTCATTGACAAATGATATCTGTCCAC...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTCAGAAATTAAGTTGCTaGCCTGGTACAAAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVQKLSC*PGTKPV
Trigger: CACTGGCTTTGTACCAGGCAAGCAACTTAATTTCTG...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTAAAGTGCAAGCCTTGTaGGAAGAGCAAAGTTCACCT +
Preference number: 5 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVKVQAL*EEQSSP
Trigger: AGGTGAACTTTGCTCTTCCAACAAGGCTTGCACTTT...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCCATCATTCTTCCCTCTaGGCCGGTCTGGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASHHSSL*AGLGKL
Trigger: CAGCTTCCCCAGACCGGCCAAGAGGGAAGAATGATG...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 90 bp AGAATAATCTTCCGTCTGGGAAACTTAAAGCTGGGTCTGTGGCTGTaGGGGGATGGGAGGTCTGATGAGCCTGGTTACACCCCCATCCTT +
Preference number: 5 (lower is better)
Translates to: RIIFRLGNLKLGLWL*GDGRSDEPGYTPIL
Trigger: AAGGATGGGGGTGTAACCAGGCTCATCAGACCTCCCATCCCCTCACAGCCACAGACCCAGCTTTAAGTTTCCCAGACGGAAGATTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601361.1
CDS TCA 90 bp ACCAGATGCAATGCTCTAGGGCTTTACCCTGTGGGCAGAAGGGATTaGTATACCTGCACACCTGCACCTCAGCTGTGCTGTATCTACTGG +
Preference number: 5 (lower is better)
Translates to: TRCNALGLYPVGRRD*YTCTPAPQLCCIYW
Trigger: CCAGTAGATACAGCACAGCTGAGGTGCAGGTGTGCAGGTATATCAATCCCTTCTGCCCACAGGGTAAAGCCCTAGAGCATTGCATCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596545.5
CDS TCA 90 bp TCTCTGTCACCAAGGGAACCAGGCCGTGTTCTCAAGGCTCTCACCTaGAACACTAGAATTCCCGTGTTGGCAACGGCCAGATTGATCTTC +
Preference number: 5 (lower is better)
Translates to: SLSPREPGRVLKALT*NTRIPVLATARLIF
Trigger: GAAGATCAATCTGGCCGTTGCCAACACGGGAATTCTAGTGTTTCAGGTGAGAGCCTTGAGAACACGGCCTGGTTCCCTTGGTGACAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596467.5
CDS TCA 90 bp AACAGGATTTCTTACAAGCTATGTTCTGTGGCCATGGTAGAGGGATaGGTTTCCGTCACGTGGGTAGAAGCAAGCTTCCTGGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: NRISYKLCSVAMVEG*VSVTWVEASFLGGG
Trigger: GCCCCCACCCAGGAAGCTTGCTTCTACCCACGTGACGGAAACTCATCCCTCTACCATGGCCACAGAACATAGCTTGTAAGAAATCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS-3UTR CAA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTACTCAGCTTCCGCACCTaGGCCCAGTTGAAGGCATTG +
Preference number: 5 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLLSFRT*AQLKAL
Trigger: CAATGCCTTCAACTGGGCCAAGGTGCGGAAGCTGAG...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTGCATCTGGCCGGAGCTaGATGAGAAAGCGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: QDATPALLIGPKKERAMGASGRS*MRKRFL
Trigger: GAGGAAGCGCTTTCTCATCAAGCTCCGGCCAGATGC...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTCCTGGTACGCACTATaGGCATCTGGCCGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYSWYAL*ASGRSL
Trigger: CAAGCTCCGGCCAGATGCCAATAGTGCGTACCAGGA...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATTCCTGGTACGCACTATaGGCATCTGGCCGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHSWYAL*ASGRSL
Trigger: CAAGCTCCGGCCAGATGCCAATAGTGCGTACCAGGA...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGATTTTCCAGAAGGACTaGCAGAAATCCCGACTGGCC +
Preference number: 5 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLIFQKD*QKSRLA
Trigger: GGCCAGTCGGGATTTCTGCAAGTCCTTCTGGAAAAT...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAGGCTTGGGCTTTGGTTaGGGCTCTTCAAAAAGTCTA +
Preference number: 5 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAAGLGFG*GSSKSL
Trigger: TAGACTTTTTGAAGAGCCCAAACCAAAGCCCAAGCC...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTGTGTCGGGGCTCAGGTaGGGAGACAAGGTCACGTTG +
Preference number: 5 (lower is better)
Translates to: TGNRLVHLVRQMINTRQAVSGLR*GDKVTL
Trigger: CAACGTGACCTTGTCTCCCAACCTGAGCCCCGACAC...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTAAGGGAGAGGCCTGCTaGGTGTCGGGGCTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIKGEAC*VSGLRL
Trigger: CAACCTGAGCCCCGACACCAAGCAGGCCTCTCCCTT...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGAGTACGCTTTATCAGTaGGGAATCTCTTCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLSTLYQ*GISSSG
Trigger: GCCGGAGGAAGAGATTCCCAACTGATAAAGCGTACT...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAAGCCGCCGGGAGCTCTaGATTCCATTCTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPSRREL*IPFSRA
Trigger: GGCCCTGGAGAATGGAATCAAGAGCTCCCGGCGGCT...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GACATCTCCCGTGGGTGTGCCAGTTCTTGTGGAGTTAAGACAGGATTTTTGGAAGGCCCTCGCCTCCGCTaGTTTGAGACTCTCGTTAGA +
Preference number: 5 (lower is better)
Translates to: DISRGCASSCGVKTGFLEGPRLR*FETLVR
Trigger: TCTAACGAGAGTCTCAAACAAGCGGAGGCGAGGGCC...TTCCAAAAATCCTGTCTTAACTCCACAAGAACTGGCACACCCACGGGAGATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTTTTGCAAGTTGCTGTTaGTTTCCAGCTACACCAGTC +
Preference number: 5 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAFASCC*FPATPV
Trigger: GACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAA...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTAAGCCAGGCCCAGCCTTaGAGACGGGTTTACTGTCAC +
Preference number: 5 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLSQAQP*RRVYCH
Trigger: GTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCT...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp GGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTTCCTGGACCTGTGATTaGGAGTCTGTTGTAAAATGG +
Preference number: 5 (lower is better)
Translates to: GNRCFQVSVKPRSGTLCASWTCD*ESVVKW
Trigger: CCATTTTACAACAGACTCCAAATCACAGGTCCAGGA...AGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTATGAAAGCTTGCACTTaGGGGAATAGGATCACTGTA +
Preference number: 5 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVMKACT*GNRITV
Trigger: TACAGTGATCCTATTCCCCAAAGTGCAAGCTTTCAT...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCGACGCTACTCCAGCTTaGCTTATAGGGCCTAAGAAA +
Preference number: 5 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEADATPA*LIGPKK
Trigger: TTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTC...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CCA 90 bp ATGAAGTCTGCAGTCCCTGCCATTACACCATGTAGGCAGTCTCACTaGGGCTTAGCTTCATCATCCCGGACACGTTATGTCAGAGATCTC +
Preference number: 5 (lower is better)
Translates to: MKSAVPAITPCRQSH*GLASSSRTRYVRDL
Trigger: GAGATCTCTGACATAACGTGTCCGGGATGATGAAGCTAAGCCCCAGTGAGACTGCCTACATGGTGTAATGGCAGGGACTGCAGACTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS-3UTR CAA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCATCCAGCATCTGGATTTaGATGGACACGAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAASSIWI*MDTSFP
Trigger: AGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGA...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCACGAGGTTGAGGTGGTaGCAAACTGCATCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFTRLRW*QTASSS
Trigger: GCTGCTGGATGCAGTTTGCAACCACCTCAACCTCGT...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTACACGTCAACCTGCCTaGAGCCAAGTCCTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: QDATPALLIGPKKERAMGTRQPA*SQVLLH
Trigger: GTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTGT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTCGCACCTTGGCCCAGTaGAAGGCATTGATCTTAGTG +
Preference number: 5 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIRTLAQ*KALILV
Trigger: CACTAAGATCAATGCCTTCAACTGGGCCAAGGTGCG...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCATCCTCTTCCTCATCTCAGCTTCCGCACCTaGGCCCAGTTGAAGGCATTG +
Preference number: 5 (lower is better)
Translates to: SLPASLKSLKRNVHPLPHLSFRT*AQLKAL
Trigger: CAATGCCTTCAACTGGGCCAAGGTGCGGAAGCTGAG...ATGAGGAAGAGGATGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CAA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTGCATCTGGCCGGAGCTaGATGAGAAAGCGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: TGNRLVHLVRQMINTRQAASGRS*MRKRFL
Trigger: GAGGAAGCGCTTTCTCATCAAGCTCCGGCCAGATGC...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTGGACGGGCTTGGGCTTaGGTTTGGGCTCTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIGRAWA*VWALQK
Trigger: TTTTTGAAGAGCCCAAACCAAAGCCCAAGCCCGTCC...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACAGGACGGGCTTGGGCTTaGGTTTGGGCTCTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: VHQPRATMLENSPSLRCTGRAWA*VWALQK
Trigger: TTTTTGAAGAGCCCAAACCAAAGCCCAAGCCCGTCC...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTCCCGGAACCACAAGATaGTCAATGCCAATCAAATCT +
Preference number: 5 (lower is better)
Translates to: GKPREWQPPHHHREQADVPGTTR*SMPIKS
Trigger: AGATTTGATTGGCATTGACAATCTTGTGGTTCCGGG...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGTATAGCAGGACGTCGTaGAACAGGAAGAACATGCGC +
Preference number: 5 (lower is better)
Translates to: RPFASCCLFPATPVRAPQYSRTS*NRKNMR
Trigger: GCGCATGTTCTTCCTGTTCAACGACGTCCTGCTATA...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGTTGCCCTGTCTTGTGTaGAACGGATGTGTGTGTACT +
Preference number: 5 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLLPCLV*NGCVCT
Trigger: AGTACACACACATCCGTTCAACACAAGACAGGGCAA...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAAACGATTTGGTCAACTaGCACCAAGAAGTAGGTTGG +
Preference number: 5 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAANDLVN*HQEVGW
Trigger: CCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTT...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGCACTGGATCTCGGCTTaGCTTAACAGAAAACAACCC +
Preference number: 5 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLHWISA*LNRKQP
Trigger: GGGTTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTG...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGAAGAATGGGGTTGAATaGGCCCTCGCCTCCGCTTGT +
Preference number: 5 (lower is better)
Translates to: RNDNVLILALAKEQRPQRKNGVE*ALASAC
Trigger: ACAAGCGGAGGCGAGGGCCAATTCAACCCCATTCTT...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTGCTGAGGAGACTGCCTaGTCCCCAAGTCTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: TGNRLVHLVRQMINTRQAAEETA*SPSLQE
Trigger: TTCCTGGAGACTTGGGGACAAGGCAGTCTCCTCAGC...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTACCTTAAGAGTTATTTaGCTTCTCTGGAAGGGGCCT +
Preference number: 5 (lower is better)
Translates to: GKPREWQPPHHHREQADVTLRVI*LLWKGP
Trigger: AGGCCCCTTCCAGAGAAGCAAAATAACTCTTAAGGT...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAACCTTATGTAACCATTaGTTCTCTGGGAGAGATGCC +
Preference number: 5 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAATLCNH*FSGRDA
Trigger: GGCATCTCTCCCAGAGAACAAATGGTTACATAAGGT...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp GACATCTCCCGTGGGTGTGCCAGTTCTTGTGGAGTTAAGACAGGATTTTTGGAACATCTCTCTGCAGGCTaGGCTGTGGTACCCACTTCT +
Preference number: 5 (lower is better)
Translates to: DISRGCASSCGVKTGFLEHLSAG*AVVPTS
Trigger: AGAAGTGGGTACCACAGCCAAGCCTGCAGAGAGATG...TTCCAAAAATCCTGTCTTAACTCCACAAGAACTGGCACACCCACGGGAGATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGGCATCGTGGCTGGGGTaGACCCTATTTACCCTCGGG +
Preference number: 5 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRASWLG*TLFTLG
Trigger: CCCGAGGGTAAATAGGGTCAACCCCAGCCACGATGC...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCCCGGGATCGGGACGCTaGTTCTCTAAGAAGGTCGTA +
Preference number: 5 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGPGSGR*FSKKVV
Trigger: TACGACCTTCTTAGAGAACAAGCGTCCCGATCCCGG...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GAAAAACAGCTCCTTGGCCATCAGAAGCCAACTGGGACCAAGTCAGGTGAGGCCGACTTGCTGTTTATCTaGCCCACCTTTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: EKQLLGHQKPTGTKSGEADLLFI*PTFSGK
Trigger: CTTTCCAGAAAAGGTGGGCAAGATAAACAGCAAGTC...GGCCTCACCTGACTTGGTCCCAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTAAATATCTCAGAAAATaGCAACGTGCAGCTAAGGCA +
Preference number: 5 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVKYLRK*QRAAKA
Trigger: TGCCTTAGCTGCACGTTGCAATTTTCTGAGATATTT...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCTCAACATTCTGCAATaGCTGCACCTGGCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: QDATPALLIGPKKERAMGLNILQ*LHLAPA
Trigger: TGCTGGGGCCAGGTGCAGCAATTGCAGAATGTTGAG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTCTTCCCGCTTTGGGATaGGGCACAAGCTGCCTGTTA +
Preference number: 5 (lower is better)
Translates to: QDATPALLIGPKKERAMGLPALG*GTSCLL
Trigger: TAACAGGCAGCTTGTGCCCAATCCCAAAGCGGGAAG...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATCTGGGGAAGCTGGGTTaGCAGCATCTTGATCAGCTC +
Preference number: 5 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHLGKLG*QHLDQL
Trigger: GAGCTGATCAAGATGCTGCAAACCCAGCTTCCCCAG...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp AGCAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGAGGCAGTGTTTGGGTTGAGTTAGAACTGCAGTaGTTTCAAGGTACTACACTA +
Preference number: 5 (lower is better)
Translates to: SSGGGDGGGGGGGGSVWVELELQ*FQGTTL
Trigger: TAGTGTAGTACCTTGAAACAACTGCAGTTCTAACTC...AACCCAAACACTGCCTCCACCACCACCACCACCACCATCACCACCACCACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 90 bp CTGCTGAGACTGCTCCAGCACTTCCGAATTCAGTTCTGTAGGCTGTaGAGCAAGGCTCCGGATAGAATGAATCTTGCTGTGCTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: LLRLLQHFRIQFCRL*SKAPDRMNLAVLPF
Trigger: GAAAGGAAGCACAGCAAGATTCATTCTATCCGGAGCCTTGCTTCACAGCCTACAGAACTGAATTCGGAAGTGCTGGAGCAGTCTCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596580.2
ENST00000600190.1
ENST00000627049.2
CDS CCA 90 bp CCCCAATCTCAGATTGCACAATGTGTGAAATCAAGAGAGCTGCGCTaGTGTCATTACACGTCAACCTGCCTTGAGCCAAGTCCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: PQSQIAQCVKSRELR*CHYTSTCLEPSPAS
Trigger: TGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTGTAATGACACCAGCGCAGCTCTCTTGATTTCACACATTGTGCAATCTGAGATTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000595817.5
ENST00000596467.5
ENST00000596580.2
ENST00000598389.5
ENST00000599040.5
ENST00000600032.5
ENST00000601009.1
ENST00000602263.5
ENST00000627049.2
CDS CCA 90 bp GAATTCTGTCCTCTCCAAACTTCTCAATTAGATGTGAATGGTGCTTaGGCTTCATGGAGCATCTCAGTACCCAACCCGTCCAGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: EFCPLQTSQLDVNGA*ASWSISVPNPSRRS
Trigger: GCTCCTCCTGGACGGGTTGGGTACTGAGATGCTCCATGAAGCCCAAGCACCATTCACATCTAATTGAGAAGTTTGGAGAGGACAGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS CCA 90 bp GCCTATCTCCATTGGGTACTGTTTAGAGAAATAGCAGAGTGGAACTaGATGAGTCCGCCAAGAACAGCGCCTTCAAAACCACACACCGCT +
Preference number: 5 (lower is better)
Translates to: AYLHWVLFREIAEWN*MSPPRTAPSKPHTA
Trigger: AGCGGTGTGTGGTTTTGAAGGCGCTGTTCTTGGCGGACTCATCCAGTTCCACTCTGCTATTTCTCTAAACAGTACCCAATGGAGATAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS-3UTR CAA 90 bp TCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCATCCTCTTCCTCATACACGTCAACCTGCCTaGAGCCAAGTCCTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: SLPASLKSLKRNVHPLPHTRQPA*SQVLLH
Trigger: GTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTGT...ATGAGGAAGAGGATGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CAA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAGTGCCTTCCCTGTCCTaGGCCGGGTGCAACCGGATT +
Preference number: 5 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKVPSLS*AGCNRI
Trigger: AATCCGGTTGCACCCGGCCAAGGACAGGGAAGGCAC...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTTTGGCAACGGCCAGATaGATCTTCGTGCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: TGNRLVHLVRQMINTRQALATAR*IFVPSL
Trigger: CAGGGAAGGCACGAAGATCAATCTGGCCGTTGCCAA...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GACATCTCCCGTGGGTGTGCCAGTTCTTGTGGAGTTAAGACAGGATTTTTGGAACGCACCTTGGCCCAGTaGAAGGCATTGATCTTAGTG +
Preference number: 5 (lower is better)
Translates to: DISRGCASSCGVKTGFLERTLAQ*KALILV
Trigger: CACTAAGATCAATGCCTTCAACTGGGCCAAGGTGCG...TTCCAAAAATCCTGTCTTAACTCCACAAGAACTGGCACACCCACGGGAGATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCTCAGCTTCCGCACCTaGGCCCAGTTGAAGGCATTG +
Preference number: 5 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGILSFRT*AQLKAL
Trigger: CAATGCCTTCAACTGGGCCAAGGTGCGGAAGCTGAG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAACTCAGCTTCCGCACCTaGGCCCAGTTGAAGGCATTG +
Preference number: 5 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQLSFRT*AQLKAL
Trigger: CAATGCCTTCAACTGGGCCAAGGTGCGGAAGCTGAG...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGTGGAAATTCTCCATCTaGATCATCGTACCGTGGAGC +
Preference number: 5 (lower is better)
Translates to: RPFASCCLFPATPVRAPQWKFSI*IIVPWS
Trigger: GCTCCACGGTACGATGATCAAGATGGAGAATTTCCA...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGTGGAAATTCTCCATCTaGATCATCGTACCGTGGAGC +
Preference number: 5 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVWKFSI*IIVPWS
Trigger: GCTCCACGGTACGATGATCAAGATGGAGAATTTCCA...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATGTGACAGTCCAGGTATaGCACTGGATCTCGGCTTTG +
Preference number: 5 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYVTVQV*HWISAL
Trigger: CAAAGCCGAGATCCAGTGCAATACCTGGACTGTCAC...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGCTCGCCTCCGCTTGTTaGAGACTCTCGTTAGAAAGG +
Preference number: 5 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLLASAC*RLSLER
Trigger: CCTTTCTAACGAGAGTCTCAAACAAGCGGAGGCGAG...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGTCGTCCGTTTGCAAGTaGCTGTTTGTTTCCAGCTAC +
Preference number: 5 (lower is better)
Translates to: RPFASCCLFPATPVRAPQSSVCK*LFVSSY
Trigger: GTAGCTGGAAACAAACAGCAACTTGCAAACGGACGA...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGAGGCTCTTCGTCCGTTaGCAAGTTGCTGTTTGTTTC +
Preference number: 5 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWRLFVR*QVAVCF
Trigger: GAAACAAACAGCAACTTGCAAACGGACGAAGAGCCT...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CAGGTGCCGGGGACTACGTACCATGATTTCATAGTGCTCTGCAGCCAGCAGGCTCATCAATATGCTGGATaGTGGCGTGAGGTATTTTTA +
Preference number: 5 (lower is better)
Translates to: QVPGTTYHDFIVLCSQQAHQYAG*WREVFL
Trigger: TAAAAATACCTCACGCCACAATCCAGCATATTGATG...AGCCTGCTGGCTGCAGAGCACTATGAAATCATGGTACGTAGTCCCCGGCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGCGAGTATCTGCATCATaGTGTGTCTCATGTGTAGTG +
Preference number: 5 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLRVSAS*CVSCVV
Trigger: CACTACACATGAGACACACAATGATGCAGATACTCG...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCACAAGGAAGCTGGCTTTaGTGTCGCCACTTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPQGSWL*CRHFQA
Trigger: GGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTTG...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTGCGAATCACACAGATaGAGTCTGTGTTCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYCESHR*SLCSPG
Trigger: CCCTGGGGAACACAGACTCAATCTGTGTGATTCGCA...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGTGCTTGAGTGGGTTATaGTGTCGGTTTGCTAGTGCA +
Preference number: 5 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVCLSGL*CRFASA
Trigger: TGCACTAGCAAACCGACACAATAACCCACTCAAGCA...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTAGTTTGCTGTGGGACCTaGCTTGGCGAGGGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: KMGFLPSHRECICIPGILVCCGT*LGEGEN
Trigger: ATTTTCCCCCTCGCCAAGCAAGGTCCCACAGCAAAC...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCATTTGCTCCAAACATGTaGTTTCAGTGGATGGCTGTA +
Preference number: 5 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAAFAPNM*FQWMAV
Trigger: TACAGCCATCCACTGAAACAACATGTTTGGAGCAAA...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCCCTCATAATTGTCATTaGTTTGGGACCGGGACCGGG +
Preference number: 5 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGPHNCH*FGTGTG
Trigger: CCCGGTCCCGGTCCCAAACAAATGACAATTATGAGG...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTGGCCTGGGTCCCCTATaGAGTCAGGAGACCCCTACA +
Preference number: 5 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFGLGPL*SQETPT
Trigger: TGTAGGGGTCTCCTGACTCAATAGGGGACCCAGGCC...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACGTCTGATATCTAAGTaGGGGCTCAGTGGAATACGC +
Preference number: 5 (lower is better)
Translates to: VHQPRATMLENSPSLRCTRLISK*GLSGIR
Trigger: GCGTATTCCACTGAGCCCCAACTTAGATATCAGACG...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCTGGGTTTGCAGCATCTaGATCAGCTCTTCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGWVCSI*ISSSAE
Trigger: CTCTGCCGAAGAGCTGATCAAGATGCTGCAAACCCA...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 90 bp TGTCATCTTCCATCATATGCAGGCGAAGTTCTTCAACCTTGTCTCTaGAGCACAGCTTTTCCCCAAGAACCGATCCAGCAGATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: CHLPSYAGEVLQPCL*STAFPQEPIQQIQA
Trigger: AGCCTGGATCTGCTGGATCGGTTCTTGGGGAAAAGCTGTGCTTCAGAGACAAGGTTGAAGAACTTCGCCTGCATATGATGGAAGATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427404.5
CDS TCA 90 bp ACCCAGCTCTCAACCCAGCTCTCGAGCTCAGTCCAGGATCAGATTTaGGAATGGCTCTCCTCTAGGTTCCTTTTTCAGGTGATGTTGTTT +
Preference number: 5 (lower is better)
Translates to: TQLSTQLSSSVQDQI*EWLSSRFLFQVMLF
Trigger: AAACAACATCACCTGAAAAAGGAACCTAGAGGAGAGCCATTCTCAAATCTGATCCTGGACTGAGCTCGAGAGCTGGGTTGAGAGCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS TCA 90 bp TGCAAGGCTGGACCCTTTGTCACAATAATAGCAAAATCCCAACTTTaGTCAACCCAGCTCTCAACCCAGCTCTCGAGCTCAGTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: CKAGPFVTIIAKSQL*STQLSTQLSSSVQD
Trigger: ATCCTGGACTGAGCTCGAGAGCTGGGTTGAGAGCTGGGTTGATCAAAGTTGGGATTTTGCTATTATTGTGACAAAGGGTCCAGCCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS TCA 90 bp AAAATAACCATCAGAGGTCTTAGCCCACTGAATATGAATCAGAGTTaGAGGGCCAGCTCTTCTCTCTCTGTCACCAAGGGAACCAGGCCG +
Preference number: 5 (lower is better)
Translates to: KITIRGLSPLNMNQS*RASSSLSVTKGTRP
Trigger: CGGCCTGGTTCCCTTGGTGACAGAGAGAGAAGAGCTGGCCCTTCAACTCTGATTCATATTCAGTGGGCTAAGACCTCTGATGGTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596467.5
CDS TCA 90 bp CTCCGGGGTAAATGCTACCTGGCTAAGGATGAGTGGATCTGTCTCTaGCTTATTACATCTACCAGGAAGATTCCGCATGTATGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: LRGKCYLAKDEWICL*LITSTRKIPHVWPW
Trigger: CCAAGGCCATACATGCGGAATCTTCCTGGTAGATGTAATAAGTCAGAGACAGATCCACTCATCCTTAGCCAGGTAGCATTTACCCCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 90 bp GTGAGAATTCTGTCCTCTCCAAACTTCTCAATTAGATGTGAATGGTaGTTGGGCTTCATGGAGCATCTCAGTACCCAACCCGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: VRILSSPNFSIRCEW*LGFMEHLSTQPVQE
Trigger: CTCCTGGACGGGTTGGGTACTGAGATGCTCCATGAAGCCCAAGCACCATTCACATCTAATTGAGAAGTTTGGAGAGGACAGAATTCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS GCA 90 bp TCCCCAAATTACCTGGCCTTGTCCCAGGCCTTTCAGGATCTGGACTaGAAGGCTGGACCCTTTGTCACAATAATAGCAAAATCCCAACTT +
Preference number: 5 (lower is better)
Translates to: SPNYLALSQAFQDLD*KAGPFVTIIAKSQL
Trigger: AAGTTGGGATTTTGCTATTATTGTGACAAAGGGTCCAGCCTTGCAGTCCAGATCCTGAAAGGCCTGGGACAAGGCCAGGTAATTTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 90 bp CTTCACTTCCCCTCCTTCCCTAACTGGGAGAGATGCAGGGTTGCTTaGCTAGCCAGGACTAAAAGCAATCCTGACAGACTCTGTATTTTT +
Preference number: 5 (lower is better)
Translates to: LHFPSFPNWERCRVA*LARTKSNPDRLCIF
Trigger: AAAAATACAGAGTCTGTCAGGATTGCTTTTAGTCCTGGCTAGCCAAGCAACCCTGCATCTCTCCCAGTTAGGGAAGGAGGGGAAGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600190.1
CDS CCA 90 bp CAGCTTGTCCTTATTGCACAATGTGTGAAATCAAGAGAGCTGCGCTaGTGTCATTACACGTCAACCTGCCTTGAGCCAAGTCCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: QLVLIAQCVKSRELR*CHYTSTCLEPSPAS
Trigger: TGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTGTAATGACACCAGCGCAGCTCTCTTGATTTCACACATTGTGCAATAAGGACAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601853.5
CDS CCA 90 bp ACAAATCCCAGGCCTTGCTCGATTTTCAGACATGACCACCCAGTTTaGTCCAATAAACATTTACTTGGCATCCAGTGCTCAGTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: TNPRPCSIFRHDHPV*SNKHLLGIQCSVAG
Trigger: CCCTGCCACTGAGCACTGGATGCCAAGTAAATGTTTATTGGACCAAACTGGGTGGTCATGTCTGAAAATCGAGCAAGGCCTGGGATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS-3UTR CAA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATCTTCCCAGGAGCTCTTaGTGGAACTTCAAATGCCTC +
Preference number: 5 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYLPRSS*WNFKCL
Trigger: GAGGCATTTGAAGTTCCACAAAGAGCTCCTGGGAAG...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGCTTCCCAGGAGCTCTTaGTGGAACTTCAAATGCCTC +
Preference number: 5 (lower is better)
Translates to: RNDNVLILALAKEQRPQRLPRSS*WNFKCL
Trigger: GAGGCATTTGAAGTTCCACAAAGAGCTCCTGGGAAG...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAACGAGGTTGAGGTGGTaGCAAACTGCATCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPTRLRW*QTASSS
Trigger: GCTGCTGGATGCAGTTTGCAACCACCTCAACCTCGT...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTACGAGGTTGAGGTGGTaGCAAACTGCATCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGITRLRW*QTASSS
Trigger: GCTGCTGGATGCAGTTTGCAACCACCTCAACCTCGT...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGGAGTTCTTCTTGGAGTaGTGTGTGGTCAGGCGGAAA +
Preference number: 5 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLEFFLE*CVVRRK
Trigger: TTTCCGCCTGACCACACACAACTCCAAGAAGAACTC...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTACACGTCAACCTGCCTaGAGCCAAGTCCTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGITRQPA*SQVLLH
Trigger: GTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTGT...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAACACGTCAACCTGCCTaGAGCCAAGTCCTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPTRQPA*SQVLLH
Trigger: GTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTGT...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGTTGGCAACGGCCAGATaGATCTTCGTGCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRLATAR*IFVPSL
Trigger: CAGGGAAGGCACGAAGATCAATCTGGCCGTTGCCAA...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCATCCTCTTCCTCATCGCACCTTGGCCCAGTaGAAGGCATTGATCTTAGTG +
Preference number: 5 (lower is better)
Translates to: SLPASLKSLKRNVHPLPHRTLAQ*KALILV
Trigger: CACTAAGATCAATGCCTTCAACTGGGCCAAGGTGCG...ATGAGGAAGAGGATGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CAA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGAGAAAGCGCTTCCTCTaGAAGCTCAGCTTCCGCACC +
Preference number: 5 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRRKRFL*KLSFRT
Trigger: GGTGCGGAAGCTGAGCTTCAAGAGGAAGCGCTTTCT...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATATTTTCCAGAAGGACTaGCAGAAATCCCGACTGGCC +
Preference number: 5 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHIFQKD*QKSRLA
Trigger: GGCCAGTCGGGATTTCTGCAAGTCCTTCTGGAAAAT...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCACTAAAGAGGACGGGCTaGGGCTTTGGTTTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPLKRTG*GFGLGS
Trigger: AGAGCCCAAACCAAAGCCCAAGCCCGTCCTCTTTAG...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAACTAAAGAGGACGGGCTaGGGCTTTGGTTTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQLKRTG*GFGLGS
Trigger: AGAGCCCAAACCAAAGCCCAAGCCCGTCCTCTTTAG...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATAGTACGCTTTATCAGTaGGGAATCTCTTCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYSTLYQ*GISSSG
Trigger: GCCGGAGGAAGAGATTCCCAACTGATAAAGCGTACT...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGTATAGCAGGACGTCGTaGAACAGGAAGAACATGCGC +
Preference number: 5 (lower is better)
Translates to: RNDNVLILALAKEQRPQRYSRTS*NRKNMR
Trigger: GCGCATGTTCTTCCTGTTCAACGACGTCCTGCTATA...CCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATTGTCATTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGCACCCGTTGCTGTTTTaGAATTTCCTCAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: RPFASCCLFPATPVRAPQHPLLF*NFLSRF
Trigger: AAACCTGCTGAGGAAATTCAAAAACAGCAACGGGTG...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTTTGCCCTGTCTTGTGTaGAACGGATGTGTGTGTACT +
Preference number: 5 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMILPCLV*NGCVCT
Trigger: AGTACACACACATCCGTTCAACACAAGACAGGGCAA...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATGCACCAAGAAGTAGGTaGGGAACAGGTGTTTTCAGG +
Preference number: 5 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYAPRSR*GTGVFR
Trigger: CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGC...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGAACGATTTGGTCAACTaGCACCAAGAAGTAGGTTGG +
Preference number: 5 (lower is better)
Translates to: CKLLFVSSYTSQSSTERVNDLVN*HQEVGW
Trigger: CCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTT...CACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GGAAAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTAGTTTCAAACCACAGTaGCAGGAGGATATAGGAATA +
Preference number: 5 (lower is better)
Translates to: GKPREWQPPHHHREQADVSFKPQ*QEDIGI
Trigger: TATTCCTATATCCTCCTGCAACTGTGGTTTGAAACT...AACGTCTGCCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGAAGAATGGGGTTGAATaGGCCCTCGCCTCCGCTTGT +
Preference number: 5 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRKNGVE*ALASAC
Trigger: ACAAGCGGAGGCGAGGGCCAATTCAACCCCATTCTT...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTAGGCTCTTCGTCCGTTaGCAAGTTGCTGTTTGTTTC +
Preference number: 5 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIRLFVR*QVAVCF
Trigger: GAAACAAACAGCAACTTGCAAACGGACGAAGAGCCT...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGAGGTATTTTACATTTTaGGAGGGACCGTCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLRYFTF*EGPSLE
Trigger: CTCCAAAGACGGTCCCTCCAAAAATGTAAAATACCT...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCAACTCATATTTGGACTaGAACTGCTGCTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASNSYLD*NCCCWE
Trigger: CTCCCAGCAGCAGCAGTTCAAGTCCAAATATGAGTT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCTTCCGAAACATAGCCTaGAGACCCAGTTCTGTCCCA +
Preference number: 5 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFFRNIA*RPSSVP
Trigger: TGGGACAGAACTGGGTCTCAAGGCTATGTTTCGGAA...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTTCTCGTGACCCCAGGTaGCTCGGGCTGAAGACTTGG +
Preference number: 5 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVSRDPR*LGLKTW
Trigger: CCAAGTCTTCAGCCCGAGCAACCTGGGGTCACGAGA...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTGCCTTTCTTCCCGCTTaGGGATTGGGCACAAGCTGC +
Preference number: 5 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFAFLPA*GLGTSC
Trigger: GCAGCTTGTGCCCAATCCCAAAGCGGGAAGAAAGGC...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTCAACAGCGAGCACCCTaGCTGCACTGCACCTGGGAA +
Preference number: 5 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALQQRAP*LHCTWE
Trigger: TTCCCAGGTGCAGTGCAGCAAGGGTGCTCGCTGTTG...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 90 bp CCAGTTGGTGGGGAACATCAGAAGGGCCAGATCTCAGAGACGGGATaGCAGGATACATTTATCAATTGTGGTGATGTGAGAAGACAGTTT +
Preference number: 5 (lower is better)
Translates to: PVGGEHQKGQISETG*QDTFINCGDVRRQF
Trigger: AAACTGTCTTCTCACATCACCACAATTGATAAATGTATCCTGGCATCCCGTCTCTGAGATCTGGCCCTTCTGATGTTCCCCACCAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490389.1
CDS GCA 90 bp AACACTGATCACCAATCTTATCTTCACCACTTTGCTACAGCAATGTaGCCTGTTTCCGACACACAGGGTCAGACAAGCATTTCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: NTDHQSYLHHFATAM*PVSDTQGQTSISQV
Trigger: GACCTGGGAAATGCTTGTCTGACCCTGTGTGTCGGAAACAGGGCACATTGCTGTAGCAAAGTGGTGAAGATAAGATTGGTGATCAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602263.5
CDS GCA 90 bp AGGTGGTTGCAAACTGCATCCAGCAGCACCTTCCCAGGAGCTCTTTaGACTTTCTACACACAAAAGACAACATCTTCTTCTAACGCTCCT +
Preference number: 5 (lower is better)
Translates to: RWLQTASSSTFPGAL*TFYTQKTTSSSNAP
Trigger: AGGAGCGTTAGAAGAAGATGTTGTCTTTTGTGTGTAGAAAGTGCAAAGAGCTCCTGGGAAGGTGCTGCTGGATGCAGTTTGCAACCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596613.5
CDS CCA 90 bp TGCAGCGCGAACAGGTACCTTGTGAGTTCTTCTTGGAGTTGTGTGTaGTCAGGCGGAAAGAATTTCACCACAAACTTAACAACAACGTGC +
Preference number: 5 (lower is better)
Translates to: CSANRYLVSSSWSCV*SGGKNFTTNLTTTC
Trigger: GCACGTTGTTGTTAAGTTTGTGGTGAAATTCTTTCCGCCTGACCACACACAACTCCAAGAAGAACTCACAAGGTACCTGTTCGCGCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000595817.5
ENST00000596467.5
ENST00000596580.2
ENST00000596613.5
ENST00000598389.5
ENST00000599040.5
ENST00000600032.5
ENST00000601853.5
ENST00000602263.5
ENST00000627049.2
CDS CCA 90 bp TTACCTGGCCTTGTCCCAGGCCTTTCAGGATCTGGACTGCAAGGCTaGACCCTTTGTCACAATAATAGCAAAATCCCAACTTTGATCAAC +
Preference number: 5 (lower is better)
Translates to: LPGLVPGLSGSGLQG*TLCHNNSKIPTLIN
Trigger: GTTGATCAAAGTTGGGATTTTGCTATTATTGTGACAAAGGGTCCAGCCTTGCAGTCCAGATCCTGAAAGGCCTGGGACAAGGCCAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 90 bp AACTTTAAATCCAAACCCTGGGGAGCTGGAACAAGGCTTTCATTCTaGGGCAAAGTAGCTAAATGTTTAGGCCTGCCCATCGGTTCTGAC +
Preference number: 5 (lower is better)
Translates to: NFKSKPWGAGTRLSF*GKVAKCLGLPIGSD
Trigger: GTCAGAACCGATGGGCAGGCCTAAACATTTAGCTACTTTGCCCCAGAATGAAAGCCTTGTTCCAGCTCCCCAGGGTTTGGATTTAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596545.5
CDS-3UTR CAA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACATCCAGCATCTGGATTTaGATGGACACGAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: VHQPRATMLENSPSLRCTSSIWI*MDTSFP
Trigger: AGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGA...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTGTGCCTTCCCTGTCCTaGGCCGGGTGCAACCGGATT +
Preference number: 5 (lower is better)
Translates to: YASLESYCVIMYGSMFTFVPSLS*AGCNRI
Trigger: AATCCGGTTGCACCCGGCCAAGGACAGGGAAGGCAC...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACGTGCCTTCCCTGTCCTaGGCCGGGTGCAACCGGATT +
Preference number: 5 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNVPSLS*AGCNRI
Trigger: AATCCGGTTGCACCCGGCCAAGGACAGGGAAGGCAC...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp AAAACCCAGATACTGAAAGTCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAATTGGCAACGGCCAGATaGATCTTCGTGCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: KTQILKVPSCLLKITETQLATAR*IFVPSL
Trigger: CAGGGAAGGCACGAAGATCAATCTGGCCGTTGCCAA...TTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGACTTTCAGTATCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CAA 90 bp TCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAACGTTCATCCTCTTCCTCATACTAGAATTCCCGTGTaGGCAACGGCCAGATTGATC +
Preference number: 5 (lower is better)
Translates to: SLPASLKSLKRNVHPLPHTRIPV*ATARLI
Trigger: GATCAATCTGGCCGTTGCCAACACGGGAATTCTAGT...ATGAGGAAGAGGATGAACGTTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CAA 90 bp CTTAAAATCACTGAAACGCAACGTTCATCCTCTTCCTCATACTTCGTGTCAATGGCATCTGGCCGGAGCTaGATGAGAAAGCGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LKITETQRSSSSSYFVSMASGRS*MRKRFL
Trigger: GAGGAAGCGCTTTCTCATCAAGCTCCGGCCAGATGC...CATTGACACGAAGTATGAGGAAGAGGATGAACGTTGCGTTTCAGTGATTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CAA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTGGCTTGGGCTTTGGTTaGGGCTCTTCAAAAAGTCTA +
Preference number: 5 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLGLGFG*GSSKSL
Trigger: TAGACTTTTTGAAGAGCCCAAACCAAAGCCCAAGCC...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATGGCTTGGGCTTTGGTTaGGGCTCTTCAAAAAGTCTA +
Preference number: 5 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHGLGFG*GSSKSL
Trigger: TAGACTTTTTGAAGAGCCCAAACCAAAGCCCAAGCC...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTAAGGGAGAGGCCTGCTaGGTGTCGGGGCTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: YASLESYCVIMYGSMFTFKGEAC*VSGLRL
Trigger: CAACCTGAGCCCCGACACCAAGCAGGCCTCTCCCTT...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGAGTTTCAAACCACAGTaGCAGGAGGATATAGGAATA +
Preference number: 5 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLSFKPQ*QEDIGI
Trigger: TATTCCTATATCCTCCTGCAACTGTGGTTTGAAACT...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCACTCGCCTCCGCTTGTTaGAGACTCTCGTTAGAAAGG +
Preference number: 5 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPLASAC*RLSLER
Trigger: CCTTTCTAACGAGAGTCTCAAACAAGCGGAGGCGAG...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp AACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAGTATTTTTATTCCCTTaGTTAGTACTGGAAACCGTC +
Preference number: 5 (lower is better)
Translates to: NRCFQVSVKPRSGTLCAAVFLFP*LVLETV
Trigger: GACGGTTTCCAGTACTAACAAAGGGAATAAAAATAC...TGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTGAAAACACCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTGGTTATTGTGTCGGTTaGCTAGTGCAGTCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIGYCVG*LVQSGF
Trigger: AAAACCAGACTGCACTAGCAAACCGACACAATAACC...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTCTGAGCTACAGATGCTaGAGTGGGTTATTGTGTCGG +
Preference number: 5 (lower is better)
Translates to: TGNRLVHLVRQMINTRQALSYRC*SGLLCR
Trigger: CCGACACAATAACCCACTCAAGCATCTGTAGCTCAG...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATCTTTGTGCAGACACGTaGTTCCTGCTTTGGACCATA +
Preference number: 5 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYLCADT*FLLWTI
Trigger: TATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAG...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp GGCCCCTCTGTATGCAGCTTCACGTATCTGAGATCACATCTGTATCTACTCCTAAGGATGAGGACACCATaGGAACTTCAAATGCCTCCT +
Preference number: 5 (lower is better)
Translates to: GPSVCSFTYLRSHLYLLLRMRTP*ELQMPP
Trigger: AGGAGGCATTTGAAGTTCCAATGGTGTCCTCATCCT...TAGGAGTAGATACAGATGTGATCTCAGATACGTGAAGCTGCATACAGAGGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR CAA 90 bp GCACTAGCAATAAACCAAATCCCTCTCTTTGGTCTAATTTATGGCTGGAATAGAGAGGAGCCGGTGGCTTaGAGGAAGGAGGATGAGGAC +
Preference number: 5 (lower is better)
Translates to: ALAINQIPLFGLIYGWNREEPVA*RKEDED
Trigger: GTCCTCATCCTCCTTCCTCAAAGCCACCGGCTCCTC...TCTATTCCAGCCATAAATTAGACCAAAGAGAGGGATTTGGTTTATTGCTAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR CAA 90 bp TTGGCCTTCCATGCTCAAAGAACCACCAAGCTCATTGTTACTGGAGAAGCCAGCAGAAGAAATGAAGGTTaGCCCAGAAGAACCTCTGAG +
Preference number: 5 (lower is better)
Translates to: LAFHAQRTTKLIVTGEASRRNEG*PRRTSE
Trigger: CTCAGAGGTTCTTCTGGGCAAACCTTCATTTCTTCT...GCTGGCTTCTCCAGTAACAATGAGCTTGGTGGTTCTTTGAGCATGGAAGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCATTGTCCTAGAAAGATaGGTTGAGAGGTCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACIVLER*VERSQE
Trigger: TTCCTGAGACCTCTCAACCAATCTTTCTAGGACAAT...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTGTGAGAACCTACATGTaGGGTGCCCACCAAAATGAA +
Preference number: 5 (lower is better)
Translates to: QDATPALLIGPKKERAMGVRTYM*GAHQNE
Trigger: TTCATTTTGGTGGGCACCCAACATGTAGGTTCTCAC...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTAGGCCCCTTCTCTCTTaGCAAGATAAACAATCCGAG +
Preference number: 5 (lower is better)
Translates to: QDATPALLIGPKKERAMGRPLLS*QDKQSE
Trigger: CTCGGATTGTTTATCTTGCAAAGAGAGAAGGGGCCT...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTGCATTCACCTCATCATaGAAAGAGTTGGAGCCGAGA +
Preference number: 5 (lower is better)
Translates to: QDATPALLIGPKKERAMGAFTSS*KELEPR
Trigger: TCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGC...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 90 bp AGGAACAGTCTTAGGCCTGACTGTTGCATTTCTTTCTTGGCTAAATaGAGTCTGCAGTCCCTGCCATTACACCATGTAGGCAGTCTCACT +
Preference number: 5 (lower is better)
Translates to: RNSLRPDCCISFLAK*SLQSLPLHHVGSLT
Trigger: AGTGAGACTGCCTACATGGTGTAATGGCAGGGACTGCAGACTTCATTTAGCCAAGAAAGAAATGCAACAGTCAGGCCTAAGACTGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS TCA 90 bp TGTCATCTTCCATCATATGCAGGCGAAGTTCTTCAACCTTGTCTCTaGAGCACAGCTTTTCCCCAAGAACCGATACACTGCCGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: CHLPSYAGEVLQPCL*STAFPQEPIHCRLS
Trigger: AGAAAGACGGCAGTGTATCGGTTCTTGGGGAAAAGCTGTGCTTCAGAGACAAGGTTGAAGAACTTCGCCTGCATATGATGGAAGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593990.1
CDS-3UTR CAA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAATTGGCAACGGCCAGATaGATCTTCGTGCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKLATAR*IFVPSL
Trigger: CAGGGAAGGCACGAAGATCAATCTGGCCGTTGCCAA...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTAGAAAGCGCTTCCTCTaGAAGCTCAGCTTCCGCACC +
Preference number: 5 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALRKRFL*KLSFRT
Trigger: GGTGCGGAAGCTGAGCTTCAAGAGGAAGCGCTTTCT...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CTTAAAATCACTGAAACGCAACGTTCATCCTCTTCCTCATACTTCGTGTCAATGAGAAAGCGCTTCCTCTaGAAGCTCAGCTTCCGCACC +
Preference number: 5 (lower is better)
Translates to: LKITETQRSSSSSYFVSMRKRFL*KLSFRT
Trigger: GGTGCGGAAGCTGAGCTTCAAGAGGAAGCGCTTTCT...CATTGACACGAAGTATGAGGAAGAGGATGAACGTTGCGTTTCAGTGATTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CAA 90 bp GGGGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTACCAATCAAATCTTTCTaGAGTTCGTGCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GAGWREDVIWHSRNDNVLPIKSF*SSCSFW
Trigger: CCAGAAGCTGCACGAACTCAAGAAAGATTTGATTGG...TAAAACATTGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATCCAATCAAATCTTTCTaGAGTTCGTGCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYPIKSF*SSCSFW
Trigger: CCAGAAGCTGCACGAACTCAAGAAAGATTTGATTGG...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GGCTTAGACTTCCTGCCAGTTTTGCTCCAAACATGTTGTTTCAGTGGATGGCTGCCCGGAACCACAAGATaGTCAATGCCAATCAAATCT +
Preference number: 5 (lower is better)
Translates to: GLDFLPVLLQTCCFSGWLPGTTR*SMPIKS
Trigger: AGATTTGATTGGCATTGACAATCTTGTGGTTCCGGG...CAGCCATCCACTGAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTCTAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCATATAGCAGGACGTCGTaGAACAGGAAGAACATGCGC +
Preference number: 5 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPYSRTS*NRKNMR
Trigger: GCGCATGTTCTTCCTGTTCAACGACGTCCTGCTATA...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ATGCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGTGGGAAGCCATGTTTTaGATTTTCAGACAGGTGTTA +
Preference number: 5 (lower is better)
Translates to: MLVTVGEPLEGLGSNEYWWEAMF*IFRQVL
Trigger: TAACACCTGTCTGAAAATCAAAAACATGGCTTCCCA...CCAGTATTCATTAGAACCCAGTCCCTCGAGCGGCTCACCCACTGTTACTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCTCGCCTCCGCTTGTTaGAGACTCTCGTTAGAAAGG +
Preference number: 5 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLLASAC*RLSLER
Trigger: CCTTTCTAACGAGAGTCTCAAACAAGCGGAGGCGAG...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GCAGCCAGCAGGCTCACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGTGTCCAGCAAGTAGTTaGGAATCAATCAATCATTCA +
Preference number: 5 (lower is better)
Translates to: AASRLTKRSSRNIPQMVLCPASS*ESINHS
Trigger: TGAATGATTGATTGATTCCAAACTACTTGCTGGACA...CAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTGAGCCTGCTGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp AAAATCCCGAGAGACATCTTTGTGCAGACACGTTGTTCCTGCTTTGGACCATATATGGGGGAAGCCAAGTaGGTGCTCTCTTTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: KIPRDIFVQTRCSCFGPYMGEAK*VLSFLC
Trigger: ACAAAGGAAAGAGAGCACCAACTTGGCTTCCCCCAT...ATATGGTCCAAAGCAGGAACAACGTGTCTGCACAAAGATGTCTCTCGGGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAACGGGGATGCTTACATTaGACGATTCCTGTCATACGC +
Preference number: 5 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQRGCLH*TIPVIR
Trigger: GCGTATGACAGGAATCGTCAAATGTAAGCATCCCCG...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TTTTCTATGCTGCTGCCAAATTCTACTCAGTGTCCTAAGCACGCCTGGTGCTTCAAGCTTGTTTACACCTaGCAGTCTGTCACCTGCTTT +
Preference number: 5 (lower is better)
Translates to: FSMLLPNSTQCPKHAWCFKLVYT*QSVTCF
Trigger: AAAGCAGGTGACAGACTGCAAGGTGTAAACAAGCTT...GAAGCACCAGGCGTGCTTAGGACACTGAGTAGAATTTGGCAGCAGCATAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCTCATCATTGAAAGAGTaGGAGCCGAGAATAAAAGGT +
Preference number: 5 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACSSLKE*EPRIKG
Trigger: ACCTTTTATTCTCGGCTCCAACTCTTTCAATGATGA...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 90 bp GTGACTCAGCAGAAAGGTGAAGACTTTGTAAAACAAAGCCACCAATaGCACCTGTGGTTCCCATTGTCATCTTCCATCATATGCAGGCGA +
Preference number: 5 (lower is better)
Translates to: VTQQKGEDFVKQSHQ*HLWFPLSSSIICRR
Trigger: TCGCCTGCATATGATGGAAGATGACAATGGGAACCACAGGTGTCATTGGTGGCTTTGTTTTACAAAGTCTTCACCTTTCTGCTGAGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427404.5
ENST00000457431.1
ENST00000593990.1
ENST00000594657.1
ENST00000595366.5
ENST00000601762.5
CDS GCA 90 bp TTATCAGAGAATGCGGTCTCAGCCATAGTGACAAATCCCAGGCCTTaGTCGATTTTCAGACATGACCACCCAGTTTGGTCCAATAAACAT +
Preference number: 5 (lower is better)
Translates to: LSENAVSAIVTNPRP*SIFRHDHPVWSNKH
Trigger: ATGTTTATTGGACCAAACTGGGTGGTCATGTCTGAAAATCGAGCAAGGCCTGGGATTTGTCACTATGGCTGAGACCGCATTCTCTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CCA 90 bp AGATTGTCAATGCCAATCAAATCTTTCTTGAGTTCGTGCAGCTTCTaGAAATTCTCCATCTTGATCATCGTACCGTGGAGCTGTGCCACC +
Preference number: 5 (lower is better)
Translates to: RLSMPIKSFLSSCSF*KFSILIIVPWSCAT
Trigger: GGTGGCACAGCTCCACGGTACGATGATCAAGATGGAGAATTTCCAGAAGCTGCACGAACTCAAGAAAGATTTGATTGGCATTGACAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000423063.2
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS-3UTR CAA 90 bp GCTGGAATAGAAATGAATCTTCCCCTAGTGGCAAACAACCCACAGCAGAAAAGCTCCAGCATCTGGATTTaGATGGACACGAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: AGIEMNLPLVANNPQQKSSSIWI*MDTSFP
Trigger: AGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGA...GCTTTTCTGCTGTGGGTTGTTTGCCACTAGGGGAAGATTCATTTCTATTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR CAA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTCGCACCTTGGCCCAGTaGAAGGCATTGATCTTAGTG +
Preference number: 5 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVRTLAQ*KALILV
Trigger: CACTAAGATCAATGCCTTCAACTGGGCCAAGGTGCG...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTGCATCTGGCCGGAGCTaGATGAGAAAGCGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: YASLESYCVIMYGSMFTFASGRS*MRKRFL
Trigger: GAGGAAGCGCTTTCTCATCAAGCTCCGGCCAGATGC...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACTCCTGGTACGCACTATaGGCATCTGGCCGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNSWYAL*ASGRSL
Trigger: CAAGCTCCGGCCAGATGCCAATAGTGCGTACCAGGA...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGGACATCGCCGATTCTTaGGTAATCTCTGATTTGGGC +
Preference number: 5 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRDIADS*VISDLG
Trigger: GCCCAAATCAGAGATTACCAAAGAATCGGCGATGTC...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACGGCCCTCGCCTCCGCTaGTTTGAGACTCTCGTTAGA +
Preference number: 5 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNGPRLR*FETLVR
Trigger: TCTAACGAGAGTCTCAAACAAGCGGAGGCGAGGGCC...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTTTTGCAAGTTGCTGTTaGTTTCCAGCTACACCAGTC +
Preference number: 5 (lower is better)
Translates to: TGNRLVHLVRQMINTRQAFASCC*FPATPV
Trigger: GACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAA...AGCCTGCCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTAGGCTCTTCGTCCGTTaGCAAGTTGCTGTTTGTTTC +
Preference number: 5 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIRLFVR*QVAVCF
Trigger: GAAACAAACAGCAACTTGCAAACGGACGAAGAGCCT...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGGTATTTTTATTCCCTTaGTTAGTACTGGAAACCGTC +
Preference number: 5 (lower is better)
Translates to: RPFASCCLFPATPVRAPQVFLFP*LVLETV
Trigger: GACGGTTTCCAGTACTAACAAAGGGAATAAAAATAC...CTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTACGTACCATGATTCATCAATATGCTGGATaGTGGCGTGAGGTATTTTTA +
Preference number: 5 (lower is better)
Translates to: VAGGYRNNDRCRGLRTMIHQYAG*WREVFL
Trigger: TAAAAATACCTCACGCCACAATCCAGCATATTGATG...AATCATGGTACGTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTTGTGAAGTGGCTGGTTaGGTTCTGTATGTAGCATTT +
Preference number: 5 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLCEVAG*VLYVAF
Trigger: AAATGCTACATACAGAACCAAACCAGCCACTTCACA...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCATGCACTGGCCACTTCTaGCTGGGTTCTGATTTTCTT +
Preference number: 5 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPCTGHF*LGSDFL
Trigger: AAGAAAATCAGAACCCAGCAAGAAGTGGCCAGTGCA...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp AAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTAGGACCGTCTTTGGAGTaGGTGTGTGTTTTACACTTA +
Preference number: 5 (lower is better)
Translates to: KMGFLPSHRECICIPGILGPSLE*VCVLHL
Trigger: TAAGTGTAAAACACACACCAACTCCAAAGACGGTCC...TAAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp AACCCTACCTCTGGCCTTCCTCCACTCTTAGTTCAACTTCATGCACACGCATGCTCAGCATTGCTTGGCTaGAATCTTCAAATAAGTTCT +
Preference number: 5 (lower is better)
Translates to: NPTSGLPPLLVQLHAHACSALLG*NLQISS
Trigger: AGAACTTATTTGAAGATTCAAGCCAAGCAATGCTGA...GCATGCGTGTGCATGAAGTTGAACTAAGAGTGGAGGAAGGCCAGAGGTAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTCCCTCCTTAGCGTCCTaGGTCTGTGTGCTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALPSLAS*VCVLFH
Trigger: ATGGAAAAGCACACAGACCAAGGACGCTAAGGAGGG...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GTACACCAACCAAGAGCAACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACATATAAAGTGCAAGCCTaGTTGGAAGAGCAAAGTTCA +
Preference number: 5 (lower is better)
Translates to: VHQPRATMLENSPSLRCTYKVQA*LEEQSS
Trigger: TGAACTTTGCTCTTCCAACAAGGCTTGCACTTTATA...TGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGTTGCTCTTGGTTGGTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTCACCAAAGTGTGGTCCTCTTCTaGATACCTGAGGTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: SRCCSSLHPHSIGFQFHQSVVLF*IPEVVE
Trigger: CTCAACAACCTCAGGTATCAAGAAGAGGACCACACT...TTGGTGAAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp ACCATGCTGGAAAACAGTCCTTCTCTGCGCTGTACACAATTCAAAGGCAGGCATACAAACATGGTTCTGTaGTTAGGTAAAATGAGCCCG +
Preference number: 5 (lower is better)
Translates to: TMLENSPSLRCTQFKGRHTNMVL*LGKMSP
Trigger: CGGGCTCATTTTACCTAACAACAGAACCATGTTTGT...ATGCCTGCCTTTGAATTGTGTACAGCGCAGAGAAGGACTGTTTTCCAGCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 90 bp TGTCATCTTCCATCATATGCAGGCGAAGTTCTTCAACCTTGTCTCTaGAGCACAGCTTTTCCCCAAGAACCGATCACTTTCTACACACAA +
Preference number: 5 (lower is better)
Translates to: CHLPSYAGEVLQPCL*STAFPQEPITFYTQ
Trigger: TTGTGTGTAGAAAGTGATCGGTTCTTGGGGAAAAGCTGTGCTTCAGAGACAAGGTTGAAGAACTTCGCCTGCATATGATGGAAGATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599151.5
CDS GCA 90 bp AAATTTGTGCAAAGGTTCAAAATTCGGGAATATGAGACTTTTCAGTaGTTCCGGCATGGCGTCCTCTTTGCTCACTGTGCTCTGAAACCA +
Preference number: 5 (lower is better)
Translates to: KFVQRFKIREYETFQ*FRHGVLFAHCALKP
Trigger: TGGTTTCAGAGCACAGTGAGCAAAGAGGACGCCATGCCGGAAGCACTGAAAAGTCTCATATTCCCGAATTTTGAACCTTTGCACAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000457029.3
ENST00000595437.5
ENST00000627049.2
CDS GCA 90 bp GAACTTCACTCTGAAGGTAATTCTGCTCCACGTCACATCCCAGAATaGAAAATGGTGCAGCCACTATGGAAAAACAGTACAGCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: ELHSEGNSAPRHIPE*KMVQPLWKNSTAVS
Trigger: AGAAACTGCTGTACTGTTTTTCCATAGTGGCTGCACCATTTTGCATTCTGGGATGTGACGTGGAGCAGAATTACCTTCAGAGTGAAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598346.5
CDS-3UTR CAA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTTCCAGCATCTGGATTTaGATGGACACGAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGISSIWI*MDTSFP
Trigger: AGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGA...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCATCCAGCATCTGGATTTaGATGGACACGAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPSSIWI*MDTSFP
Trigger: AGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGA...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAACTTCCCAGGAGCTCTTaGTGGAACTTCAAATGCCTC +
Preference number: 5 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKLPRSS*WNFKCL
Trigger: GAGGCATTTGAAGTTCCACAAAGAGCTCCTGGGAAG...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTGACATCGCCGATTCTTaGGTAATCTCTGATTTGGGC +
Preference number: 5 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLDIADS*VISDLG
Trigger: GCCCAAATCAGAGATTACCAAAGAATCGGCGATGTC...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTCACCCGTTGCTGTTTTaGAATTTCCTCAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: LLSSHCVHHSQDGDSPGIHPLLF*NFLSRF
Trigger: AAACCTGCTGAGGAAATTCAAAAACAGCAACGGGTG...AATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATGGGAAGATAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCAAACGATTTGGTCAACTaGCACCAAGAAGTAGGTTGG +
Preference number: 5 (lower is better)
Translates to: TQTDSKTPRLIIFPLCTPNDLVN*HQEVGW
Trigger: CCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTT...TGGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCACTGGATCTCGGCTTaGCTTAACAGAAAACAACCC +
Preference number: 5 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLHWISA*LNRKQP
Trigger: GGGTTGTTTTCTGTTAAGCAAAGCCGAGATCCAGTG...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp CACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATAGTTTCAAACCACAGTaGCAGGAGGATATAGGAATA +
Preference number: 5 (lower is better)
Translates to: HTGFHACDTDRQQNTTAYSFKPQ*QEDIGI
Trigger: TATTCCTATATCCTCCTGCAACTGTGGTTTGAAACT...ATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp TGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATTTTCGTCCGTTTGCAAGTaGCTGTTTGTTTCCAGCTAC +
Preference number: 5 (lower is better)
Translates to: CVVCLKLHSDGLLPTLVFSSVCK*LFVSSY
Trigger: GTAGCTGGAAACAAACAGCAACTTGCAAACGGACGA...AAATACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTTGAGACACACTACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATTTGCATCTTTGGGTGCATaGCCTTCTGTTGTCATACCA +
Preference number: 5 (lower is better)
Translates to: CVVCLKLHSDGLLPTLVFASLGA*PSVVIP
Trigger: TGGTATGACAACAGAAGGCAATGCACCCAAAGATGC...AAATACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTTGAGACACACTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp GTGGATGGGCCCCTCTGTATGCAGCTTCACGTATCTGAGATCACATCTGTATCTGTGTTAATGTCACCTTaGAATTTAACTCTGGCCATT +
Preference number: 5 (lower is better)
Translates to: VDGPLCMQLHVSEITSVSVLMSP*NLTLAI
Trigger: AATGGCCAGAGTTAAATTCAAAGGTGACATTAACAC...AGATACAGATGTGATCTCAGATACGTGAAGCTGCATACAGAGGGGCCCATCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR CAA 90 bp AATGAATCTTCCCCTAGTGGCAAACAACCCACAGCAGAAAAGCTGTATTGCTTCAGCAGAAAAGCTGTATaGCTTCCCTTTAAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: NESSPSGKQPTAEKLYCFSRKAV*LPFKRH
Trigger: GTGCCTCTTAAAGGGAAGCAATACAGCTTTTCTGCT...GAAGCAATACAGCTTTTCTGCTGTGGGTTGTTTGCCACTAGGGGAAGATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR CAA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAATAATTGTCATTTGTTaGGGACCGGGACCGGGATCG +
Preference number: 5 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKIIVIC*GPGPGS
Trigger: CGATCCCGGTCCCGGTCCCAAACAAATGACAATTAT...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CAAGACGCTACTCCAGCTTTGCTTATAGGGCCTAAGAAAGAAAGGGCAATGGGTTTCAGTTTTGCTAATTaGAGCTGCATCTGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: QDATPALLIGPKKERAMGFSFAN*SCICGE
Trigger: TTCTCCACAGATGCAGCTCAAATTAGCAAAACTGAA...ACCCATTGCCCTTTCTTTCTTAGGCCCTATAAGCAAAGCTGGAGTAGCGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATTTTTTGCAAGTTGCTGTTaGTTTCCAGCTACACCAGTC +
Preference number: 5 (lower is better)
Translates to: CVVCLKLHSDGLLPTLVFFASCC*FPATPV
Trigger: GACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAA...AAATACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTTGAGACACACTACACA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTTGCCCTACGCCCCTTTaGGTACACCTAGAGGTTGAT +
Preference number: 5 (lower is better)
Translates to: YASLESYCVIMYGSMFTFCPTPL*VHLEVD
Trigger: ATCAACCTCTAGGTGTACCAAAAGGGGCGTAGGGCA...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp CAAAATGGGTTTCCTGCCCTCACATCGGGAATGCATATGCATCCCTGGAATCTTCATGCTCTGGAGTTTTaGTGTAAGAATCATGATCTT +
Preference number: 5 (lower is better)
Translates to: QNGFPALTSGMHMHPWNLHALEF*CKNHDL
Trigger: AAGATCATGATTCTTACACAAAAACTCCAGAGCATG...AAGATTCCAGGGATGCATATGCATTCCCGATGTGAGGGCAGGAAACCCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTGTGCATTGCCTTCTGTaGTCATACCAGGTCATAAAC +
Preference number: 5 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLVHCLL*SYQVIN
Trigger: GTTTATGACCTGGTATGACAACAGAAGGCAATGCAC...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp GAAAAGCTGTATTGCTTCCCTTTAAGAGGCACCAAATCTAGTAGATCAAACCAAAGATGTGAATGGTGCTaGGGCTTCATGGAGCATCTC +
Preference number: 5 (lower is better)
Translates to: EKLYCFPLRGTKSSRSNQRCEWC*GFMEHL
Trigger: GAGATGCTCCATGAAGCCCAAGCACCATTCACATCT...TTGGTTTGATCTACTAGATTTGGTGCCTCTTAAAGGGAAGCAATACAGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS-3UTR CAA 90 bp AAAACCCAGATACTGAAAGTCCCTTCCTGCCTCCTTAAAATCACTGAAACGCAATACTTCGTGTCAATGTaGGCTCTTACGTCGTTTCTC +
Preference number: 5 (lower is better)
Translates to: KTQILKVPSCLLKITETQYFVSM*ALTSFL
Trigger: GAGAAACGACGTAAGAGCCAACATTGACACGAAGTA...TTGCGTTTCAGTGATTTTAAGGAGGCAGGAAGGGACTTTCAGTATCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS-3UTR CAA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTTGTCCCAACTCATATTaGGACTTGAACTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVCPNSY*DLNCCC
Trigger: GCAGCAGCAGTTCAAGTCCAAATATGAGTTGGGACA...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCGCTATCAATTTACATTaGGCCTTGAATAGTGCCAAT +
Preference number: 5 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGAINLH*ALNSAN
Trigger: ATTGGCACTATTCAAGGCCAAATGTAAATTGATAGC...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CCTATTTCAAGGTGTTGCTCTTCCCTGCATCCACACTCAATAGGATTTCAGTTTGAAGCAGAAATTAAGTaGCTTGCCTGGTACAAAGCC +
Preference number: 5 (lower is better)
Translates to: PISRCCSSLHPHSIGFQFEAEIK*LAWYKA
Trigger: GGCTTTGTACCAGGCAAGCAACTTAATTTCTGCTTC...AAACTGAAATCCTATTGAGTGTGGATGCAGGGAAGAGCAACACCTTGAAATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp CTTTTACTGTATTCCACTAGATTCGAGACAGCCTGGGTAAGAAGTGACCCTGGCCTGGATTTTGTATATTaGGTGGAAATTTTGAGAGGC +
Preference number: 5 (lower is better)
Translates to: LLLYSTRFETAWVRSDPGLDFVY*VEILRG
Trigger: GCCTCTCAAAATTTCCACCAAATATACAAAATCCAG...GCCAGGGTCACTTCTTACCCAGGCTGTCTCGAATCTAGTGGAATACAGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTAAGCTACACCATGCTTaGAGGGTAAAGACAGAACGC +
Preference number: 5 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVKLHHA*RVKTER
Trigger: GCGTTCTGTCTTTACCCTCAAAGCATGGTGTAGCTT...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTATGAAAAACAGCTCCTaGGCCATCAGAAGCCAACTG +
Preference number: 5 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVMKNSS*AIRSQL
Trigger: CAGTTGGCTTCTGATGGCCAAGGAGCTGTTTTTCAT...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAACACTGTGACATGAGCTaGGCCTTCCATGCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKHCDMS*AFHAQR
Trigger: TCTTTGAGCATGGAAGGCCAAGCTCATGTCACAGTG...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAAGAATGCTGCTTTGTTaGAACACGGTGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKRMLLC*NTVVVM
Trigger: CATCACCACCACCGTGTTCAAACAAAGCAGCATTCT...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 90 bp AAAGGTAAAGAAGCGAATCACCCCGTAAGGAGAAAAAGCAGAATATaGGGTCAGAGGATTGCTTTATCTCCTCCGAACACAATGATTCTG +
Preference number: 5 (lower is better)
Translates to: KGKEANHPVRRKSRI*GQRIALSPPNTMIL
Trigger: CAGAATCATTGTGTTCGGAGGAGATAAAGCAATCCTCTGACCTCATATTCTGCTTTTTCTCCTTACGGGGTGATTCGCTTCTTTACCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423063.2
CDS TCA 90 bp AAGATTGGCACTTTTCTCCTTGGGCTCAGTGGTCTAATGAAGTCATaGAAGTGCATTCAGCCCACTGAACCTGAATCTTTAGAAAACACA +
Preference number: 5 (lower is better)
Translates to: KIGTFLLGLSGLMKS*KCIQPTEPESLENT
Trigger: TGTGTTTTCTAAAGATTCAGGTTCAGTGGGCTGAATGCACTTTCATGACTTCATTAGACCACTGAGCCCAAGGAGAAAAGTGCCAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000427404.5
ENST00000457431.1
ENST00000593990.1
ENST00000595366.5
ENST00000601762.5
CDS-3UTR CAA 90 bp TTGCAAACAAACAAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAGGAGAAGATTTCATTTaGTGTTTCCAGGGAGTATTC +
Preference number: 5 (lower is better)
Translates to: LQTNKQTPGSPLRKMQQPGEDFI*CFQGVF
Trigger: GAATACTCCCTGGAAACACAAAATGAAATCTTCTCC...TGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGTTTGTTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTCAAGCTCCTGAGAACTaGTCATTAGGACTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALQAPEN*SLGLAV
Trigger: AACAGCAAGTCCTAATGACAAGTTCTCAGGAGCTTG...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp AGTAACCTGATCTGGAGACTACATGAAGATGCAAATGCACTGCCTCCACTCCAAGTTACAGTTTCAGCTTaGTCATGCAATAGCTGTATT +
Preference number: 5 (lower is better)
Translates to: SNLIWRLHEDANALPPLQVTVSA*SCNSCI
Trigger: AATACAGCTATTGCATGACAAAGCTGAAACTGTAAC...TTGGAGTGGAGGCAGTGCATTTGCATCTTCATGTAGTCTCCAGATCAGGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CCA 90 bp AGTTTCCTCTTACATAAAATGGACGTAAAGATTGAACCACTTCACTaGGTCACCGTAAGGATTAAGCGACTTAGTATACACCATGCCCTT +
Preference number: 5 (lower is better)
Translates to: SFLLHKMDVKIEPLH*VTVRIKRLSIHHAL
Trigger: AAGGGCATGGTGTATACTAAGTCGCTTAATCCTTACGGTGACCCAGTGAAGTGGTTCAATCTTTACGTCCATTTTATGTAAGAGGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596545.5
CDS-3UTR CAA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTTGGGAAGCCATGTTTTaGATTTTCAGACAGGTGTTA +
Preference number: 5 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLWEAMF*IFRQVL
Trigger: TAACACCTGTCTGAAAATCAAAAACATGGCTTCCCA...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGGTATTTTTATTCCCTTaGTTAGTACTGGAAACCGTC +
Preference number: 5 (lower is better)
Translates to: KRFGQLAPRSRLGTGVFRVFLFP*LVLETV
Trigger: GACGGTTTCCAGTACTAACAAAGGGAATAAAAATAC...CCTGAAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAAATCGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS-3UTR CAA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACTCTGTTTTTCTTGGTTaGCTGTGGGACCTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNSVFLG*LWDLAW
Trigger: CCAAGCAAGGTCCCACAGCAAACCAAGAAAAACAGA...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACTCGACAGGCCATAACTaGAGTCTATTGCCTTGCCTT +
Preference number: 5 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNSTGHN*SLLPCL
Trigger: AAGGCAAGGCAATAGACTCAAGTTATGGCCTGTCGA...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAATCTTGCGTTTTTATTTaGCCCTTAACAAGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKSCVFI*PLTSGS
Trigger: GCTGCCGCTTGTTAAGGGCAAAATAAAAACGCAAGA...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAAGGGTTCAAAGAAACTaGCTCTGTTACAGGGATTAC +
Preference number: 5 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKRVQRN*LCYRDY
Trigger: GTAATCCCTGTAACAGAGCAAGTTTCTTTGAACCCT...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTAAAGGAGTCGTTAGCTaGGTTTCAAGAGCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVKGVVS*VSRARK
Trigger: TTTTCTGGCTCTTGAAACCAAGCTAACGACTCCTTT...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 90 bp CTGAGCACTTGGGTAGTTTGGTCAAGAAAAGCAAGAAATACTTGTTaGCTGAACTTCAGTCTTCAGAACTCTAAATACCTCTTTCACTGC +
Preference number: 5 (lower is better)
Translates to: LSTWVVWSRKARNTC*LNFSLQNSKYLFHC
Trigger: GCAGTGAAAGAGGTATTTAGAGTTCTGAAGACTGAAGTTCAGTCAACAAGTATTTCTTGCTTTTCTTGACCAAACTACCCAAGTGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS GCA 90 bp TTAATGAGGAAAGAAAAAGAGTCATGTGCTGAGGTTGCTAAGATCTaGAGTAAGAATAATCTTCCGTCTGGGAAACTTAAAGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: LMRKEKESCAEVAKI*SKNNLPSGKLKAGS
Trigger: AGACCCAGCTTTAAGTTTCCCAGACGGAAGATTATTCTTACTGCAGATCTTAGCAACCTCAGCACATGACTCTTTTTCTTTCCTCATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601361.1
CDS-3UTR CAA 90 bp GGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCATAACTTGAGTCTATaGCCTTGCCTTTATTACATG +
Preference number: 5 (lower is better)
Translates to: GFHACDTDRQQNTTAYYLHNLSL*PCLYYM
Trigger: CATGTAATAAAGGCAAGGCAATAGACTCAAGTTATG...AAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp TATGCATCCCTGGAATCTTACTGTGTCATCATGTATGGATCAATGTTCACTTTTGACTTCCTGCCAGTTTaGCTCCAAACATGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: YASLESYCVIMYGSMFTFDFLPV*LQTCCF
Trigger: GAAACAACATGTTTGGAGCAAAACTGGCAGGAAGTC...AAAAGTGAACATTGATCCATACATGATGACACAGTAAGATTCCAGGGATGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS-3UTR CAA 90 bp GGAACAGAAAAAGCATTCACCTCATCATTGAAAGAGTTGGAGCCGAGAATAAAAGATCCAACAATCAGCTaGATTCAATCAGGCACTGAA +
Preference number: 5 (lower is better)
Translates to: GTEKAFTSSLKELEPRIKDPTIS*IQSGTE
Trigger: TTCAGTGCCTGATTGAATCAAGCTGATTGTTGGATC...TTTTATTCTCGGCTCCAACTCTTTCAATGATGAGGTGAATGCTTTTTCTGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TTTATGCCGCTCACAGAAGTTCATTCAATCGTACCTTTCTCTCCATATGCTCTTTATTTGGTGGAAATTTaGAGAGGCTCGTGCTATGTT +
Preference number: 5 (lower is better)
Translates to: FMPLTEVHSIVPFSPYALYLVEI*RGSCYV
Trigger: AACATAGCACGAGCCTCTCAAAATTTCCACCAAATA...AAGAGCATATGGAGAGAAAGGTACGATTGAATGAACTTCTGTGAGCGGCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp GCTTTTGTGAATACTGGCCAAGAAGCAGAAATTAAGTTGCTTGCCTGGTACAAAATATCCCGTGGCAAGTaGATTTTTAATCTTCCCTAC +
Preference number: 5 (lower is better)
Translates to: AFVNTGQEAEIKLLAWYKISRGK*IFNLPY
Trigger: GTAGGGAAGATTAAAAATCAACTTGCCACGGGATAT...TTTGTACCAGGCAAGCAACTTAATTTCTGCTTCTTGGCCAGTATTCACAAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp TGGGGCTCAGTGGAATACGCAAAGCTGGCGGTATTTTATAGAAATTACAAAGTTATGAAAAATACCATCTaGTACTCAGGACAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: WGSVEYAKLAVFYRNYKVMKNTI*YSGQSF
Trigger: GAAGCTTTGTCCTGAGTACAAGATGGTATTTTTCAT...AACTTTGTAATTTCTATAAAATACCGCCAGCTTTGCGTATTCCACTGAGCCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS-3UTR CAA 90 bp ATGTTTTTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCTTGAGTCTATTGCCTaGCCTTTATTACATGTACAT +
Preference number: 5 (lower is better)
Translates to: MFLKTGTIYTTRECAVSNLESIA*PLLHVH
Trigger: ATGTACATGTAATAAAGGCAAGGCAATAGACTCAAG...GTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAAAAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS CAA 72 bp TCCTCCGTGGGCGCCGAGGCGGCTCCGTCCGCCTGCTaGTTACCCGCGGGGCTTCTCCTCGGCGCAGGGCTC +
Preference number: 6 (lower is better)
Translates to: SSVGAEAAPSAC*LPAGLLLGAGL
Trigger: GAGCCCTGCGCCGAGGAGAAGCCCCGCGGGTAACAAGCAGGCGGACGGAGCCGCCTCGGCGCCCACGGAGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596580.2
ENST00000600190.1
ENST00000627049.2
CDS GCA 72 bp TCTTCCTCCGTGGGCGCCGAGGCGGCTCCGTCCGCCTaGTTGTTACCCGCGGGGCTTCTCCTCGGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: SSSVGAEAAPSA*LLPAGLLLGAG
Trigger: CCCTGCGCCGAGGAGAAGCCCCGCGGGTAACAAGCAGGCGGACGGAGCCGCCTCGGCGCCCACGGAGGAAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596580.2
ENST00000600190.1
ENST00000627049.2
CDS CCA 72 bp CTGGGCCTGGCTGCTGCCCCGCATCAGACAGGGACTTaGGAGCCCAGGCAGCTCCCTCCTCGGGCGTGGGCC +
Preference number: 6 (lower is better)
Translates to: LGLAAAPHQTGT*EPRQLPPRAWA
Trigger: GGCCCACGCCCGAGGAGGGAGCTGCCTGGGCTCCCAAGTCCCTGTCTGATGCGGGGCAGCAGCCAGGCCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 72 bp TGTTGCCGCGGTGCGGGGCCTGGCGCTCCAGCGATGTaGGCGAGGCGCTCAGGTCATCCTCTGACTCCTGGT +
Preference number: 6 (lower is better)
Translates to: CCRGAGPGAPAM*ARRSGHPLTPG
Trigger: ACCAGGAGTCAGAGGATGACCTGAGCGCCTCGCGCACATCGCTGGAGCGCCAGGCCCCGCACCGCGGCAACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS GCA 72 bp GGCCGGCCCAGCCCCTGGAGCATTGTTAGGATGCGCTaGAGCCCAGCTAGGGGGCAGGGACAGGCACCTGTG +
Preference number: 6 (lower is better)
Translates to: GRPSPWSIVRMR*SPARGQGQAPV
Trigger: CACAGGTGCCTGTCCCTGCCCCCTAGCTGGGCTGCAGCGCATCCTAACAATGCTCCAGGGGCTGGGCCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 72 bp CTCAGGGCCGGCCCAGCCCCTGGAGCATTGTTAGGATaGGCTGCAGCCCAGCTAGGGGGCAGGGACAGGCAC +
Preference number: 6 (lower is better)
Translates to: LRAGPAPGALLG*AAAQLGGRDRH
Trigger: GTGCCTGTCCCTGCCCCCTAGCTGGGCTGCAGCGCATCCTAACAATGCTCCAGGGGCTGGGCCGGCCCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 72 bp CACACGTGCACCATTGTGTTGCCGCGGTGCGGGGCCTaGCGCTCCAGCGATGTGCGCGAGGCGCTCAGGTCA +
Preference number: 6 (lower is better)
Translates to: HTCTIVLPRCGA*RSSDVREALRS
Trigger: TGACCTGAGCGCCTCGCGCACATCGCTGGAGCGCCAGGCCCCGCACCGCGGCAACACAATGGTGCACGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS CAA 72 bp GGACTCAGTCCCACTGCTGGTGGAGCCCTCGGTCACTaGCAGGGGTGCCAGCTGCCCCGCCATGCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: GLSPTAGGALGH*QGCQLPRHASG
Trigger: GCCAGAGGCATGGCGGGGCAGCTGGCACCCCTGCAAGTGACCGAGGGCTCCACCAGCAGTGGGACTGAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 72 bp CCGTCCGGGGGCAGGCCTGGTCATTCAGCAGCGGGCTaGTCAAGGGAGAGGCCTGCTTGGTGTCGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: PSGGRPGHSAAG*SRERPAWCRGS
Trigger: TGAGCCCCGACACCAAGCAGGCCTCTCCCTTGATCAGCCCGCTGCTGAATGACCAGGCCTGCCCCCGGACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000457029.3
ENST00000595437.5
ENST00000627049.2
CDS GCA 72 bp GGCGTGGGCCTGGAAGGGACCATGGCAGCCAGTGTTTaGCTGTACGTGATGGCCCGGGTGGCAAGTCCCGCC +
Preference number: 6 (lower is better)
Translates to: GVGLEGTMAASV*LYVMARVASPA
Trigger: GGCGGGACTTGCCACCCGGGCCATCACGTACAGGCAAACACTGGCTGCCATGGTCCCTTCCAGGCCCACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 72 bp GCCAGGCTTCTACCCTCGGGAGCAGCTGCGCTGGCTTaGCCCCACTTCCCACGGCCACCAAGCCCATCCATG +
Preference number: 6 (lower is better)
Translates to: ARLLPSGAAALA*PHFPRPPSPSM
Trigger: CATGGATGGGCTTGGTGGCCGTGGGAAGTGGGGGCAAGCCAGCGCAGCTGCTCCCGAGGGTAGAAGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 72 bp CCTCGGTCACTTGCAGGGGTGCCAGCTGCCCCGCCATaGCTCTGGCACACACCGACTGCACAGCAGGGACCT +
Preference number: 6 (lower is better)
Translates to: PRSLAGVPAAPP*LWHTPTAQQGP
Trigger: AGGTCCCTGCTGTGCAGTCGGTGTGTGCCAGAGGCATGGCGGGGCAGCTGGCACCCCTGCAAGTGACCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 72 bp CTGGTGGAGCCCTCGGTCACTTGCAGGGGTGCCAGCTaGCCCGCCATGCCTCTGGCACACACCGACTGCACA +
Preference number: 6 (lower is better)
Translates to: LVEPSVTCRGAS*PAMPLAHTDCT
Trigger: TGTGCAGTCGGTGTGTGCCAGAGGCATGGCGGGGCAGCTGGCACCCCTGCAAGTGACCGAGGGCTCCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CCA 72 bp CGGCCCTCATCCTCATCGTCCGTCCGGGGGCAGGCCTaGTCATTCAGCAGCGGGCTGATCAAGGGAGAGGCC +
Preference number: 6 (lower is better)
Translates to: RPSSSSSVRGQA*SFSSGLIKGEA
Trigger: GGCCTCTCCCTTGATCAGCCCGCTGCTGAATGACCAGGCCTGCCCCCGGACGGACGATGAGGATGAGGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000457029.3
ENST00000595437.5
ENST00000627049.2
CDS CCA 72 bp TCTGCCAAAGCGGCTCGGCAGTCCCTGAAGTCGGCGTaGCTCGGCGGGTGGTGTTTGCACAGCCGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SAKAARQSLKSA*LGGWCLHSRSR
Trigger: CCTGGAGCGGCTGTGCAAACACCACCCGCCGAGCCACGCCGACTTCAGGGACTGCCGAGCCGCTTTGGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000423063.2
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS CCA 72 bp TCCCAGCACTCACCTCGGCAGTCCCTGAAGTCGGCGTaGCTCGGCGGGTGGTGTTTGCACAGCCGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SQHSPRQSLKSA*LGGWCLHSRSR
Trigger: CCTGGAGCGGCTGTGCAAACACCACCCGCCGAGCCACGCCGACTTCAGGGACTGCCGAGGTGAGTGCTGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS GCA 72 bp TGCCCTCCTAGTGGGTGTGTGGATTCGGGCCACCTGTaGGGGAGCCACCTACGCAGGGCCAACTCCGCATGC +
Preference number: 6 (lower is better)
Translates to: CPPSGCVDSGHL*GSHLRRANSAC
Trigger: GCATGCGGAGTTGGCCCTGCGTAGGTGGCTCCCGCACAGGTGGCCCGAATCCACACACCCACTAGGAGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CAA 72 bp TGCTGCCTCTGGCAGCCCGGGATGCTGGACCTGTGCTaGGCTGCGGGGGCTGAGGTTTACTCTGCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: CCLWQPGMLDLC*AAGAEVYSAGS
Trigger: GGACCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAGCACAGGTCCAGCATCCCGGGCTGCCAGAGGCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CAA 72 bp AGCCAGGCTTCTACCCTCGGGAGCAGCTGCGCTGGCTaGCCCCCACTTCCCACGGCCACCAAGCCCATCCAT +
Preference number: 6 (lower is better)
Translates to: SQASTLGSSCAG*PPLPTATKPIH
Trigger: ATGGATGGGCTTGGTGGCCGTGGGAAGTGGGGGCAAGCCAGCGCAGCTGCTCCCGAGGGTAGAAGCCTGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 72 bp TACTGCTGCCTCTGGCAGCCCGGGATGCTGGACCTGTaGTTGGCTGCGGGGGCTGAGGTTTACTCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: YCCLWQPGMLDL*LAAGAEVYSAG
Trigger: CCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAGCACAGGTCCAGCATCCCGGGCTGCCAGAGGCAGCAGTA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 72 bp TGTGCCATTAGCCAGGCTTCTACCCTCGGGAGCAGCTaGGCTGGCTTGCCCCCACTTCCCACGGCCACCAAG +
Preference number: 6 (lower is better)
Translates to: CAISQASTLGSS*AGLPPLPTATK
Trigger: CTTGGTGGCCGTGGGAAGTGGGGGCAAGCCAGCGCAGCTGCTCCCGAGGGTAGAAGCCTGGCTAATGGCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 72 bp CGCACTGTTCCTTCTCCCTCACACGCCCAGTACAGGTaGTCGCTGCGCAGCTGGGGTGTGAGAGCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: RTVPSPSHAQYR*SLRSWGVRAGQ
Trigger: CTGGCCAGCTCTCACACCCCAGCTGCGCAGCGAGCACCTGTACTGGGCGTGTGAGGGAGAAGGAACAGTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CCA 72 bp TCAAGGGAGAGGCCTGCTTGGTGTCGGGGCTCAGGTTaGGAGACAAGGTCACGTTGGCAGGGGCCACTCCCC +
Preference number: 6 (lower is better)
Translates to: SRERPAWCRGSG*ETRSRWQGPLP
Trigger: GGGGAGTGGCCCCTGCCAACGTGACCTTGTCTCCCAACCTGAGCCCCGACACCAAGCAGGCCTCTCCCTTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000457029.3
ENST00000595437.5
ENST00000627049.2
CDS CAA 90 bp CTCCAACTGCACCGTCCACTTCTCTCTCACGGCCCTAGTGCAGGGTaGCCACTGCCCAGGTACCTGCCTGCAGACCCTCCAGCACCCAGG +
Preference number: 6 (lower is better)
Translates to: LQLHRPLLSHGPSAG*PLPRYLPADPPAPR
Trigger: CCTGGGTGCTGGAGGGTCTGCAGGCAGGTACCTGGGCAGTGGCAACCCTGCACTAGGGCCGTGAGAGAGAAGTGGACGGTGCAGTTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS TCA 72 bp TGGAAGGGACCATGGCAGCCAGTGTTTGCCTGTACGTaGTGGCCCGGGTGGCAAGTCCCGCCAGGACTGAGC +
Preference number: 6 (lower is better)
Translates to: WKGPWQPVFACT*WPGWQVPPGLS
Trigger: GCTCAGTCCTGGCGGGACTTGCCACCCGGGCCATCACGTACAGGCAAACACTGGCTGCCATGGTCCCTTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 72 bp CCTGCGAGTTCACAGACAGCTCGGAAAGGTGAGGACTaGCAGTCAGGGAGCCTGTGCTTGGCTGCGGGGGCT +
Preference number: 6 (lower is better)
Translates to: PASSQTARKGED*QSGSLCLAAGA
Trigger: AGCCCCCGCAGCCAAGCACAGGCTCCCTGACTGGCAGTCCTCACCTTTCCGAGCTGTCTGTGAACTCGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS GCA 72 bp TTCACGCGGAACCCTCAGAGCAAGGACCACACGACCTaGACAAACGCAGCCCTGCCTCGCCTCCATGCTGCC +
Preference number: 6 (lower is better)
Translates to: FTRNPQSKDHTT*TNAALPRLHAA
Trigger: GGCAGCATGGAGGCGAGGCAGGGCTGCGTTTGTGCAGGTCGTGTGGTCCTTGCTCTGAGGGTTCCGCGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601853.5
CDS GCA 72 bp ACCGTCCACTTCTCTCTCACGGCCCTAGTGCAGGGTTaGCACTGCCCAGGTACCTGCCTGCAGACCCTCCAG +
Preference number: 6 (lower is better)
Translates to: TVHFSLTALVQG*HCPGTCLQTLQ
Trigger: CTGGAGGGTCTGCAGGCAGGTACCTGGGCAGTGGCAACCCTGCACTAGGGCCGTGAGAGAGAAGTGGACGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CAA 72 bp CACCGTCCACTTCTCTCTCACGGCCCTAGTGCAGGGTaGCCACTGCCCAGGTACCTGCCTGCAGACCCTCCA +
Preference number: 6 (lower is better)
Translates to: HRPLLSHGPSAG*PLPRYLPADPP
Trigger: TGGAGGGTCTGCAGGCAGGTACCTGGGCAGTGGCAACCCTGCACTAGGGCCGTGAGAGAGAAGTGGACGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CAA 90 bp CAGGCCTGGTCATTCAGCAGCGGGCTGATCAAGGGAGAGGCCTGCTaGGTGTCGGGGCTCAGGTTGGGAGACAAGGTCACGTTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: QAWSFSSGLIKGEAC*VSGLRLGDKVTLAG
Trigger: CCCTGCCAACGTGACCTTGTCTCCCAACCTGAGCCCCGACACCAAGCAGGCCTCTCCCTTGATCAGCCCGCTGCTGAATGACCAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000457029.3
ENST00000595437.5
ENST00000627049.2
CDS TCA 72 bp GCCCGGGATGCTGGACCTGTGCTTGGCTGCGGGGGCTaGGGTTTACTCTGCTGGGTCCTATCCTTAACGACC +
Preference number: 6 (lower is better)
Translates to: ARDAGPVLGCGG*GLLCWVLSLTT
Trigger: GGTCGTTAAGGATAGGACCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAGCACAGGTCCAGCATCCCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 72 bp GCCCAGCTAGGGGGCAGGGACAGGCACCTGTGTCCATaGTACCTCCAAACAACTCTGAGCAGGCCTGACGCA +
Preference number: 6 (lower is better)
Translates to: AQLGGRDRHLCP*YLQTTLSRPDA
Trigger: TGCGTCAGGCCTGCTCAGAGTTGTTTGGAGGTAGCATGGACACAGGTGCCTGTCCCTGCCCCCTAGCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 72 bp GTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATaGATTGCCAGCAGGCGGAAGCTGAAGGAGGGAAAG +
Preference number: 6 (lower is better)
Translates to: VTPRQKWGRRTP*IASRRKLKEGK
Trigger: CTTTCCCTCCTTCAGCTTCCGCCTGCTGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 72 bp AGGAATGGAAGTACTGCTGCCTCTGGCAGCCCGGGATaGTGGACCTGTGCTTGGCTGCGGGGGCTGAGGTTT +
Preference number: 6 (lower is better)
Translates to: RNGSTAASGSPG*WTCAWLRGLRF
Trigger: AAACCTCAGCCCCCGCAGCCAAGCACAGGTCCAGCATCCCGGGCTGCCAGAGGCAGCAGTACTTCCATTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 72 bp GGTCCTTTCCTCCGGGCTCGGCCAACACACAGGCAATaGCAGTGTGACAGGACAAGGCGGACAGGAGGTCAG +
Preference number: 6 (lower is better)
Translates to: GPFLRARPTHRQ*QCDRTRRTGGQ
Trigger: CTGACCTCCTGTCCGCCTTGTCCTGTCACACTGGCATTGCCTGTGTGTTGGCCGAGCCCGGAGGAAAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CCA 72 bp GATGTGCGCGAGGCGCTCAGGTCATCCTCTGACTCCTaGTCAGCCGCGGTGGCTTCATCAGGGGACTTGTTG +
Preference number: 6 (lower is better)
Translates to: DVREALRSSSDS*SAAVASSGDLL
Trigger: CAACAAGTCCCCTGATGAAGCCACCGCGGCTGACCAGGAGTCAGAGGATGACCTGAGCGCCTCGCGCACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS CCA 72 bp AAGCCCTACGCCCAGCCTCTCTTCGCCCCTCCTCCCTaGACAGCAGATAGACACCGCTGGTCAGATCACCCT +
Preference number: 6 (lower is better)
Translates to: KPYAQPLFAPPP*TADRHRWSDHP
Trigger: AGGGTGATCTGACCAGCGGTGTCTATCTGCTGTCCAGGGAGGAGGGGCGAAGAGAGGCTGGGCGTAGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CCA 72 bp GCAAGGAATAAGGGCCTTGCCCTCCTAGTGGGTGTGTaGATTCGGGCCACCTGTGCGGGAGCCACCTACGCA +
Preference number: 6 (lower is better)
Translates to: ARNKGLALLVGV*IRATCAGATYA
Trigger: TGCGTAGGTGGCTCCCGCACAGGTGGCCCGAATCCACACACCCACTAGGAGGGCAAGGCCCTTATTCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CAA 90 bp GGGGCGCAGTGGGATGTAGCCGCTGCTTTCTGTCGCAGCCTCACTTaGTGGCTCTCCCTGTGCCCTGCACGCTTTTGGCAATGTTCCGGT +
Preference number: 6 (lower is better)
Translates to: GAQWDVAAAFCRSLT*WLSLCPARFWQCSG
Trigger: ACCGGAACATTGCCAAAAGCGTGCAGGGCACAGGGAGAGCCACAAAGTGAGGCTGCGACAGAAAGCAGCGGCTACATCCCACTGCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS TCA 72 bp CTGCCAGTCAGGGAGCCTGTGCTTGGCTGCGGGGGCTaGGGTTTACTCTGCTGGGTCCTATCCTTAACGACC +
Preference number: 6 (lower is better)
Translates to: LPVREPVLGCGG*GLLCWVLSLTT
Trigger: GGTCGTTAAGGATAGGACCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAGCACAGGCTCCCTGACTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS TCA 72 bp CTTCGTGTCAATGTTGGCTCTTACGTCGTTTCTCTGTaGAGTCGCCCACGGCTCCGGGCTCCAGGCCACCCC +
Preference number: 6 (lower is better)
Translates to: LRVNVGSYVVSL*SRPRLRAPGHP
Trigger: GGGGTGGCCTGGAGCCCGGAGCCGTGGGCGACTTCACAGAGAAACGACGTAAGAGCCAACATTGACACGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS TCA 72 bp CCCGTGTGTGGGGAGACTTGGCAGGTCCTGGGACCCTaGTCTCATCACTTCCCCTTGTCACTTGCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: PVCGETWQVLGP*SHHFPLSLAVG
Trigger: CCCCACAGCAAGTGACAAGGGGAAGTGATGAGATCAGGGTCCCAGGACCTGCCAAGTCTCCCCACACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS TCA 72 bp AAGGGCGCAGGGAAGTTGGGACCCCACTTTCTGCCATaGGAACAGAATCGCCTGCTGGTGTCGGGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: KGAGKLGPHFLP*EQNRLLVSGSG
Trigger: CCCACTGCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTCCCTGCGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS TCA 72 bp TGCTGCGGGCATCTAGTGGGTGGCCAGGGATGCCGCTaGACATCCTGCACAATGCAGGACGGACTCCCCAAA +
Preference number: 6 (lower is better)
Translates to: CCGHLVGGQGCR*TSCTMQDGLPK
Trigger: TTTGGGGAGTCCGTCCTGCATTGTGCAGGATGTTCAGCGGCATCCCTGGCCACCCACTAGATGCCCGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 72 bp TGGTCATTCAGCAGCGGGCTGATCAAGGGAGAGGCCTaGTTGGTGTCGGGGCTCAGGTTGGGAGACAAGGTC +
Preference number: 6 (lower is better)
Translates to: WSFSSGLIKGEA*LVSGLRLGDKV
Trigger: GACCTTGTCTCCCAACCTGAGCCCCGACACCAAGCAGGCCTCTCCCTTGATCAGCCCGCTGCTGAATGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000457029.3
ENST00000595437.5
ENST00000627049.2
CDS GCA 72 bp CTCCAAGCAAGATGTCTAGGGCCTCAGCCAACACCGTaGAGGGTAAGGGCGCAGGGAAGTTGGGACCCCACT +
Preference number: 6 (lower is better)
Translates to: LQARCLGPQPTP*RVRAQGSWDPT
Trigger: AGTGGGGTCCCAACTTCCCTGCGCCCTTACCCTGCACGGTGTTGGCTGAGGCCCTAGACATCTTGCTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 72 bp TGCCTCCCGGGGCGAGGAGGGCTCAGCAGGGCAAACTaGACAAGTAGTCGGCTTGGGGATGCAATTTGCAGA +
Preference number: 6 (lower is better)
Translates to: CLPGRGGLSRAN*TSSRLGDAICR
Trigger: TCTGCAAATTGCATCCCCAAGCCGACTACTTGTGCAGTTTGCCCTGCTGAGCCCTCCTCGCCCCGGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 72 bp GCATCTCAGAGTCTGACTCACTGGACTCAGTCCCACTaGTGGTGGAGCCCTCGGTCACTTGCAGGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: ASQSLTHWTQSH*WWSPRSLAGVP
Trigger: TGGCACCCCTGCAAGTGACCGAGGGCTCCACCAGCAGTGGGACTGAGTCCAGTGAGTCAGACTCTGAGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 72 bp ACTTCCTGTTCGGCCTCTGCTCTTAGGTTACGGCTTTaGGGGGTCCATGGGGCGCAGTGGGATGTAGCCGCT +
Preference number: 6 (lower is better)
Translates to: TSCSASALRLRL*GVHGAQWDVAA
Trigger: AGCGGCTACATCCCACTGCGCCCCATGGACCCCGCAAAGCCGTAACCTAAGAGCAGAGGCCGAACAGGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CCA 72 bp CAGGGGCGGGGCTGCTGCTCTTCTCCGCCAGGTCAATaGCCATCTGGATGTCCTCAACCCACTTCTCCATCT +
Preference number: 6 (lower is better)
Translates to: QGRGCCSSPPGQ*PSGCPQPTSPS
Trigger: AGATGGAGAAGTGGGTTGAGGACATCCAGATGGCCATTGACCTGGCGGAGAAGAGCAGCAGCCCCGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS CCA 72 bp TGGAAGAGGGGGTCCTCTTCTGCAGGGCCCTGTGCGTaGGAAGGGGGTGTCTACCTTTCGAACGTGTACTCG +
Preference number: 6 (lower is better)
Translates to: WKRGSSSAGPCA*EGGVYLSNVYS
Trigger: CGAGTACACGTTCGAAAGGTAGACACCCCCTTCCCACGCACAGGGCCCTGCAGAAGAGGACCCCCTCTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 72 bp TCTCAGAGTCTGACTCACTGGACTCAGTCCCACTGCTaGTGGAGCCCTCGGTCACTTGCAGGGGTGCCAGCT +
Preference number: 6 (lower is better)
Translates to: SQSLTHWTQSHC*WSPRSLAGVPA
Trigger: AGCTGGCACCCCTGCAAGTGACCGAGGGCTCCACCAGCAGTGGGACTGAGTCCAGTGAGTCAGACTCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CCA 72 bp CAGCGCCTTCAAAACCACACACCGCTCTCACCCCCATaGGCGACAGATCTGAGGAGTCCTCAGAGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: QRLQNHTPLSPP*ATDLRSPQSQE
Trigger: CTCCTGGCTCTGAGGACTCCTCAGATCTGTCGCCCATGGGGGTGAGAGCGGTGTGTGGTTTTGAAGGCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CAA 72 bp TCATTCAGCAGCGGGCTGATCAAGGGAGAGGCCTGCTaGGTGTCGGGGCTCAGGTTGGGAGACAAGGTCACG +
Preference number: 6 (lower is better)
Translates to: SFSSGLIKGEAC*VSGLRLGDKVT
Trigger: CGTGACCTTGTCTCCCAACCTGAGCCCCGACACCAAGCAGGCCTCTCCCTTGATCAGCCCGCTGCTGAATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000457029.3
ENST00000595437.5
ENST00000627049.2
CDS GCA 72 bp AGGGTAAGGGCGCAGGGAAGTTGGGACCCCACTTTCTaGCATGAGAACAGAATCGCCTGCTGGTGTCGGGCA +
Preference number: 6 (lower is better)
Translates to: RVRAQGSWDPTF*HENRIACWCRA
Trigger: TGCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTCCCTGCGCCCTTACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 72 bp TCGGTTCTGACCACAAATGCTGCGATTCTTCCTGCTTaGTGTGGCTCTAGGGGCGGCCACACTGCCCCTGAG +
Preference number: 6 (lower is better)
Translates to: SVLTTNAAILPA*CGSRGGHTAPE
Trigger: CTCAGGGGCAGTGTGGCCGCCCCTAGAGCCACAGCAAGCAGGAAGAATCGCAGCATTTGTGGTCAGAACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594657.1
ENST00000596545.5
CDS GCA 72 bp CTGTCGCAGCCTCACTTTGTGGCTCTCCCTGTGCCCTaGACGCTTTTGGCAATGTTCCGGTCTCTGTCCCCT +
Preference number: 6 (lower is better)
Translates to: LSQPHFVALPVP*TLLAMFRSLSP
Trigger: AGGGGACAGAGACCGGAACATTGCCAAAAGCGTGCAGGGCACAGGGAGAGCCACAAAGTGAGGCTGCGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CCA 72 bp CTTCGGTTCCTTTCCTCGCCGGCAGCTCTGGCCCCCTaGAGATTCGGCACCTTCTCCAAATGTAAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: LRFLSSPAALAP*RFGTFSKCKAG
Trigger: ACCAGCCTTACATTTGGAGAAGGTGCCGAATCTCCAGGGGGCCAGAGCTGCCGGCGAGGAAAGGAACCGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596580.2
ENST00000600190.1
ENST00000627049.2
CDS CCA 72 bp GGGCTGCTGCTCTTCTCCGCCAGGTCAATGGCCATCTaGATGTCCTCAACCCACTTCTCCATCTCGGACCGA +
Preference number: 6 (lower is better)
Translates to: GLLLFSARSMAI*MSSTHFSISDR
Trigger: TCGGTCCGAGATGGAGAAGTGGGTTGAGGACATCCAGATGGCCATTGACCTGGCGGAGAAGAGCAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS CCA 72 bp TGTGACTCAACACGTGGGGTCGCGAGGCAGAGCTGGTaGCACTGCGGATCACTTCCATCCACCTTTCGAACG +
Preference number: 6 (lower is better)
Translates to: CDSTRGVARQSW*HCGSLPSTFRT
Trigger: CGTTCGAAAGGTGGATGGAAGTGATCCGCAGTGCCACCAGCTCTGCCTCGCGACCCCACGTGTTGAGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS CCA 72 bp AGCCAACCCCCGTCCCTTGTCCAGGCAGAAGACAGGTaGCCCTTCCTAGGGCAGAAGTTGTCCTTCAGTGGA +
Preference number: 6 (lower is better)
Translates to: SQPPSLVQAEDR*PFLGQKLSFSG
Trigger: TCCACTGAAGGACAACTTCTGCCCTAGGAAGGGCCACCTGTCTTCTGCCTGGACAAGGGACGGGGGTTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 72 bp TACCAGGAAGATTCCGCATGTATGGCCTTGGCGAGGTaGGGGACCAGCGTTCATAAGGAGGACCCTGGTCCG +
Preference number: 6 (lower is better)
Translates to: YQEDSACMALAR*GTSVHKEDPGP
Trigger: CGGACCAGGGTCCTCCTTATGAACGCTGGTCCCCCACCTCGCCAAGGCCATACATGCGGAATCTTCCTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 72 bp AGAGCTGCGCTGGTGTCATTACACGTCAACCTGCCTTaGGCCAAGTCCTGCTTCACCTGCAGCGCGAACAGG +
Preference number: 6 (lower is better)
Translates to: RAALVSLHVNLP*AKSCFTCSANR
Trigger: CCTGTTCGCGCTGCAGGTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTGTAATGACACCAGCGCAGCTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000595817.5
ENST00000596467.5
ENST00000596580.2
ENST00000596613.5
ENST00000598389.5
ENST00000599040.5
ENST00000600032.5
ENST00000601009.1
ENST00000601853.5
ENST00000602263.5
ENST00000627049.2
CDS TCA 72 bp GTGGGGCCATCTCACTCGCTGACTTGGGAGAAATCCTaGTGTTTGGAAGAGGGGGTCCTCTTCTGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: VGPSHSLTWEKS*CLEEGVLFCRA
Trigger: GGCCCTGCAGAAGAGGACCCCCTCTTCCAAACATCAGGATTTCTCCCAAGTCAGCGAGTGAGATGGCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS TCA 72 bp CTGCTGCTGGGAGACAATGGGGTGGCCAGGGGGCTGTaGCCAGCCGAGCCCTTGAACATTTCATCTATGAGA +
Preference number: 6 (lower is better)
Translates to: LLLGDNGVARGL*PAEPLNISSMR
Trigger: TCTCATAGATGAAATGTTCAAGGGCTCGGCTGGTCACAGCCCCCTGGCCACCCCATTGTCTCCCAGCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 72 bp GTGGGAAAAGCAGGTCTGGAATGCGGCTCTGACCTCTaGGTGACCCAGCAAGTCCCTTCCCCTGAGTCTCAG +
Preference number: 6 (lower is better)
Translates to: VGKAGLECGSDL*VTQQVPSPESQ
Trigger: CTGAGACTCAGGGGAAGGGACTTGCTGGGTCACTCAGAGGTCAGAGCCGCATTCCAGACCTGCTTTTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CCA 72 bp CTTTGTGACTCAACACGTGGGGTCGCGAGGCAGAGCTaGTGGCACTGCGGATCACTTCCATCCACCTTTCGA +
Preference number: 6 (lower is better)
Translates to: LCDSTRGVARQS*WHCGSLPSTFR
Trigger: TCGAAAGGTGGATGGAAGTGATCCGCAGTGCCACCAGCTCTGCCTCGCGACCCCACGTGTTGAGTCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS CCA 72 bp GCCATGAGAACAGAATCGCCTGCTGGTGTCGGGCAGTaGGACCCCAGGTCTAAACGCTTAGTTGGCAGGGAA +
Preference number: 6 (lower is better)
Translates to: AMRTESPAGVGQ*DPRSKRLVGRE
Trigger: TTCCCTGCCAACTAAGCGTTTAGACCTGGGGTCCCACTGCCCGACACCAGCAGGCGATTCTGTTCTCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 72 bp ACCTGCACACCTGCACCTCAGCTGTGCTGTATCTACTaGGACTTTCCAGGCTGGAGGACAACGGAGTGCCCA +
Preference number: 6 (lower is better)
Translates to: TCTPAPQLCCIY*DFPGWRTTECP
Trigger: TGGGCACTCCGTTGTCCTCCAGCCTGGAAAGTCCCAGTAGATACAGCACAGCTGAGGTGCAGGTGTGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596545.5
CDS CAA 72 bp GAGAGCTGCGCTGGTGTCATTACACGTCAACCTGCCTaGAGCCAAGTCCTGCTTCACCTGCAGCGCGAACAG +
Preference number: 6 (lower is better)
Translates to: ESCAGVITRQPA*SQVLLHLQREQ
Trigger: CTGTTCGCGCTGCAGGTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTGTAATGACACCAGCGCAGCTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000595817.5
ENST00000596467.5
ENST00000596580.2
ENST00000596613.5
ENST00000598389.5
ENST00000599040.5
ENST00000600032.5
ENST00000601009.1
ENST00000601853.5
ENST00000602263.5
ENST00000627049.2
CDS CAA 72 bp CCTCACTTTGTGGCTCTCCCTGTGCCCTGCACGCTTTaGGCAATGTTCCGGTCTCTGTCCCCTCTGAACCTG +
Preference number: 6 (lower is better)
Translates to: PHFVALPVPCTL*AMFRSLSPLNL
Trigger: CAGGTTCAGAGGGGACAGAGACCGGAACATTGCCAAAAGCGTGCAGGGCACAGGGAGAGCCACAAAGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CAA 72 bp TGGGATGTAGCCGCTGCTTTCTGTCGCAGCCTCACTTaGTGGCTCTCCCTGTGCCCTGCACGCTTTTGGCAA +
Preference number: 6 (lower is better)
Translates to: WDVAAAFCRSLT*WLSLCPARFWQ
Trigger: TTGCCAAAAGCGTGCAGGGCACAGGGAGAGCCACAAAGTGAGGCTGCGACAGAAAGCAGCGGCTACATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS TCA 72 bp GACCCCAGAGTAACCTTAAAGCTGGGTCTGTGGCTGTaGGGGGATGGGAGGTCTGATGAGCCTGGTTACACC +
Preference number: 6 (lower is better)
Translates to: DPRVTLKLGLWL*GDGRSDEPGYT
Trigger: GGTGTAACCAGGCTCATCAGACCTCCCATCCCCTCACAGCCACAGACCCAGCTTTAAGGTTACTCTGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595817.5
CDS TCA 72 bp ACAGGCACCTGTGTCCATGCTACCTCCAAACAACTCTaGGCAGGCCTGACGCACTGGTGGCTCATTTCGTCC +
Preference number: 6 (lower is better)
Translates to: TGTCVHATSKQL*AGLTHWWLISS
Trigger: GGACGAAATGAGCCACCAGTGCGTCAGGCCTGCTCAGAGTTGTTTGGAGGTAGCATGGACACAGGTGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 72 bp TCAAGAGAGCTGCGCTGGTGTCATTACACGTCAACCTaGCTTGAGCCAAGTCCTGCTTCACCTGCAGCGCGA +
Preference number: 6 (lower is better)
Translates to: SRELRWCHYTST*LEPSPASPAAR
Trigger: TCGCGCTGCAGGTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTGTAATGACACCAGCGCAGCTCTCTTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000595817.5
ENST00000596467.5
ENST00000596580.2
ENST00000596613.5
ENST00000598389.5
ENST00000599040.5
ENST00000600032.5
ENST00000601009.1
ENST00000601853.5
ENST00000602263.5
ENST00000627049.2
CDS GCA 72 bp AGATTGATCTTCGTGCCTTCCCTGTCCTTGGCCGGGTaGAACCGGATTCCATACATCTCTAGCCGACGGGCA +
Preference number: 6 (lower is better)
Translates to: RLIFVPSLSLAG*NRIPYISSRRA
Trigger: TGCCCGTCGGCTAGAGATGTATGGAATCCGGTTGCACCCGGCCAAGGACAGGGAAGGCACGAAGATCAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000319562.11
ENST00000490389.1
ENST00000595380.5
ENST00000595437.5
ENST00000596467.5
ENST00000596580.2
ENST00000601009.1
ENST00000627049.2
CDS GCA 72 bp GCTTTCTGTCGCAGCCTCACTTTGTGGCTCTCCCTGTaGCCTGCACGCTTTTGGCAATGTTCCGGTCTCTGT +
Preference number: 6 (lower is better)
Translates to: AFCRSLTLWLSL*PARFWQCSGLC
Trigger: ACAGAGACCGGAACATTGCCAAAAGCGTGCAGGGCACAGGGAGAGCCACAAAGTGAGGCTGCGACAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CCA 72 bp CCTAAGGCTCTCAACCCACAGAACAGACCCTCCTCTTaGCCAAGGGGACCCCAGAGTAACCTTAAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: PKALNPQNRPSS*PRGPQSNLKAG
Trigger: CCCAGCTTTAAGGTTACTCTGGGGTCCCCTTGGCCAAGAGGAGGGTCTGTTCTGTGGGTTGAGAGCCTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595817.5
CDS CCA 72 bp TGTCCCAACTCATATTTGGACTTGAACTGCTGCTGCTaGGAGACAATGGGGTGGCCAGGGGGCTGTGACCAG +
Preference number: 6 (lower is better)
Translates to: CPNSYLDLNCCC*ETMGWPGGCDQ
Trigger: CTGGTCACAGCCCCCTGGCCACCCCATTGTCTCCCAGCAGCAGCAGTTCAAGTCCAAATATGAGTTGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CAA 72 bp GCACAATGCAGGACGGACTCCCCAAATTACCTGGCCTaGTCCCAGGCCTTTCAGGATCTGGACTGCAAGGCT +
Preference number: 6 (lower is better)
Translates to: AQCRTDSPNYLA*SQAFQDLDCKA
Trigger: AGCCTTGCAGTCCAGATCCTGAAAGGCCTGGGACAAGGCCAGGTAATTTGGGGAGTCCGTCCTGCATTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CAA 72 bp AGTCTGGAGACATTTTTAGATGTCCCAACTGAGGGGTaGCTGCGGGCATCTAGTGGGTGGCCAGGGATGCCG +
Preference number: 6 (lower is better)
Translates to: SLETFLDVPTEG*LRASSGWPGMP
Trigger: CGGCATCCCTGGCCACCCACTAGATGCCCGCAGCAACCCCTCAGTTGGGACATCTAAAAATGTCTCCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CAA 90 bp ATGGAGCATCTCAGTACCCAACCCGTCCAGGAGGAGCCGGTGGCTTaGAGGAAGGAGGATGAGGACACCATTGGAACTTCAAATGCCTCC +
Preference number: 6 (lower is better)
Translates to: MEHLSTQPVQEEPVA*RKEDEDTIGTSNAS
Trigger: GGAGGCATTTGAAGTTCCAATGGTGTCCTCATCCTCCTTCCTCAAAGCCACCGGCTCCTCCTGGACGGGTTGGGTACTGAGATGCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS CAA 90 bp GAACATCCTGCACAATGCAGGACGGACTCCCCAAATTACCTGGCCTaGTCCCAGGCCTTTCAGGATCTGGACTGCAAGGCTGGACCCTTT +
Preference number: 6 (lower is better)
Translates to: EHPAQCRTDSPNYLA*SQAFQDLDCKAGPF
Trigger: AAAGGGTCCAGCCTTGCAGTCCAGATCCTGAAAGGCCTGGGACAAGGCCAGGTAATTTGGGGAGTCCGTCCTGCATTGTGCAGGATGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS TCA 72 bp AGTGTGTCCGGCCATCAATACACAAGAGACTCTTTGTaGCTCAACACGTGGGGTCGCGAGGCAGAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: SVSGHQYTRDSL*LNTWGREAELV
Trigger: CACCAGCTCTGCCTCGCGACCCCACGTGTTGAGTCACAAAGAGTCTCTTGTGTATTGATGGCCGGACACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000627049.2
CDS TCA 72 bp GGAGCTCTTTGCTGCAGGAATGTCAGGAGTCACATGTaGCTGCGTGGAACCCCCATTCTTCCCTGCCAAGCT +
Preference number: 6 (lower is better)
Translates to: GALCCRNVRSHM*LRGTPILPCQA
Trigger: AGCTTGGCAGGGAAGAATGGGGGTTCCACGCAGTCACATGTGACTCCTGACATTCCTGCAGCAAAGAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602263.5
CDS TCA 72 bp TTCCGTCTGGGAAACTTAAAGCTGGGTCTGTGGCTGTaGGGGGATGGGAGGTCTGATGAGCCTGGTTACACC +
Preference number: 6 (lower is better)
Translates to: FRLGNLKLGLWL*GDGRSDEPGYT
Trigger: GGTGTAACCAGGCTCATCAGACCTCCCATCCCCTCACAGCCACAGACCCAGCTTTAAGTTTCCCAGACGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601361.1
CDS TCA 72 bp CCAAGGGAACCAGGCCGTGTTCTCAAGGCTCTCACCTaGAACACTAGAATTCCCGTGTTGGCAACGGCCAGA +
Preference number: 6 (lower is better)
Translates to: PREPGRVLKALT*NTRIPVLATAR
Trigger: TCTGGCCGTTGCCAACACGGGAATTCTAGTGTTTCAGGTGAGAGCCTTGAGAACACGGCCTGGTTCCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596467.5
CDS GCA 72 bp GCAGGCCTGACGCACTGGTGGCTCATTTCGTCCCTTTaGCAAAGTGACATCACCAGCAGAGACTCAAAGCAG +
Preference number: 6 (lower is better)
Translates to: AGLTHWWLISSL*QSDITSRDSKQ
Trigger: CTGCTTTGAGTCTCTGCTGGTGATGTCACTTTGGCAAAGGGACGAAATGAGCCACCAGTGCGTCAGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 72 bp ATCCTGCACAATGCAGGACGGACTCCCCAAATTACCTaGCCTTGTCCCAGGCCTTTCAGGATCTGGACTGCA +
Preference number: 6 (lower is better)
Translates to: ILHNAGRTPQIT*PCPRPFRIWTA
Trigger: TGCAGTCCAGATCCTGAAAGGCCTGGGACAAGGCCAGGTAATTTGGGGAGTCCGTCCTGCATTGTGCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 72 bp CCTCAGCTGTGCTGTATCTACTGGGACTTTCCAGGCTaGAGGACAACGGAGTGCCCAAAGTCACACTCACTG +
Preference number: 6 (lower is better)
Translates to: PQLCCIYWDFPG*RTTECPKSHSL
Trigger: CAGTGAGTGTGACTTTGGGCACTCCGTTGTCCTCCAGCCTGGAAAGTCCCAGTAGATACAGCACAGCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596545.5
CDS CCA 72 bp AGTTTCCGTCACGTGGGTAGAAGCAAGCTTCCTGGGTaGGGGCTAACTGTAAGCGGAGCTTCTCTAGGGATC +
Preference number: 6 (lower is better)
Translates to: SFRHVGRSKLPG*GLTVSGASLGI
Trigger: GATCCCTAGAGAAGCTCCGCTTACAGTTAGCCCCCACCCAGGAAGCTTGCTTCTACCCACGTGACGGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CCA 72 bp AGGAGGCCCCTCCCTTATCGTCAGTCTTGCTTTCTCTaGTTTCAGTTACCCCAGCAGATCCAGGCTGTCCGT +
Preference number: 6 (lower is better)
Translates to: RRPLPYRQSCFL*FQLPQQIQAVR
Trigger: ACGGACAGCCTGGATCTGCTGGGGTAACTGAAACCAGAGAAAGCAAGACTGACGATAAGGGAGGGGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595366.5
CDS CAA 72 bp GAGGGCTCAGCAGGGCAAACTGCACAAGTAGTCGGCTaGGGGATGCAATTTGCAGAGGCCCAGGATCTCTAT +
Preference number: 6 (lower is better)
Translates to: EGSAGQTAQVVG*GMQFAEAQDLY
Trigger: ATAGAGATCCTGGGCCTCTGCAAATTGCATCCCCAAGCCGACTACTTGTGCAGTTTGCCCTGCTGAGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CAA 90 bp TGTGAGGGGATGGGAGGTCTGATGAGCCTGGTTACACCCCCATCCTaGCTTGCTAAAGGCCACAGGCTTTCTTCCCTAAGGGCTGAACAA +
Preference number: 6 (lower is better)
Translates to: CEGMGGLMSLVTPPS*LAKGHRLSSLRAEQ
Trigger: TTGTTCAGCCCTTAGGGAAGAAAGCCTGTGGCCTTTAGCAAGCAAGGATGGGGGTGTAACCAGGCTCATCAGACCTCCCATCCCCTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601361.1
CDS CAA 90 bp TCTCTGACTTATTACATCTACCAGGAAGATTCCGCATGTATGGCCTaGGCGAGGTGGGGGACCAGCGTTCATAAGGAGGACCCTGGTCCG +
Preference number: 6 (lower is better)
Translates to: SLTYYIYQEDSACMA*ARWGTSVHKEDPGP
Trigger: CGGACCAGGGTCCTCCTTATGAACGCTGGTCCCCCACCTCGCCAAGGCCATACATGCGGAATCTTCCTGGTAGATGTAATAAGTCAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CAA 90 bp TTCAGTGCTCTTGGAGTACAGGAGGCCCCTCCCTTATCGTCAGTCTaGCTTTCTCTGGTTTCAGTTACCCCAGCAGATCCAGGCTGTCCG +
Preference number: 6 (lower is better)
Translates to: FSALGVQEAPPLSSV*LSLVSVTPADPGCP
Trigger: CGGACAGCCTGGATCTGCTGGGGTAACTGAAACCAGAGAAAGCAAGACTGACGATAAGGGAGGGGCCTCCTGTACTCCAAGAGCACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595366.5
CDS TCA 72 bp GTGTCCATGCTACCTCCAAACAACTCTGAGCAGGCCTaGCGCACTGGTGGCTCATTTCGTCCCTTTGCCAAA +
Preference number: 6 (lower is better)
Translates to: VSMLPPNNSEQA*RTGGSFRPFAK
Trigger: TTTGGCAAAGGGACGAAATGAGCCACCAGTGCGTCAGGCCTGCTCAGAGTTGTTTGGAGGTAGCATGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS TCA 72 bp TCGAGGGCTCCCGCTCATATCAAAGGTGATGTCTGCTaGATCGTCATCAAGGAATTCTCCGGAAGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: SRAPAHIKGDVC*IVIKEFSGRRP
Trigger: CGGCCTCCTTCCGGAGAATTCCTTGATGACGATTCAGCAGACATCACCTTTGATATGAGCGGGAGCCCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 72 bp GCCTTGGGAGTCGAGGGCTCCCGCTCATATCAAAGGTaGTGTCTGCTGAATCGTCATCAAGGAATTCTCCGG +
Preference number: 6 (lower is better)
Translates to: ALGVEGSRSYQR*CLLNRHQGILR
Trigger: CCGGAGAATTCCTTGATGACGATTCAGCAGACATCACCTTTGATATGAGCGGGAGCCCTCGACTCCCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS GCA 72 bp GAAATTCTCCATCTTGATCATCGTACCGTGGAGCTGTaGCACCATCTCCGTGATCTCTGCCAAAGCGGCTCG +
Preference number: 6 (lower is better)
Translates to: EILHLDHRTVEL*HHLRDLCQSGS
Trigger: CGAGCCGCTTTGGCAGAGATCACGGAGATGGTGGCACAGCTCCACGGTACGATGATCAAGATGGAGAATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000423063.2
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS GCA 72 bp ATCTACTGGGACTTTCCAGGCTGGAGGACAACGGAGTaGCCAAAGTCACACTCACTGGAGGCAAGCTACTTC +
Preference number: 6 (lower is better)
Translates to: IYWDFPGWRTTE*PKSHSLEASYF
Trigger: GAAGTAGCTTGCCTCCAGTGAGTGTGACTTTGGGCACTCCGTTGTCCTCCAGCCTGGAAAGTCCCAGTAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596545.5
CDS GCA 72 bp CCCTGTGGGCAGAAGGGATTGATATACCTGCACACCTaGACCTCAGCTGTGCTGTATCTACTGGGACTTTCC +
Preference number: 6 (lower is better)
Translates to: PCGQKGLIYLHT*TSAVLYLLGLS
Trigger: GGAAAGTCCCAGTAGATACAGCACAGCTGAGGTGCAGGTGTGCAGGTATATCAATCCCTTCTGCCCACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596545.5
CDS CCA 72 bp CCCTCCTTCCCTAACTGGGAGAGATGCAGGGTTGCTTaGCTAGCCAGGACTAAAAGCAATCCTGACAGACTC +
Preference number: 6 (lower is better)
Translates to: PSFPNWERCRVA*LARTKSNPDRL
Trigger: GAGTCTGTCAGGATTGCTTTTAGTCCTGGCTAGCCAAGCAACCCTGCATCTCTCCCAGTTAGGGAAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600190.1
CDS CCA 72 bp ATTACATCTACCAGGAAGATTCCGCATGTATGGCCTTaGCGAGGTGGGGGACCAGCGTTCATAAGGAGGACC +
Preference number: 6 (lower is better)
Translates to: ITSTRKIPHVWP*RGGGPAFIRRT
Trigger: GGTCCTCCTTATGAACGCTGGTCCCCCACCTCGCCAAGGCCATACATGCGGAATCTTCCTGGTAGATGTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CAA 72 bp ATGGGAGGTCTGATGAGCCTGGTTACACCCCCATCCTaGCTTGCTAAAGGCCACAGGCTTTCTTCCCTAAGG +
Preference number: 6 (lower is better)
Translates to: MGGLMSLVTPPS*LAKGHRLSSLR
Trigger: CCTTAGGGAAGAAAGCCTGTGGCCTTTAGCAAGCAAGGATGGGGGTGTAACCAGGCTCATCAGACCTCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601361.1
CDS TCA 72 bp GAAACTCGAGGCCAAAATAGTCACCTTCCACGAGGTTaGGGTGGTTGCAAACTGCATCCAGCAGCACCTTCC +
Preference number: 6 (lower is better)
Translates to: ETRGQNSHLPRG*GGCKLHPAAPS
Trigger: GGAAGGTGCTGCTGGATGCAGTTTGCAACCACCTCAACCTCGTGGAAGGTGACTATTTTGGCCTCGAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000319562.11
ENST00000595380.5
ENST00000595437.5
ENST00000595817.5
ENST00000596467.5
ENST00000596580.2
ENST00000596613.5
ENST00000598389.5
ENST00000599040.5
ENST00000600032.5
ENST00000601133.5
ENST00000601853.5
ENST00000602263.5
ENST00000627049.2
CDS TCA 72 bp GACGCACTGGTGGCTCATTTCGTCCCTTTGCCAAAGTaGCATCACCAGCAGAGACTCAAAGCAGTTGCACCA +
Preference number: 6 (lower is better)
Translates to: DALVAHFVPLPK*HHQQRLKAVAP
Trigger: TGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGTCACTTTGGCAAAGGGACGAAATGAGCCACCAGTGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 72 bp CCTGCGAGTTCACAGACAGCTCGGAAAGGTGAGGACTaGCAGTCAGGGAGCCTTGTTCTTACTTATGAGGAA +
Preference number: 6 (lower is better)
Translates to: PASSQTARKGED*QSGSLVLTYEE
Trigger: TTCCTCATAAGTAAGAACAAGGCTCCCTGACTGGCAGTCCTCACCTTTCCGAGCTGTCTGTGAACTCGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457029.3
CDS GCA 72 bp CCAGCCTTGGCCTCCCAGGAGATGGGACTACAGGCTTaGACCACCACGCCCAAATCTCCCTTTTTATATATT +
Preference number: 6 (lower is better)
Translates to: PALASQEMGLQA*TTTPKSPFLYI
Trigger: AATATATAAAAAGGGAGATTTGGGCGTGGTGGTGCAAGCCTGTAGTCCCATCTCCTGGGAGGCCAAGGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS GCA 72 bp GCCGAGCCCTTGAACATTTCATCTATGAGAGAGCTATaGCTTGGGAGTCGAGGGCTCCCGCTCATATCAAAG +
Preference number: 6 (lower is better)
Translates to: AEPLNISSMREL*LGSRGLPLISK
Trigger: CTTTGATATGAGCGGGAGCCCTCGACTCCCAAGGCATAGCTCTCTCATAGATGAAATGTTCAAGGGCTCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CCA 72 bp CAGGTGGCCCTTCCTAGGGCAGAAGTTGTCCTTCAGTaGATGATAATGTCAGTCTTCCCTAGAGTTGAGGGC +
Preference number: 6 (lower is better)
Translates to: QVALPRAEVVLQ*MIMSVFPRVEG
Trigger: GCCCTCAACTCTAGGGAAGACTGACATTATCATCCACTGAAGGACAACTTCTGCCCTAGGAAGGGCCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 72 bp TTCGCCCCTCCTCCCTGGACAGCAGATAGACACCGCTaGTCAGATCACCCTCATAATTGTCATTTGTTTGGG +
Preference number: 6 (lower is better)
Translates to: FAPPPWTADRHR*SDHPHNCHLFG
Trigger: CCCAAACAAATGACAATTATGAGGGTGATCTGACCAGCGGTGTCTATCTGCTGTCCAGGGAGGAGGGGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CAA 72 bp GTATCCTGGTACGCACTATTGGCATCTGGCCGGAGCTaGATGAGAAAGCGCTTCCTCTTGAAGCTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: VSWYALLASGRS*MRKRFLLKLSF
Trigger: GAAGCTGAGCTTCAAGAGGAAGCGCTTTCTCATCAAGCTCCGGCCAGATGCCAATAGTGCGTACCAGGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596580.2
ENST00000627049.2
CDS CAA 72 bp TATTACATCTACCAGGAAGATTCCGCATGTATGGCCTaGGCGAGGTGGGGGACCAGCGTTCATAAGGAGGAC +
Preference number: 6 (lower is better)
Translates to: YYIYQEDSACMA*ARWGTSVHKED
Trigger: GTCCTCCTTATGAACGCTGGTCCCCCACCTCGCCAAGGCCATACATGCGGAATCTTCCTGGTAGATGTAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CAA 90 bp ACTGAAACGCAACGTTCATCCTCTTCCTCATACTTCGTGTCAATGTaGGCTCTTACGTCGTTTCTCTGTGAAGTCGCCCACGGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: TETQRSSSSSYFVSM*ALTSFLCEVAHGSG
Trigger: CCCGGAGCCGTGGGCGACTTCACAGAGAAACGACGTAAGAGCCAACATTGACACGAAGTATGAGGAAGAGGATGAACGTTGCGTTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS CAA 90 bp GACCAGATGCAATGCTCTAGGGCTTTACCCTGTGGGCAGAAGGGATaGATATACCTGCACACCTGCACCTCAGCTGTGCTGTATCTACTG +
Preference number: 6 (lower is better)
Translates to: DQMQCSRALPCGQKG*IYLHTCTSAVLYLL
Trigger: CAGTAGATACAGCACAGCTGAGGTGCAGGTGTGCAGGTATATCAATCCCTTCTGCCCACAGGGTAAAGCCCTAGAGCATTGCATCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596545.5
CDS CCA 72 bp ACTTCTCAATTAGATGTGAATGGTGCTTGGGCTTCATaGAGCATCTCAGTACCCAACCCGTCCAGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: TSQLDVNGAWAS*SISVPNPSRRS
Trigger: GCTCCTCCTGGACGGGTTGGGTACTGAGATGCTCCATGAAGCCCAAGCACCATTCACATCTAATTGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS CCA 72 bp CTCTCCTCTTCTCCAGGCATGCTTATCCAGAGGAAATaGGTCAGGAGAGCAGAGTGGAACACTGATCACCAA +
Preference number: 6 (lower is better)
Translates to: LSSSPGMLIQRK*VRRAEWNTDHQ
Trigger: TTGGTGATCAGTGTTCCACTCTGCTCTCCTGACCCATTTCCTCTGGATAAGCATGCCTGGAGAAGAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602263.5
CDS CCA 72 bp CCAAGCCCATCCATGGCCTCCGGGGTAAATGCTACCTaGCTAAGGATGAGTGGATCTGTCTCTGACTTATTA +
Preference number: 6 (lower is better)
Translates to: PSPSMASGVNAT*LRMSGSVSDLL
Trigger: TAATAAGTCAGAGACAGATCCACTCATCCTTAGCCAGGTAGCATTTACCCCGGAGGCCATGGATGGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS TCA 72 bp CTGCTCCAGCACTTCCGAATTCAGTTCTGTAGGCTGTaGAGCAAGGCTCCGGATAGAATGAATCTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: LLQHFRIQFCRL*SKAPDRMNLAV
Trigger: CACAGCAAGATTCATTCTATCCGGAGCCTTGCTTCACAGCCTACAGAACTGAATTCGGAAGTGCTGGAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000596580.2
ENST00000600190.1
ENST00000627049.2
CDS TCA 72 bp ATCGCCGATTCTTTGGTAATCTCTGATTTGGGCATTTaGGCGGCCTTCCCACAGGGCAAGTCGTTGCTCAAT +
Preference number: 6 (lower is better)
Translates to: IADSLVISDLGI*AAFPQGKSLLN
Trigger: ATTGAGCAACGACTTGCCCTGTGGGAAGGCCGCTCAAATGCCCAAATCAGAGATTACCAAAGAATCGGCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000457029.3
ENST00000595437.5
ENST00000627049.2
CDS TCA 72 bp CCATCATATGCAGGCGAAGTTCTTCAACCTTGTCTCTaGAGCACAGCTTTTCCCCAAGAACCGATCCAGCAG +
Preference number: 6 (lower is better)
Translates to: PSYAGEVLQPCL*STAFPQEPIQQ
Trigger: CTGCTGGATCGGTTCTTGGGGAAAAGCTGTGCTTCAGAGACAAGGTTGAAGAACTTCGCCTGCATATGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427404.5
CDS TCA 72 bp TCTTACAAGCTATGTTCTGTGGCCATGGTAGAGGGATaGGTTTCCGTCACGTGGGTAGAAGCAAGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: SYKLCSVAMVEG*VSVTWVEASFL
Trigger: CAGGAAGCTTGCTTCTACCCACGTGACGGAAACTCATCCCTCTACCATGGCCACAGAACATAGCTTGTAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS GCA 72 bp TACCTGGCCTTGTCCCAGGCCTTTCAGGATCTGGACTaGAAGGCTGGACCCTTTGTCACAATAATAGCAAAA +
Preference number: 6 (lower is better)
Translates to: YLALSQAFQDLD*KAGPFVTIIAK
Trigger: TTTTGCTATTATTGTGACAAAGGGTCCAGCCTTGCAGTCCAGATCCTGAAAGGCCTGGGACAAGGCCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 72 bp CCATACATCTCTAGCCGACGGGCAATCTCTAGGAGCTaGAAATCTGATTCTGCTGGTGTTTGTCCAATGTGG +
Preference number: 6 (lower is better)
Translates to: PYISSRRAISRS*KSDSAGVCPMW
Trigger: CCACATTGGACAAACACCAGCAGAATCAGATTTCCAGCTCCTAGAGATTGCCCGTCGGCTAGAGATGTATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000319562.11
ENST00000490389.1
ENST00000593548.1
ENST00000595380.5
ENST00000595437.5
ENST00000596467.5
ENST00000596580.2
ENST00000599040.5
ENST00000601009.1
ENST00000602263.5
ENST00000627049.2
CDS CCA 72 bp AGCTTCTGGAAATTCTCCATCTTGATCATCGTACCGTaGAGCTGTGCCACCATCTCCGTGATCTCTGCCAAA +
Preference number: 6 (lower is better)
Translates to: SFWKFSILIIVP*SCATISVISAK
Trigger: TTTGGCAGAGATCACGGAGATGGTGGCACAGCTCCACGGTACGATGATCAAGATGGAGAATTTCCAGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000423063.2
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS CCA 72 bp GAGGATGAGGACACCATTGGAACTTCAAATGCCTCCTaGGTGTCATCCAGCATCTGGATTTTGATGGACACG +
Preference number: 6 (lower is better)
Translates to: EDEDTIGTSNAS*VSSSIWILMDT
Trigger: CGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAATGGTGTCCTCATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS CCA 72 bp CCTCTCCAAACTTCTCAATTAGATGTGAATGGTGCTTaGGCTTCATGGAGCATCTCAGTACCCAACCCGTCC +
Preference number: 6 (lower is better)
Translates to: PLQTSQLDVNGA*ASWSISVPNPS
Trigger: GGACGGGTTGGGTACTGAGATGCTCCATGAAGCCCAAGCACCATTCACATCTAATTGAGAAGTTTGGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS CCA 72 bp TTCCCCAAGAACCGATACACTGCCGTCTTTCTCTGCTaGAAGGCACACTCCCTCAGGATATGGATCTTGTTT +
Preference number: 6 (lower is better)
Translates to: FPKNRYTAVFLC*KAHSLRIWILF
Trigger: AAACAAGATCCATATCCTGAGGGAGTGTGCCTTCCAGCAGAGAAAGACGGCAGTGTATCGGTTCTTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593990.1
CDS CAA 72 bp GTTTGGGTGGCACTCAAGTCCCCAGCGGCTGAGCACTaGGGTAGTTTGGTCAAGAAAAGCAAGAAATACTTG +
Preference number: 6 (lower is better)
Translates to: VWVALKSPAAEH*GSLVKKSKKYL
Trigger: CAAGTATTTCTTGCTTTTCTTGACCAAACTACCCAAGTGCTCAGCCGCTGGGGACTTGAGTGCCACCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CAA 90 bp AGAATTCTGTCCTCTCCAAACTTCTCAATTAGATGTGAATGGTGCTaGGGCTTCATGGAGCATCTCAGTACCCAACCCGTCCAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: RILSSPNFSIRCEWC*GFMEHLSTQPVQEE
Trigger: CTCCTCCTGGACGGGTTGGGTACTGAGATGCTCCATGAAGCCCAAGCACCATTCACATCTAATTGAGAAGTTTGGAGAGGACAGAATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS CAA 90 bp TGCATAGTGAGGCCACTGCTGCTTACCCTTCCCGGAACCACAAGATaGTCAATGCCAATCAAATCTTTCTTGAGTTCGTGCAGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: CIVRPLLLTLPGTTR*SMPIKSFLSSCSFW
Trigger: CCAGAAGCTGCACGAACTCAAGAAAGATTTGATTGGCATTGACAATCTTGTGGTTCCGGGAAGGGTAAGCAGCAGTGGCCTCACTATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423063.2
CDS CAA 90 bp GGAGAGCAGAGTGGAACACTGATCACCAATCTTATCTTCACCACTTaGCTACAGCAATGTGCCCTGTTTCCGACACACAGGGTCAGACAA +
Preference number: 6 (lower is better)
Translates to: GEQSGTLITNLIFTT*LQQCALFPTHRVRQ
Trigger: TTGTCTGACCCTGTGTGTCGGAAACAGGGCACATTGCTGTAGCAAAGTGGTGAAGATAAGATTGGTGATCAGTGTTCCACTCTGCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602263.5
CDS TCA 72 bp CCATCATATGCAGGCGAAGTTCTTCAACCTTGTCTCTaGAGCACAGCTTTTCCCCAAGAACCGATACACTGC +
Preference number: 6 (lower is better)
Translates to: PSYAGEVLQPCL*STAFPQEPIHC
Trigger: GCAGTGTATCGGTTCTTGGGGAAAAGCTGTGCTTCAGAGACAAGGTTGAAGAACTTCGCCTGCATATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593990.1
CDS TCA 72 bp ATCAGAGGTCTTAGCCCACTGAATATGAATCAGAGTTaGAGGGCCAGCTCTTCTCTCTCTGTCACCAAGGGA +
Preference number: 6 (lower is better)
Translates to: IRGLSPLNMNQS*RASSSLSVTKG
Trigger: TCCCTTGGTGACAGAGAGAGAAGAGCTGGCCCTTCAACTCTGATTCATATTCAGTGGGCTAAGACCTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596467.5
CDS GCA 72 bp CTGTCCTCTCCAAACTTCTCAATTAGATGTGAATGGTaGTTGGGCTTCATGGAGCATCTCAGTACCCAACCC +
Preference number: 6 (lower is better)
Translates to: LSSPNFSIRCEW*LGFMEHLSTQP
Trigger: GGGTTGGGTACTGAGATGCTCCATGAAGCCCAAGCACCATTCACATCTAATTGAGAAGTTTGGAGAGGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS GCA 72 bp GGGGAACATCAGAAGGGCCAGATCTCAGAGACGGGATaGCAGGATACATTTATCAATTGTGGTGATGTGAGA +
Preference number: 6 (lower is better)
Translates to: GEHQKGQISETG*QDTFINCGDVR
Trigger: TCTCACATCACCACAATTGATAAATGTATCCTGGCATCCCGTCTCTGAGATCTGGCCCTTCTGATGTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490389.1
CDS CCA 72 bp CAGATTGCACAATGTGTGAAATCAAGAGAGCTGCGCTaGTGTCATTACACGTCAACCTGCCTTGAGCCAAGT +
Preference number: 6 (lower is better)
Translates to: QIAQCVKSRELR*CHYTSTCLEPS
Trigger: ACTTGGCTCAAGGCAGGTTGACGTGTAATGACACCAGCGCAGCTCTCTTGATTTCACACATTGTGCAATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000319562.11
ENST00000595437.5
ENST00000595817.5
ENST00000596467.5
ENST00000596580.2
ENST00000598389.5
ENST00000599040.5
ENST00000600032.5
ENST00000601009.1
ENST00000602263.5
ENST00000627049.2
CDS CCA 72 bp CTTGTCCCAGGCCTTTCAGGATCTGGACTGCAAGGCTaGACCCTTTGTCACAATAATAGCAAAATCCCAACT +
Preference number: 6 (lower is better)
Translates to: LVPGLSGSGLQG*TLCHNNSKIPT
Trigger: AGTTGGGATTTTGCTATTATTGTGACAAAGGGTCCAGCCTTGCAGTCCAGATCCTGAAAGGCCTGGGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 72 bp TTTGGGTGGCACTCAAGTCCCCAGCGGCTGAGCACTTaGGTAGTTTGGTCAAGAAAAGCAAGAAATACTTGT +
Preference number: 6 (lower is better)
Translates to: FGWHSSPQRLST*VVWSRKARNTC
Trigger: ACAAGTATTTCTTGCTTTTCTTGACCAAACTACCCAAGTGCTCAGCCGCTGGGGACTTGAGTGCCACCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CAA 72 bp CCCAGACGGATGAACTCCCTTCCCGGAACCACAAGATaGTCAATGCCAATCAAATCTTTCTTGAGTTCGTGC +
Preference number: 6 (lower is better)
Translates to: PRRMNSLPGTTR*SMPIKSFLSSC
Trigger: GCACGAACTCAAGAAAGATTTGATTGGCATTGACAATCTTGTGGTTCCGGGAAGGGAGTTCATCCGTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS CAA 72 bp TCCTCTCCAAACTTCTCAATTAGATGTGAATGGTGCTaGGGCTTCATGGAGCATCTCAGTACCCAACCCGTC +
Preference number: 6 (lower is better)
Translates to: SSPNFSIRCEWC*GFMEHLSTQPV
Trigger: GACGGGTTGGGTACTGAGATGCTCCATGAAGCCCAAGCACCATTCACATCTAATTGAGAAGTTTGGAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS CAA 72 bp AGGCCACTGCTGCTTACCCTTCCCGGAACCACAAGATaGTCAATGCCAATCAAATCTTTCTTGAGTTCGTGC +
Preference number: 6 (lower is better)
Translates to: RPLLLTLPGTTR*SMPIKSFLSSC
Trigger: GCACGAACTCAAGAAAGATTTGATTGGCATTGACAATCTTGTGGTTCCGGGAAGGGTAAGCAGCAGTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423063.2
CDS CAA 72 bp CAACGTTCATCCTCTTCCTCATACTTCGTGTCAATGTaGGCTCTTACGTCGTTTCTCTGTGAAGTCGCCCAC +
Preference number: 6 (lower is better)
Translates to: QRSSSSSYFVSM*ALTSFLCEVAH
Trigger: GTGGGCGACTTCACAGAGAAACGACGTAAGAGCCAACATTGACACGAAGTATGAGGAAGAGGATGAACGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601009.1
CDS CAA 72 bp AGGGAAAAGGAGCCAGGCCTTCCCGGAACCACAAGATaGTCAATGCCAATCAAATCTTTCTTGAGTTCGTGC +
Preference number: 6 (lower is better)
Translates to: REKEPGLPGTTR*SMPIKSFLSSC
Trigger: GCACGAACTCAAGAAAGATTTGATTGGCATTGACAATCTTGTGGTTCCGGGAAGGCCTGGCTCCTTTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595437.5
ENST00000627049.2
CDS CAA 90 bp CATCCCAGAATGCAAAATGGTGCAGCCACTAGGCGAAGTTTAAACTaGCAGAATGAACGTGTCACATCACAAGCTGTGATAGGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: HPRMQNGAATRRSLN*QNERVTSQAVIGSA
Trigger: TGCGCTGCCTATCACAGCTTGTGATGTGACACGTTCATTCTGCAAGTTTAAACTTCGCCTAGTGGCTGCACCATTTTGCATTCTGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602171.5
CDS CAA 90 bp GTCCTAATAAGGGAAAAGGAGCCAGGCCTTCCCGGAACCACAAGATaGTCAATGCCAATCAAATCTTTCTTGAGTTCGTGCAGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: VLIREKEPGLPGTTR*SMPIKSFLSSCSFW
Trigger: CCAGAAGCTGCACGAACTCAAGAAAGATTTGATTGGCATTGACAATCTTGTGGTTCCGGGAAGGCCTGGCTCCTTTTCCCTTATTAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595437.5
ENST00000627049.2
CDS CAA 90 bp TTCCCATTGTCATCTTCCATCATATGCAGGCGAAGTTCTTCAACCTaGTCTCTGAAGCACAGCTTTTCCCCAAGAACCGATACACTGCCG +
Preference number: 6 (lower is better)
Translates to: FPLSSSIICRRSSST*SLKHSFSPRTDTLP
Trigger: CGGCAGTGTATCGGTTCTTGGGGAAAAGCTGTGCTTCAGAGACAAGGTTGAAGAACTTCGCCTGCATATGATGGAAGATGACAATGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593990.1
CDS CAA 90 bp GTTTGGGTGGCACTCAAGTCCCCAGCGGCTGAGCACTTGGGTAGTTaGGTCAAGAAAAGCAAGAAATACTTGTTGACTGAACTTCAGTCT +
Preference number: 6 (lower is better)
Translates to: VWVALKSPAAEHLGS*VKKSKKYLLTELQS
Trigger: AGACTGAAGTTCAGTCAACAAGTATTTCTTGCTTTTCTTGACCAAACTACCCAAGTGCTCAGCCGCTGGGGACTTGAGTGCCACCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CAA 90 bp GATTCCACACACTGGAGGATGATGCAACCTAGGCGAAGTTTAAACTaGCAGAATGAACGTGTCACATCACAAGCTGTGATAGGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: DSTHWRMMQPRRSLN*QNERVTSQAVIGSA
Trigger: TGCGCTGCCTATCACAGCTTGTGATGTGACACGTTCATTCTGCAAGTTTAAACTTCGCCTAGGTTGCATCATCCTCCAGTGTGTGGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598346.5
CDS CAA 90 bp TTCCCATTGTCATCTTCCATCATATGCAGGCGAAGTTCTTCAACCTaGTCTCTGAAGCACAGCTTTTCCCCAAGAACCGATCCAGCAGAT +
Preference number: 6 (lower is better)
Translates to: FPLSSSIICRRSSST*SLKHSFSPRTDPAD
Trigger: ATCTGCTGGATCGGTTCTTGGGGAAAAGCTGTGCTTCAGAGACAAGGTTGAAGAACTTCGCCTGCATATGATGGAAGATGACAATGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427404.5
CDS CAA 90 bp TTCCCATTGTCATCTTCCATCATATGCAGGCGAAGTTCTTCAACCTaGTCTCTGAAGCACAGCTTTTCCCCAAGAACCGATCTAGGCGAA +
Preference number: 6 (lower is better)
Translates to: FPLSSSIICRRSSST*SLKHSFSPRTDLGE
Trigger: TTCGCCTAGATCGGTTCTTGGGGAAAAGCTGTGCTTCAGAGACAAGGTTGAAGAACTTCGCCTGCATATGATGGAAGATGACAATGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000457431.1
ENST00000594657.1
ENST00000595366.5
ENST00000601762.5
CDS TCA 72 bp CCATCATATGCAGGCGAAGTTCTTCAACCTTGTCTCTaGAGCACAGCTTTTCCCCAAGAACCGATCACTTTC +
Preference number: 6 (lower is better)
Translates to: PSYAGEVLQPCL*STAFPQEPITF
Trigger: GAAAGTGATCGGTTCTTGGGGAAAAGCTGTGCTTCAGAGACAAGGTTGAAGAACTTCGCCTGCATATGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599151.5
CDS TCA 72 bp CTTAGGCCTGACTGTTGCATTTCTTTCTTGGCTAAATaGAGTCTGCAGTCCCTGCCATTACACCATGTAGGC +
Preference number: 6 (lower is better)
Translates to: LRPDCCISFLAK*SLQSLPLHHVG
Trigger: GCCTACATGGTGTAATGGCAGGGACTGCAGACTTCATTTAGCCAAGAAAGAAATGCAACAGTCAGGCCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS TCA 72 bp TGGCCAGCATGGTTTGTTTTAAAGACAGATGGTCAATaGCAAACCATGTCAGGAGGCACCTGTGTTCCCCTT +
Preference number: 6 (lower is better)
Translates to: WPAWFVLKTDGQ*QTMSGGTCVPL
Trigger: AAGGGGAACACAGGTGCCTCCTGACATGGTTTGTCATTGACCATCTGTCTTTAAAACAAACCATGCTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS TCA 72 bp CTGGTGGGCATCCAATATTTAAAAGAAGCTAGTGCCTaGTTAATACAAGCTTGGGTGGCACGCAAGTCCCCA +
Preference number: 6 (lower is better)
Translates to: LVGIQYLKEASA*LIQAWVARKSP
Trigger: TGGGGACTTGCGTGCCACCCAAGCTTGTATTAATCAGGCACTAGCTTCTTTTAAATATTGGATGCCCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS GCA 72 bp CAAAGGTTCAAAATTCGGGAATATGAGACTTTTCAGTaGTTCCGGCATGGCGTCCTCTTTGCTCACTGTGCT +
Preference number: 6 (lower is better)
Translates to: QRFKIREYETFQ*FRHGVLFAHCA
Trigger: AGCACAGTGAGCAAAGAGGACGCCATGCCGGAAGCACTGAAAAGTCTCATATTCCCGAATTTTGAACCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000457029.3
ENST00000595437.5
ENST00000627049.2
CDS CCA 72 bp GTCTTTCTCTGCTGGAAGGCACACTCCCTCAGGATATaGATCTTGTTTTGTTCACGAGAACAGCATGATGCA +
Preference number: 6 (lower is better)
Translates to: VFLCWKAHSLRI*ILFCSREQHDA
Trigger: TGCATCATGCTGTTCTCGTGAACAAAACAAGATCCATATCCTGAGGGAGTGTGCCTTCCAGCAGAGAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000593990.1
ENST00000596613.5
ENST00000599151.5
ENST00000602015.5
ENST00000602272.5
CDS CCA 72 bp CTTATTGCACAATGTGTGAAATCAAGAGAGCTGCGCTaGTGTCATTACACGTCAACCTGCCTTGAGCCAAGT +
Preference number: 6 (lower is better)
Translates to: LIAQCVKSRELR*CHYTSTCLEPS
Trigger: ACTTGGCTCAAGGCAGGTTGACGTGTAATGACACCAGCGCAGCTCTCTTGATTTCACACATTGTGCAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601853.5
CDS CCA 72 bp CATTGGGTACTGTTTAGAGAAATAGCAGAGTGGAACTaGATGAGTCCGCCAAGAACAGCGCCTTCAAAACCA +
Preference number: 6 (lower is better)
Translates to: HWVLFREIAEWN*MSPPRTAPSKP
Trigger: TGGTTTTGAAGGCGCTGTTCTTGGCGGACTCATCCAGTTCCACTCTGCTATTTCTCTAAACAGTACCCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CAA 72 bp AGTGGAACACTGATCACCAATCTTATCTTCACCACTTaGCTACAGCAATGTGCCCTGTTTCCGACACACAGG +
Preference number: 6 (lower is better)
Translates to: SGTLITNLIFTT*LQQCALFPTHR
Trigger: CCTGTGTGTCGGAAACAGGGCACATTGCTGTAGCAAAGTGGTGAAGATAAGATTGGTGATCAGTGTTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602263.5
CDS CAA 72 bp AGCAGGACGTCGTTGAACCTTCCCGGAACCACAAGATaGTCAATGCCAATCAAATCTTTCTTGAGTTCGTGC +
Preference number: 6 (lower is better)
Translates to: SRTSLNLPGTTR*SMPIKSFLSSC
Trigger: GCACGAACTCAAGAAAGATTTGATTGGCATTGACAATCTTGTGGTTCCGGGAAGGTTCAACGACGTCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596256.1
CDS CAA 90 bp TTCCCATTGTCATCTTCCATCATATGCAGGCGAAGTTCTTCAACCTaGTCTCTGAAGCACAGCTTTTCCCCAAGAACCGATCCCTTAGAA +
Preference number: 6 (lower is better)
Translates to: FPLSSSIICRRSSST*SLKHSFSPRTDPLE
Trigger: TTCTAAGGGATCGGTTCTTGGGGAAAAGCTGTGCTTCAGAGACAAGGTTGAAGAACTTCGCCTGCATATGATGGAAGATGACAATGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598698.5
CDS TCA 72 bp GAAGCGAATCACCCCGTAAGGAGAAAAAGCAGAATATaGGGTCAGAGGATTGCTTTATCTCCTCCGAACACA +
Preference number: 6 (lower is better)
Translates to: EANHPVRRKSRI*GQRIALSPPNT
Trigger: TGTGTTCGGAGGAGATAAAGCAATCCTCTGACCTCATATTCTGCTTTTTCTCCTTACGGGGTGATTCGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423063.2
CDS TCA 72 bp AGAGACGGGATGCCAGGATACATTTATCAATTGTGGTaGTGTGAGAAGACAGTTTTCTCCCCTCCTCATCTC +
Preference number: 6 (lower is better)
Translates to: RDGMPGYIYQLW*CEKTVFSPPHL
Trigger: GAGATGAGGAGGGGAGAAAACTGTCTTCTCACATCACCACAATTGATAAATGTATCCTGGCATCCCGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490389.1
CDS GCA 72 bp TGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTaGAATGCTGTCCCATTTGGTAAAGTCTGGAGACAT +
Preference number: 6 (lower is better)
Translates to: CVFALYRCFSNG*NAVPFGKVWRH
Trigger: ATGTCTCCAGACTTTACCAAATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594346.1
CDS CCA 72 bp CATCAAAATCCCCAATCTCAGCTTGTGAGTTCTTCTTaGAGTTGTGTGTGGTCAGGCGGAAAGAATTTCACC +
Preference number: 6 (lower is better)
Translates to: HQNPQSQLVSSS*SCVWSGGKNFT
Trigger: GGTGAAATTCTTTCCGCCTGACCACACACAACTCCAAGAAGAACTCACAAGCTGAGATTGGGGATTTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595380.5
CDS CCA 72 bp AGGCCTTGCTCGATTTTCAGACATGACCACCCAGTTTaGTCCAATAAACATTTACTTGGCATCCAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: RPCSIFRHDHPV*SNKHLLGIQCS
Trigger: TGAGCACTGGATGCCAAGTAAATGTTTATTGGACCAAACTGGGTGGTCATGTCTGAAAATCGAGCAAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CAA 72 bp TCATCTTCCATCATATGCAGGCGAAGTTCTTCAACCTaGTCTCTGAAGCACAGCTTTTCCCCAAGAACCGAT +
Preference number: 6 (lower is better)
Translates to: SSSIICRRSSST*SLKHSFSPRTD
Trigger: ATCGGTTCTTGGGGAAAAGCTGTGCTTCAGAGACAAGGTTGAAGAACTTCGCCTGCATATGATGGAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427404.5
ENST00000457431.1
ENST00000593990.1
ENST00000594657.1
ENST00000595366.5
ENST00000598698.5
ENST00000599151.5
ENST00000601762.5
CDS CAA 72 bp CCTTCCCAGGAGCTCTTTGCTAGGCGAAGTTTAAACTaGCAGAATGAACGTGTCACATCACAAGCTGTGATA +
Preference number: 6 (lower is better)
Translates to: PSQELFARRSLN*QNERVTSQAVI
Trigger: TATCACAGCTTGTGATGTGACACGTTCATTCTGCAAGTTTAAACTTCGCCTAGCAAAGAGCTCCTGGGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595817.5
ENST00000600032.5
ENST00000601133.5
CDS CAA 72 bp TGGAGTGAAATCATAAAAGTCAAGCCTGGTAACAACTaGAAAGAAGTCAGCCCTGCCCGGTACCGTGATCTT +
Preference number: 6 (lower is better)
Translates to: WSEIIKVKPGNN*KEVSPARYRDL
Trigger: AAGATCACGGTACCGGGCAGGGCTGACTTCTTTCAAGTTGTTACCAGGCTTGACTTTTATGATTTCACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601133.5
CDS CAA 90 bp TTCCCATTGTCATCTTCCATCATATGCAGGCGAAGTTCTTCAACCTaGTCTCTGAAGCACAGCTTTTCCCCAAGAACCGATCACTTTCTA +
Preference number: 6 (lower is better)
Translates to: FPLSSSIICRRSSST*SLKHSFSPRTDHFL
Trigger: TAGAAAGTGATCGGTTCTTGGGGAAAAGCTGTGCTTCAGAGACAAGGTTGAAGAACTTCGCCTGCATATGATGGAAGATGACAATGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599151.5
CDS CAA 90 bp GGCCTTCCCGGAACCACAAGATTGTCAATGCCAATCAAATCTTTCTaGAGTTCGTGCAGCTTCTGGAAATTCTCCATCTTGATCATCGTA +
Preference number: 6 (lower is better)
Translates to: GLPGTTRLSMPIKSF*SSCSFWKFSILIIV
Trigger: TACGATGATCAAGATGGAGAATTTCCAGAAGCTGCACGAACTCAAGAAAGATTTGATTGGCATTGACAATCTTGTGGTTCCGGGAAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595437.5
ENST00000627049.2
CDS TCA 72 bp AAAATGCATGCAAGAGGCAAAGGAAGAAAGGGGTCCTaGCGATCATCAGCACCTTCTTTACGGAAAGATCAA +
Preference number: 6 (lower is better)
Translates to: KMHARGKGRKGS*RSSAPSLRKDQ
Trigger: TTGATCTTTCCGTAAAGAAGGTGCTGATGATCGTCAGGACCCCTTTCTTCCTTTGCCTCTTGCATGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597777.1
CDS CCA 72 bp ATGCCAATCAAATCTTTCTTGAGTTCGTGCAGCTTCTaGAAATTCTCCATCTTGATCATCGTACCGTGGAGC +
Preference number: 6 (lower is better)
Translates to: MPIKSFLSSCSF*KFSILIIVPWS
Trigger: GCTCCACGGTACGATGATCAAGATGGAGAATTTCCAGAAGCTGCACGAACTCAAGAAAGATTTGATTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000423063.2
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS CCA 72 bp ATTCTGTCCTCTCCAAACTTCTCAATTAGATGTGAATaGTGCTTGGGCTTCATGGAGCATCTCAGTACCCAA +
Preference number: 6 (lower is better)
Translates to: ILSSPNFSIRCE*CLGFMEHLSTQ
Trigger: TTGGGTACTGAGATGCTCCATGAAGCCCAAGCACCATTCACATCTAATTGAGAAGTTTGGAGAGGACAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376581.9
CDS CCA 72 bp ATGGATAAACAGTATGAGGAGGACGATTCCACACACTaGAGGATGATGCAACCTAGGCGAAGTTTAAACTTG +
Preference number: 6 (lower is better)
Translates to: MDKQYEEDDSTH*RMMQPRRSLNL
Trigger: CAAGTTTAAACTTCGCCTAGGTTGCATCATCCTCCAGTGTGTGGAATCGTCCTCCTCATACTGTTTATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598346.5
CDS CAA 72 bp CTCTCTATGGTCATGTCCATTTTCCGAAACATAGCCTaGAGACCCAGTTCTGTCCCAACTCATATTTGGACT +
Preference number: 6 (lower is better)
Translates to: LSMVMSIFRNIA*RPSSVPTHIWT
Trigger: AGTCCAAATATGAGTTGGGACAGAACTGGGTCTCAAGGCTATGTTTCGGAAAATGGACATGACCATAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CAA 72 bp CACTGGAGGATGATGCAACCTAGGCGAAGTTTAAACTaGCAGAATGAACGTGTCACATCACAAGCTGTGATA +
Preference number: 6 (lower is better)
Translates to: HWRMMQPRRSLN*QNERVTSQAVI
Trigger: TATCACAGCTTGTGATGTGACACGTTCATTCTGCAAGTTTAAACTTCGCCTAGGTTGCATCATCCTCCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598346.5
CDS CAA 90 bp TCCCTTCCCGGAACCACAAGATTGTCAATGCCAATCAAATCTTTCTaGAGTTCGTGCAGCTTCTGGAAATTCTCCATCTTGATCATCGTA +
Preference number: 6 (lower is better)
Translates to: SLPGTTRLSMPIKSF*SSCSFWKFSILIIV
Trigger: TACGATGATCAAGATGGAGAATTTCCAGAAGCTGCACGAACTCAAGAAAGATTTGATTGGCATTGACAATCTTGTGGTTCCGGGAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319562.11
CDS CAA 90 bp ACCCTTCCCGGAACCACAAGATTGTCAATGCCAATCAAATCTTTCTaGAGTTCGTGCAGCTTCTGGAAATTCTCCATCTTGATCATCGTA +
Preference number: 6 (lower is better)
Translates to: TLPGTTRLSMPIKSF*SSCSFWKFSILIIV
Trigger: TACGATGATCAAGATGGAGAATTTCCAGAAGCTGCACGAACTCAAGAAAGATTTGATTGGCATTGACAATCTTGTGGTTCCGGGAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423063.2
CDS CAA 90 bp TTGTGTTTTTCCAGTTGTCTCCCAGGTGGATGGAAAGAGGACATTTaGCTTTGCAAGGGTCTCTCTTCAAAAGGTTCAAATGTAAGTCCC +
Preference number: 6 (lower is better)
Translates to: LCFSSCLPGGWKEDI*LCKGLSSKGSNVSP
Trigger: GGGACTTACATTTGAACCTTTTGAAGAGAGACCCTTGCAAAGCAAAATGTCCTCTTTCCATCCACCTGGGAGACAACTGGAAAAACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423063.2
CDS TCA 72 bp ACTTTTCTCCTTGGGCTCAGTGGTCTAATGAAGTCATaGAAGTGCATTCAGCCCACTGAACCTGAATCTTTA +
Preference number: 6 (lower is better)
Translates to: TFLLGLSGLMKS*KCIQPTEPESL
Trigger: TAAAGATTCAGGTTCAGTGGGCTGAATGCACTTTCATGACTTCATTAGACCACTGAGCCCAAGGAGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000427404.5
ENST00000457431.1
ENST00000593990.1
ENST00000595366.5
ENST00000601762.5
CDS TCA 72 bp AAATGCTACCTGGCTAAGGATGAGTGGATCTGTCTCTaGCTTATTACATCTACCAGGAAGATTCCGCATGTA +
Preference number: 6 (lower is better)
Translates to: KCYLAKDEWICL*LITSTRKIPHV
Trigger: TACATGCGGAATCTTCCTGGTAGATGTAATAAGTCAGAGACAGATCCACTCATCCTTAGCCAGGTAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596580.2
CDS CAA 72 bp CTTTTCCCCAAGAACCGATCTAGGCGAAGTTTAAACTaGCAGAATGAACGTGTCACATCACAAGCTGTGATA +
Preference number: 6 (lower is better)
Translates to: LFPKNRSRRSLN*QNERVTSQAVI
Trigger: TATCACAGCTTGTGATGTGACACGTTCATTCTGCAAGTTTAAACTTCGCCTAGATCGGTTCTTGGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000457431.1
ENST00000594657.1
ENST00000595366.5
ENST00000601762.5
CDS CAA 72 bp ATGCAAAATGGTGCAGCCACTAGGCGAAGTTTAAACTaGCAGAATGAACGTGTCACATCACAAGCTGTGATA +
Preference number: 6 (lower is better)
Translates to: MQNGAATRRSLN*QNERVTSQAVI
Trigger: TATCACAGCTTGTGATGTGACACGTTCATTCTGCAAGTTTAAACTTCGCCTAGTGGCTGCACCATTTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602171.5
CDS CAA 90 bp AACCTTCCCGGAACCACAAGATTGTCAATGCCAATCAAATCTTTCTaGAGTTCGTGCAGCTTCTGGAAATTCTCCATCTTGATCATCGTA +
Preference number: 6 (lower is better)
Translates to: NLPGTTRLSMPIKSF*SSCSFWKFSILIIV
Trigger: TACGATGATCAAGATGGAGAATTTCCAGAAGCTGCACGAACTCAAGAAAGATTTGATTGGCATTGACAATCTTGTGGTTCCGGGAAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596256.1
CDS TCA 72 bp TATGAAATTTGTGCAAAGGTTCAAAATTCGGGAATATaGGACTTTTCAGTGCTTCCGGCATGGCGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: YEICAKVQNSGI*DFSVLPAWRPL
Trigger: AAGAGGACGCCATGCCGGAAGCACTGAAAAGTCTCATATTCCCGAATTTTGAACCTTTGCACAAATTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319562.11
ENST00000457029.3
ENST00000595437.5
ENST00000627049.2
CDS TCA 72 bp CAGAAAGGTGAAGACTTTGTAAAACAAAGCCACCAATaGCACCTGTGGTTCCCATTGTCATCTTCCATCATA +
Preference number: 6 (lower is better)
Translates to: QKGEDFVKQSHQ*HLWFPLSSSII
Trigger: TATGATGGAAGATGACAATGGGAACCACAGGTGTCATTGGTGGCTTTGTTTTACAAAGTCTTCACCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427404.5
ENST00000457431.1
ENST00000593990.1
ENST00000594657.1
ENST00000595366.5
ENST00000601762.5
CDS CAA 72 bp GGAACCACAAGATTGTCAATGCCAATCAAATCTTTCTaGAGTTCGTGCAGCTTCTGGAAATTCTCCATCTTG +
Preference number: 6 (lower is better)
Translates to: GTTRLSMPIKSF*SSCSFWKFSIL
Trigger: CAAGATGGAGAATTTCCAGAAGCTGCACGAACTCAAGAAAGATTTGATTGGCATTGACAATCTTGTGGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319562.11
ENST00000423063.2
ENST00000595437.5
ENST00000596256.1
ENST00000627049.2
CDS CAA 72 bp TTGCTCAAAGAGATGCTGTCTAGGCGAAGTTTAAACTaGCAGAATGAACGTGTCACATCACAAGCTGTGATA +
Preference number: 6 (lower is better)
Translates to: LLKEMLSRRSLN*QNERVTSQAVI
Trigger: TATCACAGCTTGTGATGTGACACGTTCATTCTGCAAGTTTAAACTTCGCCTAGACAGCATCTCTTTGAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601656.5
CDS GCA 72 bp AAAGAAAAAGAGTCATGTGCTGAGGTTGCTAAGATCTaGAGTAAGAATAATCTTCCGTCTGGGAAACTTAAA +
Preference number: 6 (lower is better)
Translates to: KEKESCAEVAKI*SKNNLPSGKLK
Trigger: TTTAAGTTTCCCAGACGGAAGATTATTCTTACTGCAGATCTTAGCAACCTCAGCACATGACTCTTTTTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601361.1