Pregenerated sensors for FAR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000197601Ensembl transcript IDs: ENST00000354817.8, ENST00000524933.1, ENST00000532502.1, ENST00000532701.1, ENST00000532769.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACCATTTTGATCCTAGACGCAGAGGCTCAGGCCTCGCTCTCCCACTaGCCGTCCAGCAATAGCTGCGCCGCCGCCGCCGCCGCCGTCGCG | + |
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Preference number: 5 (lower is better) Translates to: TILILDAEAQASLSH*PSSNSCAAAAAAVA Trigger: CGCGACGGCGGCGGCGGCGGCGGCGCAGCTATTGCTGGACGGCCAGTGGGAGAGCGAGGCCTGAGCCTCTGCGTCTAGGATCAAAATGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354817.8 ENST00000532701.1 |
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| CDS TCA 90 bp | CTCTTGTGGTGTCTGTCCAGCTTTCTGCCTCACCAAAACATATACTaGATTCACCTTAGGACAAGACCTCAGCAACTTTTCCAGAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: LLWCLSSFLPHQNIY*IHLRTRPQQLFQKH Trigger: GTGCTTCTGGAAAAGTTGCTGAGGTCTTGTCCTAAGGTGAATTCAGTATATGTTTTGGTGAGGCAGAAAGCTGGACAGACACCACAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000354817.8 ENST00000532701.1 ENST00000532769.1 |
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| CDS CCA 72 bp | ATCCTAGACGCAGAGGCTCAGGCCTCGCTCTCCCACTaGCCGTCCAGCAATAGCTGCGCCGCCGCCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: ILDAEAQASLSH*PSSNSCAAAAA Trigger: GGCGGCGGCGGCGGCGCAGCTATTGCTGGACGGCCAGTGGGAGAGCGAGGCCTGAGCCTCTGCGTCTAGGAT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354817.8 ENST00000532701.1 |
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| CDS CCA 72 bp | AAGCTTGCCACTAAGGACTTCTTCCACTCGCTCTTGTaGTGTCTGTCCAGCTTTCTGCCTCACCAAAACATA | + |
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Preference number: 6 (lower is better) Translates to: KLATKDFFHSLL*CLSSFLPHQNI Trigger: TATGTTTTGGTGAGGCAGAAAGCTGGACAGACACCACAAGAGCGAGTGGAAGAAGTCCTTAGTGGCAAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000354817.8 ENST00000532701.1 ENST00000532769.1 |
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| CDS CAA 72 bp | AAAAAGCTTGCCACTAAGGACTTCTTCCACTCGCTCTaGTGGTGTCTGTCCAGCTTTCTGCCTCACCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: KKLATKDFFHSL*WCLSSFLPHQN Trigger: GTTTTGGTGAGGCAGAAAGCTGGACAGACACCACAAGAGCGAGTGGAAGAAGTCCTTAGTGGCAAGCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000354817.8 ENST00000532701.1 ENST00000532769.1 |
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| CDS GCA 72 bp | TCTTCCACTCGCTCTTGTGGTGTCTGTCCAGCTTTCTaGCTCACCAAAACATATACTGAATTCACCTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSTRSCGVCPAF*LTKTYTEFTLG Trigger: TCCTAAGGTGAATTCAGTATATGTTTTGGTGAGGCAGAAAGCTGGACAGACACCACAAGAGCGAGTGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000354817.8 ENST00000532701.1 ENST00000532769.1 |
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| CDS TCA 72 bp | TGTCTGTCCAGCTTTCTGCCTCACCAAAACATATACTaGATTCACCTTAGGACAAGACCTCAGCAACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: CLSSFLPHQNIY*IHLRTRPQQLF Trigger: GAAAAGTTGCTGAGGTCTTGTCCTAAGGTGAATTCAGTATATGTTTTGGTGAGGCAGAAAGCTGGACAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000354817.8 ENST00000532701.1 ENST00000532769.1 |
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| CDS GCA 72 bp | CCACAGGTGGTGGATAGACTACTTCATCAATATGCTTaGGATTACAGTAGGCATATGCTGTTGATACATGCA | + |
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Preference number: 6 (lower is better) Translates to: PQVVDRLLHQYA*DYSRHMLLIHA Trigger: TGCATGTATCAACAGCATATGCCTACTGTAATCGCAAGCATATTGATGAAGTAGTCTATCCACCACCTGTGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000354817.8 ENST00000524933.1 ENST00000532701.1 |
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| CDS CAA 72 bp | CACCTCTTTATCTTCTTCACTGAGAGCCAGTTTAGGTaGGGTGAGTTCGCTGTTGATTGCTATAATTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: HLFIFFTESQFR*GEFAVDCYNFL Trigger: GAGAAAATTATAGCAATCAACAGCGAACTCACCCAACCTAAACTGGCTCTCAGTGAAGAAGATAAAGAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000354817.8 ENST00000524933.1 ENST00000532701.1 ENST00000532769.1 |
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| CDS TCA 72 bp | TGCGATTACAGTAGGCATATGCTGTTGATACATGCATaGACACTTCCAGATTCTTCATTTGTTGTGCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: CDYSRHMLLIHA*TLPDSSFVVQG Trigger: TCCTTGCACAACAAATGAAGAATCTGGAAGTGTTCATGCATGTATCAACAGCATATGCCTACTGTAATCGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000354817.8 ENST00000524933.1 ENST00000532701.1 |
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| CDS CAA 72 bp | TCACTGAGAGCCAGTTTAGGTTGGGTGAGTTCGCTGTaGATTGCTATAATTTTCTCTCTAAAATCTGGATTT | + |
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Preference number: 6 (lower is better) Translates to: SLRASLGWVSSL*IAIIFSLKSGF Trigger: AAATCCAGATTTTAGAGAGAAAATTATAGCAATCAACAGCGAACTCACCCAACCTAAACTGGCTCTCAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000354817.8 ENST00000524933.1 ENST00000532701.1 ENST00000532769.1 |
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| CDS CAA 72 bp | GGGAATAAGAAATGTAAAACTTTGCACCATCACTCCTaGGTTAAACATACCTTAGAACAGATGTTTATGACT | + |
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Preference number: 6 (lower is better) Translates to: GNKKCKTLHHHS*VKHTLEQMFMT Trigger: AGTCATAAACATCTGTTCTAAGGTATGTTTAACCAAGGAGTGATGGTGCAAAGTTTTACATTTCTTATTCCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532502.1 |
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