Pregenerated sensors for FANCF (Homo sapiens)
Ensembl gene IDs: ENSG00000183161Ensembl transcript IDs: ENST00000327470.6
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTAAGTGGAGTACTTCCAATCACTTCCTCTATCCAGAAAATCCGTaGCACTACATGCCAGCTACTTTGCATATTTATAACTGTTTAATA | + |
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Preference number: 1 (lower is better) Translates to: FKWSTSNHFLYPENP*HYMPATLHIYNCLI Trigger: TATTAAACAGTTATAAATATGCAAAGTAGCTGGCATGTAGTGTCACGGATTTTCTGGATAGAGGAAGTGATTGGAAGTACTCCACTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| 3UTR-3UTR TCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCTATCCAGAAAATCCGTaGCACTACATGCCAGCTACT | + |
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Preference number: 2 (lower is better) Translates to: KQTIANSMALSGVLPITSYPENP*HYMPAT Trigger: AGTAGCTGGCATGTAGTGTCACGGATTTTCTGGATA...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| 3UTR-3UTR CCA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGCATATAAGGCAACTGTaGCCCCAAGGTTGTGATTTA | + |
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Preference number: 2 (lower is better) Translates to: ILLPANLDMDKNILIAVKHIRQL*PQGCDL Trigger: TAAATCACAACCTTGGGGCCACAGTTGCCTTATATG...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| 3UTR TCA 72 bp | TCATTTACATATAAGGCAACTGTGGCCCCAAGGTTGTaGTTTATTAACCTAGTTAACGGCAGAAGCTGCACT | + |
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Preference number: 3 (lower is better) Translates to: SFTYKATVAPRL*FINLVNGRSCT Trigger: AGTGCAGCTTCTGCCGTTAACTAGGTTAATAAATCACAACCTTGGGGCCACAGTTGCCTTATATGTAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| 3UTR-3UTR CAA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGCTGTGCTTTAAACATTaGTCTGTGCGTCAATGCTTT | + |
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Preference number: 3 (lower is better) Translates to: ILLPANLDMDKNILIAVKLCFKH*SVRQCF Trigger: AAAGCATTGACGCACAGACAAATGTTTAAAGCACAG...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| 3UTR CCA 72 bp | TCACTCAAGATTTATCTAGAAAAGTGTACTGACTACTaGAATAATAGTTTACCCCTGGGTTGTACCACAGAA | + |
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Preference number: 3 (lower is better) Translates to: SLKIYLEKCTDY*NNSLPLGCTTE Trigger: TTCTGTGGTACAACCCAGGGGTAAACTATTATTCCAGTAGTCAGTACACTTTTCTAGATAAATCTTGAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| 3UTR CCA 72 bp | AAAAGTGTACTGACTACTGGAATAATAGTTTACCCCTaGGTTGTACCACAGAATGAGAAATTCTACAAGATT | + |
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Preference number: 3 (lower is better) Translates to: KSVLTTGIIVYP*VVPQNEKFYKI Trigger: AATCTTGTAGAATTTCTCATTCTGTGGTACAACCCAGGGGTAAACTATTATTCCAGTAGTCAGTACACTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACGCCGCTCCAGAGCCGTaGGAATGGGGCCATGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYAAPEP*EWGHAD Trigger: GTCGGCATGGCCCCATTCGCACGGCTCTGGAGCGGC...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCTGCCTCCACTGGTTGTaGAGCCGCCGCTCCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: KQTIANSMALSGVLPITSCLHWL*SRRSRA Trigger: GGCTCTGGAGCGGCGGCTGCACAACCAGTGGAGGCA...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR TCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACGCTCCCACAGGCTGCTaGGAAACCTGGCGGGACGCT | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYAPTGC*ETWRDA Trigger: AGCGTCCCGCCAGGTTTCTCAGCAGCCTGTGGGAGC...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCCAGGTGGTAACGAGCTaGATCCCCGAGGGCCCGGTT | + |
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Preference number: 4 (lower is better) Translates to: KQTIANSMALSGVLPITSQVVTS*IPEGPV Trigger: AACCGGGCCCTCGGGGATGCAGCTCGTTACCACCTG...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACTTGAAGCGCAGCATGTaGACCGCAGACCGCCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYLKRSM*TADRRR Trigger: CCGCCGGCGGTCTGCGGTGCACATGCTGCGCTTCAA...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGGCCTTCCCCACCTCCTaGAGACGCTCCAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ILLPANLDMDKNILIAVKAFPTS*RRSSSS Trigger: GCTGCTGCTGGAGCGTCTGCAGGAGGTGGGGAAGGC...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGCCCTCTTGCCTCCACTaGTTGTGCAGCCGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ILLPANLDMDKNILIAVKPSCLH*LCSRRS Trigger: GGAGCGGCGGCTGCACAACCAGTGGAGGCAAGAGGG...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACGTGCGAATGGGGCCATaGCGACCAAAGCGCCGATGG | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYVRMGP*RPKRRW Trigger: CCATCGGCGCTTTGGTCGGCATGGCCCCATTCGCAC...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCCCAAAGCCGCCCTCTTaGCTCCACTGGTTGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KQTIANSMALSGVLPITSPKPPS*LHWLCS Trigger: GCTGCACAACCAGTGGAGGCAAGAGGGCGGCTTTGG...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCCGAGACAAAGGCGGCTaGAACAGCGCCACCGCTATC | + |
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Preference number: 4 (lower is better) Translates to: KQTIANSMALSGVLPITSRDKGG*NSATAI Trigger: GATAGCGGTGGCGCTGTTGCAGCCGCCTTTGTCTCG...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGCCAGAGCCGTGCGAATaGGGCCATGCCGACCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: ILLPANLDMDKNILIAVKPEPCE*GHADQS Trigger: GCTTTGGTCGGCATGGCCCCATTCGCACGGCTCTGG...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGCGGGCCAGGCTCTCTTaGAGTGTCTCCTCATCGGCG | + |
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Preference number: 4 (lower is better) Translates to: ILLPANLDMDKNILIAVKRARLS*SVSSSA Trigger: CGCCGATGAGGAGACACTCCAAGAGAGCCTGGCCCG...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR TCA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGAGCAGGACGTCACAGTaGCCGAGGGCCTGGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: ILLPANLDMDKNILIAVKSRTSQ*PRAWKF Trigger: GAACTTCCAGGCCCTCGGTCACTGTGACGTCCTGCT...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACAGTCAAAAGCCCGGCTaGGAGGGCGCGACAAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYSQKPG*EGATKG Trigger: GCCTTTTGTCGCGCCCTCCCAGCCGGGCTTTTGACT...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCGGAGACAGCGCTGGGTaGCGGCTAGTCACTAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: KQTIANSMALSGVLPITSGDSAG*RLVTKV Trigger: GACTTTAGTGACTAGCCGCCACCCAGCGCTGTCTCC...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR TCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACGACGTAGGTAGTGCTTaGGACCGCCAGAAGCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYDVGSA*DRQKLG Trigger: TCCGAGCTTCTGGCGGTCTCAAGCACTACCTACGTC...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACAGCAGCAGCTCCGCCTaGGTCTTCATCAGAGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYSSSSA*VFIRES Trigger: GGACTCTCTGATGAAGACCCAGGCGGAGCTGCTGCT...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCGGTTCCAACTCTTCTTaGGGCCGACGAGACAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: KQTIANSMALSGVLPITSGSNSS*GRRDKG Trigger: GCCTTTGTCTCGTCGGCCCCAAGAAGAGTTGGAACC...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACTTCCCCAGAAGCCAGTaGACTAGCACTTGGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYFPRSQ*TSTWLP Trigger: GGGGAGCCAAGTGCTAGTCCACTGGCTTCTGGGGAA...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR TCA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGTTCAGGAAGTTGTTCTaGGGCAAGCGCTCCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: ILLPANLDMDKNILIAVKFRKLF*GKRSHR Trigger: CCTGTGGGAGCGCTTGCCTCAGAACAACTTCCTGAA...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACCAGTGGACTAGCACTTaGCTCCCCTCTCCAGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYQWTST*LPSPGD Trigger: ATCACCTGGAGAGGGGAGCCAAGTGCTAGTCCACTG...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR TCA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGTCTCTCTATAGCCATTaGAGCGCAGCATGTGCACCG | + |
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Preference number: 4 (lower is better) Translates to: ILLPANLDMDKNILIAVKSLYSH*SAACAP Trigger: CGGTGCACATGCTGCGCTTCAATGGCTATAGAGAGA...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGAAGCGATCCAGGTGCTaGAGAAGGGATTCCATGAGG | + |
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Preference number: 4 (lower is better) Translates to: ILLPANLDMDKNILIAVKKRSRC*RRDSMR Trigger: CCTCATGGAATCCCTTCTGCAGCACCTGGATCGCTT...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCGAAAAGCGATCCAGGTaGTGCAGAAGGGATTCCATG | + |
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Preference number: 4 (lower is better) Translates to: KQTIANSMALSGVLPITSEKRSR*CRRDSM Trigger: CATGGAATCCCTTCTGCAGCACCTGGATCGCTTTTC...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCTACAGAACTGAGGCCTaGGCTGAGACCCAAAACTTG | + |
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Preference number: 4 (lower is better) Translates to: KQTIANSMALSGVLPITSYRTEA*AETQNL Trigger: CAAGTTTTGGGTCTCAGCGCAGGCCTCAGTTCTGTA...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGTCCCAGGGCACATCTTaGGACTCAGTTCCAACCCAA | + |
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Preference number: 4 (lower is better) Translates to: ILLPANLDMDKNILIAVKSQGTS*DSVPTQ Trigger: TTGGGTTGGAACTGAGTCCCAAGATGTGCCCTGGGA...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACTCTCCAGGTGATTTGTaGATGCCGGGTTCCAACTCT | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYSPGDL*MPGSNS Trigger: AGAGTTGGAACCCGGCATCCACAAATCACCTGGAGA...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACTTTATCTTTCAGAGGTaGAGGGGCCTGACAGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYFIFQR*RGLTEA Trigger: AGCCTCTGTCAGGCCCCTCCACCTCTGAAAGATAAA...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACCAGGTGATTTGTGGATaGCGGGTTCCAACTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYQVICG*RVPTLL Trigger: AAGAAGAGTTGGAACCCGGCATCCACAAATCACCTG...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACTCAAAATCTCCATCCTaGGCTTTACAGGTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYSKSPS*ALQVSR Trigger: CCTGGAGACCTGTAAAGCGCAGGATGGAGATTTTGA...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR TCA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGTATCCAGAAAATCCGTaGCACTACATGCCAGCTACT | + |
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Preference number: 4 (lower is better) Translates to: ILLPANLDMDKNILIAVKYPENP*HYMPAT Trigger: AGTAGCTGGCATGTAGTGTCACGGATTTTCTGGATA...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCGTAATAACACAGCATTaGCTATACAGAACTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: KQTIANSMALSGVLPITSVITQH*LYRTEA Trigger: GGCCTCAGTTCTGTATAGGCAATGCTGTGTTATTAC...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACGTTAACGGCAGAAGCTaGACTAAAACCTGGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYVNGRS*TKTWIF Trigger: GAAGATCCAGGTTTTAGTGCAGCTTCTGCCGTTAAC...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACATCAGAGAGTCCTCCTaGAGATTTGGGTTCTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYIRESS*RFGFSL Trigger: TAGAGAGAACCCAAATCTCCAGGAGGACTCTCTGAT...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACCAGTTCCAACCCAAATaGCTTTCTGAAGGTCATAGT | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYQFQPK*LSEGHS Trigger: ACTATGACCTTCAGAAAGGCATTTGGGTTGGAACTG...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGGCTAACATTAGGCCTTaGTATGGTAGAACTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: ILLPANLDMDKNILIAVKANIRP*YGRTLH Trigger: GTGAAGAGTTCTACCATAGCAAGGCCTAATGTTAGC...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACCATATAAGGCAACTGTaGCCCCAAGGTTGTGATTTA | + |
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Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYHIRQL*PQGCDL Trigger: TAAATCACAACCTTGGGGCCACAGTTGCCTTATATG...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCATAATAGTTTACCCCTaGGTTGTACCACAGAATGAG | + |
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Preference number: 4 (lower is better) Translates to: KQTIANSMALSGVLPITSIIVYP*VVPQNE Trigger: CTCATTCTGTGGTACAACCCAGGGGTAAACTATTAT...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCTTGTCTGTGCGTCAATaGTTTAAAGGGACATACTAT | + |
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Preference number: 4 (lower is better) Translates to: KQTIANSMALSGVLPITSLSVRQ*FKGTYY Trigger: ATAGTATGTCCCTTTAAAGCATTGACGCACAGACAA...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCCTTCCACTTTCATGTTaGTTTTGTTTATACCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQTIANSMALSGVLPITSLPLSC*FCLYPW Trigger: CCAAGGGTATAAACAAAAGCAACATGAAAGTGGAAG...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACTTCCATGGCTTTAAGTaGAGTACTTCCAATCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYFHGFK*STSNHF Trigger: GAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAA...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR TCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACAAAAATTCACGCAACTaGCAGGAGGAATTGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYKNSRN*QEELSL Trigger: TAAAGACAATTCCTCCTGTCAGTTGCGTGAATTTTT...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCAGCTGCACTAAAACCTaGATCTTCTACTTAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: KQTIANSMALSGVLPITSSCTKT*IFYLKC Trigger: ACATTTTAAGTAGAAGATCCAGGTTTTAGTGCAGCT...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACAAGTGTACTGACTACTaGAATAATAGTTTACCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYKCTDY*NNSLPL Trigger: CAGGGGTAAACTATTATTCCAGTAGTCAGTACACTT...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR GCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACCAAAAATATCTTGATTaGTGTAAAGGTCTATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYQKYLD*CKGLSP Trigger: GGGAGATAGACCTTTACAGCAATCAAGATATTTTTG...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACTCTTACCAGCTAACCTaGATATGGACAAAAATATCT | + |
|
Preference number: 4 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYSYQLT*IWTKIS Trigger: AGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGA...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| 3UTR CAA 72 bp | CTCTTACCAGCTAACCTGGATATGGACAAAAATATCTaGATTGCTGTAAAGGTCTATCTCCCTAGTAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLPANLDMDKNI*IAVKVYLPSKN Trigger: ATTTTTACTAGGGAGATAGACCTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CCA 90 bp | ATGTGCACCGCAGACCGCCGGCGGGCAAGGCGGGCCAGGCTCTCTTaGAGTGTCTCCTCATCGGCGTCCCGGACGCCCGGGCCGGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: MCTADRRRARRARLS*SVSSSASRTPGPGK Trigger: CTTTCCCGGCCCGGGCGTCCGGGACGCCGATGAGGAGACACTCCAAGAGAGCCTGGCCCGCCTTGCCCGCCGGCGGTCTGCGGTGCACAT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
||
| CDS GCA 90 bp | GGAACTGGACCCCGCCCAAAGCCGCCCTCTTGCCTCCACTGGTTGTaGAGCCGCCGCTCCAGAGCCGTGCGAATGGGGCCATGCCGACCA | + |
|
Preference number: 5 (lower is better) Translates to: GTGPRPKPPSCLHWL*SRRSRAVRMGPCRP Trigger: TGGTCGGCATGGCCCCATTCGCACGGCTCTGGAGCGGCGGCTGCACAACCAGTGGAGGCAAGAGGGCGGCTTTGGGCGGGGTCCAGTTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS GCA 90 bp | GACGCCCGGGCCGGGAAAGAGTTGCTGCACCAGGTGGTAACGAGCTaGATCCCCGAGGGCCCGGTTCTCCAGCAGGCGCAGAGAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DARAGKELLHQVVTS*IPEGPVLQQAQREQ Trigger: CTGCTCTCTCTGCGCCTGCTGGAGAACCGGGCCCTCGGGGATGCAGCTCGTTACCACCTGGTGCAGCAACTCTTTCCCGGCCCGGGCGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CCA 90 bp | AATCCCGGAACTGGACCCCGCCCAAAGCCGCCCTCTTGCCTCCACTaGTTGTGCAGCCGCCGCTCCAGAGCCGTGCGAATGGGGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: NPGTGPRPKPPSCLH*LCSRRSRAVRMGPC Trigger: GCATGGCCCCATTCGCACGGCTCTGGAGCGGCGGCTGCACAACCAGTGGAGGCAAGAGGGCGGCTTTGGGCGGGGTCCAGTTCCGGGATT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CCA 90 bp | CTTGCCTCCACTGGTTGTGCAGCCGCCGCTCCAGAGCCGTGCGAATaGGGCCATGCCGACCAAAGCGCCGATGGATGTGGCGCAGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LASTGCAAAAPEPCE*GHADQSADGCGAGS Trigger: GCTACCTGCGCCACATCCATCGGCGCTTTGGTCGGCATGGCCCCATTCGCACGGCTCTGGAGCGGCGGCTGCACAACCAGTGGAGGCAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS TCA 90 bp | AGGGCCCGGTTCTCCAGCAGGCGCAGAGAGAGCAGGACGTCACAGTaGCCGAGGGCCTGGAAGTTCGCTAATCCCGGAACTGGACCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RARFSSRRRESRTSQ*PRAWKFANPGTGPR Trigger: GCGGGGTCCAGTTCCGGGATTAGCGAACTTCCAGGCCCTCGGTCACTGTGACGTCCTGCTCTCTCTGCGCCTGCTGGAGAACCGGGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS TCA 90 bp | CCGGCGCACGGTGGCGGGGTCCCAGGTGCTGACGTAGGTAGTGCTTaGGACCGCCAGAAGCTCGGAAAAGCGATCCAGGTGCTGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PAHGGGVPGADVGSA*DRQKLGKAIQVLQK Trigger: CTTCTGCAGCACCTGGATCGCTTTTCCGAGCTTCTGGCGGTCTCAAGCACTACCTACGTCAGCACCTGGGACCCCGCCACCGTGCGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS GCA 90 bp | AAGTTCGCTAATCCCGGAACTGGACCCCGCCCAAAGCCGCCCTCTTaGCTCCACTGGTTGTGCAGCCGCCGCTCCAGAGCCGTGCGAATG | + |
|
Preference number: 5 (lower is better) Translates to: KFANPGTGPRPKPPS*LHWLCSRRSRAVRM Trigger: CATTCGCACGGCTCTGGAGCGGCGGCTGCACAACCAGTGGAGGCAAGAGGGCGGCTTTGGGCGGGGTCCAGTTCCGGGATTAGCGAACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS TCA 90 bp | GGCGGCTGCAACAGCGCCACCGCTATCACCTTCAGGAAGTTGTTCTaGGGCAAGCGCTCCCACAGGCTGCTGAGAAACCTGGCGGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: GGCNSATAITFRKLF*GKRSHRLLRNLAGR Trigger: GCGTCCCGCCAGGTTTCTCAGCAGCCTGTGGGAGCGCTTGCCTCAGAACAACTTCCTGAAGGTGATAGCGGTGGCGCTGTTGCAGCCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS TCA 90 bp | TCACCTTCAGGAAGTTGTTCTGAGGCAAGCGCTCCCACAGGCTGCTaGGAAACCTGGCGGGACGCTCCGCTTCGGCCTTCCCCACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPSGSCSEASAPTGC*ETWRDAPLRPSPPP Trigger: AGGAGGTGGGGAAGGCCGAAGCGGAGCGTCCCGCCAGGTTTCTCAGCAGCCTGTGGGAGCGCTTGCCTCAGAACAACTTCCTGAAGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CCA 90 bp | CTCCCCTCTCCAGGTGATTTGTGGATGCCGGGTTCCAACTCTTCTTaGGGCCGACGAGACAAAGGCGGCTGCAACAGCGCCACCGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: LPSPGDLWMPGSNSS*GRRDKGGCNSATAI Trigger: GATAGCGGTGGCGCTGTTGCAGCCGCCTTTGTCTCGTCGGCCCCAAGAAGAGTTGGAACCCGGCATCCACAAATCACCTGGAGAGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS TCA 90 bp | TCATCAGAGAGTCCTCCTGGAGATTTGGGTTCTCTCTATAGCCATTaGAGCGCAGCATGTGCACCGCAGACCGCCGGCGGGCAAGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSESPPGDLGSLYSH*SAACAPQTAGGQGG Trigger: CCCGCCTTGCCCGCCGGCGGTCTGCGGTGCACATGCTGCGCTTCAATGGCTATAGAGAGAACCCAAATCTCCAGGAGGACTCTCTGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CCA 90 bp | CAGCAGCTCCGCCTGGGTCTTCATCAGAGAGTCCTCCTGGAGATTTaGGTTCTCTCTATAGCCATTGAAGCGCAGCATGTGCACCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QQLRLGLHQRVLLEI*VLSIAIEAQHVHRR Trigger: TCTGCGGTGCACATGCTGCGCTTCAATGGCTATAGAGAGAACCCAAATCTCCAGGAGGACTCTCTGATGAAGACCCAGGCGGAGCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CCA 90 bp | GCAGCAAAGACTTCCGAATTCCCCAGAAGCCAGTGGACTAGCACTTaGCTCCCCTCTCCAGGTGATTTGTGGATGCCGGGTTCCAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAKTSEFPRSQWTST*LPSPGDLWMPGSNS Trigger: AGAGTTGGAACCCGGCATCCACAAATCACCTGGAGAGGGGAGCCAAGTGCTAGTCCACTGGCTTCTGGGGAATTCGGAAGTCTTTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS GCA 90 bp | GCAACTCCTCCCAGGGCACATCTTGGGACTCAGTTCCAACCCAAATaGCTTTCTGAAGGTCATAGTGCAAACGTTGACCCCAGTCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ATPPRAHLGTQFQPK*LSEGHSANVDPSLL Trigger: TAACAGACTGGGGTCAACGTTTGCACTATGACCTTCAGAAAGGCATTTGGGTTGGAACTGAGTCCCAAGATGTGCCCTGGGAGGAGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCGCGGGCCAGGCTCTCTaGGAGTGTCTCCTCATCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KQTIANSMALSGVLPITSAGQAL*ECLLIG Trigger: GCCGATGAGGAGACACTCCAAGAGAGCCTGGCCCGC...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCTCTTGCCTCCACTGGTaGTGCAGCCGCCGCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KQTIANSMALSGVLPITSSCLHW*CSRRSR Trigger: TCTGGAGCGGCGGCTGCACAACCAGTGGAGGCAAGA...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCCGGGCCGGGAAAGAGTaGCTGCACCAGGTGGTAACG | + |
|
Preference number: 5 (lower is better) Translates to: KQTIANSMALSGVLPITSRAGKE*LHQVVT Trigger: CGTTACCACCTGGTGCAGCAACTCTTTCCCGGCCCG...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACCCCAAAGCCGCCCTCTaGCCTCCACTGGTTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYPKAAL*PPLVVQ Trigger: CTGCACAACCAGTGGAGGCAAGAGGGCGGCTTTGGG...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCCTCCCAGGGCACATCTaGGGACTCAGTTCCAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: KQTIANSMALSGVLPITSLPGHI*GLSSNP Trigger: TGGGTTGGAACTGAGTCCCAAGATGTGCCCTGGGAG...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS GCA 90 bp | AGGTCTGTCCAGATGCTAAGACCAGGTACTTCAAAATCTCCATCCTaGGCTTTACAGGTCTCCAGGGCAGTTAGAACTTTATCTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSVQMLRPGTSKSPS*ALQVSRAVRTLSFR Trigger: TCTGAAAGATAAAGTTCTAACTGCCCTGGAGACCTGTAAAGCGCAGGATGGAGATTTTGAAGTACCTGGTCTTAGCATCTGGACAGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACGGGTTCCAACTCTTCTaGGGGCCGACGAGACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYGFQLF*GPTRQR Trigger: CCTTTGTCTCGTCGGCCCCAAGAAGAGTTGGAACCC...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACCCCTCTCCAGGTGATTaGTGGATGCCGGGTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYPSPGD*WMPGSN Trigger: GTTGGAACCCGGCATCCACAAATCACCTGGAGAGGG...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCGAGGCTGAGTCAGAATaGCTTGATCCTGGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KQTIANSMALSGVLPITSEAESE*LDPGRQ Trigger: CTGCCTCCCAGGATCAAGCAATTCTGACTCAGCCTC...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGCTGAGTCAGAATTGCTaGATCCTGGGAGGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ILLPANLDMDKNILIAVKLSQNC*ILGGRG Trigger: ACCTCTGCCTCCCAGGATCAAGCAATTCTGACTCAG...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS GCA 90 bp | TATATTCAAGTAATAACACAGCATTGCCTATACAGAACTGAGGCCTaGGCTGAGACCCAAAACTTGTCTTTTCCTAAATGCACCACTACG | + |
|
Preference number: 5 (lower is better) Translates to: YIQVITQHCLYRTEA*AETQNLSFPKCTTT Trigger: CGTAGTGGTGCATTTAGGAAAAGACAAGTTTTGGGTCTCAGCGCAGGCCTCAGTTCTGTATAGGCAATGCTGTGTTATTACTTGAATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACGGCCTGACAGAGGCTTaGAAACCTATTGTGCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYGLTEA*KPIVQL Trigger: GAGTTGCACAATAGGTTTCAAAGCCTCTGTCAGGCC...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGAGTCCTCCTGGAGATTaGGGTTCTCTCTATAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ILLPANLDMDKNILIAVKSPPGD*GSLYSH Trigger: ATGGCTATAGAGAGAACCCAAATCTCCAGGAGGACT...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACCTTCTACTTAAAATGTaGTTTTGGCCAGGCGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYLLLKM*FWPGAV Trigger: CACCGCGCCTGGCCAAAACAACATTTTAAGTAGAAG...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGGCTGAGACCCAAAACTaGTCTTTTCCTAAATGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ILLPANLDMDKNILIAVKAETQN*SFPKCT Trigger: GGTGCATTTAGGAAAAGACAAGTTTTGGGTCTCAGC...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | AAGCAAACTATTGCTAATTCCATGGCTTTAAGTGGAGTACTTCCAATCACTTCCCTGTGCTTTAAACATTaGTCTGTGCGTCAATGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KQTIANSMALSGVLPITSLCFKH*SVRQCF Trigger: AAAGCATTGACGCACAGACAAATGTTTAAAGCACAG...GGAAGTGATTGGAAGTACTCCACTTAAAGCCATGGAATTAGCAATAGTTTGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS-3UTR CAA 90 bp | CTTTTCAAACCAATATTCCTGACACTGCCAGGAATAAAGAAAACTCTTCACTACGCTTCCACTTTCATGTaGCTTTTGTTTATACCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFKPIFLTLPGIKKTLHYASTFM*LLFIPL Trigger: CAAGGGTATAAACAAAAGCAACATGAAAGTGGAAGC...GTAGTGAAGAGTTTTCTTTATTCCTGGCAGTGTCAGGAATATTGGTTTGAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327470.6 |
||
| CDS-3UTR CAA 90 bp | ATCCTCTTACCAGCTAACCTGGATATGGACAAAAATATCTTGATTGCTGTAAAGACTTTCATGTTGCTTTaGTTTATACCCTTGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: ILLPANLDMDKNILIAVKTFMLL*FIPLGI Trigger: AATGCCCAAGGGTATAAACAAAAGCAACATGAAAGT...CTTTACAGCAATCAAGATATTTTTGTCCATATCCAGGTTAGCTGGTAAGAGGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327470.6 |
||
| CDS CCA 72 bp | GCAGACCGCCGGCGGGCAAGGCGGGCCAGGCTCTCTTaGAGTGTCTCCTCATCGGCGTCCCGGACGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ADRRRARRARLS*SVSSSASRTPG Trigger: CCCGGGCGTCCGGGACGCCGATGAGGAGACACTCCAAGAGAGCCTGGCCCGCCTTGCCCGCCGGCGGTCTGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
||
| CDS CAA 90 bp | CATGTGCACCGCAGACCGCCGGCGGGCAAGGCGGGCCAGGCTCTCTaGGAGTGTCTCCTCATCGGCGTCCCGGACGCCCGGGCCGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: HVHRRPPAGKAGQAL*ECLLIGVPDARAGK Trigger: TTTCCCGGCCCGGGCGTCCGGGACGCCGATGAGGAGACACTCCAAGAGAGCCTGGCCCGCCTTGCCCGCCGGCGGTCTGCGGTGCACATG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
||
| CDS GCA 72 bp | CCCCGCCCAAAGCCGCCCTCTTGCCTCCACTGGTTGTaGAGCCGCCGCTCCAGAGCCGTGCGAATGGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRPKPPSCLHWL*SRRSRAVRMGP Trigger: TGGCCCCATTCGCACGGCTCTGGAGCGGCGGCTGCACAACCAGTGGAGGCAAGAGGGCGGCTTTGGGCGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CAA 72 bp | GGACCCCGCCCAAAGCCGCCCTCTTGCCTCCACTGGTaGTGCAGCCGCCGCTCCAGAGCCGTGCGAATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPRPKPPSCLHW*CSRRSRAVRMG Trigger: CCCCATTCGCACGGCTCTGGAGCGGCGGCTGCACAACCAGTGGAGGCAAGAGGGCGGCTTTGGGCGGGGTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
||
| CDS CAA 90 bp | CCCGGAACTGGACCCCGCCCAAAGCCGCCCTCTTGCCTCCACTGGTaGTGCAGCCGCCGCTCCAGAGCCGTGCGAATGGGGCCATGCCGA | + |
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Preference number: 6 (lower is better) Translates to: PGTGPRPKPPSCLHW*CSRRSRAVRMGPCR Trigger: TCGGCATGGCCCCATTCGCACGGCTCTGGAGCGGCGGCTGCACAACCAGTGGAGGCAAGAGGGCGGCTTTGGGCGGGGTCCAGTTCCGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CAA 90 bp | GAGTGTCTCCTCATCGGCGTCCCGGACGCCCGGGCCGGGAAAGAGTaGCTGCACCAGGTGGTAACGAGCTGCATCCCCGAGGGCCCGGTT | + |
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Preference number: 6 (lower is better) Translates to: ECLLIGVPDARAGKE*LHQVVTSCIPEGPV Trigger: AACCGGGCCCTCGGGGATGCAGCTCGTTACCACCTGGTGCAGCAACTCTTTCCCGGCCCGGGCGTCCGGGACGCCGATGAGGAGACACTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS GCA 72 bp | AATCCCGGAACTGGACCCCGCCCAAAGCCGCCCTCTTaGCTCCACTGGTTGTGCAGCCGCCGCTCCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: NPGTGPRPKPPS*LHWLCSRRSRA Trigger: GGCTCTGGAGCGGCGGCTGCACAACCAGTGGAGGCAAGAGGGCGGCTTTGGGCGGGGTCCAGTTCCGGGATT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CAA 72 bp | CTCATCGGCGTCCCGGACGCCCGGGCCGGGAAAGAGTaGCTGCACCAGGTGGTAACGAGCTGCATCCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: LIGVPDARAGKE*LHQVVTSCIPE Trigger: CTCGGGGATGCAGCTCGTTACCACCTGGTGCAGCAACTCTTTCCCGGCCCGGGCGTCCGGGACGCCGATGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS GCA 72 bp | GCCGGGAAAGAGTTGCTGCACCAGGTGGTAACGAGCTaGATCCCCGAGGGCCCGGTTCTCCAGCAGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: AGKELLHQVVTS*IPEGPVLQQAQ Trigger: CTGCGCCTGCTGGAGAACCGGGCCCTCGGGGATGCAGCTCGTTACCACCTGGTGCAGCAACTCTTTCCCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CCA 72 bp | ACTGGTTGTGCAGCCGCCGCTCCAGAGCCGTGCGAATaGGGCCATGCCGACCAAAGCGCCGATGGATGTGGC | + |
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Preference number: 6 (lower is better) Translates to: TGCAAAAPEPCE*GHADQSADGCG Trigger: GCCACATCCATCGGCGCTTTGGTCGGCATGGCCCCATTCGCACGGCTCTGGAGCGGCGGCTGCACAACCAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS TCA 72 bp | GGAAGTTGTTCTGAGGCAAGCGCTCCCACAGGCTGCTaGGAAACCTGGCGGGACGCTCCGCTTCGGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GSCSEASAPTGC*ETWRDAPLRPS Trigger: GGAAGGCCGAAGCGGAGCGTCCCGCCAGGTTTCTCAGCAGCCTGTGGGAGCGCTTGCCTCAGAACAACTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CCA 72 bp | CCAGGTGATTTGTGGATGCCGGGTTCCAACTCTTCTTaGGGCCGACGAGACAAAGGCGGCTGCAACAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: PGDLWMPGSNSS*GRRDKGGCNSA Trigger: GGCGCTGTTGCAGCCGCCTTTGTCTCGTCGGCCCCAAGAAGAGTTGGAACCCGGCATCCACAAATCACCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS TCA 72 bp | TTCTCCAGCAGGCGCAGAGAGAGCAGGACGTCACAGTaGCCGAGGGCCTGGAAGTTCGCTAATCCCGGAACT | + |
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Preference number: 6 (lower is better) Translates to: FSSRRRESRTSQ*PRAWKFANPGT Trigger: AGTTCCGGGATTAGCGAACTTCCAGGCCCTCGGTCACTGTGACGTCCTGCTCTCTCTGCGCCTGCTGGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS TCA 72 bp | AGTCCTCCTGGAGATTTGGGTTCTCTCTATAGCCATTaGAGCGCAGCATGTGCACCGCAGACCGCCGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: SPPGDLGSLYSH*SAACAPQTAGG Trigger: CCCGCCGGCGGTCTGCGGTGCACATGCTGCGCTTCAATGGCTATAGAGAGAACCCAAATCTCCAGGAGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CAA 90 bp | CCCAGAAGCCAGTGGACTAGCACTTGGCTCCCCTCTCCAGGTGATTaGTGGATGCCGGGTTCCAACTCTTCTTGGGGCCGACGAGACAAA | + |
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Preference number: 6 (lower is better) Translates to: PRSQWTSTWLPSPGD*WMPGSNSSWGRRDK Trigger: TTTGTCTCGTCGGCCCCAAGAAGAGTTGGAACCCGGCATCCACAAATCACCTGGAGAGGGGAGCCAAGTGCTAGTCCACTGGCTTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS GCA 72 bp | TCCAACTCTTCTTGGGGCCGACGAGACAAAGGCGGCTaGAACAGCGCCACCGCTATCACCTTCAGGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SNSSWGRRDKGG*NSATAITFRKL Trigger: CAACTTCCTGAAGGTGATAGCGGTGGCGCTGTTGCAGCCGCCTTTGTCTCGTCGGCCCCAAGAAGAGTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS TCA 72 bp | AACAGCGCCACCGCTATCACCTTCAGGAAGTTGTTCTaGGGCAAGCGCTCCCACAGGCTGCTGAGAAACCTG | + |
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Preference number: 6 (lower is better) Translates to: NSATAITFRKLF*GKRSHRLLRNL Trigger: CAGGTTTCTCAGCAGCCTGTGGGAGCGCTTGCCTCAGAACAACTTCCTGAAGGTGATAGCGGTGGCGCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CCA 72 bp | ACTTCCGAATTCCCCAGAAGCCAGTGGACTAGCACTTaGCTCCCCTCTCCAGGTGATTTGTGGATGCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: TSEFPRSQWTST*LPSPGDLWMPG Trigger: ACCCGGCATCCACAAATCACCTGGAGAGGGGAGCCAAGTGCTAGTCCACTGGCTTCTGGGGAATTCGGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CCA 72 bp | CGCCTGGGTCTTCATCAGAGAGTCCTCCTGGAGATTTaGGTTCTCTCTATAGCCATTGAAGCGCAGCATGTG | + |
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Preference number: 6 (lower is better) Translates to: RLGLHQRVLLEI*VLSIAIEAQHV Trigger: CACATGCTGCGCTTCAATGGCTATAGAGAGAACCCAAATCTCCAGGAGGACTCTCTGATGAAGACCCAGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS CAA 72 bp | TTTATCTTTCAGAGGTGGAGGGGCCTGACAGAGGCTTaGAAACCTATTGTGCAACTCCTCCCAGGGCACATC | + |
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Preference number: 6 (lower is better) Translates to: FIFQRWRGLTEA*KPIVQLLPGHI Trigger: GATGTGCCCTGGGAGGAGTTGCACAATAGGTTTCAAAGCCTCTGTCAGGCCCCTCCACCTCTGAAAGATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS GCA 72 bp | GTAATAACACAGCATTGCCTATACAGAACTGAGGCCTaGGCTGAGACCCAAAACTTGTCTTTTCCTAAATGC | + |
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Preference number: 6 (lower is better) Translates to: VITQHCLYRTEA*AETQNLSFPKC Trigger: GCATTTAGGAAAAGACAAGTTTTGGGTCTCAGCGCAGGCCTCAGTTCTGTATAGGCAATGCTGTGTTATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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| CDS GCA 72 bp | AACTATATATTCTATATTCAAGTAATAACACAGCATTaGCTATACAGAACTGAGGCCTGCGCTGAGACCCAA | + |
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Preference number: 6 (lower is better) Translates to: NYIFYIQVITQH*LYRTEACAETQ Trigger: TTGGGTCTCAGCGCAGGCCTCAGTTCTGTATAGGCAATGCTGTGTTATTACTTGAATATAGAATATATAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327470.6 |
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